RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DIDO1 (Homo sapiens)

Ensembl gene IDs: ENSG00000101191

Ensembl transcript IDs: ENST00000266070.8, ENST00000354665.8, ENST00000370366.1, ENST00000370368.5, ENST00000370371.8, ENST00000395340.5, ENST00000395343.6

Found 1759 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGTGTCCCCGTCAGGCGGCGTCGTGGCCTCAGCAAGTGCCTTGGTaGGCGAGTGTGACGTTCCCCCAGCTGGTCGCGGAGCTGACAGTG +
Preference number: 1 (lower is better)
Translates to: VCPRQAASWPQQVPW*ASVTFPQLVAELTV
Trigger: CACTGTCAGCTCCGCGACCAGCTGGGGGAACGTCACACTCGCCCACCAAGGCACTTGCTGAGGCCACGACGCCGCCTGACGGGGACACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 90 bp AGACTCCAGATACAAGCTACTAAGACTTCTCCCGTAGCCGCAGGGTaGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGC +
Preference number: 1 (lower is better)
Translates to: RLQIQATKTSPVAAG*TPAGHAHTGLRGGG
Trigger: GCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGTAGCTTGTATCTGGAGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
3UTR CCA 90 bp AGGGTGCGGCATGAGGGGTGTGGGTGGGAACACCCTGCACAGCTATaGCAGGAACACCCGCCGAGGCCTGGTGACAGGGACAGAGGGCAC +
Preference number: 1 (lower is better)
Translates to: RVRHEGCGWEHPAQL*QEHPPRPGDRDRGH
Trigger: GTGCCCTCTGTCCCTGTCACCAGGCCTCGGCGGGTGTTCCTGCCATAGCTGTGCAGGGTGTTCCCACCCACACCCCTCATGCCGCACCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 90 bp CCTACAGGACCCCAGCTAGCTAGGGTGCGGCATGAGGGGTGTGGGTaGGAACACCCTGCACAGCTATGGCAGGAACACCCGCCGAGGCCT +
Preference number: 1 (lower is better)
Translates to: PTGPQLARVRHEGCG*EHPAQLWQEHPPRP
Trigger: AGGCCTCGGCGGGTGTTCCTGCCATAGCTGTGCAGGGTGTTCCCACCCACACCCCTCATGCCGCACCCTAGCTAGCTGGGGTCCTGTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 90 bp TTTGTGTGTCCCCGTCAGGCGGCGTCGTGGCCTCAGCAAGTGCCTTaGTGGGCGAGTGTGACGTTCCCCCAGCTGGTCGCGGAGCTGACA +
Preference number: 1 (lower is better)
Translates to: FVCPRQAASWPQQVP*WASVTFPQLVAELT
Trigger: TGTCAGCTCCGCGACCAGCTGGGGGAACGTCACACTCGCCCACCAAGGCACTTGCTGAGGCCACGACGCCGCCTGACGGGGACACACAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR TCA 90 bp GGAACACCCTGCACAGCTATGGCAGGAACACCCGCCGAGGCCTGGTaGCAGGGACAGAGGGCACTGAGGCACAGGGTCCAGACAGCACCT +
Preference number: 1 (lower is better)
Translates to: GTPCTAMAGTPAEAW*QGQRALRHRVQTAP
Trigger: AGGTGCTGTCTGGACCCTGTGCCTCAGTGCCCTCTGTCCCTGTCACCAGGCCTCGGCGGGTGTTCCTGCCATAGCTGTGCAGGGTGTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR TCA 90 bp ACAGTGTGGGTGGTTGGTGCCATCGCACTCAGCAGACAAGGTGAGTaGCCCCAGCCCAGCCCTCCTTGTCCCGGTGCCATCCGGGAGGTG +
Preference number: 1 (lower is better)
Translates to: TVWVVGAIALSRQGE*PQPSPPCPGAIREV
Trigger: CACCTCCCGGATGGCACCGGGACAAGGAGGGCTGGGCTGGGGTCACTCACCTTGTCTGCTGAGTGCGATGGCACCAACCACCCACACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR GCA 90 bp AGACGGGCAGCTCAAGGCTGGGGCGCCAGGTCTCCTTCAGGCCTGTaGTGCATGTGCCGCAGAGAACTGAGGCTGTGGAATGGAGCTGGG +
Preference number: 1 (lower is better)
Translates to: RRAAQGWGARSPSGL*CMCRRELRLWNGAG
Trigger: CCCAGCTCCATTCCACAGCCTCAGTTCTCTGCGGCACATGCAGCACAGGCCTGAAGGAGACCTGGCGCCCCAGCCTTGAGCTGCCCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 90 bp ACCAAGGCTCCGAGGCCTGCGGCTTCACGCGGAAATGACGGGGGCTaGGCATGGTTAACAGGCAGGCATCTTGGCTGCGGTCCAGTCCTG +
Preference number: 1 (lower is better)
Translates to: TKAPRPAASRGNDGG*AWLTGRHLGCGPVL
Trigger: CAGGACTGGACCGCAGCCAAGATGCCTGCCTGTTAACCATGCCCAGCCCCCGTCATTTCCGCGTGAAGCCGCAGGCCTCGGAGCCTTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR TCA 90 bp GGCATTTCAGACCAAGGCTCCGAGGCCTGCGGCTTCACGCGGAAATaGCGGGGGCTGGGCATGGTTAACAGGCAGGCATCTTGGCTGCGG +
Preference number: 1 (lower is better)
Translates to: GISDQGSEACGFTRK*RGLGMVNRQASWLR
Trigger: CCGCAGCCAAGATGCCTGCCTGTTAACCATGCCCAGCCCCCGTCATTTCCGCGTGAAGCCGCAGGCCTCGGAGCCTTGGTCTGAAATGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR GCA 90 bp CCGGTGCCCGGCATGCGCCGGGGCTCGCTCAACACCCTACAACCGTaGTCACCTGACAGCTCCAAGTTTGGAGATGAGCAGGGAGAGAAG +
Preference number: 1 (lower is better)
Translates to: PVPGMRRGSLNTLQP*SPDSSKFGDEQGEK
Trigger: CTTCTCTCCCTGCTCATCTCCAAACTTGGAGCTGTCAGGTGAGCACGGTTGTAGGGTGTTGAGCGAGCCCCGGCGCATGCCGGGCACCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 90 bp GACTCCAAGCTGCGCAGCACACGCTCACCCCTGACCACAGCTCTGTaGAGTCACCACCATCAGCACCCTCAGGTGTGGCCTGTGCTGTCC +
Preference number: 1 (lower is better)
Translates to: DSKLRSTRSPLTTAL*SHHHQHPQVWPVLS
Trigger: GGACAGCACAGGCCACACCTGAGGGTGCTGATGGTGGTGACTCCACAGAGCTGTGGTCAGGGGTGAGCGTGTGCTGCGCAGCTTGGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 90 bp CCTGTGCTGCATGTGCCGCAGAGAACTGAGGCTGTGGAATGGAGCTaGGTCCTGCAGACCCTCACCCAGCACTTCTGGGGGCGTGACTCC +
Preference number: 1 (lower is better)
Translates to: PVLHVPQRTEAVEWS*VLQTLTQHFWGRDS
Trigger: GGAGTCACGCCCCCAGAAGTGCTGGGTGAGGGTCTGCAGGACCCAGCTCCATTCCACAGCCTCAGTTCTCTGCGGCACATGCAGCACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR TCA 90 bp ACTTCTGGGGGCGTGACTCCAAGCTGCGCAGCACACGCTCACCCCTaGCCACAGCTCTGTGGAGTCACCACCATCAGCACCCTCAGGTGT +
Preference number: 1 (lower is better)
Translates to: TSGGVTPSCAAHAHP*PQLCGVTTISTLRC
Trigger: ACACCTGAGGGTGCTGATGGTGGTGACTCCACAGAGCTGTGGTCAGGGGTGAGCGTGTGCTGCGCAGCTTGGAGTCACGCCCCCAGAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR GCA 90 bp TGCATGTGCCGCAGAGAACTGAGGCTGTGGAATGGAGCTGGGTCCTaGAGACCCTCACCCAGCACTTCTGGGGGCGTGACTCCAAGCTGC +
Preference number: 1 (lower is better)
Translates to: CMCRRELRLWNGAGS*RPSPSTSGGVTPSC
Trigger: GCAGCTTGGAGTCACGCCCCCAGAAGTGCTGGGTGAGGGTCTGCAGGACCCAGCTCCATTCCACAGCCTCAGTTCTCTGCGGCACATGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 90 bp TTCAGGCCTGTGCTGCATGTGCCGCAGAGAACTGAGGCTGTGGAATaGAGCTGGGTCCTGCAGACCCTCACCCAGCACTTCTGGGGGCGT +
Preference number: 1 (lower is better)
Translates to: FRPVLHVPQRTEAVE*SWVLQTLTQHFWGR
Trigger: ACGCCCCCAGAAGTGCTGGGTGAGGGTCTGCAGGACCCAGCTCCATTCCACAGCCTCAGTTCTCTGCGGCACATGCAGCACAGGCCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 90 bp ACCTCCAGGAGGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTaGCCAGAGCTCTTCACAAGCAACACCAAGAACCTCTACCAGGGT +
Preference number: 1 (lower is better)
Translates to: TSRRAGLFLSLVTWS*PELFTSNTKNLYQG
Trigger: ACCCTGGTAGAGGTTCTTGGTGTTGCTTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCCTCCTGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR TCA 90 bp TGCTGCAGTGTCTGCACTGAGTGCACACACTGTCGCACTTGCAACTaGCCAGTGGGTCTTCACAGGTGCGGAGAGGCCAGCTTCTCGGTC +
Preference number: 1 (lower is better)
Translates to: CCSVCTECTHCRTCN*PVGLHRCGEASFSV
Trigger: GACCGAGAAGCTGGCCTCTCCGCACCTGTGAAGACCCACTGGTCAGTTGCAAGTGCGACAGTGTGTGCACTCAGTGCAGACACTGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR TCA 90 bp GCTGTCCAAGGGCTTCTGGGCTATCTCCGTGAGGACAGGGTCCGCTaGGACAGGGGAAACATGCCAGGACCTAGCCTTACACACACACAC +
Preference number: 1 (lower is better)
Translates to: AVQGLLGYLREDRVR*DRGNMPGPSLTHTH
Trigger: GTGTGTGTGTGTAAGGCTAGGTCCTGGCATGTTTCCCCTGTCTCAGCGGACCCTGTCCTCACGGAGATAGCCCAGAAGCCCTTGGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR GCA 90 bp TGCAAGGACAAATGTCCTCAGGGAGATCCAGCTACTGCTGTGAACTaGATGGCTCCTGAGGGTGCTGCGGGGGCAGCTCCACTCTCACTG +
Preference number: 1 (lower is better)
Translates to: CKDKCPQGDPATAVN*MAPEGAAGAAPLSL
Trigger: CAGTGAGAGTGGAGCTGCCCCCGCAGCACCCTCAGGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTGAGGACATTTGTCCTTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR TCA 90 bp CGACAAGGGCCAAGTGCTGACAGGGCGGGTGACTTAAGTTTCCCCTaGGGGCACAGCTGGGCACCTTCAGGCCTTCACTTGCTTAAGTGT +
Preference number: 1 (lower is better)
Translates to: RQGPSADRAGDLSFP*GHSWAPSGLHLLKC
Trigger: ACACTTAAGCAAGTGAAGGCCTGAAGGTGCCCAGCTGTGCCCTCAGGGGAAACTTAAGTCACCCGCCCTGTCAGCACTTGGCCCTTGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR GCA 90 bp TGCCACAGTCCTACGCCCTCAAAGATGAATCCTATTGCTAACCGCTaGGTCTGTGCTCCTAACTCCTGCTCCCAGAGAGCCCTGGGCTGG +
Preference number: 1 (lower is better)
Translates to: CHSPTPSKMNPIANR*VCAPNSCSQRALGW
Trigger: CCAGCCCAGGGCTCTCTGGGAGCAGGAGTTAGGAGCACAGACGCAGCGGTTAGCAATAGGATTCATCTTTGAGGGCGTAGGACTGTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 90 bp GTGTCTGCACTGAGTGCACACACTGTCGCACTTGCAACTGACCAGTaGGTCTTCACAGGTGCGGAGAGGCCAGCTTCTCGGTCTTCACCT +
Preference number: 1 (lower is better)
Translates to: VSALSAHTVALATDQ*VFTGAERPASRSSP
Trigger: AGGTGAAGACCGAGAAGCTGGCCTCTCCGCACCTGTGAAGACCCACTGGTCAGTTGCAAGTGCGACAGTGTGTGCACTCAGTGCAGACAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 90 bp TACTTTACCCAGACGCCTCTGCTCTTTATCGTGGATCAAAGTCCCTaGGGCTTTTGTGTGTCCCCGTCAGGCGGCGTCGTGGCCTCAGCA +
Preference number: 1 (lower is better)
Translates to: YFTQTPLLFIVDQSP*GFCVSPSGGVVASA
Trigger: TGCTGAGGCCACGACGCCGCCTGACGGGGACACACAAAAGCCCCAGGGACTTTGATCCACGATAAAGAGCAGAGGCGTCTGGGTAAAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR TCA 90 bp GCTGCGGTCCAGTCCTGTAAGGGCCCTGCACAGAACCCTACACGATaGGCTTTCAACCTGACTCATCTCCCTTCCATGAACAAGGCCCTG +
Preference number: 1 (lower is better)
Translates to: AAVQSCKGPAQNPTR*AFNLTHLPSMNKAL
Trigger: CAGGGCCTTGTTCATGGAAGGGAGATGAGTCAGGTTGAAAGCTCATCGTGTAGGGTTCTGTGCAGGGCCCTTACAGGACTGGACCGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR GCA 90 bp GTGACAGGGACAGAGGGCACTGAGGCACAGGGTCCAGACAGCACCTaGCTTTATGACGAAGCACTTCAGAGGACACTGTGTGATCCACAC +
Preference number: 1 (lower is better)
Translates to: VTGTEGTEAQGPDST*LYDEALQRTLCDPH
Trigger: GTGTGGATCACACAGTGTCCTCTGAAGTGCTTCGTCATAAAGGCAGGTGCTGTCTGGACCCTGTGCCTCAGTGCCCTCTGTCCCTGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 90 bp GCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTaGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGA +
Preference number: 1 (lower is better)
Translates to: AYTALLSEQLMCRQG*MWRAGQCGYAIRLG
Trigger: TCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR CCA 90 bp CTCCTGCCCTGTACTTGGGGAGAACAGACTGTGCACCCATGTTTATaGACCGAGGTTACTCCACAGGCATTTCAGACCAAGGCTCCGAGG +
Preference number: 1 (lower is better)
Translates to: LLPCTWGEQTVHPCL*TEVTPQAFQTKAPR
Trigger: CCTCGGAGCCTTGGTCTGAAATGCCTGTGGAGTAACCTCGGTCCATAAACATGGGTGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR GCA 90 bp GGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTaGAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCA +
Preference number: 1 (lower is better)
Translates to: GKTEAYTALLSEQLM*RQGWMWRAGQCGYA
Trigger: TGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR GCA 90 bp GTAAAGAAAAAGTGCTCTTTCCACCCCGGTAGGGAGGTGCTGAGGTaGTGCAGTGTCTGCACTGAGTGCACACACTGTCGCACTTGCAAC +
Preference number: 1 (lower is better)
Translates to: VKKKCSFHPGREVLR*CSVCTECTHCRTCN
Trigger: GTTGCAAGTGCGACAGTGTGTGCACTCAGTGCAGACACTGCAGCACCTCAGCACCTCCCTACCGGGGTGGAAAGAGCACTTTTTCTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR GCA 90 bp GAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTaGACCCATGTTTATGGACCGAGGTTACTCCACAGGCATTTCAGA +
Preference number: 1 (lower is better)
Translates to: EGGVSSCPVLGENRL*THVYGPRLLHRHFR
Trigger: TCTGAAATGCCTGTGGAGTAACCTCGGTCCATAAACATGGGTGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR GCA 90 bp AGAGCCCTTTCCATTCGAGCAGCTACAGAGGGCGGTGTTTCCTCCTaGCCTGTACTTGGGGAGAACAGACTGTGCACCCATGTTTATGGA +
Preference number: 1 (lower is better)
Translates to: RALSIRAATEGGVSS*PVLGENRLCTHVYG
Trigger: TCCATAAACATGGGTGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCTCGAATGGAAAGGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 90 bp CATTCGAGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTaGGGAGAACAGACTGTGCACCCATGTTTATGGACCGAGGTTACT +
Preference number: 1 (lower is better)
Translates to: HSSSYRGRCFLLPCT*GEQTVHPCLWTEVT
Trigger: AGTAACCTCGGTCCATAAACATGGGTGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCTCGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR GCA 90 bp GCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTaGCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATA +
Preference number: 1 (lower is better)
Translates to: AVVRTTHVQTGVDVA*RAVWLCNQTGMKRI
Trigger: TATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR GCA 90 bp AGAAAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTaGGGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGG +
Preference number: 1 (lower is better)
Translates to: RKPVTCRIPSPRHAS*GQDSVLGVNSLTVG
Trigger: CCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
3UTR GCA 90 bp GGAAACATGCCAGGACCTAGCCTTACACACACACACGCGCGCACATaGACACGCACTACACATTTACACCACAAAGCCAGGACACACATG +
Preference number: 1 (lower is better)
Translates to: GNMPGPSLTHTHART*TRTTHLHHKARTHM
Trigger: CATGTGTGTCCTGGCTTTGTGGTGTAAATGTGTAGTGCGTGTGCATGTGCGCGCGTGTGTGTGTGTAAGGCTAGGTCCTGGCATGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 90 bp ACACTGTGTGATCCACACACCCGCTTTGAGAGAACACCAATCCTCTaGGGACTGCATGGCCACGGAGACACTTCAGTTGGGCATCAGATA +
Preference number: 1 (lower is better)
Translates to: TLCDPHTRFERTPIL*GLHGHGDTSVGHQI
Trigger: TATCTGATGCCCAACTGAAGTGTCTCCGTGGCCATGCAGTCCCCAGAGGATTGGTGTTCTCTCAAAGCGGGTGTGTGGATCACACAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 90 bp ACACCACGCTGTCAAAACCCACTAGGTCCCCATGTGTGGGAGGCATaGACACCTGCAATTGTGTGGTATAAACTGAGGCACATGGACGAG +
Preference number: 1 (lower is better)
Translates to: TPRCQNPLGPHVWEA*TPAIVWYKLRHMDE
Trigger: CTCGTCCATGTGCCTCAGTTTATACCACACAATTGCAGGTGTCCATGCCTCCCACACATGGGGACCTAGTGGGTTTTGACAGCGTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 90 bp AGGGGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTaGGATGAAGAGAATACGAATACTTACCAGAGCCTGAGAGTGAAA +
Preference number: 1 (lower is better)
Translates to: RGGCGVPGSVAMQSD*DEENTNTYQSLRVK
Trigger: TTTCACTCTCAGGCTCTGGTAAGTATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR CCA 90 bp ACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTaGCTATGCAATCAGACTGGGATGAAGAGAATACGAATACTTACC +
Preference number: 1 (lower is better)
Translates to: TTHVQTGVDVACRAV*LCNQTGMKRIRILT
Trigger: GGTAAGTATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR CCA 90 bp CCACTAGGTCCCCATGTGTGGGAGGCATGGACACCTGCAATTGTGTaGTATAAACTGAGGCACATGGACGAGTCAGTCACTCTTTTCTGC +
Preference number: 1 (lower is better)
Translates to: PLGPHVWEAWTPAIV*YKLRHMDESVTLFC
Trigger: GCAGAAAAGAGTGACTGACTCGTCCATGTGCCTCAGTTTATACCACACAATTGCAGGTGTCCATGCCTCCCACACATGGGGACCTAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR TCA 90 bp GTCATTATTGTTAAGTCTCCTGGAAATCCATCCCTGTTAGAGAAGTaGTCCCTGATGGAGCCACTTCCCGGTGTGTGCTGGCTCCCGAGT +
Preference number: 1 (lower is better)
Translates to: VIIVKSPGNPSLLEK*SLMEPLPGVCWLPS
Trigger: ACTCGGGAGCCAGCACACACCGGGAAGTGGCTCCATCAGGGATCACTTCTCTAACAGGGATGGATTTCCAGGAGACTTAACAATAATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR TCA 90 bp CGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATaGGATGTCAGTGAAGGTATGGCTCTAGGGTCCAACGAAACTCCC +
Preference number: 1 (lower is better)
Translates to: RRLRPVKAAFGNTNG*DVSEGMALGSNETP
Trigger: GGGAGTTTCGTTGGACCCTAGAGCCATACCTTCACTGACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
3UTR TCA 90 bp TGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATaGAGAGAATACGAATACTTACCAGAGCCTGAGAGTGAAAACAGA +
Preference number: 1 (lower is better)
Translates to: WMWRAGQCGYAIRLG*REYEYLPEPESENR
Trigger: TCTGTTTTCACTCTCAGGCTCTGGTAAGTATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR TCA 90 bp AGAAGTGATGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTaGAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACA +
Preference number: 1 (lower is better)
Translates to: RSDAFMCWPWTMWKN*SVYSAVVRTTHVQT
Trigger: TGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCATCACTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
3UTR GCA 90 bp AACTCTCCTAAGACAATTTATGCTGTGAATCAGGGGTACTTCTCGTaGCACAGTCCTACGCCCTCAAAGATGAATCCTATTGCTAACCGC +
Preference number: 1 (lower is better)
Translates to: NSPKTIYAVNQGYFS*HSPTPSKMNPIANR
Trigger: GCGGTTAGCAATAGGATTCATCTTTGAGGGCGTAGGACTGTGGCACGAGAAGTACCCCTGATTCACAGCATAAATTGTCTTAGGAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 90 bp GCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTaGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCT +
Preference number: 1 (lower is better)
Translates to: AYFSRDTEELLRRRN*TNKTPDYSNQGLLP
Trigger: AGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
3UTR TCA 90 bp TACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACAAAACTCCTaGTTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTT +
Preference number: 1 (lower is better)
Translates to: YRRTAQKAKLDQQNS*LFKSRTPPCPQSTL
Trigger: AAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
3UTR GCA 90 bp AGTGTATGGAAAGGTTTCACTAGCTGTTACTTTTCTAAAGTCCCTTaGCCTGTGTTACTTTACCCAGACGCCTCTGCTCTTTATCGTGGA +
Preference number: 1 (lower is better)
Translates to: SVWKGFTSCYFSKVP*PVLLYPDASALYRG
Trigger: TCCACGATAAAGAGCAGAGGCGTCTGGGTAAAGTAACACAGGGCAAGGGACTTTAGAAAAGTAACAGCTAGTGAAACCTTTCCATACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp GCCTCCCTGGGCCCCGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATGCGCCCGCCGAGGCCTGGTaGCAGGGACAGAGGGCACTG +
Preference number: 2 (lower is better)
Translates to: ASLGPVTAQCGEPGARHAPAEAW*QGQRAL
Trigger: CAGTGCCCTCTGTCCCTGTCACCAGGCCTCGGCGGG...CGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAGGGAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp CTGGGCCCCGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATGCGCCGGGGGCCCAAGATGTGGAGTaGCCCCTACAGGACCCCAGC +
Preference number: 2 (lower is better)
Translates to: LGPVTAQCGEPGARHAPGAQDVE*PLQDPS
Trigger: GCTGGGGTCCTGTAGGGGCCACTCCACATCTTGGGC...CCCCGGCGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp GCCTCCCTGGGCCCCGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATGCGGACCTGAGGCCAAGATaGGCTGGTTGCAGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: ASLGPVTAQCGEPGARHADLRPR*AGCRLW
Trigger: CCACAGCCTGCAACCAGCTCATCTTGGCCTCAGGTC...CGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAGGGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp GCCTCCCTGGGCCCCGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATGCGGCACTGAGTCTTCTCTaGCCTGAGGCCAAGATGAGC +
Preference number: 2 (lower is better)
Translates to: ASLGPVTAQCGEPGARHAALSLL*PEAKMS
Trigger: GCTCATCTTGGCCTCAGGTCAGAGAAGACTCAGTGC...CGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAGGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp GCCTCCCTGGGCCCCGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATGCGAACACAGGCATAGGCTaGGCCCACTCCAGCTGTGAA +
Preference number: 2 (lower is better)
Translates to: ASLGPVTAQCGEPGARHANTGIG*AHSSCE
Trigger: TTCACAGCTGGAGTGGGCTCAGCCTATGCCTGTGTT...CGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAGGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp GTGGGCGAGTGTGACGTTCCCCCAGCTGGTCGCGGAGCTGACAGTGTGGGTGGTCACCCTGCACAGCTATaGCAGGAACACCCGCCGAGG +
Preference number: 2 (lower is better)
Translates to: VGECDVPPAGRGADSVGGHPAQL*QEHPPR
Trigger: CCTCGGCGGGTGTTCCTGCCATAGCTGTGCAGGGTG...ACCACCCACACTGTCAGCTCCGCGACCAGCTGGGGGAACGTCACACTCGCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp CAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTGAGGGTGCTGCGGGGCGGGCAGCTCAAGGCTaGGGCGCCAGGTCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: QGDPATAVNCMAPEGAAGRAAQG*GARSPS
Trigger: TGAAGGAGACCTGGCGCCCCAGCCTTGAGCTGCCCG...CCCCGCAGCACCCTCAGGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR GCA 90 bp GTGGGCGAGTGTGACGTTCCCCCAGCTGGTCGCGGAGCTGACAGTGTGGGTGGTAGGGAGGTGCTGAGGTaGTGCAGTGTCTGCACTGAG +
Preference number: 2 (lower is better)
Translates to: VGECDVPPAGRGADSVGGREVLR*CSVCTE
Trigger: CTCAGTGCAGACACTGCAGCACCTCAGCACCTCCCT...ACCACCCACACTGTCAGCTCCGCGACCAGCTGGGGGAACGTCACACTCGCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR GCA 90 bp CTGTCCAAGGGCTTCTGGGCTATCTCCGTGAGGACAGGGTCCGCTGAGACAGGGTGTGCTCCTAACTCCTaGTCCCAGAGAGCCCTGGGC +
Preference number: 2 (lower is better)
Translates to: LSKGFWAISVRTGSAETGCAPNS*SQRALG
Trigger: GCCCAGGGCTCTCTGGGAGCAGGAGTTAGGAGCACA...CCCTGTCTCAGCGGACCCTGTCCTCACGGAGATAGCCCAGAAGCCCTTGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR GCA 90 bp ACCCAGACGCCTCTGCTCTTTATCGTGGATCAAAGTCCCTGGGGCTTTTGTGTGGTGTGGGGAACCCGGTaGCCGGCATGCGCCGGGGCT +
Preference number: 2 (lower is better)
Translates to: TQTPLLFIVDQSPWGFCVVWGTR*PACAGA
Trigger: AGCCCCGGCGCATGCCGGGCACCGGGTTCCCCACAC...CACACAAAAGCCCCAGGGACTTTGATCCACGATAAAGAGCAGAGGCGTCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR GCA 90 bp GTTTCCCCTGAGGGCACAGCTGGGCACCTTCAGGCCTTCACTTGCTTAAGTGTGCCCTCCTTGTCCCGGTaGCATCCGGGAGGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: VSPEGTAGHLQAFTCLSVPSLSR*HPGGAG
Trigger: CCCAGCACCTCCCGGATGGCACCGGGACAAGGAGGG...CACACTTAAGCAAGTGAAGGCCTGAAGGTGCCCAGCTGTGCCCTCAGGGGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp GCCAAGTCAAGTAATCAGTACGTGAAGCGGGCCGAGTACCCGATGGCCTGGCCCGTCCCGCCCAAGATGTaGAGTGGCCCCTACAGGACC +
Preference number: 2 (lower is better)
Translates to: AKSSNQYVKRAEYPMAWPVPPKM*SGPYRT
Trigger: GGTCCTGTAGGGGCCACTCCACATCTTGGGCGGGAC...GGGCCAGGCCATCGGGTACTCGGCCCGCTTCACGTACTGATTACTTGACTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp CAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTGAGGGTGCTGCGGGGTTGCTGTGGGGAGAATaGAGGCGCCGCTCCTCTGGT +
Preference number: 2 (lower is better)
Translates to: QGDPATAVNCMAPEGAAGLLWGE*RRRSSG
Trigger: ACCAGAGGAGCGGCGCCTCCATTCTCCCCACAGCAA...CCCCGCAGCACCCTCAGGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp CTGTCCAAGGGCTTCTGGGCTATCTCCGTGAGGACAGGGTCCGCTGAGACAGGGCAGCAAGTGCCTTGGTaGGCGAGTGTGACGTTCCCC +
Preference number: 2 (lower is better)
Translates to: LSKGFWAISVRTGSAETGQQVPW*ASVTFP
Trigger: GGGGAACGTCACACTCGCCCACCAAGGCACTTGCTG...CCCTGTCTCAGCGGACCCTGTCCTCACGGAGATAGCCCAGAAGCCCTTGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp AGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTCTTGGTGGGCGAGTGTaGCGTTCCCCCAGCTGGTCG +
Preference number: 2 (lower is better)
Translates to: SSYRGRCFLLPCTWGEQTLGGRV*RSPSWS
Trigger: CGACCAGCTGGGGGAACGTCACACTCGCCCACCAAG...AGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp AGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGCACTTCTGGGGGCGTaGCTCCAAGCTGCGCAGCAC +
Preference number: 2 (lower is better)
Translates to: SSYRGRCFLLPCTWGEQTALLGA*LQAAQH
Trigger: GTGCTGCGCAGCTTGGAGTCACGCCCCCAGAAGTGC...AGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR GCA 90 bp ACCCAGACGCCTCTGCTCTTTATCGTGGATCAAAGTCCCTGGGGCTTTTGTGTGCCTGGGCCCCGTCACTaGCCAGTGTGGGGAACCCGG +
Preference number: 2 (lower is better)
Translates to: TQTPLLFIVDQSPWGFCVPGPRH*PVWGTR
Trigger: CCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAGG...CACACAAAAGCCCCAGGGACTTTGATCCACGATAAAGAGCAGAGGCGTCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp CTGTCCAAGGGCTTCTGGGCTATCTCCGTGAGGACAGGGTCCGCTGAGACAGGGAGAGCACGTGGCCCCTaGAATCACCCTCAACCCTTG +
Preference number: 2 (lower is better)
Translates to: LSKGFWAISVRTGSAETGRARGP*NHPQPL
Trigger: CAAGGGTTGAGGGTGATTCCAGGGGCCACGTGCTCT...CCCTGTCTCAGCGGACCCTGTCCTCACGGAGATAGCCCAGAAGCCCTTGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp AGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTAGCCAGCCCTTGCTGTaGGGAGAATGGAGGCGCCGC +
Preference number: 2 (lower is better)
Translates to: SSYRGRCFLLPCTWGEQTSQPLL*GEWRRR
Trigger: GCGGCGCCTCCATTCTCCCCACAGCAAGGGCTGGCT...AGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CAA 90 bp CCAGACGCCTCTGCTCTTTATCGTGGATCAAAGTCCCTGGGGCTTTaGTGTGTCCCCGTCAGGCGGCGTCGTGGCCTCAGCAAGTGCCTT +
Preference number: 2 (lower is better)
Translates to: PDASALYRGSKSLGL*CVPVRRRRGLSKCL
Trigger: AAGGCACTTGCTGAGGCCACGACGCCGCCTGACGGGGACACACAAAAGCCCCAGGGACTTTGATCCACGATAAAGAGCAGAGGCGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp GTTTCCCCTGAGGGCACAGCTGGGCACCTTCAGGCCTTCACTTGCTTAAGTGTGGCACACGCTCACCCCTaGCCACAGCTCTGTGGAGTC +
Preference number: 2 (lower is better)
Translates to: VSPEGTAGHLQAFTCLSVAHAHP*PQLCGV
Trigger: GACTCCACAGAGCTGTGGTCAGGGGTGAGCGTGTGC...CACACTTAAGCAAGTGAAGGCCTGAAGGTGCCCAGCTGTGCCCTCAGGGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR GCA 90 bp GACAGGGGAAACATGCCAGGACCTAGCCTTACACACACACACGCGCGCACATGCGTGCCATCCGGGAGGTaGTGGGAGACCTGTCCTTTC +
Preference number: 2 (lower is better)
Translates to: DRGNMPGPSLTHTHARTCVPSGR*WETCPF
Trigger: GAAAGGACAGGTCTCCCAGCACCTCCCGGATGGCAC...GCATGTGCGCGCGTGTGTGTGTGTAAGGCTAGGTCCTGGCATGTTTCCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp GCGTCCTGCGGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTCAGCAGGAGGCATCCTaGACATGGGCTCTGCTTCCC +
Preference number: 2 (lower is better)
Translates to: ASCGQDSVLGVNSLTVGPQQEAS*TWALLP
Trigger: GGGAAGCAGAGCCCATGTCCAGGATGCCTCCTGCTG...AGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACCGCAGGACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR CCA 90 bp GTGGGCGAGTGTGACGTTCCCCCAGCTGGTCGCGGAGCTGACAGTGTGGGTGGTCGGAGACACTTCAGTTaGGCATCAGATACTAACCCC +
Preference number: 2 (lower is better)
Translates to: VGECDVPPAGRGADSVGGRRHFS*ASDTNP
Trigger: GGGGTTAGTATCTGATGCCCAACTGAAGTGTCTCCG...ACCACCCACACTGTCAGCTCCGCGACCAGCTGGGGGAACGTCACACTCGCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp GCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGAGTGACAGGAAGTCCTaGCAGACTAGGGATGGACAC +
Preference number: 2 (lower is better)
Translates to: ADRGGCGVPGSVAMQSDWSDRKS*QTRDGH
Trigger: GTGTCCATCCCTAGTCTGTCAGGACTTCCTGTCACT...CCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR TCA 90 bp GACAGGGGAAACATGCCAGGACCTAGCCTTACACACACACACGCGCGCACATGCTGGGCTTCTGGGCACTaGGTCTTCTCTGACCTGAGG +
Preference number: 2 (lower is better)
Translates to: DRGNMPGPSLTHTHARTCWASGH*VFSDLR
Trigger: CCTCAGGTCAGAGAAGACTCAGTGCCCAGAAGCCCA...GCATGTGCGCGCGTGTGTGTGTGTAAGGCTAGGTCCTGGCATGTTTCCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp CTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTGCAACCTCCCTTTCTGGCTaGGCCTTGGGCTTCTGGGCA +
Preference number: 2 (lower is better)
Translates to: LQRAVFPPALYLGRTDCATSLSG*ALGFWA
Trigger: TGCCCAGAAGCCCAAGGCTCAGCCAGAAAGGGAGGT...TGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp AGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTCCCACATCAGTGCCCTaGTGCAGACGGGCAGCTCAA +
Preference number: 2 (lower is better)
Translates to: SSYRGRCFLLPCTWGEQTPTSVP*CRRAAQ
Trigger: TTGAGCTGCCCGTCTGCATCAGGGCACTGATGTGGG...AGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR GCA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAATACCAGGGTCCTTTCTaGCACCCATTAGGTGGCATC +
Preference number: 2 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQYQGPF*HPLGGI
Trigger: GATGCCACCTAATGGGTGGCAGAAAGGACCCTGGTA...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACACCCGTAGCCGCAGGGTaGACGCCTGCAGGTCACGCC +
Preference number: 2 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTPVAAG*TPAGHA
Trigger: GGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGG...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
3UTR-3UTR CCA 90 bp GGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGAGACAGGGGTGGATGTaGCGTGCCGGGCAGTGTGGC +
Preference number: 2 (lower is better)
Translates to: GQDSVLGVNSLTVGPMKQRQGWM*RAGQCG
Trigger: GCCACACTGCCCGGCACGCCACATCCACCCCTGTCT...CTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR CCA 90 bp GTGGGCGAGTGTGACGTTCCCCCAGCTGGTCGCGGAGCTGACAGTGTGGGTGGTGCTGGTTGCAGGCTGTaGGTTTTTCCCTCTCTAAAA +
Preference number: 2 (lower is better)
Translates to: VGECDVPPAGRGADSVGGAGCRL*VFPSLK
Trigger: TTTTAGAGAGGGAAAAACCCACAGCCTGCAACCAGC...ACCACCCACACTGTCAGCTCCGCGACCAGCTGGGGGAACGTCACACTCGCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp CAAGGACAAATGTCCTCAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCAACGTGGGCTGTGCCTaGGGCGACAGAAGTCCCGCC +
Preference number: 2 (lower is better)
Translates to: QGQMSSGRSSYCCELHGSNVGCA*GDRSPA
Trigger: GGCGGGACTTCTGTCGCCCCAGGCACAGCCCACGTT...GGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTGAGGACATTTGTCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp CAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTGAGGGTGCTGCGGGGTCCAGCTGTGAAGAATaGGCTCCAGTAGGAACGTGG +
Preference number: 2 (lower is better)
Translates to: QGDPATAVNCMAPEGAAGSSCEE*APVGTW
Trigger: CCACGTTCCTACTGGAGCCCATTCTTCACAGCTGGA...CCCCGCAGCACCCTCAGGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp GTTTCCCCTGAGGGCACAGCTGGGCACCTTCAGGCCTTCACTTGCTTAAGTGTGGGCTTTTCCTCTCCCTaGTCACGTGGAGCTGGCCAG +
Preference number: 2 (lower is better)
Translates to: VSPEGTAGHLQAFTCLSVGFSSP*SRGAGQ
Trigger: CTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCC...CACACTTAAGCAAGTGAAGGCCTGAAGGTGCCCAGCTGTGCCCTCAGGGGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp GACAGGGGAAACATGCCAGGACCTAGCCTTACACACACACACGCGCGCACATGCGACAGTGTGGGTGGTTaGTGCCATCGCACTCAGCAG +
Preference number: 2 (lower is better)
Translates to: DRGNMPGPSLTHTHARTCDSVGG*CHRTQQ
Trigger: CTGCTGAGTGCGATGGCACCAACCACCCACACTGTC...GCATGTGCGCGCGTGTGTGTGTGTAAGGCTAGGTCCTGGCATGTTTCCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp GTGCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTAGTGACAGGAAGTCCTaGCAGACTAGGGATGGACAC +
Preference number: 2 (lower is better)
Translates to: VQTGVDVACRAVWLCNQTSDRKS*QTRDGH
Trigger: GTGTCCATCCCTAGTCTGTCAGGACTTCCTGTCACT...AGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR TCA 90 bp CTGTCCAAGGGCTTCTGGGCTATCTCCGTGAGGACAGGGTCCGCTGAGACAGGGGACCATGGAAGTGTGTaGGATTTCACGCACACGCAT +
Preference number: 2 (lower is better)
Translates to: LSKGFWAISVRTGSAETGDHGSV*DFTHTH
Trigger: ATGCGTGTGCGTGAAATCTCACACACTTCCATGGTC...CCCTGTCTCAGCGGACCCTGTCCTCACGGAGATAGCCCAGAAGCCCTTGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR GCA 90 bp CTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTGCACAGGGGTACTTCTCGTaGCACAGTCCTACGCCCTCA +
Preference number: 2 (lower is better)
Translates to: LQRAVFPPALYLGRTDCAQGYFS*HSPTPS
Trigger: TGAGGGCGTAGGACTGTGGCACGAGAAGTACCCCTG...TGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR GCA 90 bp GACAGGGGAAACATGCCAGGACCTAGCCTTACACACACACACGCGCGCACATGCCAATCCTCTGGGGACTaGATGGCCACGGAGACACTT +
Preference number: 2 (lower is better)
Translates to: DRGNMPGPSLTHTHARTCQSSGD*MATETL
Trigger: AAGTGTCTCCGTGGCCATGCAGTCCCCAGAGGATTG...GCATGTGCGCGCGTGTGTGTGTGTAAGGCTAGGTCCTGGCATGTTTCCCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR GCA 90 bp AGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGAGGTGCTGAGGTGCTaGAGTGTCTGCACTGAGTGC +
Preference number: 2 (lower is better)
Translates to: SSYRGRCFLLPCTWGEQTEVLRC*SVCTEC
Trigger: GCACTCAGTGCAGACACTGCAGCACCTCAGCACCTC...AGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp TCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAAGACAGGGGTGGATGTaGCGTGCCGGGCAGTGTGGC +
Preference number: 2 (lower is better)
Translates to: SGQCSRCELTYRGAYEAGRQGWM*RAGQCG
Trigger: GCCACACTGCCCGGCACGCCACATCCACCCCTGTCT...TCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR CCA 90 bp AGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTCCTCTGGGGACTGCATaGCCACGGAGACACTTCAGT +
Preference number: 2 (lower is better)
Translates to: SSYRGRCFLLPCTWGEQTPLGTA*PRRHFS
Trigger: ACTGAAGTGTCTCCGTGGCCATGCAGTCCCCAGAGG...AGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp CAAGGACAAATGTCCTCAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCGCTCCAGTAGGAACGTaGGCTGTGCCTGGGGCGACA +
Preference number: 2 (lower is better)
Translates to: QGQMSSGRSSYCCELHGSAPVGT*AVPGAT
Trigger: TGTCGCCCCAGGCACAGCCCACGTTCCTACTGGAGC...GGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTGAGGACATTTGTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp GTTTCCCCTGAGGGCACAGCTGGGCACCTTCAGGCCTTCACTTGCTTAAGTGTGCTGGTCACGTGGAGCTaGCCAGAGCTCTTCACAAGC +
Preference number: 2 (lower is better)
Translates to: VSPEGTAGHLQAFTCLSVLVTWS*PELFTS
Trigger: GCTTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAG...CACACTTAAGCAAGTGAAGGCCTGAAGGTGCCCAGCTGTGCCCTCAGGGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp GTTTCCCCTGAGGGCACAGCTGGGCACCTTCAGGCCTTCACTTGCTTAAGTGTGCCTCAGCAAGTGCCTTaGTGGGCGAGTGTGACGTTC +
Preference number: 2 (lower is better)
Translates to: VSPEGTAGHLQAFTCLSVPQQVP*WASVTF
Trigger: GAACGTCACACTCGCCCACCAAGGCACTTGCTGAGG...CACACTTAAGCAAGTGAAGGCCTGAAGGTGCCCAGCTGTGCCCTCAGGGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp GTTTCCCCTGAGGGCACAGCTGGGCACCTTCAGGCCTTCACTTGCTTAAGTGTGCTAGGTCCCCATGTGTaGGAGGCATGGACACCTGCA +
Preference number: 2 (lower is better)
Translates to: VSPEGTAGHLQAFTCLSVLGPHV*EAWTPA
Trigger: TGCAGGTGTCCATGCCTCCCACACATGGGGACCTAG...CACACTTAAGCAAGTGAAGGCCTGAAGGTGCCCAGCTGTGCCCTCAGGGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp GACAGGGGAAACATGCCAGGACCTAGCCTTACACACACACACGCGCGCACATGCCAGCACCTGCCTTTATaGCGAAGCACTTCAGAGGAC +
Preference number: 2 (lower is better)
Translates to: DRGNMPGPSLTHTHARTCQHLPL*RSTSED
Trigger: GTCCTCTGAAGTGCTTCGTCATAAAGGCAGGTGCTG...GCATGTGCGCGCGTGTGTGTGTGTAAGGCTAGGTCCTGGCATGTTTCCCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp AAGACCTCAGAGAAAAGAGCCCTTTCCATTCGAGCAGCTACAGAGGGCGGTGTTACTCAGCAGACAAGGTaGGTGACCCCAGCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: KTSEKRALSIRAATEGGVTQQTR*VTPAQP
Trigger: GGGCTGGGCTGGGGTCACTCACCTTGTCTGCTGAGT...AACACCGCCCTCTGTAGCTGCTCGAATGGAAAGGGCTCTTTTCTCTGAGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR GCA 90 bp GGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGCCTGGACATGGGCTCTaGTTCCCGCTGATGGTGCAG +
Preference number: 2 (lower is better)
Translates to: GAYEAGVCGLRSSNVFMWPGHGL*FPLMVQ
Trigger: CTGCACCATCAGCGGGAAGCAGAGCCCATGTCCAGG...CCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR GCA 90 bp GACAGGGGAAACATGCCAGGACCTAGCCTTACACACACACACGCGCGCACATGCCCTATTGCTAACCGCTaGGTCTGTGCTCCTAACTCC +
Preference number: 2 (lower is better)
Translates to: DRGNMPGPSLTHTHARTCPIANR*VCAPNS
Trigger: GGAGTTAGGAGCACAGACGCAGCGGTTAGCAATAGG...GCATGTGCGCGCGTGTGTGTGTGTAAGGCTAGGTCCTGGCATGTTTCCCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR GCA 90 bp ATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTTGGCGTGACTCCAAGCTaGGCAGCACACGCTCACCCC +
Preference number: 2 (lower is better)
Translates to: MDESVTLFCVNLYPQQDLGVTPS*AAHAHP
Trigger: GGGGTGAGCGTGTGCTGCGCAGCTTGGAGTCACGCC...AAGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp GGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGCGTGCCGGGCAGTGTaGCTATGCAATCAGACTGGG +
Preference number: 2 (lower is better)
Translates to: GQDSVLGVNSLTVGPMKQACRAV*LCNQTG
Trigger: CCCAGTCTGATTGCATAGCCACACTGCCCGGCACGC...CTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR CCA 90 bp TCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAATGTGCAGACAGGGGTaGATGTGGCGTGCCGGGCAG +
Preference number: 2 (lower is better)
Translates to: SGQCSRCELTYRGAYEAGMCRQG*MWRAGQ
Trigger: CTGCCCGGCACGCCACATCCACCCCTGTCTGCACAT...TCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR CCA 90 bp GTTTCCCCTGAGGGCACAGCTGGGCACCTTCAGGCCTTCACTTGCTTAAGTGTGCTGTCCAAGGGCTTCTaGGCTATCTCCGTGAGGACA +
Preference number: 2 (lower is better)
Translates to: VSPEGTAGHLQAFTCLSVLSKGF*AISVRT
Trigger: TGTCCTCACGGAGATAGCCCAGAAGCCCTTGGACAG...CACACTTAAGCAAGTGAAGGCCTGAAGGTGCCCAGCTGTGCCCTCAGGGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp CAAGGACAAATGTCCTCAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCGCTGTGGAATGGAGCTaGGTCCTGCAGACCCTCACC +
Preference number: 2 (lower is better)
Translates to: QGQMSSGRSSYCCELHGSAVEWS*VLQTLT
Trigger: GGTGAGGGTCTGCAGGACCCAGCTCCATTCCACAGC...GGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTGAGGACATTTGTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp CTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTGCAAGAGAACTGAGGCTGTaGAATGGAGCTGGGTCCTGC +
Preference number: 2 (lower is better)
Translates to: LQRAVFPPALYLGRTDCARELRL*NGAGSC
Trigger: GCAGGACCCAGCTCCATTCCACAGCCTCAGTTCTCT...TGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CAA 90 bp CCATTCGAGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTaGGGGAGAACAGACTGTGCACCCATGTTTATGGACCGAGGTTAC +
Preference number: 2 (lower is better)
Translates to: PFEQLQRAVFPPALY*GRTDCAPMFMDRGY
Trigger: GTAACCTCGGTCCATAAACATGGGTGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCTCGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR GCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAACGCAGGGTGGACGCCTaGAGGTCACGCCCACACCGG +
Preference number: 2 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQRRVDA*RSRPHR
Trigger: CCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCG...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
3UTR-3UTR GCA 90 bp CATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTCCACTTCCCGGTGTGTaGTGGCTCCCGAGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: HGRVSHSFLRESLPPTGPPLPGV*WLPSLS
Trigger: AGACAGACTCGGGAGCCAGCACACACCGGGAAGTGG...AGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR GCA 90 bp GTGGGCGAGTGTGACGTTCCCCCAGCTGGTCGCGGAGCTGACAGTGTGGGTGGTACTTTCCAAGGAACGTaGAAACACAAAATAGCTTGC +
Preference number: 2 (lower is better)
Translates to: VGECDVPPAGRGADSVGGTFQGT*KHKIAC
Trigger: GCAAGCTATTTTGTGTTTGCACGTTCCTTGGAAAGT...ACCACCCACACTGTCAGCTCCGCGACCAGCTGGGGGAACGTCACACTCGCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR GCA 90 bp CTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTGCAAGGTGCTGCAGTGTCTaGACTGAGTGCACACACTGT +
Preference number: 2 (lower is better)
Translates to: LQRAVFPPALYLGRTDCARCCSV*TECTHC
Trigger: ACAGTGTGTGCACTCAGTGCAGACACTGCAGCACCT...TGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR GCA 90 bp CAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTGAGGGTGCTGCGGGGTTACCCAGACGCCTCTaGTCTTTATCGTGGATCAAA +
Preference number: 2 (lower is better)
Translates to: QGDPATAVNCMAPEGAAGLPRRL*SLSWIK
Trigger: TTTGATCCACGATAAAGAGCAGAGGCGTCTGGGTAA...CCCCGCAGCACCCTCAGGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp ACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCAGGACAGTGTTCTACAGCAGGAGGCATCCTaGACATGGGCTCTGCTTCCC +
Preference number: 2 (lower is better)
Translates to: TCRIPSPRHASCGQDSVLQQEAS*TWALLP
Trigger: GGGAAGCAGAGCCCATGTCCAGGATGCCTCCTGCTG...TAGAACACTGTCCTGACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR CCA 90 bp ACCCAGACGCCTCTGCTCTTTATCGTGGATCAAAGTCCCTGGGGCTTTTGTGTGCTTCCCGGTGTGTGCTaGCTCCCGAGTCTGTCTAGA +
Preference number: 2 (lower is better)
Translates to: TQTPLLFIVDQSPWGFCVLPGVC*LPSLSR
Trigger: TCTAGACAGACTCGGGAGCCAGCACACACCGGGAAG...CACACAAAAGCCCCAGGGACTTTGATCCACGATAAAGAGCAGAGGCGTCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CAA 90 bp GCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTaGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCC +
Preference number: 2 (lower is better)
Translates to: AGRGQCGKTEAYTAL*SEQLMCRQGWMWRA
Trigger: GGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR TCA 90 bp ATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTTTCTGGGCTATCTCCGTaGGGACAGGGTCCGCTGAGA +
Preference number: 2 (lower is better)
Translates to: MDESVTLFCVNLYPQQDLSGLSP*GQGPLR
Trigger: TCTCAGCGGACCCTGTCCTCACGGAGATAGCCCAGA...AAGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp CATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTACTGAGGCTGTGGAATaGAGCTGGGTCCTGCAGACC +
Preference number: 2 (lower is better)
Translates to: HGRVSHSFLRESLPPTGPTEAVE*SWVLQT
Trigger: GGTCTGCAGGACCCAGCTCCATTCCACAGCCTCAGT...AGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAACGGATGAGATGTCAGTaGAGGTATGGCTCTAGGGTC +
Preference number: 2 (lower is better)
Translates to: FGAERTFPGIQKNCSEGERMRCQ*RYGSRV
Trigger: GACCCTAGAGCCATACCTTCACTGACATCTCATCCG...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
3UTR-3UTR TCA 90 bp CTGACCAGTGGGTCTTCACAGGTGCGGAGAGGCCAGCTTCTCGGTCTTCACCTCATCACCCTCAACCCTTaGCAAAGATGTATTTTAGGC +
Preference number: 2 (lower is better)
Translates to: LTSGSSQVRRGQLLGLHLITLNP*QRCILG
Trigger: GCCTAAAATACATCTTTGTCAAGGGTTGAGGGTGAT...GAGGTGAAGACCGAGAAGCTGGCCTCTCCGCACCTGTGAAGACCCACTGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp ATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTTTGTGCCGCAGAGAACTaGGGCTGTGGAATGGAGCTG +
Preference number: 2 (lower is better)
Translates to: MDESVTLFCVNLYPQQDLCAAEN*GCGMEL
Trigger: CAGCTCCATTCCACAGCCTCAGTTCTCTGCGGCACA...AAGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR GCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGCGCAGGGTGGACGCCTaGAGGTCACGCCCACACCGG +
Preference number: 2 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQRRVDA*RSRPHR
Trigger: CCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCG...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
3UTR-3UTR GCA 90 bp GGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGGGGGTGGATGTGGCGTaGCGGGCAGTGTGGCTATGC +
Preference number: 2 (lower is better)
Translates to: GQCGKTEAYTALLSEQLMGVDVA*RAVWLC
Trigger: GCATAGCCACACTGCCCGGCACGCCACATCCACCCC...CATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR GCA 90 bp ACCCAGACGCCTCTGCTCTTTATCGTGGATCAAAGTCCCTGGGGCTTTTGTGTGAGTGTCTGCACTGAGTaGACACACTGTCGCACTTGC +
Preference number: 2 (lower is better)
Translates to: TQTPLLFIVDQSPWGFCVSVCTE*THCRTC
Trigger: GCAAGTGCGACAGTGTGTGCACTCAGTGCAGACACT...CACACAAAAGCCCCAGGGACTTTGATCCACGATAAAGAGCAGAGGCGTCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR GCA 90 bp CAAGGACAAATGTCCTCAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCAACACCCTACAACCGTaGTCACCTGACAGCTCCAAG +
Preference number: 2 (lower is better)
Translates to: QGQMSSGRSSYCCELHGSNTLQP*SPDSSK
Trigger: CTTGGAGCTGTCAGGTGAGCACGGTTGTAGGGTGTT...GGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTGAGGACATTTGTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR GCA 90 bp TTCACGCACACGCATTCATGTCAACAAGGACATCAGGAGAAGTTAACATTATACACCCGGTGCCCGGCATaGGCCGGGGCTCGCTCAACA +
Preference number: 2 (lower is better)
Translates to: FTHTHSCQQGHQEKLTLYTRCPA*AGARST
Trigger: TGTTGAGCGAGCCCCGGCGCATGCCGGGCACCGGGT...GTATAATGTTAACTTCTCCTGATGTCCTTGTTGACATGAATGCGTGTGCGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACCCCGTAGCCGCAGGGTaGACGCCTGCAGGTCACGCC +
Preference number: 2 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHPVAAG*TPAGHA
Trigger: GGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGG...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
3UTR-3UTR CCA 90 bp ACCATGGAAGTGTGTGAGATTTCACGCACACGCATTCATGTCAACAAGGACATCGCTCCCAGAGAGCCCTaGGCTGGTCAGGACTCAGCA +
Preference number: 2 (lower is better)
Translates to: TMEVCEISRTRIHVNKDIAPREP*AGQDSA
Trigger: TGCTGAGTCCTGACCAGCCCAGGGCTCTCTGGGAGC...GATGTCCTTGTTGACATGAATGCGTGTGCGTGAAATCTCACACACTTCCATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp CATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTAGAACACCAATCCTCTaGGGACTGCATGGCCACGGA +
Preference number: 2 (lower is better)
Translates to: HGRVSHSFLRESLPPTGPRTPIL*GLHGHG
Trigger: TCCGTGGCCATGCAGTCCCCAGAGGATTGGTGTTCT...AGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp GTTTCCCCTGAGGGCACAGCTGGGCACCTTCAGGCCTTCACTTGCTTAAGTGTGTCTTCTAAGGGGCTATaGAAGAGCTGGTCACTAACA +
Preference number: 2 (lower is better)
Translates to: VSPEGTAGHLQAFTCLSVSSKGL*KSWSLT
Trigger: TGTTAGTGACCAGCTCTTTCATAGCCCCTTAGAAGA...CACACTTAAGCAAGTGAAGGCCTGAAGGTGCCCAGCTGTGCCCTCAGGGGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp ACCCTACAACCGTGCTCACCTGACAGCTCCAAGTTTGGAGATGAGCAGGGAGAGATCCCAAGTAGGATTTaGGGGGACACACTAAAGCAC +
Preference number: 2 (lower is better)
Translates to: TLQPCSPDSSKFGDEQGEIPSRI*GDTLKH
Trigger: GTGCTTTAGTGTGTCCCCTCAAATCCTACTTGGGAT...CTCTCCCTGCTCATCTCCAAACTTGGAGCTGTCAGGTGAGCACGGTTGTAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR GCA 90 bp GGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATACGAATACTTACCAGCCTGGACATGGGCTCTaGTTCCCGCTGATGGTGCAG +
Preference number: 2 (lower is better)
Translates to: GSVAMQSDWDEENTNTYQPGHGL*FPLMVQ
Trigger: CTGCACCATCAGCGGGAAGCAGAGCCCATGTCCAGG...CTGGTAAGTATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR GCA 90 bp GGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGAGTGATGCTTTCATGTaGTGGCCGTGGACAATGTGG +
Preference number: 2 (lower is better)
Translates to: GQDSVLGVNSLTVGPMKQSDAFM*WPWTMW
Trigger: CCACATTGTCCACGGCCAGCACATGAAAGCATCACT...CTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR CCA 90 bp TTCACGCACACGCATTCATGTCAACAAGGACATCAGGAGAAGTTAACATTATACCGTCACTGCCCAGTGTaGGGAACCCGGTGCCCGGCA +
Preference number: 2 (lower is better)
Translates to: FTHTHSCQQGHQEKLTLYRHCPV*GTRCPA
Trigger: TGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACG...GTATAATGTTAACTTCTCCTGATGTCCTTGTTGACATGAATGCGTGTGCGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp CAAGGACAAATGTCCTCAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCCTCTGCTCTTTATCGTaGATCAAAGTCCCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: QGQMSSGRSSYCCELHGSLCSLS*IKVPGA
Trigger: AGCCCCAGGGACTTTGATCCACGATAAAGAGCAGAG...GGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTGAGGACATTTGTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAGGAAACACAAACGGATaGGATGTCAGTGAAGGTATG +
Preference number: 2 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRGNTNG*DVSEGM
Trigger: CATACCTTCACTGACATCTCATCCGTTTGTGTTTCC...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
3UTR-3UTR TCA 90 bp TACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCGTGAACGTTCACCAGTaGGGTTTACAGCTTTGGAAA +
Preference number: 2 (lower is better)
Translates to: YSAVVRTTHVQTGVDVACVNVHQ*GLQLWK
Trigger: TTTCCAAAGCTGTAAACCTCACTGGTGAACGTTCAC...GCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR TCA 90 bp CAAGGACAAATGTCCTCAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCCTACGCCCTCAAAGATaGATCCTATTGCTAACCGCT +
Preference number: 2 (lower is better)
Translates to: QGQMSSGRSSYCCELHGSLRPQR*ILLLTA
Trigger: AGCGGTTAGCAATAGGATTCATCTTTGAGGGCGTAG...GGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTGAGGACATTTGTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp GTTTCCCCTGAGGGCACAGCTGGGCACCTTCAGGCCTTCACTTGCTTAAGTGTGAGACAATTTATGCTGTaGATCAGGGGTACTTCTCGT +
Preference number: 2 (lower is better)
Translates to: VSPEGTAGHLQAFTCLSVRQFML*IRGTSR
Trigger: ACGAGAAGTACCCCTGATTCACAGCATAAATTGTCT...CACACTTAAGCAAGTGAAGGCCTGAAGGTGCCCAGCTGTGCCCTCAGGGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp AAGACCTCAGAGAAAAGAGCCCTTTCCATTCGAGCAGCTACAGAGGGCGGTGTTTCACTCTTTTCTGCGTaGATCTCTACCCCCAACAGG +
Preference number: 2 (lower is better)
Translates to: KTSEKRALSIRAATEGGVSLFSA*ISTPNR
Trigger: CCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGA...AACACCGCCCTCTGTAGCTGCTCGAATGGAAAGGGCTCTTTTCTCTGAGGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR GCA 90 bp GACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTTCAGAACAACTCATGTaGAGACAGGGGTGGATGTGG +
Preference number: 2 (lower is better)
Translates to: DSVLGVNSLTVGPMKQECSEQLM*RQGWMW
Trigger: CCACATCCACCCCTGTCTGCACATGAGTTGTTCTGA...ACACTCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR TCA 90 bp GGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGGTGAACGTTCACCAGTaGGGTTTACAGCTTTGGAAA +
Preference number: 2 (lower is better)
Translates to: GAYEAGVCGLRSSNVFMWVNVHQ*GLQLWK
Trigger: TTTCCAAAGCTGTAAACCTCACTGGTGAACGTTCAC...CCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR TCA 90 bp TTCACGCACACGCATTCATGTCAACAAGGACATCAGGAGAAGTTAACATTATACAGCTGGTCGCGGAGCTaGCAGTGTGGGTGGTTGGTG +
Preference number: 2 (lower is better)
Translates to: FTHTHSCQQGHQEKLTLYSWSRS*QCGWLV
Trigger: CACCAACCACCCACACTGTCAGCTCCGCGACCAGCT...GTATAATGTTAACTTCTCCTGATGTCCTTGTTGACATGAATGCGTGTGCGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp GGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGGAGGCATCCTGGACATaGGCTCTGCTTCCCGCTGAT +
Preference number: 2 (lower is better)
