Pregenerated sensors for DINOL (Homo sapiens)
Ensembl gene IDs: ENSG00000285244Ensembl transcript IDs: ENST00000643333.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGTCCAGCGCACCAACGCAGGCGAGGGACTGGGGGAGGAGGGAAGTaGCCTCCTGCAGCACGCGAGGTTCCGGGACCGGCTGGCCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: CPAHQRRRGTGGGGK*PPAAREVPGPAGLL Trigger: CAGCAGGCCAGCCGGTCCCGGAACCTCGCGTGCTGCAGGAGGGCACTTCCCTCCTCCCCCAGTCCCTCGCCTGCGTTGGTGCGCTGGACA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643333.1 |
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| CDS CCA 90 bp | ACTTCGTGGGGAAATGTGTCCAGCGCACCAACGCAGGCGAGGGACTaGGGGAGGAGGGAAGTGCCCTCCTGCAGCACGCGAGGTTCCGGG | + |
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Preference number: 5 (lower is better) Translates to: TSWGNVSSAPTQARD*GRREVPSCSTRGSG Trigger: CCCGGAACCTCGCGTGCTGCAGGAGGGCACTTCCCTCCTCCCCCAGTCCCTCGCCTGCGTTGGTGCGCTGGACACATTTCCCCACGAAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643333.1 |
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| CDS TCA 90 bp | TGCTTTGTTGGGGTGTCTAGGTGCTCCAGGTGCTTCTGGGAGAGGTaGCCTAGTGAGGGATCAGTGGGAATAGAGGTGATATTGTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: CFVGVSRCSRCFWER*PSEGSVGIEVILWG Trigger: GCCCCACAATATCACCTCTATTCCCACTGATCCCTCACTAGGTCACCTCTCCCAGAAGCACCTGGAGCACCTAGACACCCCAACAAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643333.1 |
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| CDS GCA 90 bp | CAGACAACTCACTCGTCAAATCCTCCCCTTCCTGGCCAACAAAGCTaGTGCAACCACAGGGATTTCTTCTGTTCAGGTGAGTGTAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: QTTHSSNPPLPGQQS*CNHRDFFCSGECRV Trigger: CACCCTACACTCACCTGAACAGAAGAAATCCCTGTGGTTGCAGCAGCTTTGTTGGCCAGGAAGGGGAGGATTTGACGAGTGAGTTGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643333.1 |
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| CDS TCA 90 bp | GAGGCAAAAGTCCTGTGTTCCAACTATAGTCATTTCTTTGCTGCATaGTCTGAGTTAGGTCACCAGACTTCTCTGAGCCCCAGTTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: EAKVLCSNYSHFFAA*SELGHQTSLSPSFP Trigger: GGGGAAACTGGGGCTCAGAGAAGTCTGGTGACCTAACTCAGATCATGCAGCAAAGAAATGACTATAGTTGGAACACAGGACTTTTGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643333.1 |
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| CDS CCA 90 bp | CTCAATTTCCTCATCTGTGAAATAAACGGGACTGAAAAATCATTCTaGCCTCAAGATGCTTTGTTGGGGTGTCTAGGTGCTCCAGGTGCT | + |
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Preference number: 5 (lower is better) Translates to: LNFLICEINGTEKSF*PQDALLGCLGAPGA Trigger: AGCACCTGGAGCACCTAGACACCCCAACAAAGCATCTTGAGGCCAGAATGATTTTTCAGTCCCGTTTATTTCACAGATGAGGAAATTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643333.1 |
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| CDS TCA 72 bp | GGGGTGTCTAGGTGCTCCAGGTGCTTCTGGGAGAGGTaGCCTAGTGAGGGATCAGTGGGAATAGAGGTGATA | + |
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Preference number: 6 (lower is better) Translates to: GVSRCSRCFWER*PSEGSVGIEVI Trigger: TATCACCTCTATTCCCACTGATCCCTCACTAGGTCACCTCTCCCAGAAGCACCTGGAGCACCTAGACACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643333.1 |
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| CDS CCA 72 bp | GAGCCCCAGTTTCCCCAGCAGTGTATACGGGCTATGTaGGGAGTATTCAGGAGACAGACAACTCACTCGTCA | + |
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Preference number: 6 (lower is better) Translates to: EPQFPQQCIRAM*GVFRRQTTHSS Trigger: TGACGAGTGAGTTGTCTGTCTCCTGAATACTCCCCACATAGCCCGTATACACTGCTGGGGAAACTGGGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643333.1 |
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| CDS CAA 72 bp | GGGACTGAAAAATCATTCTGGCCTCAAGATGCTTTGTaGGGGTGTCTAGGTGCTCCAGGTGCTTCTGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: GTEKSFWPQDAL*GCLGAPGASGR Trigger: TCTCCCAGAAGCACCTGGAGCACCTAGACACCCCAACAAAGCATCTTGAGGCCAGAATGATTTTTCAGTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643333.1 |
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| CDS CAA 72 bp | AACGGGACTGAAAAATCATTCTGGCCTCAAGATGCTTaGTTGGGGTGTCTAGGTGCTCCAGGTGCTTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: NGTEKSFWPQDA*LGCLGAPGASG Trigger: CCCAGAAGCACCTGGAGCACCTAGACACCCCAACAAAGCATCTTGAGGCCAGAATGATTTTTCAGTCCCGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643333.1 |
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| CDS CAA 90 bp | GAAATAAACGGGACTGAAAAATCATTCTGGCCTCAAGATGCTTTGTaGGGGTGTCTAGGTGCTCCAGGTGCTTCTGGGAGAGGTGACCTA | + |
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Preference number: 6 (lower is better) Translates to: EINGTEKSFWPQDAL*GCLGAPGASGRGDL Trigger: TAGGTCACCTCTCCCAGAAGCACCTGGAGCACCTAGACACCCCAACAAAGCATCTTGAGGCCAGAATGATTTTTCAGTCCCGTTTATTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643333.1 |
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| CDS CAA 90 bp | TGTGAAATAAACGGGACTGAAAAATCATTCTGGCCTCAAGATGCTTaGTTGGGGTGTCTAGGTGCTCCAGGTGCTTCTGGGAGAGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: CEINGTEKSFWPQDA*LGCLGAPGASGRGD Trigger: GTCACCTCTCCCAGAAGCACCTGGAGCACCTAGACACCCCAACAAAGCATCTTGAGGCCAGAATGATTTTTCAGTCCCGTTTATTTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643333.1 |
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| CDS CAA 90 bp | CAATGTCCAATTCTTCTGTTTCCCTGGAGATCAGGTTGCCCTTTTTaGGTAGTCTCTCCAATTCCCTCCTTCCCGGAAGCATGTGACAAT | + |
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Preference number: 6 (lower is better) Translates to: QCPILLFPWRSGCPF*VVSPIPSFPEACDN Trigger: ATTGTCACATGCTTCCGGGAAGGAGGGAATTGGAGAGACTACCAAAAAAGGGCAACCTGATCTCCAGGGAAACAGAAGAATTGGACATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643333.1 |
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| CDS TCA 72 bp | GTCCTGTGTTCCAACTATAGTCATTTCTTTGCTGCATaGTCTGAGTTAGGTCACCAGACTTCTCTGAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: VLCSNYSHFFAA*SELGHQTSLSP Trigger: GGGGCTCAGAGAAGTCTGGTGACCTAACTCAGATCATGCAGCAAAGAAATGACTATAGTTGGAACACAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643333.1 |
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| CDS CCA 72 bp | CTCATCTGTGAAATAAACGGGACTGAAAAATCATTCTaGCCTCAAGATGCTTTGTTGGGGTGTCTAGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: LICEINGTEKSF*PQDALLGCLGA Trigger: AGCACCTAGACACCCCAACAAAGCATCTTGAGGCCAGAATGATTTTTCAGTCCCGTTTATTTCACAGATGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643333.1 |
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| CDS CAA 72 bp | TGTCATCTCCATAAACCATCTGCAAATGAGGGTTATTaGGCATTTTTGTCATTTTGGAGCCACAGAAATAAA | + |
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Preference number: 6 (lower is better) Translates to: CHLHKPSANEGY*AFLSFWSHRNK Trigger: TTTATTTCTGTGGCTCCAAAATGACAAAAATGCCAAATAACCCTCATTTGCAGATGGTTTATGGAGATGACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643333.1 |
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