RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DIP2A (Homo sapiens)

Ensembl gene IDs: ENSG00000160305

Ensembl transcript IDs: ENST00000400274.5, ENST00000417564.3, ENST00000435722.7, ENST00000457905.7, ENST00000466639.5, ENST00000472364.1, ENST00000473752.5, ENST00000478105.5, ENST00000479654.1, ENST00000480553.1, ENST00000481883.1, ENST00000494435.5, ENST00000651436.1

Found 1419 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTCCCGGTGAGTaGGCTCTGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGG +
Preference number: 1 (lower is better)
Translates to: LRGICKSTGRASPGE*ALRCLPTSHLGLLG
Trigger: CCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCAGAGCTCACTCACCGGGACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR GCA 90 bp GGATCTGTAAGAGCACAGGAAGGGCGAGTCCCGGTGAGTGAGCTCTaGGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTC +
Preference number: 1 (lower is better)
Translates to: GSVRAQEGRVPVSEL*GVFPHHTLDCWGSF
Trigger: GAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCAGAGCTCACTCACCGGGACTCGCCCTTCCTGTGCTCTTACAGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR GCA 90 bp AAAGCAGTGAAGAATGTAACCATCTCCACCTTCAATACGGGGCAATaGTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAA +
Preference number: 1 (lower is better)
Translates to: KAVKNVTISTFNTGQ*CSLLPSTVLPVLTK
Trigger: TTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATTCTTCACTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR GCA 90 bp ATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTaGACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGG +
Preference number: 1 (lower is better)
Translates to: IFRLCEFKFAGLSIY*TKTSRAANEGIYSR
Trigger: CCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
3UTR TCA 90 bp AGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTaGTCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCA +
Preference number: 1 (lower is better)
Translates to: SQTHVWRINNSFVRH*SRLILEKPGCFCEA
Trigger: TGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGATCAGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR TCA 90 bp TCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTTATTaGGTGTCCGTGACAATACATGCTGACAAGCAGCACACCTCTTTT +
Preference number: 1 (lower is better)
Translates to: SETKHLNLTVQNGTY*VSVTIHADKQHTSF
Trigger: AAAAGAGGTGTGCTGCTTGTCAGCATGTATTGTCACGGACACTCAATAAGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR GCA 90 bp TTAAAAATCAGGAACTATATTTTTAGCCTAAAGAAAGTGCAAACTTaGAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACAA +
Preference number: 1 (lower is better)
Translates to: LKIRNYIFSLKKVQT*STAENNLGACDSSQ
Trigger: TTGTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTTTCTTTAGGCTAAAAATATAGTTCCTGATTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR CCA 90 bp GTTTGTACTCTGCTATCTTCCCAGAATCAAGTTTCTCCCCGTAAATaGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCATT +
Preference number: 1 (lower is better)
Translates to: VCTLLSSQNQVSPRK*SQVSPVNSIYELVI
Trigger: AATGACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATTCTGGGAAGATAGCAGAGTACAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR CAA 90 bp CGAGTCCCGGTGAGTGAGCTCTGCGGTGTCTTCCCACATCACACCTaGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCCGGTGTG +
Preference number: 2 (lower is better)
Translates to: RVPVSELCGVFPHHT*DCWGSFISGTWAGV
Trigger: CACACCGGCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCAGAGCTCACTCACCGGGACTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR TCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACGCGAGTCCCGGTGAGTaGGCTCTGCGGTGTCTTCCC +
Preference number: 2 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHASPGE*ALRCLP
Trigger: GGGAAGACACCGCAGAGCTCACTCACCGGGACTCGC...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR TCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGAAGGGCGAGTCCCGGTaGGTGAGCTCTGCGGTGTCT +
Preference number: 2 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQKGESR*VSSAVS
Trigger: AGACACCGCAGAGCTCACTCACCGGGACTCGCCCTT...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR GCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTCCTGACCTCGTGATCTaGTCGCCTCGGCCTCCCAAA +
Preference number: 2 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTPDLVI*SPRPPK
Trigger: TTTGGGAGGCCGAGGCGAGCAGATCACGAGGTCAGG...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR TCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTTGGAGTGCAGTAGCGTaGTCTCGGCTCACTGCAAGC +
Preference number: 2 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTWSAVA*SRLTAS
Trigger: GCTTGCAGTGAGCCGAGATCACGCTACTGCACTCCA...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR TCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTCAACCTCGGTGCCTGTaGTTCCTCACAATGCCCATG +
Preference number: 2 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTQPRCL*FLTMPM
Trigger: CATGGGCATTGTGAGGAATCACAGGCACCGAGGTTG...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR GCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTCATCACACCTTGGACTaGTGGGGCTCATTCATCTCC +
Preference number: 2 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTHHTLD*WGSFIS
Trigger: GGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATG...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR CCA 90 bp TTTGCAATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGCAACCACTTGGCACTTaGAGTGGAGTGGGGGTGCCA +
Preference number: 2 (lower is better)
Translates to: FAMKNTDKQSWSQGGPGGQPLGT*SGVGVP
Trigger: TGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTG...CCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCATTGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457905.7
3UTR-3UTR TCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACACAACCTCGGTGCCTGTaGTTCCTCACAATGCCCATG +
Preference number: 2 (lower is better)
Translates to: STPLSIKELAEEALCVTTQPRCL*FLTMPM
Trigger: CATGGGCATTGTGAGGAATCACAGGCACCGAGGTTG...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR GCA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCACATCACACCTTGGACTaGTGGGGCTCATTCATCTCC +
Preference number: 2 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSHHTLD*WGSFIS
Trigger: GGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATG...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR GCA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACCTGACCTCGTGATCTaGTCGCCTCGGCCTCCCAAA +
Preference number: 2 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLPDLVI*SPRPPK
Trigger: TTTGGGAGGCCGAGGCGAGCAGATCACGAGGTCAGG...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR TCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGAGATGCGGGGATTGTTaGGAGGGATCTGTAAGAGCA +
Preference number: 2 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQRCGDC*EGSVRA
Trigger: TGCTCTTACAGATCCCTCTCAACAATCCCCGCATCT...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR GCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAGGATGGGTCCAGCTTaGTTCCTTTTTCCATCAGCC +
Preference number: 2 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHRMGPA*FLFPSA
Trigger: GGCTGATGGAAAAAGGAAGCAAGCTGGACCCATCCT...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR CCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTCACACCTTGGACTGCTaGGGCTCATTCATCTCCGGC +
Preference number: 2 (lower is better)
Translates to: VCHNILYHSPTPWGNRATHTLDC*GSFISG
Trigger: GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTG...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR TCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGAAGGGCGAGTCCCGGTaGGTGAGCTCTGCGGTGTCT +
Preference number: 2 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMKGESR*VSSAVS
Trigger: AGACACCGCAGAGCTCACTCACCGGGACTCGCCCTT...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR TCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTCCATCAGCCTCCCTGTaGAACAGAAGTGAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: VCHNILYHSPTPWGNRATPSASL*NRSEAA
Trigger: AGCTGCCTCACTTCTGTTTCACAGGGAGGCTGATGG...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR GCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAAGGATGGGTCCAGCTTaGTTCCTTTTTCCATCAGCC +
Preference number: 2 (lower is better)
Translates to: STPLSIKELAEEALCVTTRMGPA*FLFPSA
Trigger: GGCTGATGGAAAAAGGAAGCAAGCTGGACCCATCCT...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR GCA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTAGGCAATGCTGTTCCCTaGTCCCCTCAACTGTACTGC +
Preference number: 2 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLGNAVP*SPQLYC
Trigger: GCAGTACAGTTGAGGGGAGCAGGGAACAGCATTGCC...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR CCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTGTTTCTCCCCGTAAATaGTCTCAAGTTTCTCCCGTA +
Preference number: 2 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTVSPRK*SQVSPV
Trigger: TACGGGAGAAACTTGAGACCATTTACGGGGAGAAAC...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR TCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTGCGAGTCCCGGTGAGTaGGCTCTGCGGTGTCTTCCC +
Preference number: 2 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTASPGE*ALRCLP
Trigger: GGGAAGACACCGCAGAGCTCACTCACCGGGACTCGC...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR TCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTCCATCAGCCTCCCTGTaGAACAGAAGTGAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: AQLARLMCGELITALLGTPSASL*NRSEAA
Trigger: AGCTGCCTCACTTCTGTTTCACAGGGAGGCTGATGG...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR GCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACCATCACACCTTGGACTaGTGGGGCTCATTCATCTCC +
Preference number: 2 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHHHTLD*WGSFIS
Trigger: GGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATG...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR GCA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCAGCTGGTTTGTACTCTaGTATCTTCCCAGAATCAAG +
Preference number: 2 (lower is better)
Translates to: ASTPLSIKELAEEALCVTSWFVL*YLPRIK
Trigger: CTTGATTCTGGGAAGATAGCAGAGTACAAACCAGCT...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR GCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTTCCCCTCAACTGTACTaGCGGTACTCACCAAACAGC +
Preference number: 2 (lower is better)
Translates to: VCHNILYHSPTPWGNRATSPQLY*RYSPNS
Trigger: GCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGA...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR CCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTTCCCACATCACACCTTaGACTGCTGGGGCTCATTCA +
Preference number: 2 (lower is better)
Translates to: VCHNILYHSPTPWGNRATSHITP*TAGAHS
Trigger: TGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGA...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR TCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGTGGAGTGCAGTAGCGTaGTCTCGGCTCACTGCAAGC +
Preference number: 2 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMWSAVA*SRLTAS
Trigger: GCTTGCAGTGAGCCGAGATCACGCTACTGCACTCCA...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR TCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTCAAAATGGCACTTATTaGGTGTCCGTGACAATACAT +
Preference number: 2 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTQNGTY*VSVTIH
Trigger: ATGTATTGTCACGGACACTCAATAAGTGCCATTTTG...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR GCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTTCCCCTCAACTGTACTaGCGGTACTCACCAAACAGC +
Preference number: 2 (lower is better)
Translates to: AQLARLMCGELITALLGTSPQLY*RYSPNS
Trigger: GCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGA...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR CCA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACCACACCTTGGACTGCTaGGGCTCATTCATCTCCGGC +
Preference number: 2 (lower is better)
Translates to: SRLILEKPGCFCEACMIHHTLDC*GSFISG
Trigger: GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTG...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR CCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTTCCCACATCACACCTTaGACTGCTGGGGCTCATTCA +
Preference number: 2 (lower is better)
Translates to: AQLARLMCGELITALLGTSHITP*TAGAHS
Trigger: TGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGA...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR TCA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACCAACCTCGGTGCCTGTaGTTCCTCACAATGCCCATG +
Preference number: 2 (lower is better)
Translates to: SRLILEKPGCFCEACMIHQPRCL*FLTMPM
Trigger: CATGGGCATTGTGAGGAATCACAGGCACCGAGGTTG...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR TCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTACCTGTGAAACAGAAGTaGGGCAGCTGGTTTGTACTC +
Preference number: 2 (lower is better)
Translates to: ELAQLARLMCGELITALLPVKQK*GSWFVL
Trigger: GAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGG...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR GCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTATGTGATTCCTCACAATaGCCATGCCAGGCCTTTCCT +
Preference number: 2 (lower is better)
Translates to: ELAQLARLMCGELITALLCDSSQ*PCQAFP
Trigger: AGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACA...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR CCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGCAAGCTCCGCCTCCCTaGTTCATACCATTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMQAPPP*FIPFSC
Trigger: GCAGGAGAATGGTATGAACCAGGGAGGCGGAGCTTG...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR CCA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCATTTGACAGTCCAAAATaGCACTTATTGAGTGTCCGT +
Preference number: 2 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSFDSPK*HLLSVR
Trigger: ACGGACACTCAATAAGTGCCATTTTGGACTGTCAAA...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR TCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACCTTATTGAGTGTCCGTaGCAATACATGCTGACAAGC +
Preference number: 2 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHLIECP*QYMLTS
Trigger: GCTTGTCAGCATGTATTGTCACGGACACTCAATAAG...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR TCA 90 bp ACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACATTCCCGAGCTGCAAATaGAGGAATCTACTCCCGGCG +
Preference number: 2 (lower is better)
Translates to: TIFRLCEFKFAGLSIYCTFPSCK*RNLLPA
Trigger: CGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAA...TGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
3UTR-3UTR CCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTCACACCTTGGACTGCTaGGGCTCATTCATCTCCGGC +
Preference number: 2 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTHTLDC*GSFISG
Trigger: GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTG...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR CCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACGTTTCTCCCCGTAAATaGTCTCAAGTTTCTCCCGTA +
Preference number: 2 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHVSPRK*SQVSPV
Trigger: TACGGGAGAAACTTGAGACCATTTACGGGGAGAAAC...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR TCA 90 bp TGTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTTCCCGAGCTGCAAATaGAGGAATCTACTCCCGGCG +
Preference number: 2 (lower is better)
Translates to: CTTIFRLCEFKFAGLSIYFPSCK*RNLLPA
Trigger: CGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAA...GTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
3UTR-3UTR GCA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTAAGCTGGTTTGTACTCTaGTATCTTCCCAGAATCAAG +
Preference number: 2 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLSWFVL*YLPRIK
Trigger: CTTGATTCTGGGAAGATAGCAGAGTACAAACCAGCT...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR CCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGTGTGAGCAGGGAGGATaGGTCCAGCTTGCTTCCTTT +
Preference number: 2 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWCEQGG*VQLASF
Trigger: AAAGGAAGCAAGCTGGACCCATCCTCCCTGCTCACA...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR TCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTTCTGTGAAGCATGCATaGTTCACAAAATTTGCCACC +
Preference number: 2 (lower is better)
Translates to: AQLARLMCGELITALLGTSVKHA*FTKFAT
Trigger: GGTGGCAAATTTTGTGAATCATGCATGCTTCACAGA...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR TCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTACCTGGTTGTTTCTGTaGAGCATGCATGATTCACAA +
Preference number: 2 (lower is better)
Translates to: AQLARLMCGELITALLGTTWLFL*SMHDSQ
Trigger: TTGTGAATCATGCATGCTTCACAGAAACAACCAGGT...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR TCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACCCTGTGAAACAGAAGTaGGGCAGCTGGTTTGTACTC +
Preference number: 2 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHPVKQK*GSWFVL
Trigger: GAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGG...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR TCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTCAAAATGGCACTTATTaGGTGTCCGTGACAATACAT +
Preference number: 2 (lower is better)
Translates to: AQLARLMCGELITALLGTQNGTY*VSVTIH
Trigger: ATGTATTGTCACGGACACTCAATAAGTGCCATTTTG...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR GCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTTGTGATTCCTCACAATaGCCATGCCAGGCCTTTCCT +
Preference number: 2 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTCDSSQ*PCQAFP
Trigger: AGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACA...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR CCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTATTTGACAGTCCAAAATaGCACTTATTGAGTGTCCGT +
Preference number: 2 (lower is better)
Translates to: ELAQLARLMCGELITALLFDSPK*HLLSVR
Trigger: ACGGACACTCAATAAGTGCCATTTTGGACTGTCAAA...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR CAA 90 bp GAGTTTTCTGATGTACAACAATTTTTAGGCTTTGTGAATTCAAGTTaGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAA +
Preference number: 2 (lower is better)
Translates to: EFSDVQQFLGFVNSS*LGFPSTAQRLPELQ
Trigger: TTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTACATCAGAAAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
3UTR-3UTR GCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGAGCTGGTTTGTACTCTaGTATCTTCCCAGAATCAAG +
Preference number: 2 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMSWFVL*YLPRIK
Trigger: CTTGATTCTGGGAAGATAGCAGAGTACAAACCAGCT...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR GCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAATGATTCACAAAATTTaGCACCCTCAATACCCCAAA +
Preference number: 2 (lower is better)
Translates to: ELAQLARLMCGELITALLMIHKI*HPQYPK
Trigger: TTTGGGGTATTGAGGGTGGCAAATTTTGTGAATCAT...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR GCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTTGTTTCTGTGAAGCATaGATGATTCACAAAATTTGC +
Preference number: 2 (lower is better)
Translates to: AQLARLMCGELITALLGTCFCEA*MIHKIC
Trigger: GCAAATTTTGTGAATCATGCATGCTTCACAGAAACA...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR CCA 72 bp GAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTaGCACTTGGAGTGGAGTGGGGGTGCCAGCTTGGGA +
Preference number: 3 (lower is better)
Translates to: EPGRTGRDKPTT*HLEWSGGASLG
Trigger: TCCCAAGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
3UTR GCA 72 bp AGAGCACAGGAAGGGCGAGTCCCGGTGAGTGAGCTCTaGGGTGTCTTCCCACATCACACCTTGGACTGCTGG +
Preference number: 3 (lower is better)
Translates to: RAQEGRVPVSEL*GVFPHHTLDCW
Trigger: CCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCAGAGCTCACTCACCGGGACTCGCCCTTCCTGTGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR TCA 72 bp ATCTGTAAGAGCACAGGAAGGGCGAGTCCCGGTGAGTaGGCTCTGCGGTGTCTTCCCACATCACACCTTGGA +
Preference number: 3 (lower is better)
Translates to: ICKSTGRASPGE*ALRCLPTSHLG
Trigger: TCCAAGGTGTGATGTGGGAAGACACCGCAGAGCTCACTCACCGGGACTCGCCCTTCCTGTGCTCTTACAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR TCA 72 bp TTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATaGAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCG +
Preference number: 3 (lower is better)
Translates to: FHLLHKDFPSCK*RNLLPAWGSAA
Trigger: CGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
3UTR GCA 72 bp CCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTaGTCCCCTCAACTGTACTGCCGGTACTCACCAAAC +
Preference number: 3 (lower is better)
Translates to: PSPPSIRGNAVP*SPQLYCRYSPN
Trigger: GTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR CAA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACTTCCCACATCACACCTaGGACTGCTGGGGCTCATTC +
Preference number: 3 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHFPHHT*DCWGSF
Trigger: GAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAA...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR CAA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTGAGGATGGGTCCAGCTaGCTTCCTTTTTCCATCAGC +
Preference number: 3 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTEDGSS*LPFSIS
Trigger: GCTGATGGAAAAAGGAAGCAAGCTGGACCCATCCTC...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR GCA 72 bp CGGGGCAATGCTGTTCCCTGCTCCCCTCAACTGTACTaGCGGTACTCACCAAACAGCACTATGGATATGAAA +
Preference number: 3 (lower is better)
Translates to: RGNAVPCSPQLY*RYSPNSTMDMK
Trigger: TTTCATATCCATAGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATTGCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR TCA 72 bp CAGGAAGTGCTTTCTAAAAGGAGATGCGGGGATTGTTaGGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTC +
Preference number: 3 (lower is better)
Translates to: QEVLSKRRCGDC*EGSVRAQEGRV
Trigger: GACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTTTTAGAAAGCACTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR TCA 72 bp AACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTaGTTCCTCACAATGCCCATGCCAGGCCTTTCCTTT +
Preference number: 3 (lower is better)
Translates to: NLQYSREQPRCL*FLTMPMPGLSF
Trigger: AAAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR GCA 72 bp AAGAATGTAACCATCTCCACCTTCAATACGGGGCAATaGTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTA +
Preference number: 3 (lower is better)
Translates to: KNVTISTFNTGQ*CSLLPSTVLPV
Trigger: TACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR CAA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACAAGGAGATGCGGGGATaGTTGAGAGGGATCTGTAAG +
Preference number: 3 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHKEMRG*LRGICK
Trigger: CTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR CAA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTTTCCCACATCACACCTaGGACTGCTGGGGCTCATTC +
Preference number: 3 (lower is better)
Translates to: AQLARLMCGELITALLGTFPHHT*DCWGSF
Trigger: GAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAA...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR TCA 72 bp CTTCCTTTTTCCATCAGCCTCCCTGTGAAACAGAAGTaGGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGA +
Preference number: 3 (lower is better)
Translates to: LPFSISLPVKQK*GSWFVLCYLPR
Trigger: TCTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGGCTGATGGAAAAAGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR CAA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGTTCCCACATCACACCTaGGACTGCTGGGGCTCATTC +
Preference number: 3 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWFPHHT*DCWGSF
Trigger: GAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAA...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR CAA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACAGTGAGGCAGCTGGTTaGTACTCTGCTATCTTCCCA +
Preference number: 3 (lower is better)
Translates to: SRLILEKPGCFCEACMIHSEAAG*YSAIFP
Trigger: TGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACT...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR CAA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGGAGGATGGGTCCAGCTaGCTTCCTTTTTCCATCAGC +
Preference number: 3 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWEDGSS*LPFSIS
Trigger: GCTGATGGAAAAAGGAAGCAAGCTGGACCCATCCTC...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR GCA 72 bp CTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTaGACAAAGACTTCCCGAGCTGCAAATGAAGGAATC +
Preference number: 3 (lower is better)
Translates to: LCEFKFAGLSIY*TKTSRAANEGI
Trigger: GATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
3UTR CCA 72 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATaGGGAAACAGGGCTACTATGCACAGTGCTATTTGT +
Preference number: 3 (lower is better)
Translates to: VCHNILYHSPTP*GNRATMHSAIC
Trigger: ACAAATAGCACTGTGCATAGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR CAA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTGAGGATGGGTCCAGCTaGCTTCCTTTTTCCATCAGC +
Preference number: 3 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTEDGSS*LPFSIS
Trigger: GCTGATGGAAAAAGGAAGCAAGCTGGACCCATCCTC...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR-3UTR CAA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTCATGATTCACAAAATTaGCCACCCTCAATACCCCAA +
Preference number: 3 (lower is better)
Translates to: AQLARLMCGELITALLGTHDSQN*PPSIPQ
Trigger: TTGGGGTATTGAGGGTGGCAAATTTTGTGAATCATG...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR TCA 72 bp AAGCATCTAAATTTGACAGTCCAAAATGGCACTTATTaGGTGTCCGTGACAATACATGCTGACAAGCAGCAC +
Preference number: 3 (lower is better)
Translates to: KHLNLTVQNGTY*VSVTIHADKQH
Trigger: GTGCTGCTTGTCAGCATGTATTGTCACGGACACTCAATAAGTGCCATTTTGGACTGTCAAATTTAGATGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR GCA 72 bp CTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATaGATGATTCACAAAATTTGCCACCCTCAATACCCC +
Preference number: 3 (lower is better)
Translates to: LILEKPGCFCEA*MIHKICHPQYP
Trigger: GGGGTATTGAGGGTGGCAAATTTTGTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR TCA 72 bp CATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTaGTCCAGACTAATTCTGGAAAAACCTGGTTGTTTC +
Preference number: 3 (lower is better)
Translates to: HVWRINNSFVRH*SRLILEKPGCF
Trigger: GAAACAACCAGGTTTTTCCAGAATTAGTCTGGATCAGTGCCTAACAAAGCTGTTATTAATTCTCCACACATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
3UTR CCA 72 bp CTGCTATCTTCCCAGAATCAAGTTTCTCCCCGTAAATaGTCTCAAGTTTCTCCCGTAAATTCTATATATGAA +
Preference number: 3 (lower is better)
Translates to: LLSSQNQVSPRK*SQVSPVNSIYE
Trigger: TTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATTCTGGGAAGATAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCGGAGCGGAGTGGAGGTaGGTCGCCCGGGTCGCCGTA +
Preference number: 4 (lower is better)
Translates to: EDRAGQANHLALGVEWGCGAEWR*VARVAV
Trigger: TACGGCGACCCGGGCGACTCACCTCCACTCCGCTCC...GCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp AGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGCGTCCGGGCAGAGGCTaGAACCGGACCGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SQGGPGGTSQPLGTWSGVRPGRG*NRTGPG
Trigger: GCCAGGCCCGGTCCGGTTCCAGCCTCTGCCCGGACG...CACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp TGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGACCGAACCATAGGCCGTaGCGGGGCGCCCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: WSQGGPGGTSQPLGTWSGPNHRP*RGAHLQ
Trigger: CTGCAGGTGGGCGCCCCGGCACGGCCTATGGTTCGG...TCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457905.7
3UTR CAA 72 bp GGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTaGGCACTTGGAGTGGAGTGGGGGTGCCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GAREDRAGQANH*ALGVEWGCQLG
Trigger: CCCAAGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp ACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCGGAGCGGAGTGGAGGTaGGTCGCCCGGGTCGCCGTA +
Preference number: 4 (lower is better)
Translates to: TSRAANEGIYSRRGGPQRGAEWR*VARVAV
Trigger: TACGGCGACCCGGGCGACTCACCTCCACTCCGCTCC...GCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp CAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGTGGACGAGCCCTGAATaGCCCGGTCGAGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QGGPGGTSQPLGTWSGVGWTSPE*PGRARA
Trigger: AGCCCTGGCTCGACCGGGTCATTCAGGGCTCGTCCA...CCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp GAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCGAGGTGGACGAGCCCTaGATGACCCGGTCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: EDRAGQANHLALGVEWGCEVDEP*MTRSSQ
Trigger: CTGGCTCGACCGGGTCATTCAGGGCTCGTCCACCTC...GCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp CCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCCAGCTGGGGGACACCTGCAGTaGGAGGCTCCCCTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PGGTSQPLGTWSGVGVPAGGHLQ*EAPLSA
Trigger: TGCTGAGAGGGGAGCCTCTCACTGCAGGTGTCCCCC...AGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCGTGGTGCCGAGGTTCTaGGGGTGCGGGGGCCGCACG +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGVVPRF*GCGGRT
Trigger: CGTGCGGCCCCCGCACCCTCAGAACCTCGGCACCAC...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGGGGCTCCACGGCCAGTaGGGTGGCCACAACGTCATC +
Preference number: 4 (lower is better)
Translates to: GGPGGTSQPLGTWSGVGVGLHGQ*GGHNVI
Trigger: GATGACGTTGTGGCCACCGCACTGGCCGTGGAGCCC...CACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp CCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCCAGCTGCCAGGGCTCGACGCTaGAATGGCTCTGGAGCGGAG +
Preference number: 4 (lower is better)
Translates to: PGGTSQPLGTWSGVGVPAARARR*NGSGAE
Trigger: CTCCGCTCCAGAGCCATTCCAGCGTCGAGCCCTGGC...AGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp CCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCCAGCTGCGTGGCTGCAGCACTaGGAGCAGTGGTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PGGTSQPLGTWSGVGVPAAWLQH*EQWWVS
Trigger: GGAGACCCACCACTGCTCCCAGTGCTGCAGCCACGC...AGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp TGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGACCCAGCGCTGCAAGGTaGCCAACAGCGACGGCGGTC +
Preference number: 4 (lower is better)
Translates to: WSQGGPGGTSQPLGTWSGPSAAR*PTATAV
Trigger: GACCGCCGTCGCTGTTGGCCACCTTGCAGCGCTGGG...TCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp GGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCCAGTCCCTGTGTCCTaGGCCAGAGGGTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GGPGGTSQPLGTWSGVGVPVPVS*ARGCQS
Trigger: GGACTGGCACCCTCTGGCCCAGGACACAGGGACTGG...CACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp CAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGCGGGGGCCAACCTTTaGAAGCTGCCACCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: QGGPGGTSQPLGTWSGVGAGANL*KLPPLL
Trigger: CAGGAGAGGTGGCAGCTTTCAAAGGTTGGCCCCCGC...CCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp TGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGCCGAGACTTCTaGTGCTTGGGTGCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: WSQGGPGGTSQPLGTWSGVGRDF*CLGAAA
Trigger: GGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCCCAC...TCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp AGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGGCCCCCGGCGTGGCTaGAGCACTGGGAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: RLPELQMKESTPGVGVRSGPRRG*STGSSG
Trigger: ACCACTGCTCCCAGTGCTGCAGCCACGCCGGGGGCC...GCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp GAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCCCAGCATGCTCCCGCTaGACCCCCGAGGAACACTTC +
Preference number: 4 (lower is better)
Translates to: EDRAGQANHLALGVEWGCPACSR*TPEEHF
Trigger: GAAGTGTTCCTCGGGGGTGCAGCGGGAGCATGCTGG...GCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp GAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTCAGAGCCCGGCACTGTaGCAGCAGGGATGCGTGGGA +
Preference number: 4 (lower is better)
Translates to: EPGRTGRDKPTTWHLEWSQSPAL*QQGCVG
Trigger: TCCCACGCATCCCTGCTGGCACAGTGCCGGGCTCTG...ACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCGAACCGGACCGGGCCTaGCGGCGGCAGCGCAAACCT +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGEPDRA*RRQRKP
Trigger: AGGTTTGCGCTGCCGCCGCCAGGCCCGGTCCGGTTC...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCTGGGTGCAGCGGCCGTaGTTTGTGAGGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: EDRAGQANHLALGVEWGCWVQRP*FVRAQE
Trigger: TTCCTGGGCCCTCACAAACCACGGCCGCTGCACCCA...GCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp ACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCCCCAGCGCTGCAAGGTaGCCAACAGCGACGGCGGTC +
Preference number: 4 (lower is better)
Translates to: TSRAANEGIYSRRGGPQRPSAAR*PTATAV
Trigger: GACCGCCGTCGCTGTTGGCCACCTTGCAGCGCTGGG...GCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAGGAGCGGAGTGGAGGTaGGTCGCCCGGGTCGCCGTA +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAGAEWR*VARVAV
Trigger: TACGGCGACCCGGGCGACTCACCTCCACTCCGCTCC...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGGTCTCCCTCCCGGGTaGGATGAGGTGGAGGATGCA +
Preference number: 4 (lower is better)
Translates to: WSQGGPGGTSQPLGTWSGGLPPG*DEVEDA
Trigger: TGCATCCTCCACCTCATCTCACCCGGGAGGGAGACC...TCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp CGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCCAGCTTCCACGAGGCCCGTGGTaGCATCAGGAGGGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: RAGQANHLALGVEWGCQLPRGPW*HQEGQN
Trigger: ATTCTGCCCCTCCTGATGTCACCACGGGCCTCGTGG...AAGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp ACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCGTGGGCCGAGACTTCTaGTGCTTGGGTGCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: TSRAANEGIYSRRGGPQRVGRDF*CLGAAA
Trigger: GGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCCCAC...GCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp ATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCAGGCCCCCGGCGTGGCTaGAGCACTGGGAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: INKAGAREDRAGQANHLAGPRRG*STGSSG
Trigger: ACCACTGCTCCCAGTGCTGCAGCCACGCCGGGGGCC...TGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCGTGGGCCTCGAGGCCTaGGAGTGCAGTGGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGVGLEA*ECSGSG
Trigger: GCCGCTACCACTGCACTCGCAGGCCTCGAGGCCCAC...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGATCCTGGGCCAGAGGGTaGCAGTCCTTTGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: WSQGGPGGTSQPLGTWSGSWARG*QSFGGL
Trigger: CAAGCCCCCAAAGGACTGGCACCCTCTGGCCCAGGA...TCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp CGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCCAGCTTGAGGCATCCGGCCGCTaGTCAGCCACCAGGACAATC +
Preference number: 4 (lower is better)
Translates to: RAGQANHLALGVEWGCQLEASGR*SATRTI
Trigger: GATTGTCCTGGTGGCTGAGCAGCGGCCGGATGCCTC...AAGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCGAACCGGACCGGGCCTaGCGGCGGCAGCGCAAACCT +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGEPDRA*RRQRKP
Trigger: AGGTTTGCGCTGCCGCCGCCAGGCCCGGTCCGGTTC...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCCCCAGCGCTGCAAGGTaGCCAACAGCGACGGCGGTC +
Preference number: 4 (lower is better)
Translates to: RLPELQMKESTPGVGVRSPSAAR*PTATAV
Trigger: GACCGCCGTCGCTGTTGGCCACCTTGCAGCGCTGGG...GCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp ACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCCCAGTCCCTGTGTCCTaGGCCAGAGGGTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: TSRAANEGIYSRRGGPQRPVPVS*ARGCQS
Trigger: GGACTGGCACCCTCTGGCCCAGGACACAGGGACTGG...GCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp ACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCGAGTACCCGCACGCCTaGGTCAGAGCCCGGCACTGT +
Preference number: 4 (lower is better)
Translates to: TSRAANEGIYSRRGGPQREYPHA*VRARHC
Trigger: ACAGTGCCGGGCTCTGACCCAGGCGTGCGGGTACTC...GCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp GGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGGGAGGATGCAGAGGATaGGGTGGACGAGCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: GGPGGTSQPLGTWSGVGVGGCRG*GGRALN
Trigger: ATTCAGGGCTCGTCCACCTCATCCTCTGCATCCTCC...CACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp ACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCGGTCTCCCTCCCGGGTaGGATGAGGTGGAGGATGCA +
Preference number: 4 (lower is better)
Translates to: TSRAANEGIYSRRGGPQRGLPPG*DEVEDA
Trigger: TGCATCCTCCACCTCATCTCACCCGGGAGGGAGACC...GCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp ACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCGCGGGGGCCAACCTTTaGAAGCTGCCACCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: TSRAANEGIYSRRGGPQRAGANL*KLPPLL
Trigger: CAGGAGAGGTGGCAGCTTTCAAAGGTTGGCCCCCGC...GCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp GGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGAATCAGCATGCGCAGTaGGCTGAGGCTGACGTCCCT +
Preference number: 4 (lower is better)
Translates to: GGPGGTSQPLGTWSGVGVNQHAQ*AEADVP
Trigger: AGGGACGTCAGCCTCAGCTCACTGCGCATGCTGATT...CACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp GAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCGCAGGCCTGTCCTGGTaGATGGCCTGTCAAAGATGG +
Preference number: 4 (lower is better)
Translates to: EDRAGQANHLALGVEWGCAGLSW*MACQRW
Trigger: CCATCTTTGACAGGCCATTCACCAGGACAGGCCTGC...GCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAGGGCCTTGTACTGGCTaGCGGCCGACAGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAGPCTG*RPTATG
Trigger: CCCTGTGGCTGTCGGCCGTCAGCCAGTACAAGGCCC...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCGCGAGTCCCGGTGAGTaGGCTCTGCGGTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGASPGE*ALRCLP
Trigger: GGGAAGACACCGCAGAGCTCACTCACCGGGACTCGC...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGGCCGAGACTTCTGCTaGTTGGGTGCAGCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: RLPELQMKESTPGVGVRSGRDFC*LGAAAV
Trigger: CACGGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCC...GCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp CAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGCGCTCAAAGTACGAATaGTCCACGAGGCCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: QGGPGGTSQPLGTWSGVGRSKYE*STRPVV
Trigger: CACCACGGGCCTCGTGGAGCATTCGTACTTTGAGCG...CCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp CCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCCAGCTATTTGGGCTGTGTTGTaGCCCAGCGCTGCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: PGGTSQPLGTWSGVGVPAIWAVL*PSAARW
Trigger: CCACCTTGCAGCGCTGGGGCACAACACAGCCCAAAT...AGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp ACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCTCCTGGGCCAGAGGGTaGCAGTCCTTTGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: TSRAANEGIYSRRGGPQRSWARG*QSFGGL
Trigger: CAAGCCCCCAAAGGACTGGCACCCTCTGGCCCAGGA...GCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp CGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCCAGCTTGGAGTGGAGTGGGGGTaGCAGCTTGGGAGATTCACC +
Preference number: 4 (lower is better)
Translates to: RAGQANHLALGVEWGCQLGVEWG*QLGRFT
Trigger: GGTGAATCTCCCAAGCTGGCACCCCCACTCCACTCC...AAGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp GAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCGAGACTTCTGCTGCTTaGGTGCAGCGGCCGTGGTTT +
Preference number: 4 (lower is better)
Translates to: EDRAGQANHLALGVEWGCETSAA*VQRPWF
Trigger: AAACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTC...GCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp ACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCGGCTCGACGCTGGAATaGCTCTGGAGCGGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: TSRAANEGIYSRRGGPQRGSTLE*LWSGVE
Trigger: CTCCACTCCGCTCCAGAGCCATTCCAGCGTCGAGCC...GCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp AGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCCAGGGCTCGACGCTaGAATGGCTCTGGAGCGGAG +
Preference number: 4 (lower is better)
Translates to: RLPELQMKESTPGVGVRSARARR*NGSGAE
Trigger: CTCCGCTCCAGAGCCATTCCAGCGTCGAGCCCTGGC...GCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCCCACGTAGACGGTTGTaGGGTCCGGGCCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGPRRRL*GPGQLC
Trigger: GCACAGCTGGCCCGGACCCCACAACCGTCTACGTGG...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCACTTGGCACTTGGAGTaGAGTGGGGGTGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: EDRAGQANHLALGVEWGCTWHLE*SGGASL
Trigger: CAAGCTGGCACCCCCACTCCACTCCAAGTGCCAAGT...GCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp TGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAAGAGCCCTCATCTTCTaGGGCAGACGACGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: WSQGGPGGTSQPLGTWSGRALIF*GRRRVW
Trigger: CCAGACACGTCGTCTGCCTCAGAAGATGAGGGCTCT...TCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp AAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGGAGGTGGACGAGCCCTaGATGACCCGGTCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: KTSRAANEGIYSRRGGPQEVDEP*MTRSSQ
Trigger: CTGGCTCGACCGGGTCATTCAGGGCTCGTCCACCTC...CTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAGGCCGAGACTTCTGCTaGTTGGGTGCAGCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAGRDFC*LGAAAV
Trigger: CACGGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCC...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACGGTCGGGGGACACCTaGAGTGAGAGGCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: INKAGAREDRAGQANHLARSGDT*SERLPS
Trigger: AGAGGGGAGCCTCTCACTGCAGGTGTCCCCCGACCG...TGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp AAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGGTCGGGGGACACCTaGAGTGAGAGGCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: KTSRAANEGIYSRRGGPQRSGDT*SERLPS
Trigger: AGAGGGGAGCCTCTCACTGCAGGTGTCCCCCGACCG...CTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCCAGAGCCCGGCACTGTaGCAGCAGGGATGCGTGGGA +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGQSPAL*QQGCVG
Trigger: TCCCACGCATCCCTGCTGGCACAGTGCCGGGCTCTG...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCGAGGCATCCGGCCGCTaGTCAGCCACCAGGACAATC +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGEASGR*SATRTI
Trigger: GATTGTCCTGGTGGCTGAGCAGCGGCCGGATGCCTC...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCGTGTGGGCACGCCACTaGAGCACGTCAGCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGVWARH*STSARN
Trigger: GTTCCTGGCTGACGTGCTGCAGTGGCGTGCCCACAC...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTCGTCCGGGCAGAGGCTaGAACCGGACCGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLRPGRG*NRTGPG
Trigger: GCCAGGCCCGGTCCGGTTCCAGCCTCTGCCCGGACG...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGGCAGACGACGTGTCTaGAGGGGTGTAGGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: WSQGGPGGTSQPLGTWSGGRRRV*RGVGFH
Trigger: GTGGAAACCTACACCCCTCCAGACACGTCGTCTGCC...TCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp GAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTACGCTGGAATGGCTCTaGAGCGGAGTGGAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: EPGRTGRDKPTTWHLEWSTLEWL*SGVEVS
Trigger: ACTCACCTCCACTCCGCTCCAGAGCCATTCCAGCGT...ACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp CGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCCAGCTTCAGTGGAGGGCGCTTTaGCCTCTTCAGGGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: RAGQANHLALGVEWGCQLQWRAL*PLQGVQ
Trigger: CTGAACACCCTGAAGAGGCCAAAGCGCCCTCCACTG...AAGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp CAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGAGATCGACCACGGGTTaGCACCATCGGCCACAATCA +
Preference number: 4 (lower is better)
Translates to: QGGPGGTSQPLGTWSGVGRSTTG*HHRPQS
Trigger: TGATTGTGGCCGATGGTGCCAACCCGTGGTCGATCT...CCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACAGGTGGCCTGCGGATaGCGACAGTCAGCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAQVACG*RQSAPQ
Trigger: CTGAGGCGCTGACTGTCGCCATCCGCAGGCCACCTG...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp ACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCTCCTCCCAGATCAGGTaGCCTGCGGATGGCGACAGT +
Preference number: 4 (lower is better)
Translates to: TSRAANEGIYSRRGGPQRSSQIR*PADGDS
Trigger: ACTGTCGCCATCCGCAGGCCACCTGATCTGGGAGGA...GCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCTGGTCAGGAGTGGTGTaGGCACGCCACTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGWSGVV*ARHCST
Trigger: CGTGCTGCAGTGGCGTGCCCACACCACTCCTGACCA...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCGGGCCAGCTGTGCCCTaGAGGCAGATGGCCACGTTG +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGGPAVP*RQMATL
Trigger: CAACGTGGCCATCTGCCTCCAGGGCACAGCTGGCCC...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400274.5
ENST00000417564.3
CDS-3UTR CCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCCCACGTAGACGGTTGTaGGGTCCGGGCCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGPRRRL*GPGQLC
Trigger: GCACAGCTGGCCCGGACCCCACAACCGTCTACGTGG...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTAGCGGCCGTGGTTTGTaGGGGCCCAGGAATTCTATT +
Preference number: 4 (lower is better)
Translates to: EPGRTGRDKPTTWHLEWSSGRGL*GPRNSI
Trigger: AATAGAATTCCTGGGCCCTCACAAACCACGGCCGCT...ACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp GAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTTTCAGTGTGGACATCTaGCCGGAAGCGCTCATCCCT +
Preference number: 4 (lower is better)
Translates to: EPGRTGRDKPTTWHLEWSFSVDI*PEALIP
Trigger: AGGGATGAGCGCTTCCGGTCAGATGTCCACACTGAA...ACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTGGAGCGGAGTGGAGGTaGGTCGCCCGGGTCGCCGTA +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLGAEWR*VARVAV
Trigger: TACGGCGACCCGGGCGACTCACCTCCACTCCGCTCC...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAGGTCTCCCTCCCGGGTaGGATGAGGTGGAGGATGCA +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAGLPPG*DEVEDA
Trigger: TGCATCCTCCACCTCATCTCACCCGGGAGGGAGACC...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCCCACGAGGCCCGTGGTaGCATCAGGAGGGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGPRGPW*HQEGQN
Trigger: ATTCTGCCCCTCCTGATGTCACCACGGGCCTCGTGG...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCATGCGTGGGACACTGTaGCCCCCACCGTACTGCCTT +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGMRGTL*PPPYCL
Trigger: AAGGCAGTACGGTGGGGGTCACAGTGTCCCACGCAT...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACGTGGTGCCGAGGTTCTaGGGGTGCGGGGGCCGCACG +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHVVPRF*GCGGRT
Trigger: CGTGCGGCCCCCGCACCCTCAGAACCTCGGCACCAC...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGCTCGAGGCCTGCGAGTaGAGTGGTAGCGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: YCTKTSRAANEGIYSRRGLEACE*SGSGGP
Trigger: GGGGCCGCCGCTACCACTGCACTCGCAGGCCTCGAG...CCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp CAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGCCAGATCAGGTGGCCTaGGGATGGCGACAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: QINKAGAREDRAGQANHLPDQVA*GWRQSA
Trigger: CGCTGACTGTCGCCATCCGCAGGCCACCTGATCTGG...CAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp ACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGGGGCTCCACGGCCAGTaGGGTGGCCACAACGTCATC +
Preference number: 4 (lower is better)
Translates to: TKTSRAANEGIYSRRGGPGLHGQ*GGHNVI
Trigger: GATGACGTTGTGGCCACCGCACTGGCCGTGGAGCCC...CGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCGTGTGGGCACGCCACTaGAGCACGTCAGCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGVWARH*STSARN
Trigger: GTTCCTGGCTGACGTGCTGCAGTGGCGTGCCCACAC...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCAGCCGTGTGACAGCCTaGGTGGTGAGGACGCATGCA +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGSRVTA*VVRTHA
Trigger: TGCATGCGTCCTCACCACGCAGGCTGTCACACGGCT...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAGCGCTTGTGGCCGCGTaGGACATCTTCACTCCCGCT +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAALVAA*DIFTPA
Trigger: AGCGGGAGTGAAGATGTCGCACGCGGCCACAAGCGC...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACCCGCGGTCAGCCATaGCCAGGCCGGCTAGCGTCC +
Preference number: 4 (lower is better)
Translates to: ASTPLSIKELAEEALCVTTRGQP*PGRLAS
Trigger: GGACGCTAGCCGGCCTGGCCATGGCTGACCGCGGGT...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACACCCGCGGTCAGCCATaGCCAGGCCGGCTAGCGTCC +
Preference number: 4 (lower is better)
Translates to: KIQINKAGAREDRAGQANTRGQP*PGRLAS
Trigger: GGACGCTAGCCGGCCTGGCCATGGCTGACCGCGGGT...GTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCTGGGTGCAGCGGCCGTaGTTTGTGAGGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGWVQRP*FVRAQE
Trigger: TTCCTGGGCCCTCACAAACCACGGCCGCTGCACCCA...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGAATGCAGATCTATGTaGGTGTGGGCCTCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SQGGPGGTSQPLGTWSGVECRSM*VWASRP
Trigger: AGGCCTCGAGGCCCACACCCACATAGATCTGCATTC...CACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp ATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACGAGTACCCGCACGCCTaGGTCAGAGCCCGGCACTGT +
Preference number: 4 (lower is better)
Translates to: IQINKAGAREDRAGQANHEYPHA*VRARHC
Trigger: ACAGTGCCGGGCTCTGACCCAGGCGTGCGGGTACTC...GTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp CCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCCAGCTTGCTTTTCTTGGAGGTaGTCCTCCCAGATCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PGGTSQPLGTWSGVGVPACFSWR*SSQIRW
Trigger: CCACCTGATCTGGGAGGACCACCTCCAAGAAAAGCA...AGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTCCCTGCACCCGAACGTaGTGCTTACGGCGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTPCTRT*CLRRGP
Trigger: CGGCCCGCGCCGTAAGCACCACGTTCGGGTGCAGGG...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTCCAGCACCACGTTaGTCACCAGGGCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAPPAPR*SPGPPG
Trigger: ACCTGGTGGCCCTGGTGACCAACGTGGTGCTGGAGG...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCCAGCTTaGGAGATTCACCGAACCATA +
Preference number: 4 (lower is better)
Translates to: WSQGGPGGTSQPLGTWSGVGVPA*EIHRTI
Trigger: TATGGTTCGGTGAATCTCCCAAGCTGGCACCCCCAC...TCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp CGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCCAGCTTGACAAGCCAACCACTTaGCACTTGGAGTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: RAGQANHLALGVEWGCQLDKPTT*HLEWSG
Trigger: CCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTC...AAGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCCAGCCTGTTGGGCTaGAGGCAGATGGCCACGTTG +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAPSLLG*RQMATL
Trigger: CAACGTGGCCATCTGCCTCCAGCCCAACAGGCTGGG...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651436.1
CDS-3UTR TCA 90 bp ACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCTTCAGTGTGGACATCTaGCCGGAAGCGCTCATCCCT +
Preference number: 4 (lower is better)
Translates to: TSRAANEGIYSRRGGPQRFSVDI*PEALIP
Trigger: AGGGATGAGCGCTTCCGGTCAGATGTCCACACTGAA...GCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp AGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCAGAGCCCTCATCTTCTaGGGCAGACGACGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: RLPELQMKESTPGVGVRSRALIF*GRRRVW
Trigger: CCAGACACGTCGTCTGCCTCAGAAGATGAGGGCTCT...GCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCAGAGCCCTCATCTTCTaGGGCAGACGACGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGRALIF*GRRRVW
Trigger: CCAGACACGTCGTCTGCCTCAGAAGATGAGGGCTCT...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCATGCGTGGGACACTGTaGCCCCCACCGTACTGCCTT +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGMRGTL*PPPYCL
Trigger: AAGGCAGTACGGTGGGGGTCACAGTGTCCCACGCAT...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp ACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGGCGCGTAGGGGACGCTaGCCACGTGCATCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: TKTSRAANEGIYSRRGGPARRGR*PRASCS
Trigger: TGAACAGGATGCACGTGGTCAGCGTCCCCTACGCGC...CGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCAATCAGCATGCGCAGTaGGCTGAGGCTGACGTCCCT +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGNQHAQ*AEADVP
Trigger: AGGGACGTCAGCCTCAGCTCACTGCGCATGCTGATT...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCGCAGGCCTGTCCTGGTaGATGGCCTGTCAAAGATGG +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGAGLSW*MACQRW
Trigger: CCATCTTTGACAGGCCATTCACCAGGACAGGCCTGC...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCTCTCTCCCGGAAGCCTaGGCGATTCTCTTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGSLPEA*AILFPA
Trigger: TGCTGGGAAGAGAATCGCTCAGGCTTCCGGGAGAGA...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTGGGCCTTGTACTGGCTaGCGGCCGACAGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASGPCTG*RPTATG
Trigger: CCCTGTGGCTGTCGGCCGTCAGCCAGTACAAGGCCC...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTATTTGGCCAAAGCTaGTTGCACGGCTTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: QGGPGGTSQPLGTWSGVGVFGQS*LHGFSV
Trigger: CACACTGAAGCCGTGCAAGCAGCTTTGGCCAAATAC...CCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGGGCCCCCGGCGTGGCTaGAGCACTGGGAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQGPRRG*STGSSG
Trigger: ACCACTGCTCCCAGTGCTGCAGCCACGCCGGGGGCC...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACCTCGAGGCCTGCGAGTaGAGTGGTAGCGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHLEACE*SGSGGP
Trigger: GGGGCCGCCGCTACCACTGCACTCGCAGGCCTCGAG...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCTCGAGGCCTGCGAGTaGAGTGGTAGCGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: MKNTDKQSWSQGGPGGTSLEACE*SGSGGP
Trigger: GGGGCCGCCGCTACCACTGCACTCGCAGGCCTCGAG...GCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp TGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGATCAGGAGGGGCAGAATaGAGATCTATGTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: WSQGGPGGTSQPLGTWSGSGGAE*RSMWVW
Trigger: CCACACCCACATAGATCTGCATTCTGCCCCTCCTGA...TCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp ATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACGTTGTGCCCCAGCGCTaGAAGGTGGCCAACAGCGAC +
Preference number: 4 (lower is better)
Translates to: IQINKAGAREDRAGQANHVVPQR*KVANSD
Trigger: GTCGCTGTTGGCCACCTTGCAGCGCTGGGGCACAAC...GTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp TGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGACCAACCTTTGAAAGCTaGCACCTCTCCTGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: WSQGGPGGTSQPLGTWSGPTFES*HLSCLC
Trigger: GCACAGACAGGAGAGGTGGCAGCTTTCAAAGGTTGG...TCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp ACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCTGTGCCAGCAGGGATaGGTGGGACACTGTGACCCC +
Preference number: 4 (lower is better)
Translates to: TKTSRAANEGIYSRRGGPLCQQG*VGHCDP
Trigger: GGGGTCACAGTGTCCCACGCATCCCTGCTGGCACAG...CGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp CAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTACGCTGTGCCAGTTaGACTGGAACTGACGCATAT +
Preference number: 4 (lower is better)
Translates to: QGGPGGTSQPLGTWSGVGVRCAS*TGTDAY
Trigger: ATATGCGTCAGTTCCAGTGCAACTGGCACAGCGTAC...CCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCTGCACCCGAACGTGGTaGTTACGGCGCGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: ASTPLSIKELAEEALCVTCTRTW*LRRGPA
Trigger: TGCCGGCCCGCGCCGTAAGCACCACGTTCGGGTGCA...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCGCCGGGGCGCCCACCTaGAGCACACGGCTCATCCAC +
Preference number: 4 (lower is better)
Translates to: MKNTDKQSWSQGGPGGTSAGAPT*STRLIH
Trigger: GTGGATGAGCCGTGTGCTGCAGGTGGGCGCCCCGGC...GCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp GCAATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAGAACCGGACCGGGCCTaGCGGCGGCAGCGCAAACCT +
Preference number: 4 (lower is better)
Translates to: AMKNTDKQSWSQGGPGGTEPDRA*RRQRKP
Trigger: AGGTTTGCGCTGCCGCCGCCAGGCCCGGTCCGGTTC...TGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACACCCGCGGTCAGCCATaGCCAGGCCGGCTAGCGTCC +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHTRGQP*PGRLAS
Trigger: GGACGCTAGCCGGCCTGGCCATGGCTGACCGCGGGT...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGACCCGCGGTCAGCCATaGCCAGGCCGGCTAGCGTCC +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQTRGQP*PGRLAS
Trigger: GGACGCTAGCCGGCCTGGCCATGGCTGACCGCGGGT...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGAGACTTCTGCTGCTTaGGTGCAGCGGCCGTGGTTT +
Preference number: 4 (lower is better)
Translates to: RLPELQMKESTPGVGVRSETSAA*VQRPWF
Trigger: AAACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTC...GCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCGGCAGACGACGTGTCTaGAGGGGTGTAGGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGGRRRV*RGVGFH
Trigger: GTGGAAACCTACACCCCTCCAGACACGTCGTCTGCC...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCACGCTGGAATGGCTCTaGAGCGGAGTGGAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: RLPELQMKESTPGVGVRSTLEWL*SGVEVS
Trigger: ACTCACCTCCACTCCGCTCCAGAGCCATTCCAGCGT...GCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCCCCAGCGCTGCAAGGTaGCCAACAGCGACGGCGGTC +
Preference number: 4 (lower is better)
Translates to: ASTPLSIKELAEEALCVTPSAAR*PTATAV
Trigger: GACCGCCGTCGCTGTTGGCCACCTTGCAGCGCTGGG...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGTCTGACAAGCGTCTGTaGTCAGGGCCAAGAAGACTC +
Preference number: 4 (lower is better)
Translates to: SQGGPGGTSQPLGTWSGVSDKRL*SGPRRL
Trigger: GAGTCTTCTTGGCCCTGACCACAGACGCTTGTCAGA...CACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp ACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCAGGACAGATGACCTCTaGCCTCAGACCTCTGGACTG +
Preference number: 4 (lower is better)
Translates to: TSRAANEGIYSRRGGPQRRTDDL*PQTSGL
Trigger: CAGTCCAGAGGTCTGAGGCCAGAGGTCATCTGTCCT...GCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCACGGCCAGTGCGGTaGCCACAACGTCATCTGCAT +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAPRPVR*PQRHLH
Trigger: ATGCAGATGACGTTGTGGCCACCGCACTGGCCGTGG...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAGGAACTTCCGTGCCTaGTCGCTGTCCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGRNFRA*SLSSRW
Trigger: CCACCTGGAGGACAGCGACCAGGCACGGAAGTTCCT...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCGAGGTCCACCCCTGGTaGGTAGACCAGAGCCACATG +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGEVHPW*VDQSHM
Trigger: CATGTGGCTCTGGTCTACCCACCAGGGGTGGACCTC...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCAATGAGGTCCACCCCTaGTGGGTAGACCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGNEVHP*WVDQSH
Trigger: GTGGCTCTGGTCTACCCACCAGGGGTGGACCTCATT...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCGGCATAAGGCGCTTGTaGCCGCGTGCGACATCTTCA +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGGIRRL*PRATSS
Trigger: TGAAGATGTCGCACGCGGCCACAAGCGCCTTATGCC...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGGCTTCCCTCAGGCTTTaGCTGATTTGGATCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GGPGGTSQPLGTWSGVGVASLRL*LIWIWL
Trigger: CAACCAGATCCAAATCAGCCAAAGCCTGAGGGAAGC...CACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
3UTR CAA 72 bp GTGAGTGAGCTCTGCGGTGTCTTCCCACATCACACCTaGGACTGCTGGGGCTCATTCATCTCCGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: VSELCGVFPHHT*DCWGSFISGTW
Trigger: CCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCAGAGCTCACTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTTGGACGAGCCCTGAATaGCCCGGTCGAGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLWTSPE*PGRARA
Trigger: AGCCCTGGCTCGACCGGGTCATTCAGGGCTCGTCCA...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCTCCCTCTGGCCCCGCTaGGCTAGGAGAGACCAGTGC +
Preference number: 4 (lower is better)
Translates to: ASTPLSIKELAEEALCVTSLWPR*ARRDQC
Trigger: GCACTGGTCTCTCCTAGCTCAGCGGGGCCAGAGGGA...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACTCCCTCTGGCCCCGCTaGGCTAGGAGAGACCAGTGC +
Preference number: 4 (lower is better)
Translates to: KIQINKAGAREDRAGQANSLWPR*ARRDQC
Trigger: GCACTGGTCTCTCCTAGCTCAGCGGGGCCAGAGGGA...GTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp AAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGGTGCTCCTCCTGTGGTaGCCGGAACTGCCTCAAACA +
Preference number: 4 (lower is better)
Translates to: KTSRAANEGIYSRRGGPQVLLLW*PELPQT
Trigger: TGTTTGAGGCAGTTCCGGTCACCACAGGAGGAGCAC...CTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp AAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGGCAGGCCTGTCCTGGTaGATGGCCTGTCAAAGATGG +
Preference number: 4 (lower is better)
Translates to: KTSRAANEGIYSRRGGPQAGLSW*MACQRW
Trigger: CCATCTTTGACAGGCCATTCACCAGGACAGGCCTGC...CTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTGGTTGTCAGGCCCGATaGAGCCCAGCAGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASGCQAR*SPAGLS
Trigger: GGACAGGCCTGCTGGGCTTCATCGGGCCTGACAACC...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAGTCTGCGAACTCCAGTaGCCATCAGCCCGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAVCELQ*PSARPV
Trigger: AACTGGACGGGCTGATGGTCACTGGAGTTCGCAGAC...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAAGGTTGCAGTGCTTGTaGCGGTGCCCTTGGCGTTCA +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPARLQCL*RCPWRS
Trigger: TGAACGCCAAGGGCACCGTCACAAGCACTGCAACCT...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGGGGCCTTGTACTGGCTaGCGGCCGACAGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQGPCTG*RPTATG
Trigger: CCCTGTGGCTGTCGGCCGTCAGCCAGTACAAGGCCC...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTCCCCTGGGTCCACGATaGCCACCACTCCCACGACCA +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASPLGPR*PPLPRP
Trigger: TGGTCGTGGGAGTGGTGGTCATCGTGGACCCAGGGG...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTGCGAGTCCCGGTGAGTaGGCTCTGCGGTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASASPGE*ALRCLP
Trigger: GGGAAGACACCGCAGAGCTCACTCACCGGGACTCGC...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCTGGAGTGCAGTAGCGTaGTCTCGGCTCACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGWSAVA*SRLTAS
Trigger: GCTTGCAGTGAGCCGAGATCACGCTACTGCACTCCA...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTGGCCGAGACTTCTGCTaGTTGGGTGCAGCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASGRDFC*LGAAAV
Trigger: CACGGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCC...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACGGCCGAGACTTCTGCTaGTTGGGTGCAGCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: KIQINKAGAREDRAGQANGRDFC*LGAAAV
Trigger: CACGGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCC...GTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCGTGGGCCGAGACTTCTaGTGCTTGGGTGCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: ASTPLSIKELAEEALCVTVGRDF*CLGAAA
Trigger: GGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCCCAC...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACGGCCCCCGGCGTGGCTaGAGCACTGGGAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHGPRRG*STGSSG
Trigger: ACCACTGCTCCCAGTGCTGCAGCCACGCCGGGGGCC...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCGGGGGCTTGGCTAGATaGTTCCCATCAATCACTAGC +
Preference number: 4 (lower is better)
Translates to: TSRAANEGIYSRRGGPQRGGLAR*FPSITS
Trigger: GCTAGTGATTGATGGGAAGCATCTAGCCAAGCCCCC...GCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGTGCACCCGAACGTGGTaGTTACGGCGCGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQCTRTW*LRRGPA
Trigger: TGCCGGCCCGCGCCGTAAGCACCACGTTCGGGTGCA...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCGGCAATGCTGTTCCCTaGTCCCCTCAACTGTACTGC +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGGNAVP*SPQLYC
Trigger: GCAGTACAGTTGAGGGGAGCAGGGAACAGCATTGCC...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTGGGCCAGCTGTGCCCTaGTCAGCCAGCTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLGPAVP*SASFPS
Trigger: GCTGGGAAAGCTGGCTGAGCAGGGCACAGCTGGCCC...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651436.1
CDS-3UTR CCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAGAGACTTCTGCTGCTTaGGTGCAGCGGCCGTGGTTT +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAETSAA*VQRPWF
Trigger: AAACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTC...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTGCCAGGGCTCGACGCTaGAATGGCTCTGGAGCGGAG +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASARARR*NGSGAE
Trigger: CTCCGCTCCAGAGCCATTCCAGCGTCGAGCCCTGGC...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCCAGTGGAGGGCGCTTTaGCCTCTTCAGGGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGQWRAL*PLQGVQ
Trigger: CTGAACACCCTGAAGAGGCCAAAGCGCCCTCCACTG...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGCCAGTCCCTGTGTCCTaGGCCAGAGGGTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: YCTKTSRAANEGIYSRRGPVPVS*ARGCQS
Trigger: GGACTGGCACCCTCTGGCCCAGGACACAGGGACTGG...CCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTCAGGTGGCCTGCGGATaGCGACAGTCAGCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTQVACG*RQSAPQ
Trigger: CTGAGGCGCTGACTGTCGCCATCCGCAGGCCACCTG...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCAGGTGGCCTGCGGATaGCGACAGTCAGCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KIQINKAGAREDRAGQANQVACG*RQSAPQ
Trigger: CTGAGGCGCTGACTGTCGCCATCCGCAGGCCACCTG...GTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp ACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCCAGGACTGCTTTTCTTaGAGGTGGTCCTCCCAGATC +
Preference number: 4 (lower is better)
Translates to: TSRAANEGIYSRRGGPQRQDCFS*RWSSQI
Trigger: GATCTGGGAGGACCACCTCCAAGAAAAGCAGTCCTG...GCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTACGCGGGCCTTGTACTaGCTGACGGCCGACAGCCAC +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLTRALY*LTADSH
Trigger: GTGGCTGTCGGCCGTCAGCCAGTACAAGGCCCGCGT...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCAGGGTCAGCGCAATCCTaGGCCGCTCCTCGGCGACCA +
Preference number: 4 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSGSAQS*AAPRRP
Trigger: TGGTCGCCGAGGAGCGGCCCAGGATTGCGCTGACCC...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAAGCTTGGAGAAGGACTaGGTCAGCGCAATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPASLEKD*VSAILG
Trigger: GCCCAGGATTGCGCTGACCCAGTCCTTCTCCAAGCT...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACCCCTGCACCCGAACGTaGTGCTTACGGCGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHPCTRT*CLRRGP
Trigger: CGGCCCGCGCCGTAAGCACCACGTTCGGGTGCAGGG...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCTACCCGGTGGCATTGTaGGGGCTGCTTACCCAGATC +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGYPVAL*GLLTQI
Trigger: GATCTGGGTAAGCAGCCCCCACAATGCCACCGGGTA...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACGGTGTAGTACCCGGTaGCATTGTGGGGGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPARCSTR*HCGGCL
Trigger: TAAGCAGCCCCCACAATGCCACCGGGTACTACACCG...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCTGTAGGCGACATAGATaGGGTCCAGCTGGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGCRRHR*GPAGQP
Trigger: TGGCTGACCAGCTGGACCCCATCTATGTCGCCTACA...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCATTCAGTGTGGACATCTaGCCGGAAGCGCTCATCCCT +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAFSVDI*PEALIP
Trigger: AGGGATGAGCGCTTCCGGTCAGATGTCCACACTGAA...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGGAGGTGGACGAGCCCTaGATGACCCGGTCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQEVDEP*MTRSSQ
Trigger: CTGGCTCGACCGGGTCATTCAGGGCTCGTCCACCTC...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTCCACGAGGCCCGTGGTaGCATCAGGAGGGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASPRGPW*HQEGQN
Trigger: ATTCTGCCCCTCCTGATGTCACCACGGGCCTCGTGG...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCAAAGTTTACCATAGGTaGGAGTGTAGACGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: EDRAGQANHLALGVEWGCKVYHR*ECRRLS
Trigger: GGAAAGCCGTCTACACTCTCACCTATGGTAAACTTT...GCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp GGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGGACCAGCATCCCTTTTaGAATCCAGCACGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: GGPGGTSQPLGTWSGVGVDQHPF*NPARLL
Trigger: TAACAAACGTGCTGGATTTCAAAAGGGATGCTGGTC...CACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCGCGCGTAGGGGACGCTaGCCACGTGCATCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: ASTPLSIKELAEEALCVTARRGR*PRASCS
Trigger: TGAACAGGATGCACGTGGTCAGCGTCCCCTACGCGC...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGTCCCTCTGGCCCCGCTaGGCTAGGAGAGACCAGTGC +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQSLWPR*ARRDQC
Trigger: GCACTGGTCTCTCCTAGCTCAGCGGGGCCAGAGGGA...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp ACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGAATCAGCATGCGCAGTaGGCTGAGGCTGACGTCCCT +
Preference number: 4 (lower is better)
Translates to: TKTSRAANEGIYSRRGGPNQHAQ*AEADVP
Trigger: AGGGACGTCAGCCTCAGCTCACTGCGCATGCTGATT...CGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp ATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACCCAGTTTGCCCACGATaGAGACCAGGTTGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: IQINKAGAREDRAGQANHPVCPR*RPGCQA
Trigger: GGCCTGACAACCTGGTCTTCATCGTGGGCAAACTGG...GTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTTCACCCCCTTCATCCTaGGGACACCCGTCTGTGCGC +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASSPPSS*GHPSVR
Trigger: GCGCACAGACGGGTGTCCTCAGGATGAAGGGGGTGA...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCAGGCAGATGGCCACGTTaGCCCTGCACCCGAACGTGG +
Preference number: 4 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSGRWPR*PCTRTW
Trigger: CCACGTTCGGGTGCAGGGTCAACGTGGCCATCTGCC...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCGATCTCTCCCAGGTGTaGGTCTCCCAAGGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGDLSQV*VSQGSF
Trigger: AAAGGACCCTTGGGAGACTCACACCTGGGAGAGATC...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACCCCCTGGGTCCACGATaGCCACCACTCCCACGACCA +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHPLGPR*PPLPRP
Trigger: TGGTCGTGGGAGTGGTGGTCATCGTGGACCCAGGGG...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTAAGGGCGAGTCCCGGTaGGTGAGCTCTGCGGTGTCT +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLKGESR*VSSAVS
Trigger: AGACACCGCAGAGCTCACTCACCGGGACTCGCCCTT...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TTTGCAATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGGTGGGCCTCGAGGCCTaGGAGTGCAGTGGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: FAMKNTDKQSWSQGGPGGVGLEA*ECSGSG
Trigger: GCCGCTACCACTGCACTCGCAGGCCTCGAGGCCCAC...CCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCATTGCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTCCAGCATGCTCCCGCTaGACCCCCGAGGAACACTTC +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASPACSR*TPEEHF
Trigger: GAAGTGTTCCTCGGGGGTGCAGCGGGAGCATGCTGG...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTCTGCTGTTTCCAGCATaGTCCCGCTGCACCCCCGAG +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTLLFPA*SRCTPE
Trigger: CTCGGGGGTGCAGCGGGAGCATGCTGGAAACAGCAG...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCTGCTGTTTCCAGCATaGTCCCGCTGCACCCCCGAG +
Preference number: 4 (lower is better)
Translates to: KIQINKAGAREDRAGQANLLFPA*SRCTPE
Trigger: CTCGGGGGTGCAGCGGGAGCATGCTGGAAACAGCAG...GTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp ATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACACAGGGACACCATCTaGTGTTTCCAGCATGCTCCC +
Preference number: 4 (lower is better)
Translates to: INKAGAREDRAGQANHLAHRDTI*CFQHAP
Trigger: GGGAGCATGCTGGAAACAGCAGATGGTGTCCCTGTG...TGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp ACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCGACAGGAACCAGCTCTaGCAGGAGACACCCATAAAA +
Preference number: 4 (lower is better)
Translates to: TSRAANEGIYSRRGGPQRDRNQL*QETPIK
Trigger: TTTTATGGGTGTCTCCTGGCAGAGCTGGTTCCTGTC...GCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTTCCTGGGCCAGAGGGTaGCAGTCCTTTGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASSWARG*QSFGGL
Trigger: CAAGCCCCCAAAGGACTGGCACCCTCTGGCCCAGGA...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCCTGTGCCAGCAGGGATaGGTGGGACACTGTGACCCC +
Preference number: 4 (lower is better)
Translates to: ASTPLSIKELAEEALCVTLCQQG*VGHCDP
Trigger: GGGGTCACAGTGTCCCACGCATCCCTGCTGGCACAG...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTCTGTGCCAGCAGGGATaGGTGGGACACTGTGACCCC +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLLCQQG*VGHCDP
Trigger: GGGGTCACAGTGTCCCACGCATCCCTGCTGGCACAG...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCGTACGCTGTGCCAGTTaGACTGGAACTGACGCATAT +
Preference number: 4 (lower is better)
Translates to: TSRAANEGIYSRRGGPQRVRCAS*TGTDAY
Trigger: ATATGCGTCAGTTCCAGTGCAACTGGCACAGCGTAC...GCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACGGGCTCCACGGCCAGTaGGGTGGCCACAACGTCATC +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHGLHGQ*GGHNVI
Trigger: GATGACGTTGTGGCCACCGCACTGGCCGTGGAGCCC...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAAAGGTAGCCGGTCCTTaGCCAGATGGTCTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAKVAGP*PDGLCV
Trigger: GACACACAGACCATCTGGGCAAGGACCGGCTACCTT...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAGCGATGCTCCTGTGTaGTCGGATGACAGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGSDAPV*SDDRGL
Trigger: GAGACCTCTGTCATCCGAGCACACAGGAGCATCGCT...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCCCGCAGCGCATCACCTaGCTCTGTAGACAAACTTCA +
Preference number: 4 (lower is better)
Translates to: RLPELQMKESTPGVGVRSPQRIT*LCRQTS
Trigger: TGAAGTTTGTCTACAGAGGCAGGTGATGCGCTGCGG...GCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp AAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAACGTCCGGGCAGAGGCTaGAACCGGACCGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: KFAGLSIYCTKTSRAANERPGRG*NRTGPG
Trigger: GCCAGGCCCGGTCCGGTTCCAGCCTCTGCCCGGACG...TTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCCATCCCTCGAGGCGGTaGGCCGAGACTTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ASTPLSIKELAEEALCVTHPSRR*AETSAA
Trigger: AGCAGCAGAAGTCTCGGCCCACCGCCTCGAGGGATG...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp ATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTGCACGGCTTCAGTGTaGACATCTGACCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: IQINKAGAREDRAGQANHCTASV*TSDRKR
Trigger: GCGCTTCCGGTCAGATGTCCACACTGAAGCCGTGCA...GTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGGCCAGGGCTCGACGCTaGAATGGCTCTGGAGCGGAG +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQARARR*NGSGAE
Trigger: CTCCGCTCCAGAGCCATTCCAGCGTCGAGCCCTGGC...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAGAATGCAGATCTATGTaGGTGTGGGCCTCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAECRSM*VWASRP
Trigger: AGGCCTCGAGGCCCACACCCACATAGATCTGCATTC...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp ATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTCAGACAGGGGGATTTaGGCTGTGTTGTGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: IQINKAGAREDRAGQANHSDRGI*AVLCPS
Trigger: GCTGGGGCACAACACAGCCCAAATCCCCCTGTCTGA...GTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGCCAGTCCCTGTGTCCTaGGCCAGAGGGTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQPVPVS*ARGCQS
Trigger: GGACTGGCACCCTCTGGCCCAGGACACAGGGACTGG...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACCCAGTCCCTGTGTCCTaGGCCAGAGGGTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHPVPVS*ARGCQS
Trigger: GGACTGGCACCCTCTGGCCCAGGACACAGGGACTGG...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAAGATCGACCACGGGTTaGCACCATCGGCCACAATCA +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPARSTTG*HHRPQS
Trigger: TGATTGTGGCCGATGGTGCCAACCCGTGGTCGATCT...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCCTCAGACCTCTGGACTaGAAGACGTTGAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGLRPLD*KTLRKA
Trigger: CGCCTTCCTCAACGTCTTCCAGTCCAGAGGTCTGAG...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACTCAGACCTCTGGACTaGAAGACGTTGAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPALRPLD*KTLRKA
Trigger: CGCCTTCCTCAACGTCTTCCAGTCCAGAGGTCTGAG...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGAGGACAGATGACCTCTaGCCTCAGACCTCTGGACTG +
Preference number: 4 (lower is better)
Translates to: QINKAGAREDRAGQANHLRTDDL*PQTSGL
Trigger: CAGTCCAGAGGTCTGAGGCCAGAGGTCATCTGTCCT...CAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCTACACGCCCACCTGGTaGATGCTATCAATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGYTPTW*MLSMAC
Trigger: GCAGGCCATTGATAGCATCCACCAGGTGGGCGTGTA...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTTCGCTGTCCTCCAGGTaGGCGAGCTCTCTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTSLSSR*ASSLPE
Trigger: TTCCGGGAGAGAGCTCGCCCACCTGGAGGACAGCGA...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACCCACGTAGACGGTTGTaGGGTCCGGGCCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHPRRRL*GPGQLC
Trigger: GCACAGCTGGCCCGGACCCCACAACCGTCTACGTGG...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCTGTGAGCAGGGAGGATaGGTCCAGCTTGCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGCEQGG*VQLASF
Trigger: AAAGGAAGCAAGCTGGACCCATCCTCCCTGCTCACA...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACGCGGGGGCCAACCTTTaGAAGCTGCCACCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHAGANL*KLPPLL
Trigger: CAGGAGAGGTGGCAGCTTTCAAAGGTTGGCCCCCGC...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAAGCGCGTAGGGGACGCTaGCCACGTGCATCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: KNTDKQSWSQGGPGGTSQARRGR*PRASCS
Trigger: TGAACAGGATGCACGTGGTCAGCGTCCCCTACGCGC...TTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACATCCCTCTGGCCCCGCTaGGCTAGGAGAGACCAGTGC +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTSLWPR*ARRDQC
Trigger: GCACTGGTCTCTCCTAGCTCAGCGGGGCCAGAGGGA...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TTTGCAATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGGGTTGTCAGGCCCGATaGAGCCCAGCAGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: FAMKNTDKQSWSQGGPGGGCQAR*SPAGLS
Trigger: GGACAGGCCTGCTGGGCTTCATCGGGCCTGACAACC...CCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCATTGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACAGTGGTTGACACGCTaGAGTCCAAGTATGCGAGGA +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAQWLTR*SPSMRG
Trigger: TCCTCGCATACTTGGACTTCAGCGTGTCAACCACTG...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGCGGGGGCACCAGCACTaGTTGGTGTCCCGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQRGHQH*LVSRVD
Trigger: GTCTACTCGGGACACCAATCAGTGCTGGTGCCCCCG...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTAGTAGGAGCAGAAGGTaGCGCGGGCCTTGTACTGGC +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLSRSRR*RGPCTG
Trigger: GCCAGTACAAGGCCCGCGTCACCTTCTGCTCCTACT...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTAGTAGGAGCAGAAGGTaGCGCGGGCCTTGTACTGGC +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTSRSRR*RGPCTG
Trigger: GCCAGTACAAGGCCCGCGTCACCTTCTGCTCCTACT...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACGGCAGATGGCCACGTTaGCCCTGCACCCGAACGTGG +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHGRWPR*PCTRTW
Trigger: CCACGTTCGGGTGCAGGGTCAACGTGGCCATCTGCC...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCTCCTGTGTGCTCGGATaGCAGAGGTCTCAATGTCGA +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGSCVLG*QRSQCR
Trigger: TCGACATTGAGACCTCTGTCATCCGAGCACACAGGA...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGAAGCGGTATATAACGTaGAAGCAGCTTTGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: QGGPGGTSQPLGTWSGVGKRYIT*KQLCPF
Trigger: AAAAGGGCAAAGCTGCTTGCACGTTATATACCGCTT...CCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp AAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGTTGGCCAAAGCTGCTTaGACGGCTTCAGTGTGGACA +
Preference number: 4 (lower is better)
Translates to: KTSRAANEGIYSRRGGPQLAKAA*TASVWT
Trigger: TGTCCACACTGAAGCCGTGCAAGCAGCTTTGGCCAA...CTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp TGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGGCCCCCGGCGTGGCTaGAGCACTGGGAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: CEFKFAGLSIYCTKTSRAGPRRG*STGSSG
Trigger: ACCACTGCTCCCAGTGCTGCAGCCACGCCGGGGGCC...AGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTCGAGGCCTGCGAGTaGAGTGGTAGCGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLLEACE*SGSGGP
Trigger: GGGGCCGCCGCTACCACTGCACTCGCAGGCCTCGAG...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCATCAGGAGGGGCAGAATaGAGATCTATGTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPASGGAE*RSMWVW
Trigger: CCACACCCACATAGATCTGCATTCTGCCCCTCCTGA...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACCCAGCATGCTCCCGCTaGACCCCCGAGGAACACTTC +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHPACSR*TPEEHF
Trigger: GAAGTGTTCCTCGGGGGTGCAGCGGGAGCATGCTGG...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCACTGCTGTTTCCAGCATaGTCCCGCTGCACCCCCGAG +
Preference number: 4 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSLLFPA*SRCTPE
Trigger: CTCGGGGGTGCAGCGGGAGCATGCTGGAAACAGCAG...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACCGGTCGGGGGACACCTaGAGTGAGAGGCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHRSGDT*SERLPS
Trigger: AGAGGGGAGCCTCTCACTGCAGGTGTCCCCCGACCG...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCAAGAAGACTCCACAGCTaGCCAGCAGAAACCCAACCT +
Preference number: 4 (lower is better)
Translates to: INKAGAREDRAGQANHLARRLHS*PAETQP
Trigger: AGGTTGGGTTTCTGCTGGGCAGCTGTGGAGTCTTCT...TGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp GCAATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACACTGTGCCAGCAGGGATaGGTGGGACACTGTGACCCC +
Preference number: 4 (lower is better)
Translates to: AMKNTDKQSWSQGGPGGTLCQQG*VGHCDP
Trigger: GGGGTCACAGTGTCCCACGCATCCCTGCTGGCACAG...TGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCCTTGTTAACACGCCATaGCACAGACCAGCATCCCTT +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGLVNTP*HRPASL
Trigger: AAGGGATGCTGGTCTGTGGCATGGCGTGTTAACAAG...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGGCTAGGAGAGACCAGTaGATGTCTCGCGACTTCACC +
Preference number: 4 (lower is better)
Translates to: TKTSRAANEGIYSRRGGPARRDQ*MSRDFT
Trigger: GGTGAAGTCGCGAGACATGCACTGGTCTCTCCTAGC...CGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACCCAGATCAGGTGGCCTaGGGATGGCGACAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHPDQVA*GWRQSA
Trigger: CGCTGACTGTCGCCATCCGCAGGCCACCTGATCTGG...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGGGCCACAACGTCATCTaGATTGTGTCTGCGAACTCC +
Preference number: 4 (lower is better)
Translates to: KTSRAANEGIYSRRGGPQGHNVI*IVSANS
Trigger: GGAGTTCGCAGACACAATGCAGATGACGTTGTGGCC...CTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACTCTCAGCCCTTTTGTaGAGCTGGACACAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPALSALL*SWTQVA
Trigger: TGCAACCTGTGTCCAGCTGCACAAAAGGGCTGAGAG...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTAGCCGTGTGACAGCCTaGGTGGTGAGGACGCATGCA +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLSRVTA*VVRTHA
Trigger: TGCATGCGTCCTCACCACGCAGGCTGTCACACGGCT...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGGCGCTTGTGGCCGCGTaGGACATCTTCACTCCCGCT +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQALVAA*DIFTPA
Trigger: AGCGGGAGTGAAGATGTCGCACGCGGCCACAAGCGC...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAGCCACAGGGACACGTTaGTCTCCAGCTCCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTATGTR*SPAPAG
Trigger: CCCCGCTGGAGCTGGAGAGCAACGTGTCCCTGTGGC...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTCCTCGGCGACCACCATaGACGTGCGCACACATGACA +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTPRRPP*TCAHMT
Trigger: TGTCATGTGTGCGCACGTGCATGGTGGTCGCCGAGG...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTAGGTCCAGGGCATCCTaGTCTAGCCCATCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASRSRAS*SSPSSS
Trigger: GGAGCTGGATGGGCTAGAGCAGGATGCCCTGGACCT...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCTGTGATTCCTCACAATaGCCATGCCAGGCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGCDSSQ*PCQAFP
Trigger: AGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACA...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTCCTGACCTCGTGATCTaGTCGCCTCGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLPDLVI*SPRPPK
Trigger: TTTGGGAGGCCGAGGCGAGCAGATCACGAGGTCAGG...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTACGTCCGGGCAGAGGCTaGAACCGGACCGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLRPGRG*NRTGPG
Trigger: GCCAGGCCCGGTCCGGTTCCAGCCTCTGCCCGGACG...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTACCCGCGGTCAGCCATaGCCAGGCCGGCTAGCGTCC +
Preference number: 4 (lower is better)
Translates to: CEFKFAGLSIYCTKTSRATRGQP*PGRLAS
Trigger: GGACGCTAGCCGGCCTGGCCATGGCTGACCGCGGGT...AGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCATGGGTGCAGCGGCCGTaGTTTGTGAGGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSWVQRP*FVRAQE
Trigger: TTCCTGGGCCCTCACAAACCACGGCCGCTGCACCCA...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp ATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCGGCTCGACGCTGGAATaGCTCTGGAGCGGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: MKNTDKQSWSQGGPGGTSGSTLE*LWSGVE
Trigger: CTCCACTCCGCTCCAGAGCCATTCCAGCGTCGAGCC...GCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTTCCTCCCAGATCAGGTaGCCTGCGGATGGCGACAGT +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASSSQIR*PADGDS
Trigger: ACTGTCGCCATCCGCAGGCCACCTGATCTGGGAGGA...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACAGGACTGCTTTTCTTaGAGGTGGTCCTCCCAGATC +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAQDCFS*RWSSQI
Trigger: GATCTGGGAGGACCACCTCCAAGAAAAGCAGTCCTG...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTCCACGGCCAGTGCGGTaGCCACAACGTCATCTGCAT +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLPRPVR*PQRHLH
Trigger: ATGCAGATGACGTTGTGGCCACCGCACTGGCCGTGG...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACTCGCTGTCCTCCAGGTaGGCGAGCTCTCTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHSLSSR*ASSLPE
Trigger: TTCCGGGAGAGAGCTCGCCCACCTGGAGGACAGCGA...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGTTCATCTCCGGCACCTaGGCCGGTGTGCTGCGCTCA +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQFISGT*AGVLRS
Trigger: TGAGCGCAGCACACCGGCCCAGGTGCCGGAGATGAA...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCTGTGAGCAGGGAGGATaGGTCCAGCTTGCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGCEQGG*VQLASF
Trigger: AAAGGAAGCAAGCTGGACCCATCCTCCCTGCTCACA...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCTGGCTGATTTGGATCTaGTTGCTGAACTTCCAACAA +
Preference number: 4 (lower is better)
Translates to: EDRAGQANHLALGVEWGCWLIWI*LLNFQQ
Trigger: TTGTTGGAAGTTCAGCAACCAGATCCAAATCAGCCA...GCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp ACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCCATATCCTTTTTGAGTaGTGTCACCTTCCGACAGCT +
Preference number: 4 (lower is better)
Translates to: TSRAANEGIYSRRGGPQRHILFE*CHLPTA
Trigger: AGCTGTCGGAAGGTGACATCACTCAAAAAGGATATG...GCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTAGAGCCCTCATCTTCTaGGGCAGACGACGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLRALIF*GRRRVW
Trigger: CCAGACACGTCGTCTGCCTCAGAAGATGAGGGCTCT...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCGGAGGATGCAGAGGATaGGGTGGACGAGCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: ASTPLSIKELAEEALCVTGGCRG*GGRALN
Trigger: ATTCAGGGCTCGTCCACCTCATCCTCTGCATCCTCC...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACGGTCTCCCTCCCGGGTaGGATGAGGTGGAGGATGCA +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHGLPPG*DEVEDA
Trigger: TGCATCCTCCACCTCATCTCACCCGGGAGGGAGACC...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GCAATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAATGCGTGGGACACTGTaGCCCCCACCGTACTGCCTT +
Preference number: 4 (lower is better)
Translates to: AMKNTDKQSWSQGGPGGTMRGTL*PPPYCL
Trigger: AAGGCAGTACGGTGGGGGTCACAGTGTCCCACGCAT...TGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCATTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp GGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCTGAACAGTAAGGACTaGCAACTTTTCTTCAGTATC +
Preference number: 4 (lower is better)
Translates to: GGPGGTSQPLGTWSGVGVLNSKD*QLFFSI
Trigger: GATACTGAAGAAAAGTTGTCAGTCCTTACTGTTCAG...CACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTGCAGGCCTGTCCTGGTaGATGGCCTGTCAAAGATGG +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASAGLSW*MACQRW
Trigger: CCATCTTTGACAGGCCATTCACCAGGACAGGCCTGC...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTGTTCCCCACGATCATTaGGGCTGGTCCAACCTCTGG +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASVPHDH*GWSNLW
Trigger: CCAGAGGTTGGACCAGCCTCAATGATCGTGGGGAAC...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTTCTCTCCCGGAAGCCTaGGCGATTCTCTTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLSLPEA*AILFPA
Trigger: TGCTGGGAAGAGAATCGCTCAGGCTTCCGGGAGAGA...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCAGGTTGCAGTGCTTGTaGCGGTGCCCTTGGCGTTCA +
Preference number: 4 (lower is better)
Translates to: ASTPLSIKELAEEALCVTRLQCL*RCPWRS
Trigger: TGAACGCCAAGGGCACCGTCACAAGCACTGCAACCT...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCACATAGAACGCGGCAATaGGGTCCACCCCTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSHRTRQ*GPPLVG
Trigger: ACCCACCAGGGGTGGACCTCATTGCCGCGTTCTATG...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACACGGGGGCACCAGCACTaGTTGGTGTCCCGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTRGHQH*LVSRVD
Trigger: GTCTACTCGGGACACCAATCAGTGCTGGTGCCCCCG...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGTGAAACAGAAGTaGGGCAGCTGGTTTGTACTC +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAPVKQK*GSWFVL
Trigger: GAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGG...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTGTGGGCCTCGAGGCCTaGGAGTGCAGTGGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATVGLEA*ECSGSG
Trigger: GCCGCTACCACTGCACTCGCAGGCCTCGAGGCCCAC...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACGTGGGCCTCGAGGCCTaGGAGTGCAGTGGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHVGLEA*ECSGSG
Trigger: GCCGCTACCACTGCACTCGCAGGCCTCGAGGCCCAC...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAGTGGGCCTCGAGGCCTaGGAGTGCAGTGGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: NSSLLGFPSTAQRLPELQVGLEA*ECSGSG
Trigger: GCCGCTACCACTGCACTCGCAGGCCTCGAGGCCCAC...TTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp ACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGTCAGGAGGGGCAGAATaGAGATCTATGTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: TKTSRAANEGIYSRRGGPSGGAE*RSMWVW
Trigger: CCACACCCACATAGATCTGCATTCTGCCCCTCCTGA...CGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435722.7
CDS-3UTR GCA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCATTTGGGCTGTGTTGTaGCCCAGCGCTGCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: ASTPLSIKELAEEALCVTIWAVL*PSAARW
Trigger: CCACCTTGCAGCGCTGGGGCACAACACAGCCCAAAT...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGAGAAGACTCCACAGCTaGCCAGCAGAAACCCAACCT +
Preference number: 4 (lower is better)
Translates to: TKTSRAANEGIYSRRGGPRRLHS*PAETQP
Trigger: AGGTTGGGTTTCTGCTGGGCAGCTGTGGAGTCTTCT...CGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp ATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGTTAACACGCCATaGCACAGACCAGCATCCCTT +
Preference number: 4 (lower is better)
Translates to: INKAGAREDRAGQANHLALVNTP*HRPASL
Trigger: AAGGGATGCTGGTCTGTGGCATGGCGTGTTAACAAG...TGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAGTACGCTGTGCCAGTTaGACTGGAACTGACGCATAT +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAVRCAS*TGTDAY
Trigger: ATATGCGTCAGTTCCAGTGCAACTGGCACAGCGTAC...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACGAGGCATCCGGCCGCTaGTCAGCCACCAGGACAATC +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHEASGR*SATRTI
Trigger: GATTGTCCTGGTGGCTGAGCAGCGGCCGGATGCCTC...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTCGCCCACCTGGTGGATaGTATCAATGGCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTRPPGG*YQWPAA
Trigger: TGCTGCAGGCCATTGATAGCATCCACCAGGTGGGCG...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTGAACAGGAACTTCCGTaGCTGGTCGCTGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLEQELP*LVAVLQ
Trigger: CTGGAGGACAGCGACCAGGCACGGAAGTTCCTGTTC...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTGAACAGGAACTTCCGTaGCTGGTCGCTGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASEQELP*LVAVLQ
Trigger: CTGGAGGACAGCGACCAGGCACGGAAGTTCCTGTTC...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTCAGCTGGACACAGGTTaGAGTGCTTGTGACGGTGCC +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTQLDTG*SACDGA
Trigger: GGCACCGTCACAAGCACTGCAACCTGTGTCCAGCTG...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTGCTGAAGTCCAAGTATaGGAGGACATCGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTAEVQV*EDIGGG
Trigger: CCCTCCCCCGATGTCCTCGCATACTTGGACTTCAGC...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCACCTCGGCGACCACCATaGACGTGCGCACACATGACA +
Preference number: 4 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSPRRPP*TCAHMT
Trigger: TGTCATGTGTGCGCACGTGCATGGTGGTCGCCGAGG...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTCCCAACCACATACAGTaGATCGTGCCGCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLPNHIQ*IVPPST
Trigger: AGTGGAGGGCGGCACGATGCACTGTATGTGGTTGGG...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGAGGTCCAGGGCATCCTaGTCTAGCCCATCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQRSRAS*SSPSSS
Trigger: GGAGCTGGATGGGCTAGAGCAGGATGCCCTGGACCT...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAGGATGGGTCCAGCTTaGTTCCTTTTTCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGRMGPA*FLFPSA
Trigger: GGCTGATGGAAAAAGGAAGCAAGCTGGACCCATCCT...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCCGCAGCGCATCACCTaGCTCTGTAGACAAACTTCA +
Preference number: 4 (lower is better)
Translates to: TKTSRAANEGIYSRRGGPPQRIT*LCRQTS
Trigger: TGAAGTTTGTCTACAGAGGCAGGTGATGCGCTGCGG...CGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp TTTGCAATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGCATCCCTCGAGGCGGTaGGCCGAGACTTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FAMKNTDKQSWSQGGPGGHPSRR*AETSAA
Trigger: AGCAGCAGAAGTCTCGGCCCACCGCCTCGAGGGATG...CCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCATTGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTTGCACGGCTTCAGTGTaGACATCTGACCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLCTASV*TSDRKR
Trigger: GCGCTTCCGGTCAGATGTCCACACTGAAGCCGTGCA...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTACGCTGGAATGGCTCTaGAGCGGAGTGGAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASTLEWL*SGVEVS
Trigger: ACTCACCTCCACTCCGCTCCAGAGCCATTCCAGCGT...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp ATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACACAGAAGCCACCTGTaGACGCTCAAAGTACGAATG +
Preference number: 4 (lower is better)
Translates to: INKAGAREDRAGQANHLAHRSHL*TLKVRM
Trigger: CATTCGTACTTTGAGCGTCCACAGGTGGCTTCTGTG...TGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTCAGTGGAGGGCGCTTTaGCCTCTTCAGGGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTQWRAL*PLQGVQ
Trigger: CTGAACACCCTGAAGAGGCCAAAGCGCCCTCCACTG...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACCCCAGCGCTGCAAGGTaGCCAACAGCGACGGCGGTC +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHPSAAR*PTATAV
Trigger: GACCGCCGTCGCTGTTGGCCACCTTGCAGCGCTGGG...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTTCAGACAGGGGGATTTaGGCTGTGTTGTGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTSDRGI*AVLCPS
Trigger: GCTGGGGCACAACACAGCCCAAATCCCCCTGTCTGA...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAGAAACCCAACCTGCTaGCTGCCTGCATCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGRNPTC*LPASFL
Trigger: AAGAAAGGATGCAGGCAGCCAGCAGGTTGGGTTTCT...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACTCCTCCCAGATCAGGTaGCCTGCGGATGGCGACAGT +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHSSQIR*PADGDS
Trigger: ACTGTCGCCATCCGCAGGCCACCTGATCTGGGAGGA...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp ATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCTCCTCCCAGATCAGGTaGCCTGCGGATGGCGACAGT +
Preference number: 4 (lower is better)
Translates to: MKNTDKQSWSQGGPGGTSSSQIR*PADGDS
Trigger: ACTGTCGCCATCCGCAGGCCACCTGATCTGGGAGGA...GCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp AAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACGGCCAGTGCGGTaGCCACAACGTCATCTGCAT +
Preference number: 4 (lower is better)
Translates to: KNTDKQSWSQGGPGGTSQPRPVR*PQRHLH
Trigger: ATGCAGATGACGTTGTGGCCACCGCACTGGCCGTGG...TTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAGGCTGGTCCAACCTCTaGTTGTTTCTGACGAGGTTT +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAGWSNL*LFLTRF
Trigger: AAACCTCGTCAGAAACAACCAGAGGTTGGACCAGCC...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAGGAACTTCCGTGCCTaGTCGCTGTCCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHRNFRA*SLSSRW
Trigger: CCACCTGGAGGACAGCGACCAGGCACGGAAGTTCCT...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTAGCAAGAACAGCGGGTaGTCAGGAGTGGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLSKNSG*SGVVWA
Trigger: TGCCCACACCACTCCTGACCACCCGCTGTTCTTGCT...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCAGAGGTCCACCCCTGGTaGGTAGACCAGAGCCACATG +
Preference number: 4 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSEVHPW*VDQSHM
Trigger: CATGTGGCTCTGGTCTACCCACCAGGGGTGGACCTC...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTGGGTCAGCGCAATCCTaGGCCGCTCCTCGGCGACCA +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATGSAQS*AAPRRP
Trigger: TGGTCGCCGAGGAGCGGCCCAGGATTGCGCTGACCC...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTAGCTTGGAGAAGGACTaGGTCAGCGCAATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTSLEKD*VSAILG
Trigger: GCCCAGGATTGCGCTGACCCAGTCCTTCTCCAAGCT...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTGATAGGGATCACCCCTaGGTCCACGATGACCACCAC +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTDRDHP*VHDDHH
Trigger: GTGGTGGTCATCGTGGACCCAGGGGTGATCCCTATC...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCCACACCTTGGACTGCTaGGGCTCATTCATCTCCGGC +
Preference number: 4 (lower is better)
Translates to: ASTPLSIKELAEEALCVTHTLDC*GSFISG
Trigger: GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTG...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTCACACCTTGGACTGCTaGGGCTCATTCATCTCCGGC +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLHTLDC*GSFISG
Trigger: GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTG...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCCACAGTCCAACACCATaGGGAAACAGGGCTACTATG +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGHSPTP*GNRATM
Trigger: CATAGTAGCCCTGTTTCCCCATGGTGTTGGACTGTG...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTGGACGAGCCCTGAATaGCCCGGTCGAGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHWTSPE*PGRARA
Trigger: AGCCCTGGCTCGACCGGGTCATTCAGGGCTCGTCCA...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCTGGACGAGCCCTGAATaGCCCGGTCGAGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GFVNSSLLGFPSTAQRLPWTSPE*PGRARA
Trigger: AGCCCTGGCTCGACCGGGTCATTCAGGGCTCGTCCA...GGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp AAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGAGGTGGACGAGCCCTaGATGACCCGGTCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: KFAGLSIYCTKTSRAANEEVDEP*MTRSSQ
Trigger: CTGGCTCGACCGGGTCATTCAGGGCTCGTCCACCTC...TTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACGGAGGATGCAGAGGATaGGGTGGACGAGCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHGGCRG*GGRALN
Trigger: ATTCAGGGCTCGTCCACCTCATCCTCTGCATCCTCC...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGGGGACACCTGCAGTaGGAGGCTCCCCTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: FPSTAQRLPELQMKESTPGGHLQ*EAPLSA
Trigger: TGCTGAGAGGGGAGCCTCTCACTGCAGGTGTCCCCC...GGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTAGGGGGACACCTGCAGTaGGAGGCTCCCCTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLGGHLQ*EAPLSA
Trigger: TGCTGAGAGGGGAGCCTCTCACTGCAGGTGTCCCCC...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCCAGCTTCATAAAATGCAACCATaGACATCACAGGGTCACTAT +
Preference number: 4 (lower is better)
Translates to: RAGQANHLALGVEWGCQLHKMQP*TSQGHY
Trigger: ATAGTGACCCTGTGATGTTCATGGTTGCATTTTATG...AAGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp TGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTTCCCTCTGGCCCCGCTaGGCTAGGAGAGACCAGTGC +
Preference number: 4 (lower is better)
Translates to: CEFKFAGLSIYCTKTSRASLWPR*ARRDQC
Trigger: GCACTGGTCTCTCCTAGCTCAGCGGGGCCAGAGGGA...AGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp AATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAATCCCTCTGGCCCCGCTaGGCTAGGAGAGACCAGTGC +
Preference number: 4 (lower is better)
Translates to: NSSLLGFPSTAQRLPELQSLWPR*ARRDQC
Trigger: GCACTGGTCTCTCCTAGCTCAGCGGGGCCAGAGGGA...TTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACAGTTGCACTGGAACTaGCGCATATTTCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAQLHWN*RIFLPL
Trigger: AAGTGGGAGAAATATGCGTCAGTTCCAGTGCAACTG...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGGTGCTCCTCCTGTGGTaGCCGGAACTGCCTCAAACA +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQVLLLW*PELPQT
Trigger: TGTTTGAGGCAGTTCCGGTCACCACAGGAGGAGCAC...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTGGTTGTCAGGCCCGATaGAGCCCAGCAGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATGCQAR*SPAGLS
Trigger: GGACAGGCCTGCTGGGCTTCATCGGGCCTGACAACC...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp ATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCGTCTGCGAACTCCAGTaGCCATCAGCCCGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: MKNTDKQSWSQGGPGGTSVCELQ*PSARPV
Trigger: AACTGGACGGGCTGATGGTCACTGGAGTTCGCAGAC...GCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGGCGGGGGCCGCACGGTaGCAGGCACGCAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMAGAAR*QARSHS
Trigger: ACTGTGGCTGCGTGCCTGTCACCGTGCGGCCCCCGC...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGGTGGTGCCGAGGTTCTaGGGGTGCGGGGGCCGCACG +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMVVPRF*GCGGRT
Trigger: CGTGCGGCCCCCGCACCCTCAGAACCTCGGCACCAC...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACACCTCCACGATCATCTTaGCGGTGGGCAGTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTPPRSS*RWAVWC
Trigger: GCACCACACTGCCCACCGTCAAGATGATCGTGGAGG...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTAGGCAGATGGCCACGTTaGCCCTGCACCCGAACGTGG +
Preference number: 4 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLGRWPR*PCTRTW
Trigger: CCACGTTCGGGTGCAGGGTCAACGTGGCCATCTGCC...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTCCATCAGCCTCCCTGTaGAACAGAAGTGAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTPSASL*NRSEAA
Trigger: AGCTGCCTCACTTCTGTTTCACAGGGAGGCTGATGG...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGTTCCCGAGCTGCAAATaGAGGAATCTACTCCCGGCG +
Preference number: 4 (lower is better)
Translates to: YCTKTSRAANEGIYSRRGFPSCK*RNLLPA
Trigger: CGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAA...CCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp GGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGGCCGAGACTTCTGCTaGTTGGGTGCAGCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: GFVNSSLLGFPSTAQRLPGRDFC*LGAAAV
Trigger: CACGGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCC...GGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp TTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGTGGGCCGAGACTTCTaGTGCTTGGGTGCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: FKFAGLSIYCTKTSRAANVGRDF*CLGAAA
Trigger: GGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCCCAC...ATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp ACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGGTATTTGGCCAAAGCTaGTTGCACGGCTTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: TKTSRAANEGIYSRRGGPVFGQS*LHGFSV
Trigger: CACACTGAAGCCGTGCAAGCAGCTTTGGCCAAATAC...CGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCACGCTCAAAGTACGAATaGTCCACGAGGCCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSRSKYE*STRPVV
Trigger: CACCACGGGCCTCGTGGAGCATTCGTACTTTGAGCG...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCCGGTCGGGGGACACCTaGAGTGAGAGGCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: FPSTAQRLPELQMKESTPRSGDT*SERLPS
Trigger: AGAGGGGAGCCTCTCACTGCAGGTGTCCCCCGACCG...GGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp ACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCGAGACACCCATAAAATaGAACCATGAACATCACAGG +
Preference number: 4 (lower is better)
Translates to: TSRAANEGIYSRRGGPQRETPIK*NHEHHR
Trigger: CCTGTGATGTTCATGGTTGCATTTTATGGGTGTCTC...GCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp ATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACACCCAACCTGCTGGCTaGCTGCATCCTTTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: IQINKAGAREDRAGQANHTQPAG*LHPFLL
Trigger: TAACAAGAAAGGATGCAGGCAGCCAGCAGGTTGGGT...GTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp CTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTTCCTGGGCCAGAGGGTaGCAGTCCTTTGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LGFPSTAQRLPELQMKESSWARG*QSFGGL
Trigger: CAAGCCCCCAAAGGACTGGCACCCTCTGGCCCAGGA...AGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp AAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAACAGAGCCCGGCACTGTaGCAGCAGGGATGCGTGGGA +
Preference number: 4 (lower is better)
Translates to: KFAGLSIYCTKTSRAANEQSPAL*QQGCVG
Trigger: TCCCACGCATCCCTGCTGGCACAGTGCCGGGCTCTG...TTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTGCTAGGAGAGACCAGTaGATGTCTCGCGACTTCACC +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTARRDQ*MSRDFT
Trigger: GGTGAAGTCGCGAGACATGCACTGGTCTCTCCTAGC...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTGGGCTCCACGGCCAGTaGGGTGGCCACAACGTCATC +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATGLHGQ*GGHNVI
Trigger: GATGACGTTGTGGCCACCGCACTGGCCGTGGAGCCC...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGCGCCCACCTGGTGGATaGTATCAATGGCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQRPPGG*YQWPAA
Trigger: TGCTGCAGGCCATTGATAGCATCCACCAGGTGGGCG...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCACGTGGTGAGGACGCATaGAGACTTGCTGACCTCCAC +
Preference number: 4 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSRGEDA*RLADLH
Trigger: GTGGAGGTCAGCAAGTCTGCATGCGTCCTCACCACG...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTGCCACAGGGACACGTTaGTCTCCAGCTCCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATATGTR*SPAPAG
Trigger: CCCCGCTGGAGCTGGAGAGCAACGTGTCCCTGTGGC...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCCGCCTAGGCCCTTGGTaGACATCTCCATCACAGAGT +
Preference number: 4 (lower is better)
Translates to: ASTPLSIKELAEEALCVTRLGPW*TSPSQS
Trigger: ACTCTGTGATGGAGATGTGCACCAAGGGCCTAGGCG...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTCGACCACCATGCACGTaGGCACACATGACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLRPPCT*AHMTGS
Trigger: TGAACCTGTCATGTGTGCGCACGTGCATGGTGGTCG...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCAAGGTAGCCGGTCCTTaGCCAGATGGTCTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: ASTPLSIKELAEEALCVTKVAGP*PDGLCV
Trigger: GACACACAGACCATCTGGGCAAGGACCGGCTACCTT...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTACATACAGTGCATCGTaGCGCCCTCCACTGGCATCA +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTTYSAS*RPPLAS
Trigger: TGATGCCAGTGGAGGGCGGCACGATGCACTGTATGT...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTGGCAATGCTGTTCCCTaGTCCCCTCAACTGTACTGC +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASGNAVP*SPQLYC
Trigger: GCAGTACAGTTGAGGGGAGCAGGGAACAGCATTGCC...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCGAAACAGGGCTACTATaGACAGTGCTATTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGETGLL*TVLFVA
Trigger: GGCTACAAATAGCACTGTGCATAGTAGCCCTGTTTC...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGTGCACGGCTTCAGTGTaGACATCTGACCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQCTASV*TSDRKR
Trigger: GCGCTTCCGGTCAGATGTCCACACTGAAGCCGTGCA...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGCGTGGCTGCAGCACTaGGAGCAGTGGTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: FKFAGLSIYCTKTSRAANAWLQH*EQWWVS
Trigger: GGAGACCCACCACTGCTCCCAGTGCTGCAGCCACGC...ATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTAGCGTGGCTGCAGCACTaGGAGCAGTGGTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLAWLQH*EQWWVS
Trigger: GGAGACCCACCACTGCTCCCAGTGCTGCAGCCACGC...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAGATCTATGTGGGTGTaGGCCTCGAGGCCTGCGAGT +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHRSMWV*ASRPAS
Trigger: ACTCGCAGGCCTCGAGGCCCACACCCACATAGATCT...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp ATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCAGATCTATGTGGGTGTaGGCCTCGAGGCCTGCGAGT +
Preference number: 4 (lower is better)
Translates to: MKNTDKQSWSQGGPGGTSRSMWV*ASRPAS
Trigger: ACTCGCAGGCCTCGAGGCCCACACCCACATAGATCT...GCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGAGATCTATGTGGGTGTaGGCCTCGAGGCCTGCGAGT +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQRSMWV*ASRPAS
Trigger: ACTCGCAGGCCTCGAGGCCCACACCCACATAGATCT...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTGAATGCAGATCTATGTaGGTGTGGGCCTCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLECRSM*VWASRP
Trigger: AGGCCTCGAGGCCCACACCCACATAGATCTGCATTC...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCGAATGCAGATCTATGTaGGTGTGGGCCTCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: ASTPLSIKELAEEALCVTECRSM*VWASRP
Trigger: AGGCCTCGAGGCCCACACCCACATAGATCTGCATTC...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGCAGTGGAGGGCGCTTTaGCCTCTTCAGGGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQQWRAL*PLQGVQ
Trigger: CTGAACACCCTGAAGAGGCCAAAGCGCCCTCCACTG...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACGAGTACCCGCACGCCTaGGTCAGAGCCCGGCACTGT +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHEYPHA*VRARHC
Trigger: ACAGTGCCGGGCTCTGACCCAGGCGTGCGGGTACTC...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTAGATCGACCACGGGTTaGCACCATCGGCCACAATCA +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASRSTTG*HHRPQS
Trigger: TGATTGTGGCCGATGGTGCCAACCCGTGGTCGATCT...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTAGGACAGATGACCTCTaGCCTCAGACCTCTGGACTG +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASRTDDL*PQTSGL
Trigger: CAGTCCAGAGGTCTGAGGCCAGAGGTCATCTGTCCT...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTCAGGTGGCCTGCGGATaGCGACAGTCAGCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATQVACG*RQSAPQ
Trigger: CTGAGGCGCTGACTGTCGCCATCCGCAGGCCACCTG...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAACAGGTGGCCTGCGGATaGCGACAGTCAGCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KFAGLSIYCTKTSRAANEQVACG*RQSAPQ
Trigger: CTGAGGCGCTGACTGTCGCCATCCGCAGGCCACCTG...TTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTGCCTGTCCTGGTGAATaGCCTGTCAAAGATGGGTGC +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLACPGE*PVKDGC
Trigger: GCACCCATCTTTGACAGGCCATTCACCAGGACAGGC...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGCCTGTCCTGGTGAATaGCCTGTCAAAGATGGGTGC +
Preference number: 4 (lower is better)
Translates to: YCTKTSRAANEGIYSRRGACPGE*PVKDGC
Trigger: GCACCCATCTTTGACAGGCCATTCACCAGGACAGGC...CCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACACCACGGCCAGTGCGGTaGCCACAACGTCATCTGCAT +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTPRPVR*PQRHLH
Trigger: ATGCAGATGACGTTGTGGCCACCGCACTGGCCGTGG...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTGGTGGATGCTATCAATaGCCTGCAGCACACGGCTCA +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASGGCYQ*PAAHGS
Trigger: TGAGCCGTGTGCTGCAGGCCATTGATAGCATCCACC...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTTACACGCCCACCTGGTaGATGCTATCAATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTYTPTW*MLSMAC
Trigger: GCAGGCCATTGATAGCATCCACCAGGTGGGCGTGTA...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTCAGTACACGCCCACCTaGTGGATGCTATCAATGGCC +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLQYTPT*WMLSMA
Trigger: GGCCATTGATAGCATCCACCAGGTGGGCGTGTACTG...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTCAGTACACGCCCACCTaGTGGATGCTATCAATGGCC +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASQYTPT*WMLSMA
Trigger: GGCCATTGATAGCATCCACCAGGTGGGCGTGTACTG...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACAGGAACTTCCGTGCCTaGTCGCTGTCCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHRNFRA*SLSSRW
Trigger: CCACCTGGAGGACAGCGACCAGGCACGGAAGTTCCT...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGAGCAAGAACAGCGGGTaGTCAGGAGTGGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQSKNSG*SGVVWA
Trigger: TGCCCACACCACTCCTGACCACCCGCTGTTCTTGCT...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAATGAGGTCCACCCCTaGTGGGTAGACCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHNEVHP*WVDQSH
Trigger: GTGGCTCTGGTCTACCCACCAGGGGTGGACCTCATT...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGGGCATAAGGCGCTTGTaGCCGCGTGCGACATCTTCA +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQGIRRL*PRATSS
Trigger: TGAAGATGTCGCACGCGGCCACAAGCGCCTTATGCC...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAAACGAACCCTGTCATaGCGCAGTGCCCGCATGTCC +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHKRTLS*RSARMS
Trigger: GGACATGCGGGCACTGCGCCATGACAGGGTTCGTTT...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTTCCAGACTCCATCAATaGCAGGCTGTGCGGAGAACC +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASSRLHQ*QAVRRT
Trigger: GGTTCTCCGCACAGCCTGCCATTGATGGAGTCTGGA...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCATACCCGGTGGCATTGTaGGGGCTGCTTACCCAGATC +
Preference number: 4 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSYPVAL*GLLTQI
Trigger: GATCTGGGTAAGCAGCCCCCACAATGCCACCGGGTA...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTCAAGCTCCGCCTCCCTaGTTCATACCATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTQAPPP*FIPFSC
Trigger: GCAGGAGAATGGTATGAACCAGGGAGGCGGAGCTTG...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCAGGCTTTGGCTGATTTaGATCTGGTTGCTGAACTTC +
Preference number: 4 (lower is better)
Translates to: RLPELQMKESTPGVGVRSRLWLI*IWLLNF
Trigger: GAAGTTCAGCAACCAGATCCAAATCAGCCAAAGCCT...GCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCAGGCTTTGGCTGATTTaGATCTGGTTGCTGAACTTC +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGRLWLI*IWLLNF
Trigger: GAAGTTCAGCAACCAGATCCAAATCAGCCAAAGCCT...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCAATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACACAACCACTTGGCACTTaGAGTGGAGTGGGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: AMKNTDKQSWSQGGPGGTQPLGT*SGVGVP
Trigger: TGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTG...TGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCATTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAGCTTTCCCAGCCTGTTaGGCTGGAGGCAGATGGCCA +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTAFPAC*AGGRWP
Trigger: TGGCCATCTGCCTCCAGCCCAACAGGCTGGGAAAGC...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651436.1
CDS-3UTR TCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACAGAGCCCTCATCTTCTaGGGCAGACGACGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHRALIF*GRRRVW
Trigger: CCAGACACGTCGTCTGCCTCAGAAGATGAGGGCTCT...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACGGAGCGGAGTGGAGGTaGGTCGCCCGGGTCGCCGTA +
Preference number: 4 (lower is better)
Translates to: SRLILEKPGCFCEACMIHGAEWR*VARVAV
Trigger: TACGGCGACCCGGGCGACTCACCTCCACTCCGCTCC...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp ACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCCATAAAATGCAACCATaGACATCACAGGGTCACTAT +
Preference number: 4 (lower is better)
Translates to: TSRAANEGIYSRRGGPQRHKMQP*TSQGHY
Trigger: ATAGTGACCCTGTGATGTTCATGGTTGCATTTTATG...GCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp AAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGCGGGGGCCAACCTTTaGAAGCTGCCACCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KFAGLSIYCTKTSRAANEAGANL*KLPPLL
Trigger: CAGGAGAGGTGGCAGCTTTCAAAGGTTGGCCCCCGC...TTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCGACCAGCATCCCTTTTaGAATCCAGCACGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGDQHPF*NPARLL
Trigger: TAACAAACGTGCTGGATTTCAAAAGGGATGCTGGTC...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAGACCAGCATCCCTTTTaGAATCCAGCACGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPADQHPF*NPARLL
Trigger: TAACAAACGTGCTGGATTTCAAAAGGGATGCTGGTC...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACAATCAGCATGCGCAGTaGGCTGAGGCTGACGTCCCT +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHNQHAQ*AEADVP
Trigger: AGGGACGTCAGCCTCAGCTCACTGCGCATGCTGATT...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TTTGCAATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGGTGCTCCTCCTGTGGTaGCCGGAACTGCCTCAAACA +
Preference number: 4 (lower is better)
Translates to: FAMKNTDKQSWSQGGPGGVLLLW*PELPQT
Trigger: TGTTTGAGGCAGTTCCGGTCACCACAGGAGGAGCAC...CCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCATTGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACACCAGTTTGCCCACGATaGAGACCAGGTTGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTPVCPR*RPGCQA
Trigger: GGCCTGACAACCTGGTCTTCATCGTGGGCAAACTGG...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGGCGGGGGCCGCACGGTaGCAGGCACGCAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWAGAAR*QARSHS
Trigger: ACTGTGGCTGCGTGCCTGTCACCGTGCGGCCCCCGC...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTCAGTGGTTGACACGCTaGAGTCCAAGTATGCGAGGA +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLQWLTR*SPSMRG
Trigger: TCCTCGCATACTTGGACTTCAGCGTGTCAACCACTG...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCCAGTGGTTGACACGCTaGAGTCCAAGTATGCGAGGA +
Preference number: 4 (lower is better)
Translates to: ASTPLSIKELAEEALCVTQWLTR*SPSMRG
Trigger: TCCTCGCATACTTGGACTTCAGCGTGTCAACCACTG...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACGCAGGTTGGTCCAGGTaGATACGGCACACTCAGCGA +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHAGWSR*IRHTQR
Trigger: TCGCTGAGTGTGCCGTATTCACCTGGACCAACCTGC...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAGCAGGTTGGTCCAGGTaGATACGGCACACTCAGCGA +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTAGWSR*IRHTQR
Trigger: TCGCTGAGTGTGCCGTATTCACCTGGACCAACCTGC...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTGCGAGTCCCGGTGAGTaGGCTCTGCGGTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: AQLARLMCGELITALLGTASPGE*ALRCLP
Trigger: GGGAAGACACCGCAGAGCTCACTCACCGGGACTCGC...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTTTGGCCAAAGCTGCTTaGACGGCTTCAGTGTGGACA +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTLAKAA*TASVWT
Trigger: TGTCCACACTGAAGCCGTGCAAGCAGCTTTGGCCAA...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACCTCGAGGCCTGCGAGTaGAGTGGTAGCGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: SRLILEKPGCFCEACMIHLEACE*SGSGGP
Trigger: GGGGCCGCCGCTACCACTGCACTCGCAGGCCTCGAG...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACGTTGTGCCCCAGCGCTaGAAGGTGGCCAACAGCGAC +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHVVPQR*KVANSD
Trigger: GTCGCTGTTGGCCACCTTGCAGCGCTGGGGCACAAC...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAATTTGGGCTGTGTTGTaGCCCAGCGCTGCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTIWAVL*PSAARW
Trigger: CCACCTTGCAGCGCTGGGGCACAACACAGCCCAAAT...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTAGCAGAAACCCAACCTaGTGGCTGCCTGCATCCTTT +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLSRNPT*WLPASF
Trigger: AAAGGATGCAGGCAGCCAGCAGGTTGGGTTTCTGCT...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTCCTGGGCCAGAGGGTaGCAGTCCTTTGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHSWARG*QSFGGL
Trigger: CAAGCCCCCAAAGGACTGGCACCCTCTGGCCCAGGA...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAAGCTAGGAGAGACCAGTaGATGTCTCGCGACTTCACC +
Preference number: 4 (lower is better)
Translates to: KNTDKQSWSQGGPGGTSQARRDQ*MSRDFT
Trigger: GGTGAAGTCGCGAGACATGCACTGGTCTCTCCTAGC...TTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp TACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGCCACAACGTCATCTaGATTGTGTCTGCGAACTCC +
Preference number: 4 (lower is better)
Translates to: YCTKTSRAANEGIYSRRGGHNVI*IVSANS
Trigger: GGAGTTCGCAGACACAATGCAGATGACGTTGTGGCC...CCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp ATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCAAGAACACAGCGATCCTaGCTCTGTAGACAAACTTCA +
Preference number: 4 (lower is better)
Translates to: INKAGAREDRAGQANHLARTQRS*LCRQTS
Trigger: TGAAGTTTGTCTACAGAGGCAGGATCGCTGTGTTCT...TGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTAGCACATTACACGGGTaGAGCGTCCCTTCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLSTLHG*SVPSRK
Trigger: CTTTCTGGAAGGGACGCTGCACCCGTGTAATGTGCT...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACGCGCTTGTGGCCGCGTaGGACATCTTCACTCCCGCT +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHALVAA*DIFTPA
Trigger: AGCGGGAGTGAAGATGTCGCACGCGGCCACAAGCGC...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACTGGCATTGTGGGGGCTaGTTACCCAGATCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHWHCGG*LPRSLP
Trigger: TGGGAGAGATCTGGGTAAGCAGCCCCCACAATGCCA...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACCCCAACCACATACAGTaGATCGTGCCGCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHPNHIQ*IVPPST
Trigger: AGTGGAGGGCGGCACGATGCACTGTATGTGGTTGGG...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGAGCGATGCTCCTGTGTaGTCGGATGACAGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQSDAPV*SDDRGL
Trigger: GAGACCTCTGTCATCCGAGCACACAGGAGCATCGCT...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTCATCACACCTTGGACTaGTGGGGCTCATTCATCTCC +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASHHTLD*WGSFIS
Trigger: GGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATG...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTTCCCCTCAACTGTACTaGCGGTACTCACCAAACAGC +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLSPQLY*RYSPNS
Trigger: GCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGA...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp ACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACACGTCCGGGCAGAGGCTaGAACCGGACCGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: TIFRLCEFKFAGLSIYCTRPGRG*NRTGPG
Trigger: GCCAGGCCCGGTCCGGTTCCAGCCTCTGCCCGGACG...TGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCCGTCCGGGCAGAGGCTaGAACCGGACCGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVRPGRG*NRTGPG
Trigger: GCCAGGCCCGGTCCGGTTCCAGCCTCTGCCCGGACG...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAATGGGTGCAGCGGCCGTaGTTTGTGAGGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: KFAGLSIYCTKTSRAANEWVQRP*FVRAQE
Trigger: TTCCTGGGCCCTCACAAACCACGGCCGCTGCACCCA...TTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACTCAGACAGGGGGATTTaGGCTGTGTTGTGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHSDRGI*AVLCPS
Trigger: GCTGGGGCACAACACAGCCCAAATCCCCCTGTCTGA...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp ACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGTTAATGGCACTTCTATaGGGACAGGAACCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TKTSRAANEGIYSRRGGPLMALL*GQEPAL
Trigger: CAGAGCTGGTTCCTGTCCCCATAGAAGTGCCATTAA...CGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTTCTGACAAGCGTCTGTaGTCAGGGCCAAGAAGACTC +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTSDKRL*SGPRRL
Trigger: GAGTCTTCTTGGCCCTGACCACAGACGCTTGTCAGA...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCAATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACACTCCTGTCTGTGCCTTaGGGAGGCCTTTCTGACAAG +
Preference number: 4 (lower is better)
Translates to: AMKNTDKQSWSQGGPGGTLLSVP*GGLSDK
Trigger: CTTGTCAGAAAGGCCTCCCCAAGGCACAGACAGGAG...TGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCATTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp TGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGATACTGCCTTCTTTGCTaGTTTTATACTCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: WSQGGPGGTSQPLGTWSGYCLLC*FYTQCR
Trigger: CCTACATTGAGTATAAAACCAGCAAAGAAGGCAGTA...TCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGAGTACCCGCACGCCTaGGTCAGAGCCCGGCACTGT +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLEYPHA*VRARHC
Trigger: ACAGTGCCGGGCTCTGACCCAGGCGTGCGGGTACTC...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCAATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACACTCAGACCTCTGGACTaGAAGACGTTGAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: AMKNTDKQSWSQGGPGGTLRPLD*KTLRKA
Trigger: CGCCTTCCTCAACGTCTTCCAGTCCAGAGGTCTGAG...TGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCATTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCCAGGACTGCTTTTCTTaGAGGTGGTCCTCCCAGATC +
Preference number: 4 (lower is better)
Translates to: ASTPLSIKELAEEALCVTQDCFS*RWSSQI
Trigger: GATCTGGGAGGACCACCTCCAAGAAAAGCAGTCCTG...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp ATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCGCCTGTCCTGGTGAATaGCCTGTCAAAGATGGGTGC +
Preference number: 4 (lower is better)
Translates to: MKNTDKQSWSQGGPGGTSACPGE*PVKDGC
Trigger: GCACCCATCTTTGACAGGCCATTCACCAGGACAGGC...GCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACGGTGGATGCTATCAATaGCCTGCAGCACACGGCTCA +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHGGCYQ*PAAHGS
Trigger: TGAGCCGTGTGCTGCAGGCCATTGATAGCATCCACC...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGTACACGCCCACCTGGTaGATGCTATCAATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQYTPTW*MLSMAC
Trigger: GCAGGCCATTGATAGCATCCACCAGGTGGGCGTGTA...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTTCGCTGTCCTCCAGGTaGGCGAGCTCTCTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATSLSSR*ASSLPE
Trigger: TTCCGGGAGAGAGCTCGCCCACCTGGAGGACAGCGA...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTACGCGGGCCTTGTACTaGCTGACGGCCGACAGCCAC +
Preference number: 4 (lower is better)
Translates to: AQLARLMCGELITALLGTTRALY*LTADSH
Trigger: GTGGCTGTCGGCCGTCAGCCAGTACAAGGCCCGCGT...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACAGCTTGGAGAAGGACTaGGTCAGCGCAATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHSLEKD*VSAILG
Trigger: GCCCAGGATTGCGCTGACCCAGTCCTTCTCCAAGCT...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACTCCAGACTCCATCAATaGCAGGCTGTGCGGAGAACC +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHSRLHQ*QAVRRT
Trigger: GGTTCTCCGCACAGCCTGCCATTGATGGAGTCTGGA...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCATGTAGGCGACATAGATaGGGTCCAGCTGGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSCRRHR*GPAGQP
Trigger: TGGCTGACCAGCTGGACCCCATCTATGTCGCCTACA...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTTCCCACATCACACCTTaGACTGCTGGGGCTCATTCA +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASSHITP*TAGAHS
Trigger: TGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGA...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCTGGCTGATTTGGATCTaGTTGCTGAACTTCCAACAA +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGWLIWI*LLNFQQ
Trigger: TTGTTGGAAGTTCAGCAACCAGATCCAAATCAGCCA...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAGGCTTTGGCTGATTTaGATCTGGTTGCTGAACTTC +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGRLWLI*IWLLNF
Trigger: GAAGTTCAGCAACCAGATCCAAATCAGCCAAAGCCT...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCAATCTACTCCCGGCGTaGGGGTCCGCAGCGCATCAC +
Preference number: 4 (lower is better)
Translates to: FPSTAQRLPELQMKESTPNLLPA*GSAAHH
Trigger: GTGATGCGCTGCGGACCCCCACGCCGGGAGTAGATT...GGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp CTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACAGGGACACCTATGTaGGTGTGGGCCTCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LGFPSTAQRLPELQMKESTGTPM*VWASRP
Trigger: AGGCCTCGAGGCCCACACCCACATAGGTGTCCCTGT...AGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466639.5
CDS-3UTR TCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACATTCAGTGTGGACATCTaGCCGGAAGCGCTCATCCCT +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTFSVDI*PEALIP
Trigger: AGGGATGAGCGCTTCCGGTCAGATGTCCACACTGAA...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTGGAGGATGCAGAGGATaGGGTGGACGAGCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: LGFPSTAQRLPELQMKESGGCRG*GGRALN
Trigger: ATTCAGGGCTCGTCCACCTCATCCTCTGCATCCTCC...AGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp ACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGAAAGTTTACCATAGGTaGGAGTGTAGACGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: TKTSRAANEGIYSRRGGPKVYHR*ECRRLS
Trigger: GGAAAGCCGTCTACACTCTCACCTATGGTAAACTTT...CGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCCATAAAATGCAACCATaGACATCACAGGGTCACTAT +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGHKMQP*TSQGHY
Trigger: ATAGTGACCCTGTGATGTTCATGGTTGCATTTTATG...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAATGCGTGGGACACTGTaGCCCCCACCGTACTGCCTT +
Preference number: 4 (lower is better)
Translates to: KFAGLSIYCTKTSRAANEMRGTL*PPPYCL
Trigger: AAGGCAGTACGGTGGGGGTCACAGTGTCCCACGCAT...TTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGCGCGTAGGGGACGCTaGCCACGTGCATCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLARRGR*PRASCS
Trigger: TGAACAGGATGCACGTGGTCAGCGTCCCCTACGCGC...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAGTCTGCGAACTCCAGTaGCCATCAGCCCGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: EFKFAGLSIYCTKTSRAAVCELQ*PSARPV
Trigger: AACTGGACGGGCTGATGGTCACTGGAGTTCGCAGAC...TGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTTTGGTTTCAGAAATGTaGATCCCTCCGAGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTLVSEM*IPPRGA
Trigger: GGCTCCTCTCGGAGGGATTCACATTTCTGAAACCAA...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTCATAGAACGCGGCAATaGGGTCCACCCCTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATHRTRQ*GPPLVG
Trigger: ACCCACCAGGGGTGGACCTCATTGCCGCGTTCTATG...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTCCTCCACGATCATCTTaGCGGTGGGCAGTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATPPRSS*RWAVWC
Trigger: GCACCACACTGCCCACCGTCAAGATGATCGTGGAGG...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTATCACCCCCTTCATCCTaGGGACACCCGTCTGTGCGC +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLSPPSS*GHPSVR
Trigger: GCGCACAGACGGGTGTCCTCAGGATGAAGGGGGTGA...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACGATCTCTCCCAGGTGTaGGTCTCCCAAGGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHDLSQV*VSQGSF
Trigger: AAAGGACCCTTGGGAGACTCACACCTGGGAGAGATC...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTAAACTCAGCCGGGCACTaGAGTGGTCGGCATGAAGCG +
Preference number: 4 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLNSAGH*SGRHEA
Trigger: CGCTTCATGCCGACCACTTCAGTGCCCGGCTGAGTT...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAGGTACCGCATGCCTCTaGGCTCCAGAGTTTCATCCA +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTGTACL*APEFHP
Trigger: TGGATGAAACTCTGGAGCTCAGAGGCATGCGGTACC...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCAACGTGCAAGCAGCTTTaGCCTTTTCTTTTCATATCC +
Preference number: 4 (lower is better)
Translates to: INKAGAREDRAGQANHLATCKQL*PFLFIS
Trigger: GGATATGAAAAGAAAAGGGCAAAGCTGCTTGCACGT...TGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp GCAATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACATTGGCCAAAGCTGCTTaGACGGCTTCAGTGTGGACA +
Preference number: 4 (lower is better)
Translates to: AMKNTDKQSWSQGGPGGTLAKAA*TASVWT
Trigger: TGTCCACACTGAAGCCGTGCAAGCAGCTTTGGCCAA...TGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCATTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTGTATTTGGCCAAAGCTaGTTGCACGGCTTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLVFGQS*LHGFSV
Trigger: CACACTGAAGCCGTGCAAGCAGCTTTGGCCAAATAC...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACACTCGAGGCCTGCGAGTaGAGTGGTAGCGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: TIFRLCEFKFAGLSIYCTLEACE*SGSGGP
Trigger: GGGGCCGCCGCTACCACTGCACTCGCAGGCCTCGAG...TGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACACACAGGGACACCATCTaGTGTTTCCAGCATGCTCCC +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTHRDTI*CFQHAP
Trigger: GGGAGCATGCTGGAAACAGCAGATGGTGTCCCTGTG...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCGTTGTGCCCCAGCGCTaGAAGGTGGCCAACAGCGAC +
Preference number: 4 (lower is better)
Translates to: RLCEFKFAGLSIYCTKTSVVPQR*KVANSD
Trigger: GTCGCTGTTGGCCACCTTGCAGCGCTGGGGCACAAC...GGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp AAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACGACAGGAACCAGCTCTaGCAGGAGACACCCATAAAA +
Preference number: 4 (lower is better)
Translates to: KIQINKAGAREDRAGQANDRNQL*QETPIK
Trigger: TTTTATGGGTGTCTCCTGGCAGAGCTGGTTCCTGTC...GTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCAAGCAGAAACCCAACCTaGTGGCTGCCTGCATCCTTT +
Preference number: 4 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSSRNPT*WLPASF
Trigger: AAAGGATGCAGGCAGCCAGCAGGTTGGGTTTCTGCT...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCAAGAAGACTCCACAGCTaGCCAGCAGAAACCCAACCT +
Preference number: 4 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSRRLHS*PAETQP
Trigger: AGGTTGGGTTTCTGCTGGGCAGCTGTGGAGTCTTCT...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGGGGGGCTTGGCTAGATaGTTCCCATCAATCACTAGC +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQGGLAR*FPSITS
Trigger: GCTAGTGATTGATGGGAAGCATCTAGCCAAGCCCCC...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAAGGGGGCTTGGCTAGATaGTTCCCATCAATCACTAGC +
Preference number: 4 (lower is better)
Translates to: KNTDKQSWSQGGPGGTSQGGLAR*FPSITS
Trigger: GCTAGTGATTGATGGGAAGCATCTAGCCAAGCCCCC...TTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp AGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCCAGATCAGGTGGCCTaGGGATGGCGACAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: RLCEFKFAGLSIYCTKTSPDQVA*GWRQSA
Trigger: CGCTGACTGTCGCCATCCGCAGGCCACCTGATCTGG...GGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGGGCCACAACGTCATCTaGATTGTGTCTGCGAACTCC +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQGHNVI*IVSANS
Trigger: GGAGTTCGCAGACACAATGCAGATGACGTTGTGGCC...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GCAATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAGGCCACAACGTCATCTaGATTGTGTCTGCGAACTCC +
Preference number: 4 (lower is better)
Translates to: AMKNTDKQSWSQGGPGGTGHNVI*IVSANS
Trigger: GGAGTTCGCAGACACAATGCAGATGACGTTGTGGCC...TGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCATTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGAGGCATCCGGCCGCTaGTCAGCCACCAGGACAATC +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLEASGR*SATRTI
Trigger: GATTGTCCTGGTGGCTGAGCAGCGGCCGGATGCCTC...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGCTCTCAGCCCTTTTGTaGAGCTGGACACAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQLSALL*SWTQVA
Trigger: TGCAACCTGTGTCCAGCTGCACAAAAGGGCTGAGAG...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAGTCCCGAGTAGACACTaGACAGACACCACAGGGCAA +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTVPSRH*TDTTGQ
Trigger: TTGCCCTGTGGTGTCTGTGCAGTGTCTACTCGGGAC...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAATCAATGGCAGGCTGTaGGGAGAACCCCGTTCTACC +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTINGRL*GEPRST
Trigger: GGTAGAACGGGGTTCTCCGCACAGCCTGCCATTGAT...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACATCAATGGCAGGCTGTaGGGAGAACCCCGTTCTACC +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHINGRL*GEPRST
Trigger: GGTAGAACGGGGTTCTCCGCACAGCCTGCCATTGAT...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTCCTGACCTCGTGATCTaGTCGCCTCGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATPDLVI*SPRPPK
Trigger: TTTGGGAGGCCGAGGCGAGCAGATCACGAGGTCAGG...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGTCCCCTCAACTGTACTaGCGGTACTCACCAAACAGC +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQSPQLY*RYSPNS
Trigger: GCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGA...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACTTCAATACGGGGCAATaGTGTTCCCTGCTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHFNTGQ*CSLLPS
Trigger: TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAA...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGGCTTTCCATCTACTaGACAAAGACTTCCCGAGCT +
Preference number: 4 (lower is better)
Translates to: YCTKTSRAANEGIYSRRGGLSIY*TKTSRA
Trigger: AGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCC...CCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp CAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAACCCGCGGTCAGCCATaGCCAGGCCGGCTAGCGTCC +
Preference number: 4 (lower is better)
Translates to: QFLGFVNSSLLGFPSTAQTRGQP*PGRLAS
Trigger: GGACGCTAGCCGGCCTGGCCATGGCTGACCGCGGGT...TTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCTCGACGCTGGAATaGCTCTGGAGCGGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLGSTLE*LWSGVE
Trigger: CTCCACTCCGCTCCAGAGCCATTCCAGCGTCGAGCC...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAAGGCTTTGGCTGATTTaGATCTTCCAACAATTCCTC +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPARLWLI*IFQQFL
Trigger: GAGGAATTGTTGGAAGATCCAAATCAGCCAAAGCCT...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400274.5
CDS-3UTR CCA 90 bp AAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACAGAAACCCAACCTGCTaGCTGCCTGCATCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: KIQINKAGAREDRAGQANRNPTC*LPASFL
Trigger: AAGAAAGGATGCAGGCAGCCAGCAGGTTGGGTTTCT...GTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACACTCCTGTCTGTGCCTTaGGGAGGCCTTTCTGACAAG +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTLLSVP*GGLSDK
Trigger: CTTGTCAGAAAGGCCTCCCCAAGGCACAGACAGGAG...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTAGTCCTTTGGGGGCTTaGCTAGATGCTTCCCATCAA +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTSPLGA*LDASHQ
Trigger: TTGATGGGAAGCATCTAGCCAAGCCCCCAAAGGACT...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCTCCTCCCAGATCAGGTaGCCTGCGGATGGCGACAGT +
Preference number: 4 (lower is better)
Translates to: GFVNSSLLGFPSTAQRLPSSQIR*PADGDS
Trigger: ACTGTCGCCATCCGCAGGCCACCTGATCTGGGAGGA...GGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp AAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACAGGACTGCTTTTCTTaGAGGTGGTCCTCCCAGATC +
Preference number: 4 (lower is better)
Translates to: KNTDKQSWSQGGPGGTSQQDCFS*RWSSQI
Trigger: GATCTGGGAGGACCACCTCCAAGAAAAGCAGTCCTG...TTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAGCCTGTCCTGGTGAATaGCCTGTCAAAGATGGGTGC +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTACPGE*PVKDGC
Trigger: GCACCCATCTTTGACAGGCCATTCACCAGGACAGGC...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTACCTCCAGCACCACGTTaGTCACCAGGGCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLPPAPR*SPGPPG
Trigger: ACCTGGTGGCCCTGGTGACCAACGTGGTGCTGGAGG...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTATTCATCTCCGGCACCTaGGCCGGTGTGCTGCGCTCA +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLFISGT*AGVLRS
Trigger: TGAGCGCAGCACACCGGCCCAGGTGCCGGAGATGAA...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCATCCCACATCACACCTTaGACTGCTGGGGCTCATTCA +
Preference number: 4 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSSHITP*TAGAHS
Trigger: TGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGA...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTCACAGTCCAACACCATaGGGAAACAGGGCTACTATG +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTHSPTP*GNRATM
Trigger: CATAGTAGCCCTGTTTCCCCATGGTGTTGGACTGTG...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATACACCTATGTGGGTGTaGGCCTCGAGGCCTGCGAGT +
Preference number: 4 (lower is better)
Translates to: FKFAGLSIYCTKTSRAANTPMWV*ASRPAS
Trigger: ACTCGCAGGCCTCGAGGCCCACACCCACATAGGTGT...ATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466639.5
CDS-3UTR TCA 90 bp AATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAAGAGCCCTCATCTTCTaGGGCAGACGACGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: NSSLLGFPSTAQRLPELQRALIF*GRRRVW
Trigger: CCAGACACGTCGTCTGCCTCAGAAGATGAGGGCTCT...TTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp TGTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACGGAGCGGAGTGGAGGTaGGTCGCCCGGGTCGCCGTA +
Preference number: 4 (lower is better)
Translates to: CTTIFRLCEFKFAGLSIYGAEWR*VARVAV
Trigger: TACGGCGACCCGGGCGACTCACCTCCACTCCGCTCC...GTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACGAGGTGGACGAGCCCTaGATGACCCGGTCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SRLILEKPGCFCEACMIHEVDEP*MTRSSQ
Trigger: CTGGCTCGACCGGGTCATTCAGGGCTCGTCCACCTC...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTAGGAGGATGCAGAGGATaGGGTGGACGAGCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLGGCRG*GGRALN
Trigger: ATTCAGGGCTCGTCCACCTCATCCTCTGCATCCTCC...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAATGCGTGGGACACTGTaGCCCCCACCGTACTGCCTT +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLMRGTL*PPPYCL
Trigger: AAGGCAGTACGGTGGGGGTCACAGTGTCCCACGCAT...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCAATCAGCATGCGCAGTaGGCTGAGGCTGACGTCCCT +
Preference number: 4 (lower is better)
Translates to: FPSTAQRLPELQMKESTPNQHAQ*AEADVP
Trigger: AGGGACGTCAGCCTCAGCTCACTGCGCATGCTGATT...GGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp AAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCAGTTGCACTGGAACTaGCGCATATTTCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: KIQINKAGAREDRAGQANQLHWN*RIFLPL
Trigger: AAGTGGGAGAAATATGCGTCAGTTCCAGTGCAACTG...GTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTAGTGCTCCTCCTGTGGTaGCCGGAACTGCCTCAAACA +
Preference number: 4 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLVLLLW*PELPQT
Trigger: TGTTTGAGGCAGTTCCGGTCACCACAGGAGGAGCAC...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACGGTTGTCAGGCCCGATaGAGCCCAGCAGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SRLILEKPGCFCEACMIHGCQAR*SPAGLS
Trigger: GGACAGGCCTGCTGGGCTTCATCGGGCCTGACAACC...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTGGTTGTCAGGCCCGATaGAGCCCAGCAGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: FRLCEFKFAGLSIYCTKTGCQAR*SPAGLS
Trigger: GGACAGGCCTGCTGGGCTTCATCGGGCCTGACAACC...AGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACCAGTTTGCCCACGATaGAGACCAGGTTGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLPVCPR*RPGCQA
Trigger: GGCCTGACAACCTGGTCTTCATCGTGGGCAAACTGG...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGTCTGCGAACTCCAGTaGCCATCAGCCCGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: FKFAGLSIYCTKTSRAANVCELQ*PSARPV
Trigger: AACTGGACGGGCTGATGGTCACTGGAGTTCGCAGAC...ATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTTTGGTAACACAGGTGTaGGGGCACATCAGCACATTA +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLLVTQV*GHISTL
Trigger: TAATGTGCTGATGTGCCCTCACACCTGTGTTACCAA...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTGTTCCCCACGATCATTaGGGCTGGTCCAACCTCTGG +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATVPHDH*GWSNLW
Trigger: CCAGAGGTTGGACCAGCCTCAATGATCGTGGGGAAC...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTATCTCTCCCGGAAGCCTaGGCGATTCTCTTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLSLPEA*AILFPA
Trigger: TGCTGGGAAGAGAATCGCTCAGGCTTCCGGGAGAGA...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTACATAGAACGCGGCAATaGGGTCCACCCCTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLHRTRQ*GPPLVG
Trigger: ACCCACCAGGGGTGGACCTCATTGCCGCGTTCTATG...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGCGGGGGCCGCACGGTaGCAGGCACGCAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYAGAAR*QARSHS
Trigger: ACTGTGGCTGCGTGCCTGTCACCGTGCGGCCCCCGC...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACCTCCACTGGCATCAGTaGGCTCTGTTCGCCGAAGGA +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHLHWHQ*ALFAEG
Trigger: TCCTTCGGCGAACAGAGCTCACTGATGCCAGTGGAG...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAGATGCGGGGATTGTTaGGAGGGATCTGTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHRCGDC*EGSVRA
Trigger: TGCTCTTACAGATCCCTCTCAACAATCCCCGCATCT...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACCCTGTGAAACAGAAGTaGGGCAGCTGGTTTGTACTC +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHPVKQK*GSWFVL
Trigger: GAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGG...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTTGGAGTGCAGTAGCGTaGTCTCGGCTCACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATWSAVA*SRLTAS
Trigger: GCTTGCAGTGAGCCGAGATCACGCTACTGCACTCCA...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACGGCCGAGACTTCTGCTaGTTGGGTGCAGCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: SRLILEKPGCFCEACMIHGRDFC*LGAAAV
Trigger: CACGGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCC...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTGGCCCCCGGCGTGGCTaGAGCACTGGGAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTGPRRG*STGSSG
Trigger: ACCACTGCTCCCAGTGCTGCAGCCACGCCGGGGGCC...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTTTTTGGAGGACACTCTaGTGTTCACAGGGACACCAT +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLFWRTL*CSQGHH
Trigger: ATGGTGTCCCTGTGAACAGCAGAGTGTCCTCCAAAA...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACTTTTGGAGGACACTCTaGTGTTCACAGGGACACCAT +
Preference number: 4 (lower is better)
Translates to: KIQINKAGAREDRAGQANFWRTL*CSQGHH
Trigger: ATGGTGTCCCTGTGAACAGCAGAGTGTCCTCCAAAA...GTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGCGGTCGGGGGACACCTaGAGTGAGAGGCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMRSGDT*SERLPS
Trigger: AGAGGGGAGCCTCTCACTGCAGGTGTCCCCCGACCG...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCATTTGGGCTGTGTTGTaGCCCAGCGCTGCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: FPSTAQRLPELQMKESTPIWAVL*PSAARW
Trigger: CCACCTTGCAGCGCTGGGGCACAACACAGCCCAAAT...GGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTATTTGGGCTGTGTTGTaGCCCAGCGCTGCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATIWAVL*PSAARW
Trigger: CCACCTTGCAGCGCTGGGGCACAACACAGCCCAAAT...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACGAGACACCCATAAAATaGAACCATGAACATCACAGG +
Preference number: 4 (lower is better)
Translates to: IQINKAGAREDRAGQANHETPIK*NHEHHR
Trigger: CCTGTGATGTTCATGGTTGCATTTTATGGGTGTCTC...GTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp TTTGCAATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGAGCAGAAACCCAACCTaGTGGCTGCCTGCATCCTTT +
Preference number: 4 (lower is better)
Translates to: FAMKNTDKQSWSQGGPGGSRNPT*WLPASF
Trigger: AAAGGATGCAGGCAGCCAGCAGGTTGGGTTTCTGCT...CCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCATTGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACCCAACCTTTGAAAGCTaGCACCTCTCCTGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHPTFES*HLSCLC
Trigger: GCACAGACAGGAGAGGTGGCAGCTTTCAAAGGTTGG...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCCGTACTGCCTTCTTTaGTGGTTTTATACTCAATGT +
Preference number: 4 (lower is better)
Translates to: KTSRAANEGIYSRRGGPQPYCLL*WFYTQC
Trigger: ACATTGAGTATAAAACCAGCAAAGAAGGCAGTACGG...CTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCCCGTACTGCCTTCTTTaGTGGTTTTATACTCAATGT +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGPYCLL*WFYTQC
Trigger: ACATTGAGTATAAAACCAGCAAAGAAGGCAGTACGG...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGCAGAGCCCGGCACTGTaGCAGCAGGGATGCGTGGGA +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMQSPAL*QQGCVG
Trigger: TCCCACGCATCCCTGCTGGCACAGTGCCGGGCTCTG...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTGCTAGGAGAGACCAGTaGATGTCTCGCGACTTCACC +
Preference number: 4 (lower is better)
Translates to: LGFPSTAQRLPELQMKESARRDQ*MSRDFT
Trigger: GGTGAAGTCGCGAGACATGCACTGGTCTCTCCTAGC...AGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp ATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCGTTCATCGACAGGACTaGTTTTCTTGGAGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: MKNTDKQSWSQGGPGGTSVHRQD*FSWRWS
Trigger: GGACCACCTCCAAGAAAAGCAGTCCTGTCGATGAAC...GCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp TTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTGGGCTCCACGGCCAGTaGGGTGGCCACAACGTCATC +
Preference number: 4 (lower is better)
Translates to: FRLCEFKFAGLSIYCTKTGLHGQ*GGHNVI
Trigger: GATGACGTTGTGGCCACCGCACTGGCCGTGGAGCCC...AGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACGGGCTCCACGGCCAGTaGGGTGGCCACAACGTCATC +
Preference number: 4 (lower is better)
Translates to: SRLILEKPGCFCEACMIHGLHGQ*GGHNVI
Trigger: GATGACGTTGTGGCCACCGCACTGGCCGTGGAGCCC...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAAGCACATTACACGGGTaGAGCGTCCCTTCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTSTLHG*SVPSRK
Trigger: CTTTCTGGAAGGGACGCTGCACCCGTGTAATGTGCT...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACCAGCTGGACACAGGTTaGAGTGCTTGTGACGGTGCC +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHQLDTG*SACDGA
Trigger: GGCACCGTCACAAGCACTGCAACCTGTGTCCAGCTG...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACGCTGAAGTCCAAGTATaGGAGGACATCGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHAEVQV*EDIGGG
Trigger: CCCTCCCCCGATGTCCTCGCATACTTGGACTTCAGC...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTGCTGAAGTCCAAGTATaGGAGGACATCGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATAEVQV*EDIGGG
Trigger: CCCTCCCCCGATGTCCTCGCATACTTGGACTTCAGC...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCTGCACCCGAACGTGGTaGTTACGGCGCGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVCTRTW*LRRGPA
Trigger: TGCCGGCCCGCGCCGTAAGCACCACGTTCGGGTGCA...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACTTTGGTCTCGGTGTGTaGGATGATGACCTTCACGCC +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHFGLGV*DDDLHA
Trigger: GGCGTGAAGGTCATCATCGCACACACCGAGACCAAA...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACATTTGGTCTCGGTGTGTaGGATGATGACCTTCACGCC +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTFGLGV*DDDLHA
Trigger: GGCGTGAAGGTCATCATCGCACACACCGAGACCAAA...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGTGTGATTCCTCACAATaGCCATGCCAGGCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQCDSSQ*PCQAFP
Trigger: AGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACA...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGAGGATGGGTCCAGCTTaGTTCCTTTTTCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQRMGPA*FLFPSA
Trigger: GGCTGATGGAAAAAGGAAGCAAGCTGGACCCATCCT...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCTATGTTACATACGAATaGTGCTGTTTACTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGYVTYE*CCLLRG
Trigger: ACCTCTGAGTAAACAGCAGCATTCGTATGTAACATA...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417564.3
CDS-3UTR CCA 90 bp GTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGAACCGGACCGGGCCTaGCGGCGGCAGCGCAAACCT +
Preference number: 4 (lower is better)
Translates to: VQQFLGFVNSSLLGFPSTEPDRA*RRQRKP
Trigger: AGGTTTGCGCTGCCGCCGCCAGGCCCGGTCCGGTTC...AGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp TGTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACGAACCGGACCGGGCCTaGCGGCGGCAGCGCAAACCT +
Preference number: 4 (lower is better)
Translates to: CTTIFRLCEFKFAGLSIYEPDRA*RRQRKP
Trigger: AGGTTTGCGCTGCCGCCGCCAGGCCCGGTCCGGTTC...GTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp TGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGGCAGACGACGTGTCTaGAGGGGTGTAGGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: CEFKFAGLSIYCTKTSRAGRRRV*RGVGFH
Trigger: GTGGAAACCTACACCCCTCCAGACACGTCGTCTGCC...AGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp TTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCAGACGACGTGTCTaGAGGGGTGTAGGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: FPSTAQRLPELQMKESTPGRRRV*RGVGFH
Trigger: GTGGAAACCTACACCCCTCCAGACACGTCGTCTGCC...GGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp AAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAACGCTGGAATGGCTCTaGAGCGGAGTGGAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: KFAGLSIYCTKTSRAANETLEWL*SGVEVS
Trigger: ACTCACCTCCACTCCGCTCCAGAGCCATTCCAGCGT...TTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTAACGCTGGAATGGCTCTaGAGCGGAGTGGAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLTLEWL*SGVEVS
Trigger: ACTCACCTCCACTCCGCTCCAGAGCCATTCCAGCGT...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACGCCAGGGCTCGACGCTaGAATGGCTCTGGAGCGGAG +
Preference number: 4 (lower is better)
Translates to: SRLILEKPGCFCEACMIHARARR*NGSGAE
Trigger: CTCCGCTCCAGAGCCATTCCAGCGTCGAGCCCTGGC...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCAGATCTATGTGGGTGTaGGCCTCGAGGCCTGCGAGT +
Preference number: 4 (lower is better)
Translates to: FPSTAQRLPELQMKESTPRSMWV*ASRPAS
Trigger: ACTCGCAGGCCTCGAGGCCCACACCCACATAGATCT...GGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435722.7
CDS-3UTR CCA 90 bp CTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTGAATGCAGATCTATGTaGGTGTGGGCCTCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LGFPSTAQRLPELQMKESECRSM*VWASRP
Trigger: AGGCCTCGAGGCCCACACCCACATAGATCTGCATTC...AGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435722.7
CDS-3UTR CCA 90 bp GCAATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAAAGAACTCCTTCAGTaGAGGGCGCTTTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: AMKNTDKQSWSQGGPGGTKELLQ*RALWPL
Trigger: AAGAGGCCAAAGCGCCCTCCACTGAAGGAGTTCTTT...TGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCATTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp TGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTTCAGACAGGGGGATTTaGGCTGTGTTGTGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: CEFKFAGLSIYCTKTSRASDRGI*AVLCPS
Trigger: GCTGGGGCACAACACAGCCCAAATCCCCCTGTCTGA...AGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp AAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACTTAATGGCACTTCTATaGGGACAGGAACCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: KIQINKAGAREDRAGQANLMALL*GQEPAL
Trigger: CAGAGCTGGTTCCTGTCCCCATAGAAGTGCCATTAA...GTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTTTAATGGCACTTCTATaGGGACAGGAACCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTLMALL*GQEPAL
Trigger: CAGAGCTGGTTCCTGTCCCCATAGAAGTGCCATTAA...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTCTCCTGTCTGTGCCTTaGGGAGGCCTTTCTGACAAG +
Preference number: 4 (lower is better)
Translates to: LGFPSTAQRLPELQMKESLLSVP*GGLSDK
Trigger: CTTGTCAGAAAGGCCTCCCCAAGGCACAGACAGGAG...AGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGGAGTACCCGCACGCCTaGGTCAGAGCCCGGCACTGT +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMEYPHA*VRARHC
Trigger: ACAGTGCCGGGCTCTGACCCAGGCGTGCGGGTACTC...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTAGGACAGATGACCTCTaGCCTCAGACCTCTGGACTG +
Preference number: 4 (lower is better)
Translates to: LGFPSTAQRLPELQMKESRTDDL*PQTSGL
Trigger: CAGTCCAGAGGTCTGAGGCCAGAGGTCATCTGTCCT...AGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACGCCCTTTTGTGCAGCTaGACACAGGTTGCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHALLCS*TQVAVL
Trigger: AAGCACTGCAACCTGTGTCCAGCTGCACAAAAGGGC...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGACGCGGGCCTTGTACTaGCTGACGGCCGACAGCCAC +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMTRALY*LTADSH
Trigger: GTGGCTGTCGGCCGTCAGCCAGTACAAGGCCCGCGT...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCGGGTCAGCGCAATCCTaGGCCGCTCCTCGGCGACCA +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVGSAQS*AAPRRP
Trigger: TGGTCGCCGAGGAGCGGCCCAGGATTGCGCTGACCC...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTCCCTGCACCCGAACGTaGTGCTTACGGCGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTPCTRT*CLRRGP
Trigger: CGGCCCGCGCCGTAAGCACCACGTTCGGGTGCAGGG...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTATACCCGGTGGCATTGTaGGGGCTGCTTACCCAGATC +
Preference number: 4 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLYPVAL*GLLTQI
Trigger: GATCTGGGTAAGCAGCCCCCACAATGCCACCGGGTA...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTCGGTGTAGTACCCGGTaGCATTGTGGGGGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATRCSTR*HCGGCL
Trigger: TAAGCAGCCCCCACAATGCCACCGGGTACTACACCG...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACGATAGGGATCACCCCTaGGTCCACGATGACCACCAC +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHDRDHP*VHDDHH
Trigger: GTGGTGGTCATCGTGGACCCAGGGGTGATCCCTATC...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACTGTGAGCAGGGAGGATaGGTCCAGCTTGCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHCEQGG*VQLASF
Trigger: AAAGGAAGCAAGCTGGACCCATCCTCCCTGCTCACA...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCCATATCCTTTTTGAGTaGTGTCACCTTCCGACAGCT +
Preference number: 4 (lower is better)
Translates to: ASTPLSIKELAEEALCVTHILFE*CHLPTA
Trigger: AGCTGTCGGAAGGTGACATCACTCAAAAAGGATATG...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTAGCGGCCGTGGTTTGTaGGGGCCCAGGAATTCTATT +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATSGRGL*GPRNSI
Trigger: AATAGAATTCCTGGGCCCTCACAAACCACGGCCGCT...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTTTCAGTGTGGACATCTaGCCGGAAGCGCTCATCCCT +
Preference number: 4 (lower is better)
Translates to: CEFKFAGLSIYCTKTSRAFSVDI*PEALIP
Trigger: AGGGATGAGCGCTTCCGGTCAGATGTCCACACTGAA...AGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp CAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAATGGACGAGCCCTGAATaGCCCGGTCGAGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QFLGFVNSSLLGFPSTAQWTSPE*PGRARA
Trigger: AGCCCTGGCTCGACCGGGTCATTCAGGGCTCGTCCA...TTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGGAGGTGGACGAGCCCTaGATGACCCGGTCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWEVDEP*MTRSSQ
Trigger: CTGGCTCGACCGGGTCATTCAGGGCTCGTCCACCTC...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGAGGGGGACACCTGCAGTaGGAGGCTCCCCTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: FLGFVNSSLLGFPSTAQRGGHLQ*EAPLSA
Trigger: TGCTGAGAGGGGAGCCTCTCACTGCAGGTGTCCCCC...TCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTAAAGTTTACCATAGGTaGGAGTGTAGACGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTKVYHR*ECRRLS
Trigger: GGAAAGCCGTCTACACTCTCACCTATGGTAAACTTT...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGGCGGGGGCCAACCTTTaGAAGCTGCCACCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMAGANL*KLPPLL
Trigger: CAGGAGAGGTGGCAGCTTTCAAAGGTTGGCCCCCGC...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTGCGCGTAGGGGACGCTaGCCACGTGCATCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: FRLCEFKFAGLSIYCTKTARRGR*PRASCS
Trigger: TGAACAGGATGCACGTGGTCAGCGTCCCCTACGCGC...AGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp ATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACCAAACACATTCTTCGTaGTTCCAAGCAATCCATAGT +
Preference number: 4 (lower is better)
Translates to: IQINKAGAREDRAGQANHQTHSS*FQAIHS
Trigger: ACTATGGATTGCTTGGAATCACGAAGAATGTGTTTG...GTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGCAGGCCTGTCCTGGTaGATGGCCTGTCAAAGATGG +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLAGLSW*MACQRW
Trigger: CCATCTTTGACAGGCCATTCACCAGGACAGGCCTGC...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGAGGTTGTCAGGCCCGATaGAGCCCAGCAGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: FLGFVNSSLLGFPSTAQRGCQAR*SPAGLS
Trigger: GGACAGGCCTGCTGGGCTTCATCGGGCCTGACAACC...TCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACGATCTCTCCCAGGTGTaGGTCTCCCAAGGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHDLSQV*VSQGSF
Trigger: AAAGGACCCTTGGGAGACTCACACCTGGGAGAGATC...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCCCCCTGGGTCCACGATaGCCACCACTCCCACGACCA +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVPLGPR*PPLPRP
Trigger: TGGTCGTGGGAGTGGTGGTCATCGTGGACCCAGGGG...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACCCATCAGCCTCCCTGTaGAACAGAAGTGAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHPSASL*NRSEAA
Trigger: AGCTGCCTCACTTCTGTTTCACAGGGAGGCTGATGG...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATTTCCCGAGCTGCAAATaGAGGAATCTACTCCCGGCG +
Preference number: 4 (lower is better)
Translates to: FKFAGLSIYCTKTSRAANFPSCK*RNLLPA
Trigger: CGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAA...ATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCGTGGGCCGAGACTTCTaGTGCTTGGGTGCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVVGRDF*CLGAAA
Trigger: GGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCCCAC...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCATTGGCCAAAGCTGCTTaGACGGCTTCAGTGTGGACA +
Preference number: 4 (lower is better)
Translates to: EFKFAGLSIYCTKTSRAALAKAA*TASVWT
Trigger: TGTCCACACTGAAGCCGTGCAAGCAGCTTTGGCCAA...TGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACGTATTTGGCCAAAGCTaGTTGCACGGCTTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHVFGQS*LHGFSV
Trigger: CACACTGAAGCCGTGCAAGCAGCTTTGGCCAAATAC...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAAGTTTCCACAGACGAATaGACAAGGACAGAACGTCTC +
Preference number: 4 (lower is better)
Translates to: KNTDKQSWSQGGPGGTSQVSTDE*TRTERL
Trigger: GAGACGTTCTGTCCTTGTGCATTCGTCTGTGGAAAC...TTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp TGTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACGTGGGCCTCGAGGCCTaGGAGTGCAGTGGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: CTTIFRLCEFKFAGLSIYVGLEA*ECSGSG
Trigger: GCCGCTACCACTGCACTCGCAGGCCTCGAGGCCCAC...GTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp TTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCCACAGGGACACCATCTaGTGTTTCCAGCATGCTCCC +
Preference number: 4 (lower is better)
Translates to: FPSTAQRLPELQMKESTPHRDTI*CFQHAP
Trigger: GGGAGCATGCTGGAAACAGCAGATGGTGTCCCTGTG...GGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435722.7
CDS-3UTR GCA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACACAGGGACACCATCTaGTGTTTCCAGCATGCTCCC +
Preference number: 4 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLHRDTI*CFQHAP
Trigger: GGGAGCATGCTGGAAACAGCAGATGGTGTCCCTGTG...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCCGGTCGGGGGACACCTaGAGTGAGAGGCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVRSGDT*SERLPS
Trigger: AGAGGGGAGCCTCTCACTGCAGGTGTCCCCCGACCG...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTGTTGTGCCCCAGCGCTaGAAGGTGGCCAACAGCGAC +
Preference number: 4 (lower is better)
Translates to: FRLCEFKFAGLSIYCTKTVVPQR*KVANSD
Trigger: GTCGCTGTTGGCCACCTTGCAGCGCTGGGGCACAAC...AGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACACCCAACCTGCTGGCTaGCTGCATCCTTTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHTQPAG*LHPFLL
Trigger: TAACAAGAAAGGATGCAGGCAGCCAGCAGGTTGGGT...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCACCAACCTTTGAAAGCTaGCACCTCTCCTGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: EFKFAGLSIYCTKTSRAAPTFES*HLSCLC
Trigger: GCACAGACAGGAGAGGTGGCAGCTTTCAAAGGTTGG...TGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGCTGTGCCAGCAGGGATaGGTGGGACACTGTGACCCC +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMLCQQG*VGHCDP
Trigger: GGGGTCACAGTGTCCCACGCATCCCTGCTGGCACAG...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACGCTAGGAGAGACCAGTaGATGTCTCGCGACTTCACC +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHARRDQ*MSRDFT
Trigger: GGTGAAGTCGCGAGACATGCACTGGTCTCTCCTAGC...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTCCAGATCAGGTGGCCTaGGGATGGCGACAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: FRLCEFKFAGLSIYCTKTPDQVA*GWRQSA
Trigger: CGCTGACTGTCGCCATCCGCAGGCCACCTGATCTGG...AGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGCCAGATCAGGTGGCCTaGGGATGGCGACAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMPDQVA*GWRQSA
Trigger: CGCTGACTGTCGCCATCCGCAGGCCACCTGATCTGG...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTAGAACACAGCGATCCTaGCTCTGTAGACAAACTTCA +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASRTQRS*LCRQTS
Trigger: TGAAGTTTGTCTACAGAGGCAGGATCGCTGTGTTCT...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACGACCACCATGCACGTaGGCACACATGACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLRPPCT*AHMTGS
Trigger: TGAACCTGTCATGTGTGCGCACGTGCATGGTGGTCG...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACACATACAGTGCATCGTaGCGCCCTCCACTGGCATCA +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHTYSAS*RPPLAS
Trigger: TGATGCCAGTGGAGGGCGGCACGATGCACTGTATGT...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTCCCAACCACATACAGTaGATCGTGCCGCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: AQLARLMCGELITALLGTPNHIQ*IVPPST
Trigger: AGTGGAGGGCGGCACGATGCACTGTATGTGGTTGGG...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACAGCGATGCTCCTGTGTaGTCGGATGACAGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHSDAPV*SDDRGL
Trigger: GAGACCTCTGTCATCCGAGCACACAGGAGCATCGCT...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAATGATTCACAAAATTTaGCACCCTCAATACCCCAAA +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAMIHKI*HPQYPK
Trigger: TTTGGGGTATTGAGGGTGGCAAATTTTGTGAATCAT...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGTGGGTGCAGCGGCCGTaGTTTGTGAGGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMWVQRP*FVRAQE
Trigger: TTCCTGGGCCCTCACAAACCACGGCCGCTGCACCCA...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTTGCACGGCTTCAGTGTaGACATCTGACCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: AQLARLMCGELITALLGTCTASV*TSDRKR
Trigger: GCGCTTCCGGTCAGATGTCCACACTGAAGCCGTGCA...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTGGCAGACGACGTGTCTaGAGGGGTGTAGGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: AQLARLMCGELITALLGTGRRRV*RGVGFH
Trigger: GTGGAAACCTACACCCCTCCAGACACGTCGTCTGCC...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAGCCAGGGCTCGACGCTaGAATGGCTCTGGAGCGGAG +
Preference number: 4 (lower is better)
Translates to: QFLGFVNSSLLGFPSTAQARARR*NGSGAE
Trigger: CTCCGCTCCAGAGCCATTCCAGCGTCGAGCCCTGGC...TTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp ACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAGCGTGGCTGCAGCACTaGGAGCAGTGGTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: TIFRLCEFKFAGLSIYCTAWLQH*EQWWVS
Trigger: GGAGACCCACCACTGCTCCCAGTGCTGCAGCCACGC...TGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCATTAATGGCACTTCTATaGGGACAGGAACCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSLMALL*GQEPAL
Trigger: CAGAGCTGGTTCCTGTCCCCATAGAAGTGCCATTAA...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACAGAAACCCAACCTGCTaGCTGCCTGCATCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHRNPTC*LPASFL
Trigger: AAGAAAGGATGCAGGCAGCCAGCAGGTTGGGTTTCT...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACCTCCTGTCTGTGCCTTaGGGAGGCCTTTCTGACAAG +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHLLSVP*GGLSDK
Trigger: CTTGTCAGAAAGGCCTCCCCAAGGCACAGACAGGAG...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCCTCCTGTCTGTGCCTTaGGGAGGCCTTTCTGACAAG +
Preference number: 4 (lower is better)
Translates to: FPSTAQRLPELQMKESTPLLSVP*GGLSDK
Trigger: CTTGTCAGAAAGGCCTCCCCAAGGCACAGACAGGAG...GGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp TTTGCAATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGAGTCCTTTGGGGGCTTaGCTAGATGCTTCCCATCAA +
Preference number: 4 (lower is better)
Translates to: FAMKNTDKQSWSQGGPGGSPLGA*LDASHQ
Trigger: TTGATGGGAAGCATCTAGCCAAGCCCCCAAAGGACT...CCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCATTGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGCCAGTCCCTGTGTCCTaGGCCAGAGGGTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWPVPVS*ARGCQS
Trigger: GGACTGGCACCCTCTGGCCCAGGACACAGGGACTGG...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCATACTGCCTTCTTTGCTaGTTTTATACTCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAYCLLC*FYTQCR
Trigger: CCTACATTGAGTATAAAACCAGCAAAGAAGGCAGTA...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGAGAGTACCCGCACGCCTaGGTCAGAGCCCGGCACTGT +
Preference number: 4 (lower is better)
Translates to: FLGFVNSSLLGFPSTAQREYPHA*VRARHC
Trigger: ACAGTGCCGGGCTCTGACCCAGGCGTGCGGGTACTC...TCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp AAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAACTCAGACCTCTGGACTaGAAGACGTTGAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: KFAGLSIYCTKTSRAANELRPLD*KTLRKA
Trigger: CGCCTTCCTCAACGTCTTCCAGTCCAGAGGTCTGAG...TTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACAGGACAGATGACCTCTaGCCTCAGACCTCTGGACTG +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHRTDDL*PQTSGL
Trigger: CAGTCCAGAGGTCTGAGGCCAGAGGTCATCTGTCCT...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAACAGGTGGCCTGCGGATaGCGACAGTCAGCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: QFLGFVNSSLLGFPSTAQQVACG*RQSAPQ
Trigger: CTGAGGCGCTGACTGTCGCCATCCGCAGGCCACCTG...TTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp CTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTTGCTTTTCTTGGAGGTaGTCCTCCCAGATCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LGFPSTAQRLPELQMKESCFSWR*SSQIRW
Trigger: CCACCTGATCTGGGAGGACCACCTCCAAGAAAAGCA...AGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTGCCTGTCCTGGTGAATaGCCTGTCAAAGATGGGTGC +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATACPGE*PVKDGC
Trigger: GCACCCATCTTTGACAGGCCATTCACCAGGACAGGC...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTCAGTACACGCCCACCTaGTGGATGCTATCAATGGCC +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATQYTPT*WMLSMA
Trigger: GGCCATTGATAGCATCCACCAGGTGGGCGTGTACTG...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAGGCTGGTCCAACCTCTaGTTGTTTCTGACGAGGTTT +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTGWSNL*LFLTRF
Trigger: AAACCTCGTCAGAAACAACCAGAGGTTGGACCAGCC...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTAATGAGGTCCACCCCTaGTGGGTAGACCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: AQLARLMCGELITALLGTNEVHP*WVDQSH
Trigger: GTGGCTCTGGTCTACCCACCAGGGGTGGACCTCATT...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAAAACGAACCCTGTCATaGCGCAGTGCCCGCATGTCC +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLKRTLS*RSARMS
Trigger: GGACATGCGGGCACTGCGCCATGACAGGGTTCGTTT...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTACGGTGTAGTACCCGGTaGCATTGTGGGGGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLRCSTR*HCGGCL
Trigger: TAAGCAGCCCCCACAATGCCACCGGGTACTACACCG...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTTGTAGGCGACATAGATaGGGTCCAGCTGGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATCRRHR*GPAGQP
Trigger: TGGCTGACCAGCTGGACCCCATCTATGTCGCCTACA...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTACACACCTTGGACTGCTaGGGCTCATTCATCTCCGGC +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLHTLDC*GSFISG
Trigger: GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTG...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCGTTTCTCCCCGTAAATaGTCTCAAGTTTCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: ASTPLSIKELAEEALCVTVSPRK*SQVSPV
Trigger: TACGGGAGAAACTTGAGACCATTTACGGGGAGAAAC...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACAAGCTCCGCCTCCCTaGTTCATACCATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLQAPPP*FIPFSC
Trigger: GCAGGAGAATGGTATGAACCAGGGAGGCGGAGCTTG...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAGCTTCCCTCAGGCTTTaGCTGATTTGGATCTGGTTG +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTASLRL*LIWIWL
Trigger: CAACCAGATCCAAATCAGCCAAAGCCTGAGGGAAGC...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTAGCGGCCGTGGTTTGTaGGGGCCCAGGAATTCTATT +
Preference number: 4 (lower is better)
Translates to: AQLARLMCGELITALLGTSGRGL*GPRNSI
Trigger: AATAGAATTCCTGGGCCCTCACAAACCACGGCCGCT...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAAGCGGCCGTGGTTTGTaGGGGCCCAGGAATTCTATT +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLSGRGL*GPRNSI
Trigger: AATAGAATTCCTGGGCCCTCACAAACCACGGCCGCT...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACCACGAGGCCCGTGGTaGCATCAGGAGGGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: FLGFVNSSLLGFPSTAQRPRGPW*HQEGQN
Trigger: ATTCTGCCCCTCCTGATGTCACCACGGGCCTCGTGG...TCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435722.7
CDS-3UTR TCA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCAAAAGTTTACCATAGGTaGGAGTGTAGACGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSKVYHR*ECRRLS
Trigger: GGAAAGCCGTCTACACTCTCACCTATGGTAAACTTT...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCGCGGGGGCCAACCTTTaGAAGCTGCCACCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVAGANL*KLPPLL
Trigger: CAGGAGAGGTGGCAGCTTTCAAAGGTTGGCCCCCGC...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACTTGGTAACACAGGTGTaGGGGCACATCAGCACATTA +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHLVTQV*GHISTL
Trigger: TAATGTGCTGATGTGCCCTCACACCTGTGTTACCAA...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGTCACCCCCTTCATCCTaGGGACACCCGTCTGTGCGC +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWSPPSS*GHPSVR
Trigger: GCGCACAGACGGGTGTCCTCAGGATGAAGGGGGTGA...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGAACTCAGCCGGGCACTaGAGTGGTCGGCATGAAGCG +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMNSAGH*SGRHEA
Trigger: CGCTTCATGCCGACCACTTCAGTGCCCGGCTGAGTT...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTTCCTGTGTGCTCGGATaGCAGAGGTCTCAATGTCGA +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATSCVLG*QRSQCR
Trigger: TCGACATTGAGACCTCTGTCATCCGAGCACACAGGA...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGAAGGGCGAGTCCCGGTaGGTGAGCTCTGCGGTGTCT +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWKGESR*VSSAVS
Trigger: AGACACCGCAGAGCTCACTCACCGGGACTCGCCCTT...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTCAACCTCGGTGCCTGTaGTTCCTCACAATGCCCATG +
Preference number: 4 (lower is better)
Translates to: AQLARLMCGELITALLGTQPRCL*FLTMPM
Trigger: CATGGGCATTGTGAGGAATCACAGGCACCGAGGTTG...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTTCTGTGAAGCATGCATaGTTCACAAAATTTGCCACC +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTSVKHA*FTKFAT
Trigger: GGTGGCAAATTTTGTGAATCATGCATGCTTCACAGA...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTAGACAGGAGTAAAACATaGGAGCTGGCCCAGTTAGCC +
Preference number: 4 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLDRSKT*ELAQLA
Trigger: GGCTAACTGGGCCAGCTCTCATGTTTTACTCCTGTC...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTGACAGGAGTAAAACATaGGAGCTGGCCCAGTTAGCC +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATDRSKT*ELAQLA
Trigger: GGCTAACTGGGCCAGCTCTCATGTTTTACTCCTGTC...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGTTTGGATCTGGTTGCTaGACTTCCAACAATTCCTCA +
Preference number: 4 (lower is better)
Translates to: YCTKTSRAANEGIYSRRGFGSGC*TSNNSS
Trigger: TGAGGAATTGTTGGAAGTTCAGCAACCAGATCCAAA...CCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAGTTTCCACAGACGAATaGACAAGGACAGAACGTCTC +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTVSTDE*TRTERL
Trigger: GAGACGTTCTGTCCTTGTGCATTCGTCTGTGGAAAC...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTCAGGAGGGGCAGAATaGAGATCTATGTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHSGGAE*RSMWVW
Trigger: CCACACCCACATAGATCTGCATTCTGCCCCTCCTGA...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGCCAGCATGCTCCCGCTaGACCCCCGAGGAACACTTC +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWPACSR*TPEEHF
Trigger: GAAGTGTTCCTCGGGGGTGCAGCGGGAGCATGCTGG...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAACTGCTGTTTCCAGCATaGTCCCGCTGCACCCCCGAG +
Preference number: 4 (lower is better)
Translates to: QFLGFVNSSLLGFPSTAQLLFPA*SRCTPE
Trigger: CTCGGGGGTGCAGCGGGAGCATGCTGGAAACAGCAG...TTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435722.7
CDS-3UTR GCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACATTTTGGAGGACACTCTaGTGTTCACAGGGACACCAT +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTFWRTL*CSQGHH
Trigger: ATGGTGTCCCTGTGAACAGCAGAGTGTCCTCCAAAA...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGGTTGTGCCCCAGCGCTaGAAGGTGGCCAACAGCGAC +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWVVPQR*KVANSD
Trigger: GTCGCTGTTGGCCACCTTGCAGCGCTGGGGCACAAC...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCGTTGTGCCCCAGCGCTaGAAGGTGGCCAACAGCGAC +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVVVPQR*KVANSD
Trigger: GTCGCTGTTGGCCACCTTGCAGCGCTGGGGCACAAC...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACCCAACCTGCTGGCTaGCTGCATCCTTTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: LGFPSTAQRLPELQMKESTQPAG*LHPFLL
Trigger: TAACAAGAAAGGATGCAGGCAGCCAGCAGGTTGGGT...AGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp TTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATAGCAGAAACCCAACCTaGTGGCTGCCTGCATCCTTT +
Preference number: 4 (lower is better)
Translates to: FKFAGLSIYCTKTSRAANSRNPT*WLPASF
Trigger: AAAGGATGCAGGCAGCCAGCAGGTTGGGTTTCTGCT...ATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp AAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAAGAAGACTCCACAGCTaGCCAGCAGAAACCCAACCT +
Preference number: 4 (lower is better)
Translates to: KFAGLSIYCTKTSRAANERRLHS*PAETQP
Trigger: AGGTTGGGTTTCTGCTGGGCAGCTGTGGAGTCTTCT...TTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACCCAACCTTTGAAAGCTaGCACCTCTCCTGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHPTFES*HLSCLC
Trigger: GCACAGACAGGAGAGGTGGCAGCTTTCAAAGGTTGG...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGGGGCTTGGCTAGATaGTTCCCATCAATCACTAGC +
Preference number: 4 (lower is better)
Translates to: FPSTAQRLPELQMKESTPGGLAR*FPSITS
Trigger: GCTAGTGATTGATGGGAAGCATCTAGCCAAGCCCCC...GGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACCAGAGCCCGGCACTGTaGCAGCAGGGATGCGTGGGA +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHQSPAL*QQGCVG
Trigger: TCCCACGCATCCCTGCTGGCACAGTGCCGGGCTCTG...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCACTTGTTAACACGCCATaGCACAGACCAGCATCCCTT +
Preference number: 4 (lower is better)
Translates to: EFKFAGLSIYCTKTSRAALVNTP*HRPASL
Trigger: AAGGGATGCTGGTCTGTGGCATGGCGTGTTAACAAG...TGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGAGAACACAGCGATCCTaGCTCTGTAGACAAACTTCA +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQRTQRS*LCRQTS
Trigger: TGAAGTTTGTCTACAGAGGCAGGATCGCTGTGTTCT...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGAGCCGTGTGACAGCCTaGGTGGTGAGGACGCATGCA +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMSRVTA*VVRTHA
Trigger: TGCATGCGTCCTCACCACGCAGGCTGTCACACGGCT...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTGTCCCGAGTAGACACTaGACAGACACCACAGGGCAA +
Preference number: 4 (lower is better)
Translates to: AQLARLMCGELITALLGTVPSRH*TDTTGQ
Trigger: TTGCCCTGTGGTGTCTGTGCAGTGTCTACTCGGGAC...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGTCCCGAGTAGACACTaGACAGACACCACAGGGCAA +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLVPSRH*TDTTGQ
Trigger: TTGCCCTGTGGTGTCTGTGCAGTGTCTACTCGGGAC...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTACGCCTAGGCCCTTGGTaGACATCTCCATCACAGAGT +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLRLGPW*TSPSQS
Trigger: ACTCTGTGATGGAGATGTGCACCAAGGGCCTAGGCG...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTCGCCTAGGCCCTTGGTaGACATCTCCATCACAGAGT +
Preference number: 4 (lower is better)
Translates to: AQLARLMCGELITALLGTRLGPW*TSPSQS
Trigger: ACTCTGTGATGGAGATGTGCACCAAGGGCCTAGGCG...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTACATACAGTGCATCGTaGCGCCCTCCACTGGCATCA +
Preference number: 4 (lower is better)
Translates to: AQLARLMCGELITALLGTTYSAS*RPPLAS
Trigger: TGATGCCAGTGGAGGGCGGCACGATGCACTGTATGT...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGAGGTCCAGGGCATCCTaGTCTAGCCCATCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMRSRAS*SSPSSS
Trigger: GGAGCTGGATGGGCTAGAGCAGGATGCCCTGGACCT...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTAGCTGGTTTGTACTCTaGTATCTTCCCAGAATCAAG +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTSWFVL*YLPRIK
Trigger: CTTGATTCTGGGAAGATAGCAGAGTACAAACCAGCT...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACCCTGACCTCGTGATCTaGTCGCCTCGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SRLILEKPGCFCEACMIHPDLVI*SPRPPK
Trigger: TTTGGGAGGCCGAGGCGAGCAGATCACGAGGTCAGG...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCTGTTTCTGTGAAGCATaGATGATTCACAAAATTTGC +
Preference number: 4 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGCFCEA*MIHKIC
Trigger: GCAAATTTTGTGAATCATGCATGCTTCACAGAAACA...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACGAAACAGGGCTACTATaGACAGTGCTATTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHETGLL*TVLFVA
Trigger: GGCTACAAATAGCACTGTGCATAGTAGCCCTGTTTC...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGATGGGTGCAGCGGCCGTaGTTTGTGAGGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: FLGFVNSSLLGFPSTAQRWVQRP*FVRAQE
Trigger: TTCCTGGGCCCTCACAAACCACGGCCGCTGCACCCA...TCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGCATCCCTCGAGGCGGTaGGCCGAGACTTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWHPSRR*AETSAA
Trigger: AGCAGCAGAAGTCTCGGCCCACCGCCTCGAGGGATG...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAGGCTCGACGCTGGAATaGCTCTGGAGCGGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: QFLGFVNSSLLGFPSTAQGSTLE*LWSGVE
Trigger: CTCCACTCCGCTCCAGAGCCATTCCAGCGTCGAGCC...TTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp CTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTAAAGAACTCCTTCAGTaGAGGGCGCTTTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: LGFPSTAQRLPELQMKESKELLQ*RALWPL
Trigger: AAGAGGCCAAAGCGCCCTCCACTGAAGGAGTTCTTT...AGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATCCCAGCGCTGCAAGGTaGCCAACAGCGACGGCGGTC +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYPSAAR*PTATAV
Trigger: GACCGCCGTCGCTGTTGGCCACCTTGCAGCGCTGGG...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAGAAACCCAACCTGCTaGCTGCCTGCATCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: EFKFAGLSIYCTKTSRAARNPTC*LPASFL
Trigger: AAGAAAGGATGCAGGCAGCCAGCAGGTTGGGTTTCT...TGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp TTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCTCTGACAAGCGTCTGTaGTCAGGGCCAAGAAGACTC +
Preference number: 4 (lower is better)
Translates to: FPSTAQRLPELQMKESTPSDKRL*SGPRRL
Trigger: GAGTCTTCTTGGCCCTGACCACAGACGCTTGTCAGA...GGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp AGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCAGATCGACCACGGGTTaGCACCATCGGCCACAATCA +
Preference number: 4 (lower is better)
Translates to: RLCEFKFAGLSIYCTKTSRSTTG*HHRPQS
Trigger: TGATTGTGGCCGATGGTGCCAACCCGTGGTCGATCT...GGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTCAGGACTGCTTTTCTTaGAGGTGGTCCTCCCAGATC +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATQDCFS*RWSSQI
Trigger: GATCTGGGAGGACCACCTCCAAGAAAAGCAGTCCTG...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCTGGTCAGGAGTGGTGTaGGCACGCCACTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVWSGVV*ARHCST
Trigger: CGTGCTGCAGTGGCGTGCCCACACCACTCCTGACCA...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGGAGGTCCACCCCTGGTaGGTAGACCAGAGCCACATG +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMEVHPW*VDQSHM
Trigger: CATGTGGCTCTGGTCTACCCACCAGGGGTGGACCTC...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTTCCAGACTCCATCAATaGCAGGCTGTGCGGAGAACC +
Preference number: 4 (lower is better)
Translates to: AQLARLMCGELITALLGTSRLHQ*QAVRRT
Trigger: GGTTCTCCGCACAGCCTGCCATTGATGGAGTCTGGA...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCCCTCCAGCACCACGTTaGTCACCAGGGCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVPPAPR*SPGPPG
Trigger: ACCTGGTGGCCCTGGTGACCAACGTGGTGCTGGAGG...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTCCCACATCACACCTTaGACTGCTGGGGCTCATTCA +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHSHITP*TAGAHS
Trigger: TGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGA...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp ATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCAGGCTTTGGCTGATTTaGATCTGGTTGCTGAACTTC +
Preference number: 4 (lower is better)
Translates to: MKNTDKQSWSQGGPGGTSRLWLI*IWLLNF
Trigger: GAAGTTCAGCAACCAGATCCAAATCAGCCAAAGCCT...GCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp TTTGCAATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGCATATCCTTTTTGAGTaGTGTCACCTTCCGACAGCT +
Preference number: 4 (lower is better)
Translates to: FAMKNTDKQSWSQGGPGGHILFE*CHLPTA
Trigger: AGCTGTCGGAAGGTGACATCACTCAAAAAGGATATG...CCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCATTGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR TCA 90 bp GTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGGTCTCCCTCCCGGGTaGGATGAGGTGGAGGATGCA +
Preference number: 4 (lower is better)
Translates to: VQQFLGFVNSSLLGFPSTGLPPG*DEVEDA
Trigger: TGCATCCTCCACCTCATCTCACCCGGGAGGGAGACC...AGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTGGTCTCCCTCCCGGGTaGGATGAGGTGGAGGATGCA +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTGLPPG*DEVEDA
Trigger: TGCATCCTCCACCTCATCTCACCCGGGAGGGAGACC...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTCCACGAGGCCCGTGGTaGCATCAGGAGGGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTPRGPW*HQEGQN
Trigger: ATTCTGCCCCTCCTGATGTCACCACGGGCCTCGTGG...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGGGGGACACCTGCAGTaGGAGGCTCCCCTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYGGHLQ*EAPLSA
Trigger: TGCTGAGAGGGGAGCCTCTCACTGCAGGTGTCCCCC...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTCATAAAATGCAACCATaGACATCACAGGGTCACTAT +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLHKMQP*TSQGHY
Trigger: ATAGTGACCCTGTGATGTTCATGGTTGCATTTTATG...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGAATGCGTGGGACACTGTaGCCCCCACCGTACTGCCTT +
Preference number: 4 (lower is better)
Translates to: FLGFVNSSLLGFPSTAQRMRGTL*PPPYCL
Trigger: AAGGCAGTACGGTGGGGGTCACAGTGTCCCACGCAT...TCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTCAAACACATTCTTCGTaGTTCCAAGCAATCCATAGT +
Preference number: 4 (lower is better)
Translates to: KEMRGLLRGICKSTGRASQTHSS*FQAIHS
Trigger: ACTATGGATTGCTTGGAATCACGAAGAATGTGTTTG...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGCCAGTTTGCCCACGATaGAGACCAGGTTGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMPVCPR*RPGCQA
Trigger: GGCCTGACAACCTGGTCTTCATCGTGGGCAAACTGG...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAACCTCTGGTTGTTTCTaGCGAGGTTTGGGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLTSGCF*RGLGRL
Trigger: CAACCTCCCCAAACCTCGTCAGAAACAACCAGAGGT...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCAACTCAGCCGGGCACTaGAGTGGTCGGCATGAAGCG +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVNSAGH*SGRHEA
Trigger: CGCTTCATGCCGACCACTTCAGTGCCCGGCTGAGTT...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGCTCCACTGGCATCAGTaGGCTCTGTTCGCCGAAGGA +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMLHWHQ*ALFAEG
Trigger: TCCTTCGGCGAACAGAGCTCACTGATGCCAGTGGAG...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCCAAAATGGCACTTATTaGGTGTCCGTGACAATACAT +
Preference number: 4 (lower is better)
Translates to: ASTPLSIKELAEEALCVTQNGTY*VSVTIH
Trigger: ATGTATTGTCACGGACACTCAATAAGTGCCATTTTG...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCATCTGTGAAGCATGCATaGTTCACAAAATTTGCCACC +
Preference number: 4 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSSVKHA*FTKFAT
Trigger: GGTGGCAAATTTTGTGAATCATGCATGCTTCACAGA...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp ATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCTTTGGATCTGGTTGCTaGACTTCCAACAATTCCTCA +
Preference number: 4 (lower is better)
Translates to: MKNTDKQSWSQGGPGGTSFGSGC*TSNNSS
Trigger: TGAGGAATTGTTGGAAGTTCAGCAACCAGATCCAAA...GCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGACGTGCAAGCAGCTTTaGCCTTTTCTTTTCATATCC +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQTCKQL*PFLFIS
Trigger: GGATATGAAAAGAAAAGGGCAAAGCTGCTTGCACGT...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCAACGTGCAAGCAGCTTTaGCCTTTTCTTTTCATATCC +
Preference number: 4 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSTCKQL*PFLFIS
Trigger: GGATATGAAAAGAAAAGGGCAAAGCTGCTTGCACGT...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGTATTTGGCCAAAGCTaGTTGCACGGCTTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: FPSTAQRLPELQMKESTPVFGQS*LHGFSV
Trigger: CACACTGAAGCCGTGCAAGCAGCTTTGGCCAAATAC...GGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTAGTATTTGGCCAAAGCTaGTTGCACGGCTTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLVFGQS*LHGFSV
Trigger: CACACTGAAGCCGTGCAAGCAGCTTTGGCCAAATAC...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAGTTTCCACAGACGAATaGACAAGGACAGAACGTCTC +
Preference number: 4 (lower is better)
Translates to: EFKFAGLSIYCTKTSRAAVSTDE*TRTERL
Trigger: GAGACGTTCTGTCCTTGTGCATTCGTCTGTGGAAAC...TGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp TGTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACCCAGCATGCTCCCGCTaGACCCCCGAGGAACACTTC +
Preference number: 4 (lower is better)
Translates to: CTTIFRLCEFKFAGLSIYPACSR*TPEEHF
Trigger: GAAGTGTTCCTCGGGGGTGCAGCGGGAGCATGCTGG...GTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435722.7
CDS-3UTR GCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTGACAGGAACCAGCTCTaGCAGGAGACACCCATAAAA +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATDRNQL*QETPIK
Trigger: TTTTATGGGTGTCTCCTGGCAGAGCTGGTTCCTGTC...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAAGAAGACTCCACAGCTaGCCAGCAGAAACCCAACCT +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLRRLHS*PAETQP
Trigger: AGGTTGGGTTTCTGCTGGGCAGCTGTGGAGTCTTCT...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTGGGGGCTTGGCTAGATaGTTCCCATCAATCACTAGC +
Preference number: 4 (lower is better)
Translates to: AQLARLMCGELITALLGTGGLAR*FPSITS
Trigger: GCTAGTGATTGATGGGAAGCATCTAGCCAAGCCCCC...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTTCCTGGGCCAGAGGGTaGCAGTCCTTTGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTSWARG*QSFGGL
Trigger: CAAGCCCCCAAAGGACTGGCACCCTCTGGCCCAGGA...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTCCGTACTGCCTTCTTTaGTGGTTTTATACTCAATGT +
Preference number: 4 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTPYCLL*WFYTQC
Trigger: ACATTGAGTATAAAACCAGCAAAGAAGGCAGTACGG...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGCCGTACTGCCTTCTTTaGTGGTTTTATACTCAATGT +
Preference number: 4 (lower is better)
Translates to: YCTKTSRAANEGIYSRRGPYCLL*WFYTQC
Trigger: ACATTGAGTATAAAACCAGCAAAGAAGGCAGTACGG...CCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp TGTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACCTGTGCCAGCAGGGATaGGTGGGACACTGTGACCCC +
Preference number: 4 (lower is better)
Translates to: CTTIFRLCEFKFAGLSIYLCQQG*VGHCDP
Trigger: GGGGTCACAGTGTCCCACGCATCCCTGCTGGCACAG...GTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTTGTTAACACGCCATaGCACAGACCAGCATCCCTT +
Preference number: 4 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLLVNTP*HRPASL
Trigger: AAGGGATGCTGGTCTGTGGCATGGCGTGTTAACAAG...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAACTTGTTAACACGCCATaGCACAGACCAGCATCCCTT +
Preference number: 4 (lower is better)
Translates to: KFAGLSIYCTKTSRAANELVNTP*HRPASL
Trigger: AAGGGATGCTGGTCTGTGGCATGGCGTGTTAACAAG...TTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACGTGTGGGCACGCCACTaGAGCACGTCAGCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHVWARH*STSARN
Trigger: GTTCCTGGCTGACGTGCTGCAGTGGCGTGCCCACAC...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACCAGCTGGACACAGGTTaGAGTGCTTGTGACGGTGCC +
Preference number: 4 (lower is better)
Translates to: SRLILEKPGCFCEACMIHQLDTG*SACDGA
Trigger: GGCACCGTCACAAGCACTGCAACCTGTGTCCAGCTG...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGCGTGGTGAGGACGCATaGAGACTTGCTGACCTCCAC +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMRGEDA*RLADLH
Trigger: GTGGAGGTCAGCAAGTCTGCATGCGTCCTCACCACG...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGGTACAGCTCACACTaGAGCTTTATGGAGCGGCAT +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLGYSSH*SFMERH
Trigger: ATGCCGCTCCATAAAGCTGCAGTGTGAGCTGTACCC...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGCCACAGGGACACGTTaGTCTCCAGCTCCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYATGTR*SPAPAG
Trigger: CCCCGCTGGAGCTGGAGAGCAACGTGTCCCTGTGGC...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCCCTGTCATGGCGCAGTaGCCGCATGTCCACGTAGAC +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVPVMAQ*PHVHVD
Trigger: GTCTACGTGGACATGCGGGCACTGCGCCATGACAGG...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGCCTGTCATGGCGCAGTaGCCGCATGTCCACGTAGAC +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWPVMAQ*PHVHVD
Trigger: GTCTACGTGGACATGCGGGCACTGCGCCATGACAGG...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTTTTTGGAGGACACTCTaGTGTTCACAGGGACACCTA +
Preference number: 4 (lower is better)
Translates to: LGFPSTAQRLPELQMKESFWRTL*CSQGHL
Trigger: TAGGTGTCCCTGTGAACAGCAGAGTGTCCTCCAAAA...AGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466639.5
CDS-3UTR CCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGGAGACTTCTGCTGCTTaGGTGCAGCGGCCGTGGTTT +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMETSAA*VQRPWF
Trigger: AAACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTC...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TGTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACCATCCCTCGAGGCGGTaGGCCGAGACTTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: CTTIFRLCEFKFAGLSIYHPSRR*AETSAA
Trigger: AGCAGCAGAAGTCTCGGCCCACCGCCTCGAGGGATG...GTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACCATCCCTCGAGGCGGTaGGCCGAGACTTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHHPSRR*AETSAA
Trigger: AGCAGCAGAAGTCTCGGCCCACCGCCTCGAGGGATG...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACGGCTCGACGCTGGAATaGCTCTGGAGCGGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHGSTLE*LWSGVE
Trigger: CTCCACTCCGCTCCAGAGCCATTCCAGCGTCGAGCC...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGCGTGGCTGCAGCACTaGGAGCAGTGGTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYAWLQH*EQWWVS
Trigger: GGAGACCCACCACTGCTCCCAGTGCTGCAGCCACGC...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTCACAGAAGCCACCTGTaGACGCTCAAAGTACGAATG +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATHRSHL*TLKVRM
Trigger: CATTCGTACTTTGAGCGTCCACAGGTGGCTTCTGTG...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCATTAATGGCACTTCTATaGGGACAGGAACCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: EFKFAGLSIYCTKTSRAALMALL*GQEPAL
Trigger: CAGAGCTGGTTCCTGTCCCCATAGAAGTGCCATTAA...TGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTTCTGACAAGCGTCTGTaGTCAGGGCCAAGAAGACTC +
Preference number: 4 (lower is better)
Translates to: AQLARLMCGELITALLGTSDKRL*SGPRRL
Trigger: GAGTCTTCTTGGCCCTGACCACAGACGCTTGTCAGA...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTAGTCCTTTGGGGGCTTaGCTAGATGCTTCCCATCAA +
Preference number: 4 (lower is better)
Translates to: CEFKFAGLSIYCTKTSRASPLGA*LDASHQ
Trigger: TTGATGGGAAGCATCTAGCCAAGCCCCCAAAGGACT...AGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp AATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAAGTCCTTTGGGGGCTTaGCTAGATGCTTCCCATCAA +
Preference number: 4 (lower is better)
Translates to: NSSLLGFPSTAQRLPELQSPLGA*LDASHQ
Trigger: TTGATGGGAAGCATCTAGCCAAGCCCCCAAAGGACT...TTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp TTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACCACGGCCAGTGCGGTaGCCACAACGTCATCTGCAT +
Preference number: 4 (lower is better)
Translates to: FLGFVNSSLLGFPSTAQRPRPVR*PQRHLH
Trigger: ATGCAGATGACGTTGTGGCCACCGCACTGGCCGTGG...TCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGGGCCAGCTGTGCCCTaGAGGCAGATGGCCACGTTG +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYGPAVP*RQMATL
Trigger: CAACGTGGCCATCTGCCTCCAGGGCACAGCTGGCCC...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400274.5
ENST00000417564.3
CDS-3UTR CCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAGTTTCTCCCCGTAAATaGTCTCAAGTTTCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTVSPRK*SQVSPV
Trigger: TACGGGAGAAACTTGAGACCATTTACGGGGAGAAAC...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCTTCCCTCAGGCTTTaGCTGATTTGGATCTGGTTG +
Preference number: 4 (lower is better)
Translates to: CEFKFAGLSIYCTKTSRAASLRL*LIWIWL
Trigger: CAACCAGATCCAAATCAGCCAAAGCCTGAGGGAAGC...AGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp TTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGCTTCCCTCAGGCTTTaGCTGATTTGGATCTGGTTG +
Preference number: 4 (lower is better)
Translates to: FPSTAQRLPELQMKESTPASLRL*LIWIWL
Trigger: CAACCAGATCCAAATCAGCCAAAGCCTGAGGGAAGC...GGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp ACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAGGAGGATGCAGAGGATaGGGTGGACGAGCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: TIFRLCEFKFAGLSIYCTGGCRG*GGRALN
Trigger: ATTCAGGGCTCGTCCACCTCATCCTCTGCATCCTCC...TGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGCATAAAATGCAACCATaGACATCACAGGGTCACTAT +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQHKMQP*TSQGHY
Trigger: ATAGTGACCCTGTGATGTTCATGGTTGCATTTTATG...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTGACCAGCATCCCTTTTaGAATCCAGCACGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: LGFPSTAQRLPELQMKESDQHPF*NPARLL
Trigger: TAACAAACGTGCTGGATTTCAAAAGGGATGCTGGTC...AGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp TTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCCAGTTGCACTGGAACTaGCGCATATTTCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: FPSTAQRLPELQMKESTPQLHWN*RIFLPL
Trigger: AAGTGGGAGAAATATGCGTCAGTTCCAGTGCAACTG...GGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp TGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTCAGTTGCACTGGAACTaGCGCATATTTCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: CEFKFAGLSIYCTKTSRAQLHWN*RIFLPL
Trigger: AAGTGGGAGAAATATGCGTCAGTTCCAGTGCAACTG...AGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp ACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAGTGCTCCTCCTGTGGTaGCCGGAACTGCCTCAAACA +
Preference number: 4 (lower is better)
Translates to: TIFRLCEFKFAGLSIYCTVLLLW*PELPQT
Trigger: TGTTTGAGGCAGTTCCGGTCACCACAGGAGGAGCAC...TGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp ACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACACCAGTTTGCCCACGATaGAGACCAGGTTGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: TIFRLCEFKFAGLSIYCTPVCPR*RPGCQA
Trigger: GGCCTGACAACCTGGTCTTCATCGTGGGCAAACTGG...TGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGGTCTGCGAACTCCAGTaGCCATCAGCCCGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWVCELQ*PSARPV
Trigger: AACTGGACGGGCTGATGGTCACTGGAGTTCGCAGAC...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTATTGGTTTCAGAAATGTaGATCCCTCCGAGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLLVSEM*IPPRGA
Trigger: GGCTCCTCTCGGAGGGATTCACATTTCTGAAACCAA...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTTTGGTAACACAGGTGTaGGGGCACATCAGCACATTA +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATLVTQV*GHISTL
Trigger: TAATGTGCTGATGTGCCCTCACACCTGTGTTACCAA...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTAGTAGGAGCAGAAGGTaGCGCGGGCCTTGTACTGGC +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTSRSRR*RGPCTG
Trigger: GCCAGTACAAGGCCCGCGTCACCTTCTGCTCCTACT...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGGCAGGTTGGTCCAGGTaGATACGGCACACTCAGCGA +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWAGWSR*IRHTQR
Trigger: TCGCTGAGTGTGCCGTATTCACCTGGACCAACCTGC...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACCAAAATGGCACTTATTaGGTGTCCGTGACAATACAT +
Preference number: 4 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHQNGTY*VSVTIH
Trigger: ATGTATTGTCACGGACACTCAATAAGTGCCATTTTG...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACAGCTTTGTTAGGCACTaGTCCAGACTAATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHSFVRH*SRLILE
Trigger: TTCCAGAATTAGTCTGGATCAGTGCCTAACAAAGCT...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAAAGCGGTATATAACGTaGAAGCAGCTTTGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTKRYIT*KQLCPF
Trigger: AAAAGGGCAAAGCTGCTTGCACGTTATATACCGCTT...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGTTTCCACAGACGAATaGACAAGGACAGAACGTCTC +
Preference number: 4 (lower is better)
Translates to: KFAGLSIYCTKTSRAANEVSTDE*TRTERL
Trigger: GAGACGTTCTGTCCTTGTGCATTCGTCTGTGGAAAC...TTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCCGCTCAAAGTACGAATaGTCCACGAGGCCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVRSKYE*STRPVV
Trigger: CACCACGGGCCTCGTGGAGCATTCGTACTTTGAGCG...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGCGCTCAAAGTACGAATaGTCCACGAGGCCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWRSKYE*STRPVV
Trigger: CACCACGGGCCTCGTGGAGCATTCGTACTTTGAGCG...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACCACAGGGACACCATCTaGTGTTTCCAGCATGCTCCC +
Preference number: 4 (lower is better)
Translates to: SRLILEKPGCFCEACMIHHRDTI*CFQHAP
Trigger: GGGAGCATGCTGGAAACAGCAGATGGTGTCCCTGTG...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCTTTTGGAGGACACTCTaGTGTTCACAGGGACACCAT +
Preference number: 4 (lower is better)
Translates to: GFVNSSLLGFPSTAQRLPFWRTL*CSQGHH
Trigger: ATGGTGTCCCTGTGAACAGCAGAGTGTCCTCCAAAA...GGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435722.7
CDS-3UTR GCA 90 bp ACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAATTTGGGCTGTGTTGTaGCCCAGCGCTGCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: TIFRLCEFKFAGLSIYCTIWAVL*PSAARW
Trigger: CCACCTTGCAGCGCTGGGGCACAACACAGCCCAAAT...TGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACGAGACACCCATAAAATaGAACCATGAACATCACAGG +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHETPIK*NHEHHR
Trigger: CCTGTGATGTTCATGGTTGCATTTTATGGGTGTCTC...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAGAGACACCCATAAAATaGAACCATGAACATCACAGG +
Preference number: 4 (lower is better)
Translates to: STPLSIKELAEEALCVTTETPIK*NHEHHR
Trigger: CCTGTGATGTTCATGGTTGCATTTTATGGGTGTCTC...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTGACAGGAACCAGCTCTaGCAGGAGACACCCATAAAA +
Preference number: 4 (lower is better)
Translates to: AQLARLMCGELITALLGTDRNQL*QETPIK
Trigger: TTTTATGGGTGTCTCCTGGCAGAGCTGGTTCCTGTC...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GCAATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACACCGTACTGCCTTCTTTaGTGGTTTTATACTCAATGT +
Preference number: 4 (lower is better)
Translates to: AMKNTDKQSWSQGGPGGTPYCLL*WFYTQC
Trigger: ACATTGAGTATAAAACCAGCAAAGAAGGCAGTACGG...TGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATCCAGATCAGGTGGCCTaGGGATGGCGACAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYPDQVA*GWRQSA
Trigger: CGCTGACTGTCGCCATCCGCAGGCCACCTGATCTGG...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGCGCCCACCTGGTGGATaGTATCAATGGCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWRPPGG*YQWPAA
Trigger: TGCTGCAGGCCATTGATAGCATCCACCAGGTGGGCG...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGGAACAGGAACTTCCGTaGCTGGTCGCTGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWEQELP*LVAVLQ
Trigger: CTGGAGGACAGCGACCAGGCACGGAAGTTCCTGTTC...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACCCTCGGCGACCACCATaGACGTGCGCACACATGACA +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHPRRPP*TCAHMT
Trigger: TGTCATGTGTGCGCACGTGCATGGTGGTCGCCGAGG...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTCCTGTCATGGCGCAGTaGCCGCATGTCCACGTAGAC +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTPVMAQ*PHVHVD
Trigger: GTCTACGTGGACATGCGGGCACTGCGCCATGACAGG...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGAAGGTAGCCGGTCCTTaGCCAGATGGTCTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMKVAGP*PDGLCV
Trigger: GACACACAGACCATCTGGGCAAGGACCGGCTACCTT...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTTGTGATTCCTCACAATaGCCATGCCAGGCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: AQLARLMCGELITALLGTCDSSQ*PCQAFP
Trigger: AGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACA...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTATGATTCACAAAATTTaGCACCCTCAATACCCCAAA +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLMIHKI*HPQYPK
Trigger: TTTGGGGTATTGAGGGTGGCAAATTTTGTGAATCAT...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp ACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACATGCACGGCTTCAGTGTaGACATCTGACCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: TIFRLCEFKFAGLSIYCTCTASV*TSDRKR
Trigger: GCGCTTCCGGTCAGATGTCCACACTGAAGCCGTGCA...TGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGAGATCTATGTGGGTGTaGGCCTCGAGGCCTGCGAGT +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWRSMWV*ASRPAS
Trigger: ACTCGCAGGCCTCGAGGCCCACACCCACATAGATCT...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCACAGAAGCCACCTGTaGACGCTCAAAGTACGAATG +
Preference number: 4 (lower is better)
Translates to: RLCEFKFAGLSIYCTKTSHRSHL*TLKVRM
Trigger: CATTCGTACTTTGAGCGTCCACAGGTGGCTTCTGTG...GGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435722.7
CDS-3UTR CCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTCACAGAAGCCACCTGTaGACGCTCAAAGTACGAATG +
Preference number: 4 (lower is better)
Translates to: AQLARLMCGELITALLGTHRSHL*TLKVRM
Trigger: CATTCGTACTTTGAGCGTCCACAGGTGGCTTCTGTG...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAAAAGAACTCCTTCAGTaGAGGGCGCTTTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLKELLQ*RALWPL
Trigger: AAGAGGCCAAAGCGCCCTCCACTGAAGGAGTTCTTT...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAAGTCCTTTGGGGGCTTaGCTAGATGCTTCCCATCAA +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLSPLGA*LDASHQ
Trigger: TTGATGGGAAGCATCTAGCCAAGCCCCCAAAGGACT...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCTACTGCCTTCTTTGCTaGTTTTATACTCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: ASTPLSIKELAEEALCVTYCLLC*FYTQCR
Trigger: CCTACATTGAGTATAAAACCAGCAAAGAAGGCAGTA...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGAGGACAGATGACCTCTaGCCTCAGACCTCTGGACTG +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMRTDDL*PQTSGL
Trigger: CAGTCCAGAGGTCTGAGGCCAGAGGTCATCTGTCCT...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TGTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACCCACGGCCAGTGCGGTaGCCACAACGTCATCTGCAT +
Preference number: 4 (lower is better)
Translates to: CTTIFRLCEFKFAGLSIYPRPVR*PQRHLH
Trigger: ATGCAGATGACGTTGTGGCCACCGCACTGGCCGTGG...GTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATTGGTCAGGAGTGGTGTaGGCACGCCACTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYWSGVV*ARHCST
Trigger: CGTGCTGCAGTGGCGTGCCCACACCACTCCTGACCA...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTGCTTCCCTCAGGCTTTaGCTGATTTGGATCTGGTTG +
Preference number: 4 (lower is better)
Translates to: AQLARLMCGELITALLGTASLRL*LIWIWL
Trigger: CAACCAGATCCAAATCAGCCAAAGCCTGAGGGAAGC...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACCATATCCTTTTTGAGTaGTGTCACCTTCCGACAGCT +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHHILFE*CHLPTA
Trigger: AGCTGTCGGAAGGTGACATCACTCAAAAAGGATATG...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCCATATCCTTTTTGAGTaGTGTCACCTTCCGACAGCT +
Preference number: 4 (lower is better)
Translates to: FPSTAQRLPELQMKESTPHILFE*CHLPTA
Trigger: AGCTGTCGGAAGGTGACATCACTCAAAAAGGATATG...GGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp TTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGAAGCGGCCGTGGTTTGTaGGGGCCCAGGAATTCTATT +
Preference number: 4 (lower is better)
Translates to: FLGFVNSSLLGFPSTAQRSGRGL*GPRNSI
Trigger: AATAGAATTCCTGGGCCCTCACAAACCACGGCCGCT...TCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp CAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGCGGCCGTGGTTTGTaGGGGCCCAGGAATTCTATT +
Preference number: 4 (lower is better)
Translates to: QFLGFVNSSLLGFPSTAQSGRGL*GPRNSI
Trigger: AATAGAATTCCTGGGCCCTCACAAACCACGGCCGCT...TTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp AATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAGACCAGCATCCCTTTTaGAATCCAGCACGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: NSSLLGFPSTAQRLPELQDQHPF*NPARLL
Trigger: TAACAAACGTGCTGGATTTCAAAAGGGATGCTGGTC...TTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTCAGTTGCACTGGAACTaGCGCATATTTCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: AQLARLMCGELITALLGTQLHWN*RIFLPL
Trigger: AAGTGGGAGAAATATGCGTCAGTTCCAGTGCAACTG...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TGTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACCCAGTTTGCCCACGATaGAGACCAGGTTGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: CTTIFRLCEFKFAGLSIYPVCPR*RPGCQA
Trigger: GGCCTGACAACCTGGTCTTCATCGTGGGCAAACTGG...GTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACGTCTGCGAACTCCAGTaGCCATCAGCCCGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHVCELQ*PSARPV
Trigger: AACTGGACGGGCTGATGGTCACTGGAGTTCGCAGAC...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGACCTCTGGTTGTTTCTaGCGAGGTTTGGGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMTSGCF*RGLGRL
Trigger: CAACCTCCCCAAACCTCGTCAGAAACAACCAGAGGT...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACAGGTTGCAGTGCTTGTaGCGGTGCCCTTGGCGTTCA +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHRLQCL*RCPWRS
Trigger: TGAACGCCAAGGGCACCGTCACAAGCACTGCAACCT...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATCCTCCACGATCATCTTaGCGGTGGGCAGTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYPPRSS*RWAVWC
Trigger: GCACCACACTGCCCACCGTCAAGATGATCGTGGAGG...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGCAACCTCGGTGCCTGTaGTTCCTCACAATGCCCATG +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWQPRCL*FLTMPM
Trigger: CATGGGCATTGTGAGGAATCACAGGCACCGAGGTTG...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACATTCTATTCTCTGCTTaGAGAGATGGGTCTATTCCT +
Preference number: 4 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHILFSA*RDGSIP
Trigger: AGGAATAGACCCATCTCTGCAAGCAGAGAATAGAAT...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TTTGCAATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGATTCTATTCTCTGCTTaGAGAGATGGGTCTATTCCT +
Preference number: 4 (lower is better)
Translates to: FAMKNTDKQSWSQGGPGGILFSA*RDGSIP
Trigger: AGGAATAGACCCATCTCTGCAAGCAGAGAATAGAAT...CCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCATTGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp TTTGCAATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGAGGAATTCTATTCTCTaGTTGCAGAGATGGGTCTAT +
Preference number: 4 (lower is better)
Translates to: FAMKNTDKQSWSQGGPGGRNSIL*LQRWVY
Trigger: ATAGACCCATCTCTGCAAGCAGAGAATAGAATTCCT...CCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCATTGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR GCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGTTGGCCAAAGCTGCTTaGACGGCTTCAGTGTGGACA +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMLAKAA*TASVWT
Trigger: TGTCCACACTGAAGCCGTGCAAGCAGCTTTGGCCAA...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TGTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACCGCTCAAAGTACGAATaGTCCACGAGGCCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: CTTIFRLCEFKFAGLSIYRSKYE*STRPVV
Trigger: CACCACGGGCCTCGTGGAGCATTCGTACTTTGAGCG...GTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435722.7
CDS-3UTR GCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGGGCCACAACGTCATCTaGATTGTGTCTGCGAACTCC +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMGHNVI*IVSANS
Trigger: GGAGTTCGCAGACACAATGCAGATGACGTTGTGGCC...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGGGGTACAGCTCACACTaGAGCTTTATGGAGCGGCAT +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMGYSSH*SFMERH
Trigger: ATGCCGCTCCATAAAGCTGCAGTGTGAGCTGTACCC...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACGGGTACAGCTCACACTaGAGCTTTATGGAGCGGCAT +
Preference number: 4 (lower is better)
Translates to: SRLILEKPGCFCEACMIHGYSSH*SFMERH
Trigger: ATGCCGCTCCATAAAGCTGCAGTGTGAGCTGTACCC...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGATCAATGGCAGGCTGTaGGGAGAACCCCGTTCTACC +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWINGRL*GEPRST
Trigger: GGTAGAACGGGGTTCTCCGCACAGCCTGCCATTGAT...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGTGGCATTGTGGGGGCTaGTTACCCAGATCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWWHCGG*LPRSLP
Trigger: TGGGAGAGATCTGGGTAAGCAGCCCCCACAATGCCA...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACCATCACACCTTGGACTaGTGGGGCTCATTCATCTCC +
Preference number: 4 (lower is better)
Translates to: SRLILEKPGCFCEACMIHHHTLD*WGSFIS
Trigger: GGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATG...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTTGTTTCTGTGAAGCATaGATGATTCACAAAATTTGC +
Preference number: 4 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLCFCEA*MIHKIC
Trigger: GCAAATTTTGTGAATCATGCATGCTTCACAGAAACA...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGAGACTTCTGCTGCTTaGGTGCAGCGGCCGTGGTTT +
Preference number: 4 (lower is better)
Translates to: VQQFLGFVNSSLLGFPSTETSAA*VQRPWF
Trigger: AAACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTC...AGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp TGTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACGGCTTCAGTGTaGACATCTGACCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: CTTIFRLCEFKFAGLSIYCTASV*TSDRKR
Trigger: GCGCTTCCGGTCAGATGTCCACACTGAAGCCGTGCA...GTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp GTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTCAGTGGAGGGCGCTTTaGCCTCTTCAGGGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: VQQFLGFVNSSLLGFPSTQWRAL*PLQGVQ
Trigger: CTGAACACCCTGAAGAGGCCAAAGCGCCCTCCACTG...AGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACTCAGACAGGGGGATTTaGGCTGTGTTGTGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHSDRGI*AVLCPS
Trigger: GCTGGGGCACAACACAGCCCAAATCCCCCTGTCTGA...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTTCAGACAGGGGGATTTaGGCTGTGTTGTGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: VQQFLGFVNSSLLGFPSTSDRGI*AVLCPS
Trigger: GCTGGGGCACAACACAGCCCAAATCCCCCTGTCTGA...AGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCATACTGCCTTCTTTGCTaGTTTTATACTCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSYCLLC*FYTQCR
Trigger: CCTACATTGAGTATAAAACCAGCAAAGAAGGCAGTA...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGAAGATCGACCACGGGTTaGCACCATCGGCCACAATCA +
Preference number: 4 (lower is better)
Translates to: FLGFVNSSLLGFPSTAQRRSTTG*HHRPQS
Trigger: TGATTGTGGCCGATGGTGCCAACCCGTGGTCGATCT...TCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCCTCAGACCTCTGGACTaGAAGACGTTGAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVLRPLD*KTLRKA
Trigger: CGCCTTCCTCAACGTCTTCCAGTCCAGAGGTCTGAG...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAGCCTGTCCTGGTGAATaGCCTGTCAAAGATGGGTGC +
Preference number: 4 (lower is better)
Translates to: QFLGFVNSSLLGFPSTAQACPGE*PVKDGC
Trigger: GCACCCATCTTTGACAGGCCATTCACCAGGACAGGC...TTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACAGCAAGAACAGCGGGTaGTCAGGAGTGGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHSKNSG*SGVVWA
Trigger: TGCCCACACCACTCCTGACCACCCGCTGTTCTTGCT...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCCAAGCTCCGCCTCCCTaGTTCATACCATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVQAPPP*FIPFSC
Trigger: GCAGGAGAATGGTATGAACCAGGGAGGCGGAGCTTG...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGAGCCAGACTCATGTGTaGAGAATTAATAACAGCTTT +
Preference number: 4 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQSQTHV*RINNSF
Trigger: AAAGCTGTTATTAATTCTCCACACATGAGTCTGGCT...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACTTCAGTGTGGACATCTaGCCGGAAGCGCTCATCCCT +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHFSVDI*PEALIP
Trigger: AGGGATGAGCGCTTCCGGTCAGATGTCCACACTGAA...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAAAAGTTTACCATAGGTaGGAGTGTAGACGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLKVYHR*ECRRLS
Trigger: GGAAAGCCGTCTACACTCTCACCTATGGTAAACTTT...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATAATCAGCATGCGCAGTaGGCTGAGGCTGACGTCCCT +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYNQHAQ*AEADVP
Trigger: AGGGACGTCAGCCTCAGCTCACTGCGCATGCTGATT...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTCTGAACAGTAAGGACTaGCAACTTTTCTTCAGTATC +
Preference number: 4 (lower is better)
Translates to: LGFPSTAQRLPELQMKESLNSKD*QLFFSI
Trigger: GATACTGAAGAAAAGTTGTCAGTCCTTACTGTTCAG...AGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp CTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTCAAACACATTCTTCGTaGTTCCAAGCAATCCATAGT +
Preference number: 4 (lower is better)
Translates to: LGFPSTAQRLPELQMKESQTHSS*FQAIHS
Trigger: ACTATGGATTGCTTGGAATCACGAAGAATGTGTTTG...AGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGTGCTCCTCCTGTGGTaGCCGGAACTGCCTCAAACA +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYVLLLW*PELPQT
Trigger: TGTTTGAGGCAGTTCCGGTCACCACAGGAGGAGCAC...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGTTGGTTTCAGAAATGTaGATCCCTCCGAGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMLVSEM*IPPRGA
Trigger: GGCTCCTCTCGGAGGGATTCACATTTCTGAAACCAA...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGTTCCCCACGATCATTaGGGCTGGTCCAACCTCTGG +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYVPHDH*GWSNLW
Trigger: CCAGAGGTTGGACCAGCCTCAATGATCGTGGGGAAC...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATCTCCACTGGCATCAGTaGGCTCTGTTCGCCGAAGGA +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYLHWHQ*ALFAEG
Trigger: TCCTTCGGCGAACAGAGCTCACTGATGCCAGTGGAG...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACGGTACCGCATGCCTCTaGGCTCCAGAGTTTCATCCA +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHGTACL*APEFHP
Trigger: TGGATGAAACTCTGGAGCTCAGAGGCATGCGGTACC...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTGGTACCGCATGCCTCTaGGCTCCAGAGTTTCATCCA +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTGTACL*APEFHP
Trigger: TGGATGAAACTCTGGAGCTCAGAGGCATGCGGTACC...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACAGATGCGGGGATTGTTaGGAGGGATCTGTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SRLILEKPGCFCEACMIHRCGDC*EGSVRA
Trigger: TGCTCTTACAGATCCCTCTCAACAATCCCCGCATCT...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACCCATCAGCCTCCCTGTaGAACAGAAGTGAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHPSASL*NRSEAA
Trigger: AGCTGCCTCACTTCTGTTTCACAGGGAGGCTGATGG...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTACCTGGTTGTTTCTGTaGAGCATGCATGATTCACAA +
Preference number: 4 (lower is better)
Translates to: VCHNILYHSPTPWGNRATTWLFL*SMHDSQ
Trigger: TTGTGAATCATGCATGCTTCACAGAAACAACCAGGT...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACACCTGGTTGTTTCTGTaGAGCATGCATGATTCACAA +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHTWLFL*SMHDSQ
Trigger: TTGTGAATCATGCATGCTTCACAGAAACAACCAGGT...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCGACAGGAGTAAAACATaGGAGCTGGCCCAGTTAGCC +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVDRSKT*ELAQLA
Trigger: GGCTAACTGGGCCAGCTCTCATGTTTTACTCCTGTC...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAATTTGGATCTGGTTGCTaGACTTCCAACAATTCCTCA +
Preference number: 4 (lower is better)
Translates to: KFAGLSIYCTKTSRAANEFGSGC*TSNNSS
Trigger: TGAGGAATTGTTGGAAGTTCAGCAACCAGATCCAAA...TTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp AAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAACGTGCAAGCAGCTTTaGCCTTTTCTTTTCATATCC +
Preference number: 4 (lower is better)
Translates to: KFAGLSIYCTKTSRAANETCKQL*PFLFIS
Trigger: GGATATGAAAAGAAAAGGGCAAAGCTGCTTGCACGT...TTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp AAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAAAGCGGTATATAACGTaGAAGCAGCTTTGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: KFAGLSIYCTKTSRAANEKRYIT*KQLCPF
Trigger: AAAAGGGCAAAGCTGCTTGCACGTTATATACCGCTT...TTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACACCCAACCTGCTGGCTaGCTGCATCCTTTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: SRLILEKPGCFCEACMIHTQPAG*LHPFLL
Trigger: TAACAAGAAAGGATGCAGGCAGCCAGCAGGTTGGGT...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGACCCAACCTGCTGGCTaGCTGCATCCTTTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMTQPAG*LHPFLL
Trigger: TAACAAGAAAGGATGCAGGCAGCCAGCAGGTTGGGT...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTACCCAACCTGCTGGCTaGCTGCATCCTTTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: FRLCEFKFAGLSIYCTKTTQPAG*LHPFLL
Trigger: TAACAAGAAAGGATGCAGGCAGCCAGCAGGTTGGGT...AGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGAGCAGAAACCCAACCTaGTGGCTGCCTGCATCCTTT +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWSRNPT*WLPASF
Trigger: AAAGGATGCAGGCAGCCAGCAGGTTGGGTTTCTGCT...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACCAACCTTTGAAAGCTaGCACCTCTCCTGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: FLGFVNSSLLGFPSTAQRPTFES*HLSCLC
Trigger: GCACAGACAGGAGAGGTGGCAGCTTTCAAAGGTTGG...TCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACGCTAGGAGAGACCAGTaGATGTCTCGCGACTTCACC +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHARRDQ*MSRDFT
Trigger: GGTGAAGTCGCGAGACATGCACTGGTCTCTCCTAGC...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACGTTCATCGACAGGACTaGTTTTCTTGGAGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: SRLILEKPGCFCEACMIHVHRQD*FSWRWS
Trigger: GGACCACCTCCAAGAAAAGCAGTCCTGTCGATGAAC...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACGTACGCTGTGCCAGTTaGACTGGAACTGACGCATAT +
Preference number: 4 (lower is better)
Translates to: SRLILEKPGCFCEACMIHVRCAS*TGTDAY
Trigger: ATATGCGTCAGTTCCAGTGCAACTGGCACAGCGTAC...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTGTACGCTGTGCCAGTTaGACTGGAACTGACGCATAT +
Preference number: 4 (lower is better)
Translates to: FRLCEFKFAGLSIYCTKTVRCAS*TGTDAY
Trigger: ATATGCGTCAGTTCCAGTGCAACTGGCACAGCGTAC...AGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTCGACCACCATGCACGTaGGCACACATGACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTRPPCT*AHMTGS
Trigger: TGAACCTGTCATGTGTGCGCACGTGCATGGTGGTCG...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGTTCAATACGGGGCAATaGTGTTCCCTGCTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWFNTGQ*CSLLPS
Trigger: TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAA...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATACGCTGGAATGGCTCTaGAGCGGAGTGGAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYTLEWL*SGVEVS
Trigger: ACTCACCTCCACTCCGCTCCAGAGCCATTCCAGCGT...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACAAAGAACTCCTTCAGTaGAGGGCGCTTTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SRLILEKPGCFCEACMIHKELLQ*RALWPL
Trigger: AAGAGGCCAAAGCGCCCTCCACTGAAGGAGTTCTTT...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGTCTGACAAGCGTCTGTaGTCAGGGCCAAGAAGACTC +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWSDKRL*SGPRRL
Trigger: GAGTCTTCTTGGCCCTGACCACAGACGCTTGTCAGA...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp ACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACATCTGACAAGCGTCTGTaGTCAGGGCCAAGAAGACTC +
Preference number: 4 (lower is better)
Translates to: TIFRLCEFKFAGLSIYCTSDKRL*SGPRRL
Trigger: GAGTCTTCTTGGCCCTGACCACAGACGCTTGTCAGA...TGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTCTCCTGTCTGTGCCTTaGGGAGGCCTTTCTGACAAG +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTLLSVP*GGLSDK
Trigger: CTTGTCAGAAAGGCCTCCCCAAGGCACAGACAGGAG...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TGTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACCTCAGACCTCTGGACTaGAAGACGTTGAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: CTTIFRLCEFKFAGLSIYLRPLD*KTLRKA
Trigger: CGCCTTCCTCAACGTCTTCCAGTCCAGAGGTCTGAG...GTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp ACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACATGCTTTTCTTGGAGGTaGTCCTCCCAGATCAGGTGG +
Preference number: 4 (lower is better)
Translates to: TIFRLCEFKFAGLSIYCTCFSWR*SSQIRW
Trigger: CCACCTGATCTGGGAGGACCACCTCCAAGAAAAGCA...TGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGTGCTTTTCTTGGAGGTaGTCCTCCCAGATCAGGTGG +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWCFSWR*SSQIRW
Trigger: CCACCTGATCTGGGAGGACCACCTCCAAGAAAAGCA...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTGGTGGATGCTATCAATaGCCTGCAGCACACGGCTCA +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTGGCYQ*PAAHGS
Trigger: TGAGCCGTGTGCTGCAGGCCATTGATAGCATCCACC...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACGGCTGGTCCAACCTCTaGTTGTTTCTGACGAGGTTT +
Preference number: 4 (lower is better)
Translates to: SRLILEKPGCFCEACMIHGWSNL*LFLTRF
Trigger: AAACCTCGTCAGAAACAACCAGAGGTTGGACCAGCC...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGGCATAAGGCGCTTGTaGCCGCGTGCGACATCTTCA +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYGIRRL*PRATSS
Trigger: TGAAGATGTCGCACGCGGCCACAAGCGCCTTATGCC...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGATAGGGATCACCCCTaGGTCCACGATGACCACCAC +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYDRDHP*VHDDHH
Trigger: GTGGTGGTCATCGTGGACCCAGGGGTGATCCCTATC...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTGTTTCTCCCCGTAAATaGTCTCAAGTTTCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: AQLARLMCGELITALLGTVSPRK*SQVSPV
Trigger: TACGGGAGAAACTTGAGACCATTTACGGGGAGAAAC...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTTGGCTGATTTGGATCTaGTTGCTGAACTTCCAACAA +
Preference number: 4 (lower is better)
Translates to: CEFKFAGLSIYCTKTSRAWLIWI*LLNFQQ
Trigger: TTGTTGGAAGTTCAGCAACCAGATCCAAATCAGCCA...AGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp AGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCAGGCTTTGGCTGATTTaGATCTGGTTGCTGAACTTC +
Preference number: 4 (lower is better)
Translates to: RLCEFKFAGLSIYCTKTSRLWLI*IWLLNF
Trigger: GAAGTTCAGCAACCAGATCCAAATCAGCCAAAGCCT...GGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp AATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAACATAAAATGCAACCATaGACATCACAGGGTCACTAT +
Preference number: 4 (lower is better)
Translates to: NSSLLGFPSTAQRLPELQHKMQP*TSQGHY
Trigger: ATAGTGACCCTGTGATGTTCATGGTTGCATTTTATG...TTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTGAACAGTAAGGACTaGCAACTTTTCTTCAGTATC +
Preference number: 4 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLLNSKD*QLFFSI
Trigger: GATACTGAAGAAAAGTTGTCAGTCCTTACTGTTCAG...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTCTGAACAGTAAGGACTaGCAACTTTTCTTCAGTATC +
Preference number: 4 (lower is better)
Translates to: CEFKFAGLSIYCTKTSRALNSKD*QLFFSI
Trigger: GATACTGAAGAAAAGTTGTCAGTCCTTACTGTTCAG...AGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACAAACACATTCTTCGTaGTTCCAAGCAATCCATAGT +
Preference number: 4 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLQTHSS*FQAIHS
Trigger: ACTATGGATTGCTTGGAATCACGAAGAATGTGTTTG...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGCCTGTGAAACAGAAGTaGGGCAGCTGGTTTGTACTC +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWPVKQK*GSWFVL
Trigger: GAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGG...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAACCTGGTTGTTTCTGTaGAGCATGCATGATTCACAA +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLTWLFL*SMHDSQ
Trigger: TTGTGAATCATGCATGCTTCACAGAAACAACCAGGT...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAAGCTTTGTTAGGCACTaGTCCAGACTAATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLSFVRH*SRLILE
Trigger: TTCCAGAATTAGTCTGGATCAGTGCCTAACAAAGCT...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATTCTATTCTCTGCTTaGAGAGATGGGTCTATTCCT +
Preference number: 4 (lower is better)
Translates to: NSSLLGFPSTAQRLPELQILFSA*RDGSIP
Trigger: AGGAATAGACCCATCTCTGCAAGCAGAGAATAGAAT...TTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp GGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCATTCTATTCTCTGCTTaGAGAGATGGGTCTATTCCT +
Preference number: 4 (lower is better)
Translates to: GFVNSSLLGFPSTAQRLPILFSA*RDGSIP
Trigger: AGGAATAGACCCATCTCTGCAAGCAGAGAATAGAAT...GGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTAATTCTATTCTCTGCTTaGAGAGATGGGTCTATTCCT +
Preference number: 4 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLILFSA*RDGSIP
Trigger: AGGAATAGACCCATCTCTGCAAGCAGAGAATAGAAT...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCAGGAATTCTATTCTCTaGTTGCAGAGATGGGTCTAT +
Preference number: 4 (lower is better)
Translates to: GFVNSSLLGFPSTAQRLPRNSIL*LQRWVY
Trigger: ATAGACCCATCTCTGCAAGCAGAGAATAGAATTCCT...GGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGAGACACCCATAAAATaGAACCATGAACATCACAGG +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLETPIK*NHEHHR
Trigger: CCTGTGATGTTCATGGTTGCATTTTATGGGTGTCTC...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TGTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACAGCAGAAACCCAACCTaGTGGCTGCCTGCATCCTTT +
Preference number: 4 (lower is better)
Translates to: CTTIFRLCEFKFAGLSIYSRNPT*WLPASF
Trigger: AAAGGATGCAGGCAGCCAGCAGGTTGGGTTTCTGCT...GTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTAGAAGACTCCACAGCTaGCCAGCAGAAACCCAACCT +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTRRLHS*PAETQP
Trigger: AGGTTGGGTTTCTGCTGGGCAGCTGTGGAGTCTTCT...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACCCAACCTTTGAAAGCTaGCACCTCTCCTGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHPTFES*HLSCLC
Trigger: GCACAGACAGGAGAGGTGGCAGCTTTCAAAGGTTGG...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACGGGGGCTTGGCTAGATaGTTCCCATCAATCACTAGC +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHGGLAR*FPSITS
Trigger: GCTAGTGATTGATGGGAAGCATCTAGCCAAGCCCCC...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAGTTCATCGACAGGACTaGTTTTCTTGGAGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: QFLGFVNSSLLGFPSTAQVHRQD*FSWRWS
Trigger: GGACCACCTCCAAGAAAAGCAGTCCTGTCGATGAAC...TTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp ACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAGTTCATCGACAGGACTaGTTTTCTTGGAGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: TIFRLCEFKFAGLSIYCTVHRQD*FSWRWS
Trigger: GGACCACCTCCAAGAAAAGCAGTCCTGTCGATGAAC...TGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACCTCTCAGCCCTTTTGTaGAGCTGGACACAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHLSALL*SWTQVA
Trigger: TGCAACCTGTGTCCAGCTGCACAAAAGGGCTGAGAG...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTTTCAATACGGGGCAATaGTGTTCCCTGCTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTFNTGQ*CSLLPS
Trigger: TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAA...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACGTTACATACGAATGCTaGTGTTTACTCAGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHVTYEC*CLLRGR
Trigger: TCTACCTCTGAGTAAACAGCAGCATTCGTATGTAAC...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417564.3
CDS-3UTR GCA 90 bp ACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAGGGCTTTCCATCTACTaGACAAAGACTTCCCGAGCT +
Preference number: 4 (lower is better)
Translates to: TIFRLCEFKFAGLSIYCTGLSIY*TKTSRA
Trigger: AGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCC...TGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp TTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGAAAAGAACTCCTTCAGTaGAGGGCGCTTTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: FLGFVNSSLLGFPSTAQRKELLQ*RALWPL
Trigger: AAGAGGCCAAAGCGCCCTCCACTGAAGGAGTTCTTT...TCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGTTAATGGCACTTCTATaGGGACAGGAACCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMLMALL*GQEPAL
Trigger: CAGAGCTGGTTCCTGTCCCCATAGAAGTGCCATTAA...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGAAACCCAACCTGCTaGCTGCCTGCATCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: QFLGFVNSSLLGFPSTAQRNPTC*LPASFL
Trigger: AAGAAAGGATGCAGGCAGCCAGCAGGTTGGGTTTCT...TTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp GAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCATACTGCCTTCTTTGCTaGTTTTATACTCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: EFKFAGLSIYCTKTSRAAYCLLC*FYTQCR
Trigger: CCTACATTGAGTATAAAACCAGCAAAGAAGGCAGTA...TGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATAGATCGACCACGGGTTaGCACCATCGGCCACAATCA +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYRSTTG*HHRPQS
Trigger: TGATTGTGGCCGATGGTGCCAACCCGTGGTCGATCT...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACTGCTTTTCTTGGAGGTaGTCCTCCCAGATCAGGTGG +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHCFSWR*SSQIRW
Trigger: CCACCTGATCTGGGAGGACCACCTCCAAGAAAAGCA...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TGTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACCAGGACTGCTTTTCTTaGAGGTGGTCCTCCCAGATC +
Preference number: 4 (lower is better)
Translates to: CTTIFRLCEFKFAGLSIYQDCFS*RWSSQI
Trigger: GATCTGGGAGGACCACCTCCAAGAAAAGCAGTCCTG...GTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACGCCCTTTTGTGCAGCTaGACACAGGTTGCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHALLCS*TQVAVL
Trigger: AAGCACTGCAACCTGTGTCCAGCTGCACAAAAGGGC...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTGCCCTTTTGTGCAGCTaGACACAGGTTGCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTALLCS*TQVAVL
Trigger: AAGCACTGCAACCTGTGTCCAGCTGCACAAAAGGGC...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGCACAGTCCAACACCATaGGGAAACAGGGCTACTATG +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWHSPTP*GNRATM
Trigger: CATAGTAGCCCTGTTTCCCCATGGTGTTGGACTGTG...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCCCCTCAGGCTTTGGCTaGTTTGGATCTTCCAACAAT +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVPSGFG*FGSSNN
Trigger: ATTGTTGGAAGATCCAAATCAGCCAAAGCCTGAGGG...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400274.5
CDS-3UTR GCA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTAGGAATTCTATTCTCTaGTTGCAGAGATGGGTCTAT +
Preference number: 4 (lower is better)
Translates to: AQLARLMCGELITALLGTRNSIL*LQRWVY
Trigger: ATAGACCCATCTCTGCAAGCAGAGAATAGAATTCCT...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAAGGAATTCTATTCTCTaGTTGCAGAGATGGGTCTAT +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLRNSIL*LQRWVY
Trigger: ATAGACCCATCTCTGCAAGCAGAGAATAGAATTCCT...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATTTGGCCAAAGCTGCTTaGACGGCTTCAGTGTGGACA +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYLAKAA*TASVWT
Trigger: TGTCCACACTGAAGCCGTGCAAGCAGCTTTGGCCAA...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCGTTTCCACAGACGAATaGACAAGGACAGAACGTCTC +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVVSTDE*TRTERL
Trigger: GAGACGTTCTGTCCTTGTGCATTCGTCTGTGGAAAC...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATTCAGGAGGGGCAGAATaGAGATCTATGTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYSGGAE*RSMWVW
Trigger: CCACACCCACATAGATCTGCATTCTGCCCCTCCTGA...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTGACAGGAACCAGCTCTaGCAGGAGACACCCATAAAA +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTDRNQL*QETPIK
Trigger: TTTTATGGGTGTCTCCTGGCAGAGCTGGTTCCTGTC...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TGTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACGACAGGAACCAGCTCTaGCAGGAGACACCCATAAAA +
Preference number: 4 (lower is better)
Translates to: CTTIFRLCEFKFAGLSIYDRNQL*QETPIK
Trigger: TTTTATGGGTGTCTCCTGGCAGAGCTGGTTCCTGTC...GTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTCTTGTTAACACGCCATaGCACAGACCAGCATCCCTT +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTLVNTP*HRPASL
Trigger: AAGGGATGCTGGTCTGTGGCATGGCGTGTTAACAAG...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTGTTCATCGACAGGACTaGTTTTCTTGGAGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTVHRQD*FSWRWS
Trigger: GGACCACCTCCAAGAAAAGCAGTCCTGTCGATGAAC...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGGAAACAGGGCTACTATaGACAGTGCTATTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMETGLL*TVLFVA
Trigger: GGCTACAAATAGCACTGTGCATAGTAGCCCTGTTTC...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTAAAGAACTCCTTCAGTaGAGGGCGCTTTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTKELLQ*RALWPL
Trigger: AAGAGGCCAAAGCGCCCTCCACTGAAGGAGTTCTTT...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCGCTTCCCTCAGGCTTTaGCTGATTTGGATCTTCCAA +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVASLRL*LIWIFQ
Trigger: TTGGAAGATCCAAATCAGCCAAAGCCTGAGGGAAGC...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400274.5
CDS-3UTR CCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTAGAAACCCAACCTGCTaGCTGCCTGCATCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTRNPTC*LPASFL
Trigger: AAGAAAGGATGCAGGCAGCCAGCAGGTTGGGTTTCT...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATTGCTTTTCTTGGAGGTaGTCCTCCCAGATCAGGTGG +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYCFSWR*SSQIRW
Trigger: CCACCTGATCTGGGAGGACCACCTCCAAGAAAAGCA...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTCAGTTGCACTGGAACTaGCGCATATTTCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTQLHWN*RIFLPL
Trigger: AAGTGGGAGAAATATGCGTCAGTTCCAGTGCAACTG...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATAGATGCGGGGATTGTTaGGAGGGATCTGTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYRCGDC*EGSVRA
Trigger: TGCTCTTACAGATCCCTCTCAACAATCCCCGCATCT...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCCTTATTGAGTGTCCGTaGCAATACATGCTGACAAGC +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVLIECP*QYMLTS
Trigger: GCTTGTCAGCATGTATTGTCACGGACACTCAATAAG...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACTTTGGATCTGGTTGCTaGACTTCCAACAATTCCTCA +
Preference number: 4 (lower is better)
Translates to: SRLILEKPGCFCEACMIHFGSGC*TSNNSS
Trigger: TGAGGAATTGTTGGAAGTTCAGCAACCAGATCCAAA...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTAAGCGGTATATAACGTaGAAGCAGCTTTGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: FRLCEFKFAGLSIYCTKTKRYIT*KQLCPF
Trigger: AAAAGGGCAAAGCTGCTTGCACGTTATATACCGCTT...AGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACTTTTGGAGGACACTCTaGTGTTCACAGGGACACCAT +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHFWRTL*CSQGHH
Trigger: ATGGTGTCCCTGTGAACAGCAGAGTGTCCTCCAAAA...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGTTCATCGACAGGACTaGTTTTCTTGGAGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYVHRQD*FSWRWS
Trigger: GGACCACCTCCAAGAAAAGCAGTCCTGTCGATGAAC...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGTACGCTGTGCCAGTTaGACTGGAACTGACGCATAT +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYVRCAS*TGTDAY
Trigger: ATATGCGTCAGTTCCAGTGCAACTGGCACAGCGTAC...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCAGAACACAGCGATCCTaGCTCTGTAGACAAACTTCA +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVRTQRS*LCRQTS
Trigger: TGAAGTTTGTCTACAGAGGCAGGATCGCTGTGTTCT...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATCACAGAAGCCACCTGTaGACGCTCAAAGTACGAATG +
Preference number: 4 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYHRSHL*TLKVRM
Trigger: CATTCGTACTTTGAGCGTCCACAGGTGGCTTCTGTG...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp AGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCTACTGCCTTCTTTGCTaGTTTTATACTCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: RLCEFKFAGLSIYCTKTSYCLLC*FYTQCR
Trigger: CCTACATTGAGTATAAAACCAGCAAAGAAGGCAGTA...GGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp TGTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACAAAGTTTACCATAGGTaGGAGTGTAGACGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: CTTIFRLCEFKFAGLSIYKVYHR*ECRRLS
Trigger: GGAAAGCCGTCTACACTCTCACCTATGGTAAACTTT...GTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTGACCAGCATCCCTTTTaGAATCCAGCACGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTDQHPF*NPARLL
Trigger: TAACAAACGTGCTGGATTTCAAAAGGGATGCTGGTC...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACCTGAACAGTAAGGACTaGCAACTTTTCTTCAGTATC +
Preference number: 4 (lower is better)
Translates to: SRLILEKPGCFCEACMIHLNSKD*QLFFSI
Trigger: GATACTGAAGAAAAGTTGTCAGTCCTTACTGTTCAG...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGAACGTGCAAGCAGCTTTaGCCTTTTCTTTTCATATCC +
Preference number: 4 (lower is better)
Translates to: FLGFVNSSLLGFPSTAQRTCKQL*PFLFIS
Trigger: GGATATGAAAAGAAAAGGGCAAAGCTGCTTGCACGT...TCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGAAGCGGTATATAACGTaGAAGCAGCTTTGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWKRYIT*KQLCPF
Trigger: AAAAGGGCAAAGCTGCTTGCACGTTATATACCGCTT...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAGAGACACCCATAAAATaGAACCATGAACATCACAGG +
Preference number: 4 (lower is better)
Translates to: QFLGFVNSSLLGFPSTAQETPIK*NHEHHR
Trigger: CCTGTGATGTTCATGGTTGCATTTTATGGGTGTCTC...TTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR GCA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTATGTTTCTGTGAAGCATaGATGATTCACAAAATTTGC +
Preference number: 4 (lower is better)
Translates to: ELAQLARLMCGELITALLCFCEA*MIHKIC
Trigger: GCAAATTTTGTGAATCATGCATGCTTCACAGAAACA...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAATGGCTGATTTGGATCTaGTTGCTGAACTTCCAACAA +
Preference number: 4 (lower is better)
Translates to: QFLGFVNSSLLGFPSTAQWLIWI*LLNFQQ
Trigger: TTGTTGGAAGTTCAGCAACCAGATCCAAATCAGCCA...TTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCCTGAACAGTAAGGACTaGCAACTTTTCTTCAGTATC +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVLNSKD*QLFFSI
Trigger: GATACTGAAGAAAAGTTGTCAGTCCTTACTGTTCAG...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGCAAACACATTCTTCGTaGTTCCAAGCAATCCATAGT +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWQTHSS*FQAIHS
Trigger: ACTATGGATTGCTTGGAATCACGAAGAATGTGTTTG...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAACAAACACATTCTTCGTaGTTCCAAGCAATCCATAGT +
Preference number: 4 (lower is better)
Translates to: QFLGFVNSSLLGFPSTAQQTHSS*FQAIHS
Trigger: ACTATGGATTGCTTGGAATCACGAAGAATGTGTTTG...TTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR TCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCCAAAATGGCACTTATTaGGTGTCCGTGACAATACAT +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVQNGTY*VSVTIH
Trigger: ATGTATTGTCACGGACACTCAATAAGTGCCATTTTG...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACTCTGTGAAGCATGCATaGTTCACAAAATTTGCCACC +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHSVKHA*FTKFAT
Trigger: GGTGGCAAATTTTGTGAATCATGCATGCTTCACAGA...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTAGCTTTGTTAGGCACTaGTCCAGACTAATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTSFVRH*SRLILE
Trigger: TTCCAGAATTAGTCTGGATCAGTGCCTAACAAAGCT...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR TCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTTTTGGATCTGGTTGCTaGACTTCCAACAATTCCTCA +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTFGSGC*TSNNSS
Trigger: TGAGGAATTGTTGGAAGTTCAGCAACCAGATCCAAA...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACAAGCGGTATATAACGTaGAAGCAGCTTTGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHKRYIT*KQLCPF
Trigger: AAAAGGGCAAAGCTGCTTGCACGTTATATACCGCTT...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp TTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGAAGGAATTCTATTCTCTaGTTGCAGAGATGGGTCTAT +
Preference number: 4 (lower is better)
Translates to: FLGFVNSSLLGFPSTAQRRNSIL*LQRWVY
Trigger: ATAGACCCATCTCTGCAAGCAGAGAATAGAATTCCT...TCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGTTTGACAGTCCAAAATaGCACTTATTGAGTGTCCGT +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWFDSPK*HLLSVR
Trigger: ACGGACACTCAATAAGTGCCATTTTGGACTGTCAAA...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTTGGCTGATTTGGATCTaGTTGCTGAACTTCCAACAA +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTWLIWI*LLNFQQ
Trigger: TTGTTGGAAGTTCAGCAACCAGATCCAAATCAGCCA...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACATTCTATTCTCTGCTTaGAGAGATGGGTCTATTCCT +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHILFSA*RDGSIP
Trigger: AGGAATAGACCCATCTCTGCAAGCAGAGAATAGAAT...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACAGGAATTCTATTCTCTaGTTGCAGAGATGGGTCTAT +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHRNSIL*LQRWVY
Trigger: ATAGACCCATCTCTGCAAGCAGAGAATAGAATTCCT...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACTTTGACAGTCCAAAATaGCACTTATTGAGTGTCCGT +
Preference number: 4 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHFDSPK*HLLSVR
Trigger: ACGGACACTCAATAAGTGCCATTTTGGACTGTCAAA...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGAGCCAGACTCATGTGTaGAGAATTAATAACAGCTTT +
Preference number: 4 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWSQTHV*RINNSF
Trigger: AAAGCTGTTATTAATTCTCCACACATGAGTCTGGCT...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CCA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCAGCCAGACTCATGTGTaGAGAATTAATAACAGCTTT +
Preference number: 4 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVSQTHV*RINNSF
Trigger: AAAGCTGTTATTAATTCTCCACACATGAGTCTGGCT...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR GCA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTATGATTCACAAAATTTaGCACCCTCAATACCCCAAA +
Preference number: 4 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTMIHKI*HPQYPK
Trigger: TTTGGGGTATTGAGGGTGGCAAATTTTGTGAATCAT...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS CCA 90 bp CGGCAGGCAGCGGCGCCGCCTCCAGCGGGCACCCGCGGTCAGCCATaGCCAGGCCGGCTAGCGTCCGGGCAGAGGCTGGAACCGGACCGG +
Preference number: 5 (lower is better)
Translates to: RQAAAPPPAGTRGQP*PGRLASGQRLEPDR
Trigger: CCGGTCCGGTTCCAGCCTCTGCCCGGACGCTAGCCGGCCTGGCCATGGCTGACCGCGGGTGCCCGCTGGAGGCGGCGCCGCTGCCTGCCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS CCA 90 bp CCAGGCCGGCTAGCGTCCGGGCAGAGGCTGGAACCGGACCGGGCCTaGCGGCGGCAGCGCAAACCTCGGCTACGTAGCTCCCCTCAGGCC +
Preference number: 5 (lower is better)
Translates to: PGRLASGQRLEPDRA*RRQRKPRLRSSPQA
Trigger: GGCCTGAGGGGAGCTACGTAGCCGAGGTTTGCGCTGCCGCCGCCAGGCCCGGTCCGGTTCCAGCCTCTGCCCGGACGCTAGCCGGCCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS GCA 90 bp GTTCACAGGGACACCTATGTGGGTGTGGGCCTCGAGGCCTGCGAGTaGAGTGGTAGCGGCGGCCCCCGGCGTGGCTGCAGCACTGGGAGC +
Preference number: 5 (lower is better)
Translates to: VHRDTYVGVGLEACE*SGSGGPRRGCSTGS
Trigger: GCTCCCAGTGCTGCAGCCACGCCGGGGGCCGCCGCTACCACTGCACTCGCAGGCCTCGAGGCCCACACCCACATAGGTGTCCCTGTGAAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466639.5
CDS GCA 90 bp GGCAGAATGCAGATCTATGTGGGTGTGGGCCTCGAGGCCTGCGAGTaGAGTGGTAGCGGCGGCCCCCGGCGTGGCTGCAGCACTGGGAGC +
Preference number: 5 (lower is better)
Translates to: GRMQIYVGVGLEACE*SGSGGPRRGCSTGS
Trigger: GCTCCCAGTGCTGCAGCCACGCCGGGGGCCGCCGCTACCACTGCACTCGCAGGCCTCGAGGCCCACACCCACATAGATCTGCATTCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000651436.1
CDS GCA 90 bp AGGAGGGGCAGAATGCAGATCTATGTGGGTGTGGGCCTCGAGGCCTaGGAGTGCAGTGGTAGCGGCGGCCCCCGGCGTGGCTGCAGCACT +
Preference number: 5 (lower is better)
Translates to: RRGRMQIYVGVGLEA*ECSGSGGPRRGCST
Trigger: AGTGCTGCAGCCACGCCGGGGGCCGCCGCTACCACTGCACTCGCAGGCCTCGAGGCCCACACCCACATAGATCTGCATTCTGCCCCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000651436.1
CDS GCA 90 bp CCAGCGCTGCAAGGTGGCCAACAGCGACGGCGGTCGGGGGACACCTaGAGTGAGAGGCTCCCCTCTCAGCACACTCGTCTCGCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: PALQGGQQRRRSGDT*SERLPSQHTRLASL
Trigger: GAGGGAAGCGAGACGAGTGTGCTGAGAGGGGAGCCTCTCACTGCAGGTGTCCCCCGACCGCCGTCGCTGTTGGCCACCTTGCAGCGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS TCA 90 bp GCTGCAAGGTGGCCAACAGCGACGGCGGTCGGGGGACACCTGCAGTaGGAGGCTCCCCTCTCAGCACACTCGTCTCGCTTCCCTCAGGCT +
Preference number: 5 (lower is better)
Translates to: AARWPTATAVGGHLQ*EAPLSAHSSRFPQA
Trigger: AGCCTGAGGGAAGCGAGACGAGTGTGCTGAGAGGGGAGCCTCTCACTGCAGGTGTCCCCCGACCGCCGTCGCTGTTGGCCACCTTGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS TCA 90 bp CGAGCCAGGGCTCGACGCTGGAATGGCTCTGGAGCGGAGTGGAGGTaGGTCGCCCGGGTCGCCGTAAAGAGCCCTCATCTTCTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: RARARRWNGSGAEWR*VARVAVKSPHLLRQ
Trigger: CTGCCTCAGAAGATGAGGGCTCTTTACGGCGACCCGGGCGACTCACCTCCACTCCGCTCCAGAGCCATTCCAGCGTCGAGCCCTGGCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS TCA 90 bp GTGCACCAGTCTCGGAGGTGTGGATGGCCCTGCACACAGGTAGGGTaGTGGGCAGGGAGGTCAGCGCCACCGACCAAGGCCACATGGGAG +
Preference number: 5 (lower is better)
Translates to: VHQSRRCGWPCTQVG*WAGRSAPPTKATWE
Trigger: CTCCCATGTGGCCTTGGTCGGTGGCGCTGACCTCCCTGCCCATCACCCTACCTGTGTGCAGGGCCATCCACACCTCCGAGACTGGTGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494435.5
CDS GCA 90 bp AGGGACACCCCAACCACGCTGCGGTCCCAAGTGCCGCCACCCGCATaGACTCGCCACCCACCCCATGTGCTCACAGCAGCTCACTCTACA +
Preference number: 5 (lower is better)
Translates to: RDTPTTLRSQVPPPA*TRHPPHVLTAAHST
Trigger: TGTAGAGTGAGCTGCTGTGAGCACATGGGGTGGGTGGCGAGTGCATGCGGGTGGCGGCACTTGGGACCGCAGCGTGGTTGGGGTGTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478105.5
CDS GCA 90 bp GACCGGAAGCGCTCATCCCTCGAGGCGGTGGGCCGAGACTTCTGCTaGTTGGGTGCAGCGGCCGTGGTTTGTGAGGGCCCAGGAATTCTA +
Preference number: 5 (lower is better)
Translates to: DRKRSSLEAVGRDFC*LGAAAVVCEGPGIL
Trigger: TAGAATTCCTGGGCCCTCACAAACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCCCACCGCCTCGAGGGATGAGCGCTTCCGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS GCA 90 bp TCTGACCGGAAGCGCTCATCCCTCGAGGCGGTGGGCCGAGACTTCTaGTGCTTGGGTGCAGCGGCCGTGGTTTGTGAGGGCCCAGGAATT +
Preference number: 5 (lower is better)
Translates to: SDRKRSSLEAVGRDF*CLGAAAVVCEGPGI
Trigger: AATTCCTGGGCCCTCACAAACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCCCACCGCCTCGAGGGATGAGCGCTTCCGGTCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS GCA 90 bp GCCAGCAGGGAAGGGGTGGCTGGACATGCTCAAGTTAGCGCAGCCTaGGGCCATCGGAACCACAGGGCTGCATCAGCAGAAGGAAGGGGC +
Preference number: 5 (lower is better)
Translates to: ASREGVAGHAQVSAA*GHRNHRAASAEGRG
Trigger: GCCCCTTCCTTCTGCTGATGCAGCCCTGTGGTTCCGATGGCCGCAGGCTGCGCTAACTTGAGCATGTCCAGCCACCCCTTCCCTGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480553.1
CDS CCA 90 bp GTGCTTGTGACGGTGCCCTTGGCGTTCAGCAGCAAGAACAGCGGGTaGTCAGGAGTGGTGTGGGCACGCCACTGCAGCACGTCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: VLVTVPLAFSSKNSG*SGVVWARHCSTSAR
Trigger: CCTGGCTGACGTGCTGCAGTGGCGTGCCCACACCACTCCTGACCACCCGCTGTTCTTGCTGCTGAACGCCAAGGGCACCGTCACAAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS CCA 90 bp ACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCCAGCTTaGGAGATTCACCGAACCATAGGCCGTGCCGGGGCGCCCACCTGC +
Preference number: 5 (lower is better)
Translates to: TSQPLGTWSGVGVPA*EIHRTIGRAGAPTC
Trigger: GCAGGTGGGCGCCCCGGCACGGCCTATGGTTCGGTGAATCTCCCAAGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS CCA 90 bp CCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTaGAGTGGGGGTGCCAGCTTGGGAGATTCACCGAACCATAGGCCG +
Preference number: 5 (lower is better)
Translates to: PGRTGRDKPTTWHLE*SGGASLGDSPNHRP
Trigger: CGGCCTATGGTTCGGTGAATCTCCCAAGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS CCA 90 bp ATGGGAAGAGGCACTGGAGAGGAGGTGCACACTCTGACTCCACCATaGGGACCACGGAGTGGCGGTGCGCCTGGGGTGGAGACGCAGAGA +
Preference number: 5 (lower is better)
Translates to: MGRGTGEEVHTLTPP*GPRSGGAPGVETQR
Trigger: TCTCTGCGTCTCCACCCCAGGCGCACCGCCACTCCGTGGTCCCCATGGTGGAGTCAGAGTGTGCACCTCCTCTCCAGTGCCTCTTCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480553.1
CDS CCA 90 bp CCGACTCAGGCCTGTGTGCAGGACTGTGCACCAGTCTCGGAGGTGTaGATGGCCCTGCACACAGGTAGGGTGATGGGCAGGGAGGTCAGC +
Preference number: 5 (lower is better)
Translates to: PTQACVQDCAPVSEV*MALHTGRVMGREVS
Trigger: GCTGACCTCCCTGCCCATCACCCTACCTGTGTGCAGGGCCATCCACACCTCCGAGACTGGTGCACAGTCCTGCACACAGGCCTGAGTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494435.5
CDS-3UTR CAA 90 bp CCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCCAGCTAGCGGGGGCCAACCTTaGAAAGCTGCCACCTCTCCT +
Preference number: 5 (lower is better)
Translates to: PGGTSQPLGTWSGVGVPASGGQP*KAATSP
Trigger: AGGAGAGGTGGCAGCTTTCAAAGGTTGGCCCCCGCT...AGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS TCA 90 bp ATCAGCATGCGCAGTGAGCTGAGGCTGACGTCCCTCTGGCCCCGCTaGGCTAGGAGAGACCAGTGCATGTCTCGCGACTTCACCAGCGCG +
Preference number: 5 (lower is better)
Translates to: ISMRSELRLTSLWPR*ARRDQCMSRDFTSA
Trigger: CGCGCTGGTGAAGTCGCGAGACATGCACTGGTCTCTCCTAGCTCAGCGGGGCCAGAGGGACGTCAGCCTCAGCTCACTGCGCATGCTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS CCA 90 bp CTTCAGTGTGGACATCTGACCGGAAGCGCTCATCCCTCGAGGCGGTaGGCCGAGACTTCTGCTGCTTGGGTGCAGCGGCCGTGGTTTGTG +
Preference number: 5 (lower is better)
Translates to: LQCGHLTGSAHPSRR*AETSAAWVQRPWFV
Trigger: CACAAACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCCCACCGCCTCGAGGGATGAGCGCTTCCGGTCAGATGTCCACACTGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS CCA 90 bp CAGTCCCTGTGTCCTGGGCCAGAGGGTGCCAGTCCTTTGGGGGCTTaGCTAGATGCTTCCCATCAATCACTAGCCAGGAGAGCGGGGGCC +
Preference number: 5 (lower is better)
Translates to: QSLCPGPEGASPLGA*LDASHQSLARRAGA
Trigger: GGCCCCCGCTCTCCTGGCTAGTGATTGATGGGAAGCATCTAGCCAAGCCCCCAAAGGACTGGCACCCTCTGGCCCAGGACACAGGGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS CCA 90 bp ACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTaGCACTTGGAGTGGAGTGGGGGTGCCAGCTTGGGAGATTCACCG +
Preference number: 5 (lower is better)
Translates to: TKLEPGRTGRDKPTT*HLEWSGGASLGDSP
Trigger: CGGTGAATCTCCCAAGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS CCA 90 bp GCGAGAGGGAAGGCTCGTGAGGCTCCGCCCGCCCACCCAGCACCCTaGGCACTCCACTCTTCCCTTCCTCAAGAACACTTCTTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: ARGKAREAPPAHPAP*ALHSSLPQEHFFSS
Trigger: GCTGGAAAAGAAGTGTTCTTGAGGAAGGGAAGAGTGGAGTGCCCAGGGTGCTGGGTGGGCGGGCGGAGCCTCACGAGCCTTCCCTCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS CCA 90 bp ACCGACCAAGGCCACATGGGAGGTCAGGAACGGCCAGGACAAGGGTaGGGCTGCAACGAGGTGTCCCTTAGCCACACCCCCTACCTTCTC +
Preference number: 5 (lower is better)
Translates to: TDQGHMGGQERPGQG*GCNEVSLSHTPYLL
Trigger: GAGAAGGTAGGGGGTGTGGCTAAGGGACACCTCGTTGCAGCCCCACCCTTGTCCTGGCCGTTCCTGACCTCCCATGTGGCCTTGGTCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494435.5
CDS GCA 90 bp ACGGCAGCAGCAGCCTCCTTGGACCTGAGCAGCCGTGTGACAGCCTaGGTGGTGAGGACGCATGCAGACTTGCTGACCTCCACGATCATC +
Preference number: 5 (lower is better)
Translates to: TAAAASLDLSSRVTA*VVRTHADLLTSTII
Trigger: GATGATCGTGGAGGTCAGCAAGTCTGCATGCGTCCTCACCACGCAGGCTGTCACACGGCTGCTCAGGTCCAAGGAGGCTGCTGCTGCCGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000472364.1
ENST00000651436.1
CDS CCA 90 bp GGAAGCGCTCATCCCTCGAGGCGGTGGGCCGAGACTTCTGCTGCTTaGGTGCAGCGGCCGTGGTTTGTGAGGGCCCAGGAATTCTATTCT +
Preference number: 5 (lower is better)
Translates to: GSAHPSRRWAETSAA*VQRPWFVRAQEFYS
Trigger: AGAATAGAATTCCTGGGCCCTCACAAACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCCCACCGCCTCGAGGGATGAGCGCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS CCA 90 bp GTGAGTGAGCTCTGCGGTGTCTTCCCACATCACACCTTGGACTGCTaGGGCTCATTCATCTCCGGCACCTGGGCCGGTGTGCTGCGCTCA +
Preference number: 5 (lower is better)
Translates to: VSELCGVFPHHTLDC*GSFISGTWAGVLRS
Trigger: TGAGCGCAGCACACCGGCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCAGAGCTCACTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000478105.5
ENST00000479654.1
ENST00000651436.1
CDS CCA 90 bp TGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTaGAGTGGAGTGGGGGTGCCAGCTTGGGAGATTCACCGAACCATA +
Preference number: 5 (lower is better)
Translates to: WSQGGPGGTSQPLGT*SGVGVPAWEIHRTI
Trigger: TATGGTTCGGTGAATCTCCCAAGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CAA 90 bp AGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGGGATTTGGGCTGTGTaGTGCCCCAGCGCTGCAAGG +
Preference number: 5 (lower is better)
Translates to: RLPELQMKESTPGVGVRSGIWAV*CPSAAR
Trigger: CCTTGCAGCGCTGGGGCACAACACAGCCCAAATCCC...GCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp CGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCCAGCTTCTGGACTGGAAGACGTaGAGGAAGGCGTCACAGGAG +
Preference number: 5 (lower is better)
Translates to: RAGQANHLALGVEWGCQLLDWKT*RKASQE
Trigger: CTCCTGTGACGCCTTCCTCAACGTCTTCCAGTCCAG...AAGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CAA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAAAGGTGACGCGGGCCTaGTACTGGCTGACGGCCGAC +
Preference number: 5 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAKVTRA*YWLTAD
Trigger: GTCGGCCGTCAGCCAGTACAAGGCCCGCGTCACCTT...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCATGTCCACGTAGACGGTaGTGGGGTCCGGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: AVSSHITPWTAGAHSSPACPRRR*WGPGQL
Trigger: CAGCTGGCCCGGACCCCACAACCGTCTACGTGGACA...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTAGTGGGGGTGCCAGCTaGGGAGATTCACCGAACCAT +
Preference number: 5 (lower is better)
Translates to: EPGRTGRDKPTTWHLEWSSGGAS*GDSPNH
Trigger: ATGGTTCGGTGAATCTCCCAAGCTGGCACCCCCACT...ACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS GCA 90 bp GTGTCCTGGGCCAGAGGGTGCCAGTCCTTTGGGGGCTTGGCTAGATaGTTCCCATCAATCACTAGCCAGGAGAGCGGGGGCCAACCTTTG +
Preference number: 5 (lower is better)
Translates to: VSWARGCQSFGGLAR*FPSITSQESGGQPL
Trigger: CAAAGGTTGGCCCCCGCTCTCCTGGCTAGTGATTGATGGGAAGCATCTAGCCAAGCCCCCAAAGGACTGGCACCCTCTGGCCCAGGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS GCA 90 bp CTTCCCTTCTCCATCAGAGCCGCGGCCACTCTCTCAGCCCTTTTGTaGAGCTGGACACAGGTTGCAGTGCTTGTGACGGTGCCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: LPFSIRAAATLSALL*SWTQVAVLVTVPLA
Trigger: CGCCAAGGGCACCGTCACAAGCACTGCAACCTGTGTCCAGCTGCACAAAAGGGCTGAGAGAGTGGCCGCGGCTCTGATGGAGAAGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS CCA 90 bp GCTCCCGCTGCACCCCCGAGGAACACTTCTCACAGAAGCCACCTGTaGACGCTCAAAGTACGAATGCTCCACGAGGCCCGTGGTGACATC +
Preference number: 5 (lower is better)
Translates to: APAAPPRNTSHRSHL*TLKVRMLHEARGDI
Trigger: GATGTCACCACGGGCCTCGTGGAGCATTCGTACTTTGAGCGTCCACAGGTGGCTTCTGTGAGAAGTGTTCCTCGGGGGTGCAGCGGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS CCA 90 bp CAGGTTGTCAGGCCCGATGAAGCCCAGCAGGCCTGTCCTGGTGAATaGCCTGTCAAAGATGGGTGCTCCTCCTGTGGTGACCGGAACTGC +
Preference number: 5 (lower is better)
Translates to: QVVRPDEAQQACPGE*PVKDGCSSCGDRNC
Trigger: GCAGTTCCGGTCACCACAGGAGGAGCACCCATCTTTGACAGGCCATTCACCAGGACAGGCCTGCTGGGCTTCATCGGGCCTGACAACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000480553.1
ENST00000651436.1
CDS-3UTR CAA 90 bp ATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACGAGACTTCTGCTGCTaGGGTGCAGCGGCCGTGGTT +
Preference number: 5 (lower is better)
Translates to: INKAGAREDRAGQANHLARDFCC*GAAAVV
Trigger: AACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTCG...TGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CAA 90 bp CAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGGGATTTGGGCTGTGTaGTGCCCCAGCGCTGCAAGG +
Preference number: 5 (lower is better)
Translates to: QINKAGAREDRAGQANHLGIWAV*CPSAAR
Trigger: CCTTGCAGCGCTGGGGCACAACACAGCCCAAATCCC...CAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CAA 90 bp ACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCATCAGCCCGTCCAGTTaGCCCACGATGAAGACCAGG +
Preference number: 5 (lower is better)
Translates to: TSRAANEGIYSRRGGPQRISPSS*PTMKTR
Trigger: CCTGGTCTTCATCGTGGGCAAACTGGACGGGCTGAT...GCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS TCA 90 bp ACAGGTGTGTGCTGCAACAGGAGCCCCTGTGTGACCAGCATCACCTaGGGCTTCCCCAGAGGAGGTACTGAGTCAGACCCTGGACAGTCC +
Preference number: 5 (lower is better)
Translates to: TGVCCNRSPCVTSIT*GFPRGGTESDPGQS
Trigger: GGACTGTCCAGGGTCTGACTCAGTACCTCCTCTGGGGAAGCCTCAGGTGATGCTGGTCACACAGGGGCTCCTGTTGCAGCACACACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480553.1
CDS GCA 90 bp CCCGACCACAGCAAGAATAGCTGTGGACGGGCTCTGGGTTCTGCGTaGTTCATCAAGTTCTCGTGGCCCCATGAGCCAGACACCACTGCC +
Preference number: 5 (lower is better)
Translates to: PDHSKNSCGRALGSA*FIKFSWPHEPDTTA
Trigger: GGCAGTGGTGTCTGGCTCATGGGGCCACGAGAACTTGATGAAGCACGCAGAACCCAGAGCCCGTCCACAGCTATTCTTGCTGTGGTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS CCA 90 bp TCGAGGCGGTGGGCCGAGACTTCTGCTGCTTGGGTGCAGCGGCCGTaGTTTGTGAGGGCCCAGGAATTCTATTCTCTGCTTGCAGAGATG +
Preference number: 5 (lower is better)
Translates to: SRRWAETSAAWVQRP*FVRAQEFYSLLAEM
Trigger: CATCTCTGCAAGCAGAGAATAGAATTCCTGGGCCCTCACAAACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCCCACCGCCTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS CCA 90 bp CCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTaGGCCGGTGTGCTGCGCTCACATGTTGTAGGCGACATAGATGGG +
Preference number: 5 (lower is better)
Translates to: PHHTLDCWGSFISGT*AGVLRSHVVGDIDG
Trigger: CCCATCTATGTCGCCTACAACATGTGAGCGCAGCACACCGGCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000478105.5
ENST00000479654.1
ENST00000651436.1
CDS CCA 90 bp GATCGACCCTGCACAGAGCAACAAGAGTGGAACGCCAGCACTAACTaGGGGGCCAGCAGGGAAGGGGTGGCTGGACATGCTCAAGTTAGC +
Preference number: 5 (lower is better)
Translates to: DRPCTEQQEWNASTN*GASREGVAGHAQVS
Trigger: GCTAACTTGAGCATGTCCAGCCACCCCTTCCCTGCTGGCCCCCCAGTTAGTGCTGGCGTTCCACTCTTGTTGCTCTGTGCAGGGTCGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480553.1
CDS CCA 90 bp ACAACAGTCAGGATGTCAACCTTTCCACAGCACACCTGCCATGAATaGCAGGGACACCCCAACCACGCTGCGGTCCCAAGTGCCGCCACC +
Preference number: 5 (lower is better)
Translates to: TTVRMSTFPQHTCHE*QGHPNHAAVPSAAT
Trigger: GGTGGCGGCACTTGGGACCGCAGCGTGGTTGGGGTGTCCCTGCCATTCATGGCAGGTGTGCTGTGGAAAGGTTGACATCCTGACTGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478105.5
CDS CCA 90 bp GGACAGAACCTGAGATCTGGACTGGGACTCAAAGCCCGCAAGGTCTaGGATCCCACTGCATCCTTAGGGAAAACCCAGCGACCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: GQNLRSGLGLKARKV*DPTASLGKTQRPPA
Trigger: GGCTGGGGGTCGCTGGGTTTTCCCTAAGGATGCAGTGGGATCCCAGACCTTGCGGGCTTTGAGTCCCAGTCCAGATCTCAGGTTCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472364.1
CDS CCA 90 bp CATACTCACAGGCCCGATGAAGCCCAGCAGGCCTGTCCTGGTGAATaGCCTGTCAAAGATGGGTGCTCCTCCTGTGGTGACCGGAACTGC +
Preference number: 5 (lower is better)
Translates to: HTHRPDEAQQACPGE*PVKDGCSSCGDRNC
Trigger: GCAGTTCCGGTCACCACAGGAGGAGCACCCATCTTTGACAGGCCATTCACCAGGACAGGCCTGCTGGGCTTCATCGGGCCTGTGAGTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494435.5
CDS-3UTR CAA 90 bp ATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCAGTCAGACAGGGGGATTaGGGCTGTGTTGTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: INKAGAREDRAGQANHLAVRQGD*GCVVPQ
Trigger: CTGGGGCACAACACAGCCCAAATCCCCCTGTCTGAC...TGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CAA 90 bp AGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGAGACGGCTTTCCCAGTaGTATCCAAGGCAGTCAGAC +
Preference number: 5 (lower is better)
Translates to: SQGGPGGTSQPLGTWSGVRRLSQ*YPRQSD
Trigger: GTCTGACTGCCTTGGATACAACTGGGAAAGCCGTCT...CACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CAA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAAGCGGGGGCCAACCTTaGAAAGCTGCCACCTCTCCT +
Preference number: 5 (lower is better)
Translates to: AVSSHITPWTAGAHSSPASGGQP*KAATSP
Trigger: AGGAGAGGTGGCAGCTTTCAAAGGTTGGCCCCCGCT...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCCTGGACTGGAAGACGTaGAGGAAGGCGTCACAGGAG +
Preference number: 5 (lower is better)
Translates to: RLPELQMKESTPGVGVRSLDWKT*RKASQE
Trigger: CTCCTGTGACGCCTTCCTCAACGTCTTCCAGTCCAG...GCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS TCA 90 bp CCACCTGTGGACGCTCAAAGTACGAATGCTCCACGAGGCCCGTGGTaGCATCAGGAGGGGCAGAATGCAGATCTATGTGGGTGTGGGCCT +
Preference number: 5 (lower is better)
Translates to: PPVDAQSTNAPRGPW*HQEGQNADLCGCGP
Trigger: AGGCCCACACCCACATAGATCTGCATTCTGCCCCTCCTGATGTCACCACGGGCCTCGTGGAGCATTCGTACTTTGAGCGTCCACAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000651436.1
CDS GCA 90 bp TGCTGTTCACAGGGACACCATCTGCTGTTTCCAGCATGCTCCCGCTaGACCCCCGAGGAACACTTCTCACAGAAGCCACCTGTGGACGCT +
Preference number: 5 (lower is better)
Translates to: CCSQGHHLLFPACSR*TPEEHFSQKPPVDA
Trigger: AGCGTCCACAGGTGGCTTCTGTGAGAAGTGTTCCTCGGGGGTGCAGCGGGAGCATGCTGGAAACAGCAGATGGTGTCCCTGTGAACAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS GCA 90 bp GCATCACTAGGGACAGGAAGGTGCTGCATGTGGTGGGAGACAAGCTaGACGGCACTGCAAGGATCAGGTGCAGCAACAGGGGAGTGCCAT +
Preference number: 5 (lower is better)
Translates to: ASLGTGRCCMWWETS*TALQGSGAATGECH
Trigger: ATGGCACTCCCCTGTTGCTGCACCTGATCCTTGCAGTGCCGTGCAGCTTGTCTCCCACCACATGCAGCACCTTCCTGTCCCTAGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480553.1
CDS GCA 90 bp GTGCTCCAAAGGGCAGAAGGGGCATCACTAGGGACAGGAAGGTGCTaGATGTGGTGGGAGACAAGCTGCACGGCACTGCAAGGATCAGGT +
Preference number: 5 (lower is better)
Translates to: VLQRAEGASLGTGRC*MWWETSCTALQGSG
Trigger: ACCTGATCCTTGCAGTGCCGTGCAGCTTGTCTCCCACCACATGCAGCACCTTCCTGTCCCTAGTGATGCCCCTTCTGCCCTTTGGAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480553.1
CDS GCA 90 bp CTGGTGCTCCAAAGGGCAGAAGGGGCATCACTAGGGACAGGAAGGTaGTGCATGTGGTGGGAGACAAGCTGCACGGCACTGCAAGGATCA +
Preference number: 5 (lower is better)
Translates to: LVLQRAEGASLGTGR*CMWWETSCTALQGS
Trigger: TGATCCTTGCAGTGCCGTGCAGCTTGTCTCCCACCACATGCAGCACCTTCCTGTCCCTAGTGATGCCCCTTCTGCCCTTTGGAGCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480553.1
CDS CCA 90 bp AGGGCAGAAGGGGCATCACTAGGGACAGGAAGGTGCTGCATGTGGTaGGAGACAAGCTGCACGGCACTGCAAGGATCAGGTGCAGCAACA +
Preference number: 5 (lower is better)
Translates to: RAEGASLGTGRCCMW*ETSCTALQGSGAAT
Trigger: TGTTGCTGCACCTGATCCTTGCAGTGCCGTGCAGCTTGTCTCCCACCACATGCAGCACCTTCCTGTCCCTAGTGATGCCCCTTCTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480553.1
CDS CCA 90 bp CAAAGGGCAGAAGGGGCATCACTAGGGACAGGAAGGTGCTGCATGTaGTGGGAGACAAGCTGCACGGCACTGCAAGGATCAGGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: QRAEGASLGTGRCCM*WETSCTALQGSGAA
Trigger: TGCTGCACCTGATCCTTGCAGTGCCGTGCAGCTTGTCTCCCACCACATGCAGCACCTTCCTGTCCCTAGTGATGCCCCTTCTGCCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480553.1
CDS-3UTR CAA 90 bp GAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCGGCATCTTCCTCTCTTaGTATTTGGCCAAAGCTGCT +
Preference number: 5 (lower is better)
Translates to: EDRAGQANHLALGVEWGCGIFLS*YLAKAA
Trigger: AGCAGCTTTGGCCAAATACAAAGAGAGGAAGATGCC...GCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CAA 90 bp CAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGTCAGTGGAGGGCGCTTaGGCCTCTTCAGGGTGTTCA +
Preference number: 5 (lower is better)
Translates to: QINKAGAREDRAGQANHLSVEGA*ASSGCS
Trigger: TGAACACCCTGAAGAGGCCAAAGCGCCCTCCACTGA...CAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CAA 90 bp ACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCAGACGGCTTTCCCAGTaGTATCCAAGGCAGTCAGAC +
Preference number: 5 (lower is better)
Translates to: TSRAANEGIYSRRGGPQRRRLSQ*YPRQSD
Trigger: GTCTGACTGCCTTGGATACAACTGGGAAAGCCGTCT...GCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp ACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCACAGGACTGCTTTTCTaGGAGGTGGTCCTCCCAGAT +
Preference number: 5 (lower is better)
Translates to: TSRAANEGIYSRRGGPQRTGLLF*EVVLPD
Trigger: ATCTGGGAGGACCACCTCCAAGAAAAGCAGTCCTGT...GCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp AGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGACAACGTCATCTGCATaGTGTCTGCGAACTCCAGTG +
Preference number: 5 (lower is better)
Translates to: SQGGPGGTSQPLGTWSGVTTSSA*CLRTPV
Trigger: CACTGGAGTTCGCAGACACAATGCAGATGACGTTGT...CACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CAA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCAAGGTGACGCGGGCCTaGTACTGGCTGACGGCCGAC +
Preference number: 5 (lower is better)
Translates to: ASTPLSIKELAEEALCVTKVTRA*YWLTAD
Trigger: GTCGGCCGTCAGCCAGTACAAGGCCCGCGTCACCTT...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTAAGGTGACGCGGGCCTaGTACTGGCTGACGGCCGAC +
Preference number: 5 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTKVTRA*YWLTAD
Trigger: GTCGGCCGTCAGCCAGTACAAGGCCCGCGTCACCTT...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTTCCTCCAGCACCACGTaGGTCACCAGGGCCACCAGG +
Preference number: 5 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTSSSTT*VTRATR
Trigger: CCTGGTGGCCCTGGTGACCAACGTGGTGCTGGAGGA...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp CAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGGACAAGCCAACCACTaGGCACTTGGAGTGGAGTGG +
Preference number: 5 (lower is better)
Translates to: QINKAGAREDRAGQANHLGQANH*ALGVEW
Trigger: CCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCC...CAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS TCA 90 bp GGTGGGCCGAGACTTCTGCTGCTTGGGTGCAGCGGCCGTGGTTTGTaGGGGCCCAGGAATTCTATTCTCTGCTTGCAGAGATGGGTCTAT +
Preference number: 5 (lower is better)
Translates to: GGPRLLLLGCSGRGL*GPRNSILCLQRWVY
Trigger: ATAGACCCATCTCTGCAAGCAGAGAATAGAATTCCTGGGCCCTCACAAACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS TCA 90 bp TGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATaGAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCATCACCTG +
Preference number: 5 (lower is better)
Translates to: CWAFHLLHKDFPSCK*RNLLPAWGSAAHHL
Trigger: CAGGTGATGCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435722.7
ENST00000466639.5
ENST00000480553.1
CDS GCA 90 bp TTCACGCCGGGGAGGATCTTTCCAGACTCCATCAATGGCAGGCTGTaGGGAGAACCCCGTTCTACCAAACGAACCCTGTCATGGCGCAGT +
Preference number: 5 (lower is better)
Translates to: FTPGRIFPDSINGRL*GEPRSTKRTLSWRS
Trigger: ACTGCGCCATGACAGGGTTCGTTTGGTAGAACGGGGTTCTCCGCACAGCCTGCCATTGATGGAGTCTGGAAAGATCCTCCCCGGCGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS GCA 90 bp GCGGCTACAAAACGGCACATTAACAACTGGGAAACTGGGTCTCCATaGTGCCAACAGCCAGCTTTCGAGAACCGCAGCCCCAGGCACCTC +
Preference number: 5 (lower is better)
Translates to: AATKRHINNWETGSP*CQQPAFENRSPRHL
Trigger: GAGGTGCCTGGGGCTGCGGTTCTCGAAAGCTGGCTGTTGGCAGCATGGAGACCCAGTTTCCCAGTTGTTAATGTGCCGTTTTGTAGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472364.1
ENST00000481883.1
CDS GCA 90 bp GAGATCTGGACTGGGACTCAAAGCCCGCAAGGTCTGGGATCCCACTaGATCCTTAGGGAAAACCCAGCGACCCCCAGCCTTATCTGCATC +
Preference number: 5 (lower is better)
Translates to: EIWTGTQSPQGLGSH*ILRENPATPSLICI
Trigger: GATGCAGATAAGGCTGGGGGTCGCTGGGTTTTCCCTAAGGATGCAGTGGGATCCCAGACCTTGCGGGCTTTGAGTCCCAGTCCAGATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472364.1
CDS GCA 90 bp GCTTGTGACGGTGCCCTAGGAAAGCGATCTTTGAGCTCATCTGTATaGTGGTGCGTGCAGGTGGGCTGTTCGCAGATCTGCGTGCACACC +
Preference number: 5 (lower is better)
Translates to: ACDGALGKRSLSSSV*WCVQVGCSQICVHT
Trigger: GGTGTGCACGCAGATCTGCGAACAGCCCACCTGCACGCACCAGCATACAGATGAGCTCAAAGATCGCTTTCCTAGGGCACCGTCACAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472364.1
CDS CCA 90 bp CCAGTCCATATGAGTCAGGGCCCCATCAGGACAGAACCTGAGATCTaGACTGGGACTCAAAGCCCGCAAGGTCTGGGATCCCACTGCATC +
Preference number: 5 (lower is better)
Translates to: PVHMSQGPIRTEPEI*TGTQSPQGLGSHCI
Trigger: GATGCAGTGGGATCCCAGACCTTGCGGGCTTTGAGTCCCAGTCCAGATCTCAGGTTCTGTCCTGATGGGGCCCTGACTCATATGGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472364.1
CDS-3UTR CAA 90 bp CAGGGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGAGACCAGCATCCCTTTaGAAATCCAGCACGTTTGTT +
Preference number: 5 (lower is better)
Translates to: QGGPGGTSQPLGTWSGVGRPASL*KSSTFV
Trigger: AACAAACGTGCTGGATTTCAAAAGGGATGCTGGTCT...CCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CAA 90 bp ATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACATCAGCCCGTCCAGTTaGCCCACGATGAAGACCAGG +
Preference number: 5 (lower is better)
Translates to: IQINKAGAREDRAGQANHISPSS*PTMKTR
Trigger: CCTGGTCTTCATCGTGGGCAAACTGGACGGGCTGAT...GTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CAA 90 bp ACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCGCACAACGTCATCTGCATaGTGTCTGCGAACTCCAGTG +
Preference number: 5 (lower is better)
Translates to: TSRAANEGIYSRRGGPQRTTSSA*CLRTPV
Trigger: CACTGGAGTTCGCAGACACAATGCAGATGACGTTGT...GCGCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCCCTCCGAGAGGAGCCTaGGGCAAGGTGTTGGCAGGA +
Preference number: 5 (lower is better)
Translates to: ASTPLSIKELAEEALCVTPPRGA*GKVLAG
Trigger: TCCTGCCAACACCTTGCCCAAGGCTCCTCTCGGAGG...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCGAGGATGGGTCCAGCTaGCTTCCTTTTTCCATCAGC +
Preference number: 5 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGEDGSS*LPFSIS
Trigger: GCTGATGGAAAAAGGAAGCAAGCTGGACCCATCCTC...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS TCA 90 bp CTAATACCTGGTCAACAGGTGTGTGCTGCAACAGGAGCCCCTGTGTaGCCAGCATCACCTGAGGCTTCCCCAGAGGAGGTACTGAGTCAG +
Preference number: 5 (lower is better)
Translates to: LIPGQQVCAATGAPV*PASPEASPEEVLSQ
Trigger: CTGACTCAGTACCTCCTCTGGGGAAGCCTCAGGTGATGCTGGTCACACAGGGGCTCCTGTTGCAGCACACACCTGTTGACCAGGTATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480553.1
CDS TCA 90 bp AGCTTTGCCAGTCCATATGAGTCAGGGCCCCATCAGGACAGAACCTaGGATCTGGACTGGGACTCAAAGCCCGCAAGGTCTGGGATCCCA +
Preference number: 5 (lower is better)
Translates to: SFASPYESGPHQDRT*DLDWDSKPARSGIP
Trigger: TGGGATCCCAGACCTTGCGGGCTTTGAGTCCCAGTCCAGATCTCAGGTTCTGTCCTGATGGGGCCCTGACTCATATGGACTGGCAAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472364.1
CDS GCA 90 bp GGAACACTTCTCACAGAAGCCACCTGTGGACGCTCAAAGTACGAATaGTCCACGAGGCCCGTGGTGACATCAGGAGGGGCAGAATGCAGA +
Preference number: 5 (lower is better)
Translates to: GTLLTEATCGRSKYE*STRPVVTSGGAECR
Trigger: TCTGCATTCTGCCCCTCCTGATGTCACCACGGGCCTCGTGGAGCATTCGTACTTTGAGCGTCCACAGGTGGCTTCTGTGAGAAGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000473752.5
ENST00000651436.1
CDS GCA 90 bp GAAGCCCAGCAGGCCTGTCCTGGTGAATGGCCTGTCAAAGATGGGTaGTCCTCCTGTGGTGACCGGAACTGCCTCAAACACATTCTTCGT +
Preference number: 5 (lower is better)
Translates to: EAQQACPGEWPVKDG*SSCGDRNCLKHILR
Trigger: ACGAAGAATGTGTTTGAGGCAGTTCCGGTCACCACAGGAGGAGCACCCATCTTTGACAGGCCATTCACCAGGACAGGCCTGCTGGGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000480553.1
ENST00000494435.5
ENST00000651436.1
CDS GCA 90 bp AGTGAGCTCAGACGGGAGTGGGGCCGTGACGATGCAGGCTGTGCGTaGTCAGGAAAGCGTATTTCATTCTTCATGGAAACGCTACCCGGT +
Preference number: 5 (lower is better)
Translates to: SELRREWGRDDAGCA*SGKRISFFMETLPG
Trigger: ACCGGGTAGCGTTTCCATGAAGAATGAAATACGCTTTCCTGAGCACGCACAGCCTGCATCGTCACGGCCCCACTCCCGTCTGAGCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS GCA 90 bp CCCACTCACACACATCTCATCGGCTTCCTGAGCACCCAGAAAAGGTaGCTTAGAAGGCCAAGGTTCCTAAGAGCCACACGAGCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: PTHTHLIGFLSTQKR*LRRPRFLRATRAAP
Trigger: GGGAGCAGCTCGTGTGGCTCTTAGGAACCTTGGCCTTCTAAGGCACCTTTTCTGGGTGCTCAGGAAGCCGATGAGATGTGTGTGAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS GCA 90 bp GGTCTGTTGACAACAGTCAGGATGTCAACCTTTCCACAGCACACCTaGCATGAATGGCAGGGACACCCCAACCACGCTGCGGTCCCAAGT +
Preference number: 5 (lower is better)
Translates to: GLLTTVRMSTFPQHT*HEWQGHPNHAAVPS
Trigger: ACTTGGGACCGCAGCGTGGTTGGGGTGTCCCTGCCATTCATGGCAGGTGTGCTGTGGAAAGGTTGACATCCTGACTGTTGTCAACAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478105.5
CDS CCA 90 bp AGCGCTGTTTGGTTTCAGAAATGTGAATCCCTCCGAGAGGAGCCTTaGGCAAGGTGTTGGCAGGAACCAGGGCCAGACAGTACACGCCCA +
Preference number: 5 (lower is better)
Translates to: SAVWFQKCESLREEP*ARCWQEPGPDSTRP
Trigger: TGGGCGTGTACTGTCTGGCCCTGGTTCCTGCCAACACCTTGCCCAAGGCTCCTCTCGGAGGGATTCACATTTCTGAAACCAAACAGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GGAGGACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGAATTCTATTCTCTGCTaGCAGAGATGGGTCTATTCC +
Preference number: 5 (lower is better)
Translates to: GGPGGTSQPLGTWSGVGVNSILC*QRWVYS
Trigger: GGAATAGACCCATCTCTGCAAGCAGAGAATAGAATT...CACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CAA 90 bp CCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCCAGCTACCGTACTGCCTTCTTaGCTGGTTTTATACTCAATG +
Preference number: 5 (lower is better)
Translates to: PGGTSQPLGTWSGVGVPATVLPS*LVLYSM
Trigger: CATTGAGTATAAAACCAGCAAAGAAGGCAGTACGGT...AGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CAA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGCCTCCGAGAGGAGCCTaGGGCAAGGTGTTGGCAGGA +
Preference number: 5 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQPPRGA*GKVLAG
Trigger: TCCTGCCAACACCTTGCCCAAGGCTCCTCTCGGAGG...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACATGTCCACGTAGACGGTaGTGGGGTCCGGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: STPLSIKELAEEALCVTTCPRRR*WGPGQL
Trigger: CAGCTGGCCCGGACCCCACAACCGTCTACGTGGACA...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp CGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCCAGCTTAACGTGCAAGCAGCTTaGCCCTTTTCTTTTCATATC +
Preference number: 5 (lower is better)
Translates to: RAGQANHLALGVEWGCQLNVQAA*PFSFHI
Trigger: GATATGAAAAGAAAAGGGCAAAGCTGCTTGCACGTT...AAGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CAA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGGTCAGACAGGGGGATTaGGGCTGTGTTGTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQVRQGD*GCVVPQ
Trigger: CTGGGGCACAACACAGCCCAAATCCCCCTGTCTGAC...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp ATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCGAGATCGACCACGGGTaGGCACCATCGGCCACAATC +
Preference number: 5 (lower is better)
Translates to: MKNTDKQSWSQGGPGGTSEIDHG*APSATI
Trigger: GATTGTGGCCGATGGTGCCAACCCGTGGTCGATCTC...GCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CAA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACGAGATCGACCACGGGTaGGCACCATCGGCCACAATC +
Preference number: 5 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHEIDHG*APSATI
Trigger: GATTGTGGCCGATGGTGCCAACCCGTGGTCGATCTC...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCCTGGACTGGAAGACGTaGAGGAAGGCGTCACAGGAG +
Preference number: 5 (lower is better)
Translates to: ASTPLSIKELAEEALCVTLDWKT*RKASQE
Trigger: CTCCTGTGACGCCTTCCTCAACGTCTTCCAGTCCAG...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACCCTCCGAGAGGAGCCTaGGGCAAGGTGTTGGCAGGA +
Preference number: 5 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHPPRGA*GKVLAG
Trigger: TCCTGCCAACACCTTGCCCAAGGCTCCTCTCGGAGG...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCGGTTCCCCACGATCATaGAGGCTGGTCCAACCTCTG +
Preference number: 5 (lower is better)
Translates to: ASTPLSIKELAEEALCVTGSPRS*RLVQPL
Trigger: CAGAGGTTGGACCAGCCTCAATGATCGTGGGGAACC...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTACCTCCACGATCATCTaGACGGTGGGCAGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: KEMRGLLRGICKSTGRASTSTII*TVGSVV
Trigger: CACCACACTGCCCACCGTCAAGATGATCGTGGAGGT...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTACCTCCACGATCATCTaGACGGTGGGCAGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLTSTII*TVGSVV
Trigger: CACCACACTGCCCACCGTCAAGATGATCGTGGAGGT...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTTGTGCGCCTAGGCCCTaGGTGCACATCTCCATCACA +
Preference number: 5 (lower is better)
Translates to: KEMRGLLRGICKSTGRASCAPRP*VHISIT
Trigger: TGTGATGGAGATGTGCACCAAGGGCCTAGGCGCACA...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTTCTCCCAAGGGTCCTTaGGTCTCGGTGTGTGCGATG +
Preference number: 5 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLSPKGP*VSVCAM
Trigger: CATCGCACACACCGAGACCAAAGGACCCTTGGGAGA...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCTCTCCCAAGGGTCCTTaGGTCTCGGTGTGTGCGATG +
Preference number: 5 (lower is better)
Translates to: ASTPLSIKELAEEALCVTSPKGP*VSVCAM
Trigger: CATCGCACACACCGAGACCAAAGGACCCTTGGGAGA...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCGGCATCTTCCTCTCTTaGTATTTGGCCAAAGCTGCT +
Preference number: 5 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGGIFLS*YLAKAA
Trigger: AGCAGCTTTGGCCAAATACAAAGAGAGGAAGATGCC...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCATCAGTGGAGGGCGCTTaGGCCTCTTCAGGGTGTTCA +
Preference number: 5 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSSVEGA*ASSGCS
Trigger: TGAACACCCTGAAGAGGCCAAAGCGCCCTCCACTGA...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTCAGTCCTTTGGGGGCTaGGCTAGATGCTTCCCATCA +
Preference number: 5 (lower is better)
Translates to: KEMRGLLRGICKSTGRASQSFGG*ARCFPS
Trigger: TGATGGGAAGCATCTAGCCAAGCCCCCAAAGGACTG...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGCTGGACTGGAAGACGTaGAGGAAGGCGTCACAGGAG +
Preference number: 5 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQLDWKT*RKASQE
Trigger: CTCCTGTGACGCCTTCCTCAACGTCTTCCAGTCCAG...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACATCAGCCCGTCCAGTTaGCCCACGATGAAGACCAGG +
Preference number: 5 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHISPSS*PTMKTR
Trigger: CCTGGTCTTCATCGTGGGCAAACTGGACGGGCTGAT...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGCTTGTGACGGTGCCCTaGGCGTTCAGCAGCAAGAAC +
Preference number: 5 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQLVTVP*AFSSKN
Trigger: GTTCTTGCTGCTGAACGCCAAGGGCACCGTCACAAG...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCACTTGTGACGGTGCCCTaGGCGTTCAGCAGCAAGAAC +
Preference number: 5 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSLVTVP*AFSSKN
Trigger: GTTCTTGCTGCTGAACGCCAAGGGCACCGTCACAAG...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp CCTCCCTGTGAAACAGAAGTGAGGCAGCTGGTTTGTACTCTGCTATCTTCCCAGTGTGCGCCTAGGCCCTaGGTGCACATCTCCATCACA +
Preference number: 5 (lower is better)
Translates to: PPCETEVRQLVCTLLSSQCAPRP*VHISIT
Trigger: TGTGATGGAGATGTGCACCAAGGGCCTAGGCGCACA...CTGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACTTCTGTTTCACAGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTCCTCCAGCACCACGTaGGTCACCAGGGCCACCAGG +
Preference number: 5 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHSSSTT*VTRATR
Trigger: CCTGGTGGCCCTGGTGACCAACGTGGTGCTGGAGGA...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTTTCCCACATCACACCTaGGACTGCTGGGGCTCATTC +
Preference number: 5 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLFPHHT*DCWGSF
Trigger: GAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAA...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS TCA 90 bp ATGTATTCTGAACGCTCTGGGCTTTCACAGGCAAGAGGCGACACATaGTTTGTCCTTGGGAGTCCTGCAGAGAGTGAGCTCAGACGGGAG +
Preference number: 5 (lower is better)
Translates to: MYSERSGLSQARGDT*FVLGSPAESELRRE
Trigger: CTCCCGTCTGAGCTCACTCTCTGCAGGACTCCCAAGGACAAATCATGTGTCGCCTCTTGCCTGTGAAAGCCCAGAGCGTTCAGAATACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS GCA 90 bp GAAGGCATAGGCATCTTCCTCTCTTTGTATTTGGCCAAAGCTGCTTaGACGGCTTCAGTGTGGACATCTGACCGGAAGCGCTCATCCCTC +
Preference number: 5 (lower is better)
Translates to: EGIGIFLSLYLAKAA*TASVWTSDRKRSSL
Trigger: GAGGGATGAGCGCTTCCGGTCAGATGTCCACACTGAAGCCGTGCAAGCAGCTTTGGCCAAATACAAAGAGAGGAAGATGCCTATGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS GCA 90 bp GCAAACATCCCTGAATTGTACTACTTTCCATGCCCACAGGTCACCTaGACTGAGCCTGGGCGTGTGTCATCTGCAACCGGCTTTCTCAGA +
Preference number: 5 (lower is better)
Translates to: ANIPELYYFPCPQVT*TEPGRVSSATGFLR
Trigger: TCTGAGAAAGCCGGTTGCAGATGACACACGCCCAGGCTCAGTGCAGGTGACCTGTGGGCATGGAAAGTAGTACAATTCAGGGATGTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472364.1
CDS-3UTR CAA 90 bp CTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTGGGCAACGTGCAAGCAGCTTaGCCCTTTTCTTTTCATATC +
Preference number: 5 (lower is better)
Translates to: LPTSHLGLLGLIHLRHLGNVQAA*PFSFHI
Trigger: GATATGAAAAGAAAAGGGCAAAGCTGCTTGCACGTT...GCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp TTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATCGAGACTTCTGCTGCTaGGGTGCAGCGGCCGTGGTT +
Preference number: 5 (lower is better)
Translates to: FKFAGLSIYCTKTSRAANRDFCC*GAAAVV
Trigger: AACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTCG...ATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp ACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGTTCCTCTCTTTGTATTaGGCCAAAGCTGCTTGCACG +
Preference number: 5 (lower is better)
Translates to: TKTSRAANEGIYSRRGGPFLSLY*AKAACT
Trigger: CGTGCAAGCAGCTTTGGCCAAATACAAAGAGAGGAA...CGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTGGGATTTGGGCTGTGTaGTGCCCCAGCGCTGCAAGG +
Preference number: 5 (lower is better)
Translates to: VCHNILYHSPTPWGNRATGIWAV*CPSAAR
Trigger: CCTTGCAGCGCTGGGGCACAACACAGCCCAAATCCC...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp TGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGGGATTTGGGCTGTGTaGTGCCCCAGCGCTGCAAGG +
Preference number: 5 (lower is better)
Translates to: CEFKFAGLSIYCTKTSRAGIWAV*CPSAAR
Trigger: CCTTGCAGCGCTGGGGCACAACACAGCCCAAATCCC...AGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp CTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTAGCGGGGGCCAACCTTaGAAAGCTGCCACCTCTCCT +
Preference number: 5 (lower is better)
Translates to: LGFPSTAQRLPELQMKESSGGQP*KAATSP
Trigger: AGGAGAGGTGGCAGCTTTCAAAGGTTGGCCCCCGCT...AGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp AGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCACCGTACTGCCTTCTTaGCTGGTTTTATACTCAATG +
Preference number: 5 (lower is better)
Translates to: RLPELQMKESTPGVGVRSTVLPS*LVLYSM
Trigger: CATTGAGTATAAAACCAGCAAAGAAGGCAGTACGGT...GCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTACAGGACTGCTTTTCTaGGAGGTGGTCCTCCCAGAT +
Preference number: 5 (lower is better)
Translates to: KEMRGLLRGICKSTGRASTGLLF*EVVLPD
Trigger: ATCTGGGAGGACCACCTCCAAGAAAAGCAGTCCTGT...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACATCAGCCCGTCCAGTTaGCCCACGATGAAGACCAGG +
Preference number: 5 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHISPSS*PTMKTR
Trigger: CCTGGTCTTCATCGTGGGCAAACTGGACGGGCTGAT...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTACTCTCTCAGCCCTTTaGTGCAGCTGGACACAGGTT +
Preference number: 5 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLTLSAL*CSWTQV
Trigger: AACCTGTGTCCAGCTGCACAAAAGGGCTGAGAGAGT...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAGGACGCATGCAGACTaGCTGACCTCCACGATCATC +
Preference number: 5 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHRTHAD*LTSTII
Trigger: GATGATCGTGGAGGTCAGCAAGTCTGCATGCGTCCT...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACTCTCCCAAGGGTCCTTaGGTCTCGGTGTGTGCGATG +
Preference number: 5 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHSPKGP*VSVCAM
Trigger: CATCGCACACACCGAGACCAAAGGACCCTTGGGAGA...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCGAGGATGGGTCCAGCTaGCTTCCTTTTTCCATCAGC +
Preference number: 5 (lower is better)
Translates to: ASTPLSIKELAEEALCVTEDGSS*LPFSIS
Trigger: GCTGATGGAAAAAGGAAGCAAGCTGGACCCATCCTC...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp ACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGGCTTTGGCTGATTaGGATCTGGTTGCTGAACTT +
Preference number: 5 (lower is better)
Translates to: TKTSRAANEGIYSRRGGPQALAD*DLVAEL
Trigger: AAGTTCAGCAACCAGATCCAAATCAGCCAAAGCCTG...CGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS CCA 90 bp GAGAGGCTCCCCTCTCAGCACACTCGTCTCGCTTCCCTCAGGCTTTaGCTGATTTGGATCTGGTTGCTGAACTTCCAACAATTCCTCAAA +
Preference number: 5 (lower is better)
Translates to: ERLPSQHTRLASLRL*LIWIWLLNFQQFLK
Trigger: TTTGAGGAATTGTTGGAAGTTCAGCAACCAGATCCAAATCAGCCAAAGCCTGAGGGAAGCGAGACGAGTGTGCTGAGAGGGGAGCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS CCA 90 bp CTACACCAGCTCCTTCATTCACCCTGTCTCTCTGCTGAGGGGCACTaGGGCTATGTGACCAGTTCAAGGCAAACAGAAATACCTGGTAAC +
Preference number: 5 (lower is better)
Translates to: LHQLLHSPCLSAEGH*GYVTSSRQTEIPGN
Trigger: GTTACCAGGTATTTCTGTTTGCCTTGAACTGGTCACATAGCCCCAGTGCCCCTCAGCAGAGAGACAGGGTGAATGAAGGAGCTGGTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472364.1
CDS-3UTR CAA 90 bp AGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCAGATGGGTCTATTCCTaGAATAAGCGGTATATAACG +
Preference number: 5 (lower is better)
Translates to: RLPELQMKESTPGVGVRSRWVYS*NKRYIT
Trigger: CGTTATATACCGCTTATTCAAGGAATAGACCCATCT...GCTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAATTCTATTCTCTGCTaGCAGAGATGGGTCTATTCC +
Preference number: 5 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGNSILC*QRWVYS
Trigger: GGAATAGACCCATCTCTGCAAGCAGAGAATAGAATT...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCACGCTTCCCTCAGGCTTaGGCTGATTTGGATCTTCCA +
Preference number: 5 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSRFPQA*ADLDLP
Trigger: TGGAAGATCCAAATCAGCCAAAGCCTGAGGGAAGCG...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400274.5
CDS-3UTR CAA 90 bp TGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGTCAGACAGGGGGATTaGGGCTGTGTTGTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: CEFKFAGLSIYCTKTSRAVRQGD*GCVVPQ
Trigger: CTGGGGCACAACACAGCCCAAATCCCCCTGTCTGAC...AGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCAAGACGGCTTTCCCAGTaGTATCCAAGGCAGTCAGAC +
Preference number: 5 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSRRLSQ*YPRQSD
Trigger: GTCTGACTGCCTTGGATACAACTGGGAAAGCCGTCT...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTAGCGGGGGCCAACCTTaGAAAGCTGCCACCTCTCCT +
Preference number: 5 (lower is better)
Translates to: VCHNILYHSPTPWGNRATSGGQP*KAATSP
Trigger: AGGAGAGGTGGCAGCTTTCAAAGGTTGGCCCCCGCT...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp TTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATAGCGGGGGCCAACCTTaGAAAGCTGCCACCTCTCCT +
Preference number: 5 (lower is better)
Translates to: FKFAGLSIYCTKTSRAANSGGQP*KAATSP
Trigger: AGGAGAGGTGGCAGCTTTCAAAGGTTGGCCCCCGCT...ATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp TTTGCAATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGCAGTCCTTTGGGGGCTaGGCTAGATGCTTCCCATCA +
Preference number: 5 (lower is better)
Translates to: FAMKNTDKQSWSQGGPGGQSFGG*ARCFPS
Trigger: TGATGGGAAGCATCTAGCCAAGCCCCCAAAGGACTG...CCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCATTGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CAA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACCAGTCCTTTGGGGGCTaGGCTAGATGCTTCCCATCA +
Preference number: 5 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHQSFGG*ARCFPS
Trigger: TGATGGGAAGCATCTAGCCAAGCCCCCAAAGGACTG...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACGAGATCGACCACGGGTaGGCACCATCGGCCACAATC +
Preference number: 5 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHEIDHG*APSATI
Trigger: GATTGTGGCCGATGGTGCCAACCCGTGGTCGATCTC...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCAACAGGACTGCTTTTCTaGGAGGTGGTCCTCCCAGAT +
Preference number: 5 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSTGLLF*EVVLPD
Trigger: ATCTGGGAGGACCACCTCCAAGAAAAGCAGTCCTGT...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACTGGTCCAACCTCTGGTaGTTTCTGACGAGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHWSNLW*FLTRFG
Trigger: CCCAAACCTCGTCAGAAACAACCAGAGGTTGGACCA...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTAGCGGCATAAGGCGCTaGTGGCCGCGTGCGACATCT +
Preference number: 5 (lower is better)
Translates to: AQLARLMCGELITALLGTSGIRR*WPRATS
Trigger: AGATGTCGCACGCGGCCACAAGCGCCTTATGCCGCT...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAAGGCAGATGGCCACGTaGACCCTGCACCCGAACGTG +
Preference number: 5 (lower is better)
Translates to: ELAQLARLMCGELITALLRQMAT*TLHPNV
Trigger: CACGTTCGGGTGCAGGGTCAACGTGGCCATCTGCCT...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTAGGCAGATGGCCACGTaGACCCTGCACCCGAACGTG +
Preference number: 5 (lower is better)
Translates to: AQLARLMCGELITALLGTRQMAT*TLHPNV
Trigger: CACGTTCGGGTGCAGGGTCAACGTGGCCATCTGCCT...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACATTCCCACATCACACCTaGGACTGCTGGGGCTCATTC +
Preference number: 5 (lower is better)
Translates to: STPLSIKELAEEALCVTTFPHHT*DCWGSF
Trigger: GAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAA...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTAGTGAGGCAGCTGGTTaGTACTCTGCTATCTTCCCA +
Preference number: 5 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTSEAAG*YSAIFP
Trigger: TGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACT...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp CAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACGAGGATGGGTCCAGCTaGCTTCCTTTTTCCATCAGC +
Preference number: 5 (lower is better)
Translates to: QHTSFNKGTGRGGTVCDHEDGSS*LPFSIS
Trigger: GCTGATGGAAAAAGGAAGCAAGCTGGACCCATCCTC...GTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACATGATTCACAAAATTaGCCACCCTCAATACCCCAA +
Preference number: 5 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAHDSQN*PPSIPQ
Trigger: TTGGGGTATTGAGGGTGGCAAATTTTGTGAATCATG...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp TGCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCCATGATTCACAAAATTaGCCACCCTCAATACCCCAA +
Preference number: 5 (lower is better)
Translates to: CGVFPHHTLDCWGSFISGHDSQN*PPSIPQ
Trigger: TTGGGGTATTGAGGGTGGCAAATTTTGTGAATCATG...GCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCGGCGTGGGGGTCCGCAGCTGATTTGGATCTGGTaGCTGAACTTCCAACAATTC +
Preference number: 5 (lower is better)
Translates to: KTSRAANEGIYSRRGGPQLIWIW*LNFQQF
Trigger: GAATTGTTGGAAGTTCAGCAACCAGATCCAAATCAG...CTGCGGACCCCCACGCCGGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS CCA 90 bp GGAAAGATTAGAGGACTAGGGATTTGCCAAAAGTCACAGAGCCTATaGCAAAGCCCAGATGAGCCGAGTCCCGACCACAGCAAGAATAGC +
Preference number: 5 (lower is better)
Translates to: GKIRGLGICQKSQSL*QSPDEPSPDHSKNS
Trigger: GCTATTCTTGCTGTGGTCGGGACTCGGCTCATCTGGGCTTTGCCATAGGCTCTGTGACTTTTGGCAAATCCCTAGTCCTCTAATCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS-3UTR CAA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCTTCCTCTCTTTGTATTaGGCCAAAGCTGCTTGCACG +
Preference number: 5 (lower is better)
Translates to: ASTPLSIKELAEEALCVTFLSLY*AKAACT
Trigger: CGTGCAAGCAGCTTTGGCCAAATACAAAGAGAGGAA...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AAGGAGATGCGGGGATTGTTGAGAGGGATCTGTAAGAGCACAGGAAGGGCGAGTGGCATCTTCCTCTCTTaGTATTTGGCCAAAGCTGCT +
Preference number: 5 (lower is better)
Translates to: KEMRGLLRGICKSTGRASGIFLS*YLAKAA
Trigger: AGCAGCTTTGGCCAAATACAAAGAGAGGAAGATGCC...ACTCGCCCTTCCTGTGCTCTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGTCAGACAGGGGGATTaGGGCTGTGTTGTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: ELAQLARLMCGELITALLVRQGD*GCVVPQ
Trigger: CTGGGGCACAACACAGCCCAAATCCCCCTGTCTGAC...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp CTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTCAGTCCTTTGGGGGCTaGGCTAGATGCTTCCCATCA +
Preference number: 5 (lower is better)
Translates to: LGFPSTAQRLPELQMKESQSFGG*ARCFPS
Trigger: TGATGGGAAGCATCTAGCCAAGCCCCCAAAGGACTG...AGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp TTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTACTCCCCTGGACTGGAAGACGTaGAGGAAGGCGTCACAGGAG +
Preference number: 5 (lower is better)
Translates to: FPSTAQRLPELQMKESTPLDWKT*RKASQE
Trigger: CTCCTGTGACGCCTTCCTCAACGTCTTCCAGTCCAG...GGGAGTAGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp TTTGCAATGAAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAGGACTGCTTTTCTaGGAGGTGGTCCTCCCAGAT +
Preference number: 5 (lower is better)
Translates to: FAMKNTDKQSWSQGGPGGTGLLF*EVVLPD
Trigger: ATCTGGGAGGACCACCTCCAAGAAAAGCAGTCCTGT...CCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTTCATTGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CAA 90 bp CAGTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTAATCAGCCCGTCCAGTTaGCCCACGATGAAGACCAGG +
Preference number: 5 (lower is better)
Translates to: QYVTTYFTTVQHHGETGLISPSS*PTMKTR
Trigger: CCTGGTCTTCATCGTGGGCAAACTGGACGGGCTGAT...TAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAACTCTCTCAGCCCTTTaGTGCAGCTGGACACAGGTT +
Preference number: 5 (lower is better)
Translates to: STPLSIKELAEEALCVTTTLSAL*CSWTQV
Trigger: AACCTGTGTCCAGCTGCACAAAAGGGCTGAGAGAGT...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTTCTCACCCCGAGAGTaGATAGGGATCACCCCTGGG +
Preference number: 5 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHFSPRE*IGITPG
Trigger: CCCAGGGGTGATCCCTATCAACTCTCGGGGTGAGAA...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCAGAATTAATAACAGCTTaGTTAGGCACTGATCCAGAC +
Preference number: 5 (lower is better)
Translates to: AVSSHITPWTAGAHSSPAELITA*LGTDPD
Trigger: GTCTGGATCAGTGCCTAACAAAGCTGTTATTAATTC...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp ATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACCTGATTTGGATCTGGTaGCTGAACTTCCAACAATTC +
Preference number: 5 (lower is better)
Translates to: IQINKAGAREDRAGQANHLIWIW*LNFQQF
Trigger: GAATTGTTGGAAGTTCAGCAACCAGATCCAAATCAG...GTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CAA 90 bp AAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCAGGCTTTGGCTGATTaGGATCTGGTTGCTGAACTT +
Preference number: 5 (lower is better)
Translates to: KIQINKAGAREDRAGQANQALAD*DLVAEL
Trigger: AAGTTCAGCAACCAGATCCAAATCAGCCAAAGCCTG...GTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS CCA 90 bp GAAGGAGAAATAGATCAGGCGGCTACAAAACGGCACATTAACAACTaGGAAACTGGGTCTCCATGCTGCCAACAGCCAGCTTTCGAGAAC +
Preference number: 5 (lower is better)
Translates to: EGEIDQAATKRHINN*ETGSPCCQQPAFEN
Trigger: GTTCTCGAAAGCTGGCTGTTGGCAGCATGGAGACCCAGTTTCCCAGTTGTTAATGTGCCGTTTTGTAGCCGCCTGATCTATTTCTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472364.1
ENST00000481883.1
CDS-3UTR CAA 90 bp AAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAATTCCTCTCTTTGTATTaGGCCAAAGCTGCTTGCACG +
Preference number: 5 (lower is better)
Translates to: KNTDKQSWSQGGPGGTSQFLSLY*AKAACT
Trigger: CGTGCAAGCAGCTTTGGCCAAATACAAAGAGAGGAA...TTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CAA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTTCAGTGGAGGGCGCTTaGGCCTCTTCAGGGTGTTCA +
Preference number: 5 (lower is better)
Translates to: AQLARLMCGELITALLGTSVEGA*ASSGCS
Trigger: TGAACACCCTGAAGAGGCCAAAGCGCCCTCCACTGA...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGGGGATTTGGGCTGTGTaGTGCCCCAGCGCTGCAAGG +
Preference number: 5 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMGIWAV*CPSAAR
Trigger: CCTTGCAGCGCTGGGGCACAACACAGCCCAAATCCC...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAGACGGCTTTCCCAGTaGTATCCAAGGCAGTCAGAC +
Preference number: 5 (lower is better)
Translates to: EFKFAGLSIYCTKTSRAARRLSQ*YPRQSD
Trigger: GTCTGACTGCCTTGGATACAACTGGGAAAGCCGTCT...TGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCTGCCTGCATCCTTTCTaGTTAATGGCACTTCTATGG +
Preference number: 5 (lower is better)
Translates to: ASTPLSIKELAEEALCVTCLHPF*LMALLW
Trigger: CCATAGAAGTGCCATTAACAAGAAAGGATGCAGGCA...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTCAGTCCTTTGGGGGCTaGGCTAGATGCTTCCCATCA +
Preference number: 5 (lower is better)
Translates to: VCHNILYHSPTPWGNRATQSFGG*ARCFPS
Trigger: TGATGGGAAGCATCTAGCCAAGCCCCCAAAGGACTG...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTACTGGACTGGAAGACGTaGAGGAAGGCGTCACAGGAG +
Preference number: 5 (lower is better)
Translates to: ELAQLARLMCGELITALLLDWKT*RKASQE
Trigger: CTCCTGTGACGCCTTCCTCAACGTCTTCCAGTCCAG...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCATCAGCCCGTCCAGTTaGCCCACGATGAAGACCAGG +
Preference number: 5 (lower is better)
Translates to: RLCEFKFAGLSIYCTKTSISPSS*PTMKTR
Trigger: CCTGGTCTTCATCGTGGGCAAACTGGACGGGCTGAT...GGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTACTTGTGACGGTGCCCTaGGCGTTCAGCAGCAAGAAC +
Preference number: 5 (lower is better)
Translates to: ELAQLARLMCGELITALLLVTVP*AFSSKN
Trigger: GTTCTTGCTGCTGAACGCCAAGGGCACCGTCACAAG...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACAGGACGCATGCAGACTaGCTGACCTCCACGATCATC +
Preference number: 5 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHRTHAD*LTSTII
Trigger: GATGATCGTGGAGGTCAGCAAGTCTGCATGCGTCCT...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GCGGTGTCTTCCCACATCACACCTTGGACTGCTGGGGCTCATTCATCTCCGGCATTGCTATCTTCTTTTTaGGGATGTCATCTGTGTCTA +
Preference number: 5 (lower is better)
Translates to: AVSSHITPWTAGAHSSPALLSSF*GCHLCL
Trigger: TAGACACAGATGACATCCCAAAAAAGAAGATAGCAA...TGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAAGACACCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTATTCTCACCCCGAGAGTaGATAGGGATCACCCCTGGG +
Preference number: 5 (lower is better)
Translates to: ELAQLARLMCGELITALLFSPRE*IGITPG
Trigger: CCCAGGGGTGATCCCTATCAACTCTCGGGGTGAGAA...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AATGTAACCATCTCCACCTTCAATACGGGGCAATGCTGTTCCCTGCTCCCCTCACAGGCTTTGGCTGATTaGGATCTGGTTGCTGAACTT +
Preference number: 5 (lower is better)
Translates to: NVTISTFNTGQCCSLLPSQALAD*DLVAEL
Trigger: AAGTTCAGCAACCAGATCCAAATCAGCCAAAGCCTG...TGAGGGGAGCAGGGAACAGCATTGCCCCGTATTGAAGGTGGAGATGGTTACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417564.3
ENST00000651436.1
CDS TCA 90 bp AAAGGGCAGATCATGACGTTGGAAATGATCACTCTGAGGGTCTGTTaGCAACAGTCAGGATGTCAACCTTTCCACAGCACACCTGCCATG +
Preference number: 5 (lower is better)
Translates to: KGQIMTLEMITLRVC*QQSGCQPFHSTPAM
Trigger: CATGGCAGGTGTGCTGTGGAAAGGTTGACATCCTGACTGTTGTCAACAGACCCTCAGAGTGATCATTTCCAACGTCATGATCTGCCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478105.5
CDS-3UTR CAA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTAACGTGCAAGCAGCTTaGCCCTTTTCTTTTCATATC +
Preference number: 5 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLNVQAA*PFSFHI
Trigger: GATATGAAAAGAAAAGGGCAAAGCTGCTTGCACGTT...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AATGCTGTTCCCTGCTCCCCTCAACTGTACTGCCGGTACTCACCAAACAGCACTAATTCTATTCTCTGCTaGCAGAGATGGGTCTATTCC +
Preference number: 5 (lower is better)
Translates to: NAVPCSPQLYCRYSPNSTNSILC*QRWVYS
Trigger: GGAATAGACCCATCTCTGCAAGCAGAGAATAGAATT...AGTGCTGTTTGGTGAGTACCGGCAGTACAGTTGAGGGGAGCAGGGAACAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCCGAGACTTCTGCTGCTaGGGTGCAGCGGCCGTGGTT +
Preference number: 5 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVRDFCC*GAAAVV
Trigger: AACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTCG...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp CAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAACGAGACTTCTGCTGCTaGGGTGCAGCGGCCGTGGTT +
Preference number: 5 (lower is better)
Translates to: QFLGFVNSSLLGFPSTAQRDFCC*GAAAVV
Trigger: AACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTCG...TTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp TTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTGTCAGACAGGGGGATTaGGGCTGTGTTGTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: FRLCEFKFAGLSIYCTKTVRQGD*GCVVPQ
Trigger: CTGGGGCACAACACAGCCCAAATCCCCCTGTCTGAC...AGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp AAAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAATGCCTGCATCCTTTCTaGTTAATGGCACTTCTATGG +
Preference number: 5 (lower is better)
Translates to: KNTDKQSWSQGGPGGTSQCLHPF*LMALLW
Trigger: CCATAGAAGTGCCATTAACAAGAAAGGATGCAGGCA...TTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CAA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACCGTACTGCCTTCTTaGCTGGTTTTATACTCAATG +
Preference number: 5 (lower is better)
Translates to: ASTPLSIKELAEEALCVTTVLPS*LVLYSM
Trigger: CATTGAGTATAAAACCAGCAAAGAAGGCAGTACGGT...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCAGCGGCATAAGGCGCTaGTGGCCGCGTGCGACATCT +
Preference number: 5 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVSGIRR*WPRATS
Trigger: AGATGTCGCACGCGGCCACAAGCGCCTTATGCCGCT...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCAGGCAGATGGCCACGTaGACCCTGCACCCGAACGTG +
Preference number: 5 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVRQMAT*TLHPNV
Trigger: CACGTTCGGGTGCAGGGTCAACGTGGCCATCTGCCT...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTTGTCCACGTAGACGGTaGTGGGGTCCGGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTCPRRR*WGPGQL
Trigger: CAGCTGGCCCGGACCCCACAACCGTCTACGTGGACA...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTTCCTCCAGCACCACGTaGGTCACCAGGGCCACCAGG +
Preference number: 5 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTSSSTT*VTRATR
Trigger: CCTGGTGGCCCTGGTGACCAACGTGGTGCTGGAGGA...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS CCA 90 bp AAATTCAGGAGGGGAGAGGGTGGATGGCAGTGTCCGCTGTTCACATaGCTAGACCATAGCTCCGAACTACCAAACATCATATTTATTTCC +
Preference number: 5 (lower is better)
Translates to: KFRRGEGGWQCPLFT*LDHSSELPNIIFIS
Trigger: GGAAATAAATATGATGTTTGGTAGTTCGGAGCTATGGTCTAGCCATGTGAACAGCGGACACTGCCATCCACCCTCTCCCCTCCTGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS-3UTR CAA 90 bp AGAACAACCTCGGTGCCTGTGATTCCTCACAATGCCCATGCCAGGCCTTTCCTTAGATGGGTCTATTCCTaGAATAAGCGGTATATAACG +
Preference number: 5 (lower is better)
Translates to: RTTSVPVIPHNAHARPFLRWVYS*NKRYIT
Trigger: CGTTATATACCGCTTATTCAAGGAATAGACCCATCT...AAGGAAAGGCCTGGCATGGGCATTGTGAGGAATCACAGGCACCGAGGTTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AAAATACAGATAAACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACAGATGGGTCTATTCCTaGAATAAGCGGTATATAACG +
Preference number: 5 (lower is better)
Translates to: KIQINKAGAREDRAGQANRWVYS*NKRYIT
Trigger: CGTTATATACCGCTTATTCAAGGAATAGACCCATCT...GTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTATCTGTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS-3UTR CAA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCAGATGGGTCTATTCCTaGAATAAGCGGTATATAACG +
Preference number: 5 (lower is better)
Translates to: ASTPLSIKELAEEALCVTRWVYS*NKRYIT
Trigger: CGTTATATACCGCTTATTCAAGGAATAGACCCATCT...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCGTCAGACAGGGGGATTaGGGCTGTGTTGTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVVRQGD*GCVVPQ
Trigger: CTGGGGCACAACACAGCCCAAATCCCCCTGTCTGAC...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCGAGATCGACCACGGGTaGGCACCATCGGCCACAATC +
Preference number: 5 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVEIDHG*APSATI
Trigger: GATTGTGGCCGATGGTGCCAACCCGTGGTCGATCTC...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp ACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAGAGATCGACCACGGGTaGGCACCATCGGCCACAATC +
Preference number: 5 (lower is better)
Translates to: TIFRLCEFKFAGLSIYCTEIDHG*APSATI
Trigger: GATTGTGGCCGATGGTGCCAACCCGTGGTCGATCTC...TGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTACAACGTCATCTGCATaGTGTCTGCGAACTCCAGTG +
Preference number: 5 (lower is better)
Translates to: VCHNILYHSPTPWGNRATTTSSA*CLRTPV
Trigger: CACTGGAGTTCGCAGACACAATGCAGATGACGTTGT...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACTTGGTCCAACCTCTGGTaGTTTCTGACGAGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: AQLARLMCGELITALLGTWSNLW*FLTRFG
Trigger: CCCAAACCTCGTCAGAAACAACCAGAGGTTGGACCA...AGTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACGGTTCCCCACGATCATaGAGGCTGGTCCAACCTCTG +
Preference number: 5 (lower is better)
Translates to: SRLILEKPGCFCEACMIHGSPRS*RLVQPL
Trigger: CAGAGGTTGGACCAGCCTCAATGATCGTGGGGAACC...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGTTCTCACCCCGAGAGTaGATAGGGATCACCCCTGGG +
Preference number: 5 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMFSPRE*IGITPG
Trigger: CCCAGGGGTGATCCCTATCAACTCTCGGGGTGAGAA...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACAAGGAGATGCGGGGATaGTTGAGAGGGATCTGTAAG +
Preference number: 5 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHKEMRG*LRGICK
Trigger: CTTACAGATCCCTCTCAACAATCCCCGCATCTCCTT...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GTATGTCACAACATACTTTACCACAGTCCAACACCATGGGGAAACAGGGCTACTAGTGAGGCAGCTGGTTaGTACTCTGCTATCTTCCCA +
Preference number: 5 (lower is better)
Translates to: VCHNILYHSPTPWGNRATSEAAG*YSAIFP
Trigger: TGGGAAGATAGCAGAGTACAAACCAGCTGCCTCACT...AGTAGCCCTGTTTCCCCATGGTGTTGGACTGTGGTAAAGTATGTTGTGACATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GCCAGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCGAATTAATAACAGCTTaGTTAGGCACTGATCCAGAC +
Preference number: 5 (lower is better)
Translates to: ASTPLSIKELAEEALCVTELITA*LGTDPD
Trigger: GTCTGGATCAGTGCCTAACAAAGCTGTTATTAATTC...GGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS TCA 90 bp GTTAAACAGGAGACACCAGCAACATTAGTGTTCCCACATGTATTCTaGACGCTCTGGGCTTTCACAGGCAAGAGGCGACACATGATTTGT +
Preference number: 5 (lower is better)
Translates to: VKQETPATLVFPHVF*TLWAFTGKRRHMIC
Trigger: ACAAATCATGTGTCGCCTCTTGCCTGTGAAAGCCCAGAGCGTTCAGAATACATGTGGGAACACTAATGTTGCTGGTGTCTCCTGTTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS CCA 90 bp AGAGATGCGGGCACTCCATTCACCCAGGGCAGAGCCAGAAACACGTaGGTAAAGAAGACCTTTCTGGCCTTTTCAATAAAATATTCCATA +
Preference number: 5 (lower is better)
Translates to: RDAGTPFTQGRARNT*VKKTFLAFSIKYSI
Trigger: TATGGAATATTTTATTGAAAAGGCCAGAAAGGTCTTCTTTACCCACGTGTTTCTGGCTCTGCCCTGGGTGAATGGAGTGCCCGCATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472364.1
CDS-3UTR CAA 90 bp AGCACACCTCTTTCAATAAAGGAACTGGCAGAGGAGGCACTGTGTGTGACCACAAATTCTATTCTCTGCTaGCAGAGATGGGTCTATTCC +
Preference number: 5 (lower is better)
Translates to: STPLSIKELAEEALCVTTNSILC*QRWVYS
Trigger: GGAATAGACCCATCTCTGCAAGCAGAGAATAGAATT...TGTGGTCACACACAGTGCCTCCTCTGCCAGTTCCTTTATTGAAAGAGGTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATCGAGACTTCTGCTGCTaGGGTGCAGCGGCCGTGGTT +
Preference number: 5 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYRDFCC*GAAAVV
Trigger: AACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTCG...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp TTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATTTCCTCTCTTTGTATTaGGCCAAAGCTGCTTGCACG +
Preference number: 5 (lower is better)
Translates to: FKFAGLSIYCTKTSRAANFLSLY*AKAACT
Trigger: CGTGCAAGCAGCTTTGGCCAAATACAAAGAGAGGAA...ATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp TTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGGCATCTTCCTCTCTTaGTATTTGGCCAAAGCTGCT +
Preference number: 5 (lower is better)
Translates to: FKFAGLSIYCTKTSRAANGIFLS*YLAKAA
Trigger: AGCAGCTTTGGCCAAATACAAAGAGAGGAAGATGCC...ATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp GGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGGCATCTTCCTCTCTTaGTATTTGGCCAAAGCTGCT +
Preference number: 5 (lower is better)
Translates to: GFVNSSLLGFPSTAQRLPGIFLS*YLAKAA
Trigger: AGCAGCTTTGGCCAAATACAAAGAGAGGAAGATGCC...GGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp CAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAATCAGTGGAGGGCGCTTaGGCCTCTTCAGGGTGTTCA +
Preference number: 5 (lower is better)
Translates to: QFLGFVNSSLLGFPSTAQSVEGA*ASSGCS
Trigger: TGAACACCCTGAAGAGGCCAAAGCGCCCTCCACTGA...TTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGGGATTTGGGCTGTGTaGTGCCCCAGCGCTGCAAGG +
Preference number: 5 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYGIWAV*CPSAAR
Trigger: CCTTGCAGCGCTGGGGCACAACACAGCCCAAATCCC...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCATGCCTGCATCCTTTCTaGTTAATGGCACTTCTATGG +
Preference number: 5 (lower is better)
Translates to: EFKFAGLSIYCTKTSRAACLHPF*LMALLW
Trigger: CCATAGAAGTGCCATTAACAAGAAAGGATGCAGGCA...TGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATAGCGGCATAAGGCGCTaGTGGCCGCGTGCGACATCT +
Preference number: 5 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYSGIRR*WPRATS
Trigger: AGATGTCGCACGCGGCCACAAGCGCCTTATGCCGCT...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAACAGGCTTTGGCTGATTaGGATCTGGTTGCTGAACTT +
Preference number: 5 (lower is better)
Translates to: KFAGLSIYCTKTSRAANEQALAD*DLVAEL
Trigger: AAGTTCAGCAACCAGATCCAAATCAGCCAAAGCCTG...TTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATAGCTTTCCCAGCCTGTaGGGCTGGAGGCAGATGGCC +
Preference number: 5 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYSFPSL*GWRQMA
Trigger: GGCCATCTGCCTCCAGCCCAACAGGCTGGGAAAGCT...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651436.1
CDS TCA 90 bp CCAGAGGCATTCACTTCTAGAGACGGATCGCCACTTTCTAGTGTTTaGAGGAATCAAGCAGATTCTTCCCAAGTACTGATAACGGACAGT +
Preference number: 5 (lower is better)
Translates to: PEAFTSRDGSPLSSV*RNQADSSQVLITDS
Trigger: ACTGTCCGTTATCAGTACTTGGGAAGAATCTGCTTGATTCCTTCAAACACTAGAAAGTGGCGATCCGTCTCTAGAAGTGAATGCCTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS-3UTR CAA 90 bp AAGTGCAAACTTGCAGTACAGCAGAGAACAACCTCGGTGCCTGTGATTCCTCACAGATGGGTCTATTCCTaGAATAAGCGGTATATAACG +
Preference number: 5 (lower is better)
Translates to: KCKLAVQQRTTSVPVIPHRWVYS*NKRYIT
Trigger: CGTTATATACCGCTTATTCAAGGAATAGACCCATCT...GTGAGGAATCACAGGCACCGAGGTTGTTCTCTGCTGTACTGCAAGTTTGCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp TGTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTCAGTGGAGGGCGCTTaGGCCTCTTCAGGGTGTTCA +
Preference number: 5 (lower is better)
Translates to: CTTIFRLCEFKFAGLSIYSVEGA*ASSGCS
Trigger: TGAACACCCTGAAGAGGCCAAAGCGCCCTCCACTGA...GTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACTCAGTGGAGGGCGCTTaGGCCTCTTCAGGGTGTTCA +
Preference number: 5 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHSVEGA*ASSGCS
Trigger: TGAACACCCTGAAGAGGCCAAAGCGCCCTCCACTGA...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATAGCGGGGGCCAACCTTaGAAAGCTGCCACCTCTCCT +
Preference number: 5 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYSGGQP*KAATSP
Trigger: AGGAGAGGTGGCAGCTTTCAAAGGTTGGCCCCCGCT...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp TTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACAGTCCTTTGGGGGCTaGGCTAGATGCTTCCCATCA +
Preference number: 5 (lower is better)
Translates to: FLGFVNSSLLGFPSTAQRQSFGG*ARCFPS
Trigger: TGATGGGAAGCATCTAGCCAAGCCCCCAAAGGACTG...TCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp GGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTAGGCACAGACCAGCATCCCTTTaGAAATCCAGCACGTTTGTT +
Preference number: 5 (lower is better)
Translates to: GPVSQTHVWRINNSFVRHRPASL*KSSTFV
Trigger: AACAAACGTGCTGGATTTCAAAAGGGATGCTGGTCT...GTGCCTAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGACAGGACTGCTTTTCTaGGAGGTGGTCCTCCCAGAT +
Preference number: 5 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMTGLLF*EVVLPD
Trigger: ATCTGGGAGGACCACCTCCAAGAAAAGCAGTCCTGT...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTACCTCCACGATCATCTaGACGGTGGGCAGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTTSTII*TVGSVV
Trigger: CACCACACTGCCCACCGTCAAGATGATCGTGGAGGT...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp ACAGGATTATTAGAATTCCAGTATGTCACAACATACTTTACCACAGTCCAACACTGTGCGCCTAGGCCCTaGGTGCACATCTCCATCACA +
Preference number: 5 (lower is better)
Translates to: TGLLEFQYVTTYFTTVQHCAPRP*VHISIT
Trigger: TGTGATGGAGATGTGCACCAAGGGCCTAGGCGCACA...GTGTTGGACTGTGGTAAAGTATGTTGTGACATACTGGAATTCTAATAATCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp CTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTGCAAATGAAGGAATCTCTGATTTGGATCTGGTaGCTGAACTTCCAACAATTC +
Preference number: 5 (lower is better)
Translates to: LGFPSTAQRLPELQMKESLIWIW*LNFQQF
Trigger: GAATTGTTGGAAGTTCAGCAACCAGATCCAAATCAG...AGATTCCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS GCA 90 bp CACATTCTTCGTGATTCCAAGCAATCCATAGTACGCTGTGCCAGTTaGACTGGAACTGACGCATATTTCTCCCACTTCATCAGTTTTACA +
Preference number: 5 (lower is better)
Translates to: HILRDSKQSIVRCAS*TGTDAYFSHFISFT
Trigger: TGTAAAACTGATGAAGTGGGAGAAATATGCGTCAGTTCCAGTGCAACTGGCACAGCGTACTATGGATTGCTTGGAATCACGAAGAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000480553.1
ENST00000494435.5
ENST00000651436.1
CDS-3UTR CAA 90 bp AGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCAGACCAGCATCCCTTTaGAAATCCAGCACGTTTGTT +
Preference number: 5 (lower is better)
Translates to: RLCEFKFAGLSIYCTKTSRPASL*KSSTFV
Trigger: AACAAACGTGCTGGATTTCAAAAGGGATGCTGGTCT...GGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp CAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAACAGGACTGCTTTTCTaGGAGGTGGTCCTCCCAGAT +
Preference number: 5 (lower is better)
Translates to: QFLGFVNSSLLGFPSTAQTGLLF*EVVLPD
Trigger: ATCTGGGAGGACCACCTCCAAGAAAAGCAGTCCTGT...TTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCACTCTCTCAGCCCTTTaGTGCAGCTGGACACAGGTT +
Preference number: 5 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVTLSAL*CSWTQV
Trigger: AACCTGTGTCCAGCTGCACAAAAGGGCTGAGAGAGT...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTAGGACGCATGCAGACTaGCTGACCTCCACGATCATC +
Preference number: 5 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTRTHAD*LTSTII
Trigger: GATGATCGTGGAGGTCAGCAAGTCTGCATGCGTCCT...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCAATTCTATTCTCTGCTaGCAGAGATGGGTCTATTCC +
Preference number: 5 (lower is better)
Translates to: RLCEFKFAGLSIYCTKTSNSILC*QRWVYS
Trigger: GGAATAGACCCATCTCTGCAAGCAGAGAATAGAATT...GGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp CAGCCATTCTATTGTAAGGAATGTCCATTAGACTACTTCCCAAACCTCTGTATGTTCCTCTCTTTGTATTaGGCCAAAGCTGCTTGCACG +
Preference number: 5 (lower is better)
Translates to: QPFYCKECPLDYFPNLCMFLSLY*AKAACT
Trigger: CGTGCAAGCAGCTTTGGCCAAATACAAAGAGAGGAA...CATACAGAGGTTTGGGAAGTAGTCTAATGGACATTCCTTACAATAGAATGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp ACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAACAACGTCATCTGCATaGTGTCTGCGAACTCCAGTG +
Preference number: 5 (lower is better)
Translates to: TIFRLCEFKFAGLSIYCTTTSSA*CLRTPV
Trigger: CACTGGAGTTCGCAGACACAATGCAGATGACGTTGT...TGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGACAACGTCATCTGCATaGTGTCTGCGAACTCCAGTG +
Preference number: 5 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWTTSSA*CLRTPV
Trigger: CACTGGAGTTCGCAGACACAATGCAGATGACGTTGT...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATTTCCCACATCACACCTaGGACTGCTGGGGCTCATTC +
Preference number: 5 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYFPHHT*DCWGSF
Trigger: GAATGAGCCCCAGCAGTCCAAGGTGTGATGTGGGAA...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GAGCTGGCCCAGTTAGCCAGACTCATGTGTGGAGAATTAATAACAGCTTTGTTACTGATTTGGATCTGGTaGCTGAACTTCCAACAATTC +
Preference number: 5 (lower is better)
Translates to: ELAQLARLMCGELITALLLIWIW*LNFQQF
Trigger: GAATTGTTGGAAGTTCAGCAACCAGATCCAAATCAG...TAACAAAGCTGTTATTAATTCTCCACACATGAGTCTGGCTAACTGGGCCAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp TGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTCCCGAGCTTTTGTGAATTCAAGTTaGCTGGGCTTTCCATCTACT +
Preference number: 5 (lower is better)
Translates to: CEFKFAGLSIYCTKTSRAFVNSS*LGFPST
Trigger: AGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAA...AGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCGGCATCTTCCTCTCTTaGTATTTGGCCAAAGCTGCT +
Preference number: 5 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVGIFLS*YLAKAA
Trigger: AGCAGCTTTGGCCAAATACAAAGAGAGGAAGATGCC...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATAGACGGCTTTCCCAGTaGTATCCAAGGCAGTCAGAC +
Preference number: 5 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYRRLSQ*YPRQSD
Trigger: GTCTGACTGCCTTGGATACAACTGGGAAAGCCGTCT...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACTGCCTGCATCCTTTCTaGTTAATGGCACTTCTATGG +
Preference number: 5 (lower is better)
Translates to: SRLILEKPGCFCEACMIHCLHPF*LMALLW
Trigger: CCATAGAAGTGCCATTAACAAGAAAGGATGCAGGCA...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp TTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGACTTGCCTGCATCCTTTCTaGTTAATGGCACTTCTATGG +
Preference number: 5 (lower is better)
Translates to: FRLCEFKFAGLSIYCTKTCLHPF*LMALLW
Trigger: CCATAGAAGTGCCATTAACAAGAAAGGATGCAGGCA...AGTCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATTGGTCCAACCTCTGGTaGTTTCTGACGAGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYWSNLW*FLTRFG
Trigger: CCCAAACCTCGTCAGAAACAACCAGAGGTTGGACCA...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTTTCCTCTCTTTGTATTaGGCCAAAGCTGCTTGCACG +
Preference number: 5 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTFLSLY*AKAACT
Trigger: CGTGCAAGCAGCTTTGGCCAAATACAAAGAGAGGAA...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGTGCCTGCATCCTTTCTaGTTAATGGCACTTCTATGG +
Preference number: 5 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWCLHPF*LMALLW
Trigger: CCATAGAAGTGCCATTAACAAGAAAGGATGCAGGCA...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp TCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATGAACTTGTCAGACCAGCATCCCTTTaGAAATCCAGCACGTTTGTT +
Preference number: 5 (lower is better)
Translates to: SPRKWSQVSPVNSIYELVRPASL*KSSTFV
Trigger: AACAAACGTGCTGGATTTCAAAAGGGATGCTGGTCT...GACAAGTTCATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp ACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAGACCAGCATCCCTTTaGAAATCCAGCACGTTTGTT +
Preference number: 5 (lower is better)
Translates to: TIFRLCEFKFAGLSIYCTRPASL*KSSTFV
Trigger: AACAAACGTGCTGGATTTCAAAAGGGATGCTGGTCT...TGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATACAACGTCATCTGCATaGTGTCTGCGAACTCCAGTG +
Preference number: 5 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYTTSSA*CLRTPV
Trigger: CACTGGAGTTCGCAGACACAATGCAGATGACGTTGT...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACCATGATTCACAAAATTaGCCACCCTCAATACCCCAA +
Preference number: 5 (lower is better)
Translates to: SRLILEKPGCFCEACMIHHDSQN*PPSIPQ
Trigger: TTGGGGTATTGAGGGTGGCAAATTTTGTGAATCATG...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACCTGATTTGGATCTGGTaGCTGAACTTCCAACAATTC +
Preference number: 5 (lower is better)
Translates to: SRLILEKPGCFCEACMIHLIWIW*LNFQQF
Trigger: GAATTGTTGGAAGTTCAGCAACCAGATCCAAATCAG...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTCAGGCTTTGGCTGATTaGGATCTGGTTGCTGAACTT +
Preference number: 5 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTQALAD*DLVAEL
Trigger: AAGTTCAGCAACCAGATCCAAATCAGCCAAAGCCTG...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp TTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGAAACGTGCAAGCAGCTTaGCCCTTTTCTTTTCATATC +
Preference number: 5 (lower is better)
Translates to: FLGFVNSSLLGFPSTAQRNVQAA*PFSFHI
Trigger: GATATGAAAAGAAAAGGGCAAAGCTGCTTGCACGTT...TCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp ACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAACGTGCAAGCAGCTTaGCCCTTTTCTTTTCATATC +
Preference number: 5 (lower is better)
Translates to: TIFRLCEFKFAGLSIYCTNVQAA*PFSFHI
Trigger: GATATGAAAAGAAAAGGGCAAAGCTGCTTGCACGTT...TGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp TTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTGCACAAAGAAATTCTATTCTCTGCTaGCAGAGATGGGTCTATTCC +
Preference number: 5 (lower is better)
Translates to: FLGFVNSSLLGFPSTAQRNSILC*QRWVYS
Trigger: GGAATAGACCCATCTCTGCAAGCAGAGAATAGAATT...TCTTTGTGCAGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGACCGTACTGCCTTCTTaGCTGGTTTTATACTCAATG +
Preference number: 5 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWTVLPS*LVLYSM
Trigger: CATTGAGTATAAAACCAGCAAAGAAGGCAGTACGGT...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp CTGGCTTATCTTTCTGAAACAAAGCATCTAAATTTGACAGTCCAAAATGGCACTAGACCAGCATCCCTTTaGAAATCCAGCACGTTTGTT +
Preference number: 5 (lower is better)
Translates to: LAYLSETKHLNLTVQNGTRPASL*KSSTFV
Trigger: AACAAACGTGCTGGATTTCAAAAGGGATGCTGGTCT...AGTGCCATTTTGGACTGTCAAATTTAGATGCTTTGTTTCAGAAAGATAAGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATCAGGCTTTGGCTGATTaGGATCTTCCAACAATTCCT +
Preference number: 5 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYQALAD*DLPTIP
Trigger: AGGAATTGTTGGAAGATCCAAATCAGCCAAAGCCTG...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400274.5
CDS-3UTR CAA 90 bp TGTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACACCGTACTGCCTTCTTaGCTGGTTTTATACTCAATG +
Preference number: 5 (lower is better)
Translates to: CTTIFRLCEFKFAGLSIYTVLPS*LVLYSM
Trigger: CATTGAGTATAAAACCAGCAAAGAAGGCAGTACGGT...GTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp TCCAGACTAATTCTGGAAAAACCTGGTTGTTTCTGTGAAGCATGCATGATTCACTTGCTATCTTCTTTTTaGGGATGTCATCTGTGTCTA +
Preference number: 5 (lower is better)
Translates to: SRLILEKPGCFCEACMIHLLSSF*GCHLCL
Trigger: TAGACACAGATGACATCCCAAAAAAGAAGATAGCAA...GTGAATCATGCATGCTTCACAGAAACAACCAGGTTTTTCCAGAATTAGTCTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp ATGGATATGAAAACCTTAGACTTTACCACAATGCTTCCAAATCTGCTGACTTGGGAATTAATAACAGCTTaGTTAGGCACTGATCCAGAC +
Preference number: 5 (lower is better)
Translates to: MDMKTLDFTTMLPNLLTWELITA*LGTDPD
Trigger: GTCTGGATCAGTGCCTAACAAAGCTGTTATTAATTC...CCAAGTCAGCAGATTTGGAAGCATTGTGGTAAAGTCTAAGGTTTTCATATCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp GTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTAGATGGGTCTATTCCTaGAATAAGCGGTATATAACG +
Preference number: 5 (lower is better)
Translates to: VQQFLGFVNSSLLGFPSTRWVYS*NKRYIT
Trigger: CGTTATATACCGCTTATTCAAGGAATAGACCCATCT...AGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS-3UTR CAA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATACCGTACTGCCTTCTTaGCTGGTTTTATACTCAATG +
Preference number: 5 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYTVLPS*LVLYSM
Trigger: CATTGAGTATAAAACCAGCAAAGAAGGCAGTACGGT...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS-3UTR CAA 90 bp TGTACAACAATTTTTAGGCTTTGTGAATTCAAGTTTGCTGGGCTTTCCATCTACTTTGTGAATTCAAGTTaGCTGGGCTTTCCATCTACT +
Preference number: 5 (lower is better)
Translates to: CTTIFRLCEFKFAGLSIYFVNSS*LGFPST
Trigger: AGTAGATGGAAAGCCCAGCAAACTTGAATTCACAAA...GTAGATGGAAAGCCCAGCAAACTTGAATTCACAAAGCCTAAAAATTGTTGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435722.7
ENST00000466639.5
CDS CCA 90 bp AGCTCCGAACTACCAAACATCATATTTATTTCCTTAAAAGACGGTTaGCTCAAATCCCCATATAACCTAAATAATACCCAAGAAATGGTA +
Preference number: 5 (lower is better)
Translates to: SSELPNIIFISLKDG*LKSPYNLNNTQEMV
Trigger: TACCATTTCTTGGGTATTATTTAGGTTATATGGGGATTTGAGCCAACCGTCTTTTAAGGAAATAAATATGATGTTTGGTAGTTCGGAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS-3UTR CAA 90 bp AATCAAGTTTCTCCCCGTAAATGGTCTCAAGTTTCTCCCGTAAATTCTATATATTTGCTATCTTCTTTTTaGGGATGTCATCTGTGTCTA +
Preference number: 5 (lower is better)
Translates to: NQVSPRKWSQVSPVNSIYLLSSF*GCHLCL
Trigger: TAGACACAGATGACATCCCAAAAAAGAAGATAGCAA...ATATATAGAATTTACGGGAGAAACTTGAGACCATTTACGGGGAGAAACTTGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS CCA 72 bp GCGGCGCCGCCTCCAGCGGGCACCCGCGGTCAGCCATaGCCAGGCCGGCTAGCGTCCGGGCAGAGGCTGGAA +
Preference number: 6 (lower is better)
Translates to: AAPPPAGTRGQP*PGRLASGQRLE
Trigger: TTCCAGCCTCTGCCCGGACGCTAGCCGGCCTGGCCATGGCTGACCGCGGGTGCCCGCTGGAGGCGGCGCCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS GCA 72 bp CACAGGGACACCTATGTGGGTGTGGGCCTCGAGGCCTaGGAGTGCAGTGGTAGCGGCGGCCCCCGGCGTGGC +
Preference number: 6 (lower is better)
Translates to: HRDTYVGVGLEA*ECSGSGGPRRG
Trigger: GCCACGCCGGGGGCCGCCGCTACCACTGCACTCGCAGGCCTCGAGGCCCACACCCACATAGGTGTCCCTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466639.5
CDS CCA 72 bp CTAGCGTCCGGGCAGAGGCTGGAACCGGACCGGGCCTaGCGGCGGCAGCGCAAACCTCGGCTACGTAGCTCC +
Preference number: 6 (lower is better)
Translates to: LASGQRLEPDRA*RRQRKPRLRSS
Trigger: GGAGCTACGTAGCCGAGGTTTGCGCTGCCGCCGCCAGGCCCGGTCCGGTTCCAGCCTCTGCCCGGACGCTAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS CCA 72 bp ACCCGGTCGAGCCAGGGCTCGACGCTGGAATGGCTCTaGAGCGGAGTGGAGGTGAGTCGCCCGGGTCGCCGT +
Preference number: 6 (lower is better)
Translates to: TRSSQGSTLEWL*SGVEVSRPGRR
Trigger: ACGGCGACCCGGGCGACTCACCTCCACTCCGCTCCAGAGCCATTCCAGCGTCGAGCCCTGGCTCGACCGGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS TCA 72 bp GGTGTCCCGAGTAGACACTGCGAGAGGGAAGGCTCGTaGGGCTCCGCCCGCCCACCCAGCACCCTGGGCACT +
Preference number: 6 (lower is better)
Translates to: GVPSRHCEREGS*GSARPPSTLGT
Trigger: AGTGCCCAGGGTGCTGGGTGGGCGGGCGGAGCCTCACGAGCCTTCCCTCTCGCAGTGTCTACTCGGGACACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS GCA 72 bp ATGGCAGGGACACCCCAACCACGCTGCGGTCCCAAGTaGCGCCACCCGCATGCACTCGCCACCCACCCCATG +
Preference number: 6 (lower is better)
Translates to: MAGTPQPRCGPK*RHPHALATHPM
Trigger: CATGGGGTGGGTGGCGAGTGCATGCGGGTGGCGGCACTTGGGACCGCAGCGTGGTTGGGGTGTCCCTGCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478105.5
CDS GCA 72 bp CGCTCATCCCTCGAGGCGGTGGGCCGAGACTTCTGCTaGTTGGGTGCAGCGGCCGTGGTTTGTGAGGGCCCA +
Preference number: 6 (lower is better)
Translates to: RSSLEAVGRDFC*LGAAAVVCEGP
Trigger: TGGGCCCTCACAAACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCCCACCGCCTCGAGGGATGAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS GCA 72 bp AGAATGCAGATCTATGTGGGTGTGGGCCTCGAGGCCTaGGAGTGCAGTGGTAGCGGCGGCCCCCGGCGTGGC +
Preference number: 6 (lower is better)
Translates to: RMQIYVGVGLEA*ECSGSGGPRRG
Trigger: GCCACGCCGGGGGCCGCCGCTACCACTGCACTCGCAGGCCTCGAGGCCCACACCCACATAGATCTGCATTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000651436.1
CDS GCA 72 bp CGCCTGGGTCAGAGCCCGGCACTGTGCCAGCAGGGATaGGTGGGACACTGTGACCCCCACCGTACTGCCTTC +
Preference number: 6 (lower is better)
Translates to: RLGQSPALCQQG*VGHCDPHRTAF
Trigger: GAAGGCAGTACGGTGGGGGTCACAGTGTCCCACGCATCCCTGCTGGCACAGTGCCGGGCTCTGACCCAGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS GCA 72 bp CCAACCACGCTGCGGTCCCAAGTGCCGCCACCCGCATaGACTCGCCACCCACCCCATGTGCTCACAGCAGCT +
Preference number: 6 (lower is better)
Translates to: PTTLRSQVPPPA*TRHPPHVLTAA
Trigger: AGCTGCTGTGAGCACATGGGGTGGGTGGCGAGTGCATGCGGGTGGCGGCACTTGGGACCGCAGCGTGGTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478105.5
CDS CCA 72 bp GGACATCTGACCGGAAGCGCTCATCCCTCGAGGCGGTaGGCCGAGACTTCTGCTGCTTGGGTGCAGCGGCCG +
Preference number: 6 (lower is better)
Translates to: GHLTGSAHPSRR*AETSAAWVQRP
Trigger: CGGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCCCACCGCCTCGAGGGATGAGCGCTTCCGGTCAGATGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS CCA 72 bp GGGATTTGGGCTGTGTTGTGCCCCAGCGCTGCAAGGTaGCCAACAGCGACGGCGGTCGGGGGACACCTGCAG +
Preference number: 6 (lower is better)
Translates to: GIWAVLCPSAAR*PTATAVGGHLQ
Trigger: CTGCAGGTGTCCCCCGACCGCCGTCGCTGTTGGCCACCTTGCAGCGCTGGGGCACAACACAGCCCAAATCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS CCA 72 bp GGCACTGGAGAGGAGGTGCACACTCTGACTCCACCATaGGGACCACGGAGTGGCGGTGCGCCTGGGGTGGAG +
Preference number: 6 (lower is better)
Translates to: GTGEEVHTLTPP*GPRSGGAPGVE
Trigger: CTCCACCCCAGGCGCACCGCCACTCCGTGGTCCCCATGGTGGAGTCAGAGTGTGCACCTCCTCTCCAGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480553.1
CDS TCA 72 bp TGGCCAACAGCGACGGCGGTCGGGGGACACCTGCAGTaGGAGGCTCCCCTCTCAGCACACTCGTCTCGCTTC +
Preference number: 6 (lower is better)
Translates to: WPTATAVGGHLQ*EAPLSAHSSRF
Trigger: GAAGCGAGACGAGTGTGCTGAGAGGGGAGCCTCTCACTGCAGGTGTCCCCCGACCGCCGTCGCTGTTGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS GCA 72 bp AAGCGCTCATCCCTCGAGGCGGTGGGCCGAGACTTCTaGTGCTTGGGTGCAGCGGCCGTGGTTTGTGAGGGC +
Preference number: 6 (lower is better)
Translates to: KRSSLEAVGRDF*CLGAAAVVCEG
Trigger: GCCCTCACAAACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCCCACCGCCTCGAGGGATGAGCGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS GCA 72 bp CAAGGTGGCCAACAGCGACGGCGGTCGGGGGACACCTaGAGTGAGAGGCTCCCCTCTCAGCACACTCGTCTC +
Preference number: 6 (lower is better)
Translates to: QGGQQRRRSGDT*SERLPSQHTRL
Trigger: GAGACGAGTGTGCTGAGAGGGGAGCCTCTCACTGCAGGTGTCCCCCGACCGCCGTCGCTGTTGGCCACCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS CCA 72 bp CATCCCTCGAGGCGGTGGGCCGAGACTTCTGCTGCTTaGGTGCAGCGGCCGTGGTTTGTGAGGGCCCAGGAA +
Preference number: 6 (lower is better)
Translates to: HPSRRWAETSAA*VQRPWFVRAQE
Trigger: TTCCTGGGCCCTCACAAACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCCCACCGCCTCGAGGGATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS CCA 72 bp GGCCACATGGGAGGTCAGGAACGGCCAGGACAAGGGTaGGGCTGCAACGAGGTGTCCCTTAGCCACACCCCC +
Preference number: 6 (lower is better)
Translates to: GHMGGQERPGQG*GCNEVSLSHTP
Trigger: GGGGGTGTGGCTAAGGGACACCTCGTTGCAGCCCCACCCTTGTCCTGGCCGTTCCTGACCTCCCATGTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494435.5
CDS CAA 72 bp TCATCCCTCGAGGCGGTGGGCCGAGACTTCTGCTGCTaGGGTGCAGCGGCCGTGGTTTGTGAGGGCCCAGGA +
Preference number: 6 (lower is better)
Translates to: SSLEAVGRDFCC*GAAAVVCEGPG
Trigger: TCCTGGGCCCTCACAAACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCCCACCGCCTCGAGGGATGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS CCA 72 bp ACGGTGCCCTTGGCGTTCAGCAGCAAGAACAGCGGGTaGTCAGGAGTGGTGTGGGCACGCCACTGCAGCACG +
Preference number: 6 (lower is better)
Translates to: TVPLAFSSKNSG*SGVVWARHCST
Trigger: CGTGCTGCAGTGGCGTGCCCACACCACTCCTGACCACCCGCTGTTCTTGCTGCTGAACGCCAAGGGCACCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS CCA 72 bp CCACTTGGCACTTGGAGTGGAGTGGGGGTGCCAGCTTaGGAGATTCACCGAACCATAGGCCGTGCCGGGGCG +
Preference number: 6 (lower is better)
Translates to: PLGTWSGVGVPA*EIHRTIGRAGA
Trigger: CGCCCCGGCACGGCCTATGGTTCGGTGAATCTCCCAAGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS CAA 90 bp GACAAGCCAACCACTTGGCACTTGGAGTGGAGTGGGGGTGCCAGCTaGGGAGATTCACCGAACCATAGGCCGTGCCGGGGCGCCCACCTG +
Preference number: 6 (lower is better)
Translates to: DKPTTWHLEWSGGAS*GDSPNHRPCRGAHL
Trigger: CAGGTGGGCGCCCCGGCACGGCCTATGGTTCGGTGAATCTCCCAAGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS TCA 72 bp GCTCGACGCTGGAATGGCTCTGGAGCGGAGTGGAGGTaGGTCGCCCGGGTCGCCGTAAAGAGCCCTCATCTT +
Preference number: 6 (lower is better)
Translates to: ARRWNGSGAEWR*VARVAVKSPHL
Trigger: AAGATGAGGGCTCTTTACGGCGACCCGGGCGACTCACCTCCACTCCGCTCCAGAGCCATTCCAGCGTCGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS TCA 72 bp CCGCTCCTCGGCGACCACCATGCACGTGCGCACACATaGCAGGTTCACCCCCTTCATCCTGAGGACACCCGT +
Preference number: 6 (lower is better)
Translates to: PLLGDHHARAHT*QVHPLHPEDTR
Trigger: ACGGGTGTCCTCAGGATGAAGGGGGTGAACCTGTCATGTGTGCGCACGTGCATGGTGGTCGCCGAGGAGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000472364.1
ENST00000481883.1
ENST00000651436.1
CDS TCA 72 bp CAGGGTGAAGGTTGGGGGATGGCAGGCACGGGGTTCTaGGCTCTGCTCCGAACACTTGGAGAGGATCCGGGG +
Preference number: 6 (lower is better)
Translates to: QGEGWGMAGTGF*ALLRTLGEDPG
Trigger: CCCCGGATCCTCTCCAAGTGTTCGGAGCAGAGCTCAGAACCCCGTGCCTGCCATCCCCCAACCTTCACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS TCA 72 bp GCAGGCCCTGCCTGGCTCAGGTGTGGACCAAGAGAATaGGAGGCTCTGGGGGTGCTCAAAGGTGGGGTGACC +
Preference number: 6 (lower is better)
Translates to: AGPAWLRCGPRE*EALGVLKGGVT
Trigger: GGTCACCCCACCTTTGAGCACCCCCAGAGCCTCTCATTCTCTTGGTCCACACCTGAGCCAGGCAGGGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480553.1
CDS GCA 72 bp GCAGCCTCCTTGGACCTGAGCAGCCGTGTGACAGCCTaGGTGGTGAGGACGCATGCAGACTTGCTGACCTCC +
Preference number: 6 (lower is better)
Translates to: AASLDLSSRVTA*VVRTHADLLTS
Trigger: GGAGGTCAGCAAGTCTGCATGCGTCCTCACCACGCAGGCTGTCACACGGCTGCTCAGGTCCAAGGAGGCTGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000472364.1
ENST00000651436.1
CDS GCA 72 bp TCAGCGCAATCCTGGGCCGCTCCTCGGCGACCACCATaGACGTGCGCACACATGACAGGTTCACCCCCTTCA +
Preference number: 6 (lower is better)
Translates to: SAQSWAAPRRPP*TCAHMTGSPPS
Trigger: TGAAGGGGGTGAACCTGTCATGTGTGCGCACGTGCATGGTGGTCGCCGAGGAGCGGCCCAGGATTGCGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000472364.1
ENST00000481883.1
ENST00000651436.1
CDS CCA 72 bp CTTGGGAGTCCTGCAGAGAGTGAGCTCAGACGGGAGTaGGGCCGTGACGATGCAGGCTGTGCGTGCTCAGGA +
Preference number: 6 (lower is better)
Translates to: LGSPAESELRRE*GRDDAGCACSG
Trigger: TCCTGAGCACGCACAGCCTGCATCGTCACGGCCCCACTCCCGTCTGAGCTCACTCTCTGCAGGACTCCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS CCA 72 bp GCCTGTGTGCAGGACTGTGCACCAGTCTCGGAGGTGTaGATGGCCCTGCACACAGGTAGGGTGATGGGCAGG +
Preference number: 6 (lower is better)
Translates to: ACVQDCAPVSEV*MALHTGRVMGR
Trigger: CCTGCCCATCACCCTACCTGTGTGCAGGGCCATCCACACCTCCGAGACTGGTGCACAGTCCTGCACACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494435.5
CDS CAA 72 bp ACCACTTGGCACTTGGAGTGGAGTGGGGGTGCCAGCTaGGGAGATTCACCGAACCATAGGCCGTGCCGGGGC +
Preference number: 6 (lower is better)
Translates to: TTWHLEWSGGAS*GDSPNHRPCRG
Trigger: GCCCCGGCACGGCCTATGGTTCGGTGAATCTCCCAAGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS CAA 90 bp CGGAAGCGCTCATCCCTCGAGGCGGTGGGCCGAGACTTCTGCTGCTaGGGTGCAGCGGCCGTGGTTTGTGAGGGCCCAGGAATTCTATTC +
Preference number: 6 (lower is better)
Translates to: RKRSSLEAVGRDFCC*GAAAVVCEGPGILF
Trigger: GAATAGAATTCCTGGGCCCTCACAAACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCCCACCGCCTCGAGGGATGAGCGCTTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS CAA 90 bp CCAGTCCCTGTGTCCTGGGCCAGAGGGTGCCAGTCCTTTGGGGGCTaGGCTAGATGCTTCCCATCAATCACTAGCCAGGAGAGCGGGGGC +
Preference number: 6 (lower is better)
Translates to: PVPVSWARGCQSFGG*ARCFPSITSQESGG
Trigger: GCCCCCGCTCTCCTGGCTAGTGATTGATGGGAAGCATCTAGCCAAGCCCCCAAAGGACTGGCACCCTCTGGCCCAGGACACAGGGACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS CAA 90 bp AACAAAGCTGGAGCCAGGGAGGACCGGGCGGGACAAGCCAACCACTaGGCACTTGGAGTGGAGTGGGGGTGCCAGCTTGGGAGATTCACC +
Preference number: 6 (lower is better)
Translates to: NKAGAREDRAGQANH*ALGVEWGCQLGRFT
Trigger: GGTGAATCTCCCAAGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS TCA 72 bp GACCAGCATCACCTGAGGCTTCCCCAGAGGAGGTACTaGGTCAGACCCTGGACAGTCCTGGGCCCCAGAGCT +
Preference number: 6 (lower is better)
Translates to: DQHHLRLPQRRY*VRPWTVLGPRA
Trigger: AGCTCTGGGGCCCAGGACTGTCCAGGGTCTGACTCAGTACCTCCTCTGGGGAAGCCTCAGGTGATGCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480553.1
CDS GCA 72 bp GCCAGAGGGTGCCAGTCCTTTGGGGGCTTGGCTAGATaGTTCCCATCAATCACTAGCCAGGAGAGCGGGGGC +
Preference number: 6 (lower is better)
Translates to: ARGCQSFGGLAR*FPSITSQESGG
Trigger: GCCCCCGCTCTCCTGGCTAGTGATTGATGGGAAGCATCTAGCCAAGCCCCCAAAGGACTGGCACCCTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS GCA 72 bp GGGCTCCACGGCCAGTGCGGTGGCCACAACGTCATCTaGATTGTGTCTGCGAACTCCAGTGACCATCAGCCC +
Preference number: 6 (lower is better)
Translates to: GLHGQCGGHNVI*IVSANSSDHQP
Trigger: GGGCTGATGGTCACTGGAGTTCGCAGACACAATGCAGATGACGTTGTGGCCACCGCACTGGCCGTGGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000480553.1
ENST00000651436.1
CDS GCA 72 bp ATGGGAGGTCAGGAACGGCCAGGACAAGGGTGGGGCTaGAACGAGGTGTCCCTTAGCCACACCCCCTACCTT +
Preference number: 6 (lower is better)
Translates to: MGGQERPGQGWG*NEVSLSHTPYL
Trigger: AAGGTAGGGGGTGTGGCTAAGGGACACCTCGTTGCAGCCCCACCCTTGTCCTGGCCGTTCCTGACCTCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494435.5
CDS CCA 72 bp ACCTTGGACTGCTGGGGCTCATTCATCTCCGGCACCTaGGCCGGTGTGCTGCGCTCACATGTTGTAGGCGAC +
Preference number: 6 (lower is better)
Translates to: TLDCWGSFISGT*AGVLRSHVVGD
Trigger: GTCGCCTACAACATGTGAGCGCAGCACACCGGCCCAGGTGCCGGAGATGAATGAGCCCCAGCAGTCCAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000478105.5
ENST00000479654.1
ENST00000651436.1
CDS CCA 72 bp ACCGGGCGGGACAAGCCAACCACTTGGCACTTGGAGTaGAGTGGGGGTGCCAGCTTGGGAGATTCACCGAAC +
Preference number: 6 (lower is better)
Translates to: TGRDKPTTWHLE*SGGASLGDSPN
Trigger: GTTCGGTGAATCTCCCAAGCTGGCACCCCCACTCCACTCCAAGTGCCAAGTGGTTGGCTTGTCCCGCCCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457905.7
CDS CCA 72 bp GGCAGGCACGGGGTTCTGAGCTCTGCTCCGAACACTTaGAGAGGATCCGGGGACACCACTCCAGAGGCATTC +
Preference number: 6 (lower is better)
Translates to: GRHGVLSSAPNT*RGSGDTTPEAF
Trigger: GAATGCCTCTGGAGTGGTGTCCCCGGATCCTCTCCAAGTGTTCGGAGCAGAGCTCAGAACCCCGTGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS TCA 72 bp CATACAGTGCATCGTGCCGCCCTCCACTGGCATCAGTaGGCTCTGTTCGCCGAAGGAAGCCAAGGTAGCCGG +
Preference number: 6 (lower is better)
Translates to: HTVHRAALHWHQ*ALFAEGSQGSR
Trigger: CCGGCTACCTTGGCTTCCTTCGGCGAACAGAGCTCACTGATGCCAGTGGAGGGCGGCACGATGCACTGTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000478105.5
ENST00000479654.1
ENST00000651436.1
CDS TCA 72 bp CCAGCTCCACCACCACCACCAGCAGGTTGGTCCAGGTaGATACGGCACACTCAGCGATGCTCCTGTGTGCTC +
Preference number: 6 (lower is better)
Translates to: PAPPPPPAGWSR*IRHTQRCSCVL
Trigger: GAGCACACAGGAGCATCGCTGAGTGTGCCGTATTCACCTGGACCAACCTGCTGGTGGTGGTGGTGGAGCTGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000478105.5
ENST00000479654.1
ENST00000651436.1
CDS GCA 72 bp GGTGCTGCATGTGGTGGGAGACAAGCTGCACGGCACTaGAAGGATCAGGTGCAGCAACAGGGGAGTGCCATG +
Preference number: 6 (lower is better)
Translates to: GAACGGRQAARH*KDQVQQQGSAM
Trigger: CATGGCACTCCCCTGTTGCTGCACCTGATCCTTGCAGTGCCGTGCAGCTTGTCTCCCACCACATGCAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480553.1
CDS CCA 72 bp AGGCCCGATGAAGCCCAGCAGGCCTGTCCTGGTGAATaGCCTGTCAAAGATGGGTGCTCCTCCTGTGGTGAC +
Preference number: 6 (lower is better)
Translates to: RPDEAQQACPGE*PVKDGCSSCGD
Trigger: GTCACCACAGGAGGAGCACCCATCTTTGACAGGCCATTCACCAGGACAGGCCTGCTGGGCTTCATCGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000480553.1
ENST00000494435.5
ENST00000651436.1
CDS CCA 72 bp GCAGGAACCAGGGCCAGACAGTACACGCCCACCTGGTaGATGCTATCAATGGCCTGCAGCACACGGCTCATC +
Preference number: 6 (lower is better)
Translates to: AGTRARQYTPTW*MLSMACSTRLI
Trigger: GATGAGCCGTGTGCTGCAGGCCATTGATAGCATCCACCAGGTGGGCGTGTACTGTCTGGCCCTGGTTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS CCA 72 bp GAAGCGCCTCCTCCCCGTAAACGGTGTAGTACCCGGTaGCATTGTGGGGGCTGCTTACCCAGATCTCTCCCA +
Preference number: 6 (lower is better)
Translates to: EAPPPRKRCSTR*HCGGCLPRSLP
Trigger: TGGGAGAGATCTGGGTAAGCAGCCCCCACAATGCCACCGGGTACTACACCGTTTACGGGGAGGAGGCGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000478105.5
ENST00000479654.1
ENST00000651436.1
CDS CAA 72 bp TCCACGGCCAGTGCGGTGGCCACAACGTCATCTGCATaGTGTCTGCGAACTCCAGTGACCATCAGCCCGTCC +
Preference number: 6 (lower is better)
Translates to: STASAVATTSSA*CLRTPVTISPS
Trigger: GGACGGGCTGATGGTCACTGGAGTTCGCAGACACAATGCAGATGACGTTGTGGCCACCGCACTGGCCGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000480553.1
ENST00000651436.1
CDS CAA 90 bp TTCATGGGCTCCACGGCCAGTGCGGTGGCCACAACGTCATCTGCATaGTGTCTGCGAACTCCAGTGACCATCAGCCCGTCCAGTTTGCCC +
Preference number: 6 (lower is better)
Translates to: FMGSTASAVATTSSA*CLRTPVTISPSSLP
Trigger: GGGCAAACTGGACGGGCTGATGGTCACTGGAGTTCGCAGACACAATGCAGATGACGTTGTGGCCACCGCACTGGCCGTGGAGCCCATGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000480553.1
ENST00000651436.1
CDS TCA 72 bp GACAGTCCTGGGCCCCAGAGCTCACGTGTGCAGCCTTaGCAAAGCAGTTCCCATTCAGACCACCGTACGCAG +
Preference number: 6 (lower is better)
Translates to: DSPGPQSSRVQP*QSSSHSDHRTQ
Trigger: CTGCGTACGGTGGTCTGAATGGGAACTGCTTTGTCAAGGCTGCACACGTGAGCTCTGGGGCCCAGGACTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480553.1
CDS GCA 72 bp CTCACAGAAGCCACCTGTGGACGCTCAAAGTACGAATaGTCCACGAGGCCCGTGGTGACATCAGGAGGGGCA +
Preference number: 6 (lower is better)
Translates to: LTEATCGRSKYE*STRPVVTSGGA
Trigger: TGCCCCTCCTGATGTCACCACGGGCCTCGTGGAGCATTCGTACTTTGAGCGTCCACAGGTGGCTTCTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000473752.5
ENST00000651436.1
CDS GCA 72 bp CAGGGACACCATCTGCTGTTTCCAGCATGCTCCCGCTaGACCCCCGAGGAACACTTCTCACAGAAGCCACCT +
Preference number: 6 (lower is better)
Translates to: QGHHLLFPACSR*TPEEHFSQKPP
Trigger: AGGTGGCTTCTGTGAGAAGTGTTCCTCGGGGGTGCAGCGGGAGCATGCTGGAAACAGCAGATGGTGTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS GCA 72 bp GAACCAGGGCCAGACAGTACACGCCCACCTGGTGGATaGTATCAATGGCCTGCAGCACACGGCTCATCCACT +
Preference number: 6 (lower is better)
Translates to: EPGPDSTRPPGG*YQWPAAHGSST
Trigger: AGTGGATGAGCCGTGTGCTGCAGGCCATTGATAGCATCCACCAGGTGGGCGTGTACTGTCTGGCCCTGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS GCA 72 bp GAGCAGCCGTGTGACAGCCTGCGTGGTGAGGACGCATaGAGACTTGCTGACCTCCACGATCATCTTGACGGT +
Preference number: 6 (lower is better)
Translates to: EQPCDSLRGEDA*RLADLHDHLDG
Trigger: ACCGTCAAGATGATCGTGGAGGTCAGCAAGTCTGCATGCGTCCTCACCACGCAGGCTGTCACACGGCTGCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000472364.1
ENST00000651436.1
CDS GCA 72 bp AGACCCTGGACAGTCCTGGGCCCCAGAGCTCACGTGTaGAGCCTTGACAAAGCAGTTCCCATTCAGACCACC +
Preference number: 6 (lower is better)
Translates to: RPWTVLGPRAHV*SLDKAVPIQTT
Trigger: GGTGGTCTGAATGGGAACTGCTTTGTCAAGGCTGCACACGTGAGCTCTGGGGCCCAGGACTGTCCAGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480553.1
CDS GCA 72 bp ACTGGGACTCAAAGCCCGCAAGGTCTGGGATCCCACTaGATCCTTAGGGAAAACCCAGCGACCCCCAGCCTT +
Preference number: 6 (lower is better)
Translates to: TGTQSPQGLGSH*ILRENPATPSL
Trigger: AAGGCTGGGGGTCGCTGGGTTTTCCCTAAGGATGCAGTGGGATCCCAGACCTTGCGGGCTTTGAGTCCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472364.1
CDS CCA 72 bp GTCCCGACCACAGCAAGAATAGCTGTGGACGGGCTCTaGGTTCTGCGTGCTTCATCAAGTTCTCGTGGCCCC +
Preference number: 6 (lower is better)
Translates to: VPTTARIAVDGL*VLRASSSSRGP
Trigger: GGGGCCACGAGAACTTGATGAAGCACGCAGAACCCAGAGCCCGTCCACAGCTATTCTTGCTGTGGTCGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS CAA 72 bp ATGACCTCTGGCCTCAGACCTCTGGACTGGAAGACGTaGAGGAAGGCGTCACAGGAGGAGATCGACCACGGG +
Preference number: 6 (lower is better)
Translates to: MTSGLRPLDWKT*RKASQEEIDHG
Trigger: CCCGTGGTCGATCTCCTCCTGTGACGCCTTCCTCAACGTCTTCCAGTCCAGAGGTCTGAGGCCAGAGGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS CAA 72 bp GGACAGTCCTGGGCCCCAGAGCTCACGTGTGCAGCCTaGACAAAGCAGTTCCCATTCAGACCACCGTACGCA +
Preference number: 6 (lower is better)
Translates to: GQSWAPELTCAA*TKQFPFRPPYA
Trigger: TGCGTACGGTGGTCTGAATGGGAACTGCTTTGTCAAGGCTGCACACGTGAGCTCTGGGGCCCAGGACTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480553.1
CDS CAA 90 bp AACGCTCTGGGCTTTCACAGGCAAGAGGCGACACATGATTTGTCCTaGGGAGTCCTGCAGAGAGTGAGCTCAGACGGGAGTGGGGCCGTG +
Preference number: 6 (lower is better)
Translates to: NALGFHRQEATHDLS*GVLQRVSSDGSGAV
Trigger: CACGGCCCCACTCCCGTCTGAGCTCACTCTCTGCAGGACTCCCAAGGACAAATCATGTGTCGCCTCTTGCCTGTGAAAGCCCAGAGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS CAA 90 bp GATCTTGGCTCGCTGCAACCTCCTCTTGCCAGGTTCAAGCGATTCTaGTGCCTCAACCTCCCAAGTAGCCGGGACAACAGGCGCGCACCA +
Preference number: 6 (lower is better)
Translates to: DLGSLQPPLARFKRF*CLNLPSSRDNRRAP
Trigger: TGGTGCGCGCCTGTTGTCCCGGCTACTTGGGAGGTTGAGGCACAAGAATCGCTTGAACCTGGCAAGAGGAGGTTGCAGCGAGCCAAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS CAA 90 bp TCTGCATTGTGTCTGCGAACTCCAGTGACCATCAGCCCGTCCAGTTaGCCCACGATGAAGACCAGGTTGTCAGGCCCGATGAAGCCCAGC +
Preference number: 6 (lower is better)
Translates to: SALCLRTPVTISPSS*PTMKTRLSGPMKPS
Trigger: GCTGGGCTTCATCGGGCCTGACAACCTGGTCTTCATCGTGGGCAAACTGGACGGGCTGATGGTCACTGGAGTTCGCAGACACAATGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000480553.1
ENST00000651436.1
CDS TCA 72 bp CCTTCACTCCCGCTAATATCCCAGTGGTTGACACGCTaGAGTCCAAGTATGCGAGGACATCGGGGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: PSLPLISQWLTR*SPSMRGHRGRG
Trigger: CCCCCTCCCCCGATGTCCTCGCATACTTGGACTTCAGCGTGTCAACCACTGGGATATTAGCGGGAGTGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS GCA 72 bp CAGGCCTGTCCTGGTGAATGGCCTGTCAAAGATGGGTaGTCCTCCTGTGGTGACCGGAACTGCCTCAAACAC +
Preference number: 6 (lower is better)
Translates to: QACPGEWPVKDG*SSCGDRNCLKH
Trigger: GTGTTTGAGGCAGTTCCGGTCACCACAGGAGGAGCACCCATCTTTGACAGGCCATTCACCAGGACAGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000480553.1
ENST00000494435.5
ENST00000651436.1
CDS GCA 72 bp CTGCAACCTCCTCTTGCCAGGTTCAAGCGATTCTTGTaGCTCAACCTCCCAAGTAGCCGGGACAACAGGCGC +
Preference number: 6 (lower is better)
Translates to: LQPPLARFKRFL*LNLPSSRDNRR
Trigger: GCGCCTGTTGTCCCGGCTACTTGGGAGGTTGAGGCACAAGAATCGCTTGAACCTGGCAAGAGGAGGTTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS CCA 72 bp TGGGCCGAGACTTCTGCTGCTTGGGTGCAGCGGCCGTaGTTTGTGAGGGCCCAGGAATTCTATTCTCTGCTT +
Preference number: 6 (lower is better)
Translates to: WAETSAAWVQRP*FVRAQEFYSLL
Trigger: AAGCAGAGAATAGAATTCCTGGGCCCTCACAAACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS CCA 72 bp TGTCCTGGGCCAGAGGGTGCCAGTCCTTTGGGGGCTTaGCTAGATGCTTCCCATCAATCACTAGCCAGGAGA +
Preference number: 6 (lower is better)
Translates to: CPGPEGASPLGA*LDASHQSLARR
Trigger: TCTCCTGGCTAGTGATTGATGGGAAGCATCTAGCCAAGCCCCCAAAGGACTGGCACCCTCTGGCCCAGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS CCA 72 bp TTTGTTAATGTTTCAGCTTCTGAGTACCCGCACGCCTaGGTCAGAGCCCGGCACTGTGCCAGCAGGGATGCG +
Preference number: 6 (lower is better)
Translates to: FVNVSASEYPHA*VRARHCASRDA
Trigger: CGCATCCCTGCTGGCACAGTGCCGGGCTCTGACCCAGGCGTGCGGGTACTCAGAAGCTGAAACATTAACAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS CCA 72 bp CTTCACGCCGGGGAGGATCTTTCCAGACTCCATCAATaGCAGGCTGTGCGGAGAACCCCGTTCTACCAAACG +
Preference number: 6 (lower is better)
Translates to: LHAGEDLSRLHQ*QAVRRTPFYQT
Trigger: CGTTTGGTAGAACGGGGTTCTCCGCACAGCCTGCCATTGATGGAGTCTGGAAAGATCCTCCCCGGCGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000478105.5
ENST00000651436.1
CDS CCA 72 bp ATGAGTCAGGGCCCCATCAGGACAGAACCTGAGATCTaGACTGGGACTCAAAGCCCGCAAGGTCTGGGATCC +
Preference number: 6 (lower is better)
Translates to: MSQGPIRTEPEI*TGTQSPQGLGS
Trigger: GGATCCCAGACCTTGCGGGCTTTGAGTCCCAGTCCAGATCTCAGGTTCTGTCCTGATGGGGCCCTGACTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472364.1
CDS CAA 72 bp TGTCTGCGAACTCCAGTGACCATCAGCCCGTCCAGTTaGCCCACGATGAAGACCAGGTTGTCAGGCCCGATG +
Preference number: 6 (lower is better)
Translates to: CLRTPVTISPSS*PTMKTRLSGPM
Trigger: CATCGGGCCTGACAACCTGGTCTTCATCGTGGGCAAACTGGACGGGCTGATGGTCACTGGAGTTCGCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000480553.1
ENST00000651436.1
CDS CAA 72 bp ATGACCTCTGGCCTCAGACCTCTGGACTGGAAGACGTaGAGGAAGGCGTCACAGGAGGAGATCGACCCTGCA +
Preference number: 6 (lower is better)
Translates to: MTSGLRPLDWKT*RKASQEEIDPA
Trigger: TGCAGGGTCGATCTCCTCCTGTGACGCCTTCCTCAACGTCTTCCAGTCCAGAGGTCTGAGGCCAGAGGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480553.1
CDS CAA 90 bp GACACAGGTTGCAGTGCTTGTGACGGTGCCCTAGGAAAGCGATCTTaGAGCTCATCTGTATGCTGGTGCGTGCAGGTGGGCTGTTCGCAG +
Preference number: 6 (lower is better)
Translates to: DTGCSACDGALGKRS*SSSVCWCVQVGCSQ
Trigger: CTGCGAACAGCCCACCTGCACGCACCAGCATACAGATGAGCTCAAAGATCGCTTTCCTAGGGCACCGTCACAAGCACTGCAACCTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472364.1
CDS TCA 72 bp GACGCTCAAAGTACGAATGCTCCACGAGGCCCGTGGTaGCATCAGGAGGGGCAGAATGCAGATCTATGTGGG +
Preference number: 6 (lower is better)
Translates to: DAQSTNAPRGPW*HQEGQNADLCG
Trigger: CCCACATAGATCTGCATTCTGCCCCTCCTGATGTCACCACGGGCCTCGTGGAGCATTCGTACTTTGAGCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000651436.1
CDS TCA 72 bp TCTTCACTCCCGCTAATATCCCAGTGGTTGACACGCTaGAGTCCAAGTATGCGAGGACATCGGGGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: SSLPLISQWLTR*SPSMRGHRGRG
Trigger: CCCCCTCCCCCGATGTCCTCGCATACTTGGACTTCAGCGTGTCAACCACTGGGATATTAGCGGGAGTGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000472364.1
ENST00000651436.1
CDS GCA 72 bp AGCAAGAATAGCTGTGGACGGGCTCTGGGTTCTGCGTaGTTCATCAAGTTCTCGTGGCCCCATGAGCCAGAC +
Preference number: 6 (lower is better)
Translates to: SKNSCGRALGSA*FIKFSWPHEPD
Trigger: GTCTGGCTCATGGGGCCACGAGAACTTGATGAAGCACGCAGAACCCAGAGCCCGTCCACAGCTATTCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS GCA 72 bp GACGTTGAGGAAGGCGTCACAGGAGGAGATCGACCCTaGACAGAGCAACAAGAGTGGAACGCCAGCACTAAC +
Preference number: 6 (lower is better)
Translates to: DVEEGVTGGDRP*TEQQEWNASTN
Trigger: GTTAGTGCTGGCGTTCCACTCTTGTTGCTCTGTGCAGGGTCGATCTCCTCCTGTGACGCCTTCCTCAACGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480553.1
CDS GCA 72 bp ACAACAGTCAGGATGTCAACCTTTCCACAGCACACCTaGCATGAATGGCAGGGACACCCCAACCACGCTGCG +
Preference number: 6 (lower is better)
Translates to: TTVRMSTFPQHT*HEWQGHPNHAA
Trigger: CGCAGCGTGGTTGGGGTGTCCCTGCCATTCATGGCAGGTGTGCTGTGGAAAGGTTGACATCCTGACTGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478105.5
CDS GCA 72 bp CCTGAATTGTACTACTTTCCATGCCCACAGGTCACCTaGACTGAGCCTGGGCGTGTGTCATCTGCAACCGGC +
Preference number: 6 (lower is better)
Translates to: PELYYFPCPQVT*TEPGRVSSATG
Trigger: GCCGGTTGCAGATGACACACGCCCAGGCTCAGTGCAGGTGACCTGTGGGCATGGAAAGTAGTACAATTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472364.1
CDS GCA 72 bp GGTGCCCTAGGAAAGCGATCTTTGAGCTCATCTGTATaGTGGTGCGTGCAGGTGGGCTGTTCGCAGATCTGC +
Preference number: 6 (lower is better)
Translates to: GALGKRSLSSSV*WCVQVGCSQIC
Trigger: GCAGATCTGCGAACAGCCCACCTGCACGCACCAGCATACAGATGAGCTCAAAGATCGCTTTCCTAGGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472364.1
CDS CAA 72 bp TCGCTGCAACCTCCTCTTGCCAGGTTCAAGCGATTCTaGTGCCTCAACCTCCCAAGTAGCCGGGACAACAGG +
Preference number: 6 (lower is better)
Translates to: SLQPPLARFKRF*CLNLPSSRDNR
Trigger: CCTGTTGTCCCGGCTACTTGGGAGGTTGAGGCACAAGAATCGCTTGAACCTGGCAAGAGGAGGTTGCAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS CAA 72 bp TGCAGTGCTTGTGACGGTGCCCTAGGAAAGCGATCTTaGAGCTCATCTGTATGCTGGTGCGTGCAGGTGGGC +
Preference number: 6 (lower is better)
Translates to: CSACDGALGKRS*SSSVCWCVQVG
Trigger: GCCCACCTGCACGCACCAGCATACAGATGAGCTCAAAGATCGCTTTCCTAGGGCACCGTCACAAGCACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472364.1
CDS CAA 90 bp ATTCTGAACGCTCTGGGCTTTCACAGGCAAGAGGCGACACATGATTaGTCCTTGGGAGTCCTGCAGAGAGTGAGCTCAGACGGGAGTGGG +
Preference number: 6 (lower is better)
Translates to: ILNALGFHRQEATHD*SLGVLQRVSSDGSG
Trigger: CCCACTCCCGTCTGAGCTCACTCTCTGCAGGACTCCCAAGGACAAATCATGTGTCGCCTCTTGCCTGTGAAAGCCCAGAGCGTTCAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS TCA 72 bp AGACTTCTGCTGCTTGGGTGCAGCGGCCGTGGTTTGTaGGGGCCCAGGAATTCTATTCTCTGCTTGCAGAGA +
Preference number: 6 (lower is better)
Translates to: RLLLLGCSGRGL*GPRNSILCLQR
Trigger: TCTCTGCAAGCAGAGAATAGAATTCCTGGGCCCTCACAAACCACGGCCGCTGCACCCAAGCAGCAGAAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS TCA 72 bp GACGCTCAAAGTACGAATGCTCCACGAGGCCCGTGGTaGCATCAGGAGGGGCAGAATGCAGATCTGCTTTTG +
Preference number: 6 (lower is better)
Translates to: DAQSTNAPRGPW*HQEGQNADLLL
Trigger: CAAAAGCAGATCTGCATTCTGCCCCTCCTGATGTCACCACGGGCCTCGTGGAGCATTCGTACTTTGAGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473752.5
CDS TCA 72 bp GACGAGGCAGGGCGAAGAGGGGAGGCATCACGTCACTaGCCAGTAGGAAAGATTAGAGGACTAGGGATTTGC +
Preference number: 6 (lower is better)
Translates to: DEAGRRGEASRH*PVGKIRGLGIC
Trigger: GCAAATCCCTAGTCCTCTAATCTTTCCTACTGGTCAGTGACGTGATGCCTCCCCTCTTCGCCCTGCCTCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS GCA 72 bp GGGAGGATCTTTCCAGACTCCATCAATGGCAGGCTGTaGGGAGAACCCCGTTCTACCAAACGAACCCTGTCA +
Preference number: 6 (lower is better)
Translates to: GRIFPDSINGRL*GEPRSTKRTLS
Trigger: TGACAGGGTTCGTTTGGTAGAACGGGGTTCTCCGCACAGCCTGCCATTGATGGAGTCTGGAAAGATCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS GCA 72 bp AGACGGGAGTGGGGCCGTGACGATGCAGGCTGTGCGTaGTCAGGAAAGCGTATTTCATTCTTCATGGAAACG +
Preference number: 6 (lower is better)
Translates to: RREWGRDDAGCA*SGKRISFFMET
Trigger: CGTTTCCATGAAGAATGAAATACGCTTTCCTGAGCACGCACAGCCTGCATCGTCACGGCCCCACTCCCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS GCA 72 bp AAACGGCACATTAACAACTGGGAAACTGGGTCTCCATaGTGCCAACAGCCAGCTTTCGAGAACCGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: KRHINNWETGSP*CQQPAFENRSP
Trigger: GGGGCTGCGGTTCTCGAAAGCTGGCTGTTGGCAGCATGGAGACCCAGTTTCCCAGTTGTTAATGTGCCGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472364.1
ENST00000481883.1
CDS GCA 72 bp CTAGGAAAGCGATCTTTGAGCTCATCTGTATGCTGGTaGGTGCAGGTGGGCTGTTCGCAGATCTGCGTGCAC +
Preference number: 6 (lower is better)
Translates to: LGKRSLSSSVCW*VQVGCSQICVH
Trigger: GTGCACGCAGATCTGCGAACAGCCCACCTGCACGCACCAGCATACAGATGAGCTCAAAGATCGCTTTCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472364.1
CDS CCA 72 bp TGGTTTCAGAAATGTGAATCCCTCCGAGAGGAGCCTTaGGCAAGGTGTTGGCAGGAACCAGGGCCAGACAGT +
Preference number: 6 (lower is better)
Translates to: WFQKCESLREEP*ARCWQEPGPDS
Trigger: ACTGTCTGGCCCTGGTTCCTGCCAACACCTTGCCCAAGGCTCCTCTCGGAGGGATTCACATTTCTGAAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000651436.1
CDS CAA 72 bp TGCAGTGGTGAGATCTTGGCTCGCTGCAACCTCCTCTaGCCAGGTTCAAGCGATTCTTGTGCCTCAACCTCC +
Preference number: 6 (lower is better)
Translates to: CSGEILARCNLL*PGSSDSCASTS
Trigger: GGAGGTTGAGGCACAAGAATCGCTTGAACCTGGCAAGAGGAGGTTGCAGCGAGCCAAGATCTCACCACTGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS TCA 72 bp ATTGTACTACTTTCCATGCCCACAGGTCACCTGCACTaGGCCTGGGCGTGTGTCATCTGCAACCGGCTTTCT +
Preference number: 6 (lower is better)
Translates to: IVLLSMPTGHLH*AWACVICNRLS
Trigger: AGAAAGCCGGTTGCAGATGACACACGCCCAGGCTCAGTGCAGGTGACCTGTGGGCATGGAAAGTAGTACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472364.1
CDS TCA 72 bp CCCTTTTGTGCAGCTGGACACAGGTTGCAGTGCTTGTaGCGGTGCCCTAGGAAAGCGATCTTTGAGCTCATC +
Preference number: 6 (lower is better)
Translates to: PFCAAGHRLQCL*RCPRKAIFELI
Trigger: GATGAGCTCAAAGATCGCTTTCCTAGGGCACCGTCACAAGCACTGCAACCTGTGTCCAGCTGCACAAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472364.1
CDS GCA 72 bp GGCATCTTCCTCTCTTTGTATTTGGCCAAAGCTGCTTaGACGGCTTCAGTGTGGACATCTGACCGGAAGCGC +
Preference number: 6 (lower is better)
Translates to: GIFLSLYLAKAA*TASVWTSDRKR
Trigger: GCGCTTCCGGTCAGATGTCCACACTGAAGCCGTGCAAGCAGCTTTGGCCAAATACAAAGAGAGGAAGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS GCA 72 bp CAAGGCAAACAGAAATACCTGGTAACCCTACCTCTCTaGTCAGGACACTCATCCTCCCTGATCCCCTGCCAG +
Preference number: 6 (lower is better)
Translates to: QGKQKYLVTLPL*SGHSSSLIPCQ
Trigger: CTGGCAGGGGATCAGGGAGGATGAGTGTCCTGAGCAGAGAGGTAGGGTTACCAGGTATTTCTGTTTGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472364.1
CDS CCA 72 bp CAAGCTACAGTGTGGCCATACTTGAGAATCCAGGACTaGGATCTGAGCTTCAAAGCTGGGAGGGGCCCTGAT +
Preference number: 6 (lower is better)
Translates to: QATVWPYLRIQD*DLSFKAGRGPD
Trigger: ATCAGGGCCCCTCCCAGCTTTGAAGCTCAGATCCCAGTCCTGGATTCTCAAGTATGGCCACACTGTAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478105.5
CDS CAA 72 bp CATAACTTAGACCGTTCATCGACAGGACTGCTTTTCTaGGAGGTGGTCCTCCCAGATCAGGTGGCCTGCGGA +
Preference number: 6 (lower is better)
Translates to: HNLDRSSTGLLF*EVVLPDQVACG
Trigger: TCCGCAGGCCACCTGATCTGGGAGGACCACCTCCAAGAAAAGCAGTCCTGTCGATGAACGGTCTAAGTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000473752.5
ENST00000480553.1
ENST00000494435.5
ENST00000651436.1
CDS CAA 72 bp CCCCTCTCAGCACACTCGTCTCGCTTCCCTCAGGCTTaGGCTGATTTGGATCTGGTTGCTGAACTTCCAACA +
Preference number: 6 (lower is better)
Translates to: PLSAHSSRFPQA*ADLDLVAELPT
Trigger: TGTTGGAAGTTCAGCAACCAGATCCAAATCAGCCAAAGCCTGAGGGAAGCGAGACGAGTGTGCTGAGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS GCA 72 bp ACACATCTCATCGGCTTCCTGAGCACCCAGAAAAGGTaGCTTAGAAGGCCAAGGTTCCTAAGAGCCACACGA +
Preference number: 6 (lower is better)
Translates to: THLIGFLSTQKR*LRRPRFLRATR
Trigger: TCGTGTGGCTCTTAGGAACCTTGGCCTTCTAAGGCACCTTTTCTGGGTGCTCAGGAAGCCGATGAGATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS GCA 72 bp GGGAGGATCTTTCCAGACTCCATCAATGGCAGGCTGTaGGGAGAACCCCGTTCTACCAAACGAACCCTAAAA +
Preference number: 6 (lower is better)
Translates to: GRIFPDSINGRL*GEPRSTKRTLK
Trigger: TTTTAGGGTTCGTTTGGTAGAACGGGGTTCTCCGCACAGCCTGCCATTGATGGAGTCTGGAAAGATCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478105.5
CDS CCA 72 bp AGGGGAGAGGGTGGATGGCAGTGTCCGCTGTTCACATaGCTAGACCATAGCTCCGAACTACCAAACATCATA +
Preference number: 6 (lower is better)
Translates to: RGEGGWQCPLFT*LDHSSELPNII
Trigger: TATGATGTTTGGTAGTTCGGAGCTATGGTCTAGCCATGTGAACAGCGGACACTGCCATCCACCCTCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS CAA 90 bp ACAGAACGTCTCTTCGAAGGCATAGGCATCTTCCTCTCTTTGTATTaGGCCAAAGCTGCTTGCACGGCTTCAGTGTGGACATCTGACCGG +
Preference number: 6 (lower is better)
Translates to: TERLFEGIGIFLSLY*AKAACTASVWTSDR
Trigger: CCGGTCAGATGTCCACACTGAAGCCGTGCAAGCAGCTTTGGCCAAATACAAAGAGAGGAAGATGCCTATGCCTTCGAAGAGACGTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS GCA 72 bp ACGTGCATCCTGTTCATGACGCTTGTTAACACGCCATaGCACAGACCAGCATCCCTTTTGAAATCCAGCACG +
Preference number: 6 (lower is better)
Translates to: TCILFMTLVNTP*HRPASLLKSST
Trigger: CGTGCTGGATTTCAAAAGGGATGCTGGTCTGTGGCATGGCGTGTTAACAAGCGTCATGAACAGGATGCACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS CCA 72 bp ATAGATCAGGCGGCTACAAAACGGCACATTAACAACTaGGAAACTGGGTCTCCATGCTGCCAACAGCCAGCT +
Preference number: 6 (lower is better)
Translates to: IDQAATKRHINN*ETGSPCCQQPA
Trigger: AGCTGGCTGTTGGCAGCATGGAGACCCAGTTTCCCAGTTGTTAATGTGCCGTTTTGTAGCCGCCTGATCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472364.1
ENST00000481883.1
CDS CCA 72 bp GTTTCTCGATTGGTGGCTTCTACTGACAGAAGGCAGTaGAAGAGAGAGACCAGTGGACGCACTTATGTGCTG +
Preference number: 6 (lower is better)
Translates to: VSRLVASTDRRQ*KRETSGRTYVL
Trigger: CAGCACATAAGTGCGTCCACTGGTCTCTCTCTTCCACTGCCTTCTGTCAGTAGAAGCCACCAATCGAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472364.1
CDS CCA 72 bp AAAAGTGAAATGAAATTCAGGAGGGGAGAGGGTGGATaGCAGTGTCCGCTGTTCACATGGCTAGACCATAGC +
Preference number: 6 (lower is better)
Translates to: KSEMKFRRGEGG*QCPLFTWLDHS
Trigger: GCTATGGTCTAGCCATGTGAACAGCGGACACTGCCATCCACCCTCTCCCCTCCTGAATTTCATTTCACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS CAA 72 bp CTCTTCGAAGGCATAGGCATCTTCCTCTCTTTGTATTaGGCCAAAGCTGCTTGCACGGCTTCAGTGTGGACA +
Preference number: 6 (lower is better)
Translates to: LFEGIGIFLSLY*AKAACTASVWT
Trigger: TGTCCACACTGAAGCCGTGCAAGCAGCTTTGGCCAAATACAAAGAGAGGAAGATGCCTATGCCTTCGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS CAA 72 bp GAACGTCTCTTCGAAGGCATAGGCATCTTCCTCTCTTaGTATTTGGCCAAAGCTGCTTGCACGGCTTCAGTG +
Preference number: 6 (lower is better)
Translates to: ERLFEGIGIFLS*YLAKAACTASV
Trigger: CACTGAAGCCGTGCAAGCAGCTTTGGCCAAATACAAAGAGAGGAAGATGCCTATGCCTTCGAAGAGACGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS CAA 72 bp CCCCTCTCAGCACACTCGTCTCGCTTCCCTCAGGCTTaGGCTGATTTGGATCTTCCAACAATTCCTCAAAAT +
Preference number: 6 (lower is better)
Translates to: PLSAHSSRFPQA*ADLDLPTIPQN
Trigger: ATTTTGAGGAATTGTTGGAAGATCCAAATCAGCCAAAGCCTGAGGGAAGCGAGACGAGTGTGCTGAGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400274.5
CDS CAA 72 bp GCACACTCGTCTCGCTTCCCTCAGGCTTTGGCTGATTaGGATCTGGTTGCTGAACTTCCAACAATTCCTCAA +
Preference number: 6 (lower is better)
Translates to: AHSSRFPQALAD*DLVAELPTIPQ
Trigger: TTGAGGAATTGTTGGAAGTTCAGCAACCAGATCCAAATCAGCCAAAGCCTGAGGGAAGCGAGACGAGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS CAA 90 bp ACAAGGACAGAACGTCTCTTCGAAGGCATAGGCATCTTCCTCTCTTaGTATTTGGCCAAAGCTGCTTGCACGGCTTCAGTGTGGACATCT +
Preference number: 6 (lower is better)
Translates to: TRTERLFEGIGIFLS*YLAKAACTASVWTS
Trigger: AGATGTCCACACTGAAGCCGTGCAAGCAGCTTTGGCCAAATACAAAGAGAGGAAGATGCCTATGCCTTCGAAGAGACGTTCTGTCCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000651436.1
CDS CAA 90 bp GAAAGGGCAGATCATGACGTTGGAAATGATCACTCTGAGGGTCTGTaGACAACAGTCAGGATGTCAACCTTTCCACAGCACACCTGCCAT +
Preference number: 6 (lower is better)
Translates to: ERADHDVGNDHSEGL*TTVRMSTFPQHTCH
Trigger: ATGGCAGGTGTGCTGTGGAAAGGTTGACATCCTGACTGTTGTCAACAGACCCTCAGAGTGATCATTTCCAACGTCATGATCTGCCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478105.5
CDS CAA 90 bp ACTCCAGAGCAGACCAGTGTAACATCAAAACTCCCTGTTTCTCGATaGGTGGCTTCTACTGACAGAAGGCAGTGGAAGAGAGAGACCAGT +
Preference number: 6 (lower is better)
Translates to: TPEQTSVTSKLPVSR*VASTDRRQWKRETS
Trigger: ACTGGTCTCTCTCTTCCACTGCCTTCTGTCAGTAGAAGCCACCAATCGAGAAACAGGGAGTTTTGATGTTACACTGGTCTGCTCTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472364.1
CDS GCA 72 bp CGTGATTCCAAGCAATCCATAGTACGCTGTGCCAGTTaGACTGGAACTGACGCATATTTCTCCCACTTCATC +
Preference number: 6 (lower is better)
Translates to: RDSKQSIVRCAS*TGTDAYFSHFI
Trigger: GATGAAGTGGGAGAAATATGCGTCAGTTCCAGTGCAACTGGCACAGCGTACTATGGATTGCTTGGAATCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000480553.1
ENST00000494435.5
ENST00000651436.1
CDS CCA 72 bp CACACTCGTCTCGCTTCCCTCAGGCTTTGGCTGATTTaGATCTGGTTGCTGAACTTCCAACAATTCCTCAAA +
Preference number: 6 (lower is better)
Translates to: HTRLASLRLWLI*IWLLNFQQFLK
Trigger: TTTGAGGAATTGTTGGAAGTTCAGCAACCAGATCCAAATCAGCCAAAGCCTGAGGGAAGCGAGACGAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS CCA 72 bp AGGAAGATGGTATCTTTAAAGGAAATCAGACAGCCATaGATGGTCTGGTGCTCCAAAGGGCAGAAGGGGCAT +
Preference number: 6 (lower is better)
Translates to: RKMVSLKEIRQP*MVWCSKGQKGH
Trigger: ATGCCCCTTCTGCCCTTTGGAGCACCAGACCATCCATGGCTGTCTGATTTCCTTTAAAGATACCATCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480553.1
CDS CCA 72 bp GGCACTCCATTCACCCAGGGCAGAGCCAGAAACACGTaGGTAAAGAAGACCTTTCTGGCCTTTTCAATAAAA +
Preference number: 6 (lower is better)
Translates to: GTPFTQGRARNT*VKKTFLAFSIK
Trigger: TTTTATTGAAAAGGCCAGAAAGGTCTTCTTTACCCACGTGTTTCTGGCTCTGCCCTGGGTGAATGGAGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472364.1
CDS CAA 90 bp TTCATGACGCTTGTTAACACGCCATGCCACAGACCAGCATCCCTTTaGAAATCCAGCACGTTTGTTAATGTTTCAGCTTCTGAGTACCCG +
Preference number: 6 (lower is better)
Translates to: FMTLVNTPCHRPASL*KSSTFVNVSASEYP
Trigger: CGGGTACTCAGAAGCTGAAACATTAACAAACGTGCTGGATTTCAAAAGGGATGCTGGTCTGTGGCATGGCGTGTTAACAAGCGTCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS TCA 72 bp CATCCTTTCTGTCCACTCCTCCTGATTTCTAGGGGCTaGAGCAAACAAGATTTCAGAGGACCTACCTTCACT +
Preference number: 6 (lower is better)
Translates to: HPFCPLLLISRG*SKQDFRGPTFT
Trigger: AGTGAAGGTAGGTCCTCTGAAATCTTGTTTGCTTCAGCCCCTAGAAATCAGGAGGAGTGGACAGAAAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS CAA 72 bp GATCATGACGTTGGAAATGATCACTCTGAGGGTCTGTaGACAACAGTCAGGATGTCAACCTTTCCACAGCAC +
Preference number: 6 (lower is better)
Translates to: DHDVGNDHSEGL*TTVRMSTFPQH
Trigger: GTGCTGTGGAAAGGTTGACATCCTGACTGTTGTCAACAGACCCTCAGAGTGATCATTTCCAACGTCATGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478105.5
CDS CAA 72 bp CAGACCAGTGTAACATCAAAACTCCCTGTTTCTCGATaGGTGGCTTCTACTGACAGAAGGCAGTGGAAGAGA +
Preference number: 6 (lower is better)
Translates to: QTSVTSKLPVSR*VASTDRRQWKR
Trigger: TCTCTTCCACTGCCTTCTGTCAGTAGAAGCCACCAATCGAGAAACAGGGAGTTTTGATGTTACACTGGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472364.1
CDS TCA 72 bp AGGCATCACCTGACCAACGTCCTGAACAGTAAGGACTaGCAACTTTTCTTCAGTATCCACTCTGATAACACC +
Preference number: 6 (lower is better)
Translates to: RHHLTNVLNSKD*QLFFSIHSDNT
Trigger: GGTGTTATCAGAGTGGATACTGAAGAAAAGTTGTCAGTCCTTACTGTTCAGGACGTTGGTCAGGTGATGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000473752.5
ENST00000480553.1
ENST00000494435.5
ENST00000651436.1
CDS TCA 72 bp ATCATGACGTTGGAAATGATCACTCTGAGGGTCTGTTaGCAACAGTCAGGATGTCAACCTTTCCACAGCACA +
Preference number: 6 (lower is better)
Translates to: IMTLEMITLRVC*QQSGCQPFHST
Trigger: TGTGCTGTGGAAAGGTTGACATCCTGACTGTTGTCAACAGACCCTCAGAGTGATCATTTCCAACGTCATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478105.5
CDS TCA 72 bp TTGTTAACACGCCATGCCACAGACCAGCATCCCTTTTaGAATCCAGCACGTTTGTTAATGTTTCAGCTTCTG +
Preference number: 6 (lower is better)
Translates to: LLTRHATDQHPF*NPARLLMFQLL
Trigger: CAGAAGCTGAAACATTAACAAACGTGCTGGATTTCAAAAGGGATGCTGGTCTGTGGCATGGCGTGTTAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000473752.5
ENST00000494435.5
ENST00000651436.1
CDS TCA 72 bp GCAATCCATAGTACGCTGTGCCAGTTGCACTGGAACTaGCGCATATTTCTCCCACTTCATCAGTTTTACAAA +
Preference number: 6 (lower is better)
Translates to: AIHSTLCQLHWN*RIFLPLHQFYK
Trigger: TTTGTAAAACTGATGAAGTGGGAGAAATATGCGTCAGTTCCAGTGCAACTGGCACAGCGTACTATGGATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400274.5
ENST00000417564.3
ENST00000435722.7
ENST00000457905.7
ENST00000466639.5
ENST00000480553.1
ENST00000494435.5
ENST00000651436.1
CDS TCA 72 bp AAATCTGCATCTGACATCCTTTCTGTCCACTCCTCCTaGTTTCTAGGGGCTGAAGCAAACAAGATTTCAGAG +
Preference number: 6 (lower is better)
Translates to: KSASDILSVHSS*FLGAEANKISE
Trigger: CTCTGAAATCTTGTTTGCTTCAGCCCCTAGAAATCAGGAGGAGTGGACAGAAAGGATGTCAGATGCAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481883.1
CDS TCA 72 bp TTCACTTCTAGAGACGGATCGCCACTTTCTAGTGTTTaGAGGAATCAAGCAGATTCTTCCCAAGTACTGATA +
Preference number: 6 (lower is better)
Translates to: FTSRDGSPLSSV*RNQADSSQVLI
Trigger: TATCAGTACTTGGGAAGAATCTGCTTGATTCCTTCAAACACTAGAAAGTGGCGATCCGTCTCTAGAAGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481883.1