Translates to: GQCGKTEAYTALLSEQLMEASWT*ALLPAD
Trigger: ATCAGCGGGAAGCAGAGCCCATGTCCAGGATGCCTC...CATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR CCA 90 bp CTGACCAGTGGGTCTTCACAGGTGCGGAGAGGCCAGCTTCTCGGTCTTCACCTCCAACCAATCCCTTTATaGACATATAATTCCACAACA +
Preference number: 2 (lower is better)
Translates to: LTSGSSQVRRGQLLGLHLQPIPL*TYNSTT
Trigger: TGTTGTGGAATTATATGTCCATAAAGGGATTGGTTG...GAGGTGAAGACCGAGAAGCTGGCCTCTCCGCACCTGTGAAGACCCACTGGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp ACCATGGAAGTGTGTGAGATTTCACGCACACGCATTCATGTCAACAAGGACATCCTTGCAACTGACCAGTaGGTCTTCACAGGTGCGGAG +
Preference number: 2 (lower is better)
Translates to: TMEVCEISRTRIHVNKDILATDQ*VFTGAE
Trigger: CTCCGCACCTGTGAAGACCCACTGGTCAGTTGCAAG...GATGTCCTTGTTGACATGAATGCGTGTGCGTGAAATCTCACACACTTCCATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp GGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGACAATGTGGAAAAACTaGAGCGTATACAGCGCTGTT +
Preference number: 2 (lower is better)
Translates to: GQDSVLGVNSLTVGPMKQTMWKN*SVYSAV
Trigger: AACAGCGCTGTATACGCTTCAGTTTTTCCACATTGT...CTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR TCA 90 bp CTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTGCACTTGCCAAAGATGAATaGACCTATTACAATTTGAGC +
Preference number: 2 (lower is better)
Translates to: LQRAVFPPALYLGRTDCALAKDE*TYYNLS
Trigger: GCTCAAATTGTAATAGGTTCATTCATCTTTGGCAAG...TGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp AAGGCACGCGTCCTGCGGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGCTATGCAATCAGACTaGGATGAAGAGAATACGAAT +
Preference number: 2 (lower is better)
Translates to: KARVLRSGQCSRCELTYRAMQSD*DEENTN
Trigger: ATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGC...ACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACCGCAGGACGCGTGCCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR CCA 90 bp TTCACGCACACGCATTCATGTCAACAAGGACATCAGGAGAAGTTAACATTATACCCATCCGGGAGGTGCTaGGAGACCTGTCCTTTCCCT +
Preference number: 2 (lower is better)
Translates to: FTHTHSCQQGHQEKLTLYPSGRC*ETCPFP
Trigger: AGGGAAAGGACAGGTCTCCCAGCACCTCCCGGATGG...GTATAATGTTAACTTCTCCTGATGTCCTTGTTGACATGAATGCGTGTGCGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp CAAGGACAAATGTCCTCAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCACACCTGCAATTGTGTaGTATAAACTGAGGCACATG +
Preference number: 2 (lower is better)
Translates to: QGQMSSGRSSYCCELHGSTPAIV*YKLRHM
Trigger: CATGTGCCTCAGTTTATACCACACAATTGCAGGTGT...GGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTGAGGACATTTGTCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp TCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGAATCAATCATTAAGGTaGACGTTCACCAGTGAGGTT +
Preference number: 2 (lower is better)
Translates to: SLTVGPMKQECVAFEVRMNQSLR*TFTSEV
Trigger: AACCTCACTGGTGAACGTTCACCTTAATGATTGATT...CATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACGGTAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR TCA 90 bp TCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAACAATGTGGAAAAACTaGAGCGTATACAGCGCTGTT +
Preference number: 2 (lower is better)
Translates to: SGQCSRCELTYRGAYEAGTMWKN*SVYSAV
Trigger: AACAGCGCTGTATACGCTTCAGTTTTTCCACATTGT...TCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR TCA 90 bp ACCATGGAAGTGTGTGAGATTTCACGCACACGCATTCATGTCAACAAGGACATCTCCCTGTTAGAGAAGTaGTCCCTGATGGAGCCACTT +
Preference number: 2 (lower is better)
Translates to: TMEVCEISRTRIHVNKDISLLEK*SLMEPL
Trigger: AAGTGGCTCCATCAGGGATCACTTCTCTAACAGGGA...GATGTCCTTGTTGACATGAATGCGTGTGCGTGAAATCTCACACACTTCCATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp CATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTATACTAACCCCTAACTaGAGTCACATCAGCTTCTTC +
Preference number: 2 (lower is better)
Translates to: HGRVSHSFLRESLPPTGPILTPN*SHISFF
Trigger: GAAGAAGCTGATGTGACTTCAGTTAGGGGTTAGTAT...AGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR GCA 90 bp ACCATGGAAGTGTGTGAGATTTCACGCACACGCATTCATGTCAACAAGGACATCGGTCCAGACAGCACCTaGCTTTATGACGAAGCACTT +
Preference number: 2 (lower is better)
Translates to: TMEVCEISRTRIHVNKDIGPDST*LYDEAL
Trigger: AAGTGCTTCGTCATAAAGGCAGGTGCTGTCTGGACC...GATGTCCTTGTTGACATGAATGCGTGTGCGTGAAATCTCACACACTTCCATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CCA 90 bp GCAAGAAAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTGCTATGCAATCAGACTaGGATGAAGAGAATACGAAT +
Preference number: 2 (lower is better)
Translates to: ARKPVTCRIPSPRHASCGAMQSD*DEENTN
Trigger: ATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGC...ACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTTTCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR CCA 90 bp TTCACGCACACGCATTCATGTCAACAAGGACATCAGGAGAAGTTAACATTATACCATGAGGGGTGTGGGTaGGAACACCCTGCACAGCTA +
Preference number: 2 (lower is better)
Translates to: FTHTHSCQQGHQEKLTLYHEGCG*EHPAQL
Trigger: TAGCTGTGCAGGGTGTTCCCACCCACACCCCTCATG...GTATAATGTTAACTTCTCCTGATGTCCTTGTTGACATGAATGCGTGTGCGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp GTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTAATCAATCATTAAGGTaGACGTTCACCAGTGAGGTT +
Preference number: 2 (lower is better)
Translates to: VGPMKQECVAFEVRMCSCNQSLR*TFTSEV
Trigger: AACCTCACTGGTGAACGTTCACCTTAATGATTGATT...ACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR CCA 90 bp ACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCAGGACAGTGTTCTAGCTATGCAATCAGACTaGGATGAAGAGAATACGAAT +
Preference number: 2 (lower is better)
Translates to: TCRIPSPRHASCGQDSVLAMQSD*DEENTN
Trigger: ATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGC...TAGAACACTGTCCTGACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR TCA 90 bp TTCACGCACACGCATTCATGTCAACAAGGACATCAGGAGAAGTTAACATTATACTCCACACACCCGCTTTaGGAGAACACCAATCCTCTG +
Preference number: 2 (lower is better)
Translates to: FTHTHSCQQGHQEKLTLYSTHPL*ENTNPL
Trigger: CAGAGGATTGGTGTTCTCTCAAAGCGGGTGTGTGGA...GTATAATGTTAACTTCTCCTGATGTCCTTGTTGACATGAATGCGTGTGCGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR GCA 90 bp TCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGATGCAACACTAACTTaGAAAGATTCCCACAACATA +
Preference number: 2 (lower is better)
Translates to: SGQCSRCELTYRGAYEAGDATLT*KDSHNI
Trigger: TATGTTGTGGGAATCTTTGCAAGTTAGTGTTGCATC...TCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR GCA 90 bp GTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTCACCTGAAAATCAGATaGAACACTAACTTGCAAAGA +
Preference number: 2 (lower is better)
Translates to: VGPMKQECVAFEVRMCSCHLKIR*NTNLQR
Trigger: TCTTTGCAAGTTAGTGTTGCATCTGATTTTCAGGTG...ACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR TCA 90 bp GGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATACGAATACTTACCAGAATCAATCATTAAGGTaGACGTTCACCAGTGAGGTT +
Preference number: 2 (lower is better)
Translates to: GSVAMQSDWDEENTNTYQNQSLR*TFTSEV
Trigger: AACCTCACTGGTGAACGTTCACCTTAATGATTGATT...CTGGTAAGTATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR CAA 90 bp CTGGTCACTAACAGAGCACGTGGCCCCTGGAATCACCCTCAACCCTaGACAAAGATGTATTTTAGGCTATTTGTAAATAATCGTTTAAAT +
Preference number: 2 (lower is better)
Translates to: LVTNRARGPWNHPQP*TKMYFRLFVNNRLN
Trigger: ATTTAAACGATTATTTACAAATAGCCTAAAATACATCTTTGTCAAGGGTTGAGGGTGATTCCAGGGGCCACGTGCTCTGTTAGTGACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR TCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAAGACCAACAAAACTCCTaGTTATTCAAATCAAGGACT +
Preference number: 2 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQDQQNS*LFKSRT
Trigger: AGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTC...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
3UTR-3UTR GCA 90 bp AATTTGAAATTTGGGGCAGGATATGATCTTAAGAGTCTAAACATTCAAGAGACGTCAGAACAACTCATGTaGAGACAGGGGTGGATGTGG +
Preference number: 2 (lower is better)
Translates to: NLKFGAGYDLKSLNIQETSEQLM*RQGWMW
Trigger: CCACATCCACCCCTGTCTGCACATGAGTTGTTCTGA...CGTCTCTTGAATGTTTAGACTCTTAAGATCATATCCTGCCCCAAATTTCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR CCA 90 bp AATTTGAAATTTGGGGCAGGATATGATCTTAAGAGTCTAAACATTCAAGAGACGGATGCTTTCATGTGCTaGCCGTGGACAATGTGGAAA +
Preference number: 2 (lower is better)
Translates to: NLKFGAGYDLKSLNIQETDAFMC*PWTMWK
Trigger: TTTCCACATTGTCCACGGCCAGCACATGAAAGCATC...CGTCTCTTGAATGTTTAGACTCTTAAGATCATATCCTGCCCCAAATTTCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
3UTR CCA 72 bp CCCCGTCAGGCGGCGTCGTGGCCTCAGCAAGTGCCTTaGTGGGCGAGTGTGACGTTCCCCCAGCTGGTCGCG +
Preference number: 3 (lower is better)
Translates to: PRQAASWPQQVP*WASVTFPQLVA
Trigger: CGCGACCAGCTGGGGGAACGTCACACTCGCCCACCAAGGCACTTGCTGAGGCCACGACGCCGCCTGACGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR GCA 72 bp CGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATaGGCCGGGGCTCGCTCAACACCCTACAACCGTGCT +
Preference number: 3 (lower is better)
Translates to: RHCPVWGTRCPA*AGARSTPYNRA
Trigger: AGCACGGTTGTAGGGTGTTGAGCGAGCCCCGGCGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 72 bp CGTCAGGCGGCGTCGTGGCCTCAGCAAGTGCCTTGGTaGGCGAGTGTGACGTTCCCCCAGCTGGTCGCGGAG +
Preference number: 3 (lower is better)
Translates to: RQAASWPQQVPW*ASVTFPQLVAE
Trigger: CTCCGCGACCAGCTGGGGGAACGTCACACTCGCCCACCAAGGCACTTGCTGAGGCCACGACGCCGCCTGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR TCA 72 bp GGTCCTGCAGACCCTCACCCAGCACTTCTGGGGGCGTaGCTCCAAGCTGCGCAGCACACGCTCACCCCTGAC +
Preference number: 3 (lower is better)
Translates to: GPADPHPALLGA*LQAAQHTLTPD
Trigger: GTCAGGGGTGAGCGTGTGCTGCGCAGCTTGGAGTCACGCCCCCAGAAGTGCTGGGTGAGGGTCTGCAGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 72 bp CATGAGGGGTGTGGGTGGGAACACCCTGCACAGCTATaGCAGGAACACCCGCCGAGGCCTGGTGACAGGGAC +
Preference number: 3 (lower is better)
Translates to: HEGCGWEHPAQL*QEHPPRPGDRD
Trigger: GTCCCTGTCACCAGGCCTCGGCGGGTGTTCCTGCCATAGCTGTGCAGGGTGTTCCCACCCACACCCCTCATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 72 bp CCCCAGCTAGCTAGGGTGCGGCATGAGGGGTGTGGGTaGGAACACCCTGCACAGCTATGGCAGGAACACCCG +
Preference number: 3 (lower is better)
Translates to: PQLARVRHEGCG*EHPAQLWQEHP
Trigger: CGGGTGTTCCTGCCATAGCTGTGCAGGGTGTTCCCACCCACACCCCTCATGCCGCACCCTAGCTAGCTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 72 bp CCGAGGCCTGCGGCTTCACGCGGAAATGACGGGGGCTaGGCATGGTTAACAGGCAGGCATCTTGGCTGCGGT +
Preference number: 3 (lower is better)
Translates to: PRPAASRGNDGG*AWLTGRHLGCG
Trigger: ACCGCAGCCAAGATGCCTGCCTGTTAACCATGCCCAGCCCCCGTCATTTCCGCGTGAAGCCGCAGGCCTCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR TCA 72 bp GACCAAGGCTCCGAGGCCTGCGGCTTCACGCGGAAATaGCGGGGGCTGGGCATGGTTAACAGGCAGGCATCT +
Preference number: 3 (lower is better)
Translates to: DQGSEACGFTRK*RGLGMVNRQAS
Trigger: AGATGCCTGCCTGTTAACCATGCCCAGCCCCCGTCATTTCCGCGTGAAGCCGCAGGCCTCGGAGCCTTGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 72 bp ATACAAGCTACTAAGACTTCTCCCGTAGCCGCAGGGTaGACGCCTGCAGGTCACGCCCACACCGGCCTCCGG +
Preference number: 3 (lower is better)
Translates to: IQATKTSPVAAG*TPAGHAHTGLR
Trigger: CCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGTAGCTTGTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
3UTR CCA 72 bp CTGCGCAGCACACGCTCACCCCTGACCACAGCTCTGTaGAGTCACCACCATCAGCACCCTCAGGTGTGGCCT +
Preference number: 3 (lower is better)
Translates to: LRSTRSPLTTAL*SHHHQHPQVWP
Trigger: AGGCCACACCTGAGGGTGCTGATGGTGGTGACTCCACAGAGCTGTGGTCAGGGGTGAGCGTGTGCTGCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 72 bp CCTGCGGCTTCACGCGGAAATGACGGGGGCTGGGCATaGTTAACAGGCAGGCATCTTGGCTGCGGTCCAGTC +
Preference number: 3 (lower is better)
Translates to: PAASRGNDGGWA*LTGRHLGCGPV
Trigger: GACTGGACCGCAGCCAAGATGCCTGCCTGTTAACCATGCCCAGCCCCCGTCATTTCCGCGTGAAGCCGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CAA 90 bp AGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTCCAGCCCAGCCCTCCTaGTCCCGGTGCCATCCGGGA +
Preference number: 3 (lower is better)
Translates to: SSYRGRCFLLPCTWGEQTPAQPS*SRCHPG
Trigger: TCCCGGATGGCACCGGGACAAGGAGGGCTGGGCTGG...AGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CAA 90 bp GCCAAGTCAAGTAATCAGTACGTGAAGCGGGCCGAGTACCCGATGGCCTGGCCCAAGTCCCTGGGGCTTTaGTGTGTCCCCGTCAGGCGG +
Preference number: 3 (lower is better)
Translates to: AKSSNQYVKRAEYPMAWPKSLGL*CVPVRR
Trigger: CCGCCTGACGGGGACACACAAAAGCCCCAGGGACTT...GGGCCAGGCCATCGGGTACTCGGCCCGCTTCACGTACTGATTACTTGACTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR GCA 72 bp ACACAGGGCAGCAGGAGGCATCCTGGACATGGGCTCTaGTTCCCGCTGATGGTGCAGCCGGTGTCTGTGATC +
Preference number: 3 (lower is better)
Translates to: TQGSRRHPGHGL*FPLMVQPVSVI
Trigger: GATCACAGACACCGGCTGCACCATCAGCGGGAAGCAGAGCCCATGTCCAGGATGCCTCCTGCTGCCCTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR GCA 72 bp CGCAGAGAACTGAGGCTGTGGAATGGAGCTGGGTCCTaGAGACCCTCACCCAGCACTTCTGGGGGCGTGACT +
Preference number: 3 (lower is better)
Translates to: RRELRLWNGAGS*RPSPSTSGGVT
Trigger: AGTCACGCCCCCAGAAGTGCTGGGTGAGGGTCTGCAGGACCCAGCTCCATTCCACAGCCTCAGTTCTCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 72 bp GTGACGTTCCCCCAGCTGGTCGCGGAGCTGACAGTGTaGGTGGTTGGTGCCATCGCACTCAGCAGACAAGGT +
Preference number: 3 (lower is better)
Translates to: VTFPQLVAELTV*VVGAIALSRQG
Trigger: ACCTTGTCTGCTGAGTGCGATGGCACCAACCACCCACACTGTCAGCTCCGCGACCAGCTGGGGGAACGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR GCA 72 bp CCTATTGCTAACCGCTGCGTCTGTGCTCCTAACTCCTaGTCCCAGAGAGCCCTGGGCTGGTCAGGACTCAGC +
Preference number: 3 (lower is better)
Translates to: PIANRCVCAPNS*SQRALGWSGLS
Trigger: GCTGAGTCCTGACCAGCCCAGGGCTCTCTGGGAGCAGGAGTTAGGAGCACAGACGCAGCGGTTAGCAATAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR GCA 72 bp GGCATGCGCCGGGGCTCGCTCAACACCCTACAACCGTaGTCACCTGACAGCTCCAAGTTTGGAGATGAGCAG +
Preference number: 3 (lower is better)
Translates to: GMRRGSLNTLQP*SPDSSKFGDEQ
Trigger: CTGCTCATCTCCAAACTTGGAGCTGTCAGGTGAGCACGGTTGTAGGGTGTTGAGCGAGCCCCGGCGCATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 72 bp TCCAGGAGGGCCGGGCTTTTCCTCTCCCTGGTCACGTaGAGCTGGCCAGAGCTCTTCACAAGCAACACCAAG +
Preference number: 3 (lower is better)
Translates to: SRRAGLFLSLVT*SWPELFTSNTK
Trigger: CTTGGTGTTGCTTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCCTCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 72 bp GTGCTGCATGTGCCGCAGAGAACTGAGGCTGTGGAATaGAGCTGGGTCCTGCAGACCCTCACCCAGCACTTC +
Preference number: 3 (lower is better)
Translates to: VLHVPQRTEAVE*SWVLQTLTQHF
Trigger: GAAGTGCTGGGTGAGGGTCTGCAGGACCCAGCTCCATTCCACAGCCTCAGTTCTCTGCGGCACATGCAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR TCA 72 bp GTCTGCACTGAGTGCACACACTGTCGCACTTGCAACTaGCCAGTGGGTCTTCACAGGTGCGGAGAGGCCAGC +
Preference number: 3 (lower is better)
Translates to: VCTECTHCRTCN*PVGLHRCGEAS
Trigger: GCTGGCCTCTCCGCACCTGTGAAGACCCACTGGTCAGTTGCAAGTGCGACAGTGTGTGCACTCAGTGCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR TCA 72 bp GGGCTTCTGGGCTATCTCCGTGAGGACAGGGTCCGCTaGGACAGGGGAAACATGCCAGGACCTAGCCTTACA +
Preference number: 3 (lower is better)
Translates to: GLLGYLREDRVR*DRGNMPGPSLT
Trigger: TGTAAGGCTAGGTCCTGGCATGTTTCCCCTGTCTCAGCGGACCCTGTCCTCACGGAGATAGCCCAGAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR TCA 72 bp AGGACAAATGTCCTCAGGGAGATCCAGCTACTGCTGTaGACTGCATGGCTCCTGAGGGTGCTGCGGGGGCAG +
Preference number: 3 (lower is better)
Translates to: RTNVLREIQLLL*TAWLLRVLRGQ
Trigger: CTGCCCCCGCAGCACCCTCAGGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTGAGGACATTTGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR GCA 72 bp TGCTCTTTCCACCCCGGTAGGGAGGTGCTGAGGTGCTaGAGTGTCTGCACTGAGTGCACACACTGTCGCACT +
Preference number: 3 (lower is better)
Translates to: CSFHPGREVLRC*SVCTECTHCRT
Trigger: AGTGCGACAGTGTGTGCACTCAGTGCAGACACTGCAGCACCTCAGCACCTCCCTACCGGGGTGGAAAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR GCA 72 bp AAATGTCCTCAGGGAGATCCAGCTACTGCTGTGAACTaGATGGCTCCTGAGGGTGCTGCGGGGGCAGCTCCA +
Preference number: 3 (lower is better)
Translates to: KCPQGDPATAVN*MAPEGAAGAAP
Trigger: TGGAGCTGCCCCCGCAGCACCCTCAGGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTGAGGACATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 72 bp CTGAGTGCACACACTGTCGCACTTGCAACTGACCAGTaGGTCTTCACAGGTGCGGAGAGGCCAGCTTCTCGG +
Preference number: 3 (lower is better)
Translates to: LSAHTVALATDQ*VFTGAERPASR
Trigger: CCGAGAAGCTGGCCTCTCCGCACCTGTGAAGACCCACTGGTCAGTTGCAAGTGCGACAGTGTGTGCACTCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 72 bp GCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTaGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATC +
Preference number: 3 (lower is better)
Translates to: ALLSEQLMCRQG*MWRAGQCGYAI
Trigger: GATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR CAA 90 bp GCCAAGTCAAGTAATCAGTACGTGAAGCGGGCCGAGTACCCGATGGCCTGGCCCATCCACACACCCGCTTaGAGAGAACACCAATCCTCT +
Preference number: 3 (lower is better)
Translates to: AKSSNQYVKRAEYPMAWPIHTPA*REHQSS
Trigger: AGAGGATTGGTGTTCTCTCAAAGCGGGTGTGTGGAT...GGGCCAGGCCATCGGGTACTCGGCCCGCTTCACGTACTGATTACTTGACTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR GCA 72 bp AGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTaGCGGGCAGTGTGGCTATGCAATCAGACTGGGATG +
Preference number: 3 (lower is better)
Translates to: RTTHVQTGVDVA*RAVWLCNQTGM
Trigger: CATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR GCA 72 bp GAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTaGAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGT +
Preference number: 3 (lower is better)
Translates to: EAYTALLSEQLM*RQGWMWRAGQC
Trigger: ACACTGCCCGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
3UTR CCA 72 bp GTGCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTaGCTATGCAATCAGACTGGGATGAAGAGAATACGA +
Preference number: 3 (lower is better)
Translates to: VQTGVDVACRAV*LCNQTGMKRIR
Trigger: TCGTATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR CCA 72 bp GATCCACACACCCGCTTTGAGAGAACACCAATCCTCTaGGGACTGCATGGCCACGGAGACACTTCAGTTGGG +
Preference number: 3 (lower is better)
Translates to: DPHTRFERTPIL*GLHGHGDTSVG
Trigger: CCCAACTGAAGTGTCTCCGTGGCCATGCAGTCCCCAGAGGATTGGTGTTCTCTCAAAGCGGGTGTGTGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR TCA 72 bp AGAAAAAGTGCTCTTTCCACCCCGGTAGGGAGGTGCTaGGGTGCTGCAGTGTCTGCACTGAGTGCACACACT +
Preference number: 3 (lower is better)
Translates to: RKSALSTPVGRC*GAAVSALSAHT
Trigger: AGTGTGTGCACTCAGTGCAGACACTGCAGCACCTCAGCACCTCCCTACCGGGGTGGAAAGAGCACTTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR GCA 72 bp CCTACGCCCTCAAAGATGAATCCTATTGCTAACCGCTaGGTCTGTGCTCCTAACTCCTGCTCCCAGAGAGCC +
Preference number: 3 (lower is better)
Translates to: PTPSKMNPIANR*VCAPNSCSQRA
Trigger: GGCTCTCTGGGAGCAGGAGTTAGGAGCACAGACGCAGCGGTTAGCAATAGGATTCATCTTTGAGGGCGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 72 bp TTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTaGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTG +
Preference number: 3 (lower is better)
Translates to: LSEQLMCRQGWM*RAGQCGYAIRL
Trigger: CAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR GCA 72 bp GTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTaGACCCATGTTTATGGACCGAGGTTACTCCACAGG +
Preference number: 3 (lower is better)
Translates to: VSSCPVLGENRL*THVYGPRLLHR
Trigger: CCTGTGGAGTAACCTCGGTCCATAAACATGGGTGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CAA 90 bp CAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCCGGTGAGGTTTACAGCTTaGGAAAACAGTGACAGGAAG +
Preference number: 3 (lower is better)
Translates to: QRCCQNNSCADRGGCGVPVRFTA*ENSDRK
Trigger: CTTCCTGTCACTGTTTTCCAAAGCTGTAAACCTCAC...CGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR CAA 90 bp AAGACCTCAGAGAAAAGAGCCCTTTCCATTCGAGCAGCTACAGAGGGCGGTGTTGCCAAGATGAGCTGGTaGCAGGCTGTGGGTTTTTCC +
Preference number: 3 (lower is better)
Translates to: KTSEKRALSIRAATEGGVAKMSW*QAVGFS
Trigger: GGAAAAACCCACAGCCTGCAACCAGCTCATCTTGGC...AACACCGCCCTCTGTAGCTGCTCGAATGGAAAGGGCTCTTTTCTCTGAGGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CAA 90 bp AAGACCTCAGAGAAAAGAGCCCTTTCCATTCGAGCAGCTACAGAGGGCGGTGTTCACACACTGTCGCACTaGCAACTGACCAGTGGGTCT +
Preference number: 3 (lower is better)
Translates to: KTSEKRALSIRAATEGGVHTLSH*QLTSGS
Trigger: AGACCCACTGGTCAGTTGCAAGTGCGACAGTGTGTG...AACACCGCCCTCTGTAGCTGCTCGAATGGAAAGGGCTCTTTTCTCTGAGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CAA 90 bp CTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTGCACCTTCAGGCCTTCACTaGCTTAAGTGTGAACAGCAA +
Preference number: 3 (lower is better)
Translates to: LQRAVFPPALYLGRTDCAPSGLH*LKCEQQ
Trigger: TTGCTGTTCACACTTAAGCAAGTGAAGGCCTGAAGG...TGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR TCA 72 bp GGTACTTCTCGTGCCACAGTCCTACGCCCTCAAAGATaGATCCTATTGCTAACCGCTGCGTCTGTGCTCCTA +
Preference number: 3 (lower is better)
Translates to: GTSRATVLRPQR*ILLLTAASVLL
Trigger: TAGGAGCACAGACGCAGCGGTTAGCAATAGGATTCATCTTTGAGGGCGTAGGACTGTGGCACGAGAAGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR TCA 72 bp GTTAAGTCTCCTGGAAATCCATCCCTGTTAGAGAAGTaGTCCCTGATGGAGCCACTTCCCGGTGTGTGCTGG +
Preference number: 3 (lower is better)
Translates to: VKSPGNPSLLEK*SLMEPLPGVCW
Trigger: CCAGCACACACCGGGAAGTGGCTCCATCAGGGATCACTTCTCTAACAGGGATGGATTTCCAGGAGACTTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR GCA 72 bp ACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGGCTATaGAATCAGACTGGGATGAAGAGAATACGAATACTT +
Preference number: 3 (lower is better)
Translates to: TGVDVACRAVWL*NQTGMKRIRIL
Trigger: AAGTATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR CCA 72 bp CCCCATGTGTGGGAGGCATGGACACCTGCAATTGTGTaGTATAAACTGAGGCACATGGACGAGTCAGTCACT +
Preference number: 3 (lower is better)
Translates to: PHVWEAWTPAIV*YKLRHMDESVT
Trigger: AGTGACTGACTCGTCCATGTGCCTCAGTTTATACCACACAATTGCAGGTGTCCATGCCTCCCACACATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CAA 90 bp CATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTCTGACAGCTCCAAGTTaGGAGATGAGCAGGGAGAGA +
Preference number: 3 (lower is better)
Translates to: HGRVSHSFLRESLPPTGPLTAPS*EMSRER
Trigger: TCTCTCCCTGCTCATCTCCAAACTTGGAGCTGTCAG...AGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CAA 90 bp AAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCAGGACGTGAGGTTTACAGCTTaGGAAAACAGTGACAGGAAG +
Preference number: 3 (lower is better)
Translates to: KPVTCRIPSPRHASCGQDVRFTA*ENSDRK
Trigger: CTTCCTGTCACTGTTTTCCAAAGCTGTAAACCTCAC...GTCCTGACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR TCA 72 bp GGGAGGCATGGACACCTGCAATTGTGTGGTATAAACTaGGGCACATGGACGAGTCAGTCACTCTTTTCTGCG +
Preference number: 3 (lower is better)
Translates to: GRHGHLQLCGIN*GTWTSQSLFSA
Trigger: CGCAGAAAAGAGTGACTGACTCGTCCATGTGCCTCAGTTTATACCACACAATTGCAGGTGTCCATGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR GCA 72 bp GTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTaGGGTCAGGACAGTGTTCTAGGTGTGAACTCACTT +
Preference number: 3 (lower is better)
Translates to: VTCRIPSPRHAS*GQDSVLGVNSL
Trigger: AAGTGAGTTCACACCTAGAACACTGTCCTGACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
3UTR GCA 72 bp AGTCCCTTGCCCTGTGTTACTTTACCCAGACGCCTCTaGTCTTTATCGTGGATCAAAGTCCCTGGGGCTTTT +
Preference number: 3 (lower is better)
Translates to: SPLPCVTLPRRL*SLSWIKVPGAF
Trigger: AAAAGCCCCAGGGACTTTGATCCACGATAAAGAGCAGAGGCGTCTGGGTAAAGTAACACAGGGCAAGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 72 bp TGTCAAAACCCACTAGGTCCCCATGTGTGGGAGGCATaGACACCTGCAATTGTGTGGTATAAACTGAGGCAC +
Preference number: 3 (lower is better)
Translates to: CQNPLGPHVWEA*TPAIVWYKLRH
Trigger: GTGCCTCAGTTTATACCACACAATTGCAGGTGTCCATGCCTCCCACACATGGGGACCTAGTGGGTTTTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 72 bp ACACCACGCTGTCAAAACCCACTAGGTCCCCATGTGTaGGAGGCATGGACACCTGCAATTGTGTGGTATAAA +
Preference number: 3 (lower is better)
Translates to: TPRCQNPLGPHV*EAWTPAIVWYK
Trigger: TTTATACCACACAATTGCAGGTGTCCATGCCTCCCACACATGGGGACCTAGTGGGTTTTGACAGCGTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 72 bp TGTACTTGGGGAGAACAGACTGTGCACCCATGTTTATaGACCGAGGTTACTCCACAGGCATTTCAGACCAAG +
Preference number: 3 (lower is better)
Translates to: CTWGEQTVHPCL*TEVTPQAFQTK
Trigger: CTTGGTCTGAAATGCCTGTGGAGTAACCTCGGTCCATAAACATGGGTGCACAGTCTGTTCTCCCCAAGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR-3UTR CAA 90 bp GAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGGTGAGGTTTACAGCTTaGGAAAACAGTGACAGGAAG +
Preference number: 3 (lower is better)
Translates to: EAYTALLSEQLMCRQGWMVRFTA*ENSDRK
Trigger: CTTCCTGTCACTGTTTTCCAAAGCTGTAAACCTCAC...CATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR-3UTR CAA 90 bp ACCCTACAACCGTGCTCACCTGACAGCTCCAAGTTTGGAGATGAGCAGGGAGAGAATCACCCTCAACCCTaGACAAAGATGTATTTTAGG +
Preference number: 3 (lower is better)
Translates to: TLQPCSPDSSKFGDEQGENHPQP*TKMYFR
Trigger: CCTAAAATACATCTTTGTCAAGGGTTGAGGGTGATT...CTCTCCCTGCTCATCTCCAAACTTGGAGCTGTCAGGTGAGCACGGTTGTAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR TCA 72 bp AGCAGCTTTTGGAAACACAAACGGATGAGATGTCAGTaGAGGTATGGCTCTAGGGTCCAACGAAACTCCCTT +
Preference number: 3 (lower is better)
Translates to: SSFWKHKRMRCQ*RYGSRVQRNSL
Trigger: AAGGGAGTTTCGTTGGACCCTAGAGCCATACCTTCACTGACATCTCATCCGTTTGTGTTTCCAAAAGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
3UTR TCA 72 bp GCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTaGAGCGTATACAGCGCTGTTGTCAGAACAACTCAT +
Preference number: 3 (lower is better)
Translates to: AFMCWPWTMWKN*SVYSAVVRTTH
Trigger: ATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
3UTR TCA 72 bp AGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATaGGATGTCAGTGAAGGTATGGCTCTAGGGTCCAAC +
Preference number: 3 (lower is better)
Translates to: RPVKAAFGNTNG*DVSEGMALGSN
Trigger: GTTGGACCCTAGAGCCATACCTTCACTGACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
3UTR GCA 72 bp AAGACAATTTATGCTGTGAATCAGGGGTACTTCTCGTaGCACAGTCCTACGCCCTCAAAGATGAATCCTATT +
Preference number: 3 (lower is better)
Translates to: KTIYAVNQGYFS*HSPTPSKMNPI
Trigger: AATAGGATTCATCTTTGAGGGCGTAGGACTGTGGCACGAGAAGTACCCCTGATTCACAGCATAAATTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR GCA 72 bp AAAGGTTTCACTAGCTGTTACTTTTCTAAAGTCCCTTaGCCTGTGTTACTTTACCCAGACGCCTCTGCTCTT +
Preference number: 3 (lower is better)
Translates to: KGFTSCYFSKVP*PVLLYPDASAL
Trigger: AAGAGCAGAGGCGTCTGGGTAAAGTAACACAGGGCAAGGGACTTTAGAAAAGTAACAGCTAGTGAAACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CCA 72 bp TCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTaGACCAACAAAACTCCTGATTATTCAAATCAAGGA +
Preference number: 3 (lower is better)
Translates to: SRDTEELLRRRN*TNKTPDYSNQG
Trigger: TCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
3UTR-3UTR CAA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGGACTTTACACAAGTCTaGTTCCACGTTCAAGGACAA +
Preference number: 3 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQDFTQV*FHVQGQ
Trigger: TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTC...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGGCCTTCCAGCCGTCCTaGTCGGACCCCGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRAFQPS*SDPAGG
Trigger: GCCCCCAGCGGGGTCCGAGCAGGACGGCTGGAAGGC...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGAGGCCTGCGAGGCGGTaGCAGCGTCGGAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRRPARR*QRRRPS
Trigger: CGAGGGCCTCCGACGCTGGCACCGCCTCGCAGGCCT...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGGGGTGGCGGCTCCAGTaGGTCAGCCTCCGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRGWRLQ*VSLRVP
Trigger: GGGGACGCGGAGGCTGACCCACTGGAGCCGCCACCC...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCCTGTCCGGGCGCACTaGAGGAGAGCGCGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRPVRAH*RRARRA
Trigger: CGCCCTCCGCGCTCTCCTCCAGTGCGCCCGGACAGG...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGAGGCCTGCGAGGCGGTaGCAGCGTCGGAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKRPARR*QRRRPS
Trigger: CGAGGGCCTCCGACGCTGGCACCGCCTCGCAGGCCT...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCCTCCCTGGGCCCCGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATGCGGTGTGGGGAACCCGGTaGCCGGCATGCGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: ASLGPVTAQCGEPGARHAVWGTR*PACAGA
Trigger: AGCCCCGGCGCATGCCGGGCACCGGGTTCCCCACAC...CGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAGGGAGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGCGCTCAGTGCGCTTaGGCTGCCTCCCACTGCGCC +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRRAQCA*AASHCA
Trigger: GGCGCAGTGGGAGGCAGCCCAAGCGCACTGAGCGCG...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGCAGGCATGCTCCTCCTaGCGCGGCGCCGCGCAATGG +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKQACSS*RGAAQW
Trigger: CCATTGCGCGGCGCCGCGGCAGGAGGAGCATGCCTG...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCTCTCACCGTCGTGCTaGAGCGGGAAGCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRLSPSC*SGKPGC
Trigger: GCAGCCCGGCTTCCCGCTGCAGCACGACGGTGAGAG...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGTCCCTCTCACCGTCGTaGTGCAGCGGGAAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRSLSPS*CSGKPG
Trigger: GCCCGGCTTCCCGCTGCAGCACGACGGTGAGAGGGA...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGCTCGGTCCCGCTCTCTaGTCCGGGACCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKLGPAL*SGTGPG
Trigger: ACCGGGACCGGTCCCGGAGCAGAGAGCGGGACCGAG...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCCTCCCTGGGCCCCGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATGCGCCTCTGCCCCGGGGCTaGACCTGCACAGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: ASLGPVTAQCGEPGARHAPLPRG*TCTASP
Trigger: AGGGCTGGCTGTGCAGGTGCAGCCCCGGGGCAGAGG...CGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAGGGAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCCGGTCCGGCCTGCCTaGCAGCTGAAGCACCACTCG +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRPVRPA*QLKHHS
Trigger: CGAGTGGTGCTTCAGCTGCCAGGCAGGCCGGACCGG...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGGGGGAGGGCTCGGGATaGCCATCTCCTGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRGEGSG*PSPGGP
Trigger: TGGGCCTCCAGGAGATGGCCATCCCGAGCCCTCCCC...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
74% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGGCTCCAGCAGGGGCCTaGGGCCCGGCTTCATCACCT +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRAPAGA*GPASSP
Trigger: AGGTGATGAAGCCGGGCCCCAGGCCCCTGCTGGAGC...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGGGCCTGCCTGGCAGCTaGAGCACCACTCGATGGGGT +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRGLPGS*STTRWG
Trigger: ACCCCATCGAGTGGTGCTTCAGCTGCCAGGCAGGCC...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGTCAGTGCGCTTGGGCTaGCTCCCACTGCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKSVRLG*LPLRRR
Trigger: CCTGCGGCGCAGTGGGAGGCAGCCCAAGCGCACTGA...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGAGCCCCAAGGCGTCCTaGGGCTGGCGAGGCCATTGG +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKSPKAS*GWRGHW
Trigger: CCAATGGCCTCGCCAGCCCCAGGACGCCTTGGGGCT...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGTGCCGGGGGTCCCTGTaGTTTGACGCCTGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKCRGSL*FDAWLA
Trigger: CGCCAGCCAGGCGTCAAACCACAGGGACCCCCGGCA...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGTGGAGGAAGCTGCCGTaGAGGCTGCCGCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRWRKLP*RLPLLL
Trigger: CAACAGCAGCGGCAGCCTCCACGGCAGCTTCCTCCA...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGAGGGGCTGTTTTCTTTaGGGCTGCCATGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRRGCFL*GCHGCR
Trigger: GCGGCAGCCATGGCAGCCTCAAAGAAAACAGCCCCT...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGCCTCGCTCCACAAGCTaGGTGTCGAAGGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKPRSTS*VSKALS
Trigger: GGAGAGGGCCTTCGACACTCAGCTTGTGGAGCGAGG...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGGCCTGGCCCTGGAAGTaGAATCGCGAAGGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKAWPWK*NREGVC
Trigger: GCAGACCCCTTCGCGATTTCACTTCCAGGGCCAGGC...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp CTGGGCCCCGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATGCGCCGGGGGAGGACAGGGTCCGCTaGGACAGGGGAAACATGCCA +
Preference number: 4 (lower is better)
Translates to: LGPVTAQCGEPGARHAPGEDRVR*DRGNMP
Trigger: TGGCATGTTTCCCCTGTCTCAGCGGACCCTGTCCTC...CCCCGGCGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGTGCTTCCTTCCCGAGTaGTTCACTCCGCGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRCFLPE*FTPRRD
Trigger: GTCCCTGCGCGGAGTGAAGCACTCGGGAAGGAAGCA...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGTAGTCCACCAAACTaGAGGGGTGCAGGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRRSPPN*RGAGAL
Trigger: AAGGGCGCCTGCACCCCTGCAGTTTGGTGGACTACG...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CTGGGCCCCGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATGCGCCGGGGCTCAGGTGTGGCCTGTaGTGTCCAAGGGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LGPVTAQCGEPGARHAPGLRCGL*CPRASG
Trigger: CCCAGAAGCCCTTGGACAGCACAGGCCACACCTGAG...CCCCGGCGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CTGGGCCCCGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATGCGCCGGGGCTGAGTTACAGAGAGTaGCCCCACTGCGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LGPVTAQCGEPGARHAPGLSYRE*PHCGAE
Trigger: CTCTGCCCCGCAGTGGGGGCACTCTCTGTAACTCAG...CCCCGGCGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGGGTAGCGGAGAGCCATaGCCTCTTGGGGATGGTGCC +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKGSGEP*PLGDGA
Trigger: GGCACCATCCCCAAGAGGCCATGGCTCTCCGCTACC...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGAGGATGGGGCCCTCTTaGGCCCACGAAATGACCAGG +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRRMGPS*AHEMTR
Trigger: CCTGGTCATTTCGTGGGCCCAAGAGGGCCCCATCCT...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CTGGGCCCCGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATGCGCCGGGGCCATCCGGGAGGTGCTaGGAGACCTGTCCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LGPVTAQCGEPGARHAPGPSGRC*ETCPFP
Trigger: AGGGAAAGGACAGGTCTCCCAGCACCTCCCGGATGG...CCCCGGCGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGGCTGTGGAAGCAGACTaGGGGCCGCTTCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKAVEAD*GPLLVS
Trigger: TGAGACCAGAAGCGGCCCCCAGTCTGCTTCCACAGC...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGAGCCAGGGAACTTCTTaGAGGCAGCCGTTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKSQGTS*RQPLPL
Trigger: CAGCGGCAACGGCTGCCTCCAAGAAGTTCCCTGGCT...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGTCCTCTGTGGCGGGGTaGAAGCGGATCAGACAGAGC +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKSSVAG*KRIRQS
Trigger: GCTCTGTCTGATCCGCTTCCACCCCGCCACAGAGGA...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGCCAGGGGGAAGAGGCTaGCTCTTTTTCCTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKPGGRG*LFFLRD
Trigger: GTCCCGGAGGAAAAAGAGCCAGCCTCTTCCCCCTGG...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGCCAGCGGCTTCTCTTTaGGCCCCACGTCAAACCGCT +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKPAASL*APRQTA
Trigger: AGCGGTTTGACGTGGGGCCCAAAGAGAAGCCGCTGG...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CTGGGCCCCGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATGCGCCGGGGCTGGTCACGTGGAGCTaGCCAGAGCTCTTCACAAGC +
Preference number: 4 (lower is better)
Translates to: LGPVTAQCGEPGARHAPGLVTWS*PELFTS
Trigger: GCTTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAG...CCCCGGCGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCAGGCTCCTCATCTTTaGTGTCCTGAGCCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRQAPHL*CPEPPF
Trigger: GAAAGGCGGCTCAGGACATCAAAGATGAGGAGCCTG...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGCATCACCTCATCAGCTaGATCCGGAGCTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKHHLIS*IRSWVR
Trigger: CCTGACCCAGCTCCGGATTCAGCTGATGAGGTGATG...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GTGGGCGAGTGTGACGTTCCCCCAGCTGGTCGCGGAGCTGACAGTGTGGGTGGTCCCGCCGAGGCCTGGTaGCAGGGACAGAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: VGECDVPPAGRGADSVGGPAEAW*QGQRAL
Trigger: CAGTGCCCTCTGTCCCTGTCACCAGGCCTCGGCGGG...ACCACCCACACTGTCAGCTCCGCGACCAGCTGGGGGAACGTCACACTCGCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CTGGGCCCCGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATGCGCCGGGGATCCAGCTACTGCTGTaGACTGCATGGCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LGPVTAQCGEPGARHAPGIQLLL*TAWLLR
Trigger: CCTCAGGAGCCATGCAGTTCACAGCAGTAGCTGGAT...CCCCGGCGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGTCTAGCATCTTCTGTTaGTCCACCAGGGAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRSSIFC*STREGV
Trigger: GACGCCCTCCCTGGTGGAGCAACAGAAGATGCTAGA...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGGGCTTGTCTGCAGACTaGTGCTCTTGCTGGAACAGC +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRGLSAD*CSCWNS
Trigger: GCTGTTCCAGCAAGAGCAGCAGTCTGCAGACAAGCC...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GTGGGCGAGTGTGACGTTCCCCCAGCTGGTCGCGGAGCTGACAGTGTGGGTGGTACCCGGTGCCCGGCATaGGCCGGGGCTCGCTCAACA +
Preference number: 4 (lower is better)
Translates to: VGECDVPPAGRGADSVGGTRCPA*AGARST
Trigger: TGTTGAGCGAGCCCCGGCGCATGCCGGGCACCGGGT...ACCACCCACACTGTCAGCTCCGCGACCAGCTGGGGGAACGTCACACTCGCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp GCCTCCCTGGGCCCCGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATGCGCCTTCAGGCCTGTGCTaGATGTGCCGCAGAGAACTG +
Preference number: 4 (lower is better)
Translates to: ASLGPVTAQCGEPGARHAPSGLC*MCRREL
Trigger: CAGTTCTCTGCGGCACATGCAGCACAGGCCTGAAGG...CGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAGGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGTCTTTGAGGCTGCCATaGCTGCCGCTTTCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKSLRLP*LPLSPR
Trigger: CCGAGGAGAAAGCGGCAGCCATGGCAGCCTCAAAGA...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGCCGACTGCGGGACTGTaGCTACTTTTGGATAGGCCG +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKPTAGL*LLLDRP
Trigger: CGGCCTATCCAAAAGTAGCCACAGTCCCGCAGTCGG...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGGGACGACTTTGGTGGTaGAGACATCAAGGCGTCCGA +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRGRLWW*RHQGVR
Trigger: TCGGACGCCTTGATGTCTCCACCACCAAAGTCGTCC...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCCGCCGCAAGGCGGTGTaGGCAGCAGCACCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTRRKAV*AAAPSG
Trigger: CCCGGAGGGTGCTGCTGCCCACACCGCCTTGCGGCG...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
3UTR CAA 72 bp TCCCCGTCAGGCGGCGTCGTGGCCTCAGCAAGTGCCTaGGTGGGCGAGTGTGACGTTCCCCCAGCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: SPSGGVVASASA*VGECDVPPAGR
Trigger: GCGACCAGCTGGGGGAACGTCACACTCGCCCACCAAGGCACTTGCTGAGGCCACGACGCCGCCTGACGGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGTCATCTTTGATGTCCTaGGCCGCCTTTCCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRSSLMS*AAFPSN
Trigger: GTTGGAGGGAAAGGCGGCTCAGGACATCAAAGATGA...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GCCTCCCTGGGCCCCGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATGCGCAAGTAATCAGTACGTaGAGCGGGCCGAGTACCCGA +
Preference number: 4 (lower is better)
Translates to: ASLGPVTAQCGEPGARHAQVIST*SGPSTR
Trigger: TCGGGTACTCGGCCCGCTTCACGTACTGATTACTTG...CGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAGGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp GTGGGCGAGTGTGACGTTCCCCCAGCTGGTCGCGGAGCTGACAGTGTGGGTGGTCTTGGAGGCAGCCGTTaGCGCTGCAGGTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: VGECDVPPAGRGADSVGGLGGSR*RCRCRS
Trigger: GGACCGGCACCTGCAGCGGCAACGGCTGCCTCCAAG...ACCACCCACACTGTCAGCTCCGCGACCAGCTGGGGGAACGTCACACTCGCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGACCAAACTGCAGGGGTaGAGGCGCCCTTTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKTKLQG*RRPLVC
Trigger: ACAAACCAAAGGGCGCCTGCACCCCTGCAGTTTGGT...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGAACAGAAGGTACCACTaGCTTCCTTACGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRNRRYH*LPYGSH
Trigger: GTGGGAGCCGTAAGGAAGCCAGTGGTACCTTCTGTT...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGCGCGGTGCTGACTGGTaGTGTCTTTCAACATGCTGC +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKRGADW*CLSTCC
Trigger: GCAGCATGTTGAAAGACACCACCAGTCAGCACCGCG...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCCTCCCTGGGCCCCGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATGCGCGCGGTGCTGACTGGTaGTGTCTTTCAACATGCTGC +
Preference number: 4 (lower is better)
Translates to: ASLGPVTAQCGEPGARHARGADW*CLSTCC
Trigger: GCAGCATGTTGAAAGACACCACCAGTCAGCACCGCG...CGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAGGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGGACTGTGGCTACTTTTaGATAGGCCGGAACGTCCGC +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKDCGYF*IGRNVR
Trigger: GCGGACGTTCCGGCCTATCCAAAAGTAGCCACAGTC...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGGGAACAGCTCTGCCTTaGGCAAGGACGACTTTGGTG +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKGTALP*ARTTLV
Trigger: CACCAAAGTCGTCCTTGCCCAAGGCAGAGCTGTTCC...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCAGCTGTCTCCAACCGTaGCGGGGCGGGTGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTSCLQP*RGGCPP
Trigger: GGGAGGGCACCCGCCCCGCCACGGTTGGAGACAGCT...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCTCCGAATCTGGCTaGCGGAGGCCCTCGTGGCCC +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTGSESG*RRPSWP
Trigger: GGGCCACGAGGGCCTCCGCCAGCCAGATTCGGAGCC...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCCCGAACGCCGCGGAGTaGGCGGACGGCCACCGAGAT +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTPNAAE*ADGHRD
Trigger: ATCTCGGTGGCCGTCCGCCCACTCCGCGGCGTTCGG...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395343.6
CDS-3UTR TCA 90 bp GCCTCCCTGGGCCCCGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATGCGTCGCTGCGGCGTGTTTaGGGATACAGTCATTACTGC +
Preference number: 4 (lower is better)
Translates to: ASLGPVTAQCGEPGARHASLRRV*GYSHYC
Trigger: GCAGTAATGACTGTATCCTCAAACACGCCGCAGCGA...CGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAGGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGTGCCGGTCCGGCCTaGCTGGCAGCTGAAGCACCA +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTGAGPA*LAAEAP
Trigger: TGGTGCTTCAGCTGCCAGGCAGGCCGGACCGGCACC...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCCAAGTCAAGTAATCAGTACGTGAAGCGGGCCGAGTACCCGATGGCCTGGCCCGGCAGCCGTTGCCGCTaGAGGTGCCGGTCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: AKSSNQYVKRAEYPMAWPGSRCR*RCRSGL
Trigger: CAGGCCGGACCGGCACCTGCAGCGGCAACGGCTGCC...GGGCCAGGCCATCGGGTACTCGGCCCGCTTCACGTACTGATTACTTGACTTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGATTTGGCTGCGATGGTaGAGCACTCATAGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKIWLRW*STHSPK
Trigger: CTTGGGGCTATGAGTGCTGCACCATCGCAGCCAAAT...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGCCAAACTGTCTTCGGTaGGATCCTCCCACCAATGTG +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKPNCLR*DPPTNV
Trigger: CACATTGGTGGGAGGATCGCACCGAAGACAGTTTGG...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGTTCAAATTGGGATGGTaGCACTCCTCGTGGTCCACC +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKFKLGW*HSSWST
Trigger: GGTGGACCACGAGGAGTGGCACCATCCCAATTTGAA...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGTCAAACCGCTCTCTCTaGCTCCCTTCGAAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKSNRSL*LPSKVW
Trigger: CCAGACTTTCGAAGGGAGGCAGAGAGAGCGGTTTGA...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAACGCGCTCAGTGCGCTTaGGCTGCCTCCCACTGCGCC +
Preference number: 4 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQRAQCA*AASHCA
Trigger: GGCGCAGTGGGAGGCAGCCCAAGCGCACTGAGCGCG...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CTGGGCCCCGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATGCGCCGGGGCGCATTTCGGAAGACTaGGCTTCTCTGGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: LGPVTAQCGEPGARHAPGRISED*ASLASS
Trigger: AGATGAAGCCAGAGAAGCCCAGTCTTCCGAAATGCG...CCCCGGCGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GCCTCCCTGGGCCCCGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATGCGCATCACAGATCTCGCTaGCCTCTCTTTCCACGTGGA +
Preference number: 4 (lower is better)
Translates to: ASLGPVTAQCGEPGARHAHHRSR*PLFPRG
Trigger: TCCACGTGGAAAGAGAGGCCAGCGAGATCTGTGATG...CGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAGGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGCGGCACACATCCTGTTaGGCAGGTCATCAACAGTCA +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKRHTSC*AGHQQS
Trigger: TGACTGTTGATGACCTGCCCAACAGGATGTGTGCCG...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCTGCCGGGGGTCCCTGTaGTTTGACGCCTGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTCRGSL*FDAWLA
Trigger: CGCCAGCCAGGCGTCAAACCACAGGGACCCCCGGCA...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCCACTTTCTGTCCTGGTaGGGGGAGCGGGGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTHFLSW*GERGGA
Trigger: GGCACCGCCCCGCTCCCCCCACCAGGACAGAAAGTG...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGTTCTTCAAATTGGGATaGTGCCACTCCTCGTGGTCC +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRFFKLG*CHSSWS
Trigger: GGACCACGAGGAGTGGCACCATCCCAATTTGAAGAA...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGGAAATGACCAGGGGGTaGTCCTCTCTGACCTCCAAA +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKEMTRG*SSLTSK
Trigger: TTTGGAGGTCAGAGAGGACCACCCCCTGGTCATTTC...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGGGTGCAGGCGCCCTTTaGTTTGTGAATCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKGAGAL*FVNLGG
Trigger: ACCACCAAGATTCACAAACCAAAGGGCGCCTGCACC...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCCGAACCCCGGGCAGGTaGAAGGGTCCCTCTCACCGT +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTRTPGR*KGPSHR
Trigger: ACGGTGAGAGGGACCCTTTCACCTGCCCGGGGTTCG...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAATCAGTGCGCTTGGGCTaGCTCCCACTGCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQSVRLG*LPLRRR
Trigger: CCTGCGGCGCAGTGGGAGGCAGCCCAAGCGCACTGA...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CTGTCCAAGGGCTTCTGGGCTATCTCCGTGAGGACAGGGTCCGCTGAGACAGGGGCTCCACGCGCTCAGTaGGCTTGGGCTGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LSKGFWAISVRTGSAETGAPRAQ*AWAASH
Trigger: GTGGGAGGCAGCCCAAGCGCACTGAGCGCGTGGAGC...CCCTGTCTCAGCGGACCCTGTCCTCACGGAGATAGCCCAGAAGCCCTTGGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAAGGTGCCGGTCCGGCCTaGCTGGCAGCTGAAGCACCA +
Preference number: 4 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQGAGPA*LAAEAP
Trigger: TGGTGCTTCAGCTGCCAGGCAGGCCGGACCGGCACC...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTGAGGGTGCTGCGGGGGCTGTCTGGGCGGGATaGTGCGGAGGCCACGGCTGT +
Preference number: 4 (lower is better)
Translates to: QGDPATAVNCMAPEGAAGAVWAG*CGGHGC
Trigger: ACAGCCGTGGCCTCCGCAGCATCCCGCCCAGACAGC...CCCCGCAGCACCCTCAGGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGTTGTCTGCAGACTGCTaGTCTTGCTGGAACAGCTCT +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKLSADC*SCWNSS
Trigger: AGAGCTGTTCCAGCAAGAGCAGCAGTCTGCAGACAA...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTGAGGGTGCTGCGGGGGACAGGCCGGGACTCTaGGACCCCAAGTCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: QGDPATAVNCMAPEGAAGDRPGL*DPKSLR
Trigger: CCGCAGGGACTTGGGGTCGCAGAGTCCCGGCCTGTC...CCCCGCAGCACCCTCAGGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCCCAACCCGTAGTGCGTaGTCGCCGCGAGGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTPTRSA*SPRGEF
Trigger: GAACTCCCCTCGCGGCGACCACGCACTACGGGTTGG...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266070.8
CDS-3UTR CCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCCTCTGGCCTCCGAACTaGAAAGGCGCGCCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTLWPPN*KGAPPL
Trigger: CAGAGGCGGCGCGCCTTTCCAGTTCGGAGGCCAGAG...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAACGTCACTGCCCAGTGTaGGGAACCCGGTGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQRHCPV*GTRCPA
Trigger: TGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACG...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGTGCAAATTTTACAGTTaGGATCGAAGAGGTGTGCGC +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRCKFYS*DRRGVR
Trigger: GCGCACACCTCTTCGATCTCAACTGTAAAATTTGCA...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCACGGCTGTGCATaGACTGCTTGGAGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTGHGCA*TAWSGP
Trigger: AGGACCGCTCCAAGCAGTTCATGCACAGCCGTGGCC...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGCTTTCCAAATGGTGCTaGGTCGAGACAAAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKLSKWC*VETKRG
Trigger: CCCTCTTTTTGTCTCGACTCAGCACCATTTGGAAAG...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GCCTCCCTGGGCCCCGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATGCGCTTTCCAAATGGTGCTaGGTCGAGACAAAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: ASLGPVTAQCGEPGARHALSKWC*VETKRG
Trigger: CCCTCTTTTTGTCTCGACTCAGCACCATTTGGAAAG...CGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAGGGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGGGCCGTGAAGCCCTaGCATCCCCAAAGCATGAGG +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTGAVKP*HPQSMR
Trigger: CCTCATGCTTTGGGGATGTCAGGGCTTCACGGCCCC...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAACTTGGTGGGCGAGTGTaGCGTTCCCCCAGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQLGGRV*RSPSWS
Trigger: CGACCAGCTGGGGGAACGTCACACTCGCCCACCAAG...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGAAACTTCATTGTCGCTaGGGCGTGTTTGAGGATACA +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRKLHCR*GVFEDT
Trigger: TGTATCCTCAAACACGCCGCAGCGACAATGAAGTTT...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAATCGGGGATGGCCTCCTaGCTGGGGGCCGTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQSGMAS*LGAVFL
Trigger: CAAGAAGACGGCCCCCAGGCAGGAGGCCATCCCCGA...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGTGGCTTTTTAATGGCTaGTGTGGCTGCTGCCACATT +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKWLFNG*CGCCHI
Trigger: AATGTGGCAGCAGCCACACCAGCCATTAAAAAGCCA...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GACAGGGGAAACATGCCAGGACCTAGCCTTACACACACACACGCGCGCACATGCCCTCCAGATCGGGGATaGCCTCCTGCCTGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: DRGNMPGPSLTHTHARTCPPDRG*PPAWGP
Trigger: CGGCCCCCAGGCAGGAGGCCATCCCCGATCTGGAGG...GCATGTGCGCGCGTGTGTGTGTGTAAGGCTAGGTCCTGGCATGTTTCCCCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGATGGAACAGGGTCCTaGGCGCTCAGCGGGATCAGG +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTDGTGS*ALSGIR
Trigger: CCTGATCCCGCTGAGCGCCCAGGACCCTGTTCCATC...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGAGCAGAGTGGATACTTaGAGGGCTTCTTTTCCGACT +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKSRVDT*RASFPT
Trigger: AGTCGGAAAAGAAGCCCTCCAAGTATCCACTCTGCT...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAAAGCCAGCCCTTGCTGTaGGGAGAATGGAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQSQPLL*GEWRRR
Trigger: GCGGCGCCTCCATTCTCCCCACAGCAAGGGCTGGCT...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GTGGGCGAGTGTGACGTTCCCCCAGCTGGTCGCGGAGCTGACAGTGTGGGTGGTGCTGTGGAATGGAGCTaGGTCCTGCAGACCCTCACC +
Preference number: 4 (lower is better)
Translates to: VGECDVPPAGRGADSVGGAVEWS*VLQTLT
Trigger: GGTGAGGGTCTGCAGGACCCAGCTCCATTCCACAGC...ACCACCCACACTGTCAGCTCCGCGACCAGCTGGGGGAACGTCACACTCGCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CTGTCCAAGGGCTTCTGGGCTATCTCCGTGAGGACAGGGTCCGCTGAGACAGGGTGGGACACAACCCCCTaGTCGTTCTCGGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LSKGFWAISVRTGSAETGWDTTP*SFSGSC
Trigger: GCAGGAGCCCGAGAACGATCAGGGGGTTGTGTCCCA...CCCTGTCTCAGCGGACCCTGTCCTCACGGAGATAGCCCAGAAGCCCTTGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CTGACCAGTGGGTCTTCACAGGTGCGGAGAGGCCAGCTTCTCGGTCTTCACCTCGGCCTGCCTGGCAGCTaGAGCACCACTCGATGGGGT +
Preference number: 4 (lower is better)
Translates to: LTSGSSQVRRGQLLGLHLGLPGS*STTRWG
Trigger: ACCCCATCGAGTGGTGCTTCAGCTGCCAGGCAGGCC...GAGGTGAAGACCGAGAAGCTGGCCTCTCCGCACCTGTGAAGACCCACTGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGATTTTGCCGAATTTGTaGATTTGGCTGCGATGGTGC +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKILPNL*IWLRWC
Trigger: GCACCATCGCAGCCAAATTCACAAATTCGGCAAAAT...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAAAGCTGGTCGCGGAGCTaGCAGTGTGGGTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQSWSRS*QCGWLV
Trigger: CACCAACCACCCACACTGTCAGCTCCGCGACCAGCT...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp GCGTCCTGCGGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTAGCCTCCGCGTCCCCTaGGCCCTCTCGCTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: ASCGQDSVLGVNSLTVGPSLRVP*ALSLGD
Trigger: ATCGCCAAGCGAGAGGGCGCAGGGGACGCGGAGGCT...AGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACCGCAGGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGTCAGTGCGCTTGGGCTaGCTCCCACTGCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GGCGVPGSVAMQSDWDEESVRLG*LPLRRR
Trigger: CCTGCGGCGCAGTGGGAGGCAGCCCAAGCGCACTGA...CTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GCCTCCCTGGGCCCCGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATGCGGCACTTGCAGAATGGTaGAGTTTGGGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: ASLGPVTAQCGEPGARHAALAEW*SLGRYS
Trigger: ACTATATCTGCCCAAACTGCACCATTCTGCAAGTGC...CGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAGGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCCACGAGGTTTCTAGGTaGAGGCTGCTTGCCCACCGC +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTHEVSR*RLLAHR
Trigger: GCGGTGGGCAAGCAGCCTGCACCTAGAAACCTCGTG...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCCGGCTGTGCATGAACTaGTTGGAGCGGTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTRLCMN*LERSWG
Trigger: ACCCCAGGACCGCTCCAAGCAGTTCATGCACAGCCG...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CTGTCCAAGGGCTTCTGGGCTATCTCCGTGAGGACAGGGTCCGCTGAGACAGGGCGGAGGCCACGGCTGTaGATGAACTGCTTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LSKGFWAISVRTGSAETGRRPRL*MNCLER
Trigger: CCGCTCCAAGCAGTTCATGCACAGCCGTGGCCTCCG...CCCTGTCTCAGCGGACCCTGTCCTCACGGAGATAGCCCAGAAGCCCTTGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp GACAGGGGAAACATGCCAGGACCTAGCCTTACACACACACACGCGCGCACATGCGTCTGGGCGGGATGCTaGGGAGGCCACGGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: DRGNMPGPSLTHTHARTCVWAGC*GGHGCA
Trigger: TGCACAGCCGTGGCCTCCGCAGCATCCCGCCCAGAC...GCATGTGCGCGCGTGTGTGTGTGTAAGGCTAGGTCCTGGCATGTTTCCCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAGCGGGAAGCCGGGCTaGAGGGCGCCGCAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRSGKPG*RAPQGG
Trigger: ACCGCCTTGCGGCGCCCTGCAGCCCGGCTTCCCGCT...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCAGGGTGAGGGGCCTCTaGTGTCCCCATAAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTRVRGL*CPHKEV
Trigger: CACCTCCTTATGGGGACAGCAGAGGCCCCTCACCCT...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GTGGGCGAGTGTGACGTTCCCCCAGCTGGTCGCGGAGCTGACAGTGTGGGTGGTCAGGGGTACTTCTCGTaGCACAGTCCTACGCCCTCA +
Preference number: 4 (lower is better)
Translates to: VGECDVPPAGRGADSVGGQGYFS*HSPTPS
Trigger: TGAGGGCGTAGGACTGTGGCACGAGAAGTACCCCTG...ACCACCCACACTGTCAGCTCCGCGACCAGCTGGGGGAACGTCACACTCGCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTGCACCTGGGCCCCGTCACTaGCCAGTGTGGGGAACCCGG +
Preference number: 4 (lower is better)
Translates to: LQRAVFPPALYLGRTDCAPGPRH*PVWGTR
Trigger: CCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAGG...TGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGCGCGGCGCCGCGCAATaGTCAGGAACTGCTCCACGC +
Preference number: 4 (lower is better)
Translates to: GGCGVPGSVAMQSDWDEERGAAQ*SGTAPR
Trigger: GCGTGGAGCAGTTCCTGACCATTGCGCGGCGCCGCG...CTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGGCCTCTATCACAGGCTaGAAGATCTTGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKASITG*KILSFF
Trigger: GAAGAAACTCAAGATCTTCCAGCCTGTGATAGAGGC...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CTGTCCAAGGGCTTCTGGGCTATCTCCGTGAGGACAGGGTCCGCTGAGACAGGGGGTAGCGGAGAGCCATaGCCTCTTGGGGATGGTGCC +
Preference number: 4 (lower is better)
Translates to: LSKGFWAISVRTGSAETGGSGEP*PLGDGA
Trigger: GGCACCATCCCCAAGAGGCCATGGCTCTCCGCTACC...CCCTGTCTCAGCGGACCCTGTCCTCACGGAGATAGCCCAGAAGCCCTTGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCCCTCCTCTTCCTCTGTaGCGGGGTGGAAGCGGATCA +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTPPLPL*RGGSGS
Trigger: TGATCCGCTTCCACCCCGCCACAGAGGAAGAGGAGG...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGTCCTTCAAACTGGTTaGGATGAGGGCCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTVLQTG*DEGPGQ
Trigger: CTGCCCGGGGCCCTCATCCCAACCAGTTTGAAGGAC...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGCTCAGAAGGCGAAACTaGACCAACAAAACTCCTGAT +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKLRRRN*TNKTPD
Trigger: ATCAGGAGTTTTGTTGGTCCAGTTTCGCCTTCTGAG...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTGAGGGTGCTGCGGGGGCTCCCAGAGAGCCCTaGGCTGGTCAGGACTCAGCA +
Preference number: 4 (lower is better)
Translates to: QGDPATAVNCMAPEGAAGAPREP*AGQDSA
Trigger: TGCTGAGTCCTGACCAGCCCAGGGCTCTCTGGGAGC...CCCCGCAGCACCCTCAGGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CTGTCCAAGGGCTTCTGGGCTATCTCCGTGAGGACAGGGTCCGCTGAGACAGGGGCTCCAGTAGGAACGTaGGCTGTGCCTGGGGCGACA +
Preference number: 4 (lower is better)
Translates to: LSKGFWAISVRTGSAETGAPVGT*AVPGAT
Trigger: TGTCGCCCCAGGCACAGCCCACGTTCCTACTGGAGC...CCCTGTCTCAGCGGACCCTGTCCTCACGGAGATAGCCCAGAAGCCCTTGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp GTGGGCGAGTGTGACGTTCCCCCAGCTGGTCGCGGAGCTGACAGTGTGGGTGGTTGGGGATGGTGCCCTTaGAACCTGAGGGTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: VGECDVPPAGRGADSVGGWGWCP*NLRVAF
Trigger: AAAAGCCACCCTCAGGTTTCAAGGGCACCATCCCCA...ACCACCCACACTGTCAGCTCCGCGACCAGCTGGGGGAACGTCACACTCGCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCTTTTAAGGAGCGTCTaGTATTTTGCCGAATTTGTG +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRLLRSV*YFAEFV
Trigger: CACAAATTCGGCAAAATATCAGACGCTCCTTAAAAG...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCAGGTGTGCGCGGTGCTaGCTGGTGGTGTCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTRCARC*LVVSFN
Trigger: GTTGAAAGACACCACCAGTCAGCACCGCGCACACCT...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCTCAAACTGGTTGGGATaGGGGCCCCGGGCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTSNWLG*GPRAVS
Trigger: TGAAACTGCCCGGGGCCCTCATCCCAACCAGTTTGA...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAAGACCTGAGGCCAAGATaGGCTGGTTGCAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQDLRPR*AGCRLW
Trigger: CCACAGCCTGCAACCAGCTCATCTTGGCCTCAGGTC...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CTGACCAGTGGGTCTTCACAGGTGCGGAGAGGCCAGCTTCTCGGTCTTCACCTCCCGGTAGGGAGGTGCTaGGGTGCTGCAGTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LTSGSSQVRRGQLLGLHLPVGRC*GAAVSA
Trigger: TGCAGACACTGCAGCACCTCAGCACCTCCCTACCGG...GAGGTGAAGACCGAGAAGCTGGCCTCTCCGCACCTGTGAAGACCCACTGGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAATGGCCTGGCCCGGGGTaGAGGCTGTTTAGTGACCAT +
Preference number: 4 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQWPGPG*RLFSDH
Trigger: ATGGTCACTAAACAGCCTTCACCCCGGGCCAGGCCA...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAAGCAATGGTCAGGAACTaGTCCACGCGCTCAGTGCGC +
Preference number: 4 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQAMVRN*STRSVR
Trigger: GCGCACTGAGCGCGTGGAGCAGTTCCTGACCATTGC...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGACAGGCATGCTCCTCCTaGCGCGGCGCCGCGCAATGG +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRQACSS*RGAAQW
Trigger: CCATTGCGCGGCGCCGCGGCAGGAGGAGCATGCCTG...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCCAAGTCAAGTAATCAGTACGTGAAGCGGGCCGAGTACCCGATGGCCTGGCCCAAGCGCTTTCCACGCTaGCCTCGGAGGCTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: AKSSNQYVKRAEYPMAWPKRFPR*PRRLSR
Trigger: CCGAGACAGCCTCCGAGGGCAGCGTGGAAAGCGCTT...GGGCCAGGCCATCGGGTACTCGGCCCGCTTCACGTACTGATTACTTGACTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGATTTGTGAATTTGGCTaGGATGGTGCAGCACTCATA +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKICEFG*DGAALI
Trigger: TATGAGTGCTGCACCATCGCAGCCAAATTCACAAAT...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGACGCAGGGTGGACGCCTaGAGGTCACGCCCACACCGG +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRRRVDA*RSRPHR
Trigger: CCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCG...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GTGGGCGAGTGTGACGTTCCCCCAGCTGGTCGCGGAGCTGACAGTGTGGGTGGTGGGAGATCCAGCTACTaGTGTGAACTGCATGGCTCC +
Preference number: 4 (lower is better)
Translates to: VGECDVPPAGRGADSVGGGRSSY*CELHGS
Trigger: GGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCC...ACCACCCACACTGTCAGCTCCGCGACCAGCTGGGGGAACGTCACACTCGCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp TCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGGGGTGGCGGCTCCAGTaGGTCAGCCTCCGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: SLTVGPMKQECVAFEVRMGWRLQ*VSLRVP
Trigger: GGGGACGCGGAGGCTGACCCACTGGAGCCGCCACCC...CATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACGGTAAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CAAGGACAAATGTCCTCAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCGGGTGGCGGCTCCAGTaGGTCAGCCTCCGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: QGQMSSGRSSYCCELHGSGWRLQ*VSLRVP
Trigger: GGGGACGCGGAGGCTGACCCACTGGAGCCGCCACCC...GGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTGAGGACATTTGTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GTTTCCCCTGAGGGCACAGCTGGGCACCTTCAGGCCTTCACTTGCTTAAGTGTGCGCGGCGCCGCGCAATaGTCAGGAACTGCTCCACGC +
Preference number: 4 (lower is better)
Translates to: VSPEGTAGHLQAFTCLSVRGAAQ*SGTAPR
Trigger: GCGTGGAGCAGTTCCTGACCATTGCGCGGCGCCGCG...CACACTTAAGCAAGTGAAGGCCTGAAGGTGCCCAGCTGTGCCCTCAGGGGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CTGACCAGTGGGTCTTCACAGGTGCGGAGAGGCCAGCTTCTCGGTCTTCACCTCTGGCGGGGCAGGACGTaGGCTCACCAGAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: LTSGSSQVRRGQLLGLHLWRGRT*AHQNPP
Trigger: TGGAGGATTCTGGTGAGCCCACGTCCTGCCCCGCCA...GAGGTGAAGACCGAGAAGCTGGCCTCTCCGCACCTGTGAAGACCCACTGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTGAGGGTGCTGCGGGGTTCCGCAGGCGACTCTaGATCCCTTTCAGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: QGDPATAVNCMAPEGAAGFRRRL*IPFRGL
Trigger: GAGGCCCCTGAAAGGGATCCAGAGTCGCCTGCGGAA...CCCCGCAGCACCCTCAGGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGAAGACTGGGCTTCTCTaGCTTCATCTTCATCTTTTC +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKKTGLL*LHLHLF
Trigger: GAAAAGATGAAGATGAAGCCAGAGAAGCCCAGTCTT...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGAAAAGAAGACTTCTTTaGCACGAGGTTTCTAGGTGC +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKKRRLL*HEVSRC
Trigger: GCACCTAGAAACCTCGTGCCAAAGAAGTCTTCTTTT...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTGCACCGGTCCGGCCTGCCTaGCAGCTGAAGCACCACTCG +
Preference number: 4 (lower is better)
Translates to: LQRAVFPPALYLGRTDCAPVRPA*QLKHHS
Trigger: CGAGTGGTGCTTCAGCTGCCAGGCAGGCCGGACCGG...TGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTGAGGGTGCTGCGGGGAGCCAGGGAACTTCTTaGAGGCAGCCGTTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: QGDPATAVNCMAPEGAAGSQGTS*RQPLPL
Trigger: CAGCGGCAACGGCTGCCTCCAAGAAGTTCCCTGGCT...CCCCGCAGCACCCTCAGGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CTGTCCAAGGGCTTCTGGGCTATCTCCGTGAGGACAGGGTCCGCTGAGACAGGGCCTCCTCTTCCTCTGTaGCGGGGTGGAAGCGGATCA +
Preference number: 4 (lower is better)
Translates to: LSKGFWAISVRTGSAETGPPLPL*RGGSGS
Trigger: TGATCCGCTTCCACCCCGCCACAGAGGAAGAGGAGG...CCCTGTCTCAGCGGACCCTGTCCTCACGGAGATAGCCCAGAAGCCCTTGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGACTGCTGCTCTTGCTaGAACAGCTCTGCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTDCCSC*NSSALG
Trigger: GCCCAAGGCAGAGCTGTTCCAGCAAGAGCAGCAGTC...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGACCCTCCGGGCAGGCCTaGCCGAGCTGTCTCCAACCG +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRPSGQA*PSCLQP
Trigger: CGGTTGGAGACAGCTCGGCCAGGCCTGCCCGGAGGG...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCTTGGTCCCGGGAAATTaGGGCCGTGAAGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTLVPGN*GREALT
Trigger: TGTCAGGGCTTCACGGCCCCAATTTCCCGGGACCAA...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGACCCGTAGCCGCAGGGTaGACGCCTGCAGGTCACGCC +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRPVAAG*TPAGHA
Trigger: GGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGG...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCCGAGACAGGGGTGGATGTaGCGTGCCGGGCAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: QRCCQNNSCADRGGCGVPRQGWM*RAGQCG
Trigger: GCCACACTGCCCGGCACGCCACATCCACCCCTGTCT...CGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GTGCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTATGTGCAGACAGGGGTaGATGTGGCGTGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: VQTGVDVACRAVWLCNQTMCRQG*MWRAGQ
Trigger: CTGCCCGGCACGCCACATCCACCCCTGTCTGCACAT...AGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp CTGACCAGTGGGTCTTCACAGGTGCGGAGAGGCCAGCTTCTCGGTCTTCACCTCAGGGGCTGTTTTCTTTaGGGCTGCCATGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LTSGSSQVRRGQLLGLHLRGCFL*GCHGCR
Trigger: GCGGCAGCCATGGCAGCCTCAAAGAAAACAGCCCCT...GAGGTGAAGACCGAGAAGCTGGCCTCTCCGCACCTGTGAAGACCCACTGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAAAGGTGTGCGCGGTGCTaGCTGGTGGTGTCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQRCARC*LVVSFN
Trigger: GTTGAAAGACACCACCAGTCAGCACCGCGCACACCT...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTGAGGGTGCTGCGGGGTGGGCTTCTGGGCACTaGGTCTTCTCTGACCTGAGG +
Preference number: 4 (lower is better)
Translates to: QGDPATAVNCMAPEGAAGWASGH*VFSDLR
Trigger: CCTCAGGTCAGAGAAGACTCAGTGCCCAGAAGCCCA...CCCCGCAGCACCCTCAGGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp TACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCTCAGTGCGCTTGGGCTaGCTCCCACTGCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: YSAVVRTTHVQTGVDVACSVRLG*LPLRRR
Trigger: CCTGCGGCGCAGTGGGAGGCAGCCCAAGCGCACTGA...GCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATCAGGCATGCTCCTCCTaGCGCGGCGCCGCGCAATGG +
Preference number: 4 (lower is better)
Translates to: LTYRGAYEAGVCGLRSSNQACSS*RGAAQW
Trigger: CCATTGCGCGGCGCCGCGGCAGGAGGAGCATGCCTG...ATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACGGTAAGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAACCAGGGAGACAGGCATaGTCCTCCTGCCGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEPGRQA*SSCRGA
Trigger: GGCGCCGCGGCAGGAGGAGCATGCCTGTCTCCCTGG...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCGTCCTGCGGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTAAGCGCTTTCCACGCTaGCCTCGGAGGCTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: ASCGQDSVLGVNSLTVGPKRFPR*PRRLSR
Trigger: CCGAGACAGCCTCCGAGGGCAGCGTGGAAAGCGCTT...AGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACCGCAGGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGAGGCTGGCGGCAAATaGAATACAGGGCGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: ADRGGCGVPGSVAMQSDWEAGGK*NTGRWG
Trigger: ACCCCAACGCCCTGTATTGCATTTGCCGCCAGCCTC...CCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGTCTTCGCTAGACTTCTaGTCTATTGTTCCTATACTT +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRSSLDF*SIVPIL
Trigger: AAGTATAGGAACAATAGAGCAGAAGTCTAGCGAAGA...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TCCTGGACATGGGCTCTGCTTCCCGCTGATGGTGCAGCCGGTGTCTGTGATCAGCCCACGACGGCGTGCTaGTCTCACAAGCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SWTWALLPADGAAGVCDQPTTAC*SHKLLP
Trigger: AGGAAGCAGCTTGTGAGAGCAGCACGCCGTCGTGGG...CTGATCACAGACACCGGCTGCACCATCAGCGGGAAGCAGAGCCCATGTCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGGAGCGTCTGATATTTTaGCGAATTTGTGAATTTGGC +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKERLIF*RICEFG
Trigger: GCCAAATTCACAAATTCGGCAAAATATCAGACGCTC...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CTGACCAGTGGGTCTTCACAGGTGCGGAGAGGCCAGCTTCTCGGTCTTCACCTCCGAGAAGCGGCGCTGTaGTCTTCTCAGGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: LTSGSSQVRRGQLLGLHLREAAL*SSQGQH
Trigger: GTGCTGTCCCTGAGAAGAGCACAGCGCCGCTTCTCG...GAGGTGAAGACCGAGAAGCTGGCCTCTCCGCACCTGTGAAGACCCACTGGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAGTCTGGGCGGGATGCTaGGGAGGCCACGGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRVWAGC*GGHGCA
Trigger: TGCACAGCCGTGGCCTCCGCAGCATCCCGCCCAGAC...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGACTCTCACCGTCGTGCTaGAGCGGGAAGCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRLSPSC*SGKPGC
Trigger: GCAGCCCGGCTTCCCGCTGCAGCACGACGGTGAGAG...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACGCGCTCTCGGTTCCTaGTCCGCTCCCGGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGRALGS*SAPGCG
Trigger: ACCGCAGCCGGGAGCGGAGCAGGAACCGAGAGCGCG...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAACTCGGTCCCGCTCTCTaGTCCGGGACCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGELGPAL*SGTGPG
Trigger: ACCGGGACCGGTCCCGGAGCAGAGAGCGGGACCGAG...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCCAAGTCAAGTAATCAGTACGTGAAGCGGGCCGAGTACCCGATGGCCTGGCCCTGTGCTCCTAACTCCTaGTCCCAGAGAGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: AKSSNQYVKRAEYPMAWPCAPNS*SQRALG
Trigger: GCCCAGGGCTCTCTGGGAGCAGGAGTTAGGAGCACA...GGGCCAGGCCATCGGGTACTCGGCCCGCTTCACGTACTGATTACTTGACTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp AGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGGCGTGACTCCAAGCTaGGCAGCACACGCTCACCCC +
Preference number: 4 (lower is better)
Translates to: SSYRGRCFLLPCTWGEQTGVTPS*AAHAHP
Trigger: GGGGTGAGCGTGTGCTGCGCAGCTTGGAGTCACGCC...AGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTGAGGGTGCTGCGGGGATCCCCAGGGGAAGATaGTCCCACATCAGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: QGDPATAVNCMAPEGAAGIPRGR*SHISAL
Trigger: CAGGGCACTGATGTGGGAGCATCTTCCCCTGGGGAT...CCCCGCAGCACCCTCAGGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGCGCGCTCAGTGCGCTTaGGCTGCCTCCCACTGCGCC +
Preference number: 4 (lower is better)
Translates to: GQDSVLGVNSLTVGPMKQRAQCA*AASHCA
Trigger: GGCGCAGTGGGAGGCAGCCCAAGCGCACTGAGCGCG...CTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp TGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGTGGCGGGGCAGGACGTaGGCTCACCAGAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: CQNNSCADRGGCGVPGSVWRGRT*AHQNPP
Trigger: TGGAGGATTCTGGTGAGCCCACGTCCTGCCCCGCCA...CACACTGCCCGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAAACTGGGGGCCGCTTCTaGTCTCAGAAGCGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQTGGRF*SQKRFP
Trigger: TGGAAAGCGCTTCTGAGACCAGAAGCGGCCCCCAGT...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGAGATACAAGTTCTTCTaGCTTCAGTCTCACAAGTTT +
Preference number: 4 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRRYKFF*LQSHKF
Trigger: AAACTTGTGAGACTGAAGCCAGAAGAACTTGTATCT...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCCGCGGTGCTGACTGGTaGTGTCTTTCAACATGCTGC +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTRGADW*CLSTCC
Trigger: GCAGCATGTTGAAAGACACCACCAGTCAGCACCGCG...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp ACCCTACAACCGTGCTCACCTGACAGCTCCAAGTTTGGAGATGAGCAGGGAGAGTGCTTGGAGCGGTCCTaGGGTCCCGGCCGGACACTG +
Preference number: 4 (lower is better)
Translates to: TLQPCSPDSSKFGDEQGECLERS*GPGRTL
Trigger: CAGTGTCCGGCCGGGACCCCAGGACCGCTCCAAGCA...CTCTCCCTGCTCATCTCCAAACTTGGAGCTGTCAGGTGAGCACGGTTGTAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CTGTCCAAGGGCTTCTGGGCTATCTCCGTGAGGACAGGGTCCGCTGAGACAGGGTCGGCACATCCTGTCTaGCTTCCACCATGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LSKGFWAISVRTGSAETGSAHPV*LPPCGC
Trigger: GCACCCACATGGTGGAAGCCAGACAGGATGTGCCGA...CCCTGTCTCAGCGGACCCTGTCCTCACGGAGATAGCCCAGAAGCCCTTGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GACAGGGGAAACATGCCAGGACCTAGCCTTACACACACACACGCGCGCACATGCGATGGAACAGGGTCCTaGGCGCTCAGCGGGATCAGG +
Preference number: 4 (lower is better)
Translates to: DRGNMPGPSLTHTHARTCDGTGS*ALSGIR
Trigger: CCTGATCCCGCTGAGCGCCCAGGACCCTGTTCCATC...GCATGTGCGCGCGTGTGTGTGTGTAAGGCTAGGTCCTGGCATGTTTCCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAACCTCACCGGTCTCAGTaGCCAGGCGCCTCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEPHRSQ*PGASPA
Trigger: GGCAGGCGAGGCGCCTGGCCACTGAGACCGGTGAGG...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGAACTGGCATGGGCGCCTaGCCCACGAGGCCACCCCTG +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGTGMGA*PTRPPL
Trigger: CAGGGGTGGCCTCGTGGGCCAGGCGCCCATGCCAGT...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCAGCGATATTCTCTTCTaGAAACGGAGGGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTSDILF*KRRGWP
Trigger: GGGCCAGCCCCTCCGTTTCCAGAAGAGAATATCGCT...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCCGATGTGCAGACAGGGGTaGATGTGGCGTGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: QRCCQNNSCADRGGCGVPMCRQG*MWRAGQ
Trigger: CTGCCCGGCACGCCACATCCACCCCTGTCTGCACAT...CGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTGAGGGTGCTGCGGGGCTTCCCGGTGTGTGCTaGCTCCCGAGTCTGTCTAGA +
Preference number: 4 (lower is better)
Translates to: QGDPATAVNCMAPEGAAGLPGVC*LPSLSR
Trigger: TCTAGACAGACTCGGGAGCCAGCACACACCGGGAAG...CCCCGCAGCACCCTCAGGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTGAGGGTGCTGCGGGGAGAGCACGTGGCCCCTaGAATCACCCTCAACCCTTG +
Preference number: 4 (lower is better)
Translates to: QGDPATAVNCMAPEGAAGRARGP*NHPQPL
Trigger: CAAGGGTTGAGGGTGATTCCAGGGGCCACGTGCTCT...CCCCGCAGCACCCTCAGGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GCCAAGTCAAGTAATCAGTACGTGAAGCGGGCCGAGTACCCGATGGCCTGGCCCCAGCAAGTGCCTTGGTaGGCGAGTGTGACGTTCCCC +
Preference number: 4 (lower is better)
Translates to: AKSSNQYVKRAEYPMAWPQQVPW*ASVTFP
Trigger: GGGGAACGTCACACTCGCCCACCAAGGCACTTGCTG...GGGCCAGGCCATCGGGTACTCGGCCCGCTTCACGTACTGATTACTTGACTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CTGACCAGTGGGTCTTCACAGGTGCGGAGAGGCCAGCTTCTCGGTCTTCACCTCGTGGAGAAGGTCACCTaGAACCAGGCCTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LTSGSSQVRRGQLLGLHLVEKVT*NQASQL
Trigger: CAGCTGGGAGGCCTGGTTCCAGGTGACCTTCTCCAC...GAGGTGAAGACCGAGAAGCTGGCCTCTCCGCACCTGTGAAGACCCACTGGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCCTGCGAAGGCGATTCTaGAGCTCTTTCAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTLRRRF*SSFKVR
Trigger: CCTGACCTTGAAAGAGCTTCAGAATCGCCTTCGCAG...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAACAGGCTCCTCATCTTTaGTGTCCTGAGCCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQQAPHL*CPEPPF
Trigger: GAAAGGCGGCTCAGGACATCAAAGATGAGGAGCCTG...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp AGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGGCCACGGCTGTGCATaGACTGCTTGGAGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: SSYRGRCFLLPCTWGEQTGHGCA*TAWSGP
Trigger: AGGACCGCTCCAAGCAGTTCATGCACAGCCGTGGCC...AGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CTGTCCAAGGGCTTCTGGGCTATCTCCGTGAGGACAGGGTCCGCTGAGACAGGGAGCGGCCACGGCTGCTaGAATAGGAGTAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LSKGFWAISVRTGSAETGSGHGC*NRSRER
Trigger: TCTCTCTCTACTCCTATTTCAGCAGCCGTGGCCGCT...CCCTGTCTCAGCGGACCCTGTCCTCACGGAGATAGCCCAGAAGCCCTTGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGGACCAACAAAACTCCTaGTTATTCAAATCAAGGACT +
Preference number: 4 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKDQQNS*LFKSRT
Trigger: AGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTC...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp CTGTCCAAGGGCTTCTGGGCTATCTCCGTGAGGACAGGGTCCGCTGAGACAGGGTGTCGCACTTGCAACTaGCCAGTGGGTCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: LSKGFWAISVRTGSAETGCRTCN*PVGLHR
Trigger: CCTGTGAAGACCCACTGGTCAGTTGCAAGTGCGACA...CCCTGTCTCAGCGGACCCTGTCCTCACGGAGATAGCCCAGAAGCCCTTGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTGCAACTCAGCAGACAAGGTaGGTGACCCCAGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LQRAVFPPALYLGRTDCATQQTR*VTPAQP
Trigger: GGGCTGGGCTGGGGTCACTCACCTTGTCTGCTGAGT...TGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp GTGGGCGAGTGTGACGTTCCCCCAGCTGGTCGCGGAGCTGACAGTGTGGGTGGTGACCATGGAAGTGTGTaGGATTTCACGCACACGCAT +
Preference number: 4 (lower is better)
Translates to: VGECDVPPAGRGADSVGGDHGSV*DFTHTH
Trigger: ATGCGTGTGCGTGAAATCTCACACACTTCCATGGTC...ACCACCCACACTGTCAGCTCCGCGACCAGCTGGGGGAACGTCACACTCGCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTGCAGCACACGCTCACCCCTaGCCACAGCTCTGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: LQRAVFPPALYLGRTDCAAHAHP*PQLCGV
Trigger: GACTCCACAGAGCTGTGGTCAGGGGTGAGCGTGTGC...TGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp GCCTCCCTGGGCCCCGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATGCGTACACACATGAAAACTaGAGAAATGCTTACCTGACA +
Preference number: 4 (lower is better)
Translates to: ASLGPVTAQCGEPGARHAYTHEN*RNAYLT
Trigger: TGTCAGGTAAGCATTTCTTCAGTTTTCATGTGTGTA...CGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAGGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp TCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGAGCCTCCGCGTCCCCTaGGCCCTCTCGCTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: SLTVGPMKQECVAFEVRMSLRVP*ALSLGD
Trigger: ATCGCCAAGCGAGAGGGCGCAGGGGACGCGGAGGCT...CATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACGGTAAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGTCAGTGCGCTTGGGCTaGCTCCCACTGCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GAYEAGVCGLRSSNVFMWSVRLG*LPLRRR
Trigger: CCTGCGGCGCAGTGGGAGGCAGCCCAAGCGCACTGA...CCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAGCTCCACGCGCTCAGTaGGCTTGGGCTGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEAPRAQ*AWAASH
Trigger: GTGGGAGGCAGCCCAAGCGCACTGAGCGCGTGGAGC...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CAAGAAAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCGCTCCACGCGCTCAGTaGGCTTGGGCTGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: QESQSHVEYQVQGTRPAVAPRAQ*AWAASH
Trigger: GTGGGAGGCAGCCCAAGCGCACTGAGCGCGTGGAGC...GACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTTTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTCCAGGGAGACAGGCATaGTCCTCCTGCCGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: DSVLGVNSLTVGPMKQECPGRQA*SSCRGA
Trigger: GGCGCCGCGGCAGGAGGAGCATGCCTGTCTCCCTGG...ACACTCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGTGCTTCCTTCCCGAGTaGTTCACTCCGCGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: CQNNSCADRGGCGVPGSVCFLPE*FTPRRD
Trigger: GTCCCTGCGCGGAGTGAAGCACTCGGGAAGGAAGCA...CACACTGCCCGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GACAGGGGAAACATGCCAGGACCTAGCCTTACACACACACACGCGCGCACATGCCACGAGGTTTCTAGGTaGAGGCTGCTTGCCCACCGC +
Preference number: 4 (lower is better)
Translates to: DRGNMPGPSLTHTHARTCHEVSR*RLLAHR
Trigger: GCGGTGGGCAAGCAGCCTGCACCTAGAAACCTCGTG...GCATGTGCGCGCGTGTGTGTGTGTAAGGCTAGGTCCTGGCATGTTTCCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAGGTGCCGGTCCGGCCTaGCTGGCAGCTGAAGCACCA +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEGAGPA*LAAEAP
Trigger: TGGTGCTTCAGCTGCCAGGCAGGCCGGACCGGCACC...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACAGGCAGCCGTTGCCGCTaGAGGTGCCGGTCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTGSRCR*RCRSGL
Trigger: CAGGCCGGACCGGCACCTGCAGCGGCAACGGCTGCC...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCATTTGGCTGCGATGGTaGAGCACTCATAGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTIWLRW*STHSPK
Trigger: CTTGGGGCTATGAGTGCTGCACCATCGCAGCCAAAT...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGATCGGGGATGGCCTCCTaGCTGGGGGCCGTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRSGMAS*LGAVFL
Trigger: CAAGAAGACGGCCCCCAGGCAGGAGGCCATCCCCGA...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAGCTGCCGTGGAGGCTaGCGCTGCTGTTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRSCRGG*RCCCGC
Trigger: GCAGCCACAACAGCAGCGGCAGCCTCCACGGCAGCT...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGATCGGAAGTCGGCCGATaGCCACTGTCCGTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRSEVGR*PLSVGL
Trigger: GAGGCCGACGGACAGTGGGCATCGGCCGACTTCCGA...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCCGCCTGGACATGGGCTCTaGTTCCCGCTGATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: QRCCQNNSCADRGGCGVPPGHGL*FPLMVQ
Trigger: CTGCACCATCAGCGGGAAGCAGAGCCCATGTCCAGG...CGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GTCACGTGGAGCTGGCCAGAGCTCTTCACAAGCAACACCAAGAACCTCTACCAGGAGGAGGGGTGCAGGTaGAGGTGGGCCTCACCTCCA +
Preference number: 4 (lower is better)
Translates to: VTWSWPELFTSNTKNLYQEEGCR*RWASPP
Trigger: TGGAGGTGAGGCCCACCTGCACCTGCACCCCTCCTC...CTGGTAGAGGTTCTTGGTGTTGCTTGTGAAGAGCTCTGGCCAGCTCCACGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp GACAGGGGAAACATGCCAGGACCTAGCCTTACACACACACACGCGCGCACATGCGTGGGTCTTCACAGGTaGGGAGAGGCCAGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: DRGNMPGPSLTHTHARTCVGLHR*GEASFS
Trigger: CGAGAAGCTGGCCTCTCCGCACCTGTGAAGACCCAC...GCATGTGCGCGCGTGTGTGTGTGTAAGGCTAGGTCCTGGCATGTTTCCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CAAGGACAAATGTCCTCAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCCCCCGGGGCTGCACCTaGACAGCCAGCCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QGQMSSGRSSYCCELHGSPRGCT*TASPCC
Trigger: ACAGCAAGGGCTGGCTGTGCAGGTGCAGCCCCGGGG...GGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTGAGGACATTTGTCCTTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CTGACCAGTGGGTCTTCACAGGTGCGGAGAGGCCAGCTTCTCGGTCTTCACCTCAATGGAGCTGGGTCCTaGAGACCCTCACCCAGCACT +
Preference number: 4 (lower is better)
Translates to: LTSGSSQVRRGQLLGLHLNGAGS*RPSPST
Trigger: AGTGCTGGGTGAGGGTCTGCAGGACCCAGCTCCATT...GAGGTGAAGACCGAGAAGCTGGCCTCTCCGCACCTGTGAAGACCCACTGGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAAGCTACTGCTGTGAACTaGATGGCTCCTGAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQATAVN*MAPEGA
Trigger: AGCACCCTCAGGAGCCATGCAGTTCACAGCAGTAGC...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACAGGGTGGCGGCTCCAGTaGGTCAGCCTCCGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTGWRLQ*VSLRVP
Trigger: GGGGACGCGGAGGCTGACCCACTGGAGCCGCCACCC...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGACGCGCTCAGTGCGCTTaGGCTGCCTCCCACTGCGCC +
Preference number: 4 (lower is better)
Translates to: SGQCSRCELTYRGAYEAGRAQCA*AASHCA
Trigger: GGCGCAGTGGGAGGCAGCCCAAGCGCACTGAGCGCG...TCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp TATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTCGCGCTCAGTGCGCTTaGGCTGCCTCCCACTGCGCC +
Preference number: 4 (lower is better)
Translates to: YTALLSEQLMCRQGWMWRRAQCA*AASHCA
Trigger: GGCGCAGTGGGAGGCAGCCCAAGCGCACTGAGCGCG...ACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGGTGTGTAGCGTGTCGCGCTCAGTGCGCTTaGGCTGCCTCCCACTGCGCC +
Preference number: 4 (lower is better)
Translates to: QECVAFEVRMCSCGCVACRAQCA*AASHCA
Trigger: GGCGCAGTGGGAGGCAGCCCAAGCGCACTGAGCGCG...ACACGCTACACACCCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GCAAGAAAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCGCGGCGCCGCGCAATaGTCAGGAACTGCTCCACGC +
Preference number: 4 (lower is better)
Translates to: ARKPVTCRIPSPRHASCGRGAAQ*SGTAPR
Trigger: GCGTGGAGCAGTTCCTGACCATTGCGCGGCGCCGCG...ACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTTTCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GTGCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTACTGGGGGCCGCTTCTaGTCTCAGAAGCGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: VQTGVDVACRAVWLCNQTTGGRF*SQKRFP
Trigger: TGGAAAGCGCTTCTGAGACCAGAAGCGGCCCCCAGT...AGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GACAGGGGAAACATGCCAGGACCTAGCCTTACACACACACACGCGCGCACATGCGCTGTGGAAGCAGACTaGGGGCCGCTTCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: DRGNMPGPSLTHTHARTCAVEAD*GPLLVS
Trigger: TGAGACCAGAAGCGGCCCCCAGTCTGCTTCCACAGC...GCATGTGCGCGCGTGTGTGTGTGTAAGGCTAGGTCCTGGCATGTTTCCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGTTCCGCAGGCGACTCTaGATCCCTTTCAGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GGCGVPGSVAMQSDWDEEFRRRL*IPFRGL
Trigger: GAGGCCCCTGAAAGGGATCCAGAGTCGCCTGCGGAA...CTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAAGCCCCAAGGCGTCCTaGGGCTGGCGAGGCCATTGG +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGESPKAS*GWRGHW
Trigger: CCAATGGCCTCGCCAGCCCCAGGACGCCTTGGGGCT...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGAGGGGAGGGCTCGGGATaGCCATCTCCTGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGGEGSG*PSPGGP
Trigger: TGGGCCTCCAGGAGATGGCCATCCCGAGCCCTCCCC...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACACGTGCCGAGAGCCTaGAGAGAGGCTCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGHVPRA*REAPPP
Trigger: GGGAGGGGGAGCCTCTCTCCAGGCTCTCGGCACGTG...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACACGCCGCAAGGCGGTGTaGGCAGCAGCACCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTRRKAV*AAAPSG
Trigger: CCCGGAGGGTGCTGCTGCCCACACCGCCTTGCGGCG...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAATGCCCTCGCCGGGTCTaGCCTGTGGCTCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGECPRRV*PVALCP
Trigger: GGGACAGAGAGCCACAGGCCAGACCCGGCGAGGGCA...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGAGCTCCAGCAGGGGCCTaGGGCCCGGCTTCATCACCT +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGAPAGA*GPASSP
Trigger: AGGTGATGAAGCCGGGCCCCAGGCCCCTGCTGGAGC...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGCAGCAGGAGGCATCCTaGACATGGGCTCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: CQNNSCADRGGCGVPGSVQQEAS*TWALLP
Trigger: GGGAAGCAGAGCCCATGTCCAGGATGCCTCCTGCTG...CACACTGCCCGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CTGTCCAAGGGCTTCTGGGCTATCTCCGTGAGGACAGGGTCCGCTGAGACAGGGAGAACACCAATCCTCTaGGGACTGCATGGCCACGGA +
Preference number: 4 (lower is better)
Translates to: LSKGFWAISVRTGSAETGRTPIL*GLHGHG
Trigger: TCCGTGGCCATGCAGTCCCCAGAGGATTGGTGTTCT...CCCTGTCTCAGCGGACCCTGTCCTCACGGAGATAGCCCAGAAGCCCTTGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp AGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTCCCGCCCAAGATGTaGAGTGGCCCCTACAGGACC +
Preference number: 4 (lower is better)
Translates to: SSYRGRCFLLPCTWGEQTVPPKM*SGPYRT
Trigger: GGTCCTGTAGGGGCCACTCCACATCTTGGGCGGGAC...AGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GTCACGTGGAGCTGGCCAGAGCTCTTCACAAGCAACACCAAGAACCTCTACCAGCGGGCAGCTCAAGGCTaGGGCGCCAGGTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VTWSWPELFTSNTKNLYQRAAQG*GARSPS
Trigger: TGAAGGAGACCTGGCGCCCCAGCCTTGAGCTGCCCG...CTGGTAGAGGTTCTTGGTGTTGCTTGTGAAGAGCTCTGGCCAGCTCCACGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CTGACCAGTGGGTCTTCACAGGTGCGGAGAGGCCAGCTTCTCGGTCTTCACCTCCTAGGTCCCCATGTGTaGGAGGCATGGACACCTGCA +
Preference number: 4 (lower is better)
Translates to: LTSGSSQVRRGQLLGLHLLGPHV*EAWTPA
Trigger: TGCAGGTGTCCATGCCTCCCACACATGGGGACCTAG...GAGGTGAAGACCGAGAAGCTGGCCTCTCCGCACCTGTGAAGACCCACTGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CAA 72 bp TCTGCTCTTTATCGTGGATCAAAGTCCCTGGGGCTTTaGTGTGTCCCCGTCAGGCGGCGTCGTGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: SALYRGSKSLGL*CVPVRRRRGLS
Trigger: GCTGAGGCCACGACGCCGCCTGACGGGGACACACAAAAGCCCCAGGGACTTTGATCCACGATAAAGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp GCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGTCATCTTTGATGTCCTaGGCCGCCTTTCCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: ADRGGCGVPGSVAMQSDWSSLMS*AAFPSN
Trigger: GTTGGAGGGAAAGGCGGCTCAGGACATCAAAGATGA...CCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCCTGATCTGCCGTTTCTaGATGAGTCTCATCCTGCAC +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTLICRF*MSLILH
Trigger: GTGCAGGATGAGACTCATTCAGAAACGGCAGATCAG...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GCCAAGTCAAGTAATCAGTACGTGAAGCGGGCCGAGTACCCGATGGCCTGGCCCCTTTCAACATGCTGCTaGAGACGTCGAGAAGCGGCG +
Preference number: 4 (lower is better)
Translates to: AKSSNQYVKRAEYPMAWPLSTCC*RRREAA
Trigger: CGCCGCTTCTCGACGTCTTCAGCAGCATGTTGAAAG...GGGCCAGGCCATCGGGTACTCGGCCCGCTTCACGTACTGATTACTTGACTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp GTGGGCGAGTGTGACGTTCCCCCAGCTGGTCGCGGAGCTGACAGTGTGGGTGGTCAGGCAAATCCTCACTaGGGTAATCAAAACACCCAG +
Preference number: 4 (lower is better)
Translates to: VGECDVPPAGRGADSVGGQANPH*GNQNTQ
Trigger: CTGGGTGTTTTGATTACCTCAGTGAGGATTTGCCTG...ACCACCCACACTGTCAGCTCCGCGACCAGCTGGGGGAACGTCACACTCGCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CTGACCAGTGGGTCTTCACAGGTGCGGAGAGGCCAGCTTCTCGGTCTTCACCTCGCACTGAGTCTTCTCTaGCCTGAGGCCAAGATGAGC +
Preference number: 4 (lower is better)
Translates to: LTSGSSQVRRGQLLGLHLALSLL*PEAKMS
Trigger: GCTCATCTTGGCCTCAGGTCAGAGAAGACTCAGTGC...GAGGTGAAGACCGAGAAGCTGGCCTCTCCGCACCTGTGAAGACCCACTGGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp AAGACCTCAGAGAAAAGAGCCCTTTCCATTCGAGCAGCTACAGAGGGCGGTGTTGAACTGCATGGCTCCTaGGGGTGCTGCGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: KTSEKRALSIRAATEGGVELHGS*GCCGGS
Trigger: GCTGCCCCCGCAGCACCCTCAGGAGCCATGCAGTTC...AACACCGCCCTCTGTAGCTGCTCGAATGGAAAGGGCTCTTTTCTCTGAGGTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp ACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCAGGACAGTGTTCTAAGCCTCCGCGTCCCCTaGGCCCTCTCGCTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: TCRIPSPRHASCGQDSVLSLRVP*ALSLGD
Trigger: ATCGCCAAGCGAGAGGGCGCAGGGGACGCGGAGGCT...TAGAACACTGTCCTGACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGGCATGCTCCTCCTaGCGCGGCGCCGCGCAATGG +
Preference number: 4 (lower is better)
Translates to: HVLAVDNVEKLKRIQRCCQACSS*RGAAQW
Trigger: CCATTGCGCGGCGCCGCGGCAGGAGGAGCATGCCTG...ACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp ATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTTCAGGCATGCTCCTCCTaGCGCGGCGCCGCGCAATGG +
Preference number: 4 (lower is better)
Translates to: MDESVTLFCVNLYPQQDLQACSS*RGAAQW
Trigger: CCATTGCGCGGCGCCGCGGCAGGAGGAGCATGCCTG...AAGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp ATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTTCCAGGGAGACAGGCATaGTCCTCCTGCCGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: MDESVTLFCVNLYPQQDLPGRQA*SSCRGA
Trigger: GGCGCCGCGGCAGGAGGAGCATGCCTGTCTCCCTGG...AAGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp TGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGCGCAGGGACCACCACTaGCTTCTTCACTGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: CQNNSCADRGGCGVPGSVRRDHH*LLHCGL
Trigger: GAGACCACAGTGAAGAAGGCAGTGGTGGTCCCTGCG...CACACTGCCCGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TCCTGGACATGGGCTCTGCTTCCCGCTGATGGTGCAGCCGGTGTCTGTGATCAGGCTGCTCTCACAAGCTaGTTCCTTCCCGAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: SWTWALLPADGAAGVCDQAALTS*FLPECF
Trigger: GAAGCACTCGGGAAGGAAGCAGCTTGTGAGAGCAGC...CTGATCACAGACACCGGCTGCACCATCAGCGGGAAGCAGAGCCCATGTCCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GCCAAGTCAAGTAATCAGTACGTGAAGCGGGCCGAGTACCCGATGGCCTGGCCCGCTGCTCTCACAAGCTaGTTCCTTCCCGAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: AKSSNQYVKRAEYPMAWPAALTS*FLPECF
Trigger: GAAGCACTCGGGAAGGAAGCAGCTTGTGAGAGCAGC...GGGCCAGGCCATCGGGTACTCGGCCCGCTTCACGTACTGATTACTTGACTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCGGCAGCCGTTGCCGCTaGAGGTGCCGGTCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLGSRCR*RCRSGL
Trigger: CAGGCCGGACCGGCACCTGCAGCGGCAACGGCTGCC...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAAGCACGTGCTGACTCTTaGTGTTCCTCTGAATCCGAC +
Preference number: 4 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQARADS*CSSESD
Trigger: GTCGGATTCAGAGGAACAGCAAGAGTCAGCACGTGC...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp AGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTCTTCCACCATGTGGGTaGTGTCTGGGCGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: SSYRGRCFLLPCTWGEQTLPPCG*CLGGML
Trigger: CAGCATCCCGCCCAGACAGCACCCACATGGTGGAAG...AGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCCTGAGAGCTTCTTCTTaGTCCTCCAGCTGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTLRASS*SSSCLF
Trigger: GAAGAGACAGCTGGAGGAGCAAGAAGAAGCTCTCAG...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCCCCCATGGGGATCCTTaGGTTCTTCAAATTGGGATG +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTPHGDP*VLQIGM
Trigger: CATCCCAATTTGAAGAACGCAAGGATCCCCATGGGG...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGGGGGTGGATGTGGCGTaGCGGGCAGTGTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: QDSVLGVNSLTVGPMKQEGVDVA*RAVWLC
Trigger: GCATAGCCACACTGCCCGGCACGCCACATCCACCCC...CTCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGGGGTGGATGTGGCGTaGCGGGCAGTGTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: LTYRGAYEAGVCGLRSSNGVDVA*RAVWLC
Trigger: GCATAGCCACACTGCCCGGCACGCCACATCCACCCC...ATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACGGTAAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGCCAAGGCACGCGTCCTaGGGTCAGGACAGTGTTCTA +
Preference number: 4 (lower is better)
Translates to: CQNNSCADRGGCGVPGSVPRHAS*GQDSVL
Trigger: TAGAACACTGTCCTGACCGCAGGACGCGTGCCTTGG...CACACTGCCCGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTGAGGGTGCTGCGGGGAACACCCTACAACCGTaGTCACCTGACAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: QGDPATAVNCMAPEGAAGNTLQP*SPDSSK
Trigger: CTTGGAGCTGTCAGGTGAGCACGGTTGTAGGGTGTT...CCCCGCAGCACCCTCAGGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTGCATGCACAGCCAGCCCTTaGTGTGGGGAGAATGGAGGC +
Preference number: 4 (lower is better)
Translates to: LQRAVFPPALYLGRTDCACTASP*CGENGG
Trigger: GCCTCCATTCTCCCCACAGCAAGGGCTGGCTGTGCA...TGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CTGTCCAAGGGCTTCTGGGCTATCTCCGTGAGGACAGGGTCCGCTGAGACAGGGGAGACAGGGGAAACATaGCAGGACCTAGCCTTACAC +
Preference number: 4 (lower is better)
Translates to: LSKGFWAISVRTGSAETGETGET*QDLALH
Trigger: GTGTAAGGCTAGGTCCTGGCATGTTTCCCCTGTCTC...CCCTGTCTCAGCGGACCCTGTCCTCACGGAGATAGCCCAGAAGCCCTTGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CTGACCAGTGGGTCTTCACAGGTGCGGAGAGGCCAGCTTCTCGGTCTTCACCTCTCTCCTTCAGGCCTGTaGTGCATGTGCCGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: LTSGSSQVRRGQLLGLHLSPSGL*CMCRRE
Trigger: TTCTCTGCGGCACATGCAGCACAGGCCTGAAGGAGA...GAGGTGAAGACCGAGAAGCTGGCCTCTCCGCACCTGTGAAGACCCACTGGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp AAGGCACGCGTCCTGCGGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTTGGCGGGGCAGGACGTaGGCTCACCAGAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: KARVLRSGQCSRCELTYRWRGRT*AHQNPP
Trigger: TGGAGGATTCTGGTGAGCCCACGTCCTGCCCCGCCA...ACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACCGCAGGACGCGTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GTTTCCCCTGAGGGCACAGCTGGGCACCTTCAGGCCTTCACTTGCTTAAGTGTGGTTCCTTCACAGCTGTaGAAGCAGACTGGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: VSPEGTAGHLQAFTCLSVVPSQL*KQTGGR
Trigger: GCGGCCCCCAGTCTGCTTCCACAGCTGTGAAGGAAC...CACACTTAAGCAAGTGAAGGCCTGAAGGTGCCCAGCTGTGCCCTCAGGGGAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GTGGGCGAGTGTGACGTTCCCCCAGCTGGTCGCGGAGCTGACAGTGTGGGTGGTTGGCTTTTTAATGGCTaGTGTGGCTGCTGCCACATT +
Preference number: 4 (lower is better)
Translates to: VGECDVPPAGRGADSVGGWLFNG*CGCCHI
Trigger: AATGTGGCAGCAGCCACACCAGCCATTAAAAAGCCA...ACCACCCACACTGTCAGCTCCGCGACCAGCTGGGGGAACGTCACACTCGCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp AGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTAAGGCGTCCTGGGGCTaGCGAGGCCATTGGAACAGA +
Preference number: 4 (lower is better)
Translates to: SSYRGRCFLLPCTWGEQTKASWG*RGHWNR
Trigger: TCTGTTCCAATGGCCTCGCCAGCCCCAGGACGCCTT...AGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTAGCCCCAAGGCGTCCTaGGGCTGGCGAGGCCATTGG +
Preference number: 4 (lower is better)
Translates to: HGRVSHSFLRESLPPTGPSPKAS*GWRGHW
Trigger: CCAATGGCCTCGCCAGCCCCAGGACGCCTTGGGGCT...AGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GCCAAGTCAAGTAATCAGTACGTGAAGCGGGCCGAGTACCCGATGGCCTGGCCCGTGCGCGGTGCTGACTaGTGGTGTCTTTCAACATGC +
Preference number: 4 (lower is better)
Translates to: AKSSNQYVKRAEYPMAWPVRGAD*WCLSTC
Trigger: GCATGTTGAAAGACACCACCAGTCAGCACCGCGCAC...GGGCCAGGCCATCGGGTACTCGGCCCGCTTCACGTACTGATTACTTGACTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTGCATCCTCTGTGGCGGGGTaGAAGCGGATCAGACAGAGC +
Preference number: 4 (lower is better)
Translates to: LQRAVFPPALYLGRTDCASSVAG*KRIRQS
Trigger: GCTCTGTCTGATCCGCTTCCACCCCGCCACAGAGGA...TGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACAGGGGGAGACCTGCGGTaGACCCGGGAGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTGGDLR*TREALW
Trigger: CCAGAGAGCCTCCCGGGTCCACCGCAGGTCTCCCCC...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCCCTCCGGGACTGGCATaGGCGCCTGGCCCACGAGGC +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLPPGLA*APGPRG
Trigger: GCCTCGTGGGCCAGGCGCCCATGCCAGTCCCGGAGG...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGATGGAAACGGAGGGGCTaGCCCCCTTGGTCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGWKRRG*PPWSRE
Trigger: TTCCCGGGACCAAGGGGGCCAGCCCCTCCGTTTCCA...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGATCTGTCCCTTCAAACTaGGCGGGGGCGCCCGTCACC +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGSVPSN*AGAPVT
Trigger: GGTGACGGGCGCCCCCGCCCAGTTTGAAGGGACAGA...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGAGCTCTCGGTCGCGGTTaGCGCTCCTCTCCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGALGRG*RSSPGF
Trigger: GAAACCGGGAGAGGAGCGCCAACCGCGACCGAGAGC...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCCGGAGGCATCCTGGACATaGGCTCTGCTTCCCGCTGAT +
Preference number: 4 (lower is better)
Translates to: QRCCQNNSCADRGGCGVPEASWT*ALLPAD
Trigger: ATCAGCGGGAAGCAGAGCCCATGTCCAGGATGCCTC...CGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp ATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGAGACAGGGGTGGATGTaGCGTGCCGGGCAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: IQRCCQNNSCADRGGCGVRQGWM*RAGQCG
Trigger: GCCACACTGCCCGGCACGCCACATCCACCCCTGTCT...CACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CAAGAAAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCAGACAGGGGTGGATGTaGCGTGCCGGGCAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: QESQSHVEYQVQGTRPAVRQGWM*RAGQCG
Trigger: GCCACACTGCCCGGCACGCCACATCCACCCCTGTCT...GACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GACAGGGGAAACATGCCAGGACCTAGCCTTACACACACACACGCGCGCACATGCCCTCTGGGGACTGCATaGCCACGGAGACACTTCAGT +
Preference number: 4 (lower is better)
Translates to: DRGNMPGPSLTHTHARTCPLGTA*PRRHFS
Trigger: ACTGAAGTGTCTCCGTGGCCATGCAGTCCCCAGAGG...GCATGTGCGCGCGTGTGTGTGTGTAAGGCTAGGTCCTGGCATGTTTCCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GTTTCCCCTGAGGGCACAGCTGGGCACCTTCAGGCCTTCACTTGCTTAAGTGTGGCGGAGCTGACAGTGTaGGTGGTTGGTGCCATCGCA +
Preference number: 4 (lower is better)
Translates to: VSPEGTAGHLQAFTCLSVAELTV*VVGAIA
Trigger: TGCGATGGCACCAACCACCCACACTGTCAGCTCCGC...CACACTTAAGCAAGTGAAGGCCTGAAGGTGCCCAGCTGTGCCCTCAGGGGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp ACCCTACAACCGTGCTCACCTGACAGCTCCAAGTTTGGAGATGAGCAGGGAGAGGAGTACCCGATGGCCTaGCCCGGGGTGAAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: TLQPCSPDSSKFGDEQGEEYPMA*PGVKAV
Trigger: AACAGCCTTCACCCCGGGCCAGGCCATCGGGTACTC...CTCTCCCTGCTCATCTCCAAACTTGGAGCTGTCAGGTGAGCACGGTTGTAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTGAGGGTGCTGCGGGGCATGTGTGGGAGGCATaGACACCTGCAATTGTGTGG +
Preference number: 4 (lower is better)
Translates to: QGDPATAVNCMAPEGAAGHVWEA*TPAIVW
Trigger: CCACACAATTGCAGGTGTCCATGCCTCCCACACATG...CCCCGCAGCACCCTCAGGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp TCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGGGACACAACCCCCTaGTCGTTCTCGGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SLTVGPMKQECVAFEVRMWDTTP*SFSGSC
Trigger: GCAGGAGCCCGAGAACGATCAGGGGGTTGTGTCCCA...CATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACGGTAAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATATGGGACACAACCCCCTaGTCGTTCTCGGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: DVACRAVWLCNQTGMKRIWDTTP*SFSGSC
Trigger: GCAGGAGCCCGAGAACGATCAGGGGGTTGTGTCCCA...TATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GTGCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTCCCACACAATCGCCATaGAACCATTCTTCACAGCGG +
Preference number: 4 (lower is better)
Translates to: VQTGVDVACRAVWLCNQTPTQSP*NHSSQR
Trigger: CCGCTGTGAAGAATGGTTTCATGGCGATTGTGTGGG...AGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGGGGGCCAATACATTTTaGGGCACCAGGCGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: GGCGVPGSVAMQSDWDEEGANTF*GTRRLY
Trigger: ATAGAGGCGCCTGGTGCCTCAAAATGTATTGGCCCC...CTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCATCCTCCCACCAATGTaGATTGTGTCAGGCAAATCC +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTILPPM*IVSGKS
Trigger: GGATTTGCCTGACACAATTCACATTGGTGGGAGGAT...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGAACCAAGGTAAGAGGGTaGGGGGCCTCTGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGTKVRG*GASAVP
Trigger: GGGGACAGCAGAGGCCCCTCACCCTCTTACCTTGGT...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGAGCCTGGCCCTGGAAGTaGAATCGCGAAGGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGAWPWK*NREGVC
Trigger: GCAGACCCCTTCGCGATTTCACTTCCAGGGCCAGGC...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GCCAAGTCAAGTAATCAGTACGTGAAGCGGGCCGAGTACCCGATGGCCTGGCCCCAGCACCTGCCTTTATaGCGAAGCACTTCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: AKSSNQYVKRAEYPMAWPQHLPL*RSTSED
Trigger: GTCCTCTGAAGTGCTTCGTCATAAAGGCAGGTGCTG...GGGCCAGGCCATCGGGTACTCGGCCCGCTTCACGTACTGATTACTTGACTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTGCATGTGCCGCAGAGAACTaGGGCTGTGGAATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LQRAVFPPALYLGRTDCACAAEN*GCGMEL
Trigger: CAGCTCCATTCCACAGCCTCAGTTCTCTGCGGCACA...TGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGCCGCAGCAGCCATCTTaGCAGAGGGCCGACGCCTTT +
Preference number: 4 (lower is better)
Translates to: RGAYEAGVCGLRSSNVFMPQQPS*QRADAF
Trigger: AAAGGCGTCGGCCCTCTGGCAAGATGGCTGCTGCGG...CATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370371.8
CDS-3UTR GCA 90 bp TGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCGCTCCACGCGCTCAGTaGGCTTGGGCTGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: CFHVLAVDNVEKLKRIQRAPRAQ*AWAASH
Trigger: GTGGGAGGCAGCCCAAGCGCACTGAGCGCGTGGAGC...GCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATACGAATACTTACCCAGGCATGCTCCTCCTaGCGCGGCGCCGCGCAATGG +
Preference number: 4 (lower is better)
Translates to: RAVWLCNQTGMKRIRILTQACSS*RGAAQW
Trigger: CCATTGCGCGGCGCCGCGGCAGGAGGAGCATGCCTG...GGTAAGTATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTCCAGGGAGACAGGCATaGTCCTCCTGCCGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCPGRQA*SSCRGA
Trigger: GGCGCCGCGGCAGGAGGAGCATGCCTGTCTCCCTGG...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATAAAGCGCTTTCCACGCTaGCCTCGGAGGCTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: DVACRAVWLCNQTGMKRIKRFPR*PRRLSR
Trigger: CCGAGACAGCCTCCGAGGGCAGCGTGGAAAGCGCTT...TATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGAAAGCGCTTTCCACGCTaGCCTCGGAGGCTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGKRFPR*PRRLSR
Trigger: CCGAGACAGCCTCCGAGGGCAGCGTGGAAAGCGCTT...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCGTCCTGCGGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTCCTGTTCCCGCTTCCTaGGAAGGCGATTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: ASCGQDSVLGVNSLTVGPPVPAS*EGDSEA
Trigger: AGCTTCAGAATCGCCTTCGCAGGAAGCGGGAACAGG...AGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACCGCAGGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATTCGTTCTCGGGCTCCTaGTTACTGGGCAGGACGCCC +
Preference number: 4 (lower is better)
Translates to: LTYRGAYEAGVCGLRSSNSFSGS*LLGRTP
Trigger: GGGCGTCCTGCCCAGTAAGCAGGAGCCCGAGAACGA...ATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACGGTAAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGTCTCATCCTGCACTTaGAGAATGGTGCAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: ADRGGCGVPGSVAMQSDWVSSCT*RMVQFG
Trigger: CCCAAACTGCACCATTCTGCAAGTGCAGGATGAGAC...CCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCTACTTGTACAATCGGTaGCATCAGCATCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTYLYNR*HQHLQV
Trigger: GACCTGGAGATGCTGATGGCACCGATTGTACAAGTA...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAAGGATACAGTCATTACTaGAGTACACCGAGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQGYSHY*STPSRA
Trigger: AGCCCGACTCGGTGTACTGCAGTAATGACTGTATCC...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp AAGGCACGCGTCCTGCGGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTTCGCCCACGACGGCGTaGTGCTCTCACAAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: KARVLRSGQCSRCELTYRSPTTA*CSHKLL
Trigger: AAGCAGCTTGTGAGAGCAGCACGCCGTCGTGGGCGA...ACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACCGCAGGACGCGTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGACACGAGGTTTCTAGGTaGAGGCTGCTTGCCCACCGC +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRHEVSR*RLLAHR
Trigger: GCGGTGGGCAAGCAGCCTGCACCTAGAAACCTCGTG...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGACGAGAAGCGGCGCTGTaGTCTTCTCAGGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRREAAL*SSQGQH
Trigger: GTGCTGTCCCTGAGAAGAGCACAGCGCCGCTTCTCG...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACGGAGGCCACGGCTGTaGATGAACTGCTTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGRRPRL*MNCLER
Trigger: CCGCTCCAAGCAGTTCATGCACAGCCGTGGCCTCCG...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAACCGCTCGGCTGCAGCTaGTTCAGGAGCCCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEPLGCS*FRSPFH
Trigger: GTGGAAAGGGCTCCTGAAGCAGCTGCAGCCGAGCGG...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAACCGACGGCGGCCCTCTaGTGCCTGAGAGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEPTAAL*CLRASS
Trigger: AGAAGAAGCTCTCAGGCAGCAGAGGGCCGCCGTCGG...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAGGGTGAGGGGCCTCTaGTGTCCCCATAAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRRVRGL*CPHKEV
Trigger: CACCTCCTTATGGGGACAGCAGAGGCCCCTCACCCT...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACACCCGGCTTCATCACCTaGGGGGCCTGGCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTPGFIT*GAWPWK
Trigger: CTTCCAGGGCCAGGCCCCGCAGGTGATGAAGCCGGG...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCCAAGTCAAGTAATCAGTACGTGAAGCGGGCCGAGTACCCGATGGCCTGGCCCAGTGTCTGCACTGAGTaGACACACTGTCGCACTTGC +
Preference number: 4 (lower is better)
Translates to: AKSSNQYVKRAEYPMAWPSVCTE*THCRTC
Trigger: GCAAGTGCGACAGTGTGTGCACTCAGTGCAGACACT...GGGCCAGGCCATCGGGTACTCGGCCCGCTTCACGTACTGATTACTTGACTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp TCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGACCAACCCGTAGTGCGTaGTCGCCGCGAGGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: SGQCSRCELTYRGAYEAGPTRSA*SPRGEF
Trigger: GAACTCCCCTCGCGGCGACCACGCACTACGGGTTGG...TCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370371.8
CDS-3UTR CCA 90 bp GGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATACGAATACTTACCAGGGGTGGCGGCTCCAGTaGGTCAGCCTCCGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: GSVAMQSDWDEENTNTYQGWRLQ*VSLRVP
Trigger: GGGGACGCGGAGGCTGACCCACTGGAGCCGCCACCC...CTGGTAAGTATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp TGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCCGCGGCGCCGCGCAATaGTCAGGAACTGCTCCACGC +
Preference number: 4 (lower is better)
Translates to: CFHVLAVDNVEKLKRIQRRGAAQ*SGTAPR
Trigger: GCGTGGAGCAGTTCCTGACCATTGCGCGGCGCCGCG...GCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp TACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCGTTCCTTCACAGCTGTaGAAGCAGACTGGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: YSAVVRTTHVQTGVDVACVPSQL*KQTGGR
Trigger: GCGGCCCCCAGTCTGCTTCCACAGCTGTGAAGGAAC...GCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CAAGAAAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCTCAGGGGCCTCTCAGTaGGCTCCTGTTCCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: QESQSHVEYQVQGTRPAVSGASQ*APVPAS
Trigger: GGAAGCGGGAACAGGAGCCCACTGAGAGGCCCCTGA...GACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp TCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTCAGGGGCCTCTCAGTaGGCTCCTGTTCCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: SLTVGPMKQECVAFEVRMSGASQ*APVPAS
Trigger: GGAAGCGGGAACAGGAGCCCACTGAGAGGCCCCTGA...CATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACGGTAAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGATTCCGCAGGCGACTCTaGATCCCTTTCAGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRFRRRL*IPFRGL
Trigger: GAGGCCCCTGAAAGGGATCCAGAGTCGCCTGCGGAA...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCCAGAATGGTGCAGTTTaGGCAGATATAGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTQNGAV*ADIVFP
Trigger: GGGGAAGACTATATCTGCCCAAACTGCACCATTCTG...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp AGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGGGATGGCCATCTCCTaGAGGCCCAGGGAAATACGT +
Preference number: 4 (lower is better)
Translates to: SSYRGRCFLLPCTWGEQTGMAIS*RPREIR
Trigger: ACGTATTTCCCTGGGCCTCCAGGAGATGGCCATCCC...AGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp ATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTTGGGGAGGGCTCGGGATaGCCATCTCCTGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: MDESVTLFCVNLYPQQDLGEGSG*PSPGGP
Trigger: TGGGCCTCCAGGAGATGGCCATCCCGAGCCCTCCCC...AAGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGATGGAGGAAGCTGCCGTaGAGGCTGCCGCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGWRKLP*RLPLLL
Trigger: CAACAGCAGCGGCAGCCTCCACGGCAGCTTCCTCCA...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCGGGGGAGACCTGCGGTaGACCCGGGAGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLGGDLR*TREALW
Trigger: CCAGAGAGCCTCCCGGGTCCACCGCAGGTCTCCCCC...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGAGTGGTTTTGGGCTCCTaGGGGAGACCTGCGGTGGAC +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGVVLGS*GRPAVD
Trigger: GTCCACCGCAGGTCTCCCCCAGGAGCCCAAAACCAC...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTCCGAGAAGTGGGCCATaGAGACCCCGACGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCPRSGP*RPRRRP
Trigger: GGGCCGCCGTCGGGGTCTCCATGGCCCACTTCTCGG...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGATCCGACACCGAGAAGTaGGCCATGGAGACCCCGACG +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGSDTEK*AMETPT
Trigger: CGTCGGGGTCTCCATGGCCCACTTCTCGGTGTCGGA...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTCCTCACCGGTCTCAGTaGCCAGGCGCCTCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCPHRSQ*PGASPA
Trigger: GGCAGGCGAGGCGCCTGGCCACTGAGACCGGTGAGG...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAACCACGAGGCCACCCCTaGAAGCATCTCTCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEPRGHP*KHLSRA
Trigger: TGCCCGAGAGAGATGCTTCCAGGGGTGGCCTCGTGG...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAACCTCCGGGACTGGCATaGGCGCCTGGCCCACGAGGC +
Preference number: 4 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKPPGLA*APGPRG
Trigger: GCCTCGTGGGCCAGGCGCCCATGCCAGTCCCGGAGG...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCGGCTCCGAATCTGGCTaGCGGAGGCCCTCGTGGCCC +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLGSESG*RRPSWP
Trigger: GGGCCACGAGGGCCTCCGCCAGCCAGATTCGGAGCC...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAACCTGTCCGGGCGCACTaGAGGAGAGCGCGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKPVRAH*RRARRA
Trigger: CGCCCTCCGCGCTCTCCTCCAGTGCGCCCGGACAGG...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCGCGTGCCGGGCAGTGTaGCTATGCAATCAGACTGGG +
Preference number: 4 (lower is better)
Translates to: YSAVVRTTHVQTGVDVACACRAV*LCNQTG
Trigger: CCCAGTCTGATTGCATAGCCACACTGCCCGGCACGC...GCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp TATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTAGACAGGGGTGGATGTaGCGTGCCGGGCAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: YTALLSEQLMCRQGWMWRRQGWM*RAGQCG
Trigger: GCCACACTGCCCGGCACGCCACATCCACCCCTGTCT...ACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGATGTGCAGACAGGGGTaGATGTGGCGTGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: GAYEAGVCGLRSSNVFMWMCRQG*MWRAGQ
Trigger: CTGCCCGGCACGCCACATCCACCCCTGTCTGCACAT...CCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CAAGGACAAATGTCCTCAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCCACCCTGCACAGCTATaGCAGGAACACCCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: QGQMSSGRSSYCCELHGSHPAQL*QEHPPR
Trigger: CCTCGGCGGGTGTTCCTGCCATAGCTGTGCAGGGTG...GGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTGAGGACATTTGTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CTGACCAGTGGGTCTTCACAGGTGCGGAGAGGCCAGCTTCTCGGTCTTCACCTCTCCAGCTGTGAAGAATaGGCTCCAGTAGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: LTSGSSQVRRGQLLGLHLSSCEE*APVGTW
Trigger: CCACGTTCCTACTGGAGCCCATTCTTCACAGCTGGA...GAGGTGAAGACCGAGAAGCTGGCCTCTCCGCACCTGTGAAGACCCACTGGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp AGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTACTGAGGCTGTGGAATaGAGCTGGGTCCTGCAGACC +
Preference number: 4 (lower is better)
Translates to: SSYRGRCFLLPCTWGEQTTEAVE*SWVLQT
Trigger: GGTCTGCAGGACCCAGCTCCATTCCACAGCCTCAGT...AGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTGCAGACGGGGGCTGGGCATaGTTAACAGGCAGGCATCTT +
Preference number: 4 (lower is better)
Translates to: LQRAVFPPALYLGRTDCADGGWA*LTGRHL
Trigger: AAGATGCCTGCCTGTTAACCATGCCCAGCCCCCGTC...TGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp GACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTTGGGACACAACCCCCTaGTCGTTCTCGGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: DSVLGVNSLTVGPMKQECWDTTP*SFSGSC
Trigger: GCAGGAGCCCGAGAACGATCAGGGGGTTGTGTCCCA...ACACTCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAAATAAACCTGTTGTTGTaGGGCTGGCGGCAAATGCAA +
Preference number: 4 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQINLLL*GWRQMQ
Trigger: TTGCATTTGCCGCCAGCCTCACAACAACAGGTTTAT...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp GTGCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTCTGATCTGCCGTTTCTaGATGAGTCTCATCCTGCAC +
Preference number: 4 (lower is better)
Translates to: VQTGVDVACRAVWLCNQTLICRF*MSLILH
Trigger: GTGCAGGATGAGACTCATTCAGAAACGGCAGATCAG...AGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp CTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTGCAGGGGCCAATACATTTTaGGGCACCAGGCGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: LQRAVFPPALYLGRTDCAGANTF*GTRRLY
Trigger: ATAGAGGCGCCTGGTGCCTCAAAATGTATTGGCCCC...TGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGATCCGCTTCTTCCGGTTaGAGTCGGGTCCGCTTTTCG +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRSASSG*SRVRFS
Trigger: CGAAAAGCGGACCCGACTTCAACCGGAAGAAGCGGA...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp CAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCCGGCATTTATACAACAGTaGCGGCGAGGGAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: QRCCQNNSCADRGGCGVPAFIQQ*RRGSSS
Trigger: ACTGCTGCTCCCTCGCCGTCACTGTTGTATAAATGC...CGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370366.1
CDS-3UTR TCA 90 bp CAAGGACAAATGTCCTCAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTCTGGGCTATCTCCGTaGGGACAGGGTCCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: QGQMSSGRSSYCCELHGSSGLSP*GQGPLR
Trigger: TCTCAGCGGACCCTGTCCTCACGGAGATAGCCCAGA...GGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTGAGGACATTTGTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CCAGACAGCACCTGCCTTTATGACGAAGCACTTCAGAGGACACTGTGTGATCCAGGCTTCACGCGGAAATaGCGGGGGCTGGGCATGGTT +
Preference number: 4 (lower is better)
Translates to: PDSTCLYDEALQRTLCDPGFTRK*RGLGMV
Trigger: AACCATGCCCAGCCCCCGTCATTTCCGCGTGAAGCC...TGGATCACACAGTGTCCTCTGAAGTGCTTCGTCATAAAGGCAGGTGCTGTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTAGCCTCCGCGTCCCCTaGGCCCTCTCGCTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCSLRVP*ALSLGD
Trigger: ATCGCCAAGCGAGAGGGCGCAGGGGACGCGGAGGCT...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCAGCCTCCGCGTCCCCTaGGCCCTCTCGCTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLSLRVP*ALSLGD
Trigger: ATCGCCAAGCGAGAGGGCGCAGGGGACGCGGAGGCT...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGCAATGGTCAGGAACTaGTCCACGCGCTCAGTGCGC +
Preference number: 4 (lower is better)
Translates to: LTYRGAYEAGVCGLRSSNAMVRN*STRSVR
Trigger: GCGCACTGAGCGCGTGGAGCAGTTCCTGACCATTGC...ATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACGGTAAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGGCAATGGTCAGGAACTaGTCCACGCGCTCAGTGCGC +
Preference number: 4 (lower is better)
Translates to: GAYEAGVCGLRSSNVFMWAMVRN*STRSVR
Trigger: GCGCACTGAGCGCGTGGAGCAGTTCCTGACCATTGC...CCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GTGATGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACACCAGGGAGACAGGCATaGTCCTCCTGCCGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: VMLSCAGRGQCGKTEAYTPGRQA*SSCRGA
Trigger: GGCGCCGCGGCAGGAGGAGCATGCCTGTCTCCCTGG...TGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGAAGCGCTTTCCACGCTaGCCTCGGAGGCTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: EAYTALLSEQLMCRQGWMKRFPR*PRRLSR
Trigger: CCGAGACAGCCTCCGAGGGCAGCGTGGAAAGCGCTT...CATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTGCACCTGTTCCCGCTTCCTaGGAAGGCGATTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LQRAVFPPALYLGRTDCAPVPAS*EGDSEA
Trigger: AGCTTCAGAATCGCCTTCGCAGGAAGCGGGAACAGG...TGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTTCGTTCTCGGGCTCCTaGTTACTGGGCAGGACGCCC +
Preference number: 4 (lower is better)
Translates to: HGRVSHSFLRESLPPTGPSFSGS*LLGRTP
Trigger: GGGCGTCCTGCCCAGTAAGCAGGAGCCCGAGAACGA...AGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp TACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCGAGGCTGGCGGCAAATaGAATACAGGGCGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: YSAVVRTTHVQTGVDVACEAGGK*NTGRWG
Trigger: ACCCCAACGCCCTGTATTGCATTTGCCGCCAGCCTC...GCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TCCTGGACATGGGCTCTGCTTCCCGCTGATGGTGCAGCCGGTGTCTGTGATCAGCTCGAGCCTCAGAAATaGCCACACAATCGCCATGAA +
Preference number: 4 (lower is better)
Translates to: SWTWALLPADGAAGVCDQLEPQK*PHNRHE
Trigger: TTCATGGCGATTGTGTGGGCATTTCTGAGGCTCGAG...CTGATCACAGACACCGGCTGCACCATCAGCGGGAAGCAGAGCCCATGTCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GCCAAGTCAAGTAATCAGTACGTGAAGCGGGCCGAGTACCCGATGGCCTGGCCCCTCGAGCCTCAGAAATaGCCACACAATCGCCATGAA +
Preference number: 4 (lower is better)
Translates to: AKSSNQYVKRAEYPMAWPLEPQK*PHNRHE
Trigger: TTCATGGCGATTGTGTGGGCATTTCTGAGGCTCGAG...GGGCCAGGCCATCGGGTACTCGGCCCGCTTCACGTACTGATTACTTGACTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp GCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGTACTTGTACAATCGGTaGCATCAGCATCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: ADRGGCGVPGSVAMQSDWYLYNR*HQHLQV
Trigger: GACCTGGAGATGCTGATGGCACCGATTGTACAAGTA...CCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CAAGAAAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCTGCTTCCTTCCCGAGTaGTTCACTCCGCGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QESQSHVEYQVQGTRPAVCFLPE*FTPRRD
Trigger: GTCCCTGCGCGGAGTGAAGCACTCGGGAAGGAAGCA...GACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTTTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CAAGAAAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCCCCACGACGGCGTGCTaGTCTCACAAGCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: QESQSHVEYQVQGTRPAVPTTAC*SHKLLP
Trigger: AGGAAGCAGCTTGTGAGAGCAGCACGCCGTCGTGGG...GACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATCCCACGACGGCGTGCTaGTCTCACAAGCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LTYRGAYEAGVCGLRSSNPTTAC*SHKLLP
Trigger: AGGAAGCAGCTTGTGAGAGCAGCACGCCGTCGTGGG...ATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACGGTAAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CAAGGACAAATGTCCTCAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTCGCCCACGACGGCGTaGTGCTCTCACAAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: QGQMSSGRSSYCCELHGSSPTTA*CSHKLL
Trigger: AAGCAGCTTGTGAGAGCAGCACGCCGTCGTGGGCGA...GGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTGAGGACATTTGTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCGCTGTCTGGGCGGGATaGTGCGGAGGCCACGGCTGT +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLAVWAG*CGGHGC
Trigger: ACAGCCGTGGCCTCCGCAGCATCCCGCCCAGACAGC...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTGCTGTCTGGGCGGGATaGTGCGGAGGCCACGGCTGT +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCAVWAG*CGGHGC
Trigger: ACAGCCGTGGCCTCCGCAGCATCCCGCCCAGACAGC...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAACTTCCACCATGTGGGTaGTGTCTGGGCGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGELPPCG*CLGGML
Trigger: CAGCATCCCGCCCAGACAGCACCCACATGGTGGAAG...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAACGTAGTCCACCAAACTaGAGGGGTGCAGGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGERSPPN*RGAGAL
Trigger: AAGGGCGCCTGCACCCCTGCAGTTTGGTGGACTACG...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACGCTCTCTTTGCTCTTaGTCCGGTCCTTGCGGTCGC +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGRSLCS*SGPCGR
Trigger: GCGACCGCAAGGACCGGAGCAAGAGCAAAGAGAGCG...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGCCTGGACATGGGCTCTaGTTCCCGCTGATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GQDSVLGVNSLTVGPMKQPGHGL*FPLMVQ
Trigger: CTGCACCATCAGCGGGAAGCAGAGCCCATGTCCAGG...CTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAAGGGGTGGATGTGGCGTaGCGGGCAGTGTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: AGRGQCGKTEAYTALLSEGVDVA*RAVWLC
Trigger: GCATAGCCACACTGCCCGGCACGCCACATCCACCCC...TTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GTCACGTGGAGCTGGCCAGAGCTCTTCACAAGCAACACCAAGAACCTCTACCAGGAGGTGCTGAGGTGCTaGAGTGTCTGCACTGAGTGC +
Preference number: 4 (lower is better)
Translates to: VTWSWPELFTSNTKNLYQEVLRC*SVCTEC
Trigger: GCACTCAGTGCAGACACTGCAGCACCTCAGCACCTC...CTGGTAGAGGTTCTTGGTGTTGCTTGTGAAGAGCTCTGGCCAGCTCCACGTGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp ACCCAGACGCCTCTGCTCTTTATCGTGGATCAAAGTCCCTGGGGCTTTTGTGTGGTGCCATCCGGGAGGTaGTGGGAGACCTGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: TQTPLLFIVDQSPWGFCVVPSGR*WETCPF
Trigger: GAAAGGACAGGTCTCCCAGCACCTCCCGGATGGCAC...CACACAAAAGCCCCAGGGACTTTGATCCACGATAAAGAGCAGAGGCGTCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp AGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTAGTGTGGGTGGTTGGTaGCATCGCACTCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: SSYRGRCFLLPCTWGEQTSVGGW*HRTQQT
Trigger: TGTCTGCTGAGTGCGATGGCACCAACCACCCACACT...AGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCAGGGTGGCGGCTCCAGTaGGTCAGCCTCCGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: VDNVEKLKRIQRCCQNNSGWRLQ*VSLRVP
Trigger: GGGGACGCGGAGGCTGACCCACTGGAGCCGCCACCC...TGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGAGTTCCTTCACAGCTGTaGAAGCAGACTGGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGVPSQL*KQTGGR
Trigger: GCGGCCCCCAGTCTGCTTCCACAGCTGTGAAGGAAC...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGGTTCCTTCACAGCTGTaGAAGCAGACTGGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: QDSVLGVNSLTVGPMKQEVPSQL*KQTGGR
Trigger: GCGGCCCCCAGTCTGCTTCCACAGCTGTGAAGGAAC...CTCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGTTCCTTCACAGCTGTaGAAGCAGACTGGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: GQDSVLGVNSLTVGPMKQVPSQL*KQTGGR
Trigger: GCGGCCCCCAGTCTGCTTCCACAGCTGTGAAGGAAC...CTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CCAGACAGCACCTGCCTTTATGACGAAGCACTTCAGAGGACACTGTGTGATCCATCAGGGGCCTCTCAGTaGGCTCCTGTTCCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: PDSTCLYDEALQRTLCDPSGASQ*APVPAS
Trigger: GGAAGCGGGAACAGGAGCCCACTGAGAGGCCCCTGA...TGGATCACACAGTGTCCTCTGAAGTGCTTCGTCATAAAGGCAGGTGCTGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGTTCCGCAGGCGACTCTaGATCCCTTTCAGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GQDSVLGVNSLTVGPMKQFRRRL*IPFRGL
Trigger: GAGGCCCCTGAAAGGGATCCAGAGTCGCCTGCGGAA...CTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CAAGAAAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCTTCCGCAGGCGACTCTaGATCCCTTTCAGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: QESQSHVEYQVQGTRPAVFRRRL*IPFRGL
Trigger: GAGGCCCCTGAAAGGGATCCAGAGTCGCCTGCGGAA...GACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GTGGGCGAGTGTGACGTTCCCCCAGCTGGTCGCGGAGCTGACAGTGTGGGTGGTTCCTGTCTTCCTTCGTaGATTTATACAACAGTGACG +
Preference number: 4 (lower is better)
Translates to: VGECDVPPAGRGADSVGGSCLPS*IYTTVT
Trigger: CGTCACTGTTGTATAAATCCACGAAGGAAGACAGGA...ACCACCCACACTGTCAGCTCCGCGACCAGCTGGGGGAACGTCACACTCGCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGATCTTTGAGGCTGCCATaGCTGCCGCTTTCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRSLRLP*LPLSPR
Trigger: CCGAGGAGAAAGCGGCAGCCATGGCAGCCTCAAAGA...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTCCGGTCCGGCCTGCCTaGCAGCTGAAGCACCACTCG +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCPVRPA*QLKHHS
Trigger: CGAGTGGTGCTTCAGCTGCCAGGCAGGCCGGACCGG...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GACAGGGGAAACATGCCAGGACCTAGCCTTACACACACACACGCGCGCACATGCAACAGAAGGTACCACTaGCTTCCTTACGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: DRGNMPGPSLTHTHARTCNRRYH*LPYGSH
Trigger: GTGGGAGCCGTAAGGAAGCCAGTGGTACCTTCTGTT...GCATGTGCGCGCGTGTGTGTGTGTAAGGCTAGGTCCTGGCATGTTTCCCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGATCGGCACATCCTGTCTaGCTTCCACCATGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRSAHPV*LPPCGC
Trigger: GCACCCACATGGTGGAAGCCAGACAGGATGTGCCGA...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAGGGCAAGAGTTTGGATaGAACAGGGTCCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRGQEFG*NRVLGA
Trigger: AGCGCCCAGGACCCTGTTCCATCCAAACTCTTGCCC...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GTCACGTGGAGCTGGCCAGAGCTCTTCACAAGCAACACCAAGAACCTCTACCAGGGGCAAGAGTTTGGATaGAACAGGGTCCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: VTWSWPELFTSNTKNLYQGQEFG*NRVLGA
Trigger: AGCGCCCAGGACCCTGTTCCATCCAAACTCTTGCCC...CTGGTAGAGGTTCTTGGTGTTGCTTGTGAAGAGCTCTGGCCAGCTCCACGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTGCCCTTTCCACCTCGTaGCGCCGCCCTCGCTCCACA +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCALSTS*RRPRST
Trigger: TGTGGAGCGAGGGCGGCGCCACGAGGTGGAAAGGGC...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAAGCTGTCTCCAACCGTaGCGGGGCGGGTGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKSCLQP*RGGCPP
Trigger: GGGAGGGCACCCGCCCCGCCACGGTTGGAGACAGCT...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGATGGCGGAGGCCCTCGTaGCCCATCGTTAGAAGCGAT +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGWRRPS*PIVRSD
Trigger: ATCGCTTCTAACGATGGGCCACGAGGGCCTCCGCCA...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGAAGGATGGGGCCCTCTTaGGCCCACGAAATGACCAGG +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGRMGPS*AHEMTR
Trigger: CCTGGTCATTTCGTGGGCCCAAGAGGGCCCCATCCT...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAGCGGCTTCTCTTTaGGCCCCACGTCAAACCGCT +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGPAASL*APRQTA
Trigger: AGCGGTTTGACGTGGGGCCCAAAGAGAAGCCGCTGG...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCCTCAGAAGGCGAAACTaGACCAACAAAACTCCTGAT +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTLRRRN*TNKTPD
Trigger: ATCAGGAGTTTTGTTGGTCCAGTTTCGCCTTCTGAG...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCGACAGGCCCAGGGGATaGCTATCCAGAAAGAACGGG +
Preference number: 4 (lower is better)
Translates to: YSAVVRTTHVQTGVDVACDRPRG*LSRKNG
Trigger: CCCGTTCTTTCTGGATAGCCATCCCCTGGGCCTGTC...GCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTATGTGCAGACAGGGGTaGATGTGGCGTGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: DSVLGVNSLTVGPMKQECMCRQG*MWRAGQ
Trigger: CTGCCCGGCACGCCACATCCACCCCTGTCTGCACAT...ACACTCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GCCAAGTCAAGTAATCAGTACGTGAAGCGGGCCGAGTACCCGATGGCCTGGCCCCGGAGACACTTCAGTTaGGCATCAGATACTAACCCC +
Preference number: 4 (lower is better)
Translates to: AKSSNQYVKRAEYPMAWPRRHFS*ASDTNP
Trigger: GGGGTTAGTATCTGATGCCCAACTGAAGTGTCTCCG...GGGCCAGGCCATCGGGTACTCGGCCCGCTTCACGTACTGATTACTTGACTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp ACCCTACAACCGTGCTCACCTGACAGCTCCAAGTTTGGAGATGAGCAGGGAGAGCATGAGGGGTGTGGGTaGGAACACCCTGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: TLQPCSPDSSKFGDEQGEHEGCG*EHPAQL
Trigger: TAGCTGTGCAGGGTGTTCCCACCCACACCCCTCATG...CTCTCCCTGCTCATCTCCAAACTTGGAGCTGTCAGGTGAGCACGGTTGTAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CCAGACAGCACCTGCCTTTATGACGAAGCACTTCAGAGGACACTGTGTGATCCAGCCCAAGATGTGGAGTaGCCCCTACAGGACCCCAGC +
Preference number: 4 (lower is better)
Translates to: PDSTCLYDEALQRTLCDPAQDVE*PLQDPS
Trigger: GCTGGGGTCCTGTAGGGGCCACTCCACATCTTGGGC...TGGATCACACAGTGTCCTCTGAAGTGCTTCGTCATAAAGGCAGGTGCTGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp ATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTTAACGTGGGCTGTGCCTaGGGCGACAGAAGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: MDESVTLFCVNLYPQQDLNVGCA*GDRSPA
Trigger: GGCGGGACTTCTGTCGCCCCAGGCACAGCCCACGTT...AAGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp ACCCAGACGCCTCTGCTCTTTATCGTGGATCAAAGTCCCTGGGGCTTTTGTGTGGGCTTTTCCTCTCCCTaGTCACGTGGAGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: TQTPLLFIVDQSPWGFCVGFSSP*SRGAGQ
Trigger: CTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCC...CACACAAAAGCCCCAGGGACTTTGATCCACGATAAAGAGCAGAGGCGTCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp ACCCAGACGCCTCTGCTCTTTATCGTGGATCAAAGTCCCTGGGGCTTTTGTGTGTTGCTGTGGGGAGAATaGAGGCGCCGCTCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: TQTPLLFIVDQSPWGFCVLLWGE*RRRSSG
Trigger: ACCAGAGGAGCGGCGCCTCCATTCTCCCCACAGCAA...CACACAAAAGCCCCAGGGACTTTGATCCACGATAAAGAGCAGAGGCGTCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp ACCCTACAACCGTGCTCACCTGACAGCTCCAAGTTTGGAGATGAGCAGGGAGAGCCTCAGCAAGTGCCTTaGTGGGCGAGTGTGACGTTC +
Preference number: 4 (lower is better)
Translates to: TLQPCSPDSSKFGDEQGEPQQVP*WASVTF
Trigger: GAACGTCACACTCGCCCACCAAGGCACTTGCTGAGG...CTCTCCCTGCTCATCTCCAAACTTGGAGCTGTCAGGTGAGCACGGTTGTAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp AGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTAACAGGCAGGCATCTTaGCTGCGGTCCAGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: SSYRGRCFLLPCTWGEQTNRQAS*LRSSPV
Trigger: TACAGGACTGGACCGCAGCCAAGATGCCTGCCTGTT...AGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GTTTCCCCTGAGGGCACAGCTGGGCACCTTCAGGCCTTCACTTGCTTAAGTGTGCTCCTGCCCTGTACTTaGGGAGAACAGACTGTGCAC +
Preference number: 4 (lower is better)
Translates to: VSPEGTAGHLQAFTCLSVLLPCT*GEQTVH
Trigger: GTGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAG...CACACTTAAGCAAGTGAAGGCCTGAAGGTGCCCAGCTGTGCCCTCAGGGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTTGGGACACAACCCCCTaGTCGTTCTCGGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HVLAVDNVEKLKRIQRCCWDTTP*SFSGSC
Trigger: GCAGGAGCCCGAGAACGATCAGGGGGTTGTGTCCCA...ACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp TACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCCAGGCTCCTCATCTTTaGTGTCCTGAGCCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: YSAVVRTTHVQTGVDVACQAPHL*CPEPPF
Trigger: GAAAGGCGGCTCAGGACATCAAAGATGAGGAGCCTG...GCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GTGCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTATAAACCTGTTGTTGTaGGGCTGGCGGCAAATGCAA +
Preference number: 4 (lower is better)
Translates to: VQTGVDVACRAVWLCNQTINLLL*GWRQMQ
Trigger: TTGCATTTGCCGCCAGCCTCACAACAACAGGTTTAT...AGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GTTTCCCCTGAGGGCACAGCTGGGCACCTTCAGGCCTTCACTTGCTTAAGTGTGCCCACACAATCGCCATaGAACCATTCTTCACAGCGG +
Preference number: 4 (lower is better)
Translates to: VSPEGTAGHLQAFTCLSVPTQSP*NHSSQR
Trigger: CCGCTGTGAAGAATGGTTTCATGGCGATTGTGTGGG...CACACTTAAGCAAGTGAAGGCCTGAAGGTGCCCAGCTGTGCCCTCAGGGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGATGGGGATGGTGCCCTTaGAACCTGAGGGTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRWGWCP*NLRVAF
Trigger: AAAAGCCACCCTCAGGTTTCAAGGGCACCATCCCCA...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGAAGGTGTGCGCGGTGCTaGCTGGTGGTGTCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGRCARC*LVVSFN
Trigger: GTTGAAAGACACCACCAGTCAGCACCGCGCACACCT...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp CATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTACCTCCCTTTCTGGCTaGGCCTTGGGCTTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HGRVSHSFLRESLPPTGPTSLSG*ALGFWA
Trigger: TGCCCAGAAGCCCAAGGCTCAGCCAGAAAGGGAGGT...AGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp GCCAAGTCAAGTAATCAGTACGTGAAGCGGGCCGAGTACCCGATGGCCTGGCCCATCCCAAGTAGGATTTaGGGGGACACACTAAAGCAC +
Preference number: 4 (lower is better)
Translates to: AKSSNQYVKRAEYPMAWPIPSRI*GDTLKH
Trigger: GTGCTTTAGTGTGTCCCCTCAAATCCTACTTGGGAT...GGGCCAGGCCATCGGGTACTCGGCCCGCTTCACGTACTGATTACTTGACTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp AAGACCTCAGAGAAAAGAGCCCTTTCCATTCGAGCAGCTACAGAGGGCGGTGTTCCCACATCAGTGCCCTaGTGCAGACGGGCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: KTSEKRALSIRAATEGGVPTSVP*CRRAAQ
Trigger: TTGAGCTGCCCGTCTGCATCAGGGCACTGATGTGGG...AACACCGCCCTCTGTAGCTGCTCGAATGGAAAGGGCTCTTTTCTCTGAGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CTGACCAGTGGGTCTTCACAGGTGCGGAGAGGCCAGCTTCTCGGTCTTCACCTCTTGTGTGGTATAAACTaGGGCACATGGACGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LTSGSSQVRRGQLLGLHLLCGIN*GTWTSQ
Trigger: CTGACTCGTCCATGTGCCTCAGTTTATACCACACAA...GAGGTGAAGACCGAGAAGCTGGCCTCTCCGCACCTGTGAAGACCCACTGGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp ACCATGGAAGTGTGTGAGATTTCACGCACACGCATTCATGTCAACAAGGACATCAGCCTCCGCGTCCCCTaGGCCCTCTCGCTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: TMEVCEISRTRIHVNKDISLRVP*ALSLGD
Trigger: ATCGCCAAGCGAGAGGGCGCAGGGGACGCGGAGGCT...GATGTCCTTGTTGACATGAATGCGTGTGCGTGAAATCTCACACACTTCCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp GGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATACGAATACTTACCAGTCAGTGCGCTTGGGCTaGCTCCCACTGCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GSVAMQSDWDEENTNTYQSVRLG*LPLRRR
Trigger: CCTGCGGCGCAGTGGGAGGCAGCCCAAGCGCACTGA...CTGGTAAGTATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GTGATGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCTCCACGCGCTCAGTaGGCTTGGGCTGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: VMLSCAGRGQCGKTEAYTAPRAQ*AWAASH
Trigger: GTGGGAGGCAGCCCAAGCGCACTGAGCGCGTGGAGC...TGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCAATGGTCAGGAACTaGTCCACGCGCTCAGTGCGC +
Preference number: 4 (lower is better)
Translates to: YTALLSEQLMCRQGWMWRAMVRN*STRSVR
Trigger: GCGCACTGAGCGCGTGGAGCAGTTCCTGACCATTGC...ACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGCATGCTCCTCCTaGCGCGGCGCCGCGCAATGG +
Preference number: 4 (lower is better)
Translates to: CGKTEAYTALLSEQLMCRQACSS*RGAAQW
Trigger: CCATTGCGCGGCGCCGCGGCAGGAGGAGCATGCCTG...TCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGACCTGTTCCCGCTTCCTaGGAAGGCGATTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRPVPAS*EGDSEA
Trigger: AGCTTCAGAATCGCCTTCGCAGGAAGCGGGAACAGG...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAATCGTTCTCGGGCTCCTaGTTACTGGGCAGGACGCCC +
Preference number: 4 (lower is better)
Translates to: AGRGQCGKTEAYTALLSESFSGS*LLGRTP
Trigger: GGGCGTCCTGCCCAGTAAGCAGGAGCCCGAGAACGA...TTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAGAGGCTGGCGGCAAATaGAATACAGGGCGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEEAGGK*NTGRWG
Trigger: ACCCCAACGCCCTGTATTGCATTTGCCGCCAGCCTC...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATAGAGGCTGGCGGCAAATaGAATACAGGGCGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: DVACRAVWLCNQTGMKRIEAGGK*NTGRWG
Trigger: ACCCCAACGCCCTGTATTGCATTTGCCGCCAGCCTC...TATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGAAACTTCATTGTCGCTaGGGCGTGTTTGAGGATACA +
Preference number: 4 (lower is better)
Translates to: ADRGGCGVPGSVAMQSDWKLHCR*GVFEDT
Trigger: TGTATCCTCAAACACGCCGCAGCGACAATGAAGTTT...CCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAAAAACTTCATTGTCGCTaGGGCGTGTTTGAGGATACA +
Preference number: 4 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQKLHCR*GVFEDT
Trigger: TGTATCCTCAAACACGCCGCAGCGACAATGAAGTTT...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp GCAAGAAAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCGCAGGGACCACCACTaGCTTCTTCACTGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: ARKPVTCRIPSPRHASCGRRDHH*LLHCGL
Trigger: GAGACCACAGTGAAGAAGGCAGTGGTGGTCCCTGCG...ACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTTTCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp ACCCAGACGCCTCTGCTCTTTATCGTGGATCAAAGTCCCTGGGGCTTTTGTGTGCGCAGGGACCACCACTaGCTTCTTCACTGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: TQTPLLFIVDQSPWGFCVRRDHH*LLHCGL
Trigger: GAGACCACAGTGAAGAAGGCAGTGGTGGTCCCTGCG...CACACAAAAGCCCCAGGGACTTTGATCCACGATAAAGAGCAGAGGCGTCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp TATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTTGCTTCCTTCCCGAGTaGTTCACTCCGCGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: YTALLSEQLMCRQGWMWRCFLPE*FTPRRD
Trigger: GTCCCTGCGCGGAGTGAAGCACTCGGGAAGGAAGCA...ACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CCAGACAGCACCTGCCTTTATGACGAAGCACTTCAGAGGACACTGTGTGATCCATGCTTCCTTCCCGAGTaGTTCACTCCGCGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PDSTCLYDEALQRTLCDPCFLPE*FTPRRD
Trigger: GTCCCTGCGCGGAGTGAAGCACTCGGGAAGGAAGCA...TGGATCACACAGTGTCCTCTGAAGTGCTTCGTCATAAAGGCAGGTGCTGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp AAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCAGGACGCTGCTCTCACAAGCTaGTTCCTTCCCGAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: KPVTCRIPSPRHASCGQDAALTS*FLPECF
Trigger: GAAGCACTCGGGAAGGAAGCAGCTTGTGAGAGCAGC...GTCCTGACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp AAGGCACGCGTCCTGCGGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGCTGCTCTCACAAGCTaGTTCCTTCCCGAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: KARVLRSGQCSRCELTYRAALTS*FLPECF
Trigger: GAAGCACTCGGGAAGGAAGCAGCTTGTGAGAGCAGC...ACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACCGCAGGACGCGTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CCAGACAGCACCTGCCTTTATGACGAAGCACTTCAGAGGACACTGTGTGATCCACCCACGACGGCGTGCTaGTCTCACAAGCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PDSTCLYDEALQRTLCDPPTTAC*SHKLLP
Trigger: AGGAAGCAGCTTGTGAGAGCAGCACGCCGTCGTGGG...TGGATCACACAGTGTCCTCTGAAGTGCTTCGTCATAAAGGCAGGTGCTGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp ACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCAGGACAGTGTTCTATCGCCCACGACGGCGTaGTGCTCTCACAAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: TCRIPSPRHASCGQDSVLSPTTA*CSHKLL
Trigger: AAGCAGCTTGTGAGAGCAGCACGCCGTCGTGGGCGA...TAGAACACTGTCCTGACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTCGCCCACGACGGCGTaGTGCTCTCACAAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: EAYTALLSEQLMCRQGWMSPTTA*CSHKLL
Trigger: AAGCAGCTTGTGAGAGCAGCACGCCGTCGTGGGCGA...CATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCATTTGTGAATTTGGCTaGGATGGTGCAGCACTCATA +
Preference number: 4 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTICEFG*DGAALI
Trigger: TATGAGTGCTGCACCATCGCAGCCAAATTCACAAAT...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp AGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTCCAAACTGTCTTCGGTaGGATCCTCCCACCAATGTG +
Preference number: 4 (lower is better)
Translates to: SSYRGRCFLLPCTWGEQTPNCLR*DPPTNV
Trigger: CACATTGGTGGGAGGATCGCACCGAAGACAGTTTGG...AGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACACGGCACCCCGTCCTCTaGTGTGGTTTTGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTRHPVL*CGFGLL
Trigger: CAGGAGCCCAAAACCACAGCAGAGGACGGGGTGCCG...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACACTCTTCCCGCTCGGCTaGAGCTGCTTCAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTLFPLG*SCFRSP
Trigger: AGGGCTCCTGAAGCAGCTGCAGCCGAGCGGGAAGAG...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAGGAGGTGGCCCATGTTaGCCCGAGAATAAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEGGGPC*PENKEG
Trigger: CCCTTCCTTATTCTCGGGGCAACATGGGCCACCTCC...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCTCGGAAGTCGGCCGATaGCCACTGTCCGTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLSEVGR*PLSVGL
Trigger: GAGGCCGACGGACAGTGGGCATCGGCCGACTTCCGA...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp AAGACCTCAGAGAAAAGAGCCCTTTCCATTCGAGCAGCTACAGAGGGCGGTGTTCCACTTCCCGGTGTGTaGTGGCTCCCGAGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: KTSEKRALSIRAATEGGVPLPGV*WLPSLS
Trigger: AGACAGACTCGGGAGCCAGCACACACCGGGAAGTGG...AACACCGCCCTCTGTAGCTGCTCGAATGGAAAGGGCTCTTTTCTCTGAGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp ACCATGGAAGTGTGTGAGATTTCACGCACACGCATTCATGTCAACAAGGACATCCCCTCCTTGTCCCGGTaGCATCCGGGAGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: TMEVCEISRTRIHVNKDIPSLSR*HPGGAG
Trigger: CCCAGCACCTCCCGGATGGCACCGGGACAAGGAGGG...GATGTCCTTGTTGACATGAATGCGTGTGCGTGAAATCTCACACACTTCCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp ACCCAGACGCCTCTGCTCTTTATCGTGGATCAAAGTCCCTGGGGCTTTTGTGTGATGCTCCCACATCAGTaGCCTGATGCAGACGGGCAG +
Preference number: 4 (lower is better)
Translates to: TQTPLLFIVDQSPWGFCVMLPHQ*PDADGQ
Trigger: CTGCCCGTCTGCATCAGGGCACTGATGTGGGAGCAT...CACACAAAAGCCCCAGGGACTTTGATCCACGATAAAGAGCAGAGGCGTCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp AATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGGGTGGCGGCTCCAGTaGGTCAGCCTCCGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: NVEKLKRIQRCCQNNSCAGWRLQ*VSLRVP
Trigger: GGGGACGCGGAGGCTGACCCACTGGAGCCGCCACCC...TGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAACGCGCTCAGTGCGCTTaGGCTGCCTCCCACTGCGCC +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQRAQCA*AASHCA
Trigger: GGCGCAGTGGGAGGCAGCCCAAGCGCACTGAGCGCG...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACATGGCGGGGCAGGACGTaGGCTCACCAGAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTWRGRT*AHQNPP
Trigger: TGGAGGATTCTGGTGAGCCCACGTCCTGCCCCGCCA...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGGGGCCGCTTCTaGTCTCAGAAGCGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGETGGRF*SQKRFP
Trigger: TGGAAAGCGCTTCTGAGACCAGAAGCGGCCCCCAGT...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGCTGTGGAAGCAGACTaGGGGCCGCTTCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: DSVLGVNSLTVGPMKQECAVEAD*GPLLVS
Trigger: TGAGACCAGAAGCGGCCCCCAGTCTGCTTCCACAGC...ACACTCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGGTGTGTAGCGTGTGCTGTGGAAGCAGACTaGGGGCCGCTTCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: QECVAFEVRMCSCGCVACAVEAD*GPLLVS
Trigger: TGAGACCAGAAGCGGCCCCCAGTCTGCTTCCACAGC...ACACGCTACACACCCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp ACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCAGGACAGTGTTCTAGTTCCTTCACAGCTGTaGAAGCAGACTGGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: TCRIPSPRHASCGQDSVLVPSQL*KQTGGR
Trigger: GCGGCCCCCAGTCTGCTTCCACAGCTGTGAAGGAAC...TAGAACACTGTCCTGACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp AAGGCACGCGTCCTGCGGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTTCGGAGGTGTCATCGTaGTCATCCCCTCCTTTCACC +
Preference number: 4 (lower is better)
Translates to: KARVLRSGQCSRCELTYRSEVSS*SSPPFT
Trigger: GGTGAAAGGAGGGGATGACCACGATGACACCTCCGA...ACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACCGCAGGACGCGTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTTCAGGGGCCTCTCAGTaGGCTCCTGTTCCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: HVLAVDNVEKLKRIQRCCSGASQ*APVPAS
Trigger: GGAAGCGGGAACAGGAGCCCACTGAGAGGCCCCTGA...ACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GCGTCCTGCGGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTTGCAATACAGGGCGTTaGGGTCGTAACCCTCACATT +
Preference number: 4 (lower is better)
Translates to: ASCGQDSVLGVNSLTVGPCNTGR*GRNPHI
Trigger: AATGTGAGGGTTACGACCCCAACGCCCTGTATTGCA...AGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACCGCAGGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp TCCTGGACATGGGCTCTGCTTCCCGCTGATGGTGCAGCCGGTGTCTGTGATCAGCAGAATGGTGCAGTTTaGGCAGATATAGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SWTWALLPADGAAGVCDQQNGAV*ADIVFP
Trigger: GGGGAAGACTATATCTGCCCAAACTGCACCATTCTG...CTGATCACAGACACCGGCTGCACCATCAGCGGGAAGCAGAGCCCATGTCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CAAGGACAAATGTCCTCAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTCTTTGAGGCTGCCATaGCTGCCGCTTTCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: QGQMSSGRSSYCCELHGSSLRLP*LPLSPR
Trigger: CCGAGGAGAAAGCGGCAGCCATGGCAGCCTCAAAGA...GGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTGAGGACATTTGTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAGACTGTGGCTACTTTTaGATAGGCCGGAACGTCCGC +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRDCGYF*IGRNVR
Trigger: GCGGACGTTCCGGCCTATCCAAAAGTAGCCACAGTC...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAATCGGGCAGGGCACCCTaGGCACCACGTGCCGAGAGC +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQSGRAP*APRAES
Trigger: GCTCTCGGCACGTGGTGCCCAGGGTGCCCTGCCCGA...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTGCCGGGTCTGGCCTGTaGCTCTCTGTCCCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCAGSGL*LSVPLC
Trigger: ACAGAGGGGGACAGAGAGCCACAGGCCAGACCCGGC...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAATGCCCTCGCCGGGTCTaGCCTGTGGCTCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKCPRRV*PVALCP
Trigger: GGGACAGAGAGCCACAGGCCAGACCCGGCGAGGGCA...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAAGCAGTGGCCTTCTCTaGCCTCCGAACTGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGESSGLL*PPNWKG
Trigger: GCCTTTCCAGTTCGGAGGCCAGAGAAGGCCACTGCT...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAACCCGTAGCCGCAGGGTaGACGCCTGCAGGTCACGCC +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQPVAAG*TPAGHA
Trigger: GGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGG...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTCAGCAGGAGGCATCCTaGACATGGGCTCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: VGPMKQECVAFEVRMCSCQQEAS*TWALLP
Trigger: GGGAAGCAGAGCCCATGTCCAGGATGCCTCCTGCTG...ACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp TCCTGGACATGGGCTCTGCTTCCCGCTGATGGTGCAGCCGGTGTCTGTGATCAGGATGCTTTCATGTGCTaGCCGTGGACAATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: SWTWALLPADGAAGVCDQDAFMC*PWTMWK
Trigger: TTTCCACATTGTCCACGGCCAGCACATGAAAGCATC...CTGATCACAGACACCGGCTGCACCATCAGCGGGAAGCAGAGCCCATGTCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GTCACGTGGAGCTGGCCAGAGCTCTTCACAAGCAACACCAAGAACCTCTACCAGCTTGCAACTGACCAGTaGGTCTTCACAGGTGCGGAG +
Preference number: 4 (lower is better)
Translates to: VTWSWPELFTSNTKNLYQLATDQ*VFTGAE
Trigger: CTCCGCACCTGTGAAGACCCACTGGTCAGTTGCAAG...CTGGTAGAGGTTCTTGGTGTTGCTTGTGAAGAGCTCTGGCCAGCTCCACGTGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CCAGACAGCACCTGCCTTTATGACGAAGCACTTCAGAGGACACTGTGTGATCCACTCACCCAGCACTTCTaGGGGCGTGACTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: PDSTCLYDEALQRTLCDPLTQHF*GRDSKL
Trigger: CAGCTTGGAGTCACGCCCCCAGAAGTGCTGGGTGAG...TGGATCACACAGTGTCCTCTGAAGTGCTTCGTCATAAAGGCAGGTGCTGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp ACCCAGACGCCTCTGCTCTTTATCGTGGATCAAAGTCCCTGGGGCTTTTGTGTGGGAAATGACGGGGGCTaGGCATGGTTAACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TQTPLLFIVDQSPWGFCVGNDGG*AWLTGR
Trigger: CCTGCCTGTTAACCATGCCCAGCCCCCGTCATTTCC...CACACAAAAGCCCCAGGGACTTTGATCCACGATAAAGAGCAGAGGCGTCTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395340.5
3UTR CAA 72 bp CAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTaGGGGAGAACAGACTGTGCACCCATGTTTATGGAC +
Preference number: 4 (lower is better)
Translates to: QLQRAVFPPALY*GRTDCAPMFMD
Trigger: GTCCATAAACATGGGTGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp ACCCTACAACCGTGCTCACCTGACAGCTCCAAGTTTGGAGATGAGCAGGGAGAGCTGCGAAGGCGATTCTaGAGCTCTTTCAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: TLQPCSPDSSKFGDEQGELRRRF*SSFKVR
Trigger: CCTGACCTTGAAAGAGCTTCAGAATCGCCTTCGCAG...CTCTCCCTGCTCATCTCCAAACTTGGAGCTGTCAGGTGAGCACGGTTGTAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp AAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCAGGACTCATCTTTGATGTCCTaGGCCGCCTTTCCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: KPVTCRIPSPRHASCGQDSSLMS*AAFPSN
Trigger: GTTGGAGGGAAAGGCGGCTCAGGACATCAAAGATGA...GTCCTGACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GCAAGAAAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCAGGCTCCTCATCTTTaGTGTCCTGAGCCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: ARKPVTCRIPSPRHASCGQAPHL*CPEPPF
Trigger: GAAAGGCGGCTCAGGACATCAAAGATGAGGAGCCTG...ACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTTTCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGCAGGCTCCTCATCTTTaGTGTCCTGAGCCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: GAYEAGVCGLRSSNVFMWQAPHL*CPEPPF
Trigger: GAAAGGCGGCTCAGGACATCAAAGATGAGGAGCCTG...CCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGACCCACACAATCGCCATaGAACCATTCTTCACAGCGG +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRPTQSP*NHSSQR
Trigger: CCGCTGTGAAGAATGGTTTCATGGCGATTGTGTGGG...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GACAGGGGAAACATGCCAGGACCTAGCCTTACACACACACACGCGCGCACATGCCAGGCTGGAAGATCTTaGGTTTCTTCTTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: DRGNMPGPSLTHTHARTCQAGRS*VSSCHL
Trigger: CAAGTGGCAAGAAGAAACTCAAGATCTTCCAGCCTG...GCATGTGCGCGCGTGTGTGTGTGTAAGGCTAGGTCCTGGCATGTTTCCCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CAAGAAAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCGGGGCCAATACATTTTaGGGCACCAGGCGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: QESQSHVEYQVQGTRPAVGANTF*GTRRLY
Trigger: ATAGAGGCGCCTGGTGCCTCAAAATGTATTGGCCCC...GACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAGGGGCCAATACATTTTaGGGCACCAGGCGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEGANTF*GTRRLY
Trigger: ATAGAGGCGCCTGGTGCCTCAAAATGTATTGGCCCC...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAGGATTTATACAACAGTaGCGGCGAGGGAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRGFIQQ*RRGSSS
Trigger: ACTGCTGCTCCCTCGCCGTCACTGTTGTATAAATCC...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAATGGGGATGGTGCCCTTaGAACCTGAGGGTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEWGWCP*NLRVAF
Trigger: AAAAGCCACCCTCAGGTTTCAAGGGCACCATCCCCA...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGGCCTGCCTGGCAGCTaGAGCACCACTCGATGGGGT +
Preference number: 4 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKGLPGS*STTRWG
Trigger: ACCCCATCGAGTGGTGCTTCAGCTGCCAGGCAGGCC...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp AAGACCTCAGAGAAAAGAGCCCTTTCCATTCGAGCAGCTACAGAGGGCGGTGTTCATCACCTCATCAGCTaGATCCGGAGCTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: KTSEKRALSIRAATEGGVHHLIS*IRSWVR
Trigger: CCTGACCCAGCTCCGGATTCAGCTGATGAGGTGATG...AACACCGCCCTCTGTAGCTGCTCGAATGGAAAGGGCTCTTTTCTCTGAGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTCCTCGCTCCACAAGCTaGGTGTCGAAGGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCPRSTS*VSKALS
Trigger: GGAGAGGGCCTTCGACACTCAGCTTGTGGAGCGAGG...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACACGGCCCTCTGCTGCCTaGGAGCTTCTTCTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTRPSAA*ELLLAP
Trigger: AGGAGCAAGAAGAAGCTCTCAGGCAGCAGAGGGCCG...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACGGGCAGTTTCAAACTaGCTAGGATGGGGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGRAVSN*LGWGPL
Trigger: AAGAGGGCCCCATCCTAGTCAGTTTGAAACTGCCCG...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp AGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTTCCCTGTTAGAGAAGTaGTCCCTGATGGAGCCACTT +
Preference number: 4 (lower is better)
Translates to: SSYRGRCFLLPCTWGEQTSLLEK*SLMEPL
Trigger: AAGTGGCTCCATCAGGGATCACTTCTCTAACAGGGA...AGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTGAGGGTGCTGCGGGGATCACCCTCAACCCTTaGCAAAGATGTATTTTAGGC +
Preference number: 4 (lower is better)
Translates to: QGDPATAVNCMAPEGAAGITLNP*QRCILG
Trigger: GCCTAAAATACATCTTTGTCAAGGGTTGAGGGTGAT...CCCCGCAGCACCCTCAGGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAAGCTCCACGCGCTCAGTaGGCTTGGGCTGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQAPRAQ*AWAASH
Trigger: GTGGGAGGCAGCCCAAGCGCACTGAGCGCGTGGAGC...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp AATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCACCAGGGAGACAGGCATaGTCCTCCTGCCGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: NVEKLKRIQRCCQNNSCAPGRQA*SSCRGA
Trigger: GGCGCCGCGGCAGGAGGAGCATGCCTGTCTCCCTGG...TGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTAAGCGCTTTCCACGCTaGCCTCGGAGGCTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCKRFPR*PRRLSR
Trigger: CCGAGACAGCCTCCGAGGGCAGCGTGGAAAGCGCTT...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGCCTGTTCCCGCTTCCTaGGAAGGCGATTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: QDSVLGVNSLTVGPMKQEPVPAS*EGDSEA
Trigger: AGCTTCAGAATCGCCTTCGCAGGAAGCGGGAACAGG...CTCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGGTGTGTTCGTTCTCGGGCTCCTaGTTACTGGGCAGGACGCCC +
Preference number: 4 (lower is better)
Translates to: YEAGVCGLRSSNVFMWVCSFSGS*LLGRTP
Trigger: GGGCGTCCTGCCCAGTAAGCAGGAGCCCGAGAACGA...ACACACCCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCTCGTTCTCGGGCTCCTaGTTACTGGGCAGGACGCCC +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLSFSGS*LLGRTP
Trigger: GGGCGTCCTGCCCAGTAAGCAGGAGCCCGAGAACGA...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp ACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCAGGACAGTGTTCTAGAGGCTGGCGGCAAATaGAATACAGGGCGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: TCRIPSPRHASCGQDSVLEAGGK*NTGRWG
Trigger: ACCCCAACGCCCTGTATTGCATTTGCCGCCAGCCTC...TAGAACACTGTCCTGACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTGAGGCTGGCGGCAAATaGAATACAGGGCGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: HGRVSHSFLRESLPPTGPEAGGK*NTGRWG
Trigger: ACCCCAACGCCCTGTATTGCATTTGCCGCCAGCCTC...AGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp TCCTGGACATGGGCTCTGCTTCCCGCTGATGGTGCAGCCGGTGTCTGTGATCAGGCACTTGCAGAATGGTaGAGTTTGGGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: SWTWALLPADGAAGVCDQALAEW*SLGRYS
Trigger: ACTATATCTGCCCAAACTGCACCATTCTGCAAGTGC...CTGATCACAGACACCGGCTGCACCATCAGCGGGAAGCAGAGCCCATGTCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACATGCTTCCTTCCCGAGTaGTTCACTCCGCGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTCFLPE*FTPRRD
Trigger: GTCCCTGCGCGGAGTGAAGCACTCGGGAAGGAAGCA...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGAGCTGCTCTCACAAGCTaGTTCCTTCCCGAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGAALTS*FLPECF
Trigger: GAAGCACTCGGGAAGGAAGCAGCTTGTGAGAGCAGC...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAACTTGGAGGCAGCCGTTaGCGCTGCAGGTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQLGGSR*RCRCRS
Trigger: GGACCGGCACCTGCAGCGGCAACGGCTGCCTCCAAG...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAAATTTGTGAATTTGGCTaGGATGGTGCAGCACTCATA +
Preference number: 4 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQICEFG*DGAALI
Trigger: TATGAGTGCTGCACCATCGCAGCCAAATTCACAAAT...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAATCGGGGATGGCCTCCTaGCTGGGGGCCGTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKSGMAS*LGAVFL
Trigger: CAAGAAGACGGCCCCCAGGCAGGAGGCCATCCCCGA...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCCGGAGGCCACGGCTGTaGATGAACTGCTTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLRRPRL*MNCLER
Trigger: CCGCTCCAAGCAGTTCATGCACAGCCGTGGCCTCCG...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCCGGCACCCCGTCCTCTaGTGTGGTTTTGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLRHPVL*CGFGLL
Trigger: CAGGAGCCCAAAACCACAGCAGAGGACGGGGTGCCG...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCCCGCTCGGCTGCAGCTaGTTCAGGAGCCCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLPLGCS*FRSPFH
Trigger: GTGGAAAGGGCTCCTGAAGCAGCTGCAGCCGAGCGG...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACAACGGCGGCCCTCTGCTaGCTGAGAGCTTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTTAALC*LRASSC
Trigger: GCAAGAAGAAGCTCTCAGGCAGCAGAGGGCCGCCGT...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGATTGCTGGAACAGCTCTaGCTTGGGCAAGGACGACTT +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRLLEQL*LGQGRL
Trigger: AAGTCGTCCTTGCCCAAGGCAGAGCTGTTCCAGCAA...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACGCCTTCCAGCCGTCCTaGTCGGACCCCGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHAFQPS*SDPAGG
Trigger: GCCCCCAGCGGGGTCCGAGCAGGACGGCTGGAAGGC...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTAGCGGGAAGCCGGGCTaGAGGGCGCCGCAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVSGKPG*RAPQGG
Trigger: ACCGCCTTGCGGCGCCCTGCAGCCCGGCTTCCCGCT...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAACACCTGCAGGGCTGCTaGTCCTTCCAGCAGAATGAA +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEHLQGC*SFQQNE
Trigger: TTCATTCTGCTGGAAGGAGCAGCAGCCCTGCAGGTG...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGATTCAAATTGGGATGGTaGCACTCCTCGTGGTCCACC +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRFKLGW*HSSWST
Trigger: GGTGGACCACGAGGAGTGGCACCATCCCAATTTGAA...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACAAAGGCGCGCCGCCTCTaGTTCCCAGAAATGGGGCTT +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTKARRL*FPEMGL
Trigger: AAGCCCCATTTCTGGGAAGCAGAGGCGGCGCGCCTT...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGACCAAGGCACGCGTCCTaGGGTCAGGACAGTGTTCTA +
Preference number: 4 (lower is better)
Translates to: SGQCSRCELTYRGAYEAGPRHAS*GQDSVL
Trigger: TAGAACACTGTCCTGACCGCAGGACGCGTGCCTTGG...TCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp ACCCTACAACCGTGCTCACCTGACAGCTCCAAGTTTGGAGATGAGCAGGGAGAGAGGTGCTGCAGTGTCTaGACTGAGTGCACACACTGT +
Preference number: 4 (lower is better)
Translates to: TLQPCSPDSSKFGDEQGERCCSV*TECTHC
Trigger: ACAGTGTGTGCACTCAGTGCAGACACTGCAGCACCT...CTCTCCCTGCTCATCTCCAAACTTGGAGCTGTCAGGTGAGCACGGTTGTAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CCAGACAGCACCTGCCTTTATGACGAAGCACTTCAGAGGACACTGTGTGATCCAAGGGAGGTGCTGAGGTaGTGCAGTGTCTGCACTGAG +
Preference number: 4 (lower is better)
Translates to: PDSTCLYDEALQRTLCDPREVLR*CSVCTE
Trigger: CTCAGTGCAGACACTGCAGCACCTCAGCACCTCCCT...TGGATCACACAGTGTCCTCTGAAGTGCTTCGTCATAAAGGCAGGTGCTGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGCGCGGCGCCGCGCAATaGTCAGGAACTGCTCCACGC +
Preference number: 4 (lower is better)
Translates to: GQCGKTEAYTALLSEQLMRGAAQ*SGTAPR
Trigger: GCGTGGAGCAGTTCCTGACCATTGCGCGGCGCCGCG...CATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp ACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCAGGACAGTGTTCTAACTGGGGGCCGCTTCTaGTCTCAGAAGCGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: TCRIPSPRHASCGQDSVLTGGRF*SQKRFP
Trigger: TGGAAAGCGCTTCTGAGACCAGAAGCGGCCCCCAGT...TAGAACACTGTCCTGACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGTCGGAGGTGTCATCGTaGTCATCCCCTCCTTTCACC +
Preference number: 4 (lower is better)
Translates to: GQDSVLGVNSLTVGPMKQSEVSS*SSPPFT
Trigger: GGTGAAAGGAGGGGATGACCACGATGACACCTCCGA...CTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp ACCCAGACGCCTCTGCTCTTTATCGTGGATCAAAGTCCCTGGGGCTTTTGTGTGTCGGAGGTGTCATCGTaGTCATCCCCTCCTTTCACC +
Preference number: 4 (lower is better)
Translates to: TQTPLLFIVDQSPWGFCVSEVSS*SSPPFT
Trigger: GGTGAAAGGAGGGGATGACCACGATGACACCTCCGA...CACACAAAAGCCCCAGGGACTTTGATCCACGATAAAGAGCAGAGGCGTCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTTCAGGGGCCTCTCAGTaGGCTCCTGTTCCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCSGASQ*APVPAS
Trigger: GGAAGCGGGAACAGGAGCCCACTGAGAGGCCCCTGA...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTTTCCGCAGGCGACTCTaGATCCCTTTCAGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: HVLAVDNVEKLKRIQRCCFRRRL*IPFRGL
Trigger: GAGGCCCCTGAAAGGGATCCAGAGTCGCCTGCGGAA...ACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GTTTCCCCTGAGGGCACAGCTGGGCACCTTCAGGCCTTCACTTGCTTAAGTGTGTGCAATACAGGGCGTTaGGGTCGTAACCCTCACATT +
Preference number: 4 (lower is better)
Translates to: VSPEGTAGHLQAFTCLSVCNTGR*GRNPHI
Trigger: AATGTGAGGGTTACGACCCCAACGCCCTGTATTGCA...CACACTTAAGCAAGTGAAGGCCTGAAGGTGCCCAGCTGTGCCCTCAGGGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GCGTCCTGCGGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTCTACCCTTTATCCCTTaGTCTTCGCTAGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: ASCGQDSVLGVNSLTVGPLPFIP*SSLDFC
Trigger: GCAGAAGTCTAGCGAAGACCAAGGGATAAAGGGTAG...AGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACCGCAGGACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp TCCTGGACATGGGCTCTGCTTCCCGCTGATGGTGCAGCCGGTGTCTGTGATCAGGCCTCTATCACAGGCTaGAAGATCTTGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SWTWALLPADGAAGVCDQASITG*KILSFF
Trigger: GAAGAAACTCAAGATCTTCCAGCCTGTGATAGAGGC...CTGATCACAGACACCGGCTGCACCATCAGCGGGAAGCAGAGCCCATGTCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GCCAAGTCAAGTAATCAGTACGTGAAGCGGGCCGAGTACCCGATGGCCTGGCCCGCCTCTATCACAGGCTaGAAGATCTTGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: AKSSNQYVKRAEYPMAWPASITG*KILSFF
Trigger: GAAGAAACTCAAGATCTTCCAGCCTGTGATAGAGGC...GGGCCAGGCCATCGGGTACTCGGCCCGCTTCACGTACTGATTACTTGACTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACAAGCCAGGGAACTTCTTaGAGGCAGCCGTTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTSQGTS*RQPLPL
Trigger: CAGCGGCAACGGCTGCCTCCAAGAAGTTCCCTGGCT...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGACATCACAGATCTCGCTaGCCTCTCTTTCCACGTGGA +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRHHRSR*PLFPRG
Trigger: TCCACGTGGAAAGAGAGGCCAGCGAGATCTGTGATG...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAATGCTTGGAGCGGTCCTaGGGTCCCGGCCGGACACTG +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQCLERS*GPGRTL
Trigger: CAGTGTCCGGCCGGGACCCCAGGACCGCTCCAAGCA...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACACCTCCTCTTCCTCTGTaGCGGGGTGGAAGCGGATCA +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTPPLPL*RGGSGS
Trigger: TGATCCGCTTCCACCCCGCCACAGAGGAAGAGGAGG...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGAGCGGTGATGCTGTTTTaGAAGCAGACGAAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGAVMLF*KQTKRW
Trigger: CCACCGCTTCGTCTGCTTCCAAAACAGCATCACCGC...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAGGGCAAGGACGACTTTaGTGGTGGAGACATCAAGGC +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEGQGRL*WWRHQG
Trigger: GCCTTGATGTCTCCACCACCAAAGTCGTCCTTGCCC...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGGACAGGCCCAGGGGATaGCTATCCAGAAAGAACGGG +
Preference number: 4 (lower is better)
Translates to: EAYTALLSEQLMCRQGWMDRPRG*LSRKNG
Trigger: CCCGTTCTTTCTGGATAGCCATCCCCTGGGCCTGTC...CATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGAGGCATCCTGGACATaGGCTCTGCTTCCCGCTGAT +
Preference number: 4 (lower is better)
Translates to: VGPMKQECVAFEVRMCSCEASWT*ALLPAD
Trigger: ATCAGCGGGAAGCAGAGCCCATGTCCAGGATGCCTC...ACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAGCAGGAGGCATCCTaGACATGGGCTCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: AGRGQCGKTEAYTALLSEQQEAS*TWALLP
Trigger: GGGAAGCAGAGCCCATGTCCAGGATGCCTCCTGCTG...TTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CCAGACAGCACCTGCCTTTATGACGAAGCACTTCAGAGGACACTGTGTGATCCAAAGCCGGCGCTTACCTaGTCCCTCAAAGGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: PDSTCLYDEALQRTLCDPKPALT*SLKGQE
Trigger: CTCTTGCCCTTTGAGGGACCAGGTAAGCGCCGGCTT...TGGATCACACAGTGTCCTCTGAAGTGCTTCGTCATAAAGGCAGGTGCTGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp AAGACCTCAGAGAAAAGAGCCCTTTCCATTCGAGCAGCTACAGAGGGCGGTGTTGACAGTGTGGGTGGTTaGTGCCATCGCACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: KTSEKRALSIRAATEGGVDSVGG*CHRTQQ
Trigger: CTGCTGAGTGCGATGGCACCAACCACCCACACTGTC...AACACCGCCCTCTGTAGCTGCTCGAATGGAAAGGGCTCTTTTCTCTGAGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp ACCATGGAAGTGTGTGAGATTTCACGCACACGCATTCATGTCAACAAGGACATCCGTCAGGCGGCGTCGTaGCCTCAGCAAGTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: TMEVCEISRTRIHVNKDIRQAAS*PQQVPW
Trigger: CCAAGGCACTTGCTGAGGCCACGACGCCGCCTGACG...GATGTCCTTGTTGACATGAATGCGTGTGCGTGAAATCTCACACACTTCCATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp AGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTGCACCCATGTTTATaGACCGAGGTTACTCCACAG +
Preference number: 4 (lower is better)
Translates to: SSYRGRCFLLPCTWGEQTVHPCL*TEVTPQ
Trigger: CTGTGGAGTAACCTCGGTCCATAAACATGGGTGCAC...AGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp GGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATACGAATACTTACCAGAGGGCCGACGCCTTTTaGCTCTGGCGCCAACCCGTA +
Preference number: 4 (lower is better)
Translates to: GSVAMQSDWDEENTNTYQRADAF*LWRQPV
Trigger: TACGGGTTGGCGCCAGAGTCAAAAGGCGTCGGCCCT...CTGGTAAGTATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370371.8
CDS-3UTR TCA 90 bp CTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTGCAAACCCCATGTTTTCCTaGACTCTTTGCTGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: LQRAVFPPALYLGRTDCANPMFS*TLCWWV
Trigger: AACCCACCAGCAAAGAGTTCAGGAAAACATGGGGTT...TGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp GCAAGAAAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCTGCGAAGGCGATTCTaGAGCTCTTTCAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: ARKPVTCRIPSPRHASCGLRRRF*SSFKVR
Trigger: CCTGACCTTGAAAGAGCTTCAGAATCGCCTTCGCAG...ACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTTTCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp CTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATCCCACACAATCGCCATaGAACCATTCTTCACAGCGG +
Preference number: 4 (lower is better)
Translates to: LTYRGAYEAGVCGLRSSNPTQSP*NHSSQR
Trigger: CCGCTGTGAAGAATGGTTTCATGGCGATTGTGTGGG...ATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACGGTAAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GTCACGTGGAGCTGGCCAGAGCTCTTCACAAGCAACACCAAGAACCTCTACCAGCGATGGAAGAGTCCCTaGTTTTTAGGGTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VTWSWPELFTSNTKNLYQRWKSP*FLGSFR
Trigger: CCTGAAGGACCCTAAAAATCAGGGACTCTTCCATCG...CTGGTAGAGGTTCTTGGTGTTGCTTGTGAAGAGCTCTGGCCAGCTCCACGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp AAGACCTCAGAGAAAAGAGCCCTTTCCATTCGAGCAGCTACAGAGGGCGGTGTTCTCTTGCTGTTCCTCTaGATCCGACACTGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: KTSEKRALSIRAATEGGVLLLFL*IRHWRR
Trigger: TCTCCGCCAGTGTCGGATTCAGAGGAACAGCAAGAG...AACACCGCCCTCTGTAGCTGCTCGAATGGAAAGGGCTCTTTTCTCTGAGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAATATATTCGGACGTGGTaGCTCAAGACCTGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEYIRTW*LKTWSL
Trigger: GAGGGACCAGGTCTTGAGTCACCACGTCCGAATATA...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGATGTGAATCTTGGTGGTaGATGGACCCTCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRCESWW*MDPLVF
Trigger: GAAGACCAGAGGGTCCATTCACCACCAAGATTCACA...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TCCTGGACATGGGCTCTGCTTCCCGCTGATGGTGCAGCCGGTGTCTGTGATCAGACAATGTGGAAAAACTaGAGCGTATACAGCGCTGTT +
Preference number: 4 (lower is better)
Translates to: SWTWALLPADGAAGVCDQTMWKN*SVYSAV
Trigger: AACAGCGCTGTATACGCTTCAGTTTTTCCACATTGT...CTGATCACAGACACCGGCTGCACCATCAGCGGGAAGCAGAGCCCATGTCCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp AGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTCTACGCCCTCAAAGATaGATCCTATTGCTAACCGCT +
Preference number: 4 (lower is better)
Translates to: SSYRGRCFLLPCTWGEQTLRPQR*ILLLTA
Trigger: AGCGGTTAGCAATAGGATTCATCTTTGAGGGCGTAG...AGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CAAGGACAAATGTCCTCAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTCCACACACCCGCTTTaGGAGAACACCAATCCTCTG +
Preference number: 4 (lower is better)
Translates to: QGQMSSGRSSYCCELHGSSTHPL*ENTNPL
Trigger: CAGAGGATTGGTGTTCTCTCAAAGCGGGTGTGTGGA...GGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTGAGGACATTTGTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp AAGACCTCAGAGAAAAGAGCCCTTTCCATTCGAGCAGCTACAGAGGGCGGTGTTAACACAGGCATAGGCTaGGCCCACTCCAGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: KTSEKRALSIRAATEGGVNTGIG*AHSSCE
Trigger: TTCACAGCTGGAGTGGGCTCAGCCTATGCCTGTGTT...AACACCGCCCTCTGTAGCTGCTCGAATGGAAAGGGCTCTTTTCTCTGAGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp GATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATATTTGATGGCCTTAGGTaGCTCCTCATTGCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: DVACRAVWLCNQTGMKRIFDGLR*LLIARV
Trigger: GACCCGAGCAATGAGGAGGCACCTAAGGCCATCAAA...TATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp AATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAAGCCTCCGCGTCCCCTaGGCCCTCTCGCTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: NVEKLKRIQRCCQNNSCASLRVP*ALSLGD
Trigger: ATCGCCAAGCGAGAGGGCGCAGGGGACGCGGAGGCT...TGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTGCAATGGTCAGGAACTaGTCCACGCGCTCAGTGCGC +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCAMVRN*STRSVR
Trigger: GCGCACTGAGCGCGTGGAGCAGTTCCTGACCATTGC...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGCCTGTTCCCGCTTCCTaGGAAGGCGATTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: EAYTALLSEQLMCRQGWMPVPAS*EGDSEA
Trigger: AGCTTCAGAATCGCCTTCGCAGGAAGCGGGAACAGG...CATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GCGTCCTGCGGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTAAACTTCATTGTCGCTaGGGCGTGTTTGAGGATACA +
Preference number: 4 (lower is better)
Translates to: ASCGQDSVLGVNSLTVGPKLHCR*GVFEDT
Trigger: TGTATCCTCAAACACGCCGCAGCGACAATGAAGTTT...AGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACCGCAGGACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAAGGTGCAGAGCTGTCATaGTTTGATTTTAAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQGAELS*FDFKSS
Trigger: AGAAGACTTAAAATCAAAGCATGACAGCTCTGCACC...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCCGGCTGTGCATGAACTaGTTGGAGCGGTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLRLCMN*LERSWG
Trigger: ACCCCAGGACCGCTCCAAGCAGTTCATGCACAGCCG...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCCTTCCACCATGTGGGTaGTGTCTGGGCGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLLPPCG*CLGGML
Trigger: CAGCATCCCGCCCAGACAGCACCCACATGGTGGAAG...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACCTCCTGGGGGAGACCTaGGGTGGACCCGGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHLLGET*GGPGRL
Trigger: GAGCCTCCCGGGTCCACCGCAGGTCTCCCCCAGGAG...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTACGGCGGCCCTCTGCTaGCTGAGAGCTTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCTAALC*LRASSC
Trigger: GCAAGAAGAAGCTCTCAGGCAGCAGAGGGCCGCCGT...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCGCCAGGCGCCTCGCCTaGCGGGGGTCCCTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCARRLA*RGSLWF
Trigger: AAACCACAGGGACCCCCGGCAGGCGAGGCGCCTGGC...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACAGGAGGTGGCCCATGTTaGCCCGAGAATAAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTGGGPC*PENKEG
Trigger: CCCTTCCTTATTCTCGGGGCAACATGGGCCACCTCC...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCCAGAAATGGGGCTTaGTCTGTCCCTTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGPRNGA*SVPSNW
Trigger: CCAGTTTGAAGGGACAGAGCAAGCCCCATTTCTGGG...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAATCAAACCGCTCTCTCTaGCTCCCTTCGAAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGESNRSL*LPSKVW
Trigger: CCAGACTTTCGAAGGGAGGCAGAGAGAGCGGTTTGA...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCCGCAGGGTGGACGCCTaGAGGTCACGCCCACACCGG +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCRRVDA*RSRPHR
Trigger: CCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCG...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGCGGGCAGTGTGGCTATaGAATCAGACTGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: SLTVGPMKQECVAFEVRMRAVWL*NQTGMK
Trigger: CTTCATCCCAGTCTGATTGCATAGCCACACTGCCCG...CATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACGGTAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp AAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCAGGACAGTGATGCTTTCATGTaGTGGCCGTGGACAATGTGG +
Preference number: 4 (lower is better)
Translates to: KPVTCRIPSPRHASCGQDSDAFM*WPWTMW
Trigger: CCACATTGTCCACGGCCAGCACATGAAAGCATCACT...GTCCTGACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp AAGGCACGCGTCCTGCGGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTAGTGATGCTTTCATGTaGTGGCCGTGGACAATGTGG +
Preference number: 4 (lower is better)
Translates to: KARVLRSGQCSRCELTYRSDAFM*WPWTMW
Trigger: CCACATTGTCCACGGCCAGCACATGAAAGCATCACT...ACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACCGCAGGACGCGTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCCAAGGCACGCGTCCTaGGGTCAGGACAGTGTTCTA +
Preference number: 4 (lower is better)
Translates to: HVLAVDNVEKLKRIQRCCPRHAS*GQDSVL
Trigger: TAGAACACTGTCCTGACCGCAGGACGCGTGCCTTGG...ACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GACAGGGGAAACATGCCAGGACCTAGCCTTACACACACACACGCGCGCACATGCTTACCCAGACGCCTCTaGTCTTTATCGTGGATCAAA +
Preference number: 4 (lower is better)
Translates to: DRGNMPGPSLTHTHARTCLPRRL*SLSWIK
Trigger: TTTGATCCACGATAAAGAGCAGAGGCGTCTGGGTAA...GCATGTGCGCGCGTGTGTGTGTGTAAGGCTAGGTCCTGGCATGTTTCCCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CTGTCCAAGGGCTTCTGGGCTATCTCCGTGAGGACAGGGTCCGCTGAGACAGGGTTTTCTAAAGTCCCTTaGCCTGTGTTACTTTACCCA +
Preference number: 4 (lower is better)
Translates to: LSKGFWAISVRTGSAETGFSKVP*PVLLYP
Trigger: TGGGTAAAGTAACACAGGGCAAGGGACTTTAGAAAA...CCCTGTCTCAGCGGACCCTGTCCTCACGGAGATAGCCCAGAAGCCCTTGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTACTGGGGGCCGCTTCTaGTCTCAGAAGCGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: HVLAVDNVEKLKRIQRCCTGGRF*SQKRFP
Trigger: TGGAAAGCGCTTCTGAGACCAGAAGCGGCCCCCAGT...ACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GTTTCCCCTGAGGGCACAGCTGGGCACCTTCAGGCCTTCACTTGCTTAAGTGTGCAGAATGGTGCAGTTTaGGCAGATATAGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: VSPEGTAGHLQAFTCLSVQNGAV*ADIVFP
Trigger: GGGGAAGACTATATCTGCCCAAACTGCACCATTCTG...CACACTTAAGCAAGTGAAGGCCTGAAGGTGCCCAGCTGTGCCCTCAGGGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAAACAGAAGGTACCACTaGCTTCCTTACGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGENRRYH*LPYGSH
Trigger: GTGGGAGCCGTAAGGAAGCCAGTGGTACCTTCTGTT...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCCCTCCAGATCGGGGATaGCCTCCTGCCTGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCPPDRG*PPAWGP
Trigger: CGGCCCCCAGGCAGGAGGCCATCCCCGATCTGGAGG...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGCCTCCAGATCGGGGATaGCCTCCTGCCTGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQPPDRG*PPAWGP
Trigger: CGGCCCCCAGGCAGGAGGCCATCCCCGATCTGGAGG...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGATGGAACAGGGTCCTaGGCGCTCAGCGGGATCAGG +
Preference number: 4 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKDGTGS*ALSGIR
Trigger: CCTGATCCCGCTGAGCGCCCAGGACCCTGTTCCATC...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACACTCCTCAGGGTCGTATaGCCTGTCGTCCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTLLRVV*PVVLLF
Trigger: GAAGAGGAGGACGACAGGCCATACGACCCTGAGGAG...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGCCGAGAAGTGGGCCATaGAGACCCCGACGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQPRSGP*RPRRRP
Trigger: GGGCCGCCGTCGGGGTCTCCATGGCCCACTTCTCGG...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAACAAGGACGACTTTGGTaGTGGAGACATCAAGGCGTC +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEQGRLW*WRHQGV
Trigger: GACGCCTTGATGTCTCCACCACCAAAGTCGTCCTTG...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAACCACGAGGCCACCCCTaGAAGCATCTCTCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKPRGHP*KHLSRA
Trigger: TGCCCGAGAGAGATGCTTCCAGGGGTGGCCTCGTGG...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTACTGGCATGGGCGCCTaGCCCACGAGGCCACCCCTG +
Preference number: 4 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVTGMGA*PTRPPL
Trigger: CAGGGGTGGCCTCGTGGGCCAGGCGCCCATGCCAGT...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAATCTGGGCTCCGAATCTaGCTGGCGGAGGCCCTCGTG +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQSGLRI*LAEALV
Trigger: CACGAGGGCCTCCGCCAGCCAGATTCGGAGCCCAGA...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCGTCCTTCAAACTGGTTaGGATGAGGGCCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLVLQTG*DEGPGQ
Trigger: CTGCCCGGGGCCCTCATCCCAACCAGTTTGAAGGAC...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGAAATGCCCCTGGGACCTaGCATAAAGTTAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGNAPGT*HKVRRL
Trigger: CAAGCGCCTAACTTTATGCCAGGTCCCAGGGGCATT...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCGACAGGCCCAGGGGATaGCTATCCAGAAAGAACGGG +
Preference number: 4 (lower is better)
Translates to: CFHVLAVDNVEKLKRIQRDRPRG*LSRKNG
Trigger: CCCGTTCTTTCTGGATAGCCATCCCCTGGGCCTGTC...GCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp TATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGGTGTGTGCGTGCCGGGCAGTGTaGCTATGCAATCAGACTGGG +
Preference number: 4 (lower is better)
Translates to: YEAGVCGLRSSNVFMWVCACRAV*LCNQTG
Trigger: CCCAGTCTGATTGCATAGCCACACTGCCCGGCACGC...ACACACCCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTGTGGATCAAAGTCCCTaGGGCTTTTGTGTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: HGRVSHSFLRESLPPTGPVDQSP*GFCVSP
Trigger: CGGGGACACACAAAAGCCCCAGGGACTTTGATCCAC...AGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTCTGTCCAAGGGCTTCTaGGCTATCTCCGTGAGGACA +
Preference number: 4 (lower is better)
Translates to: HGRVSHSFLRESLPPTGPLSKGF*AISVRT
Trigger: TGTCCTCACGGAGATAGCCCAGAAGCCCTTGGACAG...AGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp ACCCTACAACCGTGCTCACCTGACAGCTCCAAGTTTGGAGATGAGCAGGGAGAGTACCTGCTCCAACACTaGAAGCTTGGACACTTTTCC +
Preference number: 4 (lower is better)
Translates to: TLQPCSPDSSKFGDEQGEYLLQH*KLGHFS
Trigger: GGAAAAGTGTCCAAGCTTTCAGTGTTGGAGCAGGTA...CTCTCCCTGCTCATCTCCAAACTTGGAGCTGTCAGGTGAGCACGGTTGTAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAATGGGACACAACCCCCTaGTCGTTCTCGGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQWDTTP*SFSGSC
Trigger: GCAGGAGCCCGAGAACGATCAGGGGGTTGTGTCCCA...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTCATCTTTGATGTCCTaGGCCGCCTTTCCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: EAYTALLSEQLMCRQGWMSSLMS*AAFPSN
Trigger: GTTGGAGGGAAAGGCGGCTCAGGACATCAAAGATGA...CATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACACAGGCTCCTCATCTTTaGTGTCCTGAGCCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTQAPHL*CPEPPF
Trigger: GAAAGGCGGCTCAGGACATCAAAGATGAGGAGCCTG...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGCTGATCTGCCGTTTCTaGATGAGTCTCATCCTGCAC +
Preference number: 4 (lower is better)
Translates to: GAYEAGVCGLRSSNVFMWLICRF*MSLILH
Trigger: GTGCAGGATGAGACTCATTCAGAAACGGCAGATCAG...CCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp CAAGAAAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCCTGATCTGCCGTTTCTaGATGAGTCTCATCCTGCAC +
Preference number: 4 (lower is better)
Translates to: QESQSHVEYQVQGTRPAVLICRF*MSLILH
Trigger: GTGCAGGATGAGACTCATTCAGAAACGGCAGATCAG...GACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTTTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTTCGCTGCGGCGTGTTTaGGGATACAGTCATTACTGC +
Preference number: 4 (lower is better)
Translates to: VGPMKQECVAFEVRMCSCSLRRV*GYSHYC
Trigger: GCAGTAATGACTGTATCCTCAAACACGCCGCAGCGA...ACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GCCAAGTCAAGTAATCAGTACGTGAAGCGGGCCGAGTACCCGATGGCCTGGCCCAGTCATCGCTGTCATTaGCTCTTTTCCACAAAATCT +
Preference number: 4 (lower is better)
Translates to: AKSSNQYVKRAEYPMAWPSHRCH*LFSTKS
Trigger: AGATTTTGTGGAAAAGAGTCAATGACAGCGATGACT...GGGCCAGGCCATCGGGTACTCGGCCCGCTTCACGTACTGATTACTTGACTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTCATCACCTCATCAGCTaGATCCGGAGCTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCHHLIS*IRSWVR
Trigger: CCTGACCCAGCTCCGGATTCAGCTGATGAGGTGATG...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAAGGCCACGGCTGTGCATaGACTGCTTGGAGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQGHGCA*TAWSGP
Trigger: AGGACCGCTCCAAGCAGTTCATGCACAGCCGTGGCC...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACAAGCGGCCACGGCTGCTaGAATAGGAGTAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTSGHGC*NRSRER
Trigger: TCTCTCTCTACTCCTATTTCAGCAGCCGTGGCCGCT...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAACGGCCCTCTGCTGCCTaGGAGCTTCTTCTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKRPSAA*ELLLAP
Trigger: AGGAGCAAGAAGAAGCTCTCAGGCAGCAGAGGGCCG...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GCGTCCTGCGGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTAGGCCAACCCCTAGGTaGTACATACATTTATACAAC +
Preference number: 4 (lower is better)
Translates to: ASCGQDSVLGVNSLTVGPRPTPR*YIHLYN
Trigger: GTTGTATAAATGTATGTATCACCTAGGGGTTGGCCT...AGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACCGCAGGACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAGGCCAACCCCTAGGTaGTACATACATTTATACAAC +
Preference number: 4 (lower is better)
Translates to: GGCGVPGSVAMQSDWDEERPTPR*YIHLYN
Trigger: GTTGTATAAATGTATGTATCACCTAGGGGTTGGCCT...CTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GCGTCCTGCGGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTACAATGTGGAAAAACTaGAGCGTATACAGCGCTGTT +
Preference number: 4 (lower is better)
Translates to: ASCGQDSVLGVNSLTVGPTMWKN*SVYSAV
Trigger: AACAGCGCTGTATACGCTTCAGTTTTTCCACATTGT...AGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACCGCAGGACGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GACAGGGGAAACATGCCAGGACCTAGCCTTACACACACACACGCGCGCACATGCAGACAATTTATGCTGTaGATCAGGGGTACTTCTCGT +
Preference number: 4 (lower is better)
Translates to: DRGNMPGPSLTHTHARTCRQFML*IRGTSR
Trigger: ACGAGAAGTACCCCTGATTCACAGCATAAATTGTCT...GCATGTGCGCGCGTGTGTGTGTGTAAGGCTAGGTCCTGGCATGTTTCCCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTACAACCGTGCTCACCTaGCAGCTCCAAGTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: HGRVSHSFLRESLPPTGPTTVLT*QLQVWR
Trigger: TCTCCAAACTTGGAGCTGTCAGGTGAGCACGGTTGT...AGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp ACCCAGACGCCTCTGCTCTTTATCGTGGATCAAAGTCCCTGGGGCTTTTGTGTGTCACTCTTTTCTGCGTaGATCTCTACCCCCAACAGG +
Preference number: 4 (lower is better)
Translates to: TQTPLLFIVDQSPWGFCVSLFSA*ISTPNR
Trigger: CCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGA...CACACAAAAGCCCCAGGGACTTTGATCCACGATAAAGAGCAGAGGCGTCTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp GTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTTTTGATGGCCTTAGGTaGCTCCTCATTGCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: VGPMKQECVAFEVRMCSCFDGLR*LLIARV
Trigger: GACCCGAGCAATGAGGAGGCACCTAAGGCCATCAAA...ACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp AAGACCTCAGAGAAAAGAGCCCTTTCCATTCGAGCAGCTACAGAGGGCGGTGTTTTTGATGGCCTTAGGTaGCTCCTCATTGCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: KTSEKRALSIRAATEGGVFDGLR*LLIARV
Trigger: GACCCGAGCAATGAGGAGGCACCTAAGGCCATCAAA...AACACCGCCCTCTGTAGCTGCTCGAATGGAAAGGGCTCTTTTCTCTGAGGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGTCAGTGCGCTTGGGCTaGCTCCCACTGCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQSVRLG*LPLRRR
Trigger: CCTGCGGCGCAGTGGGAGGCAGCCCAAGCGCACTGA...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCAAAGCGCTTTCCACGCTaGCCTCGGAGGCTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: VDNVEKLKRIQRCCQNNSKRFPR*PRRLSR
Trigger: CCGAGACAGCCTCCGAGGGCAGCGTGGAAAGCGCTT...TGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACCTGTTCCCGCTTCCTaGGAAGGCGATTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: AGRGQCGKTEAYTALLSEPVPAS*EGDSEA
Trigger: AGCTTCAGAATCGCCTTCGCAGGAAGCGGGAACAGG...TTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGCTCGAGCCTCAGAAATaGCCACACAATCGCCATGAA +
Preference number: 4 (lower is better)
Translates to: GQDSVLGVNSLTVGPMKQLEPQK*PHNRHE
Trigger: TTCATGGCGATTGTGTGGGCATTTCTGAGGCTCGAG...CTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTGAGGGTGCTGCGGGGTCTTCGCTAGACTTCTaGTCTATTGTTCCTATACTT +
Preference number: 4 (lower is better)
Translates to: QGDPATAVNCMAPEGAAGSSLDF*SIVPIL
Trigger: AAGTATAGGAACAATAGAGCAGAAGTCTAGCGAAGA...CCCCGCAGCACCCTCAGGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp TGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGCTTGCCACTTGGATTTaGAGCTTTCTCAATTCTACC +
Preference number: 4 (lower is better)
Translates to: CQNNSCADRGGCGVPGSVLATWI*SFLNST
Trigger: GGTAGAATTGAGAAAGCTGCAAATCCAAGTGGCAAG...CACACTGCCCGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGGGATACAGTCATTACTaGAGTACACCGAGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: SLTVGPMKQECVAFEVRMGYSHY*STPSRA
Trigger: AGCCCGACTCGGTGTACTGCAGTAATGACTGTATCC...CATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACGGTAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAGGATACAGTCATTACTaGAGTACACCGAGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEGYSHY*STPSRA
Trigger: AGCCCGACTCGGTGTACTGCAGTAATGACTGTATCC...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCCGCAGGGACCACCACTaGCTTCTTCACTGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLRRDHH*LLHCGL
Trigger: GAGACCACAGTGAAGAAGGCAGTGGTGGTCCCTGCG...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GTGATGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACATGCTTCCTTCCCGAGTaGTTCACTCCGCGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: VMLSCAGRGQCGKTEAYTCFLPE*FTPRRD
Trigger: GTCCCTGCGCGGAGTGAAGCACTCGGGAAGGAAGCA...TGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAAGCTGCTCTCACAAGCTaGTTCCTTCCCGAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: AGRGQCGKTEAYTALLSEAALTS*FLPECF
Trigger: GAAGCACTCGGGAAGGAAGCAGCTTGTGAGAGCAGC...TTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GTGATGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACACCCACGACGGCGTGCTaGTCTCACAAGCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: VMLSCAGRGQCGKTEAYTPTTAC*SHKLLP
Trigger: AGGAAGCAGCTTGTGAGAGCAGCACGCCGTCGTGGG...TGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAGGCTGGTGTGGCTGCTaGCACATTAGCAAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEGWCGC*HISKRR
Trigger: TCTTCTTTTGCTAATGTGGCAGCAGCCACACCAGCC...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTCTTGGAGGCAGCCGTTaGCGCTGCAGGTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVLGGSR*RCRCRS
Trigger: GGACCGGCACCTGCAGCGGCAACGGCTGCCTCCAAG...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTATTTGGCTGCGATGGTaGAGCACTCATAGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: HGRVSHSFLRESLPPTGPIWLRW*STHSPK
Trigger: CTTGGGGCTATGAGTGCTGCACCATCGCAGCCAAAT...AGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGAGGCTTCTTTTCCGACTaGGGGACTGTGGCTACTTTT +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGGFFSD*GTVATF
Trigger: AAAAGTAGCCACAGTCCCGCAGTCGGAAAAGAAGCC...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGAGCGGTGGAGGAAGCTaGCGTGGAGGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQSGGGS*RGGCRC
Trigger: GCAGCGGCAGCCTCCACGGCAGCTTCCTCCACCGCT...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCAGCGGTGGAGGAAGCTaGCGTGGAGGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCSGGGS*RGGCRC
Trigger: GCAGCGGCAGCCTCCACGGCAGCTTCCTCCACCGCT...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGATTTCCAAAGAGAGTCTaGAGGATGTGCTCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGFPKRV*RMCSSG
Trigger: ACCGCTGGAGCACATCCTGCAGACTCTCTTTGGAAA...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACAGGCTTGTCTGCAGACTaGTGCTCTTGCTGGAACAGC +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTGLSAD*CSCWNS
Trigger: GCTGTTCCAGCAAGAGCAGCAGTCTGCAGACAAGCC...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACTCCCTCTCACCGTCGTaGTGCAGCGGGAAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHSLSPS*CSGKPG
Trigger: GCCCGGCTTCCCGCTGCAGCACGACGGTGAGAGGGA...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCCCGAGAGCCTTGTCCTaGGACGCGAACCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCPRALS*DANPGQ
Trigger: CTGCCCGGGGTTCGCGTCGCAGGACAAGGCTCTCGG...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGCCGAGAGCCTTGTCCTaGGACGCGAACCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQPRALS*DANPGQ
Trigger: CTGCCCGGGGTTCGCGTCGCAGGACAAGGCTCTCGG...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTTTTAAAAAGGGTCTCTaGCCGGCCGGGGCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCFKKGL*PAGASR
Trigger: CCTAGACGCCCCGGCCGGGCAGAGACCCTTTTTAAA...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCTTTAAAAAGGGTCTCTaGCCGGCCGGGGCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLFKKGL*PAGASR
Trigger: CCTAGACGCCCCGGCCGGGCAGAGACCCTTTTTAAA...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGGTGTGTAGCGTGTCGGGCAGTGTGGCTATaGAATCAGACTGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: QECVAFEVRMCSCGCVACRAVWL*NQTGMK
Trigger: CTTCATCCCAGTCTGATTGCATAGCCACACTGCCCG...ACACGCTACACACCCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATTCAGAACAACTCATGTaGAGACAGGGGTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: LTYRGAYEAGVCGLRSSNSEQLM*RQGWMW
Trigger: CCACATCCACCCCTGTCTGCACATGAGTTGTTCTGA...ATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACGGTAAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATATCAGAACAACTCATGTaGAGACAGGGGTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: DVACRAVWLCNQTGMKRISEQLM*RQGWMW
Trigger: CCACATCCACCCCTGTCTGCACATGAGTTGTTCTGA...TATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp AAGACCTCAGAGAAAAGAGCCCTTTCCATTCGAGCAGCTACAGAGGGCGGTGTTCCTATTGCTAACCGCTaGGTCTGTGCTCCTAACTCC +
Preference number: 4 (lower is better)
Translates to: KTSEKRALSIRAATEGGVPIANR*VCAPNS
Trigger: GGAGTTAGGAGCACAGACGCAGCGGTTAGCAATAGG...AACACCGCCCTCTGTAGCTGCTCGAATGGAAAGGGCTCTTTTCTCTGAGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp ACCATGGAAGTGTGTGAGATTTCACGCACACGCATTCATGTCAACAAGGACATCGGCCTGTGCTGCATGTaGCGCAGAGAACTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TMEVCEISRTRIHVNKDIGLCCM*RRELRL
Trigger: CAGCCTCAGTTCTCTGCGGCACATGCAGCACAGGCC...GATGTCCTTGTTGACATGAATGCGTGTGCGTGAAATCTCACACACTTCCATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GTCACGTGGAGCTGGCCAGAGCTCTTCACAAGCAACACCAAGAACCTCTACCAGTACAACCAAAAACCCTaGCAGACGAAACCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: VTWSWPELFTSNTKNLYQYNQKP*QTKPLG
Trigger: ACCCAGAGGTTTCGTCTGCCAGGGTTTTTGGTTGTA...CTGGTAGAGGTTCTTGGTGTTGCTTGTGAAGAGCTCTGGCCAGCTCCACGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGGCGGGGCAGGACGTaGGCTCACCAGAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: GQCGKTEAYTALLSEQLMWRGRT*AHQNPP
Trigger: TGGAGGATTCTGGTGAGCCCACGTCCTGCCCCGCCA...CATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAATGGCGGGGCAGGACGTaGGCTCACCAGAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQWRGRT*AHQNPP
Trigger: TGGAGGATTCTGGTGAGCCCACGTCCTGCCCCGCCA...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCCTACCCTTTATCCCTTaGTCTTCGCTAGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: YSAVVRTTHVQTGVDVACLPFIP*SSLDFC
Trigger: GCAGAAGTCTAGCGAAGACCAAGGGATAAAGGGTAG...GCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp ACCCTACAACCGTGCTCACCTGACAGCTCCAAGTTTGGAGATGAGCAGGGAGAGCTACCCTTTATCCCTTaGTCTTCGCTAGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: TLQPCSPDSSKFGDEQGELPFIP*SSLDFC
Trigger: GCAGAAGTCTAGCGAAGACCAAGGGATAAAGGGTAG...CTCTCCCTGCTCATCTCCAAACTTGGAGCTGTCAGGTGAGCACGGTTGTAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GCGTCCTGCGGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTAAGACTGGGCTTCTCTaGCTTCATCTTCATCTTTTC +
Preference number: 4 (lower is better)
Translates to: ASCGQDSVLGVNSLTVGPKTGLL*LHLHLF
Trigger: GAAAAGATGAAGATGAAGCCAGAGAAGCCCAGTCTT...AGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACCGCAGGACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAAGACTGGGCTTCTCTaGCTTCATCTTCATCTTTTC +
Preference number: 4 (lower is better)
Translates to: GGCGVPGSVAMQSDWDEEKTGLL*LHLHLF
Trigger: GAAAAGATGAAGATGAAGCCAGAGAAGCCCAGTCTT...CTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACGCATTTCGGAAGACTaGGCTTCTCTGGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGRISED*ASLASS
Trigger: AGATGAAGCCAGAGAAGCCCAGTCTTCCGAAATGCG...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp ATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCGCATTTCGGAAGACTaGGCTTCTCTGGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: IQRCCQNNSCADRGGCGVRISED*ASLASS
Trigger: AGATGAAGCCAGAGAAGCCCAGTCTTCCGAAATGCG...CACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CAAGAAAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCCGCATTTCGGAAGACTaGGCTTCTCTGGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: QESQSHVEYQVQGTRPAVRISED*ASLASS
Trigger: AGATGAAGCCAGAGAAGCCCAGTCTTCCGAAATGCG...GACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTTTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCGGCTGGCGAGGCCATTaGAACAGAAGGTACCACTGG +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLGWRGH*NRRYHW
Trigger: CCAGTGGTACCTTCTGTTCCAATGGCCTCGCCAGCC...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAATCTGCGGAGGGAACCTaGCCTGTGCAAATTTTACAG +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGESAEGT*PVQILQ
Trigger: CTGTAAAATTTGCACAGGCCAGGTTCCCTCCGCAGA...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCTGCTTGGAGCGGTCCTaGGGTCCCGGCCGGACACTG +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCCLERS*GPGRTL
Trigger: CAGTGTCCGGCCGGGACCCCAGGACCGCTCCAAGCA...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCTCGGCACATCCTGTCTaGCTTCCACCATGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLSAHPV*LPPCGC
Trigger: GCACCCACATGGTGGAAGCCAGACAGGATGTGCCGA...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGAGTCTGCAGAGCAGAGTaGATACTTGGAGGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGVCRAE*ILGGLL
Trigger: AAGAAGCCCTCCAAGTATCCACTCTGCTCTGCAGAC...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACAGGAACAGCTCTGCCTTaGGCAAGGACGACTTTGGTG +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTGTALP*ARTTLV
Trigger: CACCAAAGTCGTCCTTGCCCAAGGCAGAGCTGTTCC...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGCACGTGCCGAGAGCCTaGAGAGAGGCTCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQHVPRA*REAPPP
Trigger: GGGAGGGGGAGCCTCTCTCCAGGCTCTCGGCACGTG...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTCTTGGGTCCTCATACTaGGCTGAGCCGAGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCLGSSY*AEPRAL
Trigger: CAAGGCTCTCGGCTCAGCCCAGTATGAGGACCCAAG...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGATTGCGTTCTTCAAATTaGGATGGTGCCACTCCTCGT +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRLRSSN*DGATPR
Trigger: ACGAGGAGTGGCACCATCCCAATTTGAAGAACGCAA...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp ATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGTACCTGCTCCAACACTaGAAGCTTGGACACTTTTCC +
Preference number: 4 (lower is better)
Translates to: IQRCCQNNSCADRGGCGVYLLQH*KLGHFS
Trigger: GGAAAAGTGTCCAAGCTTTCAGTGTTGGAGCAGGTA...CACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp TCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGAACCCCATGTTTTCCTaGACTCTTTGCTGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: SLTVGPMKQECVAFEVRMNPMFS*TLCWWV
Trigger: AACCCACCAGCAAAGAGTTCAGGAAAACATGGGGTT...CATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACGGTAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACTGCGAAGGCGATTCTaGAGCTCTTTCAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: AGRGQCGKTEAYTALLSELRRRF*SSFKVR
Trigger: CCTGACCTTGAAAGAGCTTCAGAATCGCCTTCGCAG...TTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATACAGGCTGGAAGATCTTaGGTTTCTTCTTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: DVACRAVWLCNQTGMKRIQAGRS*VSSCHL
Trigger: CAAGTGGCAAGAAGAAACTCAAGATCTTCCAGCCTG...TATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp CGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGCAGGCTGGAAGATCTTaGGTTTCTTCTTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: RGAYEAGVCGLRSSNVFMQAGRS*VSSCHL
Trigger: CAAGTGGCAAGAAGAAACTCAAGATCTTCCAGCCTG...CATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp CATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTTCGCTGCGGCGTGTTTaGGGATACAGTCATTACTGC +
Preference number: 4 (lower is better)
Translates to: HVLAVDNVEKLKRIQRCCSLRRV*GYSHYC
Trigger: GCAGTAATGACTGTATCCTCAAACACGCCGCAGCGA...ACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp ATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTTGGATTTATACAACAGTaGCGGCGAGGGAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: MDESVTLFCVNLYPQQDLGFIQQ*RRGSSS
Trigger: ACTGCTGCTCCCTCGCCGTCACTGTTGTATAAATCC...AAGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp GTCACGTGGAGCTGGCCAGAGCTCTTCACAAGCAACACCAAGAACCTCTACCAGATTTTGCCGAATTTGTaGATTTGGCTGCGATGGTGC +
Preference number: 4 (lower is better)
Translates to: VTWSWPELFTSNTKNLYQILPNL*IWLRWC
Trigger: GCACCATCGCAGCCAAATTCACAAATTCGGCAAAAT...CTGGTAGAGGTTCTTGGTGTTGCTTGTGAAGAGCTCTGGCCAGCTCCACGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTCTCTTGCTGTTCCTCTaGATCCGACACTGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCLLLFL*IRHWRR
Trigger: TCTCCGCCAGTGTCGGATTCAGAGGAACAGCAAGAG...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTCTTTCAACATGCTGCTaGAGACGTCGAGAAGCGGCG +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCLSTCC*RRREAA
Trigger: CGCCGCTTCTCGACGTCTTCAGCAGCATGTTGAAAG...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACCGAACCCCGGGCAGGTaGAAGGGTCCCTCTCACCGT +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHRTPGR*KGPSHR
Trigger: ACGGTGAGAGGGACCCTTTCACCTGCCCGGGGTTCG...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACACGGATGAGATGTCAGTaGAGGTATGGCTCTAGGGTC +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTRMRCQ*RYGSRV
Trigger: GACCCTAGAGCCATACCTTCACTGACATCTCATCCG...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAGAGACTGTTTCACAGTaGACAGCTTCCTGTCTCATT +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRETVSQ*TASCLI
Trigger: AATGAGACAGGAAGCTGTTCACTGTGAAACAGTCTC...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGTTGCACCACAGAATCTaGGGTTTCAAAGATCTGTTT +
Preference number: 4 (lower is better)
Translates to: CQNNSCADRGGCGVPGSVLHHRI*GFKDLF
Trigger: AAACAGATCTTTGAAACCTCAGATTCTGTGGTGCAA...CACACTGCCCGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp TTCACGCACACGCATTCATGTCAACAAGGACATCAGGAGAAGTTAACATTATACGCACTTCTGGGGGCGTaGCTCCAAGCTGCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: FTHTHSCQQGHQEKLTLYALLGA*LQAAQH
Trigger: GTGCTGCGCAGCTTGGAGTCACGCCCCCAGAAGTGC...GTATAATGTTAACTTCTCCTGATGTCCTTGTTGACATGAATGCGTGTGCGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp ACCATGGAAGTGTGTGAGATTTCACGCACACGCATTCATGTCAACAAGGACATCGACTTAAGTTTCCCCTaGGGGCACAGCTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: TMEVCEISRTRIHVNKDIDLSFP*GHSWAP
Trigger: AGGTGCCCAGCTGTGCCCTCAGGGGAAACTTAAGTC...GATGTCCTTGTTGACATGAATGCGTGTGCGTGAAATCTCACACACTTCCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTTTTGATGGCCTTAGGTaGCTCCTCATTGCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: HVLAVDNVEKLKRIQRCCFDGLR*LLIARV
Trigger: GACCCGAGCAATGAGGAGGCACCTAAGGCCATCAAA...ACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACATTTGATGGCCTTAGGTaGCTCCTCATTGCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTFDGLR*LLIARV
Trigger: GACCCGAGCAATGAGGAGGCACCTAAGGCCATCAAA...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGTCTCATCCTGCACTTaGAGAATGGTGCAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: VGPMKQECVAFEVRMCSCVSSCT*RMVQFG
Trigger: CCCAAACTGCACCATTCTGCAAGTGCAGGATGAGAC...ACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTGTCTCATCCTGCACTTaGAGAATGGTGCAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: HGRVSHSFLRESLPPTGPVSSCT*RMVQFG
Trigger: CCCAAACTGCACCATTCTGCAAGTGCAGGATGAGAC...AGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp GGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGTACTTGTACAATCGGTaGCATCAGCATCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GAYEAGVCGLRSSNVFMWYLYNR*HQHLQV
Trigger: GACCTGGAGATGCTGATGGCACCGATTGTACAAGTA...CCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATATACTTGTACAATCGGTaGCATCAGCATCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: DVACRAVWLCNQTGMKRIYLYNR*HQHLQV
Trigger: GACCTGGAGATGCTGATGGCACCGATTGTACAAGTA...TATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGGATACAGTCATTACTaGAGTACACCGAGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: SGQCSRCELTYRGAYEAGGYSHY*STPSRA
Trigger: AGCCCGACTCGGTGTACTGCAGTAATGACTGTATCC...TCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GTGATGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACACGCAGGGACCACCACTaGCTTCTTCACTGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: VMLSCAGRGQCGKTEAYTRRDHH*LLHCGL
Trigger: GAGACCACAGTGAAGAAGGCAGTGGTGGTCCCTGCG...TGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGAGCTGCCGTGGAGGCTaGCGCTGCTGTTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQSCRGG*RCCCGC
Trigger: GCAGCCACAACAGCAGCGGCAGCCTCCACGGCAGCT...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACAAGAGTCTGCAGGATGTaGTCCAGCGGTGATGCTGTT +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTRVCRM*SSGDAV
Trigger: AACAGCATCACCGCTGGAGCACATCCTGCAGACTCT...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGCTCCTGGGGGAGACCTaGGGTGGACCCGGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRLLGET*GGPGRL
Trigger: GAGCCTCCCGGGTCCACCGCAGGTCTCCCCCAGGAG...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTTCTAGCATCTTCTGTTaGTCCACCAGGGAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCSSIFC*STREGV
Trigger: GACGCCCTCCCTGGTGGAGCAACAGAAGATGCTAGA...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGATCCAGCTGTCTCTTCTaGTCCTCGATCTGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGSSCLF*SSICLF
Trigger: GAACAAACAGATCGAGGAGCAGAAGAGACAGCTGGA...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGCCAGGCGCCTCGCCTaGCGGGGGTCCCTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRARRLA*RGSLWF
Trigger: AAACCACAGGGACCCCCGGCAGGCGAGGCGCCTGGC...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTACCAAACTGCAGGGGTaGAGGCGCCCTTTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCTKLQG*RRPLVC
Trigger: ACAAACCAAAGGGCGCCTGCACCCCTGCAGTTTGGT...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGAGCTTAACACAAAGCTaGAACTCCCAGTCCTGGACA +
Preference number: 4 (lower is better)
Translates to: GQDSVLGVNSLTVGPMKQSLTQS*NSQSWT
Trigger: TGTCCAGGACTGGGAGTTGCAGCTTTGTGTTAAGCT...CTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATAAGCTTAACACAAAGCTaGAACTCCCAGTCCTGGACA +
Preference number: 4 (lower is better)
Translates to: DVACRAVWLCNQTGMKRISLTQS*NSQSWT
Trigger: TGTCCAGGACTGGGAGTTGCAGCTTTGTGTTAAGCT...TATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACCTGGACATGGGCTCTaGTTCCCGCTGATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: CGKTEAYTALLSEQLMCRPGHGL*FPLMVQ
Trigger: CTGCACCATCAGCGGGAAGCAGAGCCCATGTCCAGG...TCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCCGGGCAGTGTGGCTATaGAATCAGACTGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: CFHVLAVDNVEKLKRIQRRAVWL*NQTGMK
Trigger: CTTCATCCCAGTCTGATTGCATAGCCACACTGCCCG...GCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp ACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCAGGACAGTGTTCTATCAGAACAACTCATGTaGAGACAGGGGTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: TCRIPSPRHASCGQDSVLSEQLM*RQGWMW
Trigger: CCACATCCACCCCTGTCTGCACATGAGTTGTTCTGA...TAGAACACTGTCCTGACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp ACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCAGGACAGTGTTCTAAGTGATGCTTTCATGTaGTGGCCGTGGACAATGTGG +
Preference number: 4 (lower is better)
Translates to: TCRIPSPRHASCGQDSVLSDAFM*WPWTMW
Trigger: CCACATTGTCCACGGCCAGCACATGAAAGCATCACT...TAGAACACTGTCCTGACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp AGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGAGTGATGCTTTCATGTaGTGGCCGTGGACAATGTGG +
Preference number: 4 (lower is better)
Translates to: SVLGVNSLTVGPMKQECVSDAFM*WPWTMW
Trigger: CCACATTGTCCACGGCCAGCACATGAAAGCATCACT...CACACACTCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp ATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTTGGGGAGAACAGACTGTaGACCCATGTTTATGGACCG +
Preference number: 4 (lower is better)
Translates to: MDESVTLFCVNLYPQQDLGENRL*THVYGP
Trigger: CGGTCCATAAACATGGGTGCACAGTCTGTTCTCCCC...AAGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp ATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGTACAACCAAAAACCCTaGCAGACGAAACCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: IQRCCQNNSCADRGGCGVYNQKP*QTKPLG
Trigger: ACCCAGAGGTTTCGTCTGCCAGGGTTTTTGGTTGTA...CACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTACAACCAAAAACCCTaGCAGACGAAACCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: RGAYEAGVCGLRSSNVFMYNQKP*QTKPLG
Trigger: ACCCAGAGGTTTCGTCTGCCAGGGTTTTTGGTTGTA...CATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GTGATGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAACTGGGGGCCGCTTCTaGTCTCAGAAGCGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: VMLSCAGRGQCGKTEAYTTGGRF*SQKRFP
Trigger: TGGAAAGCGCTTCTGAGACCAGAAGCGGCCCCCAGT...TGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp TGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGAGCTGTGGAAGCAGACTaGGGGCCGCTTCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: CGKTEAYTALLSEQLMCRAVEAD*GPLLVS
Trigger: TGAGACCAGAAGCGGCCCCCAGTCTGCTTCCACAGC...TCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAAGTTCCTTCACAGCTGTaGAAGCAGACTGGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQVPSQL*KQTGGR
Trigger: GCGGCCCCCAGTCTGCTTCCACAGCTGTGAAGGAAC...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTTCGGAGGTGTCATCGTaGTCATCCCCTCCTTTCACC +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCSEVSS*SSPPFT
Trigger: GGTGAAAGGAGGGGATGACCACGATGACACCTCCGA...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTTGCAATACAGGGCGTTaGGGTCGTAACCCTCACATT +
Preference number: 4 (lower is better)
Translates to: DSVLGVNSLTVGPMKQECCNTGR*GRNPHI
Trigger: AATGTGAGGGTTACGACCCCAACGCCCTGTATTGCA...ACACTCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGCAGAATGGTGCAGTTTaGGCAGATATAGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GQDSVLGVNSLTVGPMKQQNGAV*ADIVFP
Trigger: GGGGAAGACTATATCTGCCCAAACTGCACCATTCTG...CTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATCAGAATGGTGCAGTTTaGGCAGATATAGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LTYRGAYEAGVCGLRSSNQNGAV*ADIVFP
Trigger: GGGGAAGACTATATCTGCCCAAACTGCACCATTCTG...ATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACGGTAAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp ATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCCTGCACTTGCAGAATaGTGCAGTTTGGGCAGATAT +
Preference number: 4 (lower is better)
Translates to: IQRCCQNNSCADRGGCGVPALAE*CSLGRY
Trigger: ATATCTGCCCAAACTGCACCATTCTGCAAGTGCAGG...CACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGCTACCCTTTATCCCTTaGTCTTCGCTAGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: GAYEAGVCGLRSSNVFMWLPFIP*SSLDFC
Trigger: GCAGAAGTCTAGCGAAGACCAAGGGATAAAGGGTAG...CCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAGCCTCTATCACAGGCTaGAAGATCTTGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRASITG*KILSFF
Trigger: GAAGAAACTCAAGATCTTCCAGCCTGTGATAGAGGC...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CTGACCAGTGGGTCTTCACAGGTGCGGAGAGGCCAGCTTCTCGGTCTTCACCTCAGATACAAGTTCTTCTaGCTTCAGTCTCACAAGTTT +
Preference number: 4 (lower is better)
Translates to: LTSGSSQVRRGQLLGLHLRYKFF*LQSHKF
Trigger: AAACTTGTGAGACTGAAGCCAGAAGAACTTGTATCT...GAGGTGAAGACCGAGAAGCTGGCCTCTCCGCACCTGTGAAGACCCACTGGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGGGATGGCCATCTCCTaGAGGCCCAGGGAAATACGT +
Preference number: 4 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKGMAIS*RPREIR
Trigger: ACGTATTTCCCTGGGCCTCCAGGAGATGGCCATCCC...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGGGCAAGAGTTTGGATaGAACAGGGTCCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKGQEFG*NRVLGA
Trigger: AGCGCCCAGGACCCTGTTCCATCCAAACTCTTGCCC...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCGGGCAAGGACGACTTTaGTGGTGGAGACATCAAGGC +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLGQGRL*WWRHQG
Trigger: GCCTTGATGTCTCCACCACCAAAGTCGTCCTTGCCC...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGTCGGGCAGGGCACCCTaGGCACCACGTGCCGAGAGC +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRSGRAP*APRAES
Trigger: GCTCTCGGCACGTGGTGCCCAGGGTGCCCTGCCCGA...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTGCCGGGTCTGGCCTGTaGCTCTCTGTCCCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVAGSGL*LSVPLC
Trigger: ACAGAGGGGGACAGAGAGCCACAGGCCAGACCCGGC...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCTGGAAACGGAGGGGCTaGCCCCCTTGGTCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCWKRRG*PPWSRE
Trigger: TTCCCGGGACCAAGGGGGCCAGCCCCTCCGTTTCCA...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCTCTGGGCTCCGAATCTaGCTGGCGGAGGCCCTCGTG +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCSGLRI*LAEALV
Trigger: CACGAGGGCCTCCGCCAGCCAGATTCGGAGCCCAGA...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACATCCCTCTTCTCCCCATaGGGATCCTTGCGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTSLFSP*GSLRSS
Trigger: TGAAGAACGCAAGGATCCCCATGGGGAGAAGAGGGA...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCTTATACGGGGCGTCCTaGAACTCCCTCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLLYGAS*NSLFSP
Trigger: TGGGGAGAAGAGGGAGTTCCAGGACGCCCCGTATAA...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTCTCTGGCCTCCGAACTaGAAAGGCGCGCCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVLWPPN*KGAPPL
Trigger: CAGAGGCGGCGCGCCTTTCCAGTTCGGAGGCCAGAG...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTGCTCTCGGTCGCGGTTaGCGCTCCTCTCCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVALGRG*RSSPGF
Trigger: GAAACCGGGAGAGGAGCGCCAACCGCGACCGAGAGC...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATAGATGCTTTCATGTGCTaGCCGTGGACAATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: DVACRAVWLCNQTGMKRIDAFMC*PWTMWK
Trigger: TTTCCACATTGTCCACGGCCAGCACATGAAAGCATC...TATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGATGCTTTCATGTGCTaGCCGTGGACAATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: GQDSVLGVNSLTVGPMKQDAFMC*PWTMWK
Trigger: TTTCCACATTGTCCACGGCCAGCACATGAAAGCATC...CTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp AGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTACACCTGCAATTGTGTaGTATAAACTGAGGCACATG +
Preference number: 4 (lower is better)
Translates to: SSYRGRCFLLPCTWGEQTTPAIV*YKLRHM
Trigger: CATGTGCCTCAGTTTATACCACACAATTGCAGGTGT...AGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGAGGGCCGACGCCTTTTaGCTCTGGCGCCAACCCGTA +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQRADAF*LWRQPV
Trigger: TACGGGTTGGCGCCAGAGTCAAAAGGCGTCGGCCCT...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266070.8
CDS-3UTR TCA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTTGGGACACAACCCCCTaGTCGTTCTCGGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVWDTTP*SFSGSC
Trigger: GCAGGAGCCCGAGAACGATCAGGGGGTTGTGTCCCA...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGGTGTGTTCATCTTTGATGTCCTaGGCCGCCTTTCCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: YEAGVCGLRSSNVFMWVCSSLMS*AAFPSN
Trigger: GTTGGAGGGAAAGGCGGCTCAGGACATCAAAGATGA...ACACACCCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTTCATCTTTGATGTCCTaGGCCGCCTTTCCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCSSLMS*AAFPSN
Trigger: GTTGGAGGGAAAGGCGGCTCAGGACATCAAAGATGA...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GTGATGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACACAGGCTCCTCATCTTTaGTGTCCTGAGCCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: VMLSCAGRGQCGKTEAYTQAPHL*CPEPPF
Trigger: GAAAGGCGGCTCAGGACATCAAAGATGAGGAGCCTG...TGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp ACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCAGGACAGTGTTCTAATAAACCTGTTGTTGTaGGGCTGGCGGCAAATGCAA +
Preference number: 4 (lower is better)
Translates to: TCRIPSPRHASCGQDSVLINLLL*GWRQMQ
Trigger: TTGCATTTGCCGCCAGCCTCACAACAACAGGTTTAT...TAGAACACTGTCCTGACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp TATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTCAGGCTGGAAGATCTTaGGTTTCTTCTTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: YTALLSEQLMCRQGWMWRQAGRS*VSSCHL
Trigger: CAAGTGGCAAGAAGAAACTCAAGATCTTCCAGCCTG...ACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGGGGCCAATACATTTTaGGGCACCAGGCGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKGANTF*GTRRLY
Trigger: ATAGAGGCGCCTGGTGCCTCAAAATGTATTGGCCCC...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATACGAATACTTACCAGGGGGCCAATACATTTTaGGGCACCAGGCGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: GSVAMQSDWDEENTNTYQGANTF*GTRRLY
Trigger: ATAGAGGCGCCTGGTGCCTCAAAATGTATTGGCCCC...CTGGTAAGTATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTGGATTTATACAACAGTaGCGGCGAGGGAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCGFIQQ*RRGSSS
Trigger: ACTGCTGCTCCCTCGCCGTCACTGTTGTATAAATCC...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp CAAGGACAAATGTCCTCAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTGCAAATTTTACAGTTaGGATCGAAGAGGTGTGCGC +
Preference number: 4 (lower is better)
Translates to: QGQMSSGRSSYCCELHGSCKFYS*DRRGVR
Trigger: GCGCACACCTCTTCGATCTCAACTGTAAAATTTGCA...GGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTGAGGACATTTGTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CCAGACAGCACCTGCCTTTATGACGAAGCACTTCAGAGGACACTGTGTGATCCAATCCTCCCACCAATGTaGATTGTGTCAGGCAAATCC +
Preference number: 4 (lower is better)
Translates to: PDSTCLYDEALQRTLCDPILPPM*IVSGKS
Trigger: GGATTTGCCTGACACAATTCACATTGGTGGGAGGAT...TGGATCACACAGTGTCCTCTGAAGTGCTTCGTCATAAAGGCAGGTGCTGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCTATATTCGGACGTGGTaGCTCAAGACCTGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLYIRTW*LKTWSL
Trigger: GAGGGACCAGGTCTTGAGTCACCACGTCCGAATATA...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTGATGTGCTCCAGCGGTaGTGCTGTTTTGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCDVLQR*CCFGSR
Trigger: TCTGCTTCCAAAACAGCATCACCGCTGGAGCACATC...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGGGGGCCGTGAAGCCCTaGCATCCCCAAAGCATGAGG +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQGAVKP*HPQSMR
Trigger: CCTCATGCTTTGGGGATGTCAGGGCTTCACGGCCCC...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAAGGGAAATTGGGGCCGTaGAGCCCTGACATCCCCAAA +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQGKLGP*SPDIPK
Trigger: TTTGGGGATGTCAGGGCTTCACGGCCCCAATTTCCC...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCACCAAGGTAAGAGGGTaGGGGGCCTCTGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCTKVRG*GASAVP
Trigger: GGGGACAGCAGAGGCCCCTCACCCTCTTACCTTGGT...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGAGGAAACACAAACGGATaGGATGTCAGTGAAGGTATG +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGGNTNG*DVSEGM
Trigger: CATACCTTCACTGACATCTCATCCGTTTGTGTTTCC...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGAGAGACTGTTTCACAGTaGACAGCTTCCTGTCTCATT +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGETVSQ*TASCLI
Trigger: AATGAGACAGGAAGCTGTTCACTGTGAAACAGTCTC...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAAACATTTATACAACAGTaGCGGCGAGGGAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: AGRGQCGKTEAYTALLSETFIQQ*RRGSSS
Trigger: ACTGCTGCTCCCTCGCCGTCACTGTTGTATAAATGT...TTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp CATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTACATTTATACAACAGTaGCGGCGAGGGAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: HVLAVDNVEKLKRIQRCCTFIQQ*RRGSSS
Trigger: ACTGCTGCTCCCTCGCCGTCACTGTTGTATAAATGT...ACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp TCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGGTGAACGTTCACCAGTaGGGTTTACAGCTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: SLTVGPMKQECVAFEVRMVNVHQ*GLQLWK
Trigger: TTTCCAAAGCTGTAAACCTCACTGGTGAACGTTCAC...CATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACGGTAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTCCGCAGCAGCCATCTTaGCAGAGGGCCGACGCCTTT +
Preference number: 4 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVPQQPS*QRADAF
Trigger: AAAGGCGTCGGCCCTCTGGCAAGATGGCTGCTGCGG...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266070.8
CDS-3UTR GCA 90 bp CAAGAAAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCTTTGTCGTCCATACCTaGTCCAACACTGAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: QESQSHVEYQVQGTRPAVFVVHT*SNTESL
Trigger: CAAGCTTTCAGTGTTGGAGCAGGTATGGACGACAAA...GACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCTTTGATGGCCTTAGGTaGCTCCTCATTGCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLFDGLR*LLIARV
Trigger: GACCCGAGCAATGAGGAGGCACCTAAGGCCATCAAA...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp AATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGCAATGGTCAGGAACTaGTCCACGCGCTCAGTGCGC +
Preference number: 4 (lower is better)
Translates to: NVEKLKRIQRCCQNNSCAAMVRN*STRSVR
Trigger: GCGCACTGAGCGCGTGGAGCAGTTCCTGACCATTGC...TGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCTCGTTCTCGGGCTCCTaGTTACTGGGCAGGACGCCC +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCSFSGS*LLGRTP
Trigger: GGGCGTCCTGCCCAGTAAGCAGGAGCCCGAGAACGA...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGGCACTTGCAGAATGGTaGAGTTTGGGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: SLTVGPMKQECVAFEVRMALAEW*SLGRYS
Trigger: ACTATATCTGCCCAAACTGCACCATTCTGCAAGTGC...CATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACGGTAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CCAGACAGCACCTGCCTTTATGACGAAGCACTTCAGAGGACACTGTGTGATCCATACTTGTACAATCGGTaGCATCAGCATCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PDSTCLYDEALQRTLCDPYLYNR*HQHLQV
Trigger: GACCTGGAGATGCTGATGGCACCGATTGTACAAGTA...TGGATCACACAGTGTCCTCTGAAGTGCTTCGTCATAAAGGCAGGTGCTGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CAAGAAAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCAAACTTCATTGTCGCTaGGGCGTGTTTGAGGATACA +
Preference number: 4 (lower is better)
Translates to: QESQSHVEYQVQGTRPAVKLHCR*GVFEDT
Trigger: TGTATCCTCAAACACGCCGCAGCGACAATGAAGTTT...GACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTGGGCGGGATGCTaGGGAGGCCACGGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRVWAGC*GGHGCA
Trigger: TGCACAGCCGTGGCCTCCGCAGCATCCCGCCCAGAC...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCCTCTTCCCGCTCGGCTaGAGCTGCTTCAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCLFPLG*SCFRSP
Trigger: AGGGCTCCTGAAGCAGCTGCAGCCGAGCGGGAAGAG...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGCCGACGGCGGCCCTCTaGTGCCTGAGAGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQPTAAL*CLRASS
Trigger: AGAAGAAGCTCTCAGGCAGCAGAGGGCCGCCGTCGG...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGCCCGGCTTCATCACCTaGGGGGCCTGGCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRPGFIT*GAWPWK
Trigger: CTTCCAGGGCCAGGCCCCGCAGGTGATGAAGCCGGG...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCACCAAGGCACGCGTCCTaGGGTCAGGACAGTGTTCTA +
Preference number: 4 (lower is better)
Translates to: VDNVEKLKRIQRCCQNNSPRHAS*GQDSVL
Trigger: TAGAACACTGTCCTGACCGCAGGACGCGTGCCTTGG...TGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp ATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTTGGTCCAGACAGCACCTaGCTTTATGACGAAGCACTT +
Preference number: 4 (lower is better)
Translates to: MDESVTLFCVNLYPQQDLGPDST*LYDEAL
Trigger: AAGTGCTTCGTCATAAAGGCAGGTGCTGTCTGGACC...AAGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGGGCAGACGAAACCTCTaGGTCCAAGCAGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: GQCGKTEAYTALLSEQLMGRRNL*VQADSQ
Trigger: CTGGCTGTCTGCTTGGACCCAGAGGTTTCGTCTGCC...CATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp TGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGAGGCAGACGAAACCTCTaGGTCCAAGCAGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: CGKTEAYTALLSEQLMCRGRRNL*VQADSQ
Trigger: CTGGCTGTCTGCTTGGACCCAGAGGTTTCGTCTGCC...TCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGCGCGGCGCCGCGCAATaGTCAGGAACTGCTCCACGC +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRRGAAQ*SGTAPR
Trigger: GCGTGGAGCAGTTCCTGACCATTGCGCGGCGCCGCG...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp AATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGCTGTGGAAGCAGACTaGGGGCCGCTTCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: NVEKLKRIQRCCQNNSCAAVEAD*GPLLVS
Trigger: TGAGACCAGAAGCGGCCCCCAGTCTGCTTCCACAGC...TGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GTGATGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACATCGGAGGTGTCATCGTaGTCATCCCCTCCTTTCACC +
Preference number: 4 (lower is better)
Translates to: VMLSCAGRGQCGKTEAYTSEVSS*SSPPFT
Trigger: GGTGAAAGGAGGGGATGACCACGATGACACCTCCGA...TGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGTCAGGGGCCTCTCAGTaGGCTCCTGTTCCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQSGASQ*APVPAS
Trigger: GGAAGCGGGAACAGGAGCCCACTGAGAGGCCCCTGA...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTTGCAATACAGGGCGTTaGGGTCGTAACCCTCACATT +
Preference number: 4 (lower is better)
Translates to: HVLAVDNVEKLKRIQRCCCNTGR*GRNPHI
Trigger: AATGTGAGGGTTACGACCCCAACGCCCTGTATTGCA...ACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAATGCAATACAGGGCGTTaGGGTCGTAACCCTCACATT +
Preference number: 4 (lower is better)
Translates to: AGRGQCGKTEAYTALLSECNTGR*GRNPHI
Trigger: AATGTGAGGGTTACGACCCCAACGCCCTGTATTGCA...TTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTCCTGCACTTGCAGAATaGTGCAGTTTGGGCAGATAT +
Preference number: 4 (lower is better)
Translates to: DSVLGVNSLTVGPMKQECPALAE*CSLGRY
Trigger: ATATCTGCCCAAACTGCACCATTCTGCAAGTGCAGG...ACACTCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp AAGACCTCAGAGAAAAGAGCCCTTTCCATTCGAGCAGCTACAGAGGGCGGTGTTCCTGCACTTGCAGAATaGTGCAGTTTGGGCAGATAT +
Preference number: 4 (lower is better)
Translates to: KTSEKRALSIRAATEGGVPALAE*CSLGRY
Trigger: ATATCTGCCCAAACTGCACCATTCTGCAAGTGCAGG...AACACCGCCCTCTGTAGCTGCTCGAATGGAAAGGGCTCTTTTCTCTGAGGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGGCCTCTATCACAGGCTaGAAGATCTTGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: QDSVLGVNSLTVGPMKQEASITG*KILSFF
Trigger: GAAGAAACTCAAGATCTTCCAGCCTGTGATAGAGGC...CTCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAAGGCTGGCGAGGCCATTaGAACAGAAGGTACCACTGG +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQGWRGH*NRRYHW
Trigger: CCAGTGGTACCTTCTGTTCCAATGGCCTCGCCAGCC...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCCATCACAGATCTCGCTaGCCTCTCTTTCCACGTGGA +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLHHRSR*PLFPRG
Trigger: TCCACGTGGAAAGAGAGGCCAGCGAGATCTGTGATG...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACGTGGTTTTGGGCTCCTaGGGGAGACCTGCGGTGGAC +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHVVLGS*GRPAVD
Trigger: GTCCACCGCAGGTCTCCCCCAGGAGCCCAAAACCAC...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGCCCTTTCCACCTCGTaGCGCCGCCCTCGCTCCACA +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRALSTS*RRPRST
Trigger: TGTGGAGCGAGGGCGGCGCCACGAGGTGGAAAGGGC...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGCACTTTCTGTCCTGGTaGGGGGAGCGGGGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRHFLSW*GERGGA
Trigger: GGCACCGCCCCGCTCCCCCCACCAGGACAGAAAGTG...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTTCCCTCTTCTCCCCATaGGGATCCTTGCGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCSLFSP*GSLRSS
Trigger: TGAAGAACGCAAGGATCCCCATGGGGAGAAGAGGGA...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAATTATACGGGGCGTCCTaGAACTCCCTCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKLYGAS*NSLFSP
Trigger: TGGGGAGAAGAGGGAGTTCCAGGACGCCCCGTATAA...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCGAAATGACCAGGGGGTaGTCCTCTCTGACCTCCAAA +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLEMTRG*SSLTSK
Trigger: TTTGGAGGTCAGAGAGGACCACCCCCTGGTCATTTC...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp AAGACCTCAGAGAAAAGAGCCCTTTCCATTCGAGCAGCTACAGAGGGCGGTGTTGCTGGTTGCAGGCTGTaGGTTTTTCCCTCTCTAAAA +
Preference number: 4 (lower is better)
Translates to: KTSEKRALSIRAATEGGVAGCRL*VFPSLK
Trigger: TTTTAGAGAGGGAAAAACCCACAGCCTGCAACCAGC...AACACCGCCCTCTGTAGCTGCTCGAATGGAAAGGGCTCTTTTCTCTGAGGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp TTCACGCACACGCATTCATGTCAACAAGGACATCAGGAGAAGTTAACATTATACCAGCACCCTCAGGTGTaGCCTGTGCTGTCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: FTHTHSCQQGHQEKLTLYQHPQV*PVLSKG
Trigger: GCCCTTGGACAGCACAGGCCACACCTGAGGGTGCTG...GTATAATGTTAACTTCTCCTGATGTCCTTGTTGACATGAATGCGTGTGCGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp ACCATGGAAGTGTGTGAGATTTCACGCACACGCATTCATGTCAACAAGGACATCAGAGAACTGAGGCTGTaGAATGGAGCTGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: TMEVCEISRTRIHVNKDIRELRL*NGAGSC
Trigger: GCAGGACCCAGCTCCATTCCACAGCCTCAGTTCTCT...GATGTCCTTGTTGACATGAATGCGTGTGCGTGAAATCTCACACACTTCCATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp AAGACCTCAGAGAAAAGAGCCCTTTCCATTCGAGCAGCTACAGAGGGCGGTGTTAAAGCTGGAACTGAGTaGGGTGAACATCTAGGTGGA +
Preference number: 4 (lower is better)
Translates to: KTSEKRALSIRAATEGGVKAGTE*GEHLGG
Trigger: TCCACCTAGATGTTCACCCCACTCAGTTCCAGCTTT...AACACCGCCCTCTGTAGCTGCTCGAATGGAAAGGGCTCTTTTCTCTGAGGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTATAAACCTGTTGTTGTaGGGCTGGCGGCAAATGCAA +
Preference number: 4 (lower is better)
Translates to: HVLAVDNVEKLKRIQRCCINLLL*GWRQMQ
Trigger: TTGCATTTGCCGCCAGCCTCACAACAACAGGTTTAT...ACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GTGATGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACACCCACACAATCGCCATaGAACCATTCTTCACAGCGG +
Preference number: 4 (lower is better)
Translates to: VMLSCAGRGQCGKTEAYTPTQSP*NHSSQR
Trigger: CCGCTGTGAAGAATGGTTTCATGGCGATTGTGTGGG...TGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATACGAATACTTACCAGCCCACACAATCGCCATaGAACCATTCTTCACAGCGG +
Preference number: 4 (lower is better)
Translates to: GSVAMQSDWDEENTNTYQPTQSP*NHSSQR
Trigger: CCGCTGTGAAGAATGGTTTCATGGCGATTGTGTGGG...CTGGTAAGTATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGAGGGGCTGTTTTCTTTaGGGCTGCCATGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQRGCFL*GCHGCR
Trigger: GCGGCAGCCATGGCAGCCTCAAAGAAAACAGCCCCT...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACACAGGCAAATCCTCACTaGGGTAATCAAAACACCCAG +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTQANPH*GNQNTQ
Trigger: CTGGGTGTTTTGATTACCTCAGTGAGGATTTGCCTG...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGATGTGCTCCAGCGGTaGTGCTGTTTTGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKDVLQR*CCFGSR
Trigger: TCTGCTTCCAAAACAGCATCACCGCTGGAGCACATC...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGGTCCTCATACTGGGCTaGGCCGAGAGCCTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQVLILG*AESLVL
Trigger: CAGGACAAGGCTCTCGGCTCAGCCCAGTATGAGGAC...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAACGGGCAGTTTCAAACTaGCTAGGATGGGGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQRAVSN*LGWGPL
Trigger: AAGAGGGCCCCATCCTAGTCAGTTTGAAACTGCCCG...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATAAGGCCAACCCCTAGGTaGTACATACATTTATACAAC +
Preference number: 4 (lower is better)
Translates to: DVACRAVWLCNQTGMKRIRPTPR*YIHLYN
Trigger: GTTGTATAAATGTATGTATCACCTAGGGGTTGGCCT...TATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGTGAACGTTCACCAGTaGGGTTTACAGCTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: VGPMKQECVAFEVRMCSCVNVHQ*GLQLWK
Trigger: TTTCCAAAGCTGTAAACCTCACTGGTGAACGTTCAC...ACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp AAGGCACGCGTCCTGCGGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTAATCAATCATTAAGGTaGACGTTCACCAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: KARVLRSGQCSRCELTYRNQSLR*TFTSEV
Trigger: AACCTCACTGGTGAACGTTCACCTTAATGATTGATT...ACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACCGCAGGACGCGTGCCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GTTTCCCCTGAGGGCACAGCTGGGCACCTTCAGGCCTTCACTTGCTTAAGTGTGCTTGCCAAAGATGAATaGACCTATTACAATTTGAGC +
Preference number: 4 (lower is better)
Translates to: VSPEGTAGHLQAFTCLSVLAKDE*TYYNLS
Trigger: GCTCAAATTGTAATAGGTTCATTCATCTTTGGCAAG...CACACTTAAGCAAGTGAAGGCCTGAAGGTGCCCAGCTGTGCCCTCAGGGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp ATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTTCAGAACCCTACACGATaGGCTTTCAACCTGACTCAT +
Preference number: 4 (lower is better)
Translates to: MDESVTLFCVNLYPQQDLQNPTR*AFNLTH
Trigger: ATGAGTCAGGTTGAAAGCTCATCGTGTAGGGTTCTG...AAGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp GTGATGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACATTTGATGGCCTTAGGTaGCTCCTCATTGCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: VMLSCAGRGQCGKTEAYTFDGLR*LLIARV
Trigger: GACCCGAGCAATGAGGAGGCACCTAAGGCCATCAAA...TGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp AATTTGAAATTTGGGGCAGGATATGATCTTAAGAGTCTAAACATTCAAGAGACGGCTCCACGCGCTCAGTaGGCTTGGGCTGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: NLKFGAGYDLKSLNIQETAPRAQ*AWAASH
Trigger: GTGGGAGGCAGCCCAAGCGCACTGAGCGCGTGGAGC...CGTCTCTTGAATGTTTAGACTCTTAAGATCATATCCTGCCCCAAATTTCAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACGCAATGGTCAGGAACTaGTCCACGCGCTCAGTGCGC +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHAMVRN*STRSVR
Trigger: GCGCACTGAGCGCGTGGAGCAGTTCCTGACCATTGC...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCCTCGAGCCTCAGAAATaGCCACACAATCGCCATGAA +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLLEPQK*PHNRHE
Trigger: TTCATGGCGATTGTGTGGGCATTTCTGAGGCTCGAG...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTTACTTGTACAATCGGTaGCATCAGCATCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: HVLAVDNVEKLKRIQRCCYLYNR*HQHLQV
Trigger: GACCTGGAGATGCTGATGGCACCGATTGTACAAGTA...ACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACTTGCCACTTGGATTTaGAGCTTTCTCAATTCTACC +
Preference number: 4 (lower is better)
Translates to: AERTFPGIQKNCSEGETGLATWI*SFLNST
Trigger: GGTAGAATTGAGAAAGCTGCAAATCCAAGTGGCAAG...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CAAGAAAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCCTTGCCACTTGGATTTaGAGCTTTCTCAATTCTACC +
Preference number: 4 (lower is better)
Translates to: QESQSHVEYQVQGTRPAVLATWI*SFLNST
Trigger: GGTAGAATTGAGAAAGCTGCAAATCCAAGTGGCAAG...GACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATACTTGCCACTTGGATTTaGAGCTTTCTCAATTCTACC +
Preference number: 4 (lower is better)
Translates to: DVACRAVWLCNQTGMKRILATWI*SFLNST
Trigger: GGTAGAATTGAGAAAGCTGCAAATCCAAGTGGCAAG...TATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp ACCCAGACGCCTCTGCTCTTTATCGTGGATCAAAGTCCCTGGGGCTTTTGTGTGCTTGCCACTTGGATTTaGAGCTTTCTCAATTCTACC +
Preference number: 4 (lower is better)
Translates to: TQTPLLFIVDQSPWGFCVLATWI*SFLNST
Trigger: GGTAGAATTGAGAAAGCTGCAAATCCAAGTGGCAAG...CACACAAAAGCCCCAGGGACTTTGATCCACGATAAAGAGCAGAGGCGTCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTCCCACGACGGCGTGCTaGTCTCACAAGCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVPTTAC*SHKLLP
Trigger: AGGAAGCAGCTTGTGAGAGCAGCACGCCGTCGTGGG...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACCCCACGACGGCGTGCTaGTCTCACAAGCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHPTTAC*SHKLLP
Trigger: AGGAAGCAGCTTGTGAGAGCAGCACGCCGTCGTGGG...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCTCGCCCACGACGGCGTaGTGCTCTCACAAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCSPTTA*CSHKLL
Trigger: AAGCAGCTTGTGAGAGCAGCACGCCGTCGTGGGCGA...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGCACGTGCTGACTCTTaGTGTTCCTCTGAATCCGAC +
Preference number: 4 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKARADS*CSSESD
Trigger: GTCGGATTCAGAGGAACAGCAAGAGTCAGCACGTGC...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTCGAGAAGCGGCGCTGTaGTCTTCTCAGGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVREAAL*SSQGQH
Trigger: GTGCTGTCCCTGAGAAGAGCACAGCGCCGCTTCTCG...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TTCACGCACACGCATTCATGTCAACAAGGACATCAGGAGAAGTTAACATTATACCGGCTGTGCATGAACTaGTTGGAGCGGTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: FTHTHSCQQGHQEKLTLYRLCMN*LERSWG
Trigger: ACCCCAGGACCGCTCCAAGCAGTTCATGCACAGCCG...GTATAATGTTAACTTCTCCTGATGTCCTTGTTGACATGAATGCGTGTGCGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTCCCCATGGGGATCCTTaGGTTCTTCAAATTGGGATG +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCPHGDP*VLQIGM
Trigger: CATCCCAATTTGAAGAACGCAAGGATCCCCATGGGG...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAAGGCGCGCCGCCTCTaGTTCCCAGAAATGGGGCTT +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHKARRL*FPEMGL
Trigger: AAGCCCCATTTCTGGGAAGCAGAGGCGGCGCGCCTT...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCCGCTCTCTTTGCTCTTaGTCCGGTCCTTGCGGTCGC +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCRSLCS*SGPCGR
Trigger: GCGACCGCAAGGACCGGAGCAAGAGCAAAGAGAGCG...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGCCCGAGCGCTCTCTTTaGTCTTGCTCCGGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQPERSL*SCSGPC
Trigger: GCAAGGACCGGAGCAAGAGCAAAGAGAGCGCTCGGG...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCCCCGAGCGCTCTCTTTaGTCTTGCTCCGGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCPERSL*SCSGPC
Trigger: GCAAGGACCGGAGCAAGAGCAAAGAGAGCGCTCGGG...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GTGATGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACACGGGCAGTGTGGCTATaGAATCAGACTGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: VMLSCAGRGQCGKTEAYTRAVWL*NQTGMK
Trigger: CTTCATCCCAGTCTGATTGCATAGCCACACTGCCCG...TGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGGCTGTGGAAGCAGACTaGGGGCCGCTTCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQAVEAD*GPLLVS
Trigger: TGAGACCAGAAGCGGCCCCCAGTCTGCTTCCACAGC...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAATCGGAGGTGTCATCGTaGTCATCCCCTCCTTTCACC +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQSEVSS*SSPPFT
Trigger: GGTGAAAGGAGGGGATGACCACGATGACACCTCCGA...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTTTCCGCAGGCGACTCTaGATCCCTTTCAGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVFRRRL*IPFRGL
Trigger: GAGGCCCCTGAAAGGGATCCAGAGTCGCCTGCGGAA...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCTGCAATACAGGGCGTTaGGGTCGTAACCCTCACATT +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLCNTGR*GRNPHI
Trigger: AATGTGAGGGTTACGACCCCAACGCCCTGTATTGCA...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCCTGCACTTGCAGAATaGTGCAGTTTGGGCAGATAT +
Preference number: 4 (lower is better)
Translates to: HVLAVDNVEKLKRIQRCCPALAE*CSLGRY
Trigger: ATATCTGCCCAAACTGCACCATTCTGCAAGTGCAGG...ACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp ACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCAGGACAGTGTTCTAGCCTCTATCACAGGCTaGAAGATCTTGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: TCRIPSPRHASCGQDSVLASITG*KILSFF
Trigger: GAAGAAACTCAAGATCTTCCAGCCTGTGATAGAGGC...TAGAACACTGTCCTGACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp ATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGAAGACTGGGCTTCTCTaGCTTCATCTTCATCTTTTC +
Preference number: 4 (lower is better)
Translates to: IQRCCQNNSCADRGGCGVKTGLL*LHLHLF
Trigger: GAAAAGATGAAGATGAAGCCAGAGAAGCCCAGTCTT...CACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCCGCATTTCGGAAGACTaGGCTTCTCTGGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLRISED*ASLASS
Trigger: AGATGAAGCCAGAGAAGCCCAGTCTTCCGAAATGCG...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGAAGGCGTCCTGGGGCTaGCGAGGCCATTGGAACAGA +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQKASWG*RGHWNR
Trigger: TCTGTTCCAATGGCCTCGCCAGCCCCAGGACGCCTT...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTTCTGCGGAGGGAACCTaGCCTGTGCAAATTTTACAG +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCSAEGT*PVQILQ
Trigger: CTGTAAAATTTGCACAGGCCAGGTTCCCTCCGCAGA...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTAAGCAGACGAAGCGGTaGAGGAAGCTGCCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVKQTKR*RKLPWR
Trigger: CCTCCACGGCAGCTTCCTCCACCGCTTCGTCTGCTT...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGAAGCAGACGAAGCGGTaGAGGAAGCTGCCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQKQTKR*RKLPWR
Trigger: CCTCCACGGCAGCTTCCTCCACCGCTTCGTCTGCTT...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGACCCGGGAGGCTCTCTaGCGGACGGGTCGAATGATT +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQTREAL*RTGRMI
Trigger: AATCATTCGACCCGTCCGCCAGAGAGCCTCCCGGGT...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCACCCGGGAGGCTCTCTaGCGGACGGGTCGAATGATT +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCTREAL*RTGRMI
Trigger: AATCATTCGACCCGTCCGCCAGAGAGCCTCCCGGGT...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAACGGCACACATCCTGTTaGGCAGGTCATCAACAGTCA +
Preference number: 4 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKRHTSC*AGHQQS
Trigger: TGACTGTTGATGACCTGCCCAACAGGATGTGTGCCG...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGCCAGGGGGAAGAGGCTaGCTCTTTTTCCTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQPGGRG*LFFLRD
Trigger: GTCCCGGAGGAAAAAGAGCCAGCCTCTTCCCCCTGG...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTTTCTTCAAATTGGGATaGTGCCACTCCTCGTGGTCC +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCFFKLG*CHSSWS
Trigger: GGACCACGAGGAGTGGCACCATCCCAATTTGAAGAA...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACAAATCTTGGTGGTGAATaGACCCTCTGGTCTTCGAAC +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTNLGGE*TLWSSN
Trigger: GTTCGAAGACCAGAGGGTCCATTCACCACCAAGATT...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGACATCGTACTAGATGTTaGAACGTGACACCTACTTTA +
Preference number: 4 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRHRTRC*NVTPTL
Trigger: TAAAGTAGGTGTCACGTTCCAACATCTAGTACGATG...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp AATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGAGGCATCCTGGACATaGGCTCTGCTTCCCGCTGAT +
Preference number: 4 (lower is better)
Translates to: NVEKLKRIQRCCQNNSCAEASWT*ALLPAD
Trigger: ATCAGCGGGAAGCAGAGCCCATGTCCAGGATGCCTC...TGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
3UTR CAA 72 bp GGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTaGTCAGAACAACTCATGTGCAGACAGGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: GQCGKTEAYTAL*SEQLMCRQGWM
Trigger: CATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTAACCCCATGTTTTCCTaGACTCTTTGCTGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCNPMFS*TLCWWV
Trigger: AACCCACCAGCAAAGAGTTCAGGAAAACATGGGGTT...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp CGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATACGAATACTTACCAACCCCATGTTTTCCTaGACTCTTTGCTGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: RAVWLCNQTGMKRIRILTNPMFS*TLCWWV
Trigger: AACCCACCAGCAAAGAGTTCAGGAAAACATGGGGTT...GGTAAGTATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAACTGCGAAGGCGATTCTaGAGCTCTTTCAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQLRRRF*SSFKVR
Trigger: CCTGACCTTGAAAGAGCTTCAGAATCGCCTTCGCAG...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACTGCGAAGGCGATTCTaGAGCTCTTTCAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: CGKTEAYTALLSEQLMCRLRRRF*SSFKVR
Trigger: CCTGACCTTGAAAGAGCTTCAGAATCGCCTTCGCAG...TCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp ACCATGGAAGTGTGTGAGATTTCACGCACACGCATTCATGTCAACAAGGACATCCTGATCTGCCGTTTCTaGATGAGTCTCATCCTGCAC +
Preference number: 4 (lower is better)
Translates to: TMEVCEISRTRIHVNKDILICRF*MSLILH
Trigger: GTGCAGGATGAGACTCATTCAGAAACGGCAGATCAG...GATGTCCTTGTTGACATGAATGCGTGTGCGTGAAATCTCACACACTTCCATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCCAGGCTGGAAGATCTTaGGTTTCTTCTTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLQAGRS*VSSCHL
Trigger: CAAGTGGCAAGAAGAAACTCAAGATCTTCCAGCCTG...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAAGTCATCGCTGTCATTaGCTCTTTTCCACAAAATCT +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGESHRCH*LFSTKS
Trigger: AGATTTTGTGGAAAAGAGTCAATGACAGCGATGACT...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTATCCTCCCACCAATGTaGATTGTGTCAGGCAAATCC +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCILPPM*IVSGKS
Trigger: GGATTTGCCTGACACAATTCACATTGGTGGGAGGAT...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGGGGAAATTGGGGCCGTaGAGCCCTGACATCCCCAAA +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQGKLGP*SPDIPK
Trigger: TTTGGGGATGTCAGGGCTTCACGGCCCCAATTTCCC...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTTCAAACTGGTTGGGATaGGGGCCCCGGGCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVSNWLG*GPRAVS
Trigger: TGAAACTGCCCGGGGCCCTCATCCCAACCAGTTTGA...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGAGTGACAGGAAGTCCTaGCAGACTAGGGATGGACAC +
Preference number: 4 (lower is better)
Translates to: GQCGKTEAYTALLSEQLMSDRKS*QTRDGH
Trigger: GTGTCCATCCCTAGTCTGTCAGGACTTCCTGTCACT...CATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp ACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCAGGACAGTGTTCTAACAATGTGGAAAAACTaGAGCGTATACAGCGCTGTT +
Preference number: 4 (lower is better)
Translates to: TCRIPSPRHASCGQDSVLTMWKN*SVYSAV
Trigger: AACAGCGCTGTATACGCTTCAGTTTTTCCACATTGT...TAGAACACTGTCCTGACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp ATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTTTCTTCTAAGGGGCTATaGAAGAGCTGGTCACTAACA +
Preference number: 4 (lower is better)
Translates to: MDESVTLFCVNLYPQQDLSSKGL*KSWSLT
Trigger: TGTTAGTGACCAGCTCTTTCATAGCCCCTTAGAAGA...AAGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp CATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTTTTGTCGTCCATACCTaGTCCAACACTGAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: HVLAVDNVEKLKRIQRCCFVVHT*SNTESL
Trigger: CAAGCTTTCAGTGTTGGAGCAGGTATGGACGACAAA...ACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACGAGGCTGGCGGCAAATaGAATACAGGGCGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHEAGGK*NTGRWG
Trigger: ACCCCAACGCCCTGTATTGCATTTGCCGCCAGCCTC...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GTGATGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACACTCGAGCCTCAGAAATaGCCACACAATCGCCATGAA +
Preference number: 4 (lower is better)
Translates to: VMLSCAGRGQCGKTEAYTLEPQK*PHNRHE
Trigger: TTCATGGCGATTGTGTGGGCATTTCTGAGGCTCGAG...TGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTGCACTTGCAGAATGGTaGAGTTTGGGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: HVLAVDNVEKLKRIQRCCALAEW*SLGRYS
Trigger: ACTATATCTGCCCAAACTGCACCATTCTGCAAGTGC...ACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCGCACTTGCAGAATGGTaGAGTTTGGGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: CFHVLAVDNVEKLKRIQRALAEW*SLGRYS
Trigger: ACTATATCTGCCCAAACTGCACCATTCTGCAAGTGC...GCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GTGATGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGTCTCATCCTGCACTTaGAGAATGGTGCAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: VMLSCAGRGQCGKTEAYTVSSCT*RMVQFG
Trigger: CCCAAACTGCACCATTCTGCAAGTGCAGGATGAGAC...TGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp ACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCAGGACAGTGTTCTACTTGCCACTTGGATTTaGAGCTTTCTCAATTCTACC +
Preference number: 4 (lower is better)
Translates to: TCRIPSPRHASCGQDSVLLATWI*SFLNST
Trigger: GGTAGAATTGAGAAAGCTGCAAATCCAAGTGGCAAG...TAGAACACTGTCCTGACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATAGGAGCTGGTCTCTTGTaGACAGAAGAGATTTTAATA +
Preference number: 4 (lower is better)
Translates to: DVACRAVWLCNQTGMKRIGAGLL*TEEILI
Trigger: TATTAAAATCTCTTCTGTGCACAAGAGACCAGCTCC...TATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGCGCAGGGACCACCACTaGCTTCTTCACTGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQRRDHH*LLHCGL
Trigger: GAGACCACAGTGAAGAAGGCAGTGGTGGTCCCTGCG...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp ACCATGGAAGTGTGTGAGATTTCACGCACACGCATTCATGTCAACAAGGACATCGGCTGGTGTGGCTGCTaGCACATTAGCAAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: TMEVCEISRTRIHVNKDIGWCGC*HISKRR
Trigger: TCTTCTTTTGCTAATGTGGCAGCAGCCACACCAGCC...GATGTCCTTGTTGACATGAATGCGTGTGCGTGAAATCTCACACACTTCCATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAGGTGCAGAGCTGTCATaGTTTGATTTTAAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEGAELS*FDFKSS
Trigger: AGAAGACTTAAAATCAAAGCATGACAGCTCTGCACC...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAAAGAGTCTGCAGGATGTaGTCCAGCGGTGATGCTGTT +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQRVCRM*SSGDAV
Trigger: AACAGCATCACCGCTGGAGCACATCCTGCAGACTCT...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp AAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCAGGACCACCTGAAAATCAGATaGAACACTAACTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: KPVTCRIPSPRHASCGQDHLKIR*NTNLQR
Trigger: TCTTTGCAAGTTAGTGTTGCATCTGATTTTCAGGTG...GTCCTGACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp ACCCAGACGCCTCTGCTCTTTATCGTGGATCAAAGTCCCTGGGGCTTTTGTGTGACTTTCCAAGGAACGTaGAAACACAAAATAGCTTGC +
Preference number: 4 (lower is better)
Translates to: TQTPLLFIVDQSPWGFCVTFQGT*KHKIAC
Trigger: GCAAGCTATTTTGTGTTTGCACGTTCCTTGGAAAGT...CACACAAAAGCCCCAGGGACTTTGATCCACGATAAAGAGCAGAGGCGTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp TTCACGCACACGCATTCATGTCAACAAGGACATCAGGAGAAGTTAACATTATACGGCGGTGTTTCCTCCTaGCCTGTACTTGGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: FTHTHSCQQGHQEKLTLYGGVSS*PVLGEN
Trigger: GTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCC...GTATAATGTTAACTTCTCCTGATGTCCTTGTTGACATGAATGCGTGTGCGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGGGCAGACGAAACCTCTaGGTCCAAGCAGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQGRRNL*VQADSQ
Trigger: CTGGCTGTCTGCTTGGACCCAGAGGTTTCGTCTGCC...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGACTGGGGGCCGCTTCTaGTCTCAGAAGCGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQTGGRF*SQKRFP
Trigger: TGGAAAGCGCTTCTGAGACCAGAAGCGGCCCCCAGT...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp AATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCATCGGAGGTGTCATCGTaGTCATCCCCTCCTTTCACC +
Preference number: 4 (lower is better)
Translates to: NVEKLKRIQRCCQNNSCASEVSS*SSPPFT
Trigger: GGTGAAAGGAGGGGATGACCACGATGACACCTCCGA...TGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCCTACCCTTTATCCCTTaGTCTTCGCTAGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLLPFIP*SSLDFC
Trigger: GCAGAAGTCTAGCGAAGACCAAGGGATAAAGGGTAG...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCGCCTCTATCACAGGCTaGAAGATCTTGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: CFHVLAVDNVEKLKRIQRASITG*KILSFF
Trigger: GAAGAAACTCAAGATCTTCCAGCCTGTGATAGAGGC...GCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp AAGACCTCAGAGAAAAGAGCCCTTTCCATTCGAGCAGCTACAGAGGGCGGTGTTAAGACTGGGCTTCTCTaGCTTCATCTTCATCTTTTC +
Preference number: 4 (lower is better)
Translates to: KTSEKRALSIRAATEGGVKTGLL*LHLHLF
Trigger: GAAAAGATGAAGATGAAGCCAGAGAAGCCCAGTCTT...AACACCGCCCTCTGTAGCTGCTCGAATGGAAAGGGCTCTTTTCTCTGAGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGGTAGCGGAGAGCCATaGCCTCTTGGGGATGGTGCC +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRGSGEP*PLGDGA
Trigger: GGCACCATCCCCAAGAGGCCATGGCTCTCCGCTACC...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TTCACGCACACGCATTCATGTCAACAAGGACATCAGGAGAAGTTAACATTATACGGCTGGCGAGGCCATTaGAACAGAAGGTACCACTGG +
Preference number: 4 (lower is better)
Translates to: FTHTHSCQQGHQEKLTLYGWRGH*NRRYHW
Trigger: CCAGTGGTACCTTCTGTTCCAATGGCCTCGCCAGCC...GTATAATGTTAACTTCTCCTGATGTCCTTGTTGACATGAATGCGTGTGCGTGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACGGGATGGCCATCTCCTaGAGGCCCAGGGAAATACGT +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHGMAIS*RPREIR
Trigger: ACGTATTTCCCTGGGCCTCCAGGAGATGGCCATCCC...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGCCGACTGCGGGACTGTaGCTACTTTTGGATAGGCCG +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQPTAGL*LLLDRP
Trigger: CGGCCTATCCAAAAGTAGCCACAGTCCCGCAGTCGG...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTTCGCTTCTTCTAAGATaGTCTCATCCTCGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCSLLLR*SHPRGH
Trigger: ATGACCCCGAGGATGAGACCATCTTAGAAGAAGCGA...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGTCCGACACCGAGAAGTaGGCCATGGAGACCCCGACG +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRSDTEK*AMETPT
Trigger: CGTCGGGGTCTCCATGGCCCACTTCTCGGTGTCGGA...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGGACTGCTGCTCTTGCTaGAACAGCTCTGCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQDCCSC*NSSALG
Trigger: GCCCAAGGCAGAGCTGTTCCAGCAAGAGCAGCAGTC...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCCTTGGGTCCTCATACTaGGCTGAGCCGAGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCLGSSY*AEPRAL
Trigger: CAAGGCTCTCGGCTCAGCCCAGTATGAGGACCCAAG...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCTTGGTCCCGGGAAATTaGGGCCGTGAAGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCLVPGN*GREALT
Trigger: TGTCAGGGCTTCACGGCCCCAATTTCCCGGGACCAA...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTGTCCCCATAAGGAGGTaGCCCATGTTGCCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVVPIRR*PMLPRE
Trigger: TTCTCGGGGCAACATGGGCCACCTCCTTATGGGGAC...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCGTCCCCATAAGGAGGTaGCCCATGTTGCCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCVPIRR*PMLPRE
Trigger: TTCTCGGGGCAACATGGGCCACCTCCTTATGGGGAC...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCTGGTGCCACTCCTCGTaGTCCACCAAGGTAAGAGGG +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCWCHSS*STKVRG
Trigger: CCCTCTTACCTTGGTGGACCACGAGGAGTGGCACCA...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTTGGTGCCACTCCTCGTaGTCCACCAAGGTAAGAGGG +
Preference number: 4 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVWCHSS*STKVRG
Trigger: CCCTCTTACCTTGGTGGACCACGAGGAGTGGCACCA...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCTTGCGTTCTTCAAATTaGGATGGTGCCACTCCTCGT +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLLRSSN*DGATPR
Trigger: ACGAGGAGTGGCACCATCCCAATTTGAAGAACGCAA...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGCAGTGGCCTTCTCTaGCCTCCGAACTGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHSSGLL*PPNWKG
Trigger: GCCTTTCCAGTTCGGAGGCCAGAGAAGGCCACTGCT...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTAATCTTGGTGGTGAATaGACCCTCTGGTCTTCGAAC +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCNLGGE*TLWSSN
Trigger: GTTCGAAGACCAGAGGGTCCATTCACCACCAAGATT...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAATGGTTTCTGTATTCGTaGCCTTTCCCCTCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKWFLYS*PFPSRK
Trigger: CTTCCGAGAGGGGAAAGGCCACGAATACAGAAACCA...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCCTCCCTTCGAAAGTCTaGTTTCTGTATTCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLLPSKV*FLYSWP
Trigger: AGGCCACGAATACAGAAACCAGACTTTCGAAGGGAG...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGGCTATGCAATCAGACTaGGATGAAGAGAATACGAAT +
Preference number: 4 (lower is better)
Translates to: GAYEAGVCGLRSSNVFMWAMQSD*DEENTN
Trigger: ATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGC...CCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp CAAGAAAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCTTGGACACTTTTCCCTaGAATCCTAAATACAACCAA +
Preference number: 4 (lower is better)
Translates to: QESQSHVEYQVQGTRPAVLDTFP*NPKYNQ
Trigger: TTGGTTGTATTTAGGATTTCAGGGAAAAGTGTCCAA...GACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GTGATGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAAACCCCATGTTTTCCTaGACTCTTTGCTGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: VMLSCAGRGQCGKTEAYTNPMFS*TLCWWV
Trigger: AACCCACCAGCAAAGAGTTCAGGAAAACATGGGGTT...TGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp AATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCACTGCGAAGGCGATTCTaGAGCTCTTTCAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: NVEKLKRIQRCCQNNSCALRRRF*SSFKVR
Trigger: CCTGACCTTGAAAGAGCTTCAGAATCGCCTTCGCAG...TGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAATAAACCTGTTGTTGTaGGGCTGGCGGCAAATGCAA +
Preference number: 4 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKINLLL*GWRQMQ
Trigger: TTGCATTTGCCGCCAGCCTCACAACAACAGGTTTAT...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACTGATCTGCCGTTTCTaGATGAGTCTCATCCTGCAC +
Preference number: 4 (lower is better)
Translates to: CGKTEAYTALLSEQLMCRLICRF*MSLILH
Trigger: GTGCAGGATGAGACTCATTCAGAAACGGCAGATCAG...TCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATACGAATACTTACCAGCAGGCTGGAAGATCTTaGGTTTCTTCTTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: GSVAMQSDWDEENTNTYQQAGRS*VSSCHL
Trigger: CAAGTGGCAAGAAGAAACTCAAGATCTTCCAGCCTG...CTGGTAAGTATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp AATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCATCGCTGCGGCGTGTTTaGGGATACAGTCATTACTGC +
Preference number: 4 (lower is better)
Translates to: NVEKLKRIQRCCQNNSCASLRRV*GYSHYC
Trigger: GCAGTAATGACTGTATCCTCAAACACGCCGCAGCGA...TGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp CATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTCTTTTAAGGAGCGTCTaGTATTTTGCCGAATTTGTG +
Preference number: 4 (lower is better)
Translates to: HGRVSHSFLRESLPPTGPLLRSV*YFAEFV
Trigger: CACAAATTCGGCAAAATATCAGACGCTCCTTAAAAG...AGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGCTCTTGCTGTTCCTCTaGATCCGACACTGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQLLLFL*IRHWRR
Trigger: TCTCCGCCAGTGTCGGATTCAGAGGAACAGCAAGAG...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTCTTTCAACATGCTGCTaGAGACGTCGAGAAGCGGCG +
Preference number: 4 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVLSTCC*RRREAA
Trigger: CGCCGCTTCTCGACGTCTTCAGCAGCATGTTGAAAG...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCAGCGGCCACGGCTGCTaGAATAGGAGTAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCSGHGC*NRSRER
Trigger: TCTCTCTCTACTCCTATTTCAGCAGCCGTGGCCGCT...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCCTCATACTGGGCTaGGCCGAGAGCCTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRVLILG*AESLVL
Trigger: CAGGACAAGGCTCTCGGCTCAGCCCAGTATGAGGAC...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGAACATTTATACAACAGTaGCGGCGAGGGAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: CGKTEAYTALLSEQLMCRTFIQQ*RRGSSS
Trigger: ACTGCTGCTCCCTCGCCGTCACTGTTGTATAAATGT...TCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp TCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGATTGCACCACAGAATCTaGGGTTTCAAAGATCTGTTT +
Preference number: 4 (lower is better)
Translates to: SGQCSRCELTYRGAYEAGLHHRI*GFKDLF
Trigger: AAACAGATCTTTGAAACCTCAGATTCTGTGGTGCAA...TCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACCCTGTTCCCGCTTCCTaGGAAGGCGATTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHPVPAS*EGDSEA
Trigger: AGCTTCAGAATCGCCTTCGCAGGAAGCGGGAACAGG...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp ATAAATGTACACCTGAAAATCAGATGCAACACTAACTTGCAAAGATTCCCACAATCGTTCTCGGGCTCCTaGTTACTGGGCAGGACGCCC +
Preference number: 4 (lower is better)
Translates to: INVHLKIRCNTNLQRFPQSFSGS*LLGRTP
Trigger: GGGCGTCCTGCCCAGTAAGCAGGAGCCCGAGAACGA...TTGTGGGAATCTTTGCAAGTTAGTGTTGCATCTGATTTTCAGGTGTACATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAAGTCTCATCCTGCACTTaGAGAATGGTGCAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQVSSCT*RMVQFG
Trigger: CCCAAACTGCACCATTCTGCAAGTGCAGGATGAGAC...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGTCTTCGCTAGACTTCTaGTCTATTGTTCCTATACTT +
Preference number: 4 (lower is better)
Translates to: GAYEAGVCGLRSSNVFMWSSLDF*SIVPIL
Trigger: AAGTATAGGAACAATAGAGCAGAAGTCTAGCGAAGA...CCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCAGGATACAGTCATTACTaGAGTACACCGAGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: VDNVEKLKRIQRCCQNNSGYSHY*STPSRA
Trigger: AGCCCGACTCGGTGTACTGCAGTAATGACTGTATCC...TGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGGGATACAGTCATTACTaGAGTACACCGAGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: GQCGKTEAYTALLSEQLMGYSHY*STPSRA
Trigger: AGCCCGACTCGGTGTACTGCAGTAATGACTGTATCC...CATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGGAGCTGGTCTCTTGTaGACAGAAGAGATTTTAATA +
Preference number: 4 (lower is better)
Translates to: DSVLGVNSLTVGPMKQECGAGLL*TEEILI
Trigger: TATTAAAATCTCTTCTGTGCACAAGAGACCAGCTCC...ACACTCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGGGAGCTGGTCTCTTGTaGACAGAAGAGATTTTAATA +
Preference number: 4 (lower is better)
Translates to: EAYTALLSEQLMCRQGWMGAGLL*TEEILI
Trigger: TATTAAAATCTCTTCTGTGCACAAGAGACCAGCTCC...CATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTGGAGCTGGTCTCTTGTaGACAGAAGAGATTTTAATA +
Preference number: 4 (lower is better)
Translates to: HGRVSHSFLRESLPPTGPGAGLL*TEEILI
Trigger: TATTAAAATCTCTTCTGTGCACAAGAGACCAGCTCC...AGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTGCTGCTCTCACAAGCTaGTTCCTTCCCGAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVAALTS*FLPECF
Trigger: GAAGCACTCGGGAAGGAAGCAGCTTGTGAGAGCAGC...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGTCGCCCACGACGGCGTaGTGCTCTCACAAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRSPTTA*CSHKLL
Trigger: AAGCAGCTTGTGAGAGCAGCACGCCGTCGTGGGCGA...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAAGGCTGGTGTGGCTGCTaGCACATTAGCAAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQGWCGC*HISKRR
Trigger: TCTTCTTTTGCTAATGTGGCAGCAGCCACACCAGCC...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTGAGCGTCTGATATTTTaGCGAATTTGTGAATTTGGC +
Preference number: 4 (lower is better)
Translates to: HGRVSHSFLRESLPPTGPERLIF*RICEFG
Trigger: GCCAAATTCACAAATTCGGCAAAATATCAGACGCTC...AGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAATTTCCAAAGAGAGTCTaGAGGATGTGCTCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQFPKRV*RMCSSG
Trigger: ACCGCTGGAGCACATCCTGCAGACTCTCTTTGGAAA...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGCACCTGCAGGGCTGCTaGTCCTTCCAGCAGAATGAA +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQHLQGC*SFQQNE
Trigger: TTCATTCTGCTGGAAGGAGCAGCAGCCCTGCAGGTG...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGGATGCAACACTAACTTaGAAAGATTCCCACAACATA +
Preference number: 4 (lower is better)
Translates to: SLTVGPMKQECVAFEVRMDATLT*KDSHNI
Trigger: TATGTTGTGGGAATCTTTGCAAGTTAGTGTTGCATC...CATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACGGTAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGCACCTGAAAATCAGATaGAACACTAACTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: RGAYEAGVCGLRSSNVFMHLKIR*NTNLQR
Trigger: TCTTTGCAAGTTAGTGTTGCATCTGATTTTCAGGTG...CATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGCACCTGAAAATCAGATaGAACACTAACTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: GQDSVLGVNSLTVGPMKQHLKIR*NTNLQR
Trigger: TCTTTGCAAGTTAGTGTTGCATCTGATTTTCAGGTG...CTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATACACCTGAAAATCAGATaGAACACTAACTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: DVACRAVWLCNQTGMKRIHLKIR*NTNLQR
Trigger: TCTTTGCAAGTTAGTGTTGCATCTGATTTTCAGGTG...TATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TTCACGCACACGCATTCATGTCAACAAGGACATCAGGAGAAGTTAACATTATACCAATCCTCTGGGGACTaGATGGCCACGGAGACACTT +
Preference number: 4 (lower is better)
Translates to: FTHTHSCQQGHQEKLTLYQSSGD*MATETL
Trigger: AAGTGTCTCCGTGGCCATGCAGTCCCCAGAGGATTG...GTATAATGTTAACTTCTCCTGATGTCCTTGTTGACATGAATGCGTGTGCGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp GTGATGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACATACAACCAAAAACCCTaGCAGACGAAACCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: VMLSCAGRGQCGKTEAYTYNQKP*QTKPLG
Trigger: ACCCAGAGGTTTCGTCTGCCAGGGTTTTTGGTTGTA...TGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAATACAACCAAAAACCCTaGCAGACGAAACCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKYNQKP*QTKPLG
Trigger: ACCCAGAGGTTTCGTCTGCCAGGGTTTTTGGTTGTA...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATACGAATACTTACCAGCTACCCTTTATCCCTTaGTCTTCGCTAGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: GSVAMQSDWDEENTNTYQLPFIP*SSLDFC
Trigger: GCAGAAGTCTAGCGAAGACCAAGGGATAAAGGGTAG...CTGGTAAGTATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTAAGACTGGGCTTCTCTaGCTTCATCTTCATCTTTTC +
Preference number: 4 (lower is better)
Translates to: HVLAVDNVEKLKRIQRCCKTGLL*LHLHLF
Trigger: GAAAAGATGAAGATGAAGCCAGAGAAGCCCAGTCTT...ACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACATCCTGTCTTCCTTCGTaGATTTATACAACAGTGACG +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTSCLPS*IYTTVT
Trigger: CGTCACTGTTGTATAAATCCACGAAGGAAGACAGGA...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGAAGGCGTCCTGGGGCTaGCGAGGCCATTGGAACAGA +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRKASWG*RGHWNR
Trigger: TCTGTTCCAATGGCCTCGCCAGCCCCAGGACGCCTT...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAATCTCCTTCTCAATATaGAGGGCAATTTTTCCTACT +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEISFSI*RAIFPT
Trigger: AGTAGGAAAAATTGCCCTCCATATTGAGAAGGAGAT...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CAAGGACAAATGTCCTCAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCATCTCCTTCTCAATATaGAGGGCAATTTTTCCTACT +
Preference number: 4 (lower is better)
Translates to: QGQMSSGRSSYCCELHGSISFSI*RAIFPT
Trigger: AGTAGGAAAAATTGCCCTCCATATTGAGAAGGAGAT...GGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTGAGGACATTTGTCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCGTGCGCGGTGCTGACTaGTGGTGTCTTTCAACATGC +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCVRGAD*WCLSTC
Trigger: GCATGTTGAAAGACACCACCAGTCAGCACCGCGCAC...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACGCGGTGATGCTGTTTTaGAAGCAGACGAAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHAVMLF*KQTKRW
Trigger: CCACCGCTTCGTCTGCTTCCAAAACAGCATCACCGC...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACGGACGACTTTGGTGGTaGAGACATCAAGGCGTCCGA +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHGRLWW*RHQGVR
Trigger: TCGGACGCCTTGATGTCTCCACCACCAAAGTCGTCC...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGCGATATTCTCTTCTaGAAACGGAGGGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHSDILF*KRRGWP
Trigger: GGGCCAGCCCCTCCGTTTCCAGAAGAGAATATCGCT...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGTGGCGGAGGCCCTCGTaGCCCATCGTTAGAAGCGAT +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRWRRPS*PIVRSD
Trigger: ATCGCTTCTAACGATGGGCCACGAGGGCCTCCGCCA...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAATGTAGTGACGTACAATaGAATAACAGACTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: FGAERTFPGIQKNCSEGECSDVQ*NNRLQR
Trigger: TCTTTGGAGTCTGTTATTCCATTGTACGTCACTACA...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GTCACGTGGAGCTGGCCAGAGCTCTTCACAAGCAACACCAAGAACCTCTACCAGTACAGAAAGACACTATaGATTCAAACATTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: VTWSWPELFTSNTKNLYQYRKTL*IQTFFP
Trigger: TGGGAAGAATGTTTGAATCCATAGTGTCTTTCTGTA...CTGGTAGAGGTTCTTGGTGTTGCTTGTGAAGAGCTCTGGCCAGCTCCACGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp CAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGGTGTGTAGCGTGTTTGGACACTTTTCCCTaGAATCCTAAATACAACCAA +
Preference number: 4 (lower is better)
Translates to: QECVAFEVRMCSCGCVACLDTFP*NPKYNQ
Trigger: TTGGTTGTATTTAGGATTTCAGGGAAAAGTGTCCAA...ACACGCTACACACCCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp TTCACGCACACGCATTCATGTCAACAAGGACATCAGGAGAAGTTAACATTATACTCATCTTTGATGTCCTaGGCCGCCTTTCCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: FTHTHSCQQGHQEKLTLYSSLMS*AAFPSN
Trigger: GTTGGAGGGAAAGGCGGCTCAGGACATCAAAGATGA...GTATAATGTTAACTTCTCCTGATGTCCTTGTTGACATGAATGCGTGTGCGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCTCGCTGCGGCGTGTTTaGGGATACAGTCATTACTGC +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCSLRRV*GYSHYC
Trigger: GCAGTAATGACTGTATCCTCAAACACGCCGCAGCGA...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGTCGCTGCGGCGTGTTTaGGGATACAGTCATTACTGC +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQSLRRV*GYSHYC
Trigger: GCAGTAATGACTGTATCCTCAAACACGCCGCAGCGA...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAACTTTCCAAATGGTGCTaGGTCGAGACAAAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQLSKWC*VETKRG
Trigger: CCCTCTTTTTGTCTCGACTCAGCACCATTTGGAAAG...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAATTATCTTTTGAGAACTaGCCGAACTGCTGGACGATC +
Preference number: 4 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKLSFEN*PNCWTI
Trigger: GATCGTCCAGCAGTTCGGTCAGTTCTCAAAAGATAA...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GTGATGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGTGAACGTTCACCAGTaGGGTTTACAGCTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: VMLSCAGRGQCGKTEAYTVNVHQ*GLQLWK
Trigger: TTTCCAAAGCTGTAAACCTCACTGGTGAACGTTCAC...TGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp AAGACCTCAGAGAAAAGAGCCCTTTCCATTCGAGCAGCTACAGAGGGCGGTGTTATGAAAGATGTTTATTaGTTTAGGAGGAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: KTSEKRALSIRAATEGGVMKDVY*FRRRRQ
Trigger: CTGCCTTCTCCTCCTAAATCAATAAACATCTTTCAT...AACACCGCCCTCTGTAGCTGCTCGAATGGAAAGGGCTCTTTTCTCTGAGGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAATTTGTCGTCCATACCTaGTCCAACACTGAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKFVVHT*SNTESL
Trigger: CAAGCTTTCAGTGTTGGAGCAGGTATGGACGACAAA...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp AATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCACTCGAGCCTCAGAAATaGCCACACAATCGCCATGAA +
Preference number: 4 (lower is better)
Translates to: NVEKLKRIQRCCQNNSCALEPQK*PHNRHE
Trigger: TTCATGGCGATTGTGTGGGCATTTCTGAGGCTCGAG...TGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGCACTTGCAGAATGGTaGAGTTTGGGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKALAEW*SLGRYS
Trigger: ACTATATCTGCCCAAACTGCACCATTCTGCAAGTGC...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp AATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGTCTCATCCTGCACTTaGAGAATGGTGCAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: NVEKLKRIQRCCQNNSCAVSSCT*RMVQFG
Trigger: CCCAAACTGCACCATTCTGCAAGTGCAGGATGAGAC...TGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAATACTTGTACAATCGGTaGCATCAGCATCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQYLYNR*HQHLQV
Trigger: GACCTGGAGATGCTGATGGCACCGATTGTACAAGTA...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTTCTTCGCTAGACTTCTaGTCTATTGTTCCTATACTT +
Preference number: 4 (lower is better)
Translates to: YTALLSEQLMCRQGWMWRSSLDF*SIVPIL
Trigger: AAGTATAGGAACAATAGAGCAGAAGTCTAGCGAAGA...ACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp ATAAATGTACACCTGAAAATCAGATGCAACACTAACTTGCAAAGATTCCCACAATCGCCCACGACGGCGTaGTGCTCTCACAAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: INVHLKIRCNTNLQRFPQSPTTA*CSHKLL
Trigger: AAGCAGCTTGTGAGAGCAGCACGCCGTCGTGGGCGA...TTGTGGGAATCTTTGCAAGTTAGTGTTGCATCTGATTTTCAGGTGTACATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCGCACGTGCTGACTCTTaGTGTTCCTCTGAATCCGAC +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCARADS*CSSESD
Trigger: GTCGGATTCAGAGGAACAGCAAGAGTCAGCACGTGC...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACAGGTGCAGAGCTGTCATaGTTTGATTTTAAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTGAELS*FDFKSS
Trigger: AGAAGACTTAAAATCAAAGCATGACAGCTCTGCACC...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTCCAAACTGTCTTCGGTaGGATCCTCCCACCAATGTG +
Preference number: 4 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVPNCLR*DPPTNV
Trigger: CACATTGGTGGGAGGATCGCACCGAAGACAGTTTGG...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGTTGCTGGAACAGCTCTaGCTTGGGCAAGGACGACTT +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQLLEQL*LGQGRL
Trigger: AAGTCGTCCTTGCCCAAGGCAGAGCTGTTCCAGCAA...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCAAGCTTAACACAAAGCTaGAACTCCCAGTCCTGGACA +
Preference number: 4 (lower is better)
Translates to: VDNVEKLKRIQRCCQNNSSLTQS*NSQSWT
Trigger: TGTCCAGGACTGGGAGTTGCAGCTTTGTGTTAAGCT...TGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TTCACGCACACGCATTCATGTCAACAAGGACATCAGGAGAAGTTAACATTATACTACCAGGGTCCTTTCTaGCACCCATTAGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: FTHTHSCQQGHQEKLTLYYQGPF*HPLGGI
Trigger: GATGCCACCTAATGGGTGGCAGAAAGGACCCTGGTA...GTATAATGTTAACTTCTCCTGATGTCCTTGTTGACATGAATGCGTGTGCGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAATGGCTTTTTAATGGCTaGTGTGGCTGCTGCCACATT +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQWLFNG*CGCCHI
Trigger: AATGTGGCAGCAGCCACACCAGCCATTAAAAAGCCA...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGAATGCCCCTGGGACCTaGCATAAAGTTAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQNAPGT*HKVRRL
Trigger: CAAGCGCCTAACTTTATGCCAGGTCCCAGGGGCATT...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCGGTGCAGGCGCCCTTTaGTTTGTGAATCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCGAGAL*FVNLGG
Trigger: ACCACCAAGATTCACAAACCAAAGGGCGCCTGCACC...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp AATTTGAAATTTGGGGCAGGATATGATCTTAAGAGTCTAAACATTCAAGAGACGGCGTGCCGGGCAGTGTaGCTATGCAATCAGACTGGG +
Preference number: 4 (lower is better)
Translates to: NLKFGAGYDLKSLNIQETACRAV*LCNQTG
Trigger: CCCAGTCTGATTGCATAGCCACACTGCCCGGCACGC...CGTCTCTTGAATGTTTAGACTCTTAAGATCATATCCTGCCCCAAATTTCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp GTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCAGATGCTTTCATGTGCTaGCCGTGGACAATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: VDNVEKLKRIQRCCQNNSDAFMC*PWTMWK
Trigger: TTTCCACATTGTCCACGGCCAGCACATGAAAGCATC...TGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp AATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCATACCTGCTCCAACACTaGAAGCTTGGACACTTTTCC +
Preference number: 4 (lower is better)
Translates to: NVEKLKRIQRCCQNNSCAYLLQH*KLGHFS
Trigger: GGAAAAGTGTCCAAGCTTTCAGTGTTGGAGCAGGTA...TGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCCTGATCTGCCGTTTCTaGATGAGTCTCATCCTGCAC +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCLICRF*MSLILH
Trigger: GTGCAGGATGAGACTCATTCAGAAACGGCAGATCAG...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTCGATGGAAGAGTCCCTaGTTTTTAGGGTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVRWKSP*FLGSFR
Trigger: CCTGAAGGACCCTAAAAATCAGGGACTCTTCCATCG...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGCGATGGAAGAGTCCCTaGTTTTTAGGGTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQRWKSP*FLGSFR
Trigger: CCTGAAGGACCCTAAAAATCAGGGACTCTTCCATCG...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGTGTGAATCTTGGTGGTaGATGGACCCTCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQCESWW*MDPLVF
Trigger: GAAGACCAGAGGGTCCATTCACCACCAAGATTCACA...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAAGGAAACACAAACGGATaGGATGTCAGTGAAGGTATG +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQGNTNG*DVSEGM
Trigger: CATACCTTCACTGACATCTCATCCGTTTGTGTTTCC...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACAGACCAACAAAACTCCTaGTTATTCAAATCAAGGACT +
Preference number: 4 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTDQQNS*LFKSRT
Trigger: AGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTC...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp CGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATACGAATACTTACCAATCAATCATTAAGGTaGACGTTCACCAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: RAVWLCNQTGMKRIRILTNQSLR*TFTSEV
Trigger: AACCTCACTGGTGAACGTTCACCTTAATGATTGATT...GGTAAGTATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACCTCGAGCCTCAGAAATaGCCACACAATCGCCATGAA +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHLEPQK*PHNRHE
Trigger: TTCATGGCGATTGTGTGGGCATTTCTGAGGCTCGAG...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGGTCTCATCCTGCACTTaGAGAATGGTGCAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQVSSCT*RMVQFG
Trigger: CCCAAACTGCACCATTCTGCAAGTGCAGGATGAGAC...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACGGATACAGTCATTACTaGAGTACACCGAGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHGYSHY*STPSRA
Trigger: AGCCCGACTCGGTGTACTGCAGTAATGACTGTATCC...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCAAAACTTCATTGTCGCTaGGGCGTGTTTGAGGATACA +
Preference number: 4 (lower is better)
Translates to: VDNVEKLKRIQRCCQNNSKLHCR*GVFEDT
Trigger: TGTATCCTCAAACACGCCGCAGCGACAATGAAGTTT...TGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCGGAGCTGGTCTCTTGTaGACAGAAGAGATTTTAATA +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLGAGLL*TEEILI
Trigger: TATTAAAATCTCTTCTGTGCACAAGAGACCAGCTCC...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACGGCTTCTTTTCCGACTaGGGGACTGTGGCTACTTTT +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHGFFSD*GTVATF
Trigger: AAAAGTAGCCACAGTCCCGCAGTCGGAAAAGAAGCC...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACCTGAGAGCTTCTTCTTaGTCCTCCAGCTGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHLRASS*SSSCLF
Trigger: GAAGAGACAGCTGGAGGAGCAAGAAGAAGCTCTCAG...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCTGCAATACAGGGCGTTaGGGTCGTAACCCTCACATT +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCCNTGR*GRNPHI
Trigger: AATGTGAGGGTTACGACCCCAACGCCCTGTATTGCA...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTGCGCGGTGCTGACTaGTGGTGTCTTTCAACATGC +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRVRGAD*WCLSTC
Trigger: GCATGTTGAAAGACACCACCAGTCAGCACCGCGCAC...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TTCACGCACACGCATTCATGTCAACAAGGACATCAGGAGAAGTTAACATTATACTCTGCGGAGGGAACCTaGCCTGTGCAAATTTTACAG +
Preference number: 4 (lower is better)
Translates to: FTHTHSCQQGHQEKLTLYSAEGT*PVQILQ
Trigger: CTGTAAAATTTGCACAGGCCAGGTTCCCTCCGCAGA...GTATAATGTTAACTTCTCCTGATGTCCTTGTTGACATGAATGCGTGTGCGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCGTCTGCAGAGCAGAGTaGATACTTGGAGGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCVCRAE*ILGGLL
Trigger: AAGAAGCCCTCCAAGTATCCACTCTGCTCTGCAGAC...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGAGAATAAGGAAGGGATaGGCCCCTTCTGGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRRIRKG*APSGLR
Trigger: TCGGAGCCCAGAAGGGGCCCATCCCTTCCTTATTCT...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACTGGTTTCTGTATTCGTaGCCTTTCCCCTCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHWFLYS*PFPSRK
Trigger: CTTCCGAGAGGGGAAAGGCCACGAATACAGAAACCA...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCTTGGACACTTTTCCCTaGAATCCTAAATACAACCAA +
Preference number: 4 (lower is better)
Translates to: QLPVSFAVLELVITSSRLLDTFP*NPKYNQ
Trigger: TTGGTTGTATTTAGGATTTCAGGGAAAAGTGTCCAA...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTTACCTGCTCCAACACTaGAAGCTTGGACACTTTTCC +
Preference number: 4 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVYLLQH*KLGHFS
Trigger: GGAAAAGTGTCCAAGCTTTCAGTGTTGGAGCAGGTA...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCTACCTGCTCCAACACTaGAAGCTTGGACACTTTTCC +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCYLLQH*KLGHFS
Trigger: GGAAAAGTGTCCAAGCTTTCAGTGTTGGAGCAGGTA...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCAACCCCATGTTTTCCTaGACTCTTTGCTGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCNPMFS*TLCWWV
Trigger: AACCCACCAGCAAAGAGTTCAGGAAAACATGGGGTT...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTATAAACCTGTTGTTGTaGGGCTGGCGGCAAATGCAA +
Preference number: 4 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVINLLL*GWRQMQ
Trigger: TTGCATTTGCCGCCAGCCTCACAACAACAGGTTTAT...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGCCCACACAATCGCCATaGAACCATTCTTCACAGCGG +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRPTQSP*NHSSQR
Trigger: CCGCTGTGAAGAATGGTTTCATGGCGATTGTGTGGG...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGCAGGCTGGAAGATCTTaGGTTTCTTCTTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQQAGRS*VSSCHL
Trigger: CAAGTGGCAAGAAGAAACTCAAGATCTTCCAGCCTG...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp AATTTGAAATTTGGGGCAGGATATGATCTTAAGAGTCTAAACATTCAAGAGACGGGGGCCAATACATTTTaGGGCACCAGGCGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: NLKFGAGYDLKSLNIQETGANTF*GTRRLY
Trigger: ATAGAGGCGCCTGGTGCCTCAAAATGTATTGGCCCC...CGTCTCTTGAATGTTTAGACTCTTAAGATCATATCCTGCCCCAAATTTCAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGCGGATGAGATGTCAGTaGAGGTATGGCTCTAGGGTC +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRRMRCQ*RYGSRV
Trigger: GACCCTAGAGCCATACCTTCACTGACATCTCATCCG...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCAACAATGTGGAAAAACTaGAGCGTATACAGCGCTGTT +
Preference number: 4 (lower is better)
Translates to: VDNVEKLKRIQRCCQNNSTMWKN*SVYSAV
Trigger: AACAGCGCTGTATACGCTTCAGTTTTTCCACATTGT...TGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATACGAATACTTACCAGTTGCACCACAGAATCTaGGGTTTCAAAGATCTGTTT +
Preference number: 4 (lower is better)
Translates to: GSVAMQSDWDEENTNTYQLHHRI*GFKDLF
Trigger: AAACAGATCTTTGAAACCTCAGATTCTGTGGTGCAA...CTGGTAAGTATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATACGAATACTTACCTCTTCGCTAGACTTCTaGTCTATTGTTCCTATACTT +
Preference number: 4 (lower is better)
Translates to: RAVWLCNQTGMKRIRILTSSLDF*SIVPIL
Trigger: AAGTATAGGAACAATAGAGCAGAAGTCTAGCGAAGA...GGTAAGTATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAACTTGCCACTTGGATTTaGAGCTTTCTCAATTCTACC +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQLATWI*SFLNST
Trigger: GGTAGAATTGAGAAAGCTGCAAATCCAAGTGGCAAG...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGAGCGTCTGATATTTTaGCGAATTTGTGAATTTGGC +
Preference number: 4 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKERLIF*RICEFG
Trigger: GCCAAATTCACAAATTCGGCAAAATATCAGACGCTC...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp ACCATGGAAGTGTGTGAGATTTCACGCACACGCATTCATGTCAACAAGGACATCTTCTTGCTTTCATTGTaGAGTTTAGTTCTGGACTCC +
Preference number: 4 (lower is better)
Translates to: TMEVCEISRTRIHVNKDIFLLSL*SLVLDS
Trigger: GGAGTCCAGAACTAAACTGCACAATGAAAGCAAGAA...GATGTCCTTGTTGACATGAATGCGTGTGCGTGAAATCTCACACACTTCCATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGTCCAGCTGTCTCTTCTaGTCCTCGATCTGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQSSCLF*SSICLF
Trigger: GAACAAACAGATCGAGGAGCAGAAGAGACAGCTGGA...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGCCCAGAAATGGGGCTTaGTCTGTCCCTTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRPRNGA*SVPSNW
Trigger: CCAGTTTGAAGGGACAGAGCAAGCCCCATTTCTGGG...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGTACAACCAAAAACCCTaGCAGACGAAACCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQYNQKP*QTKPLG
Trigger: ACCCAGAGGTTTCGTCTGCCAGGGTTTTTGGTTGTA...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTCAGAATGGTGCAGTTTaGGCAGATATAGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVQNGAV*ADIVFP
Trigger: GGGGAAGACTATATCTGCCCAAACTGCACCATTCTG...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGCCTGCACTTGCAGAATaGTGCAGTTTGGGCAGATAT +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQPALAE*CSLGRY
Trigger: ATATCTGCCCAAACTGCACCATTCTGCAAGTGCAGG...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTATCTCCTTCTCAATATaGAGGGCAATTTTTCCTACT +
Preference number: 4 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCISFSI*RAIFPT
Trigger: AGTAGGAAAAATTGCCCTCCATATTGAGAAGGAGAT...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGCAGAGTGGATACTTaGAGGGCTTCTTTTCCGACT +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHSRVDT*RASFPT
Trigger: AGTCGGAAAAGAAGCCCTCCAAGTATCCACTCTGCT...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGTCGCTTCTTCTAAGATaGTCTCATCCTCGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQSLLLR*SHPRGH
Trigger: ATGACCCCGAGGATGAGACCATCTTAGAAGAAGCGA...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGCAAGGACGACTTTGGTaGTGGAGACATCAAGGCGTC +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRQGRLW*WRHQGV
Trigger: GACGCCTTGATGTCTCCACCACCAAAGTCGTCCTTG...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGATAAAGTTAGGCGCTTaGCCTCTGGGTCCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQIKLGA*PLGPSN
Trigger: GTTTGAAGGACCCAGAGGCCAAGCGCCTAACTTTAT...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCATAAAGTTAGGCGCTTaGCCTCTGGGTCCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCIKLGA*PLGPSN
Trigger: GTTTGAAGGACCCAGAGGCCAAGCGCCTAACTTTAT...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACCTCCCTTCGAAAGTCTaGTTTCTGTATTCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHLPSKV*FLYSWP
Trigger: AGGCCACGAATACAGAAACCAGACTTTCGAAGGGAG...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp ATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTTCAACCAATCCCTTTATaGACATATAATTCCACAACA +
Preference number: 4 (lower is better)
Translates to: MDESVTLFCVNLYPQQDLQPIPL*TYNSTT
Trigger: TGTTGTGGAATTATATGTCCATAAAGGGATTGGTTG...AAGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp ATAAATGTACACCTGAAAATCAGATGCAACACTAACTTGCAAAGATTCCCACAATCGCTGCGGCGTGTTTaGGGATACAGTCATTACTGC +
Preference number: 4 (lower is better)
Translates to: INVHLKIRCNTNLQRFPQSLRRV*GYSHYC
Trigger: GCAGTAATGACTGTATCCTCAAACACGCCGCAGCGA...TTGTGGGAATCTTTGCAAGTTAGTGTTGCATCTGATTTTCAGGTGTACATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACATTTTGCCGAATTTGTaGATTTGGCTGCGATGGTGC +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHILPNL*IWLRWC
Trigger: GCACCATCGCAGCCAAATTCACAAATTCGGCAAAAT...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGTTATCTTTTGAGAACTaGCCGAACTGCTGGACGATC +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQLSFEN*PNCWTI
Trigger: GATCGTCCAGCAGTTCGGTCAGTTCTCAAAAGATAA...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp ATAAATGTACACCTGAAAATCAGATGCAACACTAACTTGCAAAGATTCCCACAAAGTGACAGGAAGTCCTaGCAGACTAGGGATGGACAC +
Preference number: 4 (lower is better)
Translates to: INVHLKIRCNTNLQRFPQSDRKS*QTRDGH
Trigger: GTGTCCATCCCTAGTCTGTCAGGACTTCCTGTCACT...TTGTGGGAATCTTTGCAAGTTAGTGTTGCATCTGATTTTCAGGTGTACATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp TGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGAAATCAATCATTAAGGTaGACGTTCACCAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: CGKTEAYTALLSEQLMCRNQSLR*TFTSEV
Trigger: AACCTCACTGGTGAACGTTCACCTTAATGATTGATT...TCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp GGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTTGCACCACAGAATCTaGGGTTTCAAAGATCTGTTT +
Preference number: 4 (lower is better)
Translates to: GQCGKTEAYTALLSEQLMLHHRI*GFKDLF
Trigger: AAACAGATCTTTGAAACCTCAGATTCTGTGGTGCAA...CATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCGCACTTGCAGAATGGTaGAGTTTGGGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCALAEW*SLGRYS
Trigger: ACTATATCTGCCCAAACTGCACCATTCTGCAAGTGC...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGGGAGCTGGTCTCTTGTaGACAGAAGAGATTTTAATA +
Preference number: 4 (lower is better)
Translates to: GQCGKTEAYTALLSEQLMGAGLL*TEEILI
Trigger: TATTAAAATCTCTTCTGTGCACAAGAGACCAGCTCC...CATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGTTGTCTGCAGACTGCTaGTCTTGCTGGAACAGCTCT +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRLSADC*SCWNSS
Trigger: AGAGCTGTTCCAGCAAGAGCAGCAGTCTGCAGACAA...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TTCACGCACACGCATTCATGTCAACAAGGACATCAGGAGAAGTTAACATTATACCTTCAGGCCTTCACTTaGTTAAGTGTGAACAGCAAG +
Preference number: 4 (lower is better)
Translates to: FTHTHSCQQGHQEKLTLYLQAFT*LSVNSK
Trigger: CTTGCTGTTCACACTTAAGCAAGTGAAGGCCTGAAG...GTATAATGTTAACTTCTCCTGATGTCCTTGTTGACATGAATGCGTGTGCGTGAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CCA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAACATCGTACTAGATGTTaGAACGTGACACCTACTTTA +
Preference number: 4 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQHRTRC*NVTPTL
Trigger: TAAAGTAGGTGTCACGTTCCAACATCTAGTACGATG...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGCAGGCAAATCCTCACTaGGGTAATCAAAACACCCAG +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRQANPH*GNQNTQ
Trigger: CTGGGTGTTTTGATTACCTCAGTGAGGATTTGCCTG...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp ACCATGGAAGTGTGTGAGATTTCACGCACACGCATTCATGTCAACAAGGACATCCTTAGTGACAAATTTTaGCACACTCTGCATGTTAAT +
Preference number: 4 (lower is better)
Translates to: TMEVCEISRTRIHVNKDILSDKF*HTLHVN
Trigger: ATTAACATGCAGAGTGTGGCAAAATTTGTCACTAAG...GATGTCCTTGTTGACATGAATGCGTGTGCGTGAAATCTCACACACTTCCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR GCA 90 bp TGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGAGATGCAACACTAACTTaGAAAGATTCCCACAACATA +
Preference number: 4 (lower is better)
Translates to: CGKTEAYTALLSEQLMCRDATLT*KDSHNI
Trigger: TATGTTGTGGGAATCTTTGCAAGTTAGTGTTGCATC...TCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGAAGACTGGGCTTCTCTaGCTTCATCTTCATCTTTTC +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQKTGLL*LHLHLF
Trigger: GAAAAGATGAAGATGAAGCCAGAGAAGCCCAGTCTT...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp AATTTGAAATTTGGGGCAGGATATGATCTTAAGAGTCTAAACATTCAAGAGACGCGCATTTCGGAAGACTaGGCTTCTCTGGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: NLKFGAGYDLKSLNIQETRISED*ASLASS
Trigger: AGATGAAGCCAGAGAAGCCCAGTCTTCCGAAATGCG...CGTCTCTTGAATGTTTAGACTCTTAAGATCATATCCTGCCCCAAATTTCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAAAAGAAGACTTCTTTaGCACGAGGTTTCTAGGTGC +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHKRRLL*HEVSRC
Trigger: GCACCTAGAAACCTCGTGCCAAAGAAGTCTTCTTTT...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TTCACGCACACGCATTCATGTCAACAAGGACATCAGGAGAAGTTAACATTATACAAAAGAAGACTTCTTTaGCACGAGGTTTCTAGGTGC +
Preference number: 4 (lower is better)
Translates to: FTHTHSCQQGHQEKLTLYKRRLL*HEVSRC
Trigger: GCACCTAGAAACCTCGTGCCAAAGAAGTCTTCTTTT...GTATAATGTTAACTTCTCCTGATGTCCTTGTTGACATGAATGCGTGTGCGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR TCA 90 bp ATAAATGTACACCTGAAAATCAGATGCAACACTAACTTGCAAAGATTCCCACAATACCTGCTCCAACACTaGAAGCTTGGACACTTTTCC +
Preference number: 4 (lower is better)
Translates to: INVHLKIRCNTNLQRFPQYLLQH*KLGHFS
Trigger: GGAAAAGTGTCCAAGCTTTCAGTGTTGGAGCAGGTA...TTGTGGGAATCTTTGCAAGTTAGTGTTGCATCTGATTTTCAGGTGTACATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp AATTTGAAATTTGGGGCAGGATATGATCTTAAGAGTCTAAACATTCAAGAGACGAACCCCATGTTTTCCTaGACTCTTTGCTGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: NLKFGAGYDLKSLNIQETNPMFS*TLCWWV
Trigger: AACCCACCAGCAAAGAGTTCAGGAAAACATGGGGTT...CGTCTCTTGAATGTTTAGACTCTTAAGATCATATCCTGCCCCAAATTTCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp AATTTGAAATTTGGGGCAGGATATGATCTTAAGAGTCTAAACATTCAAGAGACGATAAACCTGTTGTTGTaGGGCTGGCGGCAAATGCAA +
Preference number: 4 (lower is better)
Translates to: NLKFGAGYDLKSLNIQETINLLL*GWRQMQ
Trigger: TTGCATTTGCCGCCAGCCTCACAACAACAGGTTTAT...CGTCTCTTGAATGTTTAGACTCTTAAGATCATATCCTGCCCCAAATTTCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR TCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGCTTTTAAGGAGCGTCTaGTATTTTGCCGAATTTGTG +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQLLRSV*YFAEFV
Trigger: CACAAATTCGGCAAAATATCAGACGCTCCTTAAAAG...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR TCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGAGTCATCGCTGTCATTaGCTCTTTTCCACAAAATCT +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQSHRCH*LFSTKS
Trigger: AGATTTTGTGGAAAAGAGTCAATGACAGCGATGACT...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGAAACTTCATTGTCGCTaGGGCGTGTTTGAGGATACA +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRKLHCR*GVFEDT
Trigger: TGTATCCTCAAACACGCCGCAGCGACAATGAAGTTT...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCTTCTTGCTTTCATTGTaGAGTTTAGTTCTGGACTCC +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCFLLSL*SLVLDS
Trigger: GGAGTCCAGAACTAAACTGCACAATGAAAGCAAGAA...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGTTCTTGCTTTCATTGTaGAGTTTAGTTCTGGACTCC +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQFLLSL*SLVLDS
Trigger: GGAGTCCAGAACTAAACTGCACAATGAAAGCAAGAA...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp AATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGATGCAACACTAACTTaGAAAGATTCCCACAACATA +
Preference number: 4 (lower is better)
Translates to: NVEKLKRIQRCCQNNSCADATLT*KDSHNI
Trigger: TATGTTGTGGGAATCTTTGCAAGTTAGTGTTGCATC...TGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp ATAAATGTACACCTGAAAATCAGATGCAACACTAACTTGCAAAGATTCCCACAATACAACCAAAAACCCTaGCAGACGAAACCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: INVHLKIRCNTNLQRFPQYNQKP*QTKPLG
Trigger: ACCCAGAGGTTTCGTCTGCCAGGGTTTTTGGTTGTA...TTGTGGGAATCTTTGCAAGTTAGTGTTGCATCTGATTTTCAGGTGTACATTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp ATAAATGTACACCTGAAAATCAGATGCAACACTAACTTGCAAAGATTCCCACAACAGAATGGTGCAGTTTaGGCAGATATAGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: INVHLKIRCNTNLQRFPQQNGAV*ADIVFP
Trigger: GGGGAAGACTATATCTGCCCAAACTGCACCATTCTG...TTGTGGGAATCTTTGCAAGTTAGTGTTGCATCTGATTTTCAGGTGTACATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CCA 90 bp AATTTGAAATTTGGGGCAGGATATGATCTTAAGAGTCTAAACATTCAAGAGACGCCTGCACTTGCAGAATaGTGCAGTTTGGGCAGATAT +
Preference number: 4 (lower is better)
Translates to: NLKFGAGYDLKSLNIQETPALAE*CSLGRY
Trigger: ATATCTGCCCAAACTGCACCATTCTGCAAGTGCAGG...CGTCTCTTGAATGTTTAGACTCTTAAGATCATATCCTGCCCCAAATTTCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACTCTTCGCTAGACTTCTaGTCTATTGTTCCTATACTT +
Preference number: 4 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHSSLDF*SIVPIL
Trigger: AAGTATAGGAACAATAGAGCAGAAGTCTAGCGAAGA...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGTCCTGTCTTCCTTCGTaGATTTATACAACAGTGACG +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRSCLPS*IYTTVT
Trigger: CGTCACTGTTGTATAAATCCACGAAGGAAGACAGGA...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGAGATACAAGTTCTTCTaGCTTCAGTCTCACAAGTTT +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQRYKFF*LQSHKF
Trigger: AAACTTGTGAGACTGAAGCCAGAAGAACTTGTATCT...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCTGTAGTGACGTACAATaGAATAACAGACTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCCSDVQ*NNRLQR
Trigger: TCTTTGGAGTCTGTTATTCCATTGTACGTCACTACA...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGGAGCTGGTCTCTTGTaGACAGAAGAGATTTTAATA +
Preference number: 4 (lower is better)
Translates to: AISKAICSTHLTNVALKRGAGLL*TEEILI
Trigger: TATTAAAATCTCTTCTGTGCACAAGAGACCAGCTCC...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGCTTAGTGACAAATTTTaGCACACTCTGCATGTTAAT +
Preference number: 4 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQLSDKF*HTLHVN
Trigger: ATTAACATGCAGAGTGTGGCAAAATTTGTCACTAAG...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR GCA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCCTTAGTGACAAATTTTaGCACACTCTGCATGTTAAT +
Preference number: 4 (lower is better)
Translates to: KSYLFNASYERGFKKGLCLSDKF*HTLHVN
Trigger: ATTAACATGCAGAGTGTGGCAAAATTTGTCACTAAG...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CCA 90 bp AATTTGAAATTTGGGGCAGGATATGATCTTAAGAGTCTAAACATTCAAGAGACGGCTATGCAATCAGACTaGGATGAAGAGAATACGAAT +
Preference number: 4 (lower is better)
Translates to: NLKFGAGYDLKSLNIQETAMQSD*DEENTN
Trigger: ATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGC...CGTCTCTTGAATGTTTAGACTCTTAAGATCATATCCTGCCCCAAATTTCAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR GCA 90 bp AATTTGAAATTTGGGGCAGGATATGATCTTAAGAGTCTAAACATTCAAGAGACGGATGCAACACTAACTTaGAAAGATTCCCACAACATA +
Preference number: 4 (lower is better)
Translates to: NLKFGAGYDLKSLNIQETDATLT*KDSHNI
Trigger: TATGTTGTGGGAATCTTTGCAAGTTAGTGTTGCATC...CGTCTCTTGAATGTTTAGACTCTTAAGATCATATCCTGCCCCAAATTTCAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS CCA 90 bp GGGCGCCGCAAGGCGGTGTGGGCAGCAGCACCCTCCGGGCAGGCCTaGCCGAGCTGTCTCCAACCGTGGCGGGGCGGGTGCCCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: GRRKAVWAAAPSGQA*PSCLQPWRGGCPPQ
Trigger: CTGGGGAGGGCACCCGCCCCGCCACGGTTGGAGACAGCTCGGCCAGGCCTGCCCGGAGGGTGCTGCTGCCCACACCGCCTTGCGGCGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 90 bp ACCGGTCCCGGTCGCGCCTCCGGTCTCGCTCGCGCTCTCGGTTCCTaGTCCGCTCCCGGCTGCGGTCCCACTCCTTGCCCCGGTCGGCCT +
Preference number: 5 (lower is better)
Translates to: TGPGRASGLARALGS*SAPGCGPTPCPGRP
Trigger: AGGCCGACCGGGGCAAGGAGTGGGACCGCAGCCGGGAGCGGAGCAGGAACCGAGAGCGCGAGCGAGACCGGAGGCGCGACCGGGACCGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 90 bp CGTGCTGCAGCGGGAAGCCGGGCTGCAGGGCGCCGCAAGGCGGTGTaGGCAGCAGCACCCTCCGGGCAGGCCTGGCCGAGCTGTCTCCAA +
Preference number: 5 (lower is better)
Translates to: RAAAGSRAAGRRKAV*AAAPSGQAWPSCLQ
Trigger: TTGGAGACAGCTCGGCCAGGCCTGCCCGGAGGGTGCTGCTGCCCACACCGCCTTGCGGCGCCCTGCAGCCCGGCTTCCCGCTGCAGCACG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 90 bp GACGCGAACCCCGGGCAGGTGAAAGGGTCCCTCTCACCGTCGTGCTaGAGCGGGAAGCCGGGCTGCAGGGCGCCGCAAGGCGGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: DANPGQVKGSLSPSC*SGKPGCRAPQGGVG
Trigger: GCCCACACCGCCTTGCGGCGCCCTGCAGCCCGGCTTCCCGCTGCAGCACGACGGTGAGAGGGACCCTTTCACCTGCCCGGGGTTCGCGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 90 bp AAAAAGGGTCTCTGCCCGGCCGGGGCGTCTAGGCCTGCGAGGCGGTaGCAGCGTCGGAGGCCCTCGAGGCCTCGGGCTTCGGGTCCCGAG +
Preference number: 5 (lower is better)
Translates to: KKGLCPAGASRPARR*QRRRPSRPRASGPE
Trigger: CTCGGGACCCGAAGCCCGAGGCCTCGAGGGCCTCCGACGCTGGCACCGCCTCGCAGGCCTAGACGCCCCGGCCGGGCAGAGACCCTTTTT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 90 bp GTGAAAGGGTCCCTCTCACCGTCGTGCTGCAGCGGGAAGCCGGGCTaGAGGGCGCCGCAAGGCGGTGTGGGCAGCAGCACCCTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: VKGSLSPSCCSGKPG*RAPQGGVGSSTLRA
Trigger: TGCCCGGAGGGTGCTGCTGCCCACACCGCCTTGCGGCGCCCTGCAGCCCGGCTTCCCGCTGCAGCACGACGGTGAGAGGGACCCTTTCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 90 bp TGCGACGCGAACCCCGGGCAGGTGAAAGGGTCCCTCTCACCGTCGTaGTGCAGCGGGAAGCCGGGCTGCAGGGCGCCGCAAGGCGGTGTG +
Preference number: 5 (lower is better)
Translates to: CDANPGQVKGSLSPS*CSGKPGCRAPQGGV
Trigger: CACACCGCCTTGCGGCGCCCTGCAGCCCGGCTTCCCGCTGCAGCACGACGGTGAGAGGGACCCTTTCACCTGCCCGGGGTTCGCGTCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 90 bp CCCTCGAGGCCTCGGGCTTCGGGTCCCGAGCGCTCTCTTTGCTCTTaGTCCGGTCCTTGCGGTCGCGGCCCCGCTCCCTGTCCCTGGCCT +
Preference number: 5 (lower is better)
Translates to: PSRPRASGPERSLCS*SGPCGRGPAPCPWP
Trigger: AGGCCAGGGACAGGGAGCGGGGCCGCGACCGCAAGGACCGGAGCAAGAGCAAAGAGAGCGCTCGGGACCCGAAGCCCGAGGCCTCGAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 90 bp CCGCAGGGACAGGCCCAGCTGCTGCTGTGGGGGTGGCGGCTCCAGTaGGTCAGCCTCCGCGTCCCCTGCGCCCTCTCGCTTGGCGATAGT +
Preference number: 5 (lower is better)
Translates to: PQGQAQLLLWGWRLQ*VSLRVPCALSLGDS
Trigger: ACTATCGCCAAGCGAGAGGGCGCAGGGGACGCGGAGGCTGACCCACTGGAGCCGCCACCCCCACAGCAGCAGCTGGGCCTGTCCCTGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 90 bp CCCACGAGGCCACCCCTGGAAGCATCTCTCTCGGGCAGGGCACCCTaGGCACCACGTGCCGAGAGCCTGGAGAGAGGCTCCCCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: PTRPPLEASLSGRAP*APRAESLERGSPSP
Trigger: GGGGGAGGGGGAGCCTCTCTCCAGGCTCTCGGCACGTGGTGCCCAGGGTGCCCTGCCCGAGAGAGATGCTTCCAGGGGTGGCCTCGTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 90 bp GGTCGCGGTTGGCGCTCCTCTCCCGGTTTCTGTCCCAGTCCCGGCTaGAGTCCTTGTCCCGGTGTCGGTCCCACTCCCGGGGCCGGTCCC +
Preference number: 5 (lower is better)
Translates to: GRGWRSSPGFCPSPG*SPCPGVGPTPGAGP
Trigger: GGGACCGGCCCCGGGAGTGGGACCGACACCGGGACAAGGACTCCAGCCGGGACTGGGACAGAAACCGGGAGAGGAGCGCCAACCGCGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 90 bp TCAGGAACTGCTCCACGCGCTCAGTGCGCTTGGGCTGCCTCCCACTaGGCCGCAGGGACAGGCCCAGCTGCTGCTGTGGGGGTGGCGGCT +
Preference number: 5 (lower is better)
Translates to: SGTAPRAQCAWAASH*AAGTGPAAAVGVAA
Trigger: AGCCGCCACCCCCACAGCAGCAGCTGGGCCTGTCCCTGCGGCGCAGTGGGAGGCAGCCCAAGCGCACTGAGCGCGTGGAGCAGTTCCTGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 90 bp ACAGGCATGCTCCTCCTGCCGCGGCGCCGCGCAATGGTCAGGAACTaGTCCACGCGCTCAGTGCGCTTGGGCTGCCTCCCACTGCGCCGC +
Preference number: 5 (lower is better)
Translates to: TGMLLLPRRRAMVRN*STRSVRLGCLPLRR
Trigger: GCGGCGCAGTGGGAGGCAGCCCAAGCGCACTGAGCGCGTGGAGCAGTTCCTGACCATTGCGCGGCGCCGCGGCAGGAGGAGCATGCCTGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 90 bp CATCTCTCTCGGGCAGGGCACCCTGGGCACCACGTGCCGAGAGCCTaGAGAGAGGCTCCCCCTCCCCCTCACCGGTCTCAGTGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: HLSRAGHPGHHVPRA*REAPPPPHRSQWPG
Trigger: GCCTGGCCACTGAGACCGGTGAGGGGGAGGGGGAGCCTCTCTCCAGGCTCTCGGCACGTGGTGCCCAGGGTGCCCTGCCCGAGAGAGATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 90 bp TTTCCTCCGGGACTGGCATGGGCGCCTGGCCCACGAGGCCACCCCTaGAAGCATCTCTCTCGGGCAGGGCACCCTGGGCACCACGTGCCG +
Preference number: 5 (lower is better)
Translates to: FPPGLAWAPGPRGHP*KHLSRAGHPGHHVP
Trigger: CGGCACGTGGTGCCCAGGGTGCCCTGCCCGAGAGAGATGCTTCCAGGGGTGGCCTCGTGGGCCAGGCGCCCATGCCAGTCCCGGAGGAAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGCTGTGCATGAACTGCTaGGAGCGGTCCTGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKLCMNC*ERSWGP
Trigger: GGGACCCCAGGACCGCTCCAAGCAGTTCATGCACAG...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGGCGCTCTCTTTGCTCTaGCTCCGGTCCTTGCGGTCG +
Preference number: 5 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKALSLL*LRSLRS
Trigger: CGACCGCAAGGACCGGAGCAAGAGCAAAGAGAGCGC...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS TCA 90 bp GGGCTGAGCCGAGAGCCTTGTCCTGCGACGCGAACCCCGGGCAGGTaGAAGGGTCCCTCTCACCGTCGTGCTGCAGCGGGAAGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: GLSREPCPATRTPGR*KGPSHRRAAAGSRA
Trigger: AGCCCGGCTTCCCGCTGCAGCACGACGGTGAGAGGGACCCTTTCACCTGCCCGGGGTTCGCGTCGCAGGACAAGGCTCTCGGCTCAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 90 bp CCTCCAGGGAGACAGGCATGCTCCTCCTGCCGCGGCGCCGCGCAATaGTCAGGAACTGCTCCACGCGCTCAGTGCGCTTGGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: PPGRQACSSCRGAAQ*SGTAPRAQCAWAAS
Trigger: GGAGGCAGCCCAAGCGCACTGAGCGCGTGGAGCAGTTCCTGACCATTGCGCGGCGCCGCGGCAGGAGGAGCATGCCTGTCTCCCTGGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS-3UTR CAA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGGTCCGCTTCTTCCGGTaGAAGTCGGGTCCGCTTTTC +
Preference number: 5 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRVRFFR*KSGPLF
Trigger: GAAAAGCGGACCCGACTTCAACCGGAAGAAGCGGAC...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS TCA 90 bp GTGGGTGCTGTCTGGGCGGGATGCTGCGGAGGCCACGGCTGTGCATaGACTGCTTGGAGCGGTCCTGGGGTCCCGGCCGGACACTGTGAC +
Preference number: 5 (lower is better)
Translates to: VGAVWAGCCGGHGCA*TAWSGPGVPAGHCD
Trigger: GTCACAGTGTCCGGCCGGGACCCCAGGACCGCTCCAAGCAGTTCATGCACAGCCGTGGCCTCCGCAGCATCCCGCCCAGACAGCACCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 90 bp CCATGTGGGTGCTGTCTGGGCGGGATGCTGCGGAGGCCACGGCTGTaGATGAACTGCTTGGAGCGGTCCTGGGGTCCCGGCCGGACACTG +
Preference number: 5 (lower is better)
Translates to: PCGCCLGGMLRRPRL*MNCLERSWGPGRTL
Trigger: CAGTGTCCGGCCGGGACCCCAGGACCGCTCCAAGCAGTTCATGCACAGCCGTGGCCTCCGCAGCATCCCGCCCAGACAGCACCCACATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS-3UTR CAA 90 bp GTGGGCGAGTGTGACGTTCCCCCAGCTGGTCGCGGAGCTGACAGTGTGGGTGGTACGCGCTCAGTGCGCTaGGGCTGCCTCCCACTGCGC +
Preference number: 5 (lower is better)
Translates to: VGECDVPPAGRGADSVGGTRSVR*GCLPLR
Trigger: GCGCAGTGGGAGGCAGCCCAAGCGCACTGAGCGCGT...ACCACCCACACTGTCAGCTCCGCGACCAGCTGGGGGAACGTCACACTCGCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp GCCTCCCTGGGCCCCGTCACTGCCCAGTGTGGGGAACCCGGTGCCCGGCATGCGCGGGGCCAATACATTTaGAGGCACCAGGCGCCTCTA +
Preference number: 5 (lower is better)
Translates to: ASLGPVTAQCGEPGARHARGQYI*RHQAPL
Trigger: TAGAGGCGCCTGGTGCCTCAAAATGTATTGGCCCCG...CGCATGCCGGGCACCGGGTTCCCCACACTGGGCAGTGACGGGGCCCAGGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS TCA 90 bp CCAACGCCTCCGCAGCAGCCATCTTGCCAGAGGGCCGACGCCTTTTaGCTCTGGCGCCAACCCGTAGTGCGTGGTCGCCGCGAGGGGAGT +
Preference number: 5 (lower is better)
Translates to: PTPPQQPSCQRADAF*LWRQPVVRGRREGS
Trigger: ACTCCCCTCGCGGCGACCACGCACTACGGGTTGGCGCCAGAGTCAAAAGGCGTCGGCCCTCTGGCAAGATGGCTGCTGCGGAGGCGTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000370371.8
CDS GCA 90 bp AAGCAGACTGGGGGCCGCTTCTGGTCTCAGAAGCGCTTTCCACGCTaGCCTCGGAGGCTGTCTCGGCGTCTGTGGCGGGGCAGGACGTGG +
Preference number: 5 (lower is better)
Translates to: KQTGGRFWSQKRFPR*PRRLSRRLWRGRTW
Trigger: CCACGTCCTGCCCCGCCACAGACGCCGAGACAGCCTCCGAGGGCAGCGTGGAAAGCGCTTCTGAGACCAGAAGCGGCCCCCAGTCTGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 90 bp CTCATCCTCGGGGTCATAGGCCACCTCTTCCCGCTCGGCTGCAGCTaGTTCAGGAGCCCTTTCCACCTCGTGGCGCCGCCCTCGCTCCAC +
Preference number: 5 (lower is better)
Translates to: LILGVIGHLFPLGCS*FRSPFHLVAPPSLH
Trigger: GTGGAGCGAGGGCGGCGCCACGAGGTGGAAAGGGCTCCTGAAGCAGCTGCAGCCGAGCGGGAAGAGGTGGCCTATGACCCCGAGGATGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 90 bp GTCTCGGCGGGACCCTCCTCCCGGCGCTTCTTCCGCAGGCGACTCTaGATCCCTTTCAGGGGCCTCTCAGTGGGCTCCTGTTCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: VSAGPSSRRFFRRRL*IPFRGLSVGSCSRF
Trigger: GAAGCGGGAACAGGAGCCCACTGAGAGGCCCCTGAAAGGGATCCAGAGTCGCCTGCGGAAGAAGCGCCGGGAGGAGGGTCCCGCCGAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 90 bp CGGACGCCCGGCCCTGGGCGTCGGGCTCCTCCAGCGGCTTCTCTTTaGGCCCCACGTCAAACCGCTCTCTCTGCCTCCCTTCGAAAGTCT +
Preference number: 5 (lower is better)
Translates to: RTPGPGRRAPPAASL*APRQTALSASLRKS
Trigger: AGACTTTCGAAGGGAGGCAGAGAGAGCGGTTTGACGTGGGGCCCAAAGAGAAGCCGCTGGAGGAGCCCGACGCCCAGGGCCGGGCGTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGTGGGCAAGGACGACTTaGGTGGTGGAGACATCAAGG +
Preference number: 5 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKWARTT*VVETSR
Trigger: CCTTGATGTCTCCACCACCAAAGTCGTCCTTGCCCA...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGTCCCAGAAATGGGGCTaGCTCTGTCCCTTCAAACTG +
Preference number: 5 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRSQKWG*LCPFKL
Trigger: CAGTTTGAAGGGACAGAGCAAGCCCCATTTCTGGGA...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS TCA 90 bp TCAGGAGCCCTTTCCACCTCGTGGCGCCGCCCTCGCTCCACAAGCTaGGTGTCGAAGGCCCTCTCCGGGTCGTACTCCTCCTCAGGGTCG +
Preference number: 5 (lower is better)
Translates to: SGALSTSWRRPRSTS*VSKALSGSYSSSGS
Trigger: CGACCCTGAGGAGGAGTACGACCCGGAGAGGGCCTTCGACACTCAGCTTGTGGAGCGAGGGCGGCGCCACGAGGTGGAAAGGGCTCCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 90 bp GATGGTCTCATCCTCGGGGTCATAGGCCACCTCTTCCCGCTCGGCTaGAGCTGCTTCAGGAGCCCTTTCCACCTCGTGGCGCCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: DGLILGVIGHLFPLG*SCFRSPFHLVAPPS
Trigger: CGAGGGCGGCGCCACGAGGTGGAAAGGGCTCCTGAAGCAGCTGCAGCCGAGCGGGAAGAGGTGGCCTATGACCCCGAGGATGAGACCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 90 bp CAGAAGCGCTTTCCACGCTGCCCTCGGAGGCTGTCTCGGCGTCTGTaGCGGGGCAGGACGTGGGCTCACCAGAATCCTCCAGGGAGACAG +
Preference number: 5 (lower is better)
Translates to: QKRFPRCPRRLSRRL*RGRTWAHQNPPGRQ
Trigger: CTGTCTCCCTGGAGGATTCTGGTGAGCCCACGTCCTGCCCCGCCACAGACGCCGAGACAGCCTCCGAGGGCAGCGTGGAAAGCGCTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 90 bp CTGGCCTCCGAACTGGAAAGGCGCGCCGCCTCTGCTTCCCAGAAATaGGGCTTGCTCTGTCCCTTCAAACTGGGCGGGGGCGCCCGTCAC +
Preference number: 5 (lower is better)
Translates to: LASELERRAASASQK*GLLCPFKLGGGARH
Trigger: GTGACGGGCGCCCCCGCCCAGTTTGAAGGGACAGAGCAAGCCCCATTTCTGGGAAGCAGAGGCGGCGCGCCTTTCCAGTTCGGAGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGGAACTGACAGGTATCTaGGGTCAGGAGATGAGGATG +
Preference number: 5 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRELTGI*GQEMRM
Trigger: CATCCTCATCTCCTGACCCAAGATACCTGTCAGTTC...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCTGACAAATACCAGTTaGGGGCCGAGCGTACTTTTC +
Preference number: 5 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRLTNTS*GPSVLF
Trigger: GAAAAGTACGCTCGGCCCCAAACTGGTATTTGTCAG...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 90 bp AACTTCTTGGAGGCAGCCGTTGCCGCTGCAGGTGCCGGTCCGGCCTaGCTGGCAGCTGAAGCACCACTCGATGGGGTAGCGGAGAGCCAT +
Preference number: 5 (lower is better)
Translates to: NFLEAAVAAAGAGPA*LAAEAPLDGVAESH
Trigger: ATGGCTCTCCGCTACCCCATCGAGTGGTGCTTCAGCTGCCAGGCAGGCCGGACCGGCACCTGCAGCGGCAACGGCTGCCTCCAAGAAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 90 bp CAGCCTGGGACACAACCCCCTGATCGTTCTCGGGCTCCTGCTTACTaGGCAGGACGCCCTCCACAGTGTCACTGGCCTCGGAGCCCACAG +
Preference number: 5 (lower is better)
Translates to: QPGTQPPDRSRAPAY*AGRPPQCHWPRSPQ
Trigger: CTGTGGGCTCCGAGGCCAGTGACACTGTGGAGGGCGTCCTGCCCAGTAAGCAGGAGCCCGAGAACGATCAGGGGGTTGTGTCCCAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS-3UTR CAA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGAGTCTCATCCTGCACTaGCAGAATGGTGCAGTTTGG +
Preference number: 5 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKSLILH*QNGAVW
Trigger: CCAAACTGCACCATTCTGCAAGTGCAGGATGAGACT...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGCTGGGGGCCGTCTTCTaGCTTTCATTGTGCAGTTTA +
Preference number: 5 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKLGAVF*LSLCSL
Trigger: TAAACTGCACAATGAAAGCAAGAAGACGGCCCCCAG...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGTCCCCATGGGGATCCTaGCGTTCTTCAAATTGGGAT +
Preference number: 5 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKSPWGS*RSSNWD
Trigger: ATCCCAATTTGAAGAACGCAAGGATCCCCATGGGGA...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 90 bp CCGAACTGGAAAGGCGCGCCGCCTCTGCTTCCCAGAAATGGGGCTTaGTCTGTCCCTTCAAACTGGGCGGGGGCGCCCGTCACCTCGTTA +
Preference number: 5 (lower is better)
Translates to: PNWKGAPPLLPRNGA*SVPSNWAGAPVTSL
Trigger: TAACGAGGTGACGGGCGCCCCCGCCCAGTTTGAAGGGACAGAGCAAGCCCCATTTCTGGGAAGCAGAGGCGGCGCGCCTTTCCAGTTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 90 bp GACGACTTTGGTGGTGGAGACATCAAGGCGTCCGACACCGAGAAGTaGGCCATGGAGACCCCGACGGCGGCCCTCTGCTGCCTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: DDFGGGDIKASDTEK*AMETPTAALCCLRA
Trigger: AGCTCTCAGGCAGCAGAGGGCCGCCGTCGGGGTCTCCATGGCCCACTTCTCGGTGTCGGACGCCTTGATGTCTCCACCACCAAAGTCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGCTTTTCGTCCATCTaGTCTAACTCTCCACTGTTT +
Preference number: 5 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRRFSSI*SNSPLF
Trigger: AAACAGTGGAGAGTTAGACAAGATGGACGAAAAGCG...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 90 bp CGCCCACGACGGCGTGCTGCTCTCACAAGCTGCTTCCTTCCCGAGTaGTTCACTCCGCGCAGGGACCACCACTGCCTTCTTCACTGTGGT +
Preference number: 5 (lower is better)
Translates to: RPRRRAALTSCFLPE*FTPRRDHHCLLHCG
Trigger: ACCACAGTGAAGAAGGCAGTGGTGGTCCCTGCGCGGAGTGAAGCACTCGGGAAGGAAGCAGCTTGTGAGAGCAGCACGCCGTCGTGGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 90 bp GACACCGAGAAGTGGGCCATGGAGACCCCGACGGCGGCCCTCTGCTaGCTGAGAGCTTCTTCTTGCTCCTCCAGCTGTCTCTTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: DTEKWAMETPTAALC*LRASSCSSSCLFCS
Trigger: GGAGCAGAAGAGACAGCTGGAGGAGCAAGAAGAAGCTCTCAGGCAGCAGAGGGCCGCCGTCGGGGTCTCCATGGCCCACTTCTCGGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 90 bp CTGGTCGTTCCTTCACAGCTGTGGAAGCAGACTGGGGGCCGCTTCTaGTCTCAGAAGCGCTTTCCACGCTGCCCTCGGAGGCTGTCTCGG +
Preference number: 5 (lower is better)
Translates to: LVVPSQLWKQTGGRF*SQKRFPRCPRRLSR
Trigger: CCGAGACAGCCTCCGAGGGCAGCGTGGAAAGCGCTTCTGAGACCAGAAGCGGCCCCCAGTCTGCTTCCACAGCTGTGAAGGAACGACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 90 bp GAGGCTGGGCAGGGGGACAGGTCTTCCAGCGGGGAGGGCTCGGGATaGCCATCTCCTGGAGGCCCAGGGAAATACGTTCTGTCCACATTT +
Preference number: 5 (lower is better)
Translates to: EAGQGDRSSSGEGSG*PSPGGPGKYVLSTF
Trigger: AAATGTGGACAGAACGTATTTCCCTGGGCCTCCAGGAGATGGCCATCCCGAGCCCTCCCCGCTGGAAGACCTGTCCCCCTGCCCAGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS-3UTR CAA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAAGAGCCAGGGAACTTCTaGGAGGCAGCCGTTGCCGCT +
Preference number: 5 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQEPGNF*EAAVAA
Trigger: AGCGGCAACGGCTGCCTCCAAGAAGTTCCCTGGCTC...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp CTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTGCACCAGCCCAGCCCTCCTaGTCCCGGTGCCATCCGGGA +
Preference number: 5 (lower is better)
Translates to: LQRAVFPPALYLGRTDCAPAQPS*SRCHPG
Trigger: TCCCGGATGGCACCGGGACAAGGAGGGCTGGGCTGG...TGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp GGGCCGGGCTTTTCCTCTCCCTGGTCACGTGGAGCTGGCCAGAGCTCTTCACAAAAGTCCCTGGGGCTTTaGTGTGTCCCCGTCAGGCGG +
Preference number: 5 (lower is better)
Translates to: GPGFSSPWSRGAGQSSSQKSLGL*CVPVRR
Trigger: CCGCCTGACGGGGACACACAAAAGCCCCAGGGACTT...TTGTGAAGAGCTCTGGCCAGCTCCACGTGACCAGGGAGAGGAAAAGCCCGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS GCA 90 bp GTAATTGTGATCGCTCGCCCACGACGGCGTGCTGCTCTCACAAGCTaGTTCCTTCCCGAGTGCTTCACTCCGCGCAGGGACCACCACTGC +
Preference number: 5 (lower is better)
Translates to: VIVIARPRRRAALTS*FLPECFTPRRDHHC
Trigger: GCAGTGGTGGTCCCTGCGCGGAGTGAAGCACTCGGGAAGGAAGCAGCTTGTGAGAGCAGCACGCCGTCGTGGGCGAGCGATCACAATTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 90 bp TCAAGACAGGCTTCGGCACATCCTGTCTGGCTTCCACCATGTGGGTaGTGTCTGGGCGGGATGCTGCGGAGGCCACGGCTGTGCATGAAC +
Preference number: 5 (lower is better)
Translates to: SRQASAHPVWLPPCG*CLGGMLRRPRLCMN
Trigger: GTTCATGCACAGCCGTGGCCTCCGCAGCATCCCGCCCAGACAGCACCCACATGGTGGAAGCCAGACAGGATGTGCCGAAGCCTGTCTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 90 bp AGATTTCTTGGGTCCTCATACTGGGCTGAGCCGAGAGCCTTGTCCTaGGACGCGAACCCCGGGCAGGTGAAAGGGTCCCTCTCACCGTCG +
Preference number: 5 (lower is better)
Translates to: RFLGSSYWAEPRALS*DANPGQVKGSLSPS
Trigger: CGACGGTGAGAGGGACCCTTTCACCTGCCCGGGGTTCGCGTCGCAGGACAAGGCTCTCGGCTCAGCCCAGTATGAGGACCCAAGAAATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 90 bp TGGCTGCGATGGTGCAGCACTCATAGCCCCAAGGCGTCCTGGGGCTaGCGAGGCCATTGGAACAGAAGGTACCACTGGCTTCCTTACGGC +
Preference number: 5 (lower is better)
Translates to: WLRWCSTHSPKASWG*RGHWNRRYHWLPYG
Trigger: GCCGTAAGGAAGCCAGTGGTACCTTCTGTTCCAATGGCCTCGCCAGCCCCAGGACGCCTTGGGGCTATGAGTGCTGCACCATCGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 90 bp GAAGTCAAGACAGGCTTCGGCACATCCTGTCTGGCTTCCACCATGTaGGTGCTGTCTGGGCGGGATGCTGCGGAGGCCACGGCTGTGCAT +
Preference number: 5 (lower is better)
Translates to: EVKTGFGTSCLASTM*VLSGRDAAEATAVH
Trigger: ATGCACAGCCGTGGCCTCCGCAGCATCCCGCCCAGACAGCACCCACATGGTGGAAGCCAGACAGGATGTGCCGAAGCCTGTCTTGACTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 90 bp GATGGGCCCCTTCTGGGCTCCGAATCTGGCTGGCGGAGGCCCTCGTaGCCCATCGTTAGAAGCGATATTCTCTTCTGGAAACGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: DGPLLGSESGWRRPS*PIVRSDILFWKRRG
Trigger: GCCCCTCCGTTTCCAGAAGAGAATATCGCTTCTAACGATGGGCCACGAGGGCCTCCGCCAGCCAGATTCGGAGCCCAGAAGGGGCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 90 bp AGGTGCAGGTGGGCCTCACCTCCACCCAGAAAGCCGGCGCTTACCTaGTCCCTCAAAGGGCAAGAGTTTGGATGGAACAGGGTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: RCRWASPPPRKPALT*SLKGQEFGWNRVLG
Trigger: GCCCAGGACCCTGTTCCATCCAAACTCTTGCCCTTTGAGGGACCAGGTAAGCGCCGGCTTTCTGGGTGGAGGTGAGGCCCACCTGCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp CTGACCAGTGGGTCTTCACAGGTGCGGAGAGGCCAGCTTCTCGGTCTTCACCTCCCTGCGCCCTCTCGCTaGGCGATAGTGGTCCTTCGA +
Preference number: 5 (lower is better)
Translates to: LTSGSSQVRRGQLLGLHLPAPSR*AIVVLR
Trigger: TCGAAGGACCACTATCGCCAAGCGAGAGGGCGCAGG...GAGGTGAAGACCGAGAAGCTGGCCTCTCCGCACCTGTGAAGACCCACTGGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp TACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCACGCGCTCAGTGCGCTaGGGCTGCCTCCCACTGCGC +
Preference number: 5 (lower is better)
Translates to: YSAVVRTTHVQTGVDVACTRSVR*GCLPLR
Trigger: GCGCAGTGGGAGGCAGCCCAAGCGCACTGAGCGCGT...GCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp CAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGCGGCTAAGATCTTGAGTTTCTTCTaGCCACTTGGATTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: QGGRLQVTPTPASGAAAKILSFF*PLGFAA
Trigger: AGCTGCAAATCCAAGTGGCAAGAAGAAACTCAAGAT...CTTAGCCGCCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCCGGGGCCAATACATTTaGAGGCACCAGGCGCCTCTA +
Preference number: 5 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTRGQYI*RHQAPL
Trigger: TAGAGGCGCCTGGTGCCTCAAAATGTATTGGCCCCG...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTGCACTAGGTGCAGGCTGCTaGCCCACCGCGGAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: LQRAVFPPALYLGRTDCALGAGC*PTAEPG
Trigger: TCCAGGCTCCGCGGTGGGCAAGCAGCCTGCACCTAG...TGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp CGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGGCCTCCGGGGCGGTTAACCTATGGACACTaGGCTTTCAACACCAAACAT +
Preference number: 5 (lower is better)
Translates to: RSRRVDACRSRPHRPPGRLTYGH*AFNTKH
Trigger: ATGTTTGGTGTTGAAAGCCAAGTGTCCATAGGTTAA...CCGCCCCGGAGGCCGGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 90 bp TGCCCACCGCGGAGCCTGGAGGGGCTGTTTTCTTTGAGGCTGCCATaGCTGCCGCTTTCTCCTCGGACCTCCTGTCTTCCTTCGTGGATT +
Preference number: 5 (lower is better)
Translates to: CPPRSLEGLFSLRLP*LPLSPRTSCLPSWI
Trigger: AATCCACGAAGGAAGACAGGAGGTCCGAGGAGAAAGCGGCAGCCATGGCAGCCTCAAAGAAAACAGCCCCTCCAGGCTCCGCGGTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 90 bp AAGGCGTCCTGGGGCTGGCGAGGCCATTGGAACAGAAGGTACCACTaGCTTCCTTACGGCTCCCACCAAAGCAGCGGAGCCAGGGAACTT +
Preference number: 5 (lower is better)
Translates to: KASWGWRGHWNRRYH*LPYGSHQSSGAREL
Trigger: AAGTTCCCTGGCTCCGCTGCTTTGGTGGGAGCCGTAAGGAAGCCAGTGGTACCTTCTGTTCCAATGGCCTCGCCAGCCCCAGGACGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 90 bp TGCAGCACTCATAGCCCCAAGGCGTCCTGGGGCTGGCGAGGCCATTaGAACAGAAGGTACCACTGGCTTCCTTACGGCTCCCACCAAAGC +
Preference number: 5 (lower is better)
Translates to: CSTHSPKASWGWRGH*NRRYHWLPYGSHQS
Trigger: GCTTTGGTGGGAGCCGTAAGGAAGCCAGTGGTACCTTCTGTTCCAATGGCCTCGCCAGCCCCAGGACGCCTTGGGGCTATGAGTGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 90 bp TGGGCACCATCACAGAAGTCAAGACAGGCTTCGGCACATCCTGTCTaGCTTCCACCATGTGGGTGCTGTCTGGGCGGGATGCTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: WAPSQKSRQASAHPV*LPPCGCCLGGMLRR
Trigger: CCTCCGCAGCATCCCGCCCAGACAGCACCCACATGGTGGAAGCCAGACAGGATGTGCCGAAGCCTGTCTTGACTTCTGTGATGGTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 90 bp CGACCCAGGAGGTGTGGTGCTGACAGCCGCGTCTGCAGAGCAGAGTaGATACTTGGAGGGCTTCTTTTCCGACTGCGGGACTGTGGCTAC +
Preference number: 5 (lower is better)
Translates to: RPRRCGADSRVCRAE*ILGGLLFRLRDCGY
Trigger: GTAGCCACAGTCCCGCAGTCGGAAAAGAAGCCCTCCAAGTATCCACTCTGCTCTGCAGACGCGGCTGTCAGCACCACACCTCCTGGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCTCTTTGCTGGTGGGTTaGATGGCCTTAGGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTSLLVG*MALGAS
Trigger: GGAGGCACCTAAGGCCATCAAACCCACCAGCAAAGA...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGCCTGCGCCCTCTCGCTaGGCGATAGTGGTCCTTCGA +
Preference number: 5 (lower is better)
Translates to: GGCGVPGSVAMQSDWDEEPAPSR*AIVVLR
Trigger: TCGAAGGACCACTATCGCCAAGCGAGAGGGCGCAGG...CTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp TGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGCCTGCGCCCTCTCGCTaGGCGATAGTGGTCCTTCGA +
Preference number: 5 (lower is better)
Translates to: CQNNSCADRGGCGVPGSVPAPSR*AIVVLR
Trigger: TCGAAGGACCACTATCGCCAAGCGAGAGGGCGCAGG...CACACTGCCCGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp CTGACCAGTGGGTCTTCACAGGTGCGGAGAGGCCAGCTTCTCGGTCTTCACCTCGGGCTGGCGAGGCCATaGGAACAGAAGGTACCACTG +
Preference number: 5 (lower is better)
Translates to: LTSGSSQVRRGQLLGLHLGLARP*EQKVPL
Trigger: CAGTGGTACCTTCTGTTCCAATGGCCTCGCCAGCCC...GAGGTGAAGACCGAGAAGCTGGCCTCTCCGCACCTGTGAAGACCCACTGGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp GACAGGGGAAACATGCCAGGACCTAGCCTTACACACACACACGCGCGCACATGCCTGTGCATGAACTGCTaGGAGCGGTCCTGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: DRGNMPGPSLTHTHARTCLCMNC*ERSWGP
Trigger: GGGACCCCAGGACCGCTCCAAGCAGTTCATGCACAG...GCATGTGCGCGCGTGTGTGTGTGTAAGGCTAGGTCCTGGCATGTTTCCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS TCA 90 bp AAATTGGGATGGTGCCACTCCTCGTGGTCCACCAAGGTAAGAGGGTaGGGGGCCTCTGCTGTCCCCATAAGGAGGTGGCCCATGTTGCCC +
Preference number: 5 (lower is better)
Translates to: KLGWCHSSWSTKVRG*GASAVPIRRWPMLP
Trigger: GGGCAACATGGGCCACCTCCTTATGGGGACAGCAGAGGCCCCTCACCCTCTTACCTTGGTGGACCACGAGGAGTGGCACCATCCCAATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 90 bp TATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTaGCCGGCCGGGGCGTCTAGGCCTGCGAGGCGGTGCCAGCGTCGG +
Preference number: 5 (lower is better)
Translates to: YLFNASYERGFKKGL*PAGASRPARRCQRR
Trigger: CCGACGCTGGCACCGCCTCGCAGGCCTAGACGCCCCGGCCGGGCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 90 bp GCTTCTTCCGCAGGCGACTCTGGATCCCTTTCAGGGGCCTCTCAGTaGGCTCCTGTTCCCGCTTCCTGCGAAGGCGATTCTGAAGCTCTT +
Preference number: 5 (lower is better)
Translates to: ASSAGDSGSLSGASQ*APVPASCEGDSEAL
Trigger: AAGAGCTTCAGAATCGCCTTCGCAGGAAGCGGGAACAGGAGCCCACTGAGAGGCCCCTGAAAGGGATCCAGAGTCGCCTGCGGAAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS-3UTR CAA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAGAGGGCCGACGCCTTTaGACTCTGGCGCCAACCCGT +
Preference number: 5 (lower is better)
Translates to: VWGRAYFSRDTEELLRRREGRRL*TLAPTR
Trigger: ACGGGTTGGCGCCAGAGTCAAAAGGCGTCGGCCCTC...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266070.8
CDS-3UTR CAA 90 bp GAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGACGCGCTCAGTGCGCTaGGGCTGCCTCCCACTGCGC +
Preference number: 5 (lower is better)
Translates to: EAYTALLSEQLMCRQGWMTRSVR*GCLPLR
Trigger: GCGCAGTGGGAGGCAGCCCAAGCGCACTGAGCGCGT...CATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp CAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGGTGTGTAGCGTGTACGCGCTCAGTGCGCTaGGGCTGCCTCCCACTGCGC +
Preference number: 5 (lower is better)
Translates to: QECVAFEVRMCSCGCVACTRSVR*GCLPLR
Trigger: GCGCAGTGGGAGGCAGCCCAAGCGCACTGAGCGCGT...ACACGCTACACACCCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGATCTTGGAGGCAGCCGTaGCCGCTGCAGGTGCCGGTC +
Preference number: 5 (lower is better)
Translates to: AERTFPGIQKNCSEGETGSWRQP*PLQVPV
Trigger: GACCGGCACCTGCAGCGGCAACGGCTGCCTCCAAGA...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGATCCCGGCTGGAGTCCTaGTCCCGGTGTCGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: AERTFPGIQKNCSEGETGSRLES*SRCRSH
Trigger: GTGGGACCGACACCGGGACAAGGACTCCAGCCGGGA...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS TCA 90 bp GGCCTCTCAGTGGGCTCCTGTTCCCGCTTCCTGCGAAGGCGATTCTaGAGCTCTTTCAAGGTCAGGCCATCGCTGTCACTATCGGAGGTG +
Preference number: 5 (lower is better)
Translates to: GLSVGSCSRFLRRRF*SSFKVRPSLSLSEV
Trigger: CACCTCCGATAGTGACAGCGATGGCCTGACCTTGAAAGAGCTTCAGAATCGCCTTCGCAGGAAGCGGGAACAGGAGCCCACTGAGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS TCA 90 bp AGAGGTGTGCGCGGTGCTGACTGGTGGTGTCTTTCAACATGCTGCTaGAGACGTCGAGAAGCGGCGCTGTGCTCTTCTCAGGGACAGCAC +
Preference number: 5 (lower is better)
Translates to: RGVRGADWWCLSTCC*RRREAALCSSQGQH
Trigger: GTGCTGTCCCTGAGAAGAGCACAGCGCCGCTTCTCGACGTCTTCAGCAGCATGTTGAAAGACACCACCAGTCAGCACCGCGCACACCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 90 bp TTTTCAGAAGAGGCTGGTCGTTCCTTCACAGCTGTGGAAGCAGACTaGGGGCCGCTTCTGGTCTCAGAAGCGCTTTCCACGCTGCCCTCG +
Preference number: 5 (lower is better)
Translates to: FSEEAGRSFTAVEAD*GPLLVSEALSTLPS
Trigger: CGAGGGCAGCGTGGAAAGCGCTTCTGAGACCAGAAGCGGCCCCCAGTCTGCTTCCACAGCTGTGAAGGAACGACCAGCCTCTTCTGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 90 bp GTTCCTCTGAATCCGACACTGGCGGAGAGTCCTCCAGATCGGGGATaGCCTCCTGCCTGGGGGCCGTCTTCTTGCTTTCATTGTGCAGTT +
Preference number: 5 (lower is better)
Translates to: VPLNPTLAESPPDRG*PPAWGPSSCFHCAV
Trigger: AACTGCACAATGAAAGCAAGAAGACGGCCCCCAGGCAGGAGGCCATCCCCGATCTGGAGGACTCTCCGCCAGTGTCGGATTCAGAGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 90 bp TTCCAAAGAGAGTCTGCAGGATGTGCTCCAGCGGTGATGCTGTTTTaGAAGCAGACGAAGCGGTGGAGGAAGCTGCCGTGGAGGCTGCCG +
Preference number: 5 (lower is better)
Translates to: FQRESAGCAPAVMLF*KQTKRWRKLPWRLP
Trigger: CGGCAGCCTCCACGGCAGCTTCCTCCACCGCTTCGTCTGCTTCCAAAACAGCATCACCGCTGGAGCACATCCTGCAGACTCTCTTTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 90 bp CGGGCTTGTCTGCAGACTGCTGCTCTTGCTGGAACAGCTCTGCCTTaGGCAAGGACGACTTTGGTGGTGGAGACATCAAGGCGTCCGACA +
Preference number: 5 (lower is better)
Translates to: RACLQTAALAGTALP*ARTTLVVETSRRPT
Trigger: TGTCGGACGCCTTGATGTCTCCACCACCAAAGTCGTCCTTGCCCAAGGCAGAGCTGTTCCAGCAAGAGCAGCAGTCTGCAGACAAGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 90 bp AACCGCTCTCTCTGCCTCCCTTCGAAAGTCTGGTTTCTGTATTCGTaGCCTTTCCCCTCTCGGAAGTCGGCCGATGCCCACTGTCCGTCG +
Preference number: 5 (lower is better)
Translates to: NRSLCLPSKVWFLYS*PFPSRKSADAHCPS
Trigger: CGACGGACAGTGGGCATCGGCCGACTTCCGAGAGGGGAAAGGCCACGAATACAGAAACCAGACTTTCGAAGGGAGGCAGAGAGAGCGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGTTGCTCGGGTCGCCTTaGTCGTCCATACCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: CQNNSCADRGGCGVPGSVLLGSP*SSIPAP
Trigger: TGGAGCAGGTATGGACGACAAAGGCGACCCGAGCAA...CACACTGCCCGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp TGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGTTAGGTGCCTCCTCATaGCTCGGGTCGCCTTTGTCG +
Preference number: 5 (lower is better)
Translates to: CQNNSCADRGGCGVPGSVLGASS*LGSPLS
Trigger: CGACAAAGGCGACCCGAGCAATGAGGAGGCACCTAA...CACACTGCCCGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp TCCTGGACATGGGCTCTGCTTCCCGCTGATGGTGCAGCCGGTGTCTGTGATCAGTCTTTGCTGGTGGGTTaGATGGCCTTAGGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: SWTWALLPADGAAGVCDQSLLVG*MALGAS
Trigger: GGAGGCACCTAAGGCCATCAAACCCACCAGCAAAGA...CTGATCACAGACACCGGCTGCACCATCAGCGGGAAGCAGAGCCCATGTCCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCGTTTTCCTGAACTCTTaGCTGGTGGGTTTGATGGCC +
Preference number: 5 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTVFLNS*LVGLMA
Trigger: GGCCATCAAACCCACCAGCAAAGAGTTCAGGAAAAC...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGACCTGCGCCCTCTCGCTaGGCGATAGTGGTCCTTCGA +
Preference number: 5 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRPAPSR*AIVVLR
Trigger: TCGAAGGACCACTATCGCCAAGCGAGAGGGCGCAGG...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACAACGCGCTCAGTGCGCTaGGGCTGCCTCCCACTGCGC +
Preference number: 5 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTTRSVR*GCLPLR
Trigger: GCGCAGTGGGAGGCAGCCCAAGCGCACTGAGCGCGT...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CTGTCCAAGGGCTTCTGGGCTATCTCCGTGAGGACAGGGTCCGCTGAGACAGGGGTCGCTGCGGCGTGTTaGAGGATACAGTCATTACTG +
Preference number: 5 (lower is better)
Translates to: LSKGFWAISVRTGSAETGVAAAC*RIQSLL
Trigger: CAGTAATGACTGTATCCTCAAACACGCCGCAGCGAC...CCCTGTCTCAGCGGACCCTGTCCTCACGGAGATAGCCCAGAAGCCCTTGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAACTGCGGTCCCACTCCTaGCCCCGGTCGGCCTCGCGC +
Preference number: 5 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKLRSHS*PRSASR
Trigger: GCGCGAGGCCGACCGGGGCAAGGAGTGGGACCGCAG...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCCTCTTGCTCCGGTCCTaGCGGTCGCGGCCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: QLPVSFAVLELVITSSRLLLLRS*RSRPRS
Trigger: GGAGCGGGGCCGCGACCGCAAGGACCGGAGCAAGAG...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS TCA 90 bp AACTTACTCTCTCTGTCATCTTTCCCAGCCTGGGACACAACCCCCTaGTCGTTCTCGGGCTCCTGCTTACTGGGCAGGACGCCCTCCACA +
Preference number: 5 (lower is better)
Translates to: NLLSLSSFPAWDTTP*SFSGSCLLGRTPST
Trigger: TGTGGAGGGCGTCCTGCCCAGTAAGCAGGAGCCCGAGAACGATCAGGGGGTTGTGTCCCAGGCTGGGAAAGATGACAGAGAGAGTAAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 90 bp GCTTTACTGCATTGTAATTGTGATCGCTCGCCCACGACGGCGTGCTaGTCTCACAAGCTGCTTCCTTCCCGAGTGCTTCACTCCGCGCAG +
Preference number: 5 (lower is better)
Translates to: ALLHCNCDRSPTTAC*SHKLLPSRVLHSAQ
Trigger: CTGCGCGGAGTGAAGCACTCGGGAAGGAAGCAGCTTGTGAGAGCAGCACGCCGTCGTGGGCGAGCGATCACAATTACAATGCAGTAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 90 bp CTGGCTTTACTGCATTGTAATTGTGATCGCTCGCCCACGACGGCGTaGTGCTCTCACAAGCTGCTTCCTTCCCGAGTGCTTCACTCCGCG +
Preference number: 5 (lower is better)
Translates to: LALLHCNCDRSPTTA*CSHKLLPSRVLHSA
Trigger: CGCGGAGTGAAGCACTCGGGAAGGAAGCAGCTTGTGAGAGCAGCACGCCGTCGTGGGCGAGCGATCACAATTACAATGCAGTAAAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 90 bp GAATCCGACACTGGCGGAGAGTCCTCCAGATCGGGGATGGCCTCCTaGCTGGGGGCCGTCTTCTTGCTTTCATTGTGCAGTTTAGTTCTG +
Preference number: 5 (lower is better)
Translates to: ESDTGGESSRSGMAS*LGAVFLLSLCSLVL
Trigger: CAGAACTAAACTGCACAATGAAAGCAAGAAGACGGCCCCCAGGCAGGAGGCCATCCCCGATCTGGAGGACTCTCCGCCAGTGTCGGATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 90 bp CCGCTGATGGTGCAGCCGGTGTCTGTGATCAGCTTAACACAAAGCTaGAACTCCCAGTCCTGGACAGGCCCAGGGGATGGCTATCCAGAA +
Preference number: 5 (lower is better)
Translates to: PLMVQPVSVISLTQS*NSQSWTGPGDGYPE
Trigger: TTCTGGATAGCCATCCCCTGGGCCTGTCCAGGACTGGGAGTTGCAGCTTTGTGTTAAGCTGATCACAGACACCGGCTGCACCATCAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS CCA 90 bp TTGGGCCCCACGTCAAACCGCTCTCTCTGCCTCCCTTCGAAAGTCTaGTTTCTGTATTCGTGGCCTTTCCCCTCTCGGAAGTCGGCCGAT +
Preference number: 5 (lower is better)
Translates to: LGPTSNRSLCLPSKV*FLYSWPFPSRKSAD
Trigger: ATCGGCCGACTTCCGAGAGGGGAAAGGCCACGAATACAGAAACCAGACTTTCGAAGGGAGGCAGAGAGAGCGGTTTGACGTGGGGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 90 bp CCGGTGTCTGTGATCAGCTTAACACAAAGCTGCAACTCCCAGTCCTaGACAGGCCCAGGGGATGGCTATCCAGAAAGAACGGGAGGGGTC +
Preference number: 5 (lower is better)
Translates to: PVSVISLTQSCNSQS*TGPGDGYPERTGGV
Trigger: GACCCCTCCCGTTCTTTCTGGATAGCCATCCCCTGGGCCTGTCCAGGACTGGGAGTTGCAGCTTTGTGTTAAGCTGATCACAGACACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp GACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGAGGGCCGACGCCTTTaGACTCTGGCGCCAACCCGT +
Preference number: 5 (lower is better)
Translates to: DSVLGVNSLTVGPMKQECEGRRL*TLAPTR
Trigger: ACGGGTTGGCGCCAGAGTCAAAAGGCGTCGGCCCTC...ACACTCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370371.8
CDS-3UTR CAA 90 bp GCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGCAGAATGGTGCAGTTaGGGCAGATATAGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: ADRGGCGVPGSVAMQSDWAEWCS*GRYSLP
Trigger: GGGAAGACTATATCTGCCCAAACTGCACCATTCTGC...CCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp GCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGAGTCTCATCCTGCACTaGCAGAATGGTGCAGTTTGG +
Preference number: 5 (lower is better)
Translates to: ADRGGCGVPGSVAMQSDWSLILH*QNGAVW
Trigger: CCAAACTGCACCATTCTGCAAGTGCAGGATGAGACT...CCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp ACCCTACAACCGTGCTCACCTGACAGCTCCAAGTTTGGAGATGAGCAGGGAGAGGAGGGGCTGTTTTCTTaGAGGCTGCCATGGCTGCCG +
Preference number: 5 (lower is better)
Translates to: TLQPCSPDSSKFGDEQGEEGLFS*RLPWLP
Trigger: CGGCAGCCATGGCAGCCTCAAAGAAAACAGCCCCTC...CTCTCCCTGCTCATCTCCAAACTTGGAGCTGTCAGGTGAGCACGGTTGTAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp CAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTGAGGGTGCTGCGGGGCTGGGGGCCGTCTTCTaGCTTTCATTGTGCAGTTTA +
Preference number: 5 (lower is better)
Translates to: QGDPATAVNCMAPEGAAGLGAVF*LSLCSL
Trigger: TAAACTGCACAATGAAAGCAAGAAGACGGCCCCCAG...CCCCGCAGCACCCTCAGGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp ACTAAGACTTCTCCCGTAGCCGCAGGGTGGACGCCTGCAGGTCACGCCCACACCTGCTCCTCGATCTGTTaGTTCAGCTCTTCTAGCATC +
Preference number: 5 (lower is better)
Translates to: TKTSPVAAGWTPAGHAHTCSSIC*FSSSSI
Trigger: GATGCTAGAAGAGCTGAACAAACAGATCGAGGAGCA...GGTGTGGGCGTGACCTGCAGGCGTCCACCCTGCGGCTACGGGAGAAGTCTTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAGGCAGTGAGGCGGGCTaGTCTGCAGACTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEGSEAG*SADCCS
Trigger: AGAGCAGCAGTCTGCAGACAAGCCCGCCTCACTGCC...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGATCCAGCGGCTTCTCTTaGGGCCCCACGTCAAACCGC +
Preference number: 5 (lower is better)
Translates to: AERTFPGIQKNCSEGETGSSGFS*GPTSNR
Trigger: GCGGTTTGACGTGGGGCCCAAAGAGAAGCCGCTGGA...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GTTTCCCCTGAGGGCACAGCTGGGCACCTTCAGGCCTTCACTTGCTTAAGTGTGCCTCCTGCCCTGTACTaGGGGAGAACAGACTGTGCA +
Preference number: 5 (lower is better)
Translates to: VSPEGTAGHLQAFTCLSVPPALY*GRTDCA
Trigger: TGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGG...CACACTTAAGCAAGTGAAGGCCTGAAGGTGCCCAGCTGTGCCCTCAGGGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS GCA 90 bp TCGGGGATGGCCTCCTGCCTGGGGGCCGTCTTCTTGCTTTCATTGTaGAGTTTAGTTCTGGACTCCATCACAGATCTCGCTGGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: SGMASCLGAVFLLSL*SLVLDSITDLAGLS
Trigger: AGAGAGGCCAGCGAGATCTGTGATGGAGTCCAGAACTAAACTGCACAATGAAAGCAAGAAGACGGCCCCCAGGCAGGAGGCCATCCCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 90 bp ATACTTGGAGGGCTTCTTTTCCGACTGCGGGACTGTGGCTACTTTTaGATAGGCCGGAACGTCCGCTTCTTCCGGTTGAAGTCGGGTCCG +
Preference number: 5 (lower is better)
Translates to: ILGGLLFRLRDCGYF*IGRNVRFFRLKSGP
Trigger: CGGACCCGACTTCAACCGGAAGAAGCGGACGTTCCGGCCTATCCAAAAGTAGCCACAGTCCCGCAGTCGGAAAAGAAGCCCTCCAAGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 90 bp GTCACCTCGTTATACGGGGCGTCCTGGAACTCCCTCTTCTCCCCATaGGGATCCTTGCGTTCTTCAAATTGGGATGGTGCCACTCCTCGT +
Preference number: 5 (lower is better)
Translates to: VTSLYGASWNSLFSP*GSLRSSNWDGATPR
Trigger: ACGAGGAGTGGCACCATCCCAATTTGAAGAACGCAAGGATCCCCATGGGGAGAAGAGGGAGTTCCAGGACGCCCCGTATAACGAGGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 90 bp GACCCTCTGGTCTTCGAACTGCTGAGGCTGAATGCCCCTGGGACCTaGCATAAAGTTAGGCGCTTGGCCTCTGGGTCCTTCAAACTGGTT +
Preference number: 5 (lower is better)
Translates to: DPLVFELLRLNAPGT*HKVRRLASGSFKLV
Trigger: AACCAGTTTGAAGGACCCAGAGGCCAAGCGCCTAACTTTATGCCAGGTCCCAGGGGCATTCAGCCTCAGCAGTTCGAAGACCAGAGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp ACCCTACAACCGTGCTCACCTGACAGCTCCAAGTTTGGAGATGAGCAGGGAGAGTTGCTCGGGTCGCCTTaGTCGTCCATACCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: TLQPCSPDSSKFGDEQGELLGSP*SSIPAP
Trigger: TGGAGCAGGTATGGACGACAAAGGCGACCCGAGCAA...CTCTCCCTGCTCATCTCCAAACTTGGAGCTGTCAGGTGAGCACGGTTGTAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp TCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGACCTGCGCCCTCTCGCTaGGCGATAGTGGTCCTTCGA +
Preference number: 5 (lower is better)
Translates to: SGQCSRCELTYRGAYEAGPAPSR*AIVVLR
Trigger: TCGAAGGACCACTATCGCCAAGCGAGAGGGCGCAGG...TCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp GCGTCCTGCGGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTGTCGCTGCGGCGTGTTaGAGGATACAGTCATTACTG +
Preference number: 5 (lower is better)
Translates to: ASCGQDSVLGVNSLTVGPVAAAC*RIQSLL
Trigger: CAGTAATGACTGTATCCTCAAACACGCCGCAGCGAC...AGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACCGCAGGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAGAGGGGCTGTTTTCTTaGAGGCTGCCATGGCTGCCG +
Preference number: 5 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEEGLFS*RLPWLP
Trigger: CGGCAGCCATGGCAGCCTCAAAGAAAACAGCCCCTC...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAGAGAGCCATGGCCTCTaGGGGATGGTGCCCTTGAAA +
Preference number: 5 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRESHGL*GMVPLK
Trigger: TTTCAAGGGCACCATCCCCAAGAGGCCATGGCTCTC...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAGGGCTGGCGAGGCCATaGGAACAGAAGGTACCACTG +
Preference number: 5 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEGLARP*EQKVPL
Trigger: CAGTGGTACCTTCTGTTCCAATGGCCTCGCCAGCCC...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGAGGGCTGGCGAGGCCATaGGAACAGAAGGTACCACTG +
Preference number: 5 (lower is better)
Translates to: AERTFPGIQKNCSEGETGGLARP*EQKVPL
Trigger: CAGTGGTACCTTCTGTTCCAATGGCCTCGCCAGCCC...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CTGTCCAAGGGCTTCTGGGCTATCTCCGTGAGGACAGGGTCCGCTGAGACAGGGTTAGCTAGTATGGACTaGGGCACCATCACAGAAGTC +
Preference number: 5 (lower is better)
Translates to: LSKGFWAISVRTGSAETGLASMD*GTITEV
Trigger: GACTTCTGTGATGGTGCCCAAGTCCATACTAGCTAA...CCCTGTCTCAGCGGACCCTGTCCTCACGGAGATAGCCCAGAAGCCCTTGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACATCCCTGTCCCTGGCCTaGTCTCGGTCCCGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTSLSLA*SRSRSL
Trigger: CAGAGAGCGGGACCGAGACAAGGCCAGGGACAGGGA...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS TCA 90 bp GGCTTCGGTCGGCCCAAGTCTCCAGGCTCCTCATCTTTGATGTCCTaGGCCGCCTTTCCCTCCAACTTACTCTCTCTGTCATCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: GFGRPKSPGSSSLMS*AAFPSNLLSLSSFP
Trigger: TGGGAAAGATGACAGAGAGAGTAAGTTGGAGGGAAAGGCGGCTCAGGACATCAAAGATGAGGAGCCTGGAGACTTGGGCCGACCGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS TCA 90 bp GGCCTGTCGTCCTCCTCTTCCTCTAGAