RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DIO1 (Homo sapiens)

Ensembl gene IDs: ENSG00000211452

Ensembl transcript IDs: ENST00000322679.10, ENST00000361921.8, ENST00000388876.3, ENST00000524406.5, ENST00000525044.5, ENST00000525202.5, ENST00000526329.1, ENST00000527060.5, ENST00000528946.5, ENST00000529329.1, ENST00000529589.5, ENST00000530084.5, ENST00000532493.5, ENST00000534069.5, ENST00000610607.4, ENST00000613679.4, ENST00000617230.2

Found 480 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCTGGCTGCTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTaGGGGCTCCTGGCCAGCAGTAGATGGGCTGCCTGCAGGCGATCC +
Preference number: 1 (lower is better)
Translates to: SWLLWFCMVSTTTGH*GLLASSRWAACRRS
Trigger: GGATCGCCTGCAGGCAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCAGCCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
3UTR CCA 90 bp TCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTaGCCAGCAGTAGATGGGCTGCCTGCAGGCGATCCTGAAGGTTCT +
Preference number: 1 (lower is better)
Translates to: SGSAWCPPPQGTGGS*PAVDGLPAGDPEGS
Trigger: AGAACCTTCAGGATCGCCTGCAGGCAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
3UTR GCA 90 bp CCTGGATTATGTAGAGCCTCTCAGGCAGTGCTGCGTAGAGCTGGCTaGTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGC +
Preference number: 1 (lower is better)
Translates to: PGLCRASQAVLRRAG*SGSAWCPPPQGTGG
Trigger: GCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCAGCCAGCTCTACGCAGCACTGCCTGAGAGGCTCTACATAATCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
3UTR GCA 90 bp GAGGATCCTGCCCTCCTGGATTATGTAGAGCCTCTCAGGCAGTGCTaGGTAGAGCTGGCTGCTCTGGTTCTGCATGGTGTCCACCACCAC +
Preference number: 1 (lower is better)
Translates to: EDPALLDYVEPLRQC*VELAALVLHGVHHH
Trigger: GTGGTGGTGGACACCATGCAGAACCAGAGCAGCCAGCTCTACGCAGCACTGCCTGAGAGGCTCTACATAATCCAGGAGGGCAGGATCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
3UTR GCA 90 bp GTAGAGGATCCTGCCCTCCTGGATTATGTAGAGCCTCTCAGGCAGTaGTGCGTAGAGCTGGCTGCTCTGGTTCTGCATGGTGTCCACCAC +
Preference number: 1 (lower is better)
Translates to: VEDPALLDYVEPLRQ*CVELAALVLHGVHH
Trigger: GTGGTGGACACCATGCAGAACCAGAGCAGCCAGCTCTACGCAGCACTGCCTGAGAGGCTCTACATAATCCAGGAGGGCAGGATCCTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
3UTR CCA 90 bp CCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTaGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCT +
Preference number: 1 (lower is better)
Translates to: PAGSQGELSLEKPSR*SPRIEVSVQINCGA
Trigger: AGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
3UTR GCA 90 bp TGGAGAGAGATACCGTACCTCAGAAGTGTGCCTGTAGAGTGCAACTaGTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGG +
Preference number: 1 (lower is better)
Translates to: WREIPYLRSVPVECN*SLKDRVQGMWSPKW
Trigger: CCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGTTGCACTCTACAGGCACACTTCTGAGGTACGGTATCTCTCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR CCA 90 bp AACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTaGGAGCAGTGTCAGGCTCTACTTTCTTCAACAGGGAACTGTTTC +
Preference number: 1 (lower is better)
Translates to: NCSLKDRVQGMWSPK*EQCQALLSSTGNCF
Trigger: GAAACAGTTCCCTGTTGAAGAAAGTAGAGCCTGACACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR CCA 90 bp TCCAGATTAACTGTGGAGCTTTTCCAGAACAGCACGAACTTCCTCTaGGTTGTAGTTCCAAGGGCCAGATTTACCCTGATGCATGTGCTT +
Preference number: 1 (lower is better)
Translates to: SRLTVELFQNSTNFL*VVVPRARFTLMHVL
Trigger: AAGCACATGCATCAGGGTAAATCTGGCCCTTGGAACTACAACCCAGAGGAAGTTCGTGCTGTTCTGGAAAAGCTCCACAGTTAATCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525044.5
ENST00000528946.5
3UTR CCA 90 bp TCCAGATTAACTGTGGAGCTTTTCCAGAACAGCACGAACTTCCTCTaGGTTGTAGTTCCAAGGGCCAGATTTACCCTTGTAGAGGATCCT +
Preference number: 1 (lower is better)
Translates to: SRLTVELFQNSTNFL*VVVPRARFTLVEDP
Trigger: AGGATCCTCTACAAGGGTAAATCTGGCCCTTGGAACTACAACCCAGAGGAAGTTCGTGCTGTTCTGGAAAAGCTCCACAGTTAATCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
3UTR TCA 90 bp AAGAAATCAGAGAAACAGAATTTCACAAATGAGCTTCTGCATAACTaGATGACAGCATTGCTGGTGCCTATTGTTTGGTTTGGTCAAGGT +
Preference number: 1 (lower is better)
Translates to: KKSEKQNFTNELLHN*MTALLVPIVWFGQG
Trigger: ACCTTGACCAAACCAAACAATAGGCACCAGCAATGCTGTCATTCAGTTATGCAGAAGCTCATTTGTGAAATTCTGTTTCTCTGATTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR TCA 90 bp GCTGCTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCGTTGCACCTCTGTCCTaGGAGGCGGACCACCGGGCA +
Preference number: 2 (lower is better)
Translates to: AALVLHGVHHHRALGAPGVAPLS*EADHRA
Trigger: TGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCAAC...GCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527060.5
ENST00000529329.1
3UTR-3UTR TCA 90 bp GCTGCTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCGGGAGAGCTAAGCCTTaGGAAGCCCTCCCGTTGGTC +
Preference number: 2 (lower is better)
Translates to: AALVLHGVHHHRALGAPGGRAKP*EALPLV
Trigger: GACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCC...GCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
3UTR-3UTR TCA 90 bp TCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCCAGCAGGGAGAGCTAAGCCTTaGGAAGCCCTCCCGTTGGTC +
Preference number: 2 (lower is better)
Translates to: SGSAWCPPPQGTGGSWPAGRAKP*EALPLV
Trigger: GACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCC...TGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
3UTR-3UTR TCA 90 bp CCTGCCCTCCTGGATTATGTAGAGCCTCTCAGGCAGTGCTGCGTAGAGCTGGCTGTTGCACCTCTGTCCTaGGAGGCGGACCACCGGGCA +
Preference number: 2 (lower is better)
Translates to: PALLDYVEPLRQCCVELAVAPLS*EADHRA
Trigger: TGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCAAC...AGCCAGCTCTACGCAGCACTGCCTGAGAGGCTCTACATAATCCAGGAGGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527060.5
ENST00000529329.1
3UTR-3UTR TCA 90 bp CCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTGGGAGAGCTAAGCCTTaGGAAGCCCTCCCGTTGGTC +
Preference number: 2 (lower is better)
Translates to: PAGSQGELSLEKPSRWSPGRAKP*EALPLV
Trigger: GACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCC...AGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR TCA 90 bp CCTGCCCTCCTGGATTATGTAGAGCCTCTCAGGCAGTGCTGCGTAGAGCTGGCTGGGAGAGCTAAGCCTTaGGAAGCCCTCCCGTTGGTC +
Preference number: 2 (lower is better)
Translates to: PALLDYVEPLRQCCVELAGRAKP*EALPLV
Trigger: GACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCC...AGCCAGCTCTACGCAGCACTGCCTGAGAGGCTCTACATAATCCAGGAGGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
3UTR-3UTR CCA 90 bp GCTGGCTGCTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCGAGAAGCCCTCCCGTTaGTCACCTAGAATTGAGGTA +
Preference number: 2 (lower is better)
Translates to: AGCSGSAWCPPPQGTGGSEKPSR*SPRIEV
Trigger: TACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTC...GGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCAGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
3UTR-3UTR CCA 90 bp CCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGGGTAAAAGCCAGCTaGGTCTCAGGGAGAGCTAAG +
Preference number: 2 (lower is better)
Translates to: PAGSQGELSLEKPSRWSPRVKAS*VSGRAK
Trigger: CTTAGCTCTCCCTGAGACCCAGCTGGCTTTTACCCT...AGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR GCA 90 bp GCTGCTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCAAAGCCCAGCCATCTTaGATAAACTCCCAAATGTTG +
Preference number: 2 (lower is better)
Translates to: AALVLHGVHHHRALGAPGKAQPS*INSQML
Trigger: CAACATTTGGGAGTTTATGCAAGATGGCTGGGCTTT...GCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529329.1
3UTR-3UTR CCA 90 bp CCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTGAGAAGCCCTCCCGTTaGTCACCTAGAATTGAGGTA +
Preference number: 2 (lower is better)
Translates to: PAGSQGELSLEKPSRWSPEKPSR*SPRIEV
Trigger: TACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTC...AGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR GCA 90 bp CTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTGTCAGGTTGGGTGCTGTGGCCTaGATTCCTCAGCTGGGAGTT +
Preference number: 2 (lower is better)
Translates to: LSKTVCRECGLQSGSSVRLGAVA*IPQLGV
Trigger: AACTCCCAGCTGAGGAATGCAGGCCACAGCACCCAA...CCTGACACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR GCA 90 bp CTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCCAGCAGTGGCCTATTACCTTaGATAAACTCCCAAATGTTG +
Preference number: 2 (lower is better)
Translates to: LWFCMVSTTTGHWGLLASSGLLP*INSQML
Trigger: CAACATTTGGGAGTTTATGCAAGGTAATAGGCCACT...GCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527060.5
3UTR-3UTR CCA 90 bp AAGCCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCAGAGAAGCCCTCCCGTTaGTCACCTAGAATTGAGGTA +
Preference number: 2 (lower is better)
Translates to: KPAGSQGELSLEKPSRWSEKPSR*SPRIEV
Trigger: TACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTC...TGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR GCA 90 bp AGTTCCAAGGGCCAGATTTACCCTTGTAGAGGATCCTGCCCTCCTGGATTATGTCCTCTCAGGCAGTGCTaGGTAGAGCTGGCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: SSKGQIYPCRGSCPPGLCPLRQC*VELAAL
Trigger: CAGAGCAGCCAGCTCTACGCAGCACTGCCTGAGAGG...ACATAATCCAGGAGGGCAGGATCCTCTACAAGGGTAAATCTGGCCCTTGGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
3UTR-3UTR CCA 90 bp AGAGGATCCTGCCCTCCTGGATTATGTAGAGCCTCTCAGGCAGTGCTGCGTAGAAGCACGAACTTCCTCTaGGTTGTAGTTCCAAGGGCC +
Preference number: 2 (lower is better)
Translates to: RGSCPPGLCRASQAVLRRSTNFL*VVVPRA
Trigger: GGCCCTTGGAACTACAACCCAGAGGAAGTTCGTGCT...TCTACGCAGCACTGCCTGAGAGGCTCTACATAATCCAGGAGGGCAGGATCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
3UTR-3UTR CCA 90 bp GCCAGATTTACCCTTGTAGAGGATCCTGCCCTCCTGGATTATGTAGAGCCTCTCTGCTCTGGTTCTGCATaGTGTCCACCACCACAGGGC +
Preference number: 2 (lower is better)
Translates to: ARFTLVEDPALLDYVEPLCSGSA*CPPPQG
Trigger: GCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCA...GAGAGGCTCTACATAATCCAGGAGGGCAGGATCCTCTACAAGGGTAAATCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
3UTR-3UTR TCA 90 bp GAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGGAGAGCTAAGCCTTaGGAAGCCCTCCCGTTGGTC +
Preference number: 2 (lower is better)
Translates to: EKPSRWSPRIEVSVQINCGRAKP*EALPLV
Trigger: GACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCC...ACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
3UTR-3UTR GCA 90 bp CCAAGGGCCAGATTTACCCTTGTAGAGGATCCTGCCCTCCTGGATTATGTAGAGCTGCGTAGAGCTGGCTaGTCTGGTTCTGCATGGTGT +
Preference number: 2 (lower is better)
Translates to: PRARFTLVEDPALLDYVELRRAG*SGSAWC
Trigger: ACACCATGCAGAACCAGAGCAGCCAGCTCTACGCAG...CTCTACATAATCCAGGAGGGCAGGATCCTCTACAAGGGTAAATCTGGCCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
3UTR-3UTR CCA 90 bp CGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCCAACCACCACAGGGCACTaGGGGCTCCTGGCCAGCAGT +
Preference number: 2 (lower is better)
Translates to: RWSPRIEVSVQINCGAFPTTTGH*GLLASS
Trigger: ACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGT...TGGAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
3UTR-3UTR CCA 90 bp CCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTGCTCTGGTTCTGCATaGTGTCCACCACCACAGGGC +
Preference number: 2 (lower is better)
Translates to: PSRWSPRIEVSVQINCGACSGSA*CPPPQG
Trigger: GCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCA...AGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
3UTR-3UTR TCA 90 bp ACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTAACAGGGAACTGGCCTaGACAGCTCAAGTGTTGCTT +
Preference number: 2 (lower is better)
Translates to: TALSKTVCRECGLQSGSSNRELA*TAQVLL
Trigger: AAGCAACACTTGAGCTGTTCAGGCCAGTTCCCTGTT...ACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR GCA 90 bp GCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTGTCTTTGTCTTGATTGGGTaGTGTGGCCTGCATTCCTCA +
Preference number: 2 (lower is better)
Translates to: ALSKTVCRECGLQSGSSVFVLIG*CGLHSS
Trigger: TGAGGAATGCAGGCCACAGCACCCAATCAAGACAAA...GACACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR CCA 90 bp CCAAGGGCCAGATTTACCCTTGTAGAGGATCCTGCCCTCCTGGATTATGTAGAGAGCACGAACTTCCTCTaGGTTGTAGTTCCAAGGGCC +
Preference number: 2 (lower is better)
Translates to: PRARFTLVEDPALLDYVESTNFL*VVVPRA
Trigger: GGCCCTTGGAACTACAACCCAGAGGAAGTTCGTGCT...CTCTACATAATCCAGGAGGGCAGGATCCTCTACAAGGGTAAATCTGGCCCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
3UTR-3UTR GCA 90 bp AAGCCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACAGCTGGGAGTTGTTTaGTTAGATCAGAAAAATCTG +
Preference number: 2 (lower is better)
Translates to: KPAGSQGELSLEKPSRWSQLGVV*LDQKNL
Trigger: CAGATTTTTCTGATCTAAGCAAACAACTCCCAGCTG...TGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR GCA 90 bp GTGCCTGTAGAGTGCAACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTTTTGTCTTGATTGGGTaGTGTGGCCTGCATTCCTCA +
Preference number: 2 (lower is better)
Translates to: VPVECNCSLKDRVQGMWSFVLIG*CGLHSS
Trigger: TGAGGAATGCAGGCCACAGCACCCAATCAAGACAAA...AGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGTTGCACTCTACAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR GCA 90 bp CTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGGCTGCTCTGGTTCTaGATGGTGTCCACCACCACA +
Preference number: 2 (lower is better)
Translates to: LEKPSRWSPRIEVSVQINWLLWF*MVSTTT
Trigger: TGTGGTGGTGGACACCATGCAGAACCAGAGCAGCCA...GTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
3UTR-3UTR CCA 90 bp AGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAGCACGAACTTCCTCTaGGTTGTAGTTCCAAGGGCC +
Preference number: 2 (lower is better)
Translates to: SLEKPSRWSPRIEVSVQISTNFL*VVVPRA
Trigger: GGCCCTTGGAACTACAACCCAGAGGAAGTTCGTGCT...AATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
3UTR-3UTR CCA 90 bp AGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGAGCACGAACTTCCTCTaGGTTGTAGTTCCAAGGGCC +
Preference number: 2 (lower is better)
Translates to: SPPVGHLELRYLSRLTVESTNFL*VVVPRA
Trigger: GGCCCTTGGAACTACAACCCAGAGGAAGTTCGTGCT...CTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
3UTR-3UTR CCA 90 bp CCAAGGGCCAGATTTACCCTTGTAGAGGATCCTGCCCTCCTGGATTATGTAGAGGAGAAGCCCTCCCGTTaGTCACCTAGAATTGAGGTA +
Preference number: 2 (lower is better)
Translates to: PRARFTLVEDPALLDYVEEKPSR*SPRIEV
Trigger: TACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTC...CTCTACATAATCCAGGAGGGCAGGATCCTCTACAAGGGTAAATCTGGCCCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
3UTR-3UTR CCA 90 bp AGTTCCAAGGGCCAGATTTACCCTTGTAGAGGATCCTGCCCTCCTGGATTATGTAGGGTAAAAGCCAGCTaGGTCTCAGGGAGAGCTAAG +
Preference number: 2 (lower is better)
Translates to: SSKGQIYPCRGSCPPGLCRVKAS*VSGRAK
Trigger: CTTAGCTCTCCCTGAGACCCAGCTGGCTTTTACCCT...ACATAATCCAGGAGGGCAGGATCCTCTACAAGGGTAAATCTGGCCCTTGGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
3UTR-3UTR CCA 90 bp ATTTACCCTTGTAGAGGATCCTGCCCTCCTGGATTATGTAGAGCCTCTCAGGCAAGGGTAAAAGCCAGCTaGGTCTCAGGGAGAGCTAAG +
Preference number: 2 (lower is better)
Translates to: IYPCRGSCPPGLCRASQARVKAS*VSGRAK
Trigger: CTTAGCTCTCCCTGAGACCCAGCTGGCTTTTACCCT...TGCCTGAGAGGCTCTACATAATCCAGGAGGGCAGGATCCTCTACAAGGGTAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
3UTR-3UTR CCA 90 bp GAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTAGGGTAAAAGCCAGCTaGGTCTCAGGGAGAGCTAAG +
Preference number: 2 (lower is better)
Translates to: EKPSRWSPRIEVSVQINCRVKAS*VSGRAK
Trigger: CTTAGCTCTCCCTGAGACCCAGCTGGCTTTTACCCT...ACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
3UTR-3UTR CCA 90 bp GGGATGTGTTACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAGGGTAAAAGCCAGCTaGGTCTCAGGGAGAGCTAAG +
Preference number: 2 (lower is better)
Translates to: GMCYHGNSPIITTNVDRFRVKAS*VSGRAK
Trigger: CTTAGCTCTCCCTGAGACCCAGCTGGCTTTTACCCT...AAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGTAACACATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR CCA 90 bp CGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCCATGCTCTGGTTCTGCATaGTGTCCACCACCACAGGGC +
Preference number: 2 (lower is better)
Translates to: RWSPRIEVSVQINCGAFPCSGSA*CPPPQG
Trigger: GCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCA...TGGAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
3UTR-3UTR TCA 90 bp GGGATGTGTTACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAACAGGGAACTGGCCTaGACAGCTCAAGTGTTGCTT +
Preference number: 2 (lower is better)
Translates to: GMCYHGNSPIITTNVDRFNRELA*TAQVLL
Trigger: AAGCAACACTTGAGCTGTTCAGGCCAGTTCCCTGTT...AAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGTAACACATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR GCA 90 bp CGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCCATTGGGTGCTGTGGCCTaGATTCCTCAGCTGGGAGTT +
Preference number: 2 (lower is better)
Translates to: RWSPRIEVSVQINCGAFPLGAVA*IPQLGV
Trigger: AACTCCCAGCTGAGGAATGCAGGCCACAGCACCCAA...TGGAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
3UTR-3UTR GCA 90 bp GAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTCTCTCAAAGACCGTGTaGAGGGAATGTGGTCTCCAA +
Preference number: 2 (lower is better)
Translates to: EKPSRWSPRIEVSVQINCLSKTV*RECGLQ
Trigger: TTGGAGACCACATTCCCTGCACACGGTCTTTGAGAG...ACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
3UTR-3UTR GCA 90 bp GGGATGTGTTACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTCCTGTAGAGTGCAACTaGTCTCTCAAAGACCGTGTG +
Preference number: 2 (lower is better)
Translates to: GMCYHGNSPIITTNVDRFPVECN*SLKDRV
Trigger: CACACGGTCTTTGAGAGAGCAGTTGCACTCTACAGG...AAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGTAACACATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR CCA 90 bp CCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTATGTGGTCTCCAAAGTaGGAGCAGTGTCAGGCTCTA +
Preference number: 2 (lower is better)
Translates to: PPVGHLELRYLSRLTVELMWSPK*EQCQAL
Trigger: TAGAGCCTGACACTGCTCCCACTTTGGAGACCACAT...AAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
3UTR CAA 90 bp GTCTTGATTGGGTGCTGTGGCCTGCATTCCTCAGCTGGGAGTTGTTaGCTTAGATCAGAAAAATCTGAGCTAGTGATTCAGCTAGGGACA +
Preference number: 2 (lower is better)
Translates to: VLIGCCGLHSSAGSC*LRSEKSELVIQLGT
Trigger: TGTCCCTAGCTGAATCACTAGCTCAGATTTTTCTGATCTAAGCAAACAACTCCCAGCTGAGGAATGCAGGCCACAGCACCCAATCAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR TCA 90 bp TTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTAACAGGGAACTGGCCTaGACAGCTCAAGTGTTGCTT +
Preference number: 2 (lower is better)
Translates to: LRSPPVGHLELRYLSRLTNRELA*TAQVLL
Trigger: AAGCAACACTTGAGCTGTTCAGGCCAGTTCCCTGTT...AGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
3UTR-3UTR CCA 90 bp CGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCCAAGCACGAACTTCCTCTaGGTTGTAGTTCCAAGGGCC +
Preference number: 2 (lower is better)
Translates to: RWSPRIEVSVQINCGAFPSTNFL*VVVPRA
Trigger: GGCCCTTGGAACTACAACCCAGAGGAAGTTCGTGCT...TGGAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
3UTR-3UTR CCA 90 bp ACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAAATCTTTTGCTTGATTGGGTGCTGTaGCCTGCATTCCTCAGCTGG +
Preference number: 2 (lower is better)
Translates to: TMETHPSSPPMWTGLNLLLDWVL*PAFLSW
Trigger: CCAGCTGAGGAATGCAGGCCACAGCACCCAATCAAG...CAAAAGATTTAAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR CCA 90 bp GCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACAATTTGTCTTGATTaGGTGCTGTGGCCTGCATTC +
Preference number: 2 (lower is better)
Translates to: ALRSPPVGHLELRYLSRLTICLD*VLWPAF
Trigger: GAATGCAGGCCACAGCACCCAATCAAGACAAATTGT...TAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
3UTR-3UTR CCA 90 bp CTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTCTTCAACAGGGAACTaGCCTGAACAGCTCAAGTGT +
Preference number: 2 (lower is better)
Translates to: LEKPSRWSPRIEVSVQINSSTGN*PEQLKC
Trigger: ACACTTGAGCTGTTCAGGCCAGTTCCCTGTTGAAGA...GTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
3UTR-3UTR TCA 90 bp CCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCGGGCCAGATTTACCCTaGTGCATGTGCTTCTTCAAT +
Preference number: 2 (lower is better)
Translates to: PVGHLELRYLSRLTVELFGPDLP*CMCFFN
Trigger: ATTGAAGAAGCACATGCATCAGGGTAAATCTGGCCC...GAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525044.5
ENST00000528946.5
3UTR-3UTR CCA 90 bp GAACTGTTTCTTCAACAGGGAACTGGCCTGAACAGCTCAAGTGTTGCTTCATTTGAGAAGCCCTCCCGTTaGTCACCTAGAATTGAGGTA +
Preference number: 2 (lower is better)
Translates to: ELFLQQGTGLNSSSVASFEKPSR*SPRIEV
Trigger: TACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTC...AAATGAAGCAACACTTGAGCTGTTCAGGCCAGTTCCCTGTTGAAGAAACAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR TCA 90 bp GTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCCAGGGGCCAGATTTACCCTaGTGCATGTGCTTCTTCAAT +
Preference number: 2 (lower is better)
Translates to: VGHLELRYLSRLTVELFQGPDLP*CMCFFN
Trigger: ATTGAAGAAGCACATGCATCAGGGTAAATCTGGCCC...CTGGAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525044.5
ENST00000528946.5
3UTR-3UTR GCA 90 bp ACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAAATCTTTTGCCTGTAGAGTGCAACTaGTCTCTCAAAGACCGTGTG +
Preference number: 2 (lower is better)
Translates to: TMETHPSSPPMWTGLNLLPVECN*SLKDRV
Trigger: CACACGGTCTTTGAGAGAGCAGTTGCACTCTACAGG...CAAAAGATTTAAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR CCA 90 bp ACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAAATCTTTTGGAGAAGCCCTCCCGTTaGTCACCTAGAATTGAGGTA +
Preference number: 2 (lower is better)
Translates to: TMETHPSSPPMWTGLNLLEKPSR*SPRIEV
Trigger: TACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTC...CAAAAGATTTAAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR GCA 90 bp TACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAAATCTTTTCTCTCAAAGACCGTGTaGAGGGAATGTGGTCTCCAA +
Preference number: 2 (lower is better)
Translates to: YHGNSPIITTNVDRFKSFLSKTV*RECGLQ
Trigger: TTGGAGACCACATTCCCTGCACACGGTCTTTGAGAG...AAAAGATTTAAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR GCA 90 bp ACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAAATCTTTTGAGTGTGCCTGTAGAGTaGAACTGCTCTCTCAAAGAC +
Preference number: 2 (lower is better)
Translates to: TMETHPSSPPMWTGLNLLSVPVE*NCSLKD
Trigger: GTCTTTGAGAGAGCAGTTGCACTCTACAGGCACACT...CAAAAGATTTAAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR CCA 90 bp CGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCCAACAATTTGTCTTGATTaGGTGCTGTGGCCTGCATTC +
Preference number: 2 (lower is better)
Translates to: RWSPRIEVSVQINCGAFPTICLD*VLWPAF
Trigger: GAATGCAGGCCACAGCACCCAATCAAGACAAATTGT...TGGAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
3UTR-3UTR CCA 90 bp ACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAAATCTTTTGTCTTCAACAGGGAACTaGCCTGAACAGCTCAAGTGT +
Preference number: 2 (lower is better)
Translates to: TMETHPSSPPMWTGLNLLSSTGN*PEQLKC
Trigger: ACACTTGAGCTGTTCAGGCCAGTTCCCTGTTGAAGA...CAAAAGATTTAAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR CCA 90 bp ATAACATTTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCAATGTGGTCTCCAAAGTaGGAGCAGTGTCAGGCTCTA +
Preference number: 2 (lower is better)
Translates to: ITFSFESSHSRVYFRLWPMWSPK*EQCQAL
Trigger: TAGAGCCTGACACTGCTCCCACTTTGGAGACCACAT...TGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAAATGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR CAA 90 bp GGTAAAATGAATTTCCCTAATAGAAGGAATGCCAGCTTGAATTACTaGGTATCAGAGTGGCTGGAGAGAGATACCGTACCTCAGAAGTGT +
Preference number: 2 (lower is better)
Translates to: GKMNFPNRRNASLNY*VSEWLERDTVPQKC
Trigger: ACACTTCTGAGGTACGGTATCTCTCTCCAGCCACTCTGATACCAAGTAATTCAAGCTGGCATTCCTTCTATTAGGGAAATTCATTTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR TCA 90 bp ATAACATTTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCATCAAAGATGGTAAAGTaGGTACTCTCCTCTTCCCTG +
Preference number: 2 (lower is better)
Translates to: ITFSFESSHSRVYFRLWPSKMVK*VLSSSL
Trigger: CAGGGAAGAGGAGAGTACTCACTTTACCATCTTTGA...TGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAAATGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR TCA 90 bp TTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCATCATAAATCAAAGATGGTAAAGTaGGTACTCTCCTCTTCCCTG +
Preference number: 2 (lower is better)
Translates to: FLLNQVTAVCTLGCGHHKSKMVK*VLSSSL
Trigger: CAGGGAAGAGGAGAGTACTCACTTTACCATCTTTGA...TTTATGATGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR CCA 90 bp TTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCATCATAAAACAATTTGTCTTGATTaGGTGCTGTGGCCTGCATTC +
Preference number: 2 (lower is better)
Translates to: FLLNQVTAVCTLGCGHHKTICLD*VLWPAF
Trigger: GAATGCAGGCCACAGCACCCAATCAAGACAAATTGT...TTTATGATGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR CCA 90 bp ATAACATTTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCAAGGGATGTGTTACCATaGAAACTCACCCATCATCAC +
Preference number: 2 (lower is better)
Translates to: ITFSFESSHSRVYFRLWPRDVLP*KLTHHH
Trigger: GTGATGATGGGTGAGTTTCCATGGTAACACATCCCT...TGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAAATGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR GCA 90 bp TTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCATCATAAACAGCTGGGAGTTGTTTaGTTAGATCAGAAAAATCTG +
Preference number: 2 (lower is better)
Translates to: FLLNQVTAVCTLGCGHHKQLGVV*LDQKNL
Trigger: CAGATTTTTCTGATCTAAGCAAACAACTCCCAGCTG...TTTATGATGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR CCA 90 bp ACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAAATCTTTTGTCTCTTCCTAACAACTaGAATTCTTCCCATAATTGG +
Preference number: 2 (lower is better)
Translates to: TMETHPSSPPMWTGLNLLSLPNN*NSSHNW
Trigger: CCAATTATGGGAAGAATTCCAGTTGTTAGGAAGAGA...CAAAAGATTTAAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR TCA 90 bp ATAACATTTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCAGGCTATCCATCAGTTTaGTGTAATCTAACACAAATG +
Preference number: 2 (lower is better)
Translates to: ITFSFESSHSRVYFRLWPGYPSV*CNLTQM
Trigger: CATTTGTGTTAGATTACATCAAACTGATGGATAGCC...TGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAAATGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR CCA 90 bp TTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCATCATAAATCTCTTCCTAACAACTaGAATTCTTCCCATAATTGG +
Preference number: 2 (lower is better)
Translates to: FLLNQVTAVCTLGCGHHKSLPNN*NSSHNW
Trigger: CCAATTATGGGAAGAATTCCAGTTGTTAGGAAGAGA...TTTATGATGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR CCA 90 bp CTAACACAAATGACCATTAAGAGACTTGCGAAGAAATCAGAGAAACAGAATTTCAGGGATGTGTTACCATaGAAACTCACCCATCATCAC +
Preference number: 2 (lower is better)
Translates to: LTQMTIKRLAKKSEKQNFRDVLP*KLTHHH
Trigger: GTGATGATGGGTGAGTTTCCATGGTAACACATCCCT...GAAATTCTGTTTCTCTGATTTCTTCGCAAGTCTCTTAATGGTCATTTGTGTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR TCA 90 bp CTAACACAAATGACCATTAAGAGACTTGCGAAGAAATCAGAGAAACAGAATTTCGAAGGAATGCCAGCTTaGATTACTTGGTATCAGAGT +
Preference number: 2 (lower is better)
Translates to: LTQMTIKRLAKKSEKQNFEGMPA*ITWYQS
Trigger: ACTCTGATACCAAGTAATTCAAGCTGGCATTCCTTC...GAAATTCTGTTTCTCTGATTTCTTCGCAAGTCTCTTAATGGTCATTTGTGTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR CCA 90 bp TTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCATCATAAAATAGATGAATACCAATaGCTATCCATCAGTTTGATG +
Preference number: 2 (lower is better)
Translates to: FLLNQVTAVCTLGCGHHKIDEYQ*LSISLM
Trigger: CATCAAACTGATGGATAGCCATTGGTATTCATCTAT...TTTATGATGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR GCA 90 bp CTAACACAAATGACCATTAAGAGACTTGCGAAGAAATCAGAGAAACAGAATTTCCAGCTGGGAGTTGTTTaGTTAGATCAGAAAAATCTG +
Preference number: 2 (lower is better)
Translates to: LTQMTIKRLAKKSEKQNFQLGVV*LDQKNL
Trigger: CAGATTTTTCTGATCTAAGCAAACAACTCCCAGCTG...GAAATTCTGTTTCTCTGATTTCTTCGCAAGTCTCTTAATGGTCATTTGTGTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR CCA 72 bp GCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTaGCCAGCAGTAGATGGGCTGCCTGCAGGCGATCCT +
Preference number: 3 (lower is better)
Translates to: AWCPPPQGTGGS*PAVDGLPAGDP
Trigger: AGGATCGCCTGCAGGCAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
3UTR CCA 72 bp CTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTaGGGGCTCCTGGCCAGCAGTAGATGGGCTGCCTGC +
Preference number: 3 (lower is better)
Translates to: LWFCMVSTTTGH*GLLASSRWAAC
Trigger: GCAGGCAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
3UTR GCA 72 bp TGTAGAGCCTCTCAGGCAGTGCTGCGTAGAGCTGGCTaGTCTGGTTCTGCATGGTGTCCACCACCACAGGGC +
Preference number: 3 (lower is better)
Translates to: CRASQAVLRRAG*SGSAWCPPPQG
Trigger: GCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCAGCCAGCTCTACGCAGCACTGCCTGAGAGGCTCTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
3UTR TCA 72 bp ACCTTGCATAAACTCCCAAATGTTGCACCTCTGTCCTaGGAGGCGGACCACCGGGCAGTTTGGGGCCAGACC +
Preference number: 3 (lower is better)
Translates to: TLHKLPNVAPLS*EADHRAVWGQT
Trigger: GGTCTGGCCCCAAACTGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCAACATTTGGGAGTTTATGCAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527060.5
3UTR GCA 72 bp GCCCTCCTGGATTATGTAGAGCCTCTCAGGCAGTGCTaGGTAGAGCTGGCTGCTCTGGTTCTGCATGGTGTC +
Preference number: 3 (lower is better)
Translates to: ALLDYVEPLRQC*VELAALVLHGV
Trigger: GACACCATGCAGAACCAGAGCAGCCAGCTCTACGCAGCACTGCCTGAGAGGCTCTACATAATCCAGGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
3UTR GCA 72 bp CCTGCCCTCCTGGATTATGTAGAGCCTCTCAGGCAGTaGTGCGTAGAGCTGGCTGCTCTGGTTCTGCATGGT +
Preference number: 3 (lower is better)
Translates to: PALLDYVEPLRQ*CVELAALVLHG
Trigger: ACCATGCAGAACCAGAGCAGCCAGCTCTACGCAGCACTGCCTGAGAGGCTCTACATAATCCAGGAGGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
3UTR-3UTR CAA 90 bp GGCACTGGGGGCTCCTGGCCAGCAGTAGATGGGCTGCCTGCAGGCGATCCTGAAGTTGGTCACCTAGAATaGAGGTATCTGTCCAGATTA +
Preference number: 3 (lower is better)
Translates to: GTGGSWPAVDGLPAGDPEVGHLE*RYLSRL
Trigger: TAATCTGGACAGATACCTCAATTCTAGGTGACCAAC...TTCAGGATCGCCTGCAGGCAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
3UTR TCA 72 bp ATCTTGCATAAACTCCCAAATGTTGCACCTCTGTCCTaGGAGGCGGACCACCGGGCAGTTTGGGGCCAGACC +
Preference number: 3 (lower is better)
Translates to: ILHKLPNVAPLS*EADHRAVWGQT
Trigger: GGTCTGGCCCCAAACTGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCAACATTTGGGAGTTTATGCAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529329.1
3UTR-3UTR CAA 90 bp TCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCCAGCAGTTGGTCACCTAGAATaGAGGTATCTGTCCAGATTA +
Preference number: 3 (lower is better)
Translates to: SGSAWCPPPQGTGGSWPAVGHLE*RYLSRL
Trigger: TAATCTGGACAGATACCTCAATTCTAGGTGACCAAC...TGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
3UTR-3UTR CAA 90 bp GGCACTGGGGGCTCCTGGCCAGCAGTAGATGGGCTGCCTGCAGGCGATCCTGAATCTTCAATAAGCCTCTaGAACTGGTCAAATTTGAAC +
Preference number: 3 (lower is better)
Translates to: GTGGSWPAVDGLPAGDPESSISL*NWSNLN
Trigger: GTTCAAATTTGACCAGTTCAAGAGGCTTATTGAAGA...TTCAGGATCGCCTGCAGGCAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
3UTR GCA 72 bp AGTTCCAAGGGCCAGATTTACCCTTGTAGAGGATCCTaGCCTCCTGGATTATGTAGAGCCTCTCAGGCAGTG +
Preference number: 3 (lower is better)
Translates to: SSKGQIYPCRGS*PPGLCRASQAV
Trigger: CACTGCCTGAGAGGCTCTACATAATCCAGGAGGGCAGGATCCTCTACAAGGGTAAATCTGGCCCTTGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
3UTR CCA 72 bp CTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTaGGAGCAGTGTCAGGCTCTACTTTCTTCAACAGGG +
Preference number: 3 (lower is better)
Translates to: LKDRVQGMWSPK*EQCQALLSSTG
Trigger: CCCTGTTGAAGAAAGTAGAGCCTGACACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR GCA 72 bp ATACCGTACCTCAGAAGTGTGCCTGTAGAGTGCAACTaGTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCT +
Preference number: 3 (lower is better)
Translates to: IPYLRSVPVECN*SLKDRVQGMWS
Trigger: AGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGTTGCACTCTACAGGCACACTTCTGAGGTACGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR GCA 72 bp AGAGAGATACCGTACCTCAGAAGTGTGCCTGTAGAGTaGAACTGCTCTCTCAAAGACCGTGTGCAGGGAATG +
Preference number: 3 (lower is better)
Translates to: REIPYLRSVPVE*NCSLKDRVQGM
Trigger: CATTCCCTGCACACGGTCTTTGAGAGAGCAGTTGCACTCTACAGGCACACTTCTGAGGTACGGTATCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR CAA 90 bp CCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTGCCAGCTTGAATTACTaGGTATCAGAGTGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: PSRWSPRIEVSVQINCGAASLNY*VSEWLE
Trigger: CTCCAGCCACTCTGATACCAAGTAATTCAAGCTGGC...AGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
3UTR-3UTR CAA 90 bp AGAGGATCCTGCCCTCCTGGATTATGTAGAGCCTCTCAGGCAGTGCTGCGTAGACAGTGGCCTATTACCTaGCATAAACTCCCAAATGTT +
Preference number: 3 (lower is better)
Translates to: RGSCPPGLCRASQAVLRRQWPIT*HKLPNV
Trigger: AACATTTGGGAGTTTATGCAAGGTAATAGGCCACTG...TCTACGCAGCACTGCCTGAGAGGCTCTACATAATCCAGGAGGGCAGGATCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527060.5
3UTR CCA 72 bp TCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTaGTCACCTAGAATTGAGGTATCTGTCCAGATTAAC +
Preference number: 3 (lower is better)
Translates to: SQGELSLEKPSR*SPRIEVSVQIN
Trigger: GTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
3UTR CCA 72 bp ACTGTGGAGCTTTTCCAGAACAGCACGAACTTCCTCTaGGTTGTAGTTCCAAGGGCCAGATTTACCCTGATG +
Preference number: 3 (lower is better)
Translates to: TVELFQNSTNFL*VVVPRARFTLM
Trigger: CATCAGGGTAAATCTGGCCCTTGGAACTACAACCCAGAGGAAGTTCGTGCTGTTCTGGAAAAGCTCCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525044.5
ENST00000528946.5
3UTR-3UTR CAA 90 bp CTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTGTCAGGTCAGCTGGGAGTTGTTaGCTTAGATCAGAAAAATCT +
Preference number: 3 (lower is better)
Translates to: LSKTVCRECGLQSGSSVRSAGSC*LRSEKS
Trigger: AGATTTTTCTGATCTAAGCAAACAACTCCCAGCTGA...CCTGACACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR CCA 72 bp ACTGTGGAGCTTTTCCAGAACAGCACGAACTTCCTCTaGGTTGTAGTTCCAAGGGCCAGATTTACCCTTGTA +
Preference number: 3 (lower is better)
Translates to: TVELFQNSTNFL*VVVPRARFTLV
Trigger: TACAAGGGTAAATCTGGCCCTTGGAACTACAACCCAGAGGAAGTTCGTGCTGTTCTGGAAAAGCTCCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
3UTR-3UTR CAA 90 bp GAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCGTTGGTCACCTAGAATaGAGGTATCTGTCCAGATTA +
Preference number: 3 (lower is better)
Translates to: ELSLEKPSRWSPRIEVSVVGHLE*RYLSRL
Trigger: TAATCTGGACAGATACCTCAATTCTAGGTGACCAAC...GACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
3UTR-3UTR CAA 90 bp TTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGCCAGCTTGAATTACTaGGTATCAGAGTGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: LRSPPVGHLELRYLSRLTASLNY*VSEWLE
Trigger: CTCCAGCCACTCTGATACCAAGTAATTCAAGCTGGC...AGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
3UTR-3UTR CAA 90 bp AGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTGTTGGTCACCTAGAATaGAGGTATCTGTCCAGATTA +
Preference number: 3 (lower is better)
Translates to: SLEKPSRWSPRIEVSVQIVGHLE*RYLSRL
Trigger: TAATCTGGACAGATACCTCAATTCTAGGTGACCAAC...AATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
3UTR-3UTR CAA 90 bp ATTTACCCTTGTAGAGGATCCTGCCCTCCTGGATTATGTAGAGCCTCTCAGGCAAAAAGCCCAGCCATCTaGCATAAACTCCCAAATGTT +
Preference number: 3 (lower is better)
Translates to: IYPCRGSCPPGLCRASQAKSPAI*HKLPNV
Trigger: AACATTTGGGAGTTTATGCAAGATGGCTGGGCTTTT...TGCCTGAGAGGCTCTACATAATCCAGGAGGGCAGGATCCTCTACAAGGGTAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529329.1
3UTR-3UTR CAA 90 bp GAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCTCTTCAATAAGCCTCTaGAACTGGTCAAATTTGAAC +
Preference number: 3 (lower is better)
Translates to: ELSLEKPSRWSPRIEVSVSSISL*NWSNLN
Trigger: GTTCAAATTTGACCAGTTCAAGAGGCTTATTGAAGA...GACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525044.5
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
3UTR-3UTR CAA 90 bp GCCAGATTTACCCTTGTAGAGGATCCTGCCCTCCTGGATTATGTAGAGCCTCTCTCTTCAATAAGCCTCTaGAACTGGTCAAATTTGAAC +
Preference number: 3 (lower is better)
Translates to: ARFTLVEDPALLDYVEPLSSISL*NWSNLN
Trigger: GTTCAAATTTGACCAGTTCAAGAGGCTTATTGAAGA...GAGAGGCTCTACATAATCCAGGAGGGCAGGATCCTCTACAAGGGTAAATCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
3UTR-3UTR CAA 90 bp TTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCATCATAAAGCTGGTGCCTATTGTTaGGTTTGGTCAAGGTTATGC +
Preference number: 3 (lower is better)
Translates to: FLLNQVTAVCTLGCGHHKAGAYC*VWSRLC
Trigger: GCATAACCTTGACCAAACCAAACAATAGGCACCAGC...TTTATGATGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR TCA 72 bp GAGAAACAGAATTTCACAAATGAGCTTCTGCATAACTaGATGACAGCATTGCTGGTGCCTATTGTTTGGTTT +
Preference number: 3 (lower is better)
Translates to: EKQNFTNELLHN*MTALLVPIVWF
Trigger: AAACCAAACAATAGGCACCAGCAATGCTGTCATTCAGTTATGCAGAAGCTCATTTGTGAAATTCTGTTTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
3UTR-3UTR CAA 90 bp ATAAGCCTCTTGAACTGGTCAAATTTGAACATAAATGAAGGTCAGGTACAACTTGTTGGTCACCTAGAATaGAGGTATCTGTCCAGATTA +
Preference number: 3 (lower is better)
Translates to: ISLLNWSNLNINEGQVQLVGHLE*RYLSRL
Trigger: TAATCTGGACAGATACCTCAATTCTAGGTGACCAAC...AAGTTGTACCTGACCTTCATTTATGTTCAAATTTGACCAGTTCAAGAGGCTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525044.5
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
CDS-3UTR TCA 90 bp ACAGGGCACTGGGGGCTCCTGGCCAGCAGTAGATGGGCTGCCTGCAGGCGATCCGTTGCACCTCTGTCCTaGGAGGCGGACCACCGGGCA +
Preference number: 4 (lower is better)
Translates to: TGHWGLLASSRWAACRRSVAPLS*EADHRA
Trigger: TGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCAAC...GGATCGCCTGCAGGCAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCCCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000610607.4
CDS-3UTR CCA 90 bp GTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCCAGCAGTAGATGGGCTGCCGGCACTGGGGGCTCCTaGCCAGCAGTAGATGGGCTG +
Preference number: 4 (lower is better)
Translates to: VSTTTGHWGLLASSRWAAGTGGS*PAVDGL
Trigger: CAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCC...GGCAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR TCA 90 bp CCACCACAGGGCACTGGGGGCTCCTGGCCAGCAGTAGATGGGCTGCCTGCAGGCGGGAGAGCTAAGCCTTaGGAAGCCCTCCCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: PPQGTGGSWPAVDGLPAGGRAKP*EALPLV
Trigger: GACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCC...GCCTGCAGGCAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp CTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCCAGCGGCACTGGGGGCTCCTaGCCAGCAGTAGATGGGCTG +
Preference number: 4 (lower is better)
Translates to: LWFCMVSTTTGHWGLLASGTGGS*PAVDGL
Trigger: CAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCC...GCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR TCA 90 bp ACCACCACAGGGCACTGGGGGCTCCTGGCCAGCAGTAGATGGGCTGCCTGCAGGGGGAGAGCTAAGCCTTaGGAAGCCCTCCCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: TTTGHWGLLASSRWAACRGRAKP*EALPLV
Trigger: GACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCC...CCTGCAGGCAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp GGCTGCTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCTGGCCAGCAGTAGATaGGCTGCCTGCAGGCGATCC +
Preference number: 4 (lower is better)
Translates to: GCSGSAWCPPPQGTGGSWLASSR*AACRRS
Trigger: GGATCGCCTGCAGGCAGCCCATCTACTGCTGGCCAG...CCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp TGGCTGCTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGACCACCACAGGGCACTaGGGGCTCCTGGCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: WLLWFCMVSTTTGHWGLLTTTGH*GLLASS
Trigger: ACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGT...CAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCAGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR GCA 90 bp CCACCACCACAGGGCACTGGGGGCTCCTGGCCAGCAGTAGATGGGCTGCCTGCAGTGTCCTCTAGTCGCTaGCAACGGACCCGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PPPQGTGGSWPAVDGLPAVSSSR*QRTRLL
Trigger: GAGAAGACGGGTCCGTTGGCAGCGACTAGAGGACAC...TGCAGGCAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000610607.4
CDS-3UTR CCA 90 bp TCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCCAGCACTGGCCAGCAGTAGATaGGCTGCCTGCAGGCGATCC +
Preference number: 4 (lower is better)
Translates to: SGSAWCPPPQGTGGSWPALASSR*AACRRS
Trigger: GGATCGCCTGCAGGCAGCCCATCTACTGCTGGCCAG...TGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp TCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCCAGCAGTAGATGGCACTGGGGGCTCCTaGCCAGCAGTAGATGGGCTG +
Preference number: 4 (lower is better)
Translates to: SAWCPPPQGTGGSWPAVDGTGGS*PAVDGL
Trigger: CAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCC...ATCTACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp ACAGGGCACTGGGGGCTCCTGGCCAGCAGTAGATGGGCTGCCTGCAGGCGATCCTGCTCTGGTTCTGCATaGTGTCCACCACCACAGGGC +
Preference number: 4 (lower is better)
Translates to: TGHWGLLASSRWAACRRSCSGSA*CPPPQG
Trigger: GCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCA...GGATCGCCTGCAGGCAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR GCA 90 bp ACCACCACAGGGCACTGGGGGCTCCTGGCCAGCAGTAGATGGGCTGCCTGCAGGTTACCCACGACCACATaGACAGCCACCTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: TTTGHWGLLASSRWAACRLPTTT*TATSKS
Trigger: GCTCTTGGAGGTGGCTGTGCATGTGGTCGTGGGTAA...CCTGCAGGCAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR GCA 90 bp TCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCCAGCACCTCTCAGGCAGTGCTaGGTAGAGCTGGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SGSAWCPPPQGTGGSWPAPLRQC*VELAAL
Trigger: CAGAGCAGCCAGCTCTACGCAGCACTGCCTGAGAGG...TGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR GCA 90 bp CTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCCAGCGTGTCCTCTAGTCGCTaGCAACGGACCCGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LWFCMVSTTTGHWGLLASVSSSR*QRTRLL
Trigger: GAGAAGACGGGTCCGTTGGCAGCGACTAGAGGACAC...GCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000610607.4
CDS-3UTR CCA 90 bp GCCTCTCAGGCAGTGCTGCGTAGAGCTGGCTGCTCTGGTTCTGCATGGTGTCCAGGCACTGGGGGCTCCTaGCCAGCAGTAGATGGGCTG +
Preference number: 4 (lower is better)
Translates to: ASQAVLRRAGCSGSAWCPGTGGS*PAVDGL
Trigger: CAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCC...TGGACACCATGCAGAACCAGAGCAGCCAGCTCTACGCAGCACTGCCTGAGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp CTGCTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCCTGCTCTGGTTCTGCATaGTGTCCACCACCACAGGGC +
Preference number: 4 (lower is better)
Translates to: LLWFCMVSTTTGHWGLLACSGSA*CPPPQG
Trigger: GCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCA...GGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR GCA 90 bp CTGCTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCCCTGCGTAGAGCTGGCTaGTCTGGTTCTGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: LLWFCMVSTTTGHWGLLALRRAG*SGSAWC
Trigger: ACACCATGCAGAACCAGAGCAGCCAGCTCTACGCAG...GGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR GCA 90 bp GCTGGCTGCTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCCTGCGTAGAGCTGGCTaGTCTGGTTCTGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: AGCSGSAWCPPPQGTGGSLRRAG*SGSAWC
Trigger: ACACCATGCAGAACCAGAGCAGCCAGCTCTACGCAG...GGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCAGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp CCTCTCAGGCAGTGCTGCGTAGAGCTGGCTGCTCTGGTTCTGCATGGTGTCCACCTGGCCAGCAGTAGATaGGCTGCCTGCAGGCGATCC +
Preference number: 4 (lower is better)
Translates to: PLRQCCVELAALVLHGVHLASSR*AACRRS
Trigger: GGATCGCCTGCAGGCAGCCCATCTACTGCTGGCCAG...GTGGACACCATGCAGAACCAGAGCAGCCAGCTCTACGCAGCACTGCCTGAGAGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR GCA 90 bp TCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCCAGCACTGCGTAGAGCTGGCTaGTCTGGTTCTGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: SGSAWCPPPQGTGGSWPALRRAG*SGSAWC
Trigger: ACACCATGCAGAACCAGAGCAGCCAGCTCTACGCAG...TGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR GCA 90 bp TGGCTGCTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGCTGCGTAGAGCTGGCTaGTCTGGTTCTGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: WLLWFCMVSTTTGHWGLLLRRAG*SGSAWC
Trigger: ACACCATGCAGAACCAGAGCAGCCAGCTCTACGCAG...CAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR GCA 90 bp CCTCTCAGGCAGTGCTGCGTAGAGCTGGCTGCTCTGGTTCTGCATGGTGTCCACCCTCTCAGGCAGTGCTaGGTAGAGCTGGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PLRQCCVELAALVLHGVHPLRQC*VELAAL
Trigger: CAGAGCAGCCAGCTCTACGCAGCACTGCCTGAGAGG...GTGGACACCATGCAGAACCAGAGCAGCCAGCTCTACGCAGCACTGCCTGAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR GCA 90 bp CCACCACAGGGCACTGGGGGCTCCTGGCCAGCAGTAGATGGGCTGCCTGCAGGCCCTTGTAGAGGATCCTaGCCTCCTGGATTATGTAGA +
Preference number: 4 (lower is better)
Translates to: PPQGTGGSWPAVDGLPAGPCRGS*PPGLCR
Trigger: TCTACATAATCCAGGAGGGCAGGATCCTCTACAAGG...GCCTGCAGGCAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp TGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCCAGCAGTAGATGGGCTGAGCACGAACTTCCTCTaGGTTGTAGTTCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: WCPPPQGTGGSWPAVDGLSTNFL*VVVPRA
Trigger: GGCCCTTGGAACTACAACCCAGAGGAAGTTCGTGCT...CAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp ACCACAGGGCACTGGGGGCTCCTGGCCAGCAGTAGATGGGCTGCCTGCAGGCGAGAGAAGCCCTCCCGTTaGTCACCTAGAATTGAGGTA +
Preference number: 4 (lower is better)
Translates to: TTGHWGLLASSRWAACRREKPSR*SPRIEV
Trigger: TACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTC...TCGCCTGCAGGCAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp GAGGATCCTGCCCTCCTGGATTATGTAGAGCCTCTCAGGCAGTGCTGCGTAGAGACCACCACAGGGCACTaGGGGCTCCTGGCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: EDPALLDYVEPLRQCCVETTTGH*GLLASS
Trigger: ACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGT...CTCTACGCAGCACTGCCTGAGAGGCTCTACATAATCCAGGAGGGCAGGATCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR TCA 90 bp TCCACCACCACAGGGCACTGGGGGCTCCTGGCCAGCAGTAGATGGGCTGCCTGCCCAGGATGTTCCGCTTaGCTCTGTCTGGAAACAATA +
Preference number: 4 (lower is better)
Translates to: STTTGHWGLLASSRWAACPGCSA*LCLETI
Trigger: TATTGTTTCCAGACAGAGTCAAGCGGAACATCCTGG...GCAGGCAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR TCA 90 bp AAGCCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCAGGGAGAGCTAAGCCTTaGGAAGCCCTCCCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: KPAGSQGELSLEKPSRWSGRAKP*EALPLV
Trigger: GACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCC...TGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp CCTGCCCTCCTGGATTATGTAGAGCCTCTCAGGCAGTGCTGCGTAGAGCTGGCTGAGCCTCTCAGGCAGTaGTGCGTAGAGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PALLDYVEPLRQCCVELAEPLRQ*CVELAA
Trigger: AGCAGCCAGCTCTACGCAGCACTGCCTGAGAGGCTC...AGCCAGCTCTACGCAGCACTGCCTGAGAGGCTCTACATAATCCAGGAGGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp GGCTGCTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGGAGAAGCCCTCCCGTTaGTCACCTAGAATTGAGGTA +
Preference number: 4 (lower is better)
Translates to: GCSGSAWCPPPQGTGGSWEKPSR*SPRIEV
Trigger: TACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTC...CCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp CCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTTGCTCTGGTTCTGCATaGTGTCCACCACCACAGGGC +
Preference number: 4 (lower is better)
Translates to: PAGSQGELSLEKPSRWSPCSGSA*CPPPQG
Trigger: GCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCA...AGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361921.8
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
ENST00000613679.4
CDS-3UTR TCA 90 bp ACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTGTTGCACCTCTGTCCTaGGAGGCGGACCACCGGGCA +
Preference number: 4 (lower is better)
Translates to: TALSKTVCRECGLQSGSSVAPLS*EADHRA
Trigger: TGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCAAC...ACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp CCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTTTACCCACGACCACATaGACAGCCACCTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: PAGSQGELSLEKPSRWSPLPTTT*TATSKS
Trigger: GCTCTTGGAGGTGGCTGTGCATGTGGTCGTGGGTAA...AGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp CCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTTTGGGTGCTGTGGCCTaGATTCCTCAGCTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: PAGSQGELSLEKPSRWSPLGAVA*IPQLGV
Trigger: AACTCCCAGCTGAGGAATGCAGGCCACAGCACCCAA...AGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp GATCCTGCCCTCCTGGATTATGTAGAGCCTCTCAGGCAGTGCTGCGTAGAGCTGGAGCCTCTCAGGCAGTaGTGCGTAGAGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: DPALLDYVEPLRQCCVELEPLRQ*CVELAA
Trigger: AGCAGCCAGCTCTACGCAGCACTGCCTGAGAGGCTC...CAGCTCTACGCAGCACTGCCTGAGAGGCTCTACATAATCCAGGAGGGCAGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp TCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGCTTCAGCCACAGCCCTaGCTGGGGCAGCCCCATCTC +
Preference number: 4 (lower is better)
Translates to: SQGELSLEKPSRWSPRIELQPQP*LGQPHL
Trigger: GAGATGGGGCTGCCCCAGCCAGGGCTGTGGCTGAAG...CTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp GTGCCTGTAGAGTGCAACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTGGCACTGGGGGCTCCTaGCCAGCAGTAGATGGGCTG +
Preference number: 4 (lower is better)
Translates to: VPVECNCSLKDRVQGMWSGTGGS*PAVDGL
Trigger: CAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCC...AGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGTTGCACTCTACAGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361921.8
ENST00000613679.4
CDS-3UTR CCA 90 bp AAGCCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCATGCTCTGGTTCTGCATaGTGTCCACCACCACAGGGC +
Preference number: 4 (lower is better)
Translates to: KPAGSQGELSLEKPSRWSCSGSA*CPPPQG
Trigger: GCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCA...TGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361921.8
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
ENST00000613679.4
CDS-3UTR TCA 90 bp TCTGAGCTAGTGATTCAGCTAGGGACACAGGTCAAGGGTAAAAGCCAGCTGGGTGTTGCACCTCTGTCCTaGGAGGCGGACCACCGGGCA +
Preference number: 4 (lower is better)
Translates to: SELVIQLGTQVKGKSQLGVAPLS*EADHRA
Trigger: TGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCAAC...ACCCAGCTGGCTTTTACCCTTGACCTGTGTCCCTAGCTGAATCACTAGCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp CCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTTTGGCAAGGAGAGGATaGCTGCCTCCTCCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: PAGSQGELSLEKPSRWSPLARRG*LPPPVS
Trigger: AGAAACAGGAGGAGGCAGTCATCCTCTCCTTGCCAA...AGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp GCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTGTCGAGCCTCTCAGGCAGTaGTGCGTAGAGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ALSKTVCRECGLQSGSSVEPLRQ*CVELAA
Trigger: AGCAGCCAGCTCTACGCAGCACTGCCTGAGAGGCTC...GACACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361921.8
ENST00000613679.4
CDS-3UTR CCA 90 bp GGCCAGATTTACCCTTGTAGAGGATCCTGCCCTCCTGGATTATGTAGAGCCTCTCTTCAGCCACAGCCCTaGCTGGGGCAGCCCCATCTC +
Preference number: 4 (lower is better)
Translates to: GQIYPCRGSCPPGLCRASLQPQP*LGQPHL
Trigger: GAGATGGGGCTGCCCCAGCCAGGGCTGTGGCTGAAG...AGAGGCTCTACATAATCCAGGAGGGCAGGATCCTCTACAAGGGTAAATCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp GCTGCTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCCCGCTTGACTCTGTCTaGAAACAATATCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: AALVLHGVHHHRALGAPGPLDSV*KQYQKH
Trigger: GTGCTTCTGATATTGTTTCCAGACAGAGTCAAGCGG...GCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp GGCTGCTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCCGCTTGACTCTGTCTaGAAACAATATCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: GCSGSAWCPPPQGTGGSWPLDSV*KQYQKH
Trigger: GTGCTTCTGATATTGTTTCCAGACAGAGTCAAGCGG...CCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp GCCTCTCAGGCAGTGCTGCGTAGAGCTGGCTGCTCTGGTTCTGCATGGTGTCCAAGCACGAACTTCCTCTaGGTTGTAGTTCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: ASQAVLRRAGCSGSAWCPSTNFL*VVVPRA
Trigger: GGCCCTTGGAACTACAACCCAGAGGAAGTTCGTGCT...TGGACACCATGCAGAACCAGAGCAGCCAGCTCTACGCAGCACTGCCTGAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp TCTGAGCTAGTGATTCAGCTAGGGACACAGGTCAAGGGTAAAAGCCAGCTGGGTACCACCACAGGGCACTaGGGGCTCCTGGCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: SELVIQLGTQVKGKSQLGTTTGH*GLLASS
Trigger: ACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGT...ACCCAGCTGGCTTTTACCCTTGACCTGTGTCCCTAGCTGAATCACTAGCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361921.8
ENST00000613679.4
CDS-3UTR CCA 90 bp GCCAGATTTACCCTTGTAGAGGATCCTGCCCTCCTGGATTATGTAGAGCCTCTCACCACCACAGGGCACTaGGGGCTCCTGGCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: ARFTLVEDPALLDYVEPLTTTGH*GLLASS
Trigger: ACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGT...GAGAGGCTCTACATAATCCAGGAGGGCAGGATCCTCTACAAGGGTAAATCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR TCA 90 bp AGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTGTTGCACCTCTGTCCTaGGAGGCGGACCACCGGGCA +
Preference number: 4 (lower is better)
Translates to: SLEKPSRWSPRIEVSVQIVAPLS*EADHRA
Trigger: TGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCAAC...AATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322679.10
ENST00000527060.5
ENST00000528946.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR TCA 90 bp AGATTTACCCTTGTAGAGGATCCTGCCCTCCTGGATTATGTAGAGCCTCTCAGGGTTGCACCTCTGTCCTaGGAGGCGGACCACCGGGCA +
Preference number: 4 (lower is better)
Translates to: RFTLVEDPALLDYVEPLRVAPLS*EADHRA
Trigger: TGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCAAC...CCTGAGAGGCTCTACATAATCCAGGAGGGCAGGATCCTCTACAAGGGTAAATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000610607.4
CDS-3UTR GCA 90 bp CCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTCCTGTAGAGTGCAACTaGTCTCTCAAAGACCGTGTG +
Preference number: 4 (lower is better)
Translates to: PAGSQGELSLEKPSRWSPPVECN*SLKDRV
Trigger: CACACGGTCTTTGAGAGAGCAGTTGCACTCTACAGG...AGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp TGCATAAACTCCCAAATGTTGCACCTCTGTCCTGAGAGGCGGACCACCGGGCAGTGGCTGCTCTGGTTCTaGATGGTGTCCACCACCACA +
Preference number: 4 (lower is better)
Translates to: CINSQMLHLCPERRTTGQWLLWF*MVSTTT
Trigger: TGTGGTGGTGGACACCATGCAGAACCAGAGCAGCCA...CTGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCAACATTTGGGAGTTTATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527060.5
ENST00000529329.1
CDS-3UTR GCA 90 bp ACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTGAGCCTCTCAGGCAGTaGTGCGTAGAGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TALSKTVCRECGLQSGSSEPLRQ*CVELAA
Trigger: AGCAGCCAGCTCTACGCAGCACTGCCTGAGAGGCTC...ACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361921.8
ENST00000613679.4
CDS-3UTR GCA 90 bp CTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCCAGCAAAGCCCAGCCATCTTaGATAAACTCCCAAATGTTG +
Preference number: 4 (lower is better)
Translates to: LWFCMVSTTTGHWGLLASKAQPS*INSQML
Trigger: CAACATTTGGGAGTTTATGCAAGATGGCTGGGCTTT...GCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529329.1
CDS-3UTR CCA 90 bp AAGCCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCAGGTATCCAGTTGTCGTaGCTGAAATGGGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: KPAGSQGELSLEKPSRWSGIQLS*LKWGFL
Trigger: CAGGAACCCCCATTTCAGCCACGACAACTGGATACC...TGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000525044.5
ENST00000528946.5
ENST00000530084.5
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp TCCTGCCCTCCTGGATTATGTAGAGCCTCTCAGGCAGTGCTGCGTAGAGCTGGCGGTATCCAGTTGTCGTaGCTGAAATGGGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SCPPGLCRASQAVLRRAGGIQLS*LKWGFL
Trigger: CAGGAACCCCCATTTCAGCCACGACAACTGGATACC...GCCAGCTCTACGCAGCACTGCCTGAGAGGCTCTACATAATCCAGGAGGGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530084.5
CDS-3UTR CCA 90 bp CCTGCCCTCCTGGATTATGTAGAGCCTCTCAGGCAGTGCTGCGTAGAGCTGGCTAGGGTAAAAGCCAGCTaGGTCTCAGGGAGAGCTAAG +
Preference number: 4 (lower is better)
Translates to: PALLDYVEPLRQCCVELARVKAS*VSGRAK
Trigger: CTTAGCTCTCCCTGAGACCCAGCTGGCTTTTACCCT...AGCCAGCTCTACGCAGCACTGCCTGAGAGGCTCTACATAATCCAGGAGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp TCTGAGCTAGTGATTCAGCTAGGGACACAGGTCAAGGGTAAAAGCCAGCTGGGTCTGGCCAGCAGTAGATaGGCTGCCTGCAGGCGATCC +
Preference number: 4 (lower is better)
Translates to: SELVIQLGTQVKGKSQLGLASSR*AACRRS
Trigger: GGATCGCCTGCAGGCAGCCCATCTACTGCTGGCCAG...ACCCAGCTGGCTTTTACCCTTGACCTGTGTCCCTAGCTGAATCACTAGCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361921.8
ENST00000613679.4
CDS-3UTR TCA 90 bp CTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTGTCAGGTCCAGTTGTCGTGGCTaGAATGGGGGTTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LSKTVCRECGLQSGSSVRSSCRG*NGGSWS
Trigger: TGACCAGGAACCCCCATTTCAGCCACGACAACTGGA...CCTGACACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp CTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGGGGAGAGCTAAGCCTTaGGAAGCCCTCCCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: LSLEKPSRWSPRIEVSVQGRAKP*EALPLV
Trigger: GACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCC...CTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp GGCCAGATTTACCCTTGTAGAGGATCCTGCCCTCCTGGATTATGTAGAGCCTCTGGGAGAGCTAAGCCTTaGGAAGCCCTCCCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: GQIYPCRGSCPPGLCRASGRAKP*EALPLV
Trigger: GACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCC...AGAGGCTCTACATAATCCAGGAGGGCAGGATCCTCTACAAGGGTAAATCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp GAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTCTTCAGCCACAGCCCTaGCTGGGGCAGCCCCATCTC +
Preference number: 4 (lower is better)
Translates to: EKPSRWSPRIEVSVQINCLQPQP*LGQPHL
Trigger: GAGATGGGGCTGCCCCAGCCAGGGCTGTGGCTGAAG...ACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR CCA 90 bp TGCATAAACTCCCAAATGTTGCACCTCTGTCCTGAGAGGCGGACCACCGGGCAGAGCACGAACTTCCTCTaGGTTGTAGTTCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: CINSQMLHLCPERRTTGQSTNFL*VVVPRA
Trigger: GGCCCTTGGAACTACAACCCAGAGGAAGTTCGTGCT...CTGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCAACATTTGGGAGTTTATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527060.5
ENST00000529329.1
CDS-3UTR CCA 90 bp GCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTGTCCTTGATTGGGTGCTGTaGCCTGCATTCCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ALSKTVCRECGLQSGSSVLDWVL*PAFLSW
Trigger: CCAGCTGAGGAATGCAGGCCACAGCACCCAATCAAG...GACACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp AAGCCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCATGGTATCAGAGTGGCTaGAGAGAGATACCGTACCTC +
Preference number: 4 (lower is better)
Translates to: KPAGSQGELSLEKPSRWSWYQSG*REIPYL
Trigger: GAGGTACGGTATCTCTCTCCAGCCACTCTGATACCA...TGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp TGCCTGCAGGCGATCCTGAAGGTTCTGGTGATTTCTGATGTCCATGTTGTTCTTACCACCACAGGGCACTaGGGGCTCCTGGCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: CLQAILKVLVISDVHVVLTTTGH*GLLASS
Trigger: ACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGT...AAGAACAACATGGACATCAGAAATCACCAGAACCTTCAGGATCGCCTGCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR TCA 90 bp TCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGTCCAGTTGTCGTGGCTaGAATGGGGGTTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SQGELSLEKPSRWSPRIESSCRG*NGGSWS
Trigger: TGACCAGGAACCCCCATTTCAGCCACGACAACTGGA...CTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000525044.5
ENST00000528946.5
ENST00000530084.5
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp AGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGGGGAGAGCTAAGCCTTaGGAAGCCCTCCCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: SPPVGHLELRYLSRLTVEGRAKP*EALPLV
Trigger: GACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCC...CTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR TCA 90 bp CCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTTCAAAGATGGTAAAGTaGGTACTCTCCTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PAGSQGELSLEKPSRWSPSKMVK*VLSSSL
Trigger: CAGGGAAGAGGAGAGTACTCACTTTACCATCTTTGA...AGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp AAGCCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTTGTAGAGGATCCTaGCCTCCTGGATTATGTAGA +
Preference number: 4 (lower is better)
Translates to: KPAGSQGELSLEKPSRWSPCRGS*PPGLCR
Trigger: TCTACATAATCCAGGAGGGCAGGATCCTCTACAAGG...TGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361921.8
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
ENST00000613679.4
CDS-3UTR CCA 90 bp TCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGCTTGATTGGGTGCTGTaGCCTGCATTCCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SQGELSLEKPSRWSPRIELDWVL*PAFLSW
Trigger: CCAGCTGAGGAATGCAGGCCACAGCACCCAATCAAG...CTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp AAGCCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCATCTTCAACAGGGAACTaGCCTGAACAGCTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: KPAGSQGELSLEKPSRWSSSTGN*PEQLKC
Trigger: ACACTTGAGCTGTTCAGGCCAGTTCCCTGTTGAAGA...TGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp AAGCCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCATCAAGGTTATGCTTTTaGGAAGCCAACCCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: KPAGSQGELSLEKPSRWSSRLCF*EANPPF
Trigger: GAAGGGAGGGTTGGCTTCCCAAAAGCATAACCTTGA...TGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp CTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACCTGGCCAGCAGTAGATaGGCTGCCTGCAGGCGATCC +
Preference number: 4 (lower is better)
Translates to: LEKPSRWSPRIEVSVQINLASSR*AACRRS
Trigger: GGATCGCCTGCAGGCAGCCCATCTACTGCTGGCCAG...GTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp TCTGAGCTAGTGATTCAGCTAGGGACACAGGTCAAGGGTAAAAGCCAGCTGGGTTGCTCTGGTTCTGCATaGTGTCCACCACCACAGGGC +
Preference number: 4 (lower is better)
Translates to: SELVIQLGTQVKGKSQLGCSGSA*CPPPQG
Trigger: GCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCA...ACCCAGCTGGCTTTTACCCTTGACCTGTGTCCCTAGCTGAATCACTAGCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361921.8
ENST00000613679.4
3UTR CAA 72 bp TTAAAAGCCCAGCCATCTTGCATAAACTCCCAAATGTaGCACCTCTGTCCTGAGAGGCGGACCACCGGGCAG +
Preference number: 4 (lower is better)
Translates to: LKAQPSCINSQM*HLCPERRTTGQ
Trigger: CTGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCAACATTTGGGAGTTTATGCAAGATGGCTGGGCTTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529329.1
CDS-3UTR TCA 90 bp CTGCAGGCGATCCTGAAGGTTCTGGTGATTTCTGATGTCCATGTTGTTCTTAAAGTTGCACCTCTGTCCTaGGAGGCGGACCACCGGGCA +
Preference number: 4 (lower is better)
Translates to: LQAILKVLVISDVHVVLKVAPLS*EADHRA
Trigger: TGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCAAC...TTTAAGAACAACATGGACATCAGAAATCACCAGAACCTTCAGGATCGCCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000610607.4
CDS-3UTR TCA 90 bp GTGCCTGTAGAGTGCAACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTTTGGCAAGGAGAGGATaGCTGCCTCCTCCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: VPVECNCSLKDRVQGMWSLARRG*LPPPVS
Trigger: AGAAACAGGAGGAGGCAGTCATCCTCTCCTTGCCAA...AGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGTTGCACTCTACAGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp CTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGGTGTCCTCTAGTCGCTaGCAACGGACCTTCAAGACG +
Preference number: 4 (lower is better)
Translates to: LSLEKPSRWSPRIEVSVQVSSSR*QRTFKT
Trigger: CGTCTTGAAGGTCCGTTGGCAGCGACTAGAGGACAC...CTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000528946.5
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp AAGCCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCAGTTTGGTCAAGGTTATaGTTTTGGGAAGCCAACCCT +
Preference number: 4 (lower is better)
Translates to: KPAGSQGELSLEKPSRWSVWSRL*FWEANP
Trigger: AGGGTTGGCTTCCCAAAAGCATAACCTTGACCAAAC...TGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp CCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTCCTCTCAGGCAGTGCTaGGTAGAGCTGGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PPVGHLELRYLSRLTVELPLRQC*VELAAL
Trigger: CAGAGCAGCCAGCTCTACGCAGCACTGCCTGAGAGG...AAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
CDS-3UTR GCA 90 bp GAGGATCCTGCCCTCCTGGATTATGTAGAGCCTCTCAGGCAGTGCTGCGTAGAGCCTTGTAGAGGATCCTaGCCTCCTGGATTATGTAGA +
Preference number: 4 (lower is better)
Translates to: EDPALLDYVEPLRQCCVEPCRGS*PPGLCR
Trigger: TCTACATAATCCAGGAGGGCAGGATCCTCTACAAGG...CTCTACGCAGCACTGCCTGAGAGGCTCTACATAATCCAGGAGGGCAGGATCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp CGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCCACTTCAGCCACAGCCCTaGCTGGGGCAGCCCCATCTC +
Preference number: 4 (lower is better)
Translates to: RWSPRIEVSVQINCGAFPLQPQP*LGQPHL
Trigger: GAGATGGGGCTGCCCCAGCCAGGGCTGTGGCTGAAG...TGGAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR CCA 90 bp AAGCCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCGCTTGACTCTGTCTaGAAACAATATCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: KPAGSQGELSLEKPSRWSPLDSV*KQYQKH
Trigger: GTGCTTCTGATATTGTTTCCAGACAGAGTCAAGCGG...TGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp TACCCTTGTAGAGGATCCTGCCCTCCTGGATTATGTAGAGCCTCTCAGGCAGTGTTGTCGTGGCTGAAATaGGGGTTCCTGGTCATACCC +
Preference number: 4 (lower is better)
Translates to: YPCRGSCPPGLCRASQAVLSWLK*GFLVIP
Trigger: GGGTATGACCAGGAACCCCCATTTCAGCCACGACAA...CACTGCCTGAGAGGCTCTACATAATCCAGGAGGGCAGGATCCTCTACAAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530084.5
CDS-3UTR CCA 90 bp ACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTTTGTCGTGGCTGAAATaGGGGTTCCTGGTCATACCC +
Preference number: 4 (lower is better)
Translates to: TALSKTVCRECGLQSGSSLSWLK*GFLVIP
Trigger: GGGTATGACCAGGAACCCCCATTTCAGCCACGACAA...ACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp TCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGGTATCCAGTTGTCGTaGCTGAAATGGGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SQGELSLEKPSRWSPRIEGIQLS*LKWGFL
Trigger: CAGGAACCCCCATTTCAGCCACGACAACTGGATACC...CTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000525044.5
ENST00000528946.5
ENST00000530084.5
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp GTGCCTGTAGAGTGCAACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTGGTATCCAGTTGTCGTaGCTGAAATGGGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: VPVECNCSLKDRVQGMWSGIQLS*LKWGFL
Trigger: CAGGAACCCCCATTTCAGCCACGACAACTGGATACC...AGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGTTGCACTCTACAGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp AAGCCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCAAGGGATGTGTTACCATaGAAACTCACCCATCATCAC +
Preference number: 4 (lower is better)
Translates to: KPAGSQGELSLEKPSRWSRDVLP*KLTHHH
Trigger: GTGATGATGGGTGAGTTTCCATGGTAACACATCCCT...TGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp AGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTTCCAGTTGTCGTGGCTaGAATGGGGGTTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SLEKPSRWSPRIEVSVQISSCRG*NGGSWS
Trigger: TGACCAGGAACCCCCATTTCAGCCACGACAACTGGA...AATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000528946.5
ENST00000530084.5
ENST00000617230.2
CDS-3UTR TCA 90 bp AGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGTCCAGTTGTCGTGGCTaGAATGGGGGTTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SPPVGHLELRYLSRLTVESSCRG*NGGSWS
Trigger: TGACCAGGAACCCCCATTTCAGCCACGACAACTGGA...CTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000528946.5
ENST00000530084.5
ENST00000617230.2
CDS-3UTR TCA 90 bp TCCTGCCCTCCTGGATTATGTAGAGCCTCTCAGGCAGTGCTGCGTAGAGCTGGCAGAAATACTGGGTGCTaGAAAAGGTTGGTATCCAGT +
Preference number: 4 (lower is better)
Translates to: SCPPGLCRASQAVLRRAGRNTGC*KRLVSS
Trigger: ACTGGATACCAACCTTTTTCAGCACCCAGTATTTCT...GCCAGCTCTACGCAGCACTGCCTGAGAGGCTCTACATAATCCAGGAGGGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530084.5
CDS-3UTR TCA 90 bp TCCTCAGCTGGGAGTTGTTTGCTTAGATCAGAAAAATCTGAGCTAGTGATTCAGGTTGCACCTCTGTCCTaGGAGGCGGACCACCGGGCA +
Preference number: 4 (lower is better)
Translates to: SSAGSCLLRSEKSELVIQVAPLS*EADHRA
Trigger: TGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCAAC...CTGAATCACTAGCTCAGATTTTTCTGATCTAAGCAAACAACTCCCAGCTGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp AAGCCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCAGAAGGAATGCCAGCTTaGATTACTTGGTATCAGAGT +
Preference number: 4 (lower is better)
Translates to: KPAGSQGELSLEKPSRWSEGMPA*ITWYQS
Trigger: ACTCTGATACCAAGTAATTCAAGCTGGCATTCCTTC...TGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp CCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTGTGTCCTCTAGTCGCTaGCAACGGACCTTCAAGACG +
Preference number: 4 (lower is better)
Translates to: PSRWSPRIEVSVQINCGAVSSSR*QRTFKT
Trigger: CGTCTTGAAGGTCCGTTGGCAGCGACTAGAGGACAC...AGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322679.10
ENST00000528946.5
ENST00000617230.2
CDS-3UTR GCA 90 bp AGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGTTGGGTGCTGTGGCCTaGATTCCTCAGCTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: SPPVGHLELRYLSRLTVELGAVA*IPQLGV
Trigger: AACTCCCAGCTGAGGAATGCAGGCCACAGCACCCAA...CTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR GCA 90 bp CTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTGTCAGGTTTGTCTTGATTGGGTaGTGTGGCCTGCATTCCTCA +
Preference number: 4 (lower is better)
Translates to: LSKTVCRECGLQSGSSVRFVLIG*CGLHSS
Trigger: TGAGGAATGCAGGCCACAGCACCCAATCAAGACAAA...CCTGACACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp GTGCCTGTAGAGTGCAACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCTCTCAAAGACCGTGTaGAGGGAATGTGGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: VPVECNCSLKDRVQGMWSLSKTV*RECGLQ
Trigger: TTGGAGACCACATTCCCTGCACACGGTCTTTGAGAG...AGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGTTGCACTCTACAGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp AGATTTACCCTTGTAGAGGATCCTGCCCTCCTGGATTATGTAGAGCCTCTCAGGTGGCTGCTCTGGTTCTaGATGGTGTCCACCACCACA +
Preference number: 4 (lower is better)
Translates to: RFTLVEDPALLDYVEPLRWLLWF*MVSTTT
Trigger: TGTGGTGGTGGACACCATGCAGAACCAGAGCAGCCA...CCTGAGAGGCTCTACATAATCCAGGAGGGCAGGATCCTCTACAAGGGTAAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR GCA 90 bp CCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCGAGCCTCTCAGGCAGTaGTGCGTAGAGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PVGHLELRYLSRLTVELFEPLRQ*CVELAA
Trigger: AGCAGCCAGCTCTACGCAGCACTGCCTGAGAGGCTC...GAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
CDS-3UTR GCA 90 bp CTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTGTCAGGCCTTGTAGAGGATCCTaGCCTCCTGGATTATGTAGA +
Preference number: 4 (lower is better)
Translates to: LSKTVCRECGLQSGSSVRPCRGS*PPGLCR
Trigger: TCTACATAATCCAGGAGGGCAGGATCCTCTACAAGG...CCTGACACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361921.8
ENST00000613679.4
CDS-3UTR CCA 90 bp TCTGAGCTAGTGATTCAGCTAGGGACACAGGTCAAGGGTAAAAGCCAGCTGGGTGGTATCCAGTTGTCGTaGCTGAAATGGGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SELVIQLGTQVKGKSQLGGIQLS*LKWGFL
Trigger: CAGGAACCCCCATTTCAGCCACGACAACTGGATACC...ACCCAGCTGGCTTTTACCCTTGACCTGTGTCCCTAGCTGAATCACTAGCTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp CTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGAGCACGAACTTCCTCTaGGTTGTAGTTCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: LSLEKPSRWSPRIEVSVQSTNFL*VVVPRA
Trigger: GGCCCTTGGAACTACAACCCAGAGGAAGTTCGTGCT...CTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp GCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTACTTGATTGGGTGCTGTaGCCTGCATTCCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ALRSPPVGHLELRYLSRLLDWVL*PAFLSW
Trigger: CCAGCTGAGGAATGCAGGCCACAGCACCCAATCAAG...TAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR CCA 90 bp ACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTATGTGGTCTCCAAAGTaGGAGCAGTGTCAGGCTCTA +
Preference number: 4 (lower is better)
Translates to: TALSKTVCRECGLQSGSSMWSPK*EQCQAL
Trigger: TAGAGCCTGACACTGCTCCCACTTTGGAGACCACAT...ACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp GTGCCTGTAGAGTGCAACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTTGGTATCAGAGTGGCTaGAGAGAGATACCGTACCTC +
Preference number: 4 (lower is better)
Translates to: VPVECNCSLKDRVQGMWSWYQSG*REIPYL
Trigger: GAGGTACGGTATCTCTCTCCAGCCACTCTGATACCA...AGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGTTGCACTCTACAGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp AAGCCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACTGGTGCCTATTGTTTaGTTTGGTCAAGGTTATGCT +
Preference number: 4 (lower is better)
Translates to: KPAGSQGELSLEKPSRWSLVPIV*FGQGYA
Trigger: AGCATAACCTTGACCAAACCAAACAATAGGCACCAG...TGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp GTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCCAGGGGAGAGCTAAGCCTTaGGAAGCCCTCCCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: VGHLELRYLSRLTVELFQGRAKP*EALPLV
Trigger: GACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCC...CTGGAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR TCA 90 bp CCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTGGCAAGGAGAGGATaGCTGCCTCCTCCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: PSRWSPRIEVSVQINCGALARRG*LPPPVS
Trigger: AGAAACAGGAGGAGGCAGTCATCCTCTCCTTGCCAA...AGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR TCA 90 bp GCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTGTCTTCTGCATAACTGAATaGCAGCATTGCTGGTGCCTA +
Preference number: 4 (lower is better)
Translates to: ALSKTVCRECGLQSGSSVFCITE*QHCWCL
Trigger: TAGGCACCAGCAATGCTGTCATTCAGTTATGCAGAA...GACACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp GTGCCTGTAGAGTGCAACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTGAGCTTCTGCATAACTaGATGACAGCATTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VPVECNCSLKDRVQGMWSELLHN*MTALLV
Trigger: CACCAGCAATGCTGTCATTCAGTTATGCAGAAGCTC...AGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGTTGCACTCTACAGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp CTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTTACCCACGACCACATaGACAGCCACCTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: LEKPSRWSPRIEVSVQINLPTTT*TATSKS
Trigger: GCTCTTGGAGGTGGCTGTGCATGTGGTCGTGGGTAA...GTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR GCA 90 bp GAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCTCTCAAAGACCGTGTaGAGGGAATGTGGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: ELSLEKPSRWSPRIEVSVLSKTV*RECGLQ
Trigger: TTGGAGACCACATTCCCTGCACACGGTCTTTGAGAG...GACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp TCTGAGCTAGTGATTCAGCTAGGGACACAGGTCAAGGGTAAAAGCCAGCTGGGTCTCTCAAAGACCGTGTaGAGGGAATGTGGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: SELVIQLGTQVKGKSQLGLSKTV*RECGLQ
Trigger: TTGGAGACCACATTCCCTGCACACGGTCTTTGAGAG...ACCCAGCTGGCTTTTACCCTTGACCTGTGTCCCTAGCTGAATCACTAGCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp GAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTTGGCTGCTCTGGTTCTaGATGGTGTCCACCACCACA +
Preference number: 4 (lower is better)
Translates to: EKPSRWSPRIEVSVQINCWLLWF*MVSTTT
Trigger: TGTGGTGGTGGACACCATGCAGAACCAGAGCAGCCA...ACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
CDS-3UTR GCA 90 bp CTGCAGGCGATCCTGAAGGTTCTGGTGATTTCTGATGTCCATGTTGTTCTTAAAGAGCCTCTCAGGCAGTaGTGCGTAGAGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LQAILKVLVISDVHVVLKEPLRQ*CVELAA
Trigger: AGCAGCCAGCTCTACGCAGCACTGCCTGAGAGGCTC...TTTAAGAACAACATGGACATCAGAAATCACCAGAACCTTCAGGATCGCCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR GCA 90 bp CCTCTGGGTTGTAGTTCCAAGGGCCAGATTTACCCTTGTAGAGGATCCTGCCCTCCTTGTAGAGGATCCTaGCCTCCTGGATTATGTAGA +
Preference number: 4 (lower is better)
Translates to: PLGCSSKGQIYPCRGSCPPCRGS*PPGLCR
Trigger: TCTACATAATCCAGGAGGGCAGGATCCTCTACAAGG...AGGGCAGGATCCTCTACAAGGGTAAATCTGGCCCTTGGAACTACAACCCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR GCA 90 bp CCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCGTGTCCTCTAGTCGCTaGCAACGGACCCGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PVGHLELRYLSRLTVELFVSSSR*QRTRLL
Trigger: GAGAAGACGGGTCCGTTGGCAGCGACTAGAGGACAC...GAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527060.5
ENST00000610607.4
CDS-3UTR CCA 90 bp AGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTTTGTCGTGGCTGAAATaGGGGTTCCTGGTCATACCC +
Preference number: 4 (lower is better)
Translates to: SLEKPSRWSPRIEVSVQILSWLK*GFLVIP
Trigger: GGGTATGACCAGGAACCCCCATTTCAGCCACGACAA...AATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000528946.5
ENST00000530084.5
ENST00000617230.2
CDS-3UTR CCA 90 bp CCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTGTCGTGGCTGAAATaGGGGTTCCTGGTCATACCC +
Preference number: 4 (lower is better)
Translates to: PSRWSPRIEVSVQINCGALSWLK*GFLVIP
Trigger: GGGTATGACCAGGAACCCCCATTTCAGCCACGACAA...AGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000528946.5
ENST00000530084.5
ENST00000617230.2
CDS-3UTR CCA 90 bp CCTCTGGGTTGTAGTTCCAAGGGCCAGATTTACCCTTGTAGAGGATCCTGCCCTGGTGCTGAAAAAGGTTaGTATCCAGTTGTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: PLGCSSKGQIYPCRGSCPGAEKG*YPVVVA
Trigger: AGCCACGACAACTGGATACCAACCTTTTTCAGCACC...AGGGCAGGATCCTCTACAAGGGTAAATCTGGCCCTTGGAACTACAACCCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530084.5
CDS-3UTR CCA 90 bp CCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTAGCACGAACTTCCTCTaGGTTGTAGTTCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: PSRWSPRIEVSVQINCGASTNFL*VVVPRA
Trigger: GGCCCTTGGAACTACAACCCAGAGGAAGTTCGTGCT...AGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR CCA 90 bp AGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAGGGTAAAAGCCAGCTaGGTCTCAGGGAGAGCTAAG +
Preference number: 4 (lower is better)
Translates to: SLEKPSRWSPRIEVSVQIRVKAS*VSGRAK
Trigger: CTTAGCTCTCCCTGAGACCCAGCTGGCTTTTACCCT...AATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR CCA 90 bp GCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTGTCACAATTTGTCTTGATTaGGTGCTGTGGCCTGCATTC +
Preference number: 4 (lower is better)
Translates to: ALSKTVCRECGLQSGSSVTICLD*VLWPAF
Trigger: GAATGCAGGCCACAGCACCCAATCAAGACAAATTGT...GACACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp GTGCCTGTAGAGTGCAACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTTCTTCAACAGGGAACTaGCCTGAACAGCTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: VPVECNCSLKDRVQGMWSSSTGN*PEQLKC
Trigger: ACACTTGAGCTGTTCAGGCCAGTTCCCTGTTGAAGA...AGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGTTGCACTCTACAGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp CTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTGTCAGGAGGGATGTGTTACCATaGAAACTCACCCATCATCAC +
Preference number: 4 (lower is better)
Translates to: LSKTVCRECGLQSGSSVRRDVLP*KLTHHH
Trigger: GTGATGATGGGTGAGTTTCCATGGTAACACATCCCT...CCTGACACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp TTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCATCATAAAGGCACTGGGGGCTCCTaGCCAGCAGTAGATGGGCTG +
Preference number: 4 (lower is better)
Translates to: FLLNQVTAVCTLGCGHHKGTGGS*PAVDGL
Trigger: CAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCC...TTTATGATGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361921.8
ENST00000613679.4
CDS-3UTR TCA 90 bp CTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGCCAGGATGTTCCGCTTaGCTCTGTCTGGAAACAATA +
Preference number: 4 (lower is better)
Translates to: LSLEKPSRWSPRIEVSVQPGCSA*LCLETI
Trigger: TATTGTTTCCAGACAGAGTCAAGCGGAACATCCTGG...CTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp CCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTAACAGGGAACTGGCCTaGACAGCTCAAGTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: PSRWSPRIEVSVQINCGANRELA*TAQVLL
Trigger: AAGCAACACTTGAGCTGTTCAGGCCAGTTCCCTGTT...AGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR TCA 90 bp TCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGTCAAAGATGGTAAAGTaGGTACTCTCCTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SQGELSLEKPSRWSPRIESKMVK*VLSSSL
Trigger: CAGGGAAGAGGAGAGTACTCACTTTACCATCTTTGA...CTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp GGAACTGTTTCTTCAACAGGGAACTGGCCTGAACAGCTCAAGTGTTGCTTCATTGTGTCCTCTAGTCGCTaGCAACGGACCTTCAAGACG +
Preference number: 4 (lower is better)
Translates to: GTVSSTGNWPEQLKCCFIVSSSR*QRTFKT
Trigger: CGTCTTGAAGGTCCGTTGGCAGCGACTAGAGGACAC...AATGAAGCAACACTTGAGCTGTTCAGGCCAGTTCCCTGTTGAAGAAACAGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp CCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTCCTGTAGAGTGCAACTaGTCTCTCAAAGACCGTGTG +
Preference number: 4 (lower is better)
Translates to: PSRWSPRIEVSVQINCGAPVECN*SLKDRV
Trigger: CACACGGTCTTTGAGAGAGCAGTTGCACTCTACAGG...AGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR GCA 90 bp GTGCCTGTAGAGTGCAACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTGTTTGGTCAAGGTTATaGTTTTGGGAAGCCAACCCT +
Preference number: 4 (lower is better)
Translates to: VPVECNCSLKDRVQGMWSVWSRL*FWEANP
Trigger: AGGGTTGGCTTCCCAAAAGCATAACCTTGACCAAAC...AGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGTTGCACTCTACAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp GGAACTGTTTCTTCAACAGGGAACTGGCCTGAACAGCTCAAGTGTTGCTTCATTTGGCTGCTCTGGTTCTaGATGGTGTCCACCACCACA +
Preference number: 4 (lower is better)
Translates to: GTVSSTGNWPEQLKCCFIWLLWF*MVSTTT
Trigger: TGTGGTGGTGGACACCATGCAGAACCAGAGCAGCCA...AATGAAGCAACACTTGAGCTGTTCAGGCCAGTTCCCTGTTGAAGAAACAGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361921.8
ENST00000613679.4
CDS-3UTR CCA 90 bp GGGATGTGTTACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTTTGTCGTGGCTGAAATaGGGGTTCCTGGTCATACCC +
Preference number: 4 (lower is better)
Translates to: GMCYHGNSPIITTNVDRFLSWLK*GFLVIP
Trigger: GGGTATGACCAGGAACCCCCATTTCAGCCACGACAA...AAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGTAACACATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp CTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTTGTCGTGGCTGAAATaGGGGTTCCTGGTCATACCC +
Preference number: 4 (lower is better)
Translates to: LEKPSRWSPRIEVSVQINLSWLK*GFLVIP
Trigger: GGGTATGACCAGGAACCCCCATTTCAGCCACGACAA...GTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000528946.5
ENST00000530084.5
ENST00000617230.2
CDS-3UTR CCA 90 bp TCTGAGCTAGTGATTCAGCTAGGGACACAGGTCAAGGGTAAAAGCCAGCTGGGTGGTGCTGAAAAAGGTTaGTATCCAGTTGTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: SELVIQLGTQVKGKSQLGGAEKG*YPVVVA
Trigger: AGCCACGACAACTGGATACCAACCTTTTTCAGCACC...ACCCAGCTGGCTTTTACCCTTGACCTGTGTCCCTAGCTGAATCACTAGCTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp GAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCGGTGCTGAAAAAGGTTaGTATCCAGTTGTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: ELSLEKPSRWSPRIEVSVGAEKG*YPVVVA
Trigger: AGCCACGACAACTGGATACCAACCTTTTTCAGCACC...GACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000525044.5
ENST00000528946.5
ENST00000530084.5
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp CTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGGGTGCTGAAAAAGGTTaGTATCCAGTTGTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: LSLEKPSRWSPRIEVSVQGAEKG*YPVVVA
Trigger: AGCCACGACAACTGGATACCAACCTTTTTCAGCACC...CTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000525044.5
ENST00000528946.5
ENST00000530084.5
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp CCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTAGCACGAACTTCCTCTaGGTTGTAGTTCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: PPVGHLELRYLSRLTVELSTNFL*VVVPRA
Trigger: GGCCCTTGGAACTACAACCCAGAGGAAGTTCGTGCT...AAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR CCA 90 bp CCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTAGGGTAAAAGCCAGCTaGGTCTCAGGGAGAGCTAAG +
Preference number: 4 (lower is better)
Translates to: PPVGHLELRYLSRLTVELRVKAS*VSGRAK
Trigger: CTTAGCTCTCCCTGAGACCCAGCTGGCTTTTACCCT...AAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR CCA 90 bp GTGCCTGTAGAGTGCAACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTACAATTTGTCTTGATTaGGTGCTGTGGCCTGCATTC +
Preference number: 4 (lower is better)
Translates to: VPVECNCSLKDRVQGMWSTICLD*VLWPAF
Trigger: GAATGCAGGCCACAGCACCCAATCAAGACAAATTGT...AGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGTTGCACTCTACAGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp GAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCTCTTCAACAGGGAACTaGCCTGAACAGCTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: ELSLEKPSRWSPRIEVSVSSTGN*PEQLKC
Trigger: ACACTTGAGCTGTTCAGGCCAGTTCCCTGTTGAAGA...GACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp GAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCTCAAGGTTATGCTTTTaGGAAGCCAACCCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: ELSLEKPSRWSPRIEVSVSRLCF*EANPPF
Trigger: GAAGGGAGGGTTGGCTTCCCAAAAGCATAACCTTGA...GACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp GCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTGTCCTGGTGCCTATTGTTTaGTTTGGTCAAGGTTATGCT +
Preference number: 4 (lower is better)
Translates to: ALSKTVCRECGLQSGSSVLVPIV*FGQGYA
Trigger: AGCATAACCTTGACCAAACCAAACAATAGGCACCAG...GACACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp TACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAAATCTTTTCTGGCCAGCAGTAGATaGGCTGCCTGCAGGCGATCC +
Preference number: 4 (lower is better)
Translates to: YHGNSPIITTNVDRFKSFLASSR*AACRRS
Trigger: GGATCGCCTGCAGGCAGCCCATCTACTGCTGGCCAG...AAAAGATTTAAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361921.8
ENST00000613679.4
CDS-3UTR TCA 90 bp AGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCCAGGATGTTCCGCTTaGCTCTGTCTGGAAACAATA +
Preference number: 4 (lower is better)
Translates to: SPPVGHLELRYLSRLTVEPGCSA*LCLETI
Trigger: TATTGTTTCCAGACAGAGTCAAGCGGAACATCCTGG...CTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR TCA 90 bp AGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTCCAGGATGTTCCGCTTaGCTCTGTCTGGAAACAATA +
Preference number: 4 (lower is better)
Translates to: SLEKPSRWSPRIEVSVQIPGCSA*LCLETI
Trigger: TATTGTTTCCAGACAGAGTCAAGCGGAACATCCTGG...AATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR TCA 90 bp GCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAGGGCCAGATTTACCCTaGTGCATGTGCTTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: ALRSPPVGHLELRYLSRLGPDLP*CMCFFN
Trigger: ATTGAAGAAGCACATGCATCAGGGTAAATCTGGCCC...TAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000528946.5
ENST00000617230.2
CDS-3UTR TCA 90 bp ATAACATTTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCAGGGAGAGCTAAGCCTTaGGAAGCCCTCCCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: ITFSFESSHSRVYFRLWPGRAKP*EALPLV
Trigger: GACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCC...TGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAAATGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp GTGCCTGTAGAGTGCAACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTGAAGGAATGCCAGCTTaGATTACTTGGTATCAGAGT +
Preference number: 4 (lower is better)
Translates to: VPVECNCSLKDRVQGMWSEGMPA*ITWYQS
Trigger: ACTCTGATACCAAGTAATTCAAGCTGGCATTCCTTC...AGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGTTGCACTCTACAGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp CGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCCATTACCCACGACCACATaGACAGCCACCTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: RWSPRIEVSVQINCGAFPLPTTT*TATSKS
Trigger: GCTCTTGGAGGTGGCTGTGCATGTGGTCGTGGGTAA...TGGAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR GCA 90 bp GCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTGTCAGTGGCCTATTACCTTaGATAAACTCCCAAATGTTG +
Preference number: 4 (lower is better)
Translates to: ALSKTVCRECGLQSGSSVSGLLP*INSQML
Trigger: CAACATTTGGGAGTTTATGCAAGGTAATAGGCCACT...GACACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp CTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTGTCAGGCAGCTGGGAGTTGTTTaGTTAGATCAGAAAAATCTG +
Preference number: 4 (lower is better)
Translates to: LSKTVCRECGLQSGSSVRQLGVV*LDQKNL
Trigger: CAGATTTTTCTGATCTAAGCAAACAACTCCCAGCTG...CCTGACACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp GTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCCAGTTGGGTGCTGTGGCCTaGATTCCTCAGCTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: VGHLELRYLSRLTVELFQLGAVA*IPQLGV
Trigger: AACTCCCAGCTGAGGAATGCAGGCCACAGCACCCAA...CTGGAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR GCA 90 bp CTGCAGGCGATCCTGAAGGTTCTGGTGATTTCTGATGTCCATGTTGTTCTTAAATGGCTGCTCTGGTTCTaGATGGTGTCCACCACCACA +
Preference number: 4 (lower is better)
Translates to: LQAILKVLVISDVHVVLKWLLWF*MVSTTT
Trigger: TGTGGTGGTGGACACCATGCAGAACCAGAGCAGCCA...TTTAAGAACAACATGGACATCAGAAATCACCAGAACCTTCAGGATCGCCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000530084.5
ENST00000610607.4
CDS-3UTR GCA 90 bp ATAACATTTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCACCTCTCAGGCAGTGCTaGGTAGAGCTGGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: ITFSFESSHSRVYFRLWPPLRQC*VELAAL
Trigger: CAGAGCAGCCAGCTCTACGCAGCACTGCCTGAGAGG...TGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAAATGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361921.8
ENST00000613679.4
CDS-3UTR GCA 90 bp CCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTCCTTGTAGAGGATCCTaGCCTCCTGGATTATGTAGA +
Preference number: 4 (lower is better)
Translates to: PSRWSPRIEVSVQINCGAPCRGS*PPGLCR
Trigger: TCTACATAATCCAGGAGGGCAGGATCCTCTACAAGG...AGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp AGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTGGTGCTGAAAAAGGTTaGTATCCAGTTGTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: SLEKPSRWSPRIEVSVQIGAEKG*YPVVVA
Trigger: AGCCACGACAACTGGATACCAACCTTTTTCAGCACC...AATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000528946.5
ENST00000530084.5
ENST00000617230.2
CDS-3UTR CCA 90 bp CCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCAGCACGAACTTCCTCTaGGTTGTAGTTCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: PVGHLELRYLSRLTVELFSTNFL*VVVPRA
Trigger: GGCCCTTGGAACTACAACCCAGAGGAAGTTCGTGCT...GAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR CCA 90 bp GAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGAGAAGCCCTCCCGTTaGTCACCTAGAATTGAGGTA +
Preference number: 4 (lower is better)
Translates to: EKPSRWSPRIEVSVQINCEKPSR*SPRIEV
Trigger: TACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTC...ACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR CCA 90 bp GGAACTGTTTCTTCAACAGGGAACTGGCCTGAACAGCTCAAGTGTTGCTTCATTAGGGTAAAAGCCAGCTaGGTCTCAGGGAGAGCTAAG +
Preference number: 4 (lower is better)
Translates to: GTVSSTGNWPEQLKCCFIRVKAS*VSGRAK
Trigger: CTTAGCTCTCCCTGAGACCCAGCTGGCTTTTACCCT...AATGAAGCAACACTTGAGCTGTTCAGGCCAGTTCCCTGTTGAAGAAACAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp CCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCAGGGTAAAAGCCAGCTaGGTCTCAGGGAGAGCTAAG +
Preference number: 4 (lower is better)
Translates to: PVGHLELRYLSRLTVELFRVKAS*VSGRAK
Trigger: CTTAGCTCTCCCTGAGACCCAGCTGGCTTTTACCCT...GAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR CCA 90 bp GTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCCAGCTTGATTGGGTGCTGTaGCCTGCATTCCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VGHLELRYLSRLTVELFQLDWVL*PAFLSW
Trigger: CCAGCTGAGGAATGCAGGCCACAGCACCCAATCAAG...CTGGAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR CCA 90 bp CCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTGGTATCAGAGTGGCTaGAGAGAGATACCGTACCTC +
Preference number: 4 (lower is better)
Translates to: PPVGHLELRYLSRLTVELWYQSG*REIPYL
Trigger: GAGGTACGGTATCTCTCTCCAGCCACTCTGATACCA...AAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR CCA 90 bp ACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTCTGGTGCCTATTGTTTaGTTTGGTCAAGGTTATGCT +
Preference number: 4 (lower is better)
Translates to: TALSKTVCRECGLQSGSSLVPIV*FGQGYA
Trigger: AGCATAACCTTGACCAAACCAAACAATAGGCACCAG...ACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp TCCTCAGCTGGGAGTTGTTTGCTTAGATCAGAAAAATCTGAGCTAGTGATTCAGTCCAGTTGTCGTGGCTaGAATGGGGGTTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SSAGSCLLRSEKSELVIQSSCRG*NGGSWS
Trigger: TGACCAGGAACCCCCATTTCAGCCACGACAACTGGA...CTGAATCACTAGCTCAGATTTTTCTGATCTAAGCAAACAACTCCCAGCTGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp CTAACACAAATGACCATTAAGAGACTTGCGAAGAAATCAGAGAAACAGAATTTCGTTGCACCTCTGTCCTaGGAGGCGGACCACCGGGCA +
Preference number: 4 (lower is better)
Translates to: LTQMTIKRLAKKSEKQNFVAPLS*EADHRA
Trigger: TGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCAAC...GAAATTCTGTTTCTCTGATTTCTTCGCAAGTCTCTTAATGGTCATTTGTGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp GGGATGTGTTACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTGGGCCAGATTTACCCTaGTGCATGTGCTTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: GMCYHGNSPIITTNVDRFGPDLP*CMCFFN
Trigger: ATTGAAGAAGCACATGCATCAGGGTAAATCTGGCCC...AAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGTAACACATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR TCA 90 bp GGAACTGTTTCTTCAACAGGGAACTGGCCTGAACAGCTCAAGTGTTGCTTCATTAACAGGGAACTGGCCTaGACAGCTCAAGTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: GTVSSTGNWPEQLKCCFINRELA*TAQVLL
Trigger: AAGCAACACTTGAGCTGTTCAGGCCAGTTCCCTGTT...AATGAAGCAACACTTGAGCTGTTCAGGCCAGTTCCCTGTTGAAGAAACAGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp GTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCCAGTTGGCAAGGAGAGGATaGCTGCCTCCTCCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: VGHLELRYLSRLTVELFQLARRG*LPPPVS
Trigger: AGAAACAGGAGGAGGCAGTCATCCTCTCCTTGCCAA...CTGGAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR TCA 90 bp AGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTTTCTGCATAACTGAATaGCAGCATTGCTGGTGCCTA +
Preference number: 4 (lower is better)
Translates to: SLEKPSRWSPRIEVSVQIFCITE*QHCWCL
Trigger: TAGGCACCAGCAATGCTGTCATTCAGTTATGCAGAA...AATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR TCA 90 bp CTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACGAGCTTCTGCATAACTaGATGACAGCATTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LEKPSRWSPRIEVSVQINELLHN*MTALLV
Trigger: CACCAGCAATGCTGTCATTCAGTTATGCAGAAGCTC...GTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR GCA 90 bp TCCTCAGCTGGGAGTTGTTTGCTTAGATCAGAAAAATCTGAGCTAGTGATTCAGTTACCCACGACCACATaGACAGCCACCTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: SSAGSCLLRSEKSELVIQLPTTT*TATSKS
Trigger: GCTCTTGGAGGTGGCTGTGCATGTGGTCGTGGGTAA...CTGAATCACTAGCTCAGATTTTTCTGATCTAAGCAAACAACTCCCAGCTGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp TCCTCAGCTGGGAGTTGTTTGCTTAGATCAGAAAAATCTGAGCTAGTGATTCAGTTGGGTGCTGTGGCCTaGATTCCTCAGCTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: SSAGSCLLRSEKSELVIQLGAVA*IPQLGV
Trigger: AACTCCCAGCTGAGGAATGCAGGCCACAGCACCCAA...CTGAATCACTAGCTCAGATTTTTCTGATCTAAGCAAACAACTCCCAGCTGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp CCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTTGTCTTGATTGGGTaGTGTGGCCTGCATTCCTCA +
Preference number: 4 (lower is better)
Translates to: PPVGHLELRYLSRLTVELFVLIG*CGLHSS
Trigger: TGAGGAATGCAGGCCACAGCACCCAATCAAGACAAA...AAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR GCA 90 bp TTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTCTCTCAAAGACCGTGTaGAGGGAATGTGGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: LRSPPVGHLELRYLSRLTLSKTV*RECGLQ
Trigger: TTGGAGACCACATTCCCTGCACACGGTCTTTGAGAG...AGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR GCA 90 bp TCCTCAGCTGGGAGTTGTTTGCTTAGATCAGAAAAATCTGAGCTAGTGATTCAGTGGCTGCTCTGGTTCTaGATGGTGTCCACCACCACA +
Preference number: 4 (lower is better)
Translates to: SSAGSCLLRSEKSELVIQWLLWF*MVSTTT
Trigger: TGTGGTGGTGGACACCATGCAGAACCAGAGCAGCCA...CTGAATCACTAGCTCAGATTTTTCTGATCTAAGCAAACAACTCCCAGCTGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361921.8
ENST00000613679.4
CDS-3UTR CCA 90 bp CTAACACAAATGACCATTAAGAGACTTGCGAAGAAATCAGAGAAACAGAATTTCCTTCAGCCACAGCCCTaGCTGGGGCAGCCCCATCTC +
Preference number: 4 (lower is better)
Translates to: LTQMTIKRLAKKSEKQNFLQPQP*LGQPHL
Trigger: GAGATGGGGCTGCCCCAGCCAGGGCTGTGGCTGAAG...GAAATTCTGTTTCTCTGATTTCTTCGCAAGTCTCTTAATGGTCATTTGTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp CCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTCCGCTTGACTCTGTCTaGAAACAATATCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: PSRWSPRIEVSVQINCGAPLDSV*KQYQKH
Trigger: GTGCTTCTGATATTGTTTCCAGACAGAGTCAAGCGG...AGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR CCA 90 bp GTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCCAGGGTATCCAGTTGTCGTaGCTGAAATGGGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: VGHLELRYLSRLTVELFQGIQLS*LKWGFL
Trigger: CAGGAACCCCCATTTCAGCCACGACAACTGGATACC...CTGGAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000528946.5
ENST00000530084.5
ENST00000617230.2
CDS-3UTR CCA 90 bp GAACTGTTTCTTCAACAGGGAACTGGCCTGAACAGCTCAAGTGTTGCTTCATTTAGCACGAACTTCCTCTaGGTTGTAGTTCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: ELFLQQGTGLNSSSVASFSTNFL*VVVPRA
Trigger: GGCCCTTGGAACTACAACCCAGAGGAAGTTCGTGCT...AAATGAAGCAACACTTGAGCTGTTCAGGCCAGTTCCCTGTTGAAGAAACAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp GGAACTGTTTCTTCAACAGGGAACTGGCCTGAACAGCTCAAGTGTTGCTTCATTGAGAAGCCCTCCCGTTaGTCACCTAGAATTGAGGTA +
Preference number: 4 (lower is better)
Translates to: GTVSSTGNWPEQLKCCFIEKPSR*SPRIEV
Trigger: TACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTC...AATGAAGCAACACTTGAGCTGTTCAGGCCAGTTCCCTGTTGAAGAAACAGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp CCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTAGAAATACTGGGTGCTaGAAAAGGTTGGTATCCAGT +
Preference number: 4 (lower is better)
Translates to: PSRWSPRIEVSVQINCGARNTGC*KRLVSS
Trigger: ACTGGATACCAACCTTTTTCAGCACCCAGTATTTCT...AGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000528946.5
ENST00000530084.5
ENST00000617230.2
CDS-3UTR TCA 90 bp TTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGGGCCAGATTTACCCTaGTGCATGTGCTTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: LRSPPVGHLELRYLSRLTGPDLP*CMCFFN
Trigger: ATTGAAGAAGCACATGCATCAGGGTAAATCTGGCCC...AGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000528946.5
ENST00000617230.2
CDS-3UTR TCA 90 bp GAACTGTTTCTTCAACAGGGAACTGGCCTGAACAGCTCAAGTGTTGCTTCATTTAACAGGGAACTGGCCTaGACAGCTCAAGTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: ELFLQQGTGLNSSSVASFNRELA*TAQVLL
Trigger: AAGCAACACTTGAGCTGTTCAGGCCAGTTCCCTGTT...AAATGAAGCAACACTTGAGCTGTTCAGGCCAGTTCCCTGTTGAAGAAACAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp ATAACATTTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCAGTGTCCTCTAGTCGCTaGCAACGGACCTTCAAGACG +
Preference number: 4 (lower is better)
Translates to: ITFSFESSHSRVYFRLWPVSSSR*QRTFKT
Trigger: CGTCTTGAAGGTCCGTTGGCAGCGACTAGAGGACAC...TGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAAATGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp ATAACATTTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCACTGCGTAGAGCTGGCTaGTCTGGTTCTGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: ITFSFESSHSRVYFRLWPLRRAG*SGSAWC
Trigger: ACACCATGCAGAACCAGAGCAGCCAGCTCTACGCAG...TGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAAATGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361921.8
ENST00000613679.4
CDS-3UTR CCA 90 bp ACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAAATCTTTTGTTGTCGTGGCTGAAATaGGGGTTCCTGGTCATACCC +
Preference number: 4 (lower is better)
Translates to: TMETHPSSPPMWTGLNLLLSWLK*GFLVIP
Trigger: GGGTATGACCAGGAACCCCCATTTCAGCCACGACAA...CAAAAGATTTAAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp GAACTGTTTCTTCAACAGGGAACTGGCCTGAACAGCTCAAGTGTTGCTTCATTTATGTGGTCTCCAAAGTaGGAGCAGTGTCAGGCTCTA +
Preference number: 4 (lower is better)
Translates to: ELFLQQGTGLNSSSVASFMWSPK*EQCQAL
Trigger: TAGAGCCTGACACTGCTCCCACTTTGGAGACCACAT...AAATGAAGCAACACTTGAGCTGTTCAGGCCAGTTCCCTGTTGAAGAAACAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp ACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTTCTCTTCCTAACAACTaGAATTCTTCCCATAATTGG +
Preference number: 4 (lower is better)
Translates to: TALSKTVCRECGLQSGSSSLPNN*NSSHNW
Trigger: CCAATTATGGGAAGAATTCCAGTTGTTAGGAAGAGA...ACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp GTGCCTGTAGAGTGCAACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTTCTCTTCCTAACAACTaGAATTCTTCCCATAATTGG +
Preference number: 4 (lower is better)
Translates to: VPVECNCSLKDRVQGMWSSLPNN*NSSHNW
Trigger: CCAATTATGGGAAGAATTCCAGTTGTTAGGAAGAGA...AGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGTTGCACTCTACAGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp GTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCCAGCCAGGATGTTCCGCTTaGCTCTGTCTGGAAACAATA +
Preference number: 4 (lower is better)
Translates to: VGHLELRYLSRLTVELFQPGCSA*LCLETI
Trigger: TATTGTTTCCAGACAGAGTCAAGCGGAACATCCTGG...CTGGAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR TCA 90 bp GAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTAGAAATACTGGGTGCTaGAAAAGGTTGGTATCCAGT +
Preference number: 4 (lower is better)
Translates to: EKPSRWSPRIEVSVQINCRNTGC*KRLVSS
Trigger: ACTGGATACCAACCTTTTTCAGCACCCAGTATTTCT...ACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000528946.5
ENST00000530084.5
ENST00000617230.2
CDS-3UTR TCA 90 bp CTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACAGAAATACTGGGTGCTaGAAAAGGTTGGTATCCAGT +
Preference number: 4 (lower is better)
Translates to: LEKPSRWSPRIEVSVQINRNTGC*KRLVSS
Trigger: ACTGGATACCAACCTTTTTCAGCACCCAGTATTTCT...GTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000528946.5
ENST00000530084.5
ENST00000617230.2
CDS-3UTR TCA 90 bp CTAACACAAATGACCATTAAGAGACTTGCGAAGAAATCAGAGAAACAGAATTTCGGGAGAGCTAAGCCTTaGGAAGCCCTCCCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: LTQMTIKRLAKKSEKQNFGRAKP*EALPLV
Trigger: GACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCC...GAAATTCTGTTTCTCTGATTTCTTCGCAAGTCTCTTAATGGTCATTTGTGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp TCTGAGCTAGTGATTCAGCTAGGGACACAGGTCAAGGGTAAAAGCCAGCTGGGTGGCTATCCATCAGTTTaGTGTAATCTAACACAAATG +
Preference number: 4 (lower is better)
Translates to: SELVIQLGTQVKGKSQLGGYPSV*CNLTQM
Trigger: CATTTGTGTTAGATTACATCAAACTGATGGATAGCC...ACCCAGCTGGCTTTTACCCTTGACCTGTGTCCCTAGCTGAATCACTAGCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp AGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTCAGCTGGGAGTTGTTTaGTTAGATCAGAAAAATCTG +
Preference number: 4 (lower is better)
Translates to: SLEKPSRWSPRIEVSVQIQLGVV*LDQKNL
Trigger: CAGATTTTTCTGATCTAAGCAAACAACTCCCAGCTG...AATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR CCA 90 bp TACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAAATCTTTTAGCACGAACTTCCTCTaGGTTGTAGTTCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: YHGNSPIITTNVDRFKSFSTNFL*VVVPRA
Trigger: GGCCCTTGGAACTACAACCCAGAGGAAGTTCGTGCT...AAAAGATTTAAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp ATAACATTTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCAAGGGTAAAAGCCAGCTaGGTCTCAGGGAGAGCTAAG +
Preference number: 4 (lower is better)
Translates to: ITFSFESSHSRVYFRLWPRVKAS*VSGRAK
Trigger: CTTAGCTCTCCCTGAGACCCAGCTGGCTTTTACCCT...TGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAAATGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp TCCTCAGCTGGGAGTTGTTTGCTTAGATCAGAAAAATCTGAGCTAGTGATTCAGTGGTATCAGAGTGGCTaGAGAGAGATACCGTACCTC +
Preference number: 4 (lower is better)
Translates to: SSAGSCLLRSEKSELVIQWYQSG*REIPYL
Trigger: GAGGTACGGTATCTCTCTCCAGCCACTCTGATACCA...CTGAATCACTAGCTCAGATTTTTCTGATCTAAGCAAACAACTCCCAGCTGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp CTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACAAAATTCAGCACCAGTaGCCTATTACCTTCAAGACG +
Preference number: 4 (lower is better)
Translates to: LEKPSRWSPRIEVSVQINKIQHQ*PITFKT
Trigger: CGTCTTGAAGGTAATAGGCCACTGGTGCTGAATTTT...GTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525044.5
ENST00000530084.5
3UTR CAA 72 bp TGGTGCCTATTGTTTGGTTTGGTCAAGGTTATGCTTTaGGGAAGCCAACCCTCCCTTCTAGATGACTCTGTT +
Preference number: 4 (lower is better)
Translates to: WCLLFGLVKVML*GSQPSLLDDSV
Trigger: AACAGAGTCATCTAGAAGGGAGGGTTGGCTTCCCAAAAGCATAACCTTGACCAAACCAAACAATAGGCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp GGAACTGTTTCTTCAACAGGGAACTGGCCTGAACAGCTCAAGTGTTGCTTCATTAGAAATACTGGGTGCTaGAAAAGGTTGGTATCCAGT +
Preference number: 4 (lower is better)
Translates to: GTVSSTGNWPEQLKCCFIRNTGC*KRLVSS
Trigger: ACTGGATACCAACCTTTTTCAGCACCCAGTATTTCT...AATGAAGCAACACTTGAGCTGTTCAGGCCAGTTCCCTGTTGAAGAAACAGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp AGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGGGCTATCCATCAGTTTaGTGTAATCTAACACAAATG +
Preference number: 4 (lower is better)
Translates to: SPPVGHLELRYLSRLTVEGYPSV*CNLTQM
Trigger: CATTTGTGTTAGATTACATCAAACTGATGGATAGCC...CTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR GCA 90 bp CCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTAGTGGCCTATTACCTTaGATAAACTCCCAAATGTTG +
Preference number: 4 (lower is better)
Translates to: PPVGHLELRYLSRLTVELSGLLP*INSQML
Trigger: CAACATTTGGGAGTTTATGCAAGGTAATAGGCCACT...AAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000527060.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR GCA 90 bp GGGATGTGTTACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTCAGCTGGGAGTTGTTTaGTTAGATCAGAAAAATCTG +
Preference number: 4 (lower is better)
Translates to: GMCYHGNSPIITTNVDRFQLGVV*LDQKNL
Trigger: CAGATTTTTCTGATCTAAGCAAACAACTCCCAGCTG...AAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGTAACACATCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp TCCTCAGCTGGGAGTTGTTTGCTTAGATCAGAAAAATCTGAGCTAGTGATTCAGTTTGTCTTGATTGGGTaGTGTGGCCTGCATTCCTCA +
Preference number: 4 (lower is better)
Translates to: SSAGSCLLRSEKSELVIQFVLIG*CGLHSS
Trigger: TGAGGAATGCAGGCCACAGCACCCAATCAAGACAAA...CTGAATCACTAGCTCAGATTTTTCTGATCTAAGCAAACAACTCCCAGCTGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp TGTTTGCTTAGATCAGAAAAATCTGAGCTAGTGATTCAGCTAGGGACACAGGTCAGTGTGCCTGTAGAGTaGAACTGCTCTCTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: CLLRSEKSELVIQLGTQVSVPVE*NCSLKD
Trigger: GTCTTTGAGAGAGCAGTTGCACTCTACAGGCACACT...GACCTGTGTCCCTAGCTGAATCACTAGCTCAGATTTTTCTGATCTAAGCAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp GTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCCAGGTTTGGTCAAGGTTATaGTTTTGGGAAGCCAACCCT +
Preference number: 4 (lower is better)
Translates to: VGHLELRYLSRLTVELFQVWSRL*FWEANP
Trigger: AGGGTTGGCTTCCCAAAAGCATAACCTTGACCAAAC...CTGGAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR CCA 90 bp TTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCATCATAAAGAGAAGCCCTCCCGTTaGTCACCTAGAATTGAGGTA +
Preference number: 4 (lower is better)
Translates to: FLLNQVTAVCTLGCGHHKEKPSR*SPRIEV
Trigger: TACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTC...TTTATGATGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp TCTTCAATAAGCCTCTTGAACTGGTCAAATTTGAACATAAATGAAGGTCAGGTATCCAGTTGTCGTGGCTaGAATGGGGGTTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SSISLLNWSNLNINEGQVSSCRG*NGGSWS
Trigger: TGACCAGGAACCCCCATTTCAGCCACGACAACTGGA...TACCTGACCTTCATTTATGTTCAAATTTGACCAGTTCAAGAGGCTTATTGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525044.5
ENST00000530084.5
CDS-3UTR TCA 90 bp GAACTGTTTCTTCAACAGGGAACTGGCCTGAACAGCTCAAGTGTTGCTTCATTTAGAAATACTGGGTGCTaGAAAAGGTTGGTATCCAGT +
Preference number: 4 (lower is better)
Translates to: ELFLQQGTGLNSSSVASFRNTGC*KRLVSS
Trigger: ACTGGATACCAACCTTTTTCAGCACCCAGTATTTCT...AAATGAAGCAACACTTGAGCTGTTCAGGCCAGTTCCCTGTTGAAGAAACAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp CGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCCAGAAGGAATGCCAGCTTaGATTACTTGGTATCAGAGT +
Preference number: 4 (lower is better)
Translates to: RWSPRIEVSVQINCGAFPEGMPA*ITWYQS
Trigger: ACTCTGATACCAAGTAATTCAAGCTGGCATTCCTTC...TGGAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR GCA 90 bp GGAACTGTTTCTTCAACAGGGAACTGGCCTGAACAGCTCAAGTGTTGCTTCATTAGTGGCCTATTACCTTaGATAAACTCCCAAATGTTG +
Preference number: 4 (lower is better)
Translates to: GTVSSTGNWPEQLKCCFISGLLP*INSQML
Trigger: CAACATTTGGGAGTTTATGCAAGGTAATAGGCCACT...AATGAAGCAACACTTGAGCTGTTCAGGCCAGTTCCCTGTTGAAGAAACAGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp ATAACATTTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCAAGTGTGCCTGTAGAGTaGAACTGCTCTCTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: ITFSFESSHSRVYFRLWPSVPVE*NCSLKD
Trigger: GTCTTTGAGAGAGCAGTTGCACTCTACAGGCACACT...TGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAAATGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp TTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCATCATAAAAGTGTGCCTGTAGAGTaGAACTGCTCTCTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: FLLNQVTAVCTLGCGHHKSVPVE*NCSLKD
Trigger: GTCTTTGAGAGAGCAGTTGCACTCTACAGGCACACT...TTTATGATGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp ACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAAATCTTTTGCCGCTTGACTCTGTCTaGAAACAATATCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: TMETHPSSPPMWTGLNLLPLDSV*KQYQKH
Trigger: GTGCTTCTGATATTGTTTCCAGACAGAGTCAAGCGG...CAAAAGATTTAAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp ATAACATTTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCAGGTGCTGAAAAAGGTTaGTATCCAGTTGTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: ITFSFESSHSRVYFRLWPGAEKG*YPVVVA
Trigger: AGCCACGACAACTGGATACCAACCTTTTTCAGCACC...TGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAAATGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp ACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAAATCTTTTGACAATTTGTCTTGATTaGGTGCTGTGGCCTGCATTC +
Preference number: 4 (lower is better)
Translates to: TMETHPSSPPMWTGLNLLTICLD*VLWPAF
Trigger: GAATGCAGGCCACAGCACCCAATCAAGACAAATTGT...CAAAAGATTTAAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp TACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAAATCTTTTTCTTCAACAGGGAACTaGCCTGAACAGCTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: YHGNSPIITTNVDRFKSFSSTGN*PEQLKC
Trigger: ACACTTGAGCTGTTCAGGCCAGTTCCCTGTTGAAGA...AAAAGATTTAAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp TACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAAATCTTTTTCAAGGTTATGCTTTTaGGAAGCCAACCCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: YHGNSPIITTNVDRFKSFSRLCF*EANPPF
Trigger: GAAGGGAGGGTTGGCTTCCCAAAAGCATAACCTTGA...AAAAGATTTAAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp TTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCATCATAAATCAAGGTTATGCTTTTaGGAAGCCAACCCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: FLLNQVTAVCTLGCGHHKSRLCF*EANPPF
Trigger: GAAGGGAGGGTTGGCTTCCCAAAAGCATAACCTTGA...TTTATGATGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp CCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTATAGATGAATACCAATaGCTATCCATCAGTTTGATG +
Preference number: 4 (lower is better)
Translates to: PSRWSPRIEVSVQINCGAIDEYQ*LSISLM
Trigger: CATCAAACTGATGGATAGCCATTGGTATTCATCTAT...AGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR CCA 90 bp CTGCAGGCGATCCTGAAGGTTCTGGTGATTTCTGATGTCCATGTTGTTCTTAAAAAAATTCAGCACCAGTaGCCTATTACCTTCAAGACG +
Preference number: 4 (lower is better)
Translates to: LQAILKVLVISDVHVVLKKIQHQ*PITFKT
Trigger: CGTCTTGAAGGTAATAGGCCACTGGTGCTGAATTTT...TTTAAGAACAACATGGACATCAGAAATCACCAGAACCTTCAGGATCGCCTGCAG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000530084.5
CDS-3UTR TCA 90 bp TACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAAATCTTTTTTCTGCATAACTGAATaGCAGCATTGCTGGTGCCTA +
Preference number: 4 (lower is better)
Translates to: YHGNSPIITTNVDRFKSFFCITE*QHCWCL
Trigger: TAGGCACCAGCAATGCTGTCATTCAGTTATGCAGAA...AAAAGATTTAAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGTA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp TACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAAATCTTTTGTTTGGTCAAGGTTATaGTTTTGGGAAGCCAACCCT +
Preference number: 4 (lower is better)
Translates to: YHGNSPIITTNVDRFKSFVWSRL*FWEANP
Trigger: AGGGTTGGCTTCCCAAAAGCATAACCTTGACCAAAC...AAAAGATTTAAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp ATAACATTTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCACCGCTTGACTCTGTCTaGAAACAATATCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: ITFSFESSHSRVYFRLWPPLDSV*KQYQKH
Trigger: GTGCTTCTGATATTGTTTCCAGACAGAGTCAAGCGG...TGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAAATGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp CTAACACAAATGACCATTAAGAGACTTGCGAAGAAATCAGAGAAACAGAATTTCAGCACGAACTTCCTCTaGGTTGTAGTTCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: LTQMTIKRLAKKSEKQNFSTNFL*VVVPRA
Trigger: GGCCCTTGGAACTACAACCCAGAGGAAGTTCGTGCT...GAAATTCTGTTTCTCTGATTTCTTCGCAAGTCTCTTAATGGTCATTTGTGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp TTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCATCATAAAGAAGGAATGCCAGCTTaGATTACTTGGTATCAGAGT +
Preference number: 4 (lower is better)
Translates to: FLLNQVTAVCTLGCGHHKEGMPA*ITWYQS
Trigger: ACTCTGATACCAAGTAATTCAAGCTGGCATTCCTTC...TTTATGATGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp TCCTCAGCTGGGAGTTGTTTGCTTAGATCAGAAAAATCTGAGCTAGTGATTCAGAGTGGCCTATTACCTTaGATAAACTCCCAAATGTTG +
Preference number: 4 (lower is better)
Translates to: SSAGSCLLRSEKSELVIQSGLLP*INSQML
Trigger: CAACATTTGGGAGTTTATGCAAGGTAATAGGCCACT...CTGAATCACTAGCTCAGATTTTTCTGATCTAAGCAAACAACTCCCAGCTGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp TTTCTGATGTCCATGTTGTTCTTAAAAGCCCAGCCATCTGATGCATGTGCTTCTAGTGGCCTATTACCTTaGATAAACTCCCAAATGTTG +
Preference number: 4 (lower is better)
Translates to: FLMSMLFLKAQPSDACASSGLLP*INSQML
Trigger: CAACATTTGGGAGTTTATGCAAGGTAATAGGCCACT...AGAAGCACATGCATCAGATGGCTGGGCTTTTAAGAACAACATGGACATCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527060.5
ENST00000610607.4
CDS-3UTR CCA 90 bp CTAACACAAATGACCATTAAGAGACTTGCGAAGAAATCAGAGAAACAGAATTTCGAGAAGCCCTCCCGTTaGTCACCTAGAATTGAGGTA +
Preference number: 4 (lower is better)
Translates to: LTQMTIKRLAKKSEKQNFEKPSR*SPRIEV
Trigger: TACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTC...GAAATTCTGTTTCTCTGATTTCTTCGCAAGTCTCTTAATGGTCATTTGTGTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp TCAATAAGCCTCTTGAACTGGTCAAATTTGAACATAAATGAAGGTCAGGTACAAGAGAAGCCCTCCCGTTaGTCACCTAGAATTGAGGTA +
Preference number: 4 (lower is better)
Translates to: SISLLNWSNLNINEGQVQEKPSR*SPRIEV
Trigger: TACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTC...TTGTACCTGACCTTCATTTATGTTCAAATTTGACCAGTTCAAGAGGCTTATTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525044.5
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp CTAACACAAATGACCATTAAGAGACTTGCGAAGAAATCAGAGAAACAGAATTTCATGTGGTCTCCAAAGTaGGAGCAGTGTCAGGCTCTA +
Preference number: 4 (lower is better)
Translates to: LTQMTIKRLAKKSEKQNFMWSPK*EQCQAL
Trigger: TAGAGCCTGACACTGCTCCCACTTTGGAGACCACAT...GAAATTCTGTTTCTCTGATTTCTTCGCAAGTCTCTTAATGGTCATTTGTGTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp TTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCATCATAAACTGGTGCCTATTGTTTaGTTTGGTCAAGGTTATGCT +
Preference number: 4 (lower is better)
Translates to: FLLNQVTAVCTLGCGHHKLVPIV*FGQGYA
Trigger: AGCATAACCTTGACCAAACCAAACAATAGGCACCAG...TTTATGATGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp CTAACACAAATGACCATTAAGAGACTTGCGAAGAAATCAGAGAAACAGAATTTCGAGCTTCTGCATAACTaGATGACAGCATTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LTQMTIKRLAKKSEKQNFELLHN*MTALLV
Trigger: CACCAGCAATGCTGTCATTCAGTTATGCAGAAGCTC...GAAATTCTGTTTCTCTGATTTCTTCGCAAGTCTCTTAATGGTCATTTGTGTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp ATAACATTTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCACAGCTGGGAGTTGTTTaGTTAGATCAGAAAAATCTG +
Preference number: 4 (lower is better)
Translates to: ITFSFESSHSRVYFRLWPQLGVV*LDQKNL
Trigger: CAGATTTTTCTGATCTAAGCAAACAACTCCCAGCTG...TGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAAATGTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp CTAACACAAATGACCATTAAGAGACTTGCGAAGAAATCAGAGAAACAGAATTTCAGTGTGCCTGTAGAGTaGAACTGCTCTCTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: LTQMTIKRLAKKSEKQNFSVPVE*NCSLKD
Trigger: GTCTTTGAGAGAGCAGTTGCACTCTACAGGCACACT...GAAATTCTGTTTCTCTGATTTCTTCGCAAGTCTCTTAATGGTCATTTGTGTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp CTAACACAAATGACCATTAAGAGACTTGCGAAGAAATCAGAGAAACAGAATTTCTCAAAGATGGTAAAGTaGGTACTCTCCTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: LTQMTIKRLAKKSEKQNFSKMVK*VLSSSL
Trigger: CAGGGAAGAGGAGAGTACTCACTTTACCATCTTTGA...GAAATTCTGTTTCTCTGATTTCTTCGCAAGTCTCTTAATGGTCATTTGTGTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR TCA 90 bp TACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAAATCTTTTGGCTATCCATCAGTTTaGTGTAATCTAACACAAATG +
Preference number: 4 (lower is better)
Translates to: YHGNSPIITTNVDRFKSFGYPSV*CNLTQM
Trigger: CATTTGTGTTAGATTACATCAAACTGATGGATAGCC...AAAAGATTTAAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp ATAAGCCTCTTGAACTGGTCAAATTTGAACATAAATGAAGGTCAGGTACAACTTCCGCTTGACTCTGTCTaGAAACAATATCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: ISLLNWSNLNINEGQVQLPLDSV*KQYQKH
Trigger: GTGCTTCTGATATTGTTTCCAGACAGAGTCAAGCGG...AAGTTGTACCTGACCTTCATTTATGTTCAAATTTGACCAGTTCAAGAGGCTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525044.5
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CCA 90 bp TACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAAATCTTTTTCTCTTCCTAACAACTaGAATTCTTCCCATAATTGG +
Preference number: 4 (lower is better)
Translates to: YHGNSPIITTNVDRFKSFSLPNN*NSSHNW
Trigger: CCAATTATGGGAAGAATTCCAGTTGTTAGGAAGAGA...AAAAGATTTAAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp TCCTCAGCTGGGAGTTGTTTGCTTAGATCAGAAAAATCTGAGCTAGTGATTCAGATAGATGAATACCAATaGCTATCCATCAGTTTGATG +
Preference number: 4 (lower is better)
Translates to: SSAGSCLLRSEKSELVIQIDEYQ*LSISLM
Trigger: CATCAAACTGATGGATAGCCATTGGTATTCATCTAT...CTGAATCACTAGCTCAGATTTTTCTGATCTAAGCAAACAACTCCCAGCTGAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp ATAACATTTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCAATAGATGAATACCAATaGCTATCCATCAGTTTGATG +
Preference number: 4 (lower is better)
Translates to: ITFSFESSHSRVYFRLWPIDEYQ*LSISLM
Trigger: CATCAAACTGATGGATAGCCATTGGTATTCATCTAT...TGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAAATGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR GCA 90 bp CTCTTGAACTGGTCAAATTTGAACATAAATGAAGGTCAGGTACAACTTCCAAAAAGTGGCCTATTACCTTaGATAAACTCCCAAATGTTG +
Preference number: 4 (lower is better)
Translates to: LLNWSNLNINEGQVQLPKSGLLP*INSQML
Trigger: CAACATTTGGGAGTTTATGCAAGGTAATAGGCCACT...TTTTGGAAGTTGTACCTGACCTTCATTTATGTTCAAATTTGACCAGTTCAAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527060.5
ENST00000610607.4
CDS-3UTR CCA 90 bp CTAACACAAATGACCATTAAGAGACTTGCGAAGAAATCAGAGAAACAGAATTTCTCTCTTCCTAACAACTaGAATTCTTCCCATAATTGG +
Preference number: 4 (lower is better)
Translates to: LTQMTIKRLAKKSEKQNFSLPNN*NSSHNW
Trigger: CCAATTATGGGAAGAATTCCAGTTGTTAGGAAGAGA...GAAATTCTGTTTCTCTGATTTCTTCGCAAGTCTCTTAATGGTCATTTGTGTTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CCA 90 bp CTAACACAAATGACCATTAAGAGACTTGCGAAGAAATCAGAGAAACAGAATTTCATAGATGAATACCAATaGCTATCCATCAGTTTGATG +
Preference number: 4 (lower is better)
Translates to: LTQMTIKRLAKKSEKQNFIDEYQ*LSISLM
Trigger: CATCAAACTGATGGATAGCCATTGGTATTCATCTAT...GAAATTCTGTTTCTCTGATTTCTTCGCAAGTCTCTTAATGGTCATTTGTGTTAG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp ATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCCAGCAGTAGATGGGCTGGACCACCGGGCAGTTaGGGGCCAGACCCCCTAGCT +
Preference number: 5 (lower is better)
Translates to: MVSTTTGHWGLLASSRWAGPPGS*GPDPLA
Trigger: AGCTAGGGGGTCTGGCCCCAAACTGCCCGGTGGTCC...AGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000527060.5
ENST00000529329.1
CDS-3UTR CAA 90 bp AGAGGATCCTGCCCTCCTGGATTATGTAGAGCCTCTCAGGCAGTGCTGCGTAGAGGACCACCGGGCAGTTaGGGGCCAGACCCCCTAGCG +
Preference number: 5 (lower is better)
Translates to: RGSCPPGLCRASQAVLRRGPPGS*GPDPLA
Trigger: CGCTAGGGGGTCTGGCCCCAAACTGCCCGGTGGTCC...TCTACGCAGCACTGCCTGAGAGGCTCTACATAATCCAGGAGGGCAGGATCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610607.4
CDS-3UTR CAA 90 bp TCTGAGCTAGTGATTCAGCTAGGGACACAGGTCAAGGGTAAAAGCCAGCTGGGTGGACCACCGGGCAGTTaGGGGCCAGACCCCCTAGCT +
Preference number: 5 (lower is better)
Translates to: SELVIQLGTQVKGKSQLGGPPGS*GPDPLA
Trigger: AGCTAGGGGGTCTGGCCCCAAACTGCCCGGTGGTCC...ACCCAGCTGGCTTTTACCCTTGACCTGTGTCCCTAGCTGAATCACTAGCTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp GAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCGGACCACCGGGCAGTTaGGGGCCAGACCCCCTAGCT +
Preference number: 5 (lower is better)
Translates to: ELSLEKPSRWSPRIEVSVGPPGS*GPDPLA
Trigger: AGCTAGGGGGTCTGGCCCCAAACTGCCCGGTGGTCC...GACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000527060.5
ENST00000528946.5
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp CTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGGGACCACCGGGCAGTTaGGGGCCAGACCCCCTAGCT +
Preference number: 5 (lower is better)
Translates to: LSLEKPSRWSPRIEVSVQGPPGS*GPDPLA
Trigger: AGCTAGGGGGTCTGGCCCCAAACTGCCCGGTGGTCC...CTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000527060.5
ENST00000528946.5
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp TGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCCAGCAGTAGATGGGCTGATAAACTCCCAAATGTaGCACCTCTGTCCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: WCPPPQGTGGSWPAVDGLINSQM*HLCPER
Trigger: CCTCTCAGGACAGAGGTGCAACATTTGGGAGTTTAT...CAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000610607.4
CDS-3UTR CAA 90 bp CCACCACAGGGCACTGGGGGCTCCTGGCCAGCAGTAGATGGGCTGCCTGCAGGCCAGTGGCCTATTACCTaGCATAAACTCCCAAATGTT +
Preference number: 5 (lower is better)
Translates to: PPQGTGGSWPAVDGLPAGQWPIT*HKLPNV
Trigger: AACATTTGGGAGTTTATGCAAGGTAATAGGCCACTG...GCCTGCAGGCAGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527060.5
ENST00000610607.4
CDS GCA 90 bp CAGTTTGGGGCCAGACCCCCTAGCTCAGTCGTGTCCTCTAGTCGCTaGCAACGGACCTTCAAGACGAACCAGAAATACTGGGTGCCACGA +
Preference number: 5 (lower is better)
Translates to: QFGARPPSSVVSSSR*QRTFKTNQKYWVPR
Trigger: TCGTGGCACCCAGTATTTCTGGTTCGTCTTGAAGGTCCGTTGGCAGCGACTAGAGGACACGACTGAGCTAGGGGGTCTGGCCCCAAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524406.5
CDS-3UTR CAA 90 bp CCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAAGGTTGGTATCCAGTaGTCGTGGCTGAAATGGGGG +
Preference number: 5 (lower is better)
Translates to: PAGSQGELSLEKPSRWSPKVGIQ*SWLKWG
Trigger: CCCCCATTTCAGCCACGACAACTGGATACCAACCTT...AGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000525044.5
ENST00000528946.5
ENST00000530084.5
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp AGTTCCAAGGGCCAGATTTACCCTTGTAGAGGATCCTGCCCTCCTGGATTATGTGGACCACCGGGCAGTTaGGGGCCAGACCCCCTAGCT +
Preference number: 5 (lower is better)
Translates to: SSKGQIYPCRGSCPPGLCGPPGS*GPDPLA
Trigger: AGCTAGGGGGTCTGGCCCCAAACTGCCCGGTGGTCC...ACATAATCCAGGAGGGCAGGATCCTCTACAAGGGTAAATCTGGCCCTTGGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527060.5
ENST00000529329.1
CDS-3UTR CAA 90 bp ATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCCAGCAGTAGATGGGCTATAAACTCCCAAATGTaGCACCTCTGTCCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: MVSTTTGHWGLLASSRWAINSQM*HLCPER
Trigger: CCTCTCAGGACAGAGGTGCAACATTTGGGAGTTTAT...AGCCCATCTACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000610607.4
CDS-3UTR CAA 90 bp CTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACGGACCACCGGGCAGTTaGGGGCCAGACCCCCTAGCT +
Preference number: 5 (lower is better)
Translates to: LEKPSRWSPRIEVSVQINGPPGS*GPDPLA
Trigger: AGCTAGGGGGTCTGGCCCCAAACTGCCCGGTGGTCC...GTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000527060.5
ENST00000528946.5
ENST00000617230.2
CDS-3UTR CAA 90 bp GCTGGCTGCTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCGTTGGTCACCTAGAATaGAGGTATCTGTCCAGATTA +
Preference number: 5 (lower is better)
Translates to: AGCSGSAWCPPPQGTGGSVGHLE*RYLSRL
Trigger: TAATCTGGACAGATACCTCAATTCTAGGTGACCAAC...GGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCAGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CAA 90 bp GCTGCTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCGTTGGTCACCTAGAATaGAGGTATCTGTCCAGATTA +
Preference number: 5 (lower is better)
Translates to: AALVLHGVHHHRALGAPGVGHLE*RYLSRL
Trigger: TAATCTGGACAGATACCTCAATTCTAGGTGACCAAC...GCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CAA 90 bp GCTGGCTGCTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCAAAAGCCCAGCCATCTaGCATAAACTCCCAAATGTT +
Preference number: 5 (lower is better)
Translates to: AGCSGSAWCPPPQGTGGSKSPAI*HKLPNV
Trigger: AACATTTGGGAGTTTATGCAAGATGGCTGGGCTTTT...GGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCAGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529329.1
CDS GCA 90 bp CAGTTTGGGGCCAGACCCCCTAGCTCAGTCGTGTCCTCTAGTCGCTaGCAACGGACCTTCAAGACGAACCAGAAATACTGGGTGCTGAAA +
Preference number: 5 (lower is better)
Translates to: QFGARPPSSVVSSSR*QRTFKTNQKYWVLK
Trigger: TTTCAGCACCCAGTATTTCTGGTTCGTCTTGAAGGTCCGTTGGCAGCGACTAGAGGACACGACTGAGCTAGGGGGTCTGGCCCCAAACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000388876.3
ENST00000526329.1
ENST00000528946.5
ENST00000529589.5
ENST00000532493.5
ENST00000534069.5
ENST00000613679.4
ENST00000617230.2
CDS CCA 90 bp TATCCAGGCCCACTCTGGGGTCAGGAGATGGCAGCAGTCACTGGGTaGAAGCAGGAAGGAGCACCTTGCATAAACTCCCAAATGTTGCAC +
Preference number: 5 (lower is better)
Translates to: YPGPLWGQEMAAVTG*KQEGAPCINSQMLH
Trigger: GTGCAACATTTGGGAGTTTATGCAAGGTGCTCCTTCCTGCTTCCACCCAGTGACTGCTGCCATCTCCTGACCCCAGAGTGGGCCTGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534069.5
CDS-3UTR CAA 90 bp AAGCCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCAGCCAGGATGTTCCGCTaGACTCTGTCTGGAAACAAT +
Preference number: 5 (lower is better)
Translates to: KPAGSQGELSLEKPSRWSARMFR*TLSGNN
Trigger: ATTGTTTCCAGACAGAGTCAAGCGGAACATCCTGGC...TGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp CCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTATAAACTCCCAAATGTaGCACCTCTGTCCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: PAGSQGELSLEKPSRWSPINSQM*HLCPER
Trigger: CCTCTCAGGACAGAGGTGCAACATTTGGGAGTTTAT...AGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000527060.5
ENST00000528946.5
ENST00000610607.4
ENST00000613679.4
ENST00000617230.2
CDS TCA 90 bp CTGCCAACGGACCCGTCTTCTCGCCCATGGCCAGGATGTTCCGCTTaGCTCTGTCTGGAAACAATATCAGAAGCACTTTACCCACGACCA +
Preference number: 5 (lower is better)
Translates to: LPTDPSSRPWPGCSA*LCLETISEALYPRP
Trigger: TGGTCGTGGGTAAAGTGCTTCTGATATTGTTTCCAGACAGAGTCAAGCGGAACATCCTGGCCATGGGCGAGAAGACGGGTCCGTTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000610607.4
CDS TCA 90 bp TCCTGGTCATACCCGTCTTCTCGCCCATGGCCAGGATGTTCCGCTTaGCTCTGTCTGCTGGTGCAGTGGTATGAGAAGCCAAAAATGCCT +
Preference number: 5 (lower is better)
Translates to: SWSYPSSRPWPGCSA*LCLLVQWYEKPKMP
Trigger: AGGCATTTTTGGCTTCTCATACCACTGCACCAGCAGACAGAGTCAAGCGGAACATCCTGGCCATGGGCGAGAAGACGGGTATGACCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529589.5
CDS CCA 90 bp TCTGTATCCAGGCCCACTCTGGGGTCAGGAGATGGCAGCAGTCACTaGGTGGAAGCAGGAAGGAGCACCTTGCATAAACTCCCAAATGTT +
Preference number: 5 (lower is better)
Translates to: SVSRPTLGSGDGSSH*VEAGRSTLHKLPNV
Trigger: AACATTTGGGAGTTTATGCAAGGTGCTCCTTCCTGCTTCCACCCAGTGACTGCTGCCATCTCCTGACCCCAGAGTGGGCCTGGATACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534069.5
CDS-3UTR CAA 90 bp GAACTGTTTCTTCAACAGGGAACTGGCCTGAACAGCTCAAGTGTTGCTTCATTTGGACCACCGGGCAGTTaGGGGCCAGACCCCCTAGCT +
Preference number: 5 (lower is better)
Translates to: ELFLQQGTGLNSSSVASFGPPGS*GPDPLA
Trigger: AGCTAGGGGGTCTGGCCCCAAACTGCCCGGTGGTCC...AAATGAAGCAACACTTGAGCTGTTCAGGCCAGTTCCCTGTTGAAGAAACAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp CTGCTCTGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCCTCTTCAATAAGCCTCTaGAACTGGTCAAATTTGAAC +
Preference number: 5 (lower is better)
Translates to: LLWFCMVSTTTGHWGLLASSISL*NWSNLN
Trigger: GTTCAAATTTGACCAGTTCAAGAGGCTTATTGAAGA...GGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCAGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
CDS GCA 90 bp ACCCGTCTTCTCGCCCATGGCCAGGATGTTCCGCTTGACTCTGTCTaGTGGTGCAGTGGTATGAGAAGCCAAAAATGCCTAAGTGGTAGT +
Preference number: 5 (lower is better)
Translates to: TRLLAHGQDVPLDSV*WCSGMRSQKCLSGS
Trigger: ACTACCACTTAGGCATTTTTGGCTTCTCATACCACTGCACCAGCAGACAGAGTCAAGCGGAACATCCTGGCCATGGGCGAGAAGACGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529589.5
CDS CCA 90 bp ACCCGTCTTCTCGCCCATGGCCAGGATGTTCCGCTTGACTCTGTCTaGAAACAATATCAGAAGCACTTTACCCACGACCACATGCACAGC +
Preference number: 5 (lower is better)
Translates to: TRLLAHGQDVPLDSV*KQYQKHFTHDHMHS
Trigger: GCTGTGCATGTGGTCGTGGGTAAAGTGCTTCTGATATTGTTTCCAGACAGAGTCAAGCGGAACATCCTGGCCATGGGCGAGAAGACGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000388876.3
ENST00000525044.5
ENST00000525202.5
ENST00000526329.1
ENST00000527060.5
ENST00000528946.5
ENST00000529329.1
ENST00000530084.5
ENST00000532493.5
ENST00000610607.4
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp TGGTTCTGCATGGTGTCCACCACCACAGGGCACTGGGGGCTCCTGGCCAGCAGTTCTTCAATAAGCCTCTaGAACTGGTCAAATTTGAAC +
Preference number: 5 (lower is better)
Translates to: WFCMVSTTTGHWGLLASSSSISL*NWSNLN
Trigger: GTTCAAATTTGACCAGTTCAAGAGGCTTATTGAAGA...ACTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACCATGCAGAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
CDS TCA 90 bp TCCTGGTCATACCCGTCTTCTCGCCCATGGCCAGGATGTTCCGCTTaGCTCTGTCTGGAAACAATATCAGAAGCACTTTACCCACGACCA +
Preference number: 5 (lower is better)
Translates to: SWSYPSSRPWPGCSA*LCLETISEALYPRP
Trigger: TGGTCGTGGGTAAAGTGCTTCTGATATTGTTTCCAGACAGAGTCAAGCGGAACATCCTGGCCATGGGCGAGAAGACGGGTATGACCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000388876.3
ENST00000525044.5
ENST00000526329.1
ENST00000528946.5
ENST00000530084.5
ENST00000532493.5
ENST00000613679.4
ENST00000617230.2
CDS TCA 90 bp GTGGCCTATTACCCGTCTTCTCGCCCATGGCCAGGATGTTCCGCTTaGCTCTGTCTGGAAACAATATCAGAAGCACTTTACCCACGACCA +
Preference number: 5 (lower is better)
Translates to: VAYYPSSRPWPGCSA*LCLETISEALYPRP
Trigger: TGGTCGTGGGTAAAGTGCTTCTGATATTGTTTCCAGACAGAGTCAAGCGGAACATCCTGGCCATGGGCGAGAAGACGGGTAATAGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525202.5
CDS-3UTR CAA 90 bp TCTGAGCTAGTGATTCAGCTAGGGACACAGGTCAAGGGTAAAAGCCAGCTGGGTAAGGTTGGTATCCAGTaGTCGTGGCTGAAATGGGGG +
Preference number: 5 (lower is better)
Translates to: SELVIQLGTQVKGKSQLGKVGIQ*SWLKWG
Trigger: CCCCCATTTCAGCCACGACAACTGGATACCAACCTT...ACCCAGCTGGCTTTTACCCTTGACCTGTGTCCCTAGCTGAATCACTAGCTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp GTGCCTGTAGAGTGCAACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTGCCAGCTTGAATTACTaGGTATCAGAGTGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: VPVECNCSLKDRVQGMWSASLNY*VSEWLE
Trigger: CTCCAGCCACTCTGATACCAAGTAATTCAAGCTGGC...AGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGTTGCACTCTACAGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp ACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTGTCAAGGTTATGCTTTaGGGAAGCCAACCCTCCCTT +
Preference number: 5 (lower is better)
Translates to: TALSKTVCRECGLQSGSSVKVML*GSQPSL
Trigger: AAGGGAGGGTTGGCTTCCCAAAAGCATAACCTTGAC...ACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp GCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTGTCGCTGGTGCCTATTGTTaGGTTTGGTCAAGGTTATGC +
Preference number: 5 (lower is better)
Translates to: ALSKTVCRECGLQSGSSVAGAYC*VWSRLC
Trigger: GCATAACCTTGACCAAACCAAACAATAGGCACCAGC...GACACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp CCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTAAGGTTGGTATCCAGTaGTCGTGGCTGAAATGGGGG +
Preference number: 5 (lower is better)
Translates to: PSRWSPRIEVSVQINCGAKVGIQ*SWLKWG
Trigger: CCCCCATTTCAGCCACGACAACTGGATACCAACCTT...AGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000528946.5
ENST00000530084.5
ENST00000617230.2
CDS-3UTR CAA 90 bp TCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGATAAACTCCCAAATGTaGCACCTCTGTCCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: SQGELSLEKPSRWSPRIEINSQM*HLCPER
Trigger: CCTCTCAGGACAGAGGTGCAACATTTGGGAGTTTAT...CTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000527060.5
ENST00000528946.5
ENST00000610607.4
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp CCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTTCTTCAATAAGCCTCTaGAACTGGTCAAATTTGAAC +
Preference number: 5 (lower is better)
Translates to: PAGSQGELSLEKPSRWSPSSISL*NWSNLN
Trigger: GTTCAAATTTGACCAGTTCAAGAGGCTTATTGAAGA...AGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000525044.5
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp CTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTGTCAGGCATTGCTGGTGCCTATaGTTTGGTTTGGTCAAGGTT +
Preference number: 5 (lower is better)
Translates to: LSKTVCRECGLQSGSSVRHCWCL*FGLVKV
Trigger: AACCTTGACCAAACCAAACAATAGGCACCAGCAATG...CCTGACACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp AAGCCAGCTGGGTCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCATCTTCAATAAGCCTCTaGAACTTGCATAAACTCCCA +
Preference number: 5 (lower is better)
Translates to: KPAGSQGELSLEKPSRWSSSISL*NLHKLP
Trigger: TGGGAGTTTATGCAAGTTCAAGAGGCTTATTGAAGA...TGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGACCCAGCTGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528946.5
CDS CCA 90 bp ACGGACCTTCAAGACGAACCAGAAATACTGGGTGCTGAAAAAGGTTaGTATCCAGTTGTCGTGGCTGAAATGGGGGTTCCTGGTCATACC +
Preference number: 5 (lower is better)
Translates to: TDLQDEPEILGAEKG*YPVVVAEMGVPGHT
Trigger: GGTATGACCAGGAACCCCCATTTCAGCCACGACAACTGGATACCAACCTTTTTCAGCACCCAGTATTTCTGGTTCGTCTTGAAGGTCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000388876.3
ENST00000526329.1
ENST00000528946.5
ENST00000529589.5
ENST00000532493.5
ENST00000534069.5
ENST00000613679.4
ENST00000617230.2
CDS CCA 90 bp TCCTCTAGTCGCTGCCAACGGACCTTCAAGACGAACCAGAAATACTaGGTGCTGAAAAAGGTTGGTATCCAGTTGTCGTGGCTGAAATGG +
Preference number: 5 (lower is better)
Translates to: SSSRCQRTFKTNQKY*VLKKVGIQLSWLKW
Trigger: CCATTTCAGCCACGACAACTGGATACCAACCTTTTTCAGCACCCAGTATTTCTGGTTCGTCTTGAAGGTCCGTTGGCAGCGACTAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000388876.3
ENST00000526329.1
ENST00000528946.5
ENST00000529589.5
ENST00000532493.5
ENST00000534069.5
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp GCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAGCCAGGATGTTCCGCTaGACTCTGTCTGGAAACAAT +
Preference number: 5 (lower is better)
Translates to: ALRSPPVGHLELRYLSRLARMFR*TLSGNN
Trigger: ATTGTTTCCAGACAGAGTCAAGCGGAACATCCTGGC...TAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR CAA 90 bp CTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACAAGGTTGGTATCCAGTaGTCGTGGCTGAAATGGGGG +
Preference number: 5 (lower is better)
Translates to: LEKPSRWSPRIEVSVQINKVGIQ*SWLKWG
Trigger: CCCCCATTTCAGCCACGACAACTGGATACCAACCTT...GTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000528946.5
ENST00000530084.5
ENST00000617230.2
CDS-3UTR CAA 90 bp GCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTGTCCAGTGGCCTATTACCTaGCATAAACTCCCAAATGTT +
Preference number: 5 (lower is better)
Translates to: ALSKTVCRECGLQSGSSVQWPIT*HKLPNV
Trigger: AACATTTGGGAGTTTATGCAAGGTAATAGGCCACTG...GACACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp AGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGGTCAAGGTTATGCTTTaGGGAAGCCAACCCTCCCTT +
Preference number: 5 (lower is better)
Translates to: SPPVGHLELRYLSRLTVEVKVML*GSQPSL
Trigger: AAGGGAGGGTTGGCTTCCCAAAAGCATAACCTTGAC...CTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR CAA 90 bp CTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGGCTGGTGCCTATTGTTaGGTTTGGTCAAGGTTATGC +
Preference number: 5 (lower is better)
Translates to: LSLEKPSRWSPRIEVSVQAGAYC*VWSRLC
Trigger: GCATAACCTTGACCAAACCAAACAATAGGCACCAGC...CTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp GAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCGCTGGTGCCTATTGTTaGGTTTGGTCAAGGTTATGC +
Preference number: 5 (lower is better)
Translates to: ELSLEKPSRWSPRIEVSVAGAYC*VWSRLC
Trigger: GCATAACCTTGACCAAACCAAACAATAGGCACCAGC...GACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp CTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACGCCAGGATGTTCCGCTaGACTCTGTCTGGAAACAAT +
Preference number: 5 (lower is better)
Translates to: LEKPSRWSPRIEVSVQINARMFR*TLSGNN
Trigger: ATTGTTTCCAGACAGAGTCAAGCGGAACATCCTGGC...GTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR CAA 90 bp GCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAATAAACTCCCAAATGTaGCACCTCTGTCCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: ALRSPPVGHLELRYLSRLINSQM*HLCPER
Trigger: CCTCTCAGGACAGAGGTGCAACATTTGGGAGTTTAT...TAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322679.10
ENST00000527060.5
ENST00000528946.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR CAA 90 bp CCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTATAAACTCCCAAATGTaGCACCTCTGTCCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: PSRWSPRIEVSVQINCGAINSQM*HLCPER
Trigger: CCTCTCAGGACAGAGGTGCAACATTTGGGAGTTTAT...AGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322679.10
ENST00000527060.5
ENST00000528946.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR CAA 90 bp ACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTCAGTGGCCTATTACCTaGCATAAACTCCCAAATGTT +
Preference number: 5 (lower is better)
Translates to: TALSKTVCRECGLQSGSSQWPIT*HKLPNV
Trigger: AACATTTGGGAGTTTATGCAAGGTAATAGGCCACTG...ACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp TCTCAGGGAGAGCTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTTGGTCACCTAGAATaGAGGTATCTGTCCAGATTA +
Preference number: 5 (lower is better)
Translates to: SQGELSLEKPSRWSPRIEVGHLE*RYLSRL
Trigger: TAATCTGGACAGATACCTCAATTCTAGGTGACCAAC...CTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAGCTCTCCCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp GCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTGTCTCAGCTGGGAGTTGTTaGCTTAGATCAGAAAAATCT +
Preference number: 5 (lower is better)
Translates to: ALSKTVCRECGLQSGSSVSAGSC*LRSEKS
Trigger: AGATTTTTCTGATCTAAGCAAACAACTCCCAGCTGA...GACACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp CCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCGCCAGGATGTTCCGCTaGACTCTGTCTGGAAACAAT +
Preference number: 5 (lower is better)
Translates to: PVGHLELRYLSRLTVELFARMFR*TLSGNN
Trigger: ATTGTTTCCAGACAGAGTCAAGCGGAACATCCTGGC...GAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR CAA 90 bp CGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCCAAAGGTTGGTATCCAGTaGTCGTGGCTGAAATGGGGG +
Preference number: 5 (lower is better)
Translates to: RWSPRIEVSVQINCGAFPKVGIQ*SWLKWG
Trigger: CCCCCATTTCAGCCACGACAACTGGATACCAACCTT...TGGAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000528946.5
ENST00000530084.5
ENST00000617230.2
CDS-3UTR CAA 90 bp GCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTGTCTCTTCAATAAGCCTCTaGAACTGGTCAAATTTGAAC +
Preference number: 5 (lower is better)
Translates to: ALSKTVCRECGLQSGSSVSSISL*NWSNLN
Trigger: GTTCAAATTTGACCAGTTCAAGAGGCTTATTGAAGA...GACACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp CTAAGCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGGTTGGTCACCTAGAATaGAGGTATCTGTCCAGATTA +
Preference number: 5 (lower is better)
Translates to: LSLEKPSRWSPRIEVSVQVGHLE*RYLSRL
Trigger: TAATCTGGACAGATACCTCAATTCTAGGTGACCAAC...CTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp TCTGAGCTAGTGATTCAGCTAGGGACACAGGTCAAGGGTAAAAGCCAGCTGGGTGTTGGTCACCTAGAATaGAGGTATCTGTCCAGATTA +
Preference number: 5 (lower is better)
Translates to: SELVIQLGTQVKGKSQLGVGHLE*RYLSRL
Trigger: TAATCTGGACAGATACCTCAATTCTAGGTGACCAAC...ACCCAGCTGGCTTTTACCCTTGACCTGTGTCCCTAGCTGAATCACTAGCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp ACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTTCAGCTGGGAGTTGTTaGCTTAGATCAGAAAAATCT +
Preference number: 5 (lower is better)
Translates to: TALSKTVCRECGLQSGSSSAGSC*LRSEKS
Trigger: AGATTTTTCTGATCTAAGCAAACAACTCCCAGCTGA...ACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp GGAACTGTTTCTTCAACAGGGAACTGGCCTGAACAGCTCAAGTGTTGCTTCATTGCCAGCTTGAATTACTaGGTATCAGAGTGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: GTVSSTGNWPEQLKCCFIASLNY*VSEWLE
Trigger: CTCCAGCCACTCTGATACCAAGTAATTCAAGCTGGC...AATGAAGCAACACTTGAGCTGTTCAGGCCAGTTCCCTGTTGAAGAAACAGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp ACTGCTCTCTCAAAGACCGTGTGCAGGGAATGTGGTCTCCAAAGTGGGAGCAGTTGCCTATTGTTTGGTTaGGTCAAGGTTATGCTTTTG +
Preference number: 5 (lower is better)
Translates to: TALSKTVCRECGLQSGSSCLLFG*VKVMLL
Trigger: CAAAAGCATAACCTTGACCAAACCAAACAATAGGCA...ACTGCTCCCACTTTGGAGACCACATTCCCTGCACACGGTCTTTGAGAGAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp CTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACGCTGGTGCCTATTGTTaGGTTTGGTCAAGGTTATGC +
Preference number: 5 (lower is better)
Translates to: LEKPSRWSPRIEVSVQINAGAYC*VWSRLC
Trigger: GCATAACCTTGACCAAACCAAACAATAGGCACCAGC...GTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR CAA 90 bp AGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCATTGCTGGTGCCTATaGTTTGGTTTGGTCAAGGTT +
Preference number: 5 (lower is better)
Translates to: SPPVGHLELRYLSRLTVEHCWCL*FGLVKV
Trigger: AACCTTGACCAAACCAAACAATAGGCACCAGCAATG...CTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR CAA 90 bp CCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTCATTGCTGGTGCCTATaGTTTGGTTTGGTCAAGGTT +
Preference number: 5 (lower is better)
Translates to: PSRWSPRIEVSVQINCGAHCWCL*FGLVKV
Trigger: AACCTTGACCAAACCAAACAATAGGCACCAGCAATG...AGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS GCA 90 bp CCGCTTGACTCTGTCTGCTGGTGCAGTGGTATGAGAAGCCAAAAATaGCTAAGTGGTAGTTACAGCTTCCAATTCAGTGGAACTGTAACT +
Preference number: 5 (lower is better)
Translates to: PLDSVCWCSGMRSQK*LSGSYSFQFSGTVT
Trigger: AGTTACAGTTCCACTGAATTGGAAGCTGTAACTACCACTTAGGCATTTTTGGCTTCTCATACCACTGCACCAGCAGACAGAGTCAAGCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529589.5
CDS CCA 90 bp TATTACCTTCAAGACGAACCAGAAATACTGGGTGCTGAAAAAGGTTaGTATCCAGTTGTCGTGGCTGAAATGGGGGTTCCTGGTCATACC +
Preference number: 5 (lower is better)
Translates to: YYLQDEPEILGAEKG*YPVVVAEMGVPGHT
Trigger: GGTATGACCAGGAACCCCCATTTCAGCCACGACAACTGGATACCAACCTTTTTCAGCACCCAGTATTTCTGGTTCGTCTTGAAGGTAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525044.5
ENST00000530084.5
CDS-3UTR CAA 90 bp TCCTCAGCTGGGAGTTGTTTGCTTAGATCAGAAAAATCTGAGCTAGTGATTCAGAAGGTTGGTATCCAGTaGTCGTGGCTGAAATGGGGG +
Preference number: 5 (lower is better)
Translates to: SSAGSCLLRSEKSELVIQKVGIQ*SWLKWG
Trigger: CCCCCATTTCAGCCACGACAACTGGATACCAACCTT...CTGAATCACTAGCTCAGATTTTTCTGATCTAAGCAAACAACTCCCAGCTGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp ACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAAATCTTTTGAAGGTTGGTATCCAGTaGTCGTGGCTGAAATGGGGG +
Preference number: 5 (lower is better)
Translates to: TMETHPSSPPMWTGLNLLKVGIQ*SWLKWG
Trigger: CCCCCATTTCAGCCACGACAACTGGATACCAACCTT...CAAAAGATTTAAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp AGTTCCAAGGGCCAGATTTACCCTTGTAGAGGATCCTGCCCTCCTGGATTATGTCAGTGGCCTATTACCTaGCATAAACTCCCAAATGTT +
Preference number: 5 (lower is better)
Translates to: SSKGQIYPCRGSCPPGLCQWPIT*HKLPNV
Trigger: AACATTTGGGAGTTTATGCAAGGTAATAGGCCACTG...ACATAATCCAGGAGGGCAGGATCCTCTACAAGGGTAAATCTGGCCCTTGGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527060.5
ENST00000610607.4
CDS-3UTR CAA 90 bp GCCTTGAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAGTTGGTCACCTAGAATaGAGGTATCTGTCCAGATTA +
Preference number: 5 (lower is better)
Translates to: ALRSPPVGHLELRYLSRLVGHLE*RYLSRL
Trigger: TAATCTGGACAGATACCTCAATTCTAGGTGACCAAC...TAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTCAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR CAA 90 bp TTTCTGATGTCCATGTTGTTCTTAAAAGCCCAGCCATCTGATGCATGTGCTTCTGCCAGGATGTTCCGCTaGACTCTGTCTGGAAACAAT +
Preference number: 5 (lower is better)
Translates to: FLMSMLFLKAQPSDACASARMFR*TLSGNN
Trigger: ATTGTTTCCAGACAGAGTCAAGCGGAACATCCTGGC...AGAAGCACATGCATCAGATGGCTGGGCTTTTAAGAACAACATGGACATCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CAA 90 bp GAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTCAGTGGCCTATTACCTaGCATAAACTCCCAAATGTT +
Preference number: 5 (lower is better)
Translates to: EKPSRWSPRIEVSVQINCQWPIT*HKLPNV
Trigger: AACATTTGGGAGTTTATGCAAGGTAATAGGCCACTG...ACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000527060.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR CAA 90 bp TCCTCAGCTGGGAGTTGTTTGCTTAGATCAGAAAAATCTGAGCTAGTGATTCAGGCCAGCTTGAATTACTaGGTATCAGAGTGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: SSAGSCLLRSEKSELVIQASLNY*VSEWLE
Trigger: CTCCAGCCACTCTGATACCAAGTAATTCAAGCTGGC...CTGAATCACTAGCTCAGATTTTTCTGATCTAAGCAAACAACTCCCAGCTGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp TCCTCAGCTGGGAGTTGTTTGCTTAGATCAGAAAAATCTGAGCTAGTGATTCAGGTCAAGGTTATGCTTTaGGGAAGCCAACCCTCCCTT +
Preference number: 5 (lower is better)
Translates to: SSAGSCLLRSEKSELVIQVKVML*GSQPSL
Trigger: AAGGGAGGGTTGGCTTCCCAAAAGCATAACCTTGAC...CTGAATCACTAGCTCAGATTTTTCTGATCTAAGCAAACAACTCCCAGCTGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp CCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTGCCTATTGTTTGGTTaGGTCAAGGTTATGCTTTTG +
Preference number: 5 (lower is better)
Translates to: PSRWSPRIEVSVQINCGACLLFG*VKVMLL
Trigger: CAAAAGCATAACCTTGACCAAACCAAACAATAGGCA...AGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR CAA 90 bp GAGAAGCCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTTCAGCTGGGAGTTGTTaGCTTAGATCAGAAAAATCT +
Preference number: 5 (lower is better)
Translates to: EKPSRWSPRIEVSVQINCSAGSC*LRSEKS
Trigger: AGATTTTTCTGATCTAAGCAAACAACTCCCAGCTGA...ACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGGCTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322679.10
ENST00000617230.2
CDS-3UTR CAA 90 bp ATAACATTTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCAGTCAAGGTTATGCTTTaGGGAAGCCAACCCTCCCTT +
Preference number: 5 (lower is better)
Translates to: ITFSFESSHSRVYFRLWPVKVML*GSQPSL
Trigger: AAGGGAGGGTTGGCTTCCCAAAAGCATAACCTTGAC...TGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAAATGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp CCCTCCCGTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTATAAGCCTCTTGAACTaGCATAAACTCCCAAATGTT +
Preference number: 5 (lower is better)
Translates to: PSRWSPRIEVSVQINCGAISLLN*HKLPNV
Trigger: AACATTTGGGAGTTTATGCAAGTTCAAGAGGCTTAT...AGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAACGGGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528946.5
CDS-3UTR CAA 90 bp TACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAAATCTTTTATAAACTCCCAAATGTaGCACCTCTGTCCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: YHGNSPIITTNVDRFKSFINSQM*HLCPER
Trigger: CCTCTCAGGACAGAGGTGCAACATTTGGGAGTTTAT...AAAAGATTTAAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp GTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCCAGGTTGGTCACCTAGAATaGAGGTATCTGTCCAGATTA +
Preference number: 5 (lower is better)
Translates to: VGHLELRYLSRLTVELFQVGHLE*RYLSRL
Trigger: TAATCTGGACAGATACCTCAATTCTAGGTGACCAAC...CTGGAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000528946.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR CAA 90 bp TCCTCAGCTGGGAGTTGTTTGCTTAGATCAGAAAAATCTGAGCTAGTGATTCAGCATTGCTGGTGCCTATaGTTTGGTTTGGTCAAGGTT +
Preference number: 5 (lower is better)
Translates to: SSAGSCLLRSEKSELVIQHCWCL*FGLVKV
Trigger: AACCTTGACCAAACCAAACAATAGGCACCAGCAATG...CTGAATCACTAGCTCAGATTTTTCTGATCTAAGCAAACAACTCCCAGCTGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp GAACTGTTTCTTCAACAGGGAACTGGCCTGAACAGCTCAAGTGTTGCTTCATTTTGCCTATTGTTTGGTTaGGTCAAGGTTATGCTTTTG +
Preference number: 5 (lower is better)
Translates to: ELFLQQGTGLNSSSVASFCLLFG*VKVMLL
Trigger: CAAAAGCATAACCTTGACCAAACCAAACAATAGGCA...AAATGAAGCAACACTTGAGCTGTTCAGGCCAGTTCCCTGTTGAAGAAACAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp TACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAAATCTTTTCAGTGGCCTATTACCTaGCATAAACTCCCAAATGTT +
Preference number: 5 (lower is better)
Translates to: YHGNSPIITTNVDRFKSFQWPIT*HKLPNV
Trigger: AACATTTGGGAGTTTATGCAAGGTAATAGGCCACTG...AAAAGATTTAAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp GTTGGTCACCTAGAATTGAGGTATCTGTCCAGATTAACTGTGGAGCTTTTCCAGTCTTCAATAAGCCTCTaGAACTGGTCAAATTTGAAC +
Preference number: 5 (lower is better)
Translates to: VGHLELRYLSRLTVELFQSSISL*NWSNLN
Trigger: GTTCAAATTTGACCAGTTCAAGAGGCTTATTGAAGA...CTGGAAAAGCTCCACAGTTAATCTGGACAGATACCTCAATTCTAGGTGACCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322679.10
ENST00000525044.5
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
ENST00000617230.2
CDS-3UTR CAA 90 bp TTTCTTTTGAATCAAGTCACAGCCGTGTGTACTTTAGGCTGTGGCCATCATAAAGTTGGTCACCTAGAATaGAGGTATCTGTCCAGATTA +
Preference number: 5 (lower is better)
Translates to: FLLNQVTAVCTLGCGHHKVGHLE*RYLSRL
Trigger: TAATCTGGACAGATACCTCAATTCTAGGTGACCAAC...TTTATGATGGCCACAGCCTAAAGTACACACGGCTGTGACTTGATTCAAAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp CTAACACAAATGACCATTAAGAGACTTGCGAAGAAATCAGAGAAACAGAATTTCATAAACTCCCAAATGTaGCACCTCTGTCCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: LTQMTIKRLAKKSEKQNFINSQM*HLCPER
Trigger: CCTCTCAGGACAGAGGTGCAACATTTGGGAGTTTAT...GAAATTCTGTTTCTCTGATTTCTTCGCAAGTCTCTTAATGGTCATTTGTGTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp TCCTCAGCTGGGAGTTGTTTGCTTAGATCAGAAAAATCTGAGCTAGTGATTCAGTCTTCAATAAGCCTCTaGAACTGGTCAAATTTGAAC +
Preference number: 5 (lower is better)
Translates to: SSAGSCLLRSEKSELVIQSSISL*NWSNLN
Trigger: GTTCAAATTTGACCAGTTCAAGAGGCTTATTGAAGA...CTGAATCACTAGCTCAGATTTTTCTGATCTAAGCAAACAACTCCCAGCTGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp ACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAAATCTTTTGTCTTCAATAAGCCTCTaGAACTGGTCAAATTTGAAC +
Preference number: 5 (lower is better)
Translates to: TMETHPSSPPMWTGLNLLSSISL*NWSNLN
Trigger: GTTCAAATTTGACCAGTTCAAGAGGCTTATTGAAGA...CAAAAGATTTAAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp TACCATGGAAACTCACCCATCATCACCACCAATGTGGACAGGTTTAAATCTTTTTGCCTATTGTTTGGTTaGGTCAAGGTTATGCTTTTG +
Preference number: 5 (lower is better)
Translates to: YHGNSPIITTNVDRFKSFCLLFG*VKVMLL
Trigger: CAAAAGCATAACCTTGACCAAACCAAACAATAGGCA...AAAAGATTTAAACCTGTCCACATTGGTGGTGATGATGGGTGAGTTTCCATGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS TCA 90 bp AAAGTCTTCAATAAGCCTCTTGAACTGGTCAAATTTGAACATAAATaGAGGGGTACAACTTCCAAAATTCAGCACCAGTGGCCTATTACC +
Preference number: 5 (lower is better)
Translates to: KVFNKPLELVKFEHK*RGTTSKIQHQWPIT
Trigger: GGTAATAGGCCACTGGTGCTGAATTTTGGAAGTTGTACCCCTTCATTTATGTTCAAATTTGACCAGTTCAAGAGGCTTATTGAAGACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613679.4
ENST00000617230.2
CDS-3UTR CAA 90 bp AGCCTCTTGAACTGGTCAAATTTGAACATAAATGAAGGTCAGGTACAACTTCCATCTTCAATAAGCCTCTaGAACTGGTCAAATTTGAAC +
Preference number: 5 (lower is better)
Translates to: SLLNWSNLNINEGQVQLPSSISL*NWSNLN
Trigger: GTTCAAATTTGACCAGTTCAAGAGGCTTATTGAAGA...TGGAAGTTGTACCTGACCTTCATTTATGTTCAAATTTGACCAGTTCAAGAGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525044.5
ENST00000527060.5
ENST00000530084.5
ENST00000610607.4
CDS-3UTR CAA 90 bp CTAACACAAATGACCATTAAGAGACTTGCGAAGAAATCAGAGAAACAGAATTTCTCAGCTGGGAGTTGTTaGCTTAGATCAGAAAAATCT +
Preference number: 5 (lower is better)
Translates to: LTQMTIKRLAKKSEKQNFSAGSC*LRSEKS
Trigger: AGATTTTTCTGATCTAAGCAAACAACTCCCAGCTGA...GAAATTCTGTTTCTCTGATTTCTTCGCAAGTCTCTTAATGGTCATTTGTGTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000613679.4
ENST00000617230.2
CDS GCA 72 bp TGCACTATGGCACTGCGAGCCCGGGATGGGGACAGCTaGCATGCAACACTGGGGGACGTGACACCTGACCCC +
Preference number: 6 (lower is better)
Translates to: CTMALRARDGDS*HATLGDVTPDP
Trigger: GGGGTCAGGTGTCACGTCCCCCAGTGTTGCATGGCAGCTGTCCCCATCCCGGGCTCGCAGTGCCATAGTGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534069.5
CDS CAA 72 bp TGCACCTCTGTCCTGAGAGGCGGACCACCGGGCAGTTaGGGGCCAGACCCCCTAGCGTCGTGTCCTCTAGTC +
Preference number: 6 (lower is better)
Translates to: CTSVLRGGPPGS*GPDPLASCPLV
Trigger: GACTAGAGGACACGACGCTAGGGGGTCTGGCCCCAAACTGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610607.4
CDS CAA 72 bp TGCACCTCTGTCCTGAGAGGCGGACCACCGGGCAGTTaGGGGCCAGACCCCCTAGCTCAGTCGTGTCCTCTA +
Preference number: 6 (lower is better)
Translates to: CTSVLRGGPPGS*GPDPLAQSCPL
Trigger: TAGAGGACACGACTGAGCTAGGGGGTCTGGCCCCAAACTGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000388876.3
ENST00000524406.5
ENST00000526329.1
ENST00000527060.5
ENST00000528946.5
ENST00000529329.1
ENST00000529589.5
ENST00000532493.5
ENST00000534069.5
ENST00000613679.4
ENST00000617230.2
CDS CAA 90 bp CCCAAATGTTGCACCTCTGTCCTGAGAGGCGGACCACCGGGCAGTTaGGGGCCAGACCCCCTAGCTCAGTCGTGTCCTCTAGTCGCTGCC +
Preference number: 6 (lower is better)
Translates to: PKCCTSVLRGGPPGS*GPDPLAQSCPLVAA
Trigger: GGCAGCGACTAGAGGACACGACTGAGCTAGGGGGTCTGGCCCCAAACTGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCAACATTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000388876.3
ENST00000524406.5
ENST00000526329.1
ENST00000527060.5
ENST00000528946.5
ENST00000529329.1
ENST00000529589.5
ENST00000532493.5
ENST00000534069.5
ENST00000613679.4
ENST00000617230.2
CDS CAA 90 bp CCCAAATGTTGCACCTCTGTCCTGAGAGGCGGACCACCGGGCAGTTaGGGGCCAGACCCCCTAGCGTCGTGTCCTCTAGTCGCTGCCAAC +
Preference number: 6 (lower is better)
Translates to: PKCCTSVLRGGPPGS*GPDPLASCPLVAAN
Trigger: GTTGGCAGCGACTAGAGGACACGACGCTAGGGGGTCTGGCCCCAAACTGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCAACATTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610607.4
CDS GCA 72 bp CAAGAGGCTTCCCCCACCCTCAGTCACTTGGCGAATTaGACTATGGCACTGCGAGCCCGGGATGGGGACAGC +
Preference number: 6 (lower is better)
Translates to: QEASPTLSHLAN*TMALRARDGDS
Trigger: GCTGTCCCCATCCCGGGCTCGCAGTGCCATAGTGCAATTCGCCAAGTGACTGAGGGTGGGGGAAGCCTCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534069.5
CDS CCA 72 bp CTTCCCCCACCCTCAGTCACTTGGCGAATTGCACTATaGCACTGCGAGCCCGGGATGGGGACAGCTGCCATG +
Preference number: 6 (lower is better)
Translates to: LPPPSVTWRIAL*HCEPGMGTAAM
Trigger: CATGGCAGCTGTCCCCATCCCGGGCTCGCAGTGCCATAGTGCAATTCGCCAAGTGACTGAGGGTGGGGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534069.5
CDS CCA 72 bp AGGGTGGGCAAGAGGCTTCCCCCACCCTCAGTCACTTaGCGAATTGCACTATGGCACTGCGAGCCCGGGATG +
Preference number: 6 (lower is better)
Translates to: RVGKRLPPPSVT*RIALWHCEPGM
Trigger: CATCCCGGGCTCGCAGTGCCATAGTGCAATTCGCCAAGTGACTGAGGGTGGGGGAAGCCTCTTGCCCACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534069.5
CDS CAA 72 bp GCAAGAGGCTTCCCCCACCCTCAGTCACTTGGCGAATaGCACTATGGCACTGCGAGCCCGGGATGGGGACAG +
Preference number: 6 (lower is better)
Translates to: ARGFPHPQSLGE*HYGTASPGWGQ
Trigger: CTGTCCCCATCCCGGGCTCGCAGTGCCATAGTGCAATTCGCCAAGTGACTGAGGGTGGGGGAAGCCTCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534069.5
CDS TCA 72 bp GGACAGCTGCCATGCAACACTGGGGGACGTGACACCTaGCCCCCACCTTCCTCATGTCTGTATCCAGGCCCA +
Preference number: 6 (lower is better)
Translates to: GQLPCNTGGRDT*PPPSSCLYPGP
Trigger: TGGGCCTGGATACAGACATGAGGAAGGTGGGGGTCAGGTGTCACGTCCCCCAGTGTTGCATGGCAGCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534069.5
CDS GCA 72 bp CCACCCTCAGTCACTTGGCGAATTGCACTATGGCACTaGGAGCCCGGGATGGGGACAGCTGCCATGCAACAC +
Preference number: 6 (lower is better)
Translates to: PPSVTWRIALWH*EPGMGTAAMQH
Trigger: GTGTTGCATGGCAGCTGTCCCCATCCCGGGCTCGCAGTGCCATAGTGCAATTCGCCAAGTGACTGAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534069.5
CDS CCA 72 bp CCCCCACCTTCCTCATGTCTGTATCCAGGCCCACTCTaGGGTCAGGAGATGGCAGCAGTCACTGGGTGGAAG +
Preference number: 6 (lower is better)
Translates to: PPPSSCLYPGPL*GQEMAAVTGWK
Trigger: CTTCCACCCAGTGACTGCTGCCATCTCCTGACCCCAGAGTGGGCCTGGATACAGACATGAGGAAGGTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534069.5
CDS CAA 72 bp AAGGGTGGGCAAGAGGCTTCCCCCACCCTCAGTCACTaGGCGAATTGCACTATGGCACTGCGAGCCCGGGAT +
Preference number: 6 (lower is better)
Translates to: KGGQEASPTLSH*ANCTMALRARD
Trigger: ATCCCGGGCTCGCAGTGCCATAGTGCAATTCGCCAAGTGACTGAGGGTGGGGGAAGCCTCTTGCCCACCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534069.5
CDS TCA 72 bp CCCTTGCATAAACTCCCAAATGTTGCACCTCTGTCCTaGGAGGCGGACCACCGGGCAGTTTGGGGCCAGACC +
Preference number: 6 (lower is better)
Translates to: PLHKLPNVAPLS*EADHRAVWGQT
Trigger: GGTCTGGCCCCAAACTGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCAACATTTGGGAGTTTATGCAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532493.5
CDS CAA 90 bp ACTGGGTGGAAGCAGGAAGGAGCACCTTGCATAAACTCCCAAATGTaGCACCTCTGTCCTGAGAGGCGGACCACCGGGCAGTTTGGGGCC +
Preference number: 6 (lower is better)
Translates to: TGWKQEGAPCINSQM*HLCPERRTTGQFGA
Trigger: GGCCCCAAACTGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCAACATTTGGGAGTTTATGCAAGGTGCTCCTTCCTGCTTCCACCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534069.5
CDS CCA 72 bp AGGCCCACTCTGGGGTCAGGAGATGGCAGCAGTCACTaGGTGGAAGCAGGAAGGAGCACCTTGCATAAACTC +
Preference number: 6 (lower is better)
Translates to: RPTLGSGDGSSH*VEAGRSTLHKL
Trigger: GAGTTTATGCAAGGTGCTCCTTCCTGCTTCCACCCAGTGACTGCTGCCATCTCCTGACCCCAGAGTGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534069.5
CDS TCA 72 bp AACTTGCATAAACTCCCAAATGTTGCACCTCTGTCCTaGGAGGCGGACCACCGGGCAGTTTGGGGCCAGACC +
Preference number: 6 (lower is better)
Translates to: NLHKLPNVAPLS*EADHRAVWGQT
Trigger: GGTCTGGCCCCAAACTGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCAACATTTGGGAGTTTATGCAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528946.5
CDS TCA 72 bp TACCCGTCTTCTCGCCCATGGCCAGGATGTTCCGCTTaGCTCTGTCTGCTGGTGCAGTGGTATGAGAAGCCA +
Preference number: 6 (lower is better)
Translates to: YPSSRPWPGCSA*LCLLVQWYEKP
Trigger: TGGCTTCTCATACCACTGCACCAGCAGACAGAGTCAAGCGGAACATCCTGGCCATGGGCGAGAAGACGGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529589.5
CDS GCA 72 bp GCCAGACCCCCTAGCTCAGTCGTGTCCTCTAGTCGCTaGCAACGGACCTTCAAGACGAACCAGAAATACTGG +
Preference number: 6 (lower is better)
Translates to: ARPPSSVVSSSR*QRTFKTNQKYW
Trigger: CCAGTATTTCTGGTTCGTCTTGAAGGTCCGTTGGCAGCGACTAGAGGACACGACTGAGCTAGGGGGTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000388876.3
ENST00000524406.5
ENST00000526329.1
ENST00000528946.5
ENST00000529589.5
ENST00000532493.5
ENST00000534069.5
ENST00000613679.4
ENST00000617230.2
CDS CCA 72 bp CCACTCTGGGGTCAGGAGATGGCAGCAGTCACTGGGTaGAAGCAGGAAGGAGCACCTTGCATAAACTCCCAA +
Preference number: 6 (lower is better)
Translates to: PLWGQEMAAVTG*KQEGAPCINSQ
Trigger: TTGGGAGTTTATGCAAGGTGCTCCTTCCTGCTTCCACCCAGTGACTGCTGCCATCTCCTGACCCCAGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534069.5
CDS CAA 72 bp AAGCAGGAAGGAGCACCTTGCATAAACTCCCAAATGTaGCACCTCTGTCCTGAGAGGCGGACCACCGGGCAG +
Preference number: 6 (lower is better)
Translates to: KQEGAPCINSQM*HLCPERRTTGQ
Trigger: CTGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCAACATTTGGGAGTTTATGCAAGGTGCTCCTTCCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534069.5
CDS CAA 90 bp GCTGCCAACGGACCCGTCTTCTCGCCCATGGCCAGGATGTTCCGCTaGACTCTGTCTGGAAACAATATCAGAAGCACTTTACCCACGACC +
Preference number: 6 (lower is better)
Translates to: AANGPVFSPMARMFR*TLSGNNIRSTLPTT
Trigger: GGTCGTGGGTAAAGTGCTTCTGATATTGTTTCCAGACAGAGTCAAGCGGAACATCCTGGCCATGGGCGAGAAGACGGGTCCGTTGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000610607.4
CDS CAA 72 bp AAGGGCCAGATTTACCCTTGCATAAACTCCCAAATGTaGCACCTCTGTCCTGAGAGGCGGACCACCGGGCAG +
Preference number: 6 (lower is better)
Translates to: KGQIYPCINSQM*HLCPERRTTGQ
Trigger: CTGCCCGGTGGTCCGCCTCTCAGGACAGAGGTGCAACATTTGGGAGTTTATGCAAGGGTAAATCTGGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532493.5
CDS CCA 72 bp CTCGCCCATGGCCAGGATGTTCCGCTTGACTCTGTCTaGAAACAATATCAGAAGCACTTTACCCACGACCAC +
Preference number: 6 (lower is better)
Translates to: LAHGQDVPLDSV*KQYQKHFTHDH
Trigger: GTGGTCGTGGGTAAAGTGCTTCTGATATTGTTTCCAGACAGAGTCAAGCGGAACATCCTGGCCATGGGCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000388876.3
ENST00000525044.5
ENST00000525202.5
ENST00000526329.1
ENST00000527060.5
ENST00000528946.5
ENST00000529329.1
ENST00000530084.5
ENST00000532493.5
ENST00000610607.4
ENST00000613679.4
ENST00000617230.2
CDS CAA 90 bp AGTGGCCTATTACCCGTCTTCTCGCCCATGGCCAGGATGTTCCGCTaGACTCTGTCTGGAAACAATATCAGAAGCACTTTACCCACGACC +
Preference number: 6 (lower is better)
Translates to: SGLLPVFSPMARMFR*TLSGNNIRSTLPTT
Trigger: GGTCGTGGGTAAAGTGCTTCTGATATTGTTTCCAGACAGAGTCAAGCGGAACATCCTGGCCATGGGCGAGAAGACGGGTAATAGGCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525202.5
CDS TCA 72 bp GACCCGTCTTCTCGCCCATGGCCAGGATGTTCCGCTTaGCTCTGTCTGGAAACAATATCAGAAGCACTTTAC +
Preference number: 6 (lower is better)
Translates to: DPSSRPWPGCSA*LCLETISEALY
Trigger: GTAAAGTGCTTCTGATATTGTTTCCAGACAGAGTCAAGCGGAACATCCTGGCCATGGGCGAGAAGACGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527060.5
ENST00000529329.1
ENST00000610607.4
CDS CCA 72 bp TACTGGGTGCTGAAAAAGGTTGGTATCCAGTTGTCGTaGCTGAAATGGGGGTTCCTGGTCATACCCGTCTTC +
Preference number: 6 (lower is better)
Translates to: YWVLKKVGIQLS*LKWGFLVIPVF
Trigger: GAAGACGGGTATGACCAGGAACCCCCATTTCAGCCACGACAACTGGATACCAACCTTTTTCAGCACCCAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000388876.3
ENST00000525044.5
ENST00000526329.1
ENST00000528946.5
ENST00000529589.5
ENST00000530084.5
ENST00000532493.5
ENST00000534069.5
ENST00000613679.4
ENST00000617230.2
CDS CAA 90 bp AAGACGAACCAGAAATACTGGGTGCTGAAAAAGGTTGGTATCCAGTaGTCGTGGCTGAAATGGGGGTTCCTGGTCATACCCGTCTTCTCG +
Preference number: 6 (lower is better)
Translates to: KTNQKYWVLKKVGIQ*SWLKWGFLVIPVFS
Trigger: CGAGAAGACGGGTATGACCAGGAACCCCCATTTCAGCCACGACAACTGGATACCAACCTTTTTCAGCACCCAGTATTTCTGGTTCGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000388876.3
ENST00000525044.5
ENST00000526329.1
ENST00000528946.5
ENST00000529589.5
ENST00000530084.5
ENST00000532493.5
ENST00000534069.5
ENST00000613679.4
ENST00000617230.2
CDS TCA 72 bp TACCCGTCTTCTCGCCCATGGCCAGGATGTTCCGCTTaGCTCTGTCTGGAAACAATATCAGAAGCACTTTAC +
Preference number: 6 (lower is better)
Translates to: YPSSRPWPGCSA*LCLETISEALY
Trigger: GTAAAGTGCTTCTGATATTGTTTCCAGACAGAGTCAAGCGGAACATCCTGGCCATGGGCGAGAAGACGGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000388876.3
ENST00000525044.5
ENST00000525202.5
ENST00000526329.1
ENST00000528946.5
ENST00000530084.5
ENST00000532493.5
ENST00000613679.4
ENST00000617230.2
CDS CCA 72 bp ACTGTGGAGCTTTTCCAGAACAGCACGAACTTCCTCTaGGTTGTAGTTCCAAGGGCCAGATTTACCCTTGCA +
Preference number: 6 (lower is better)
Translates to: TVELFQNSTNFL*VVVPRARFTLA
Trigger: TGCAAGGGTAAATCTGGCCCTTGGAACTACAACCCAGAGGAAGTTCGTGCTGTTCTGGAAAAGCTCCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532493.5
CDS CAA 72 bp CAGAAATACTGGGTGCTGAAAAAGGTTGGTATCCAGTaGTCGTGGCTGAAATGGGGGTTCCTGGTCATACCC +
Preference number: 6 (lower is better)
Translates to: QKYWVLKKVGIQ*SWLKWGFLVIP
Trigger: GGGTATGACCAGGAACCCCCATTTCAGCCACGACAACTGGATACCAACCTTTTTCAGCACCCAGTATTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000388876.3
ENST00000525044.5
ENST00000526329.1
ENST00000528946.5
ENST00000529589.5
ENST00000530084.5
ENST00000532493.5
ENST00000534069.5
ENST00000613679.4
ENST00000617230.2
CDS CCA 72 bp CAAGACGAACCAGAAATACTGGGTGCTGAAAAAGGTTaGTATCCAGTTGTCGTGGCTGAAATGGGGGTTCCT +
Preference number: 6 (lower is better)
Translates to: QDEPEILGAEKG*YPVVVAEMGVP
Trigger: AGGAACCCCCATTTCAGCCACGACAACTGGATACCAACCTTTTTCAGCACCCAGTATTTCTGGTTCGTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000322679.10
ENST00000361921.8
ENST00000388876.3
ENST00000525044.5
ENST00000526329.1
ENST00000528946.5
ENST00000529589.5
ENST00000530084.5
ENST00000532493.5
ENST00000534069.5
ENST00000613679.4
ENST00000617230.2
CDS TCA 72 bp AATAAGCCTCTTGAACTGGTCAAATTTGAACATAAATaGAGGGGTACAACTTCCAAAATTCAGCACCAGTGG +
Preference number: 6 (lower is better)
Translates to: NKPLELVKFEHK*RGTTSKIQHQW
Trigger: CCACTGGTGCTGAATTTTGGAAGTTGTACCCCTTCATTTATGTTCAAATTTGACCAGTTCAAGAGGCTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613679.4
ENST00000617230.2
CDS CAA 90 bp ATGACAAGAAAATCTGCTATGGAACTAAAGTCTTCAATAAGCCTCTaGAACTGGTCAAATTTGAACATAAATGAAGGGGTACAACTTCCA +
Preference number: 6 (lower is better)
Translates to: MTRKSAMELKSSISL*NWSNLNINEGVQLP
Trigger: TGGAAGTTGTACCCCTTCATTTATGTTCAAATTTGACCAGTTCAAGAGGCTTATTGAAGACTTTAGTTCCATAGCAGATTTTCTTGTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613679.4
ENST00000617230.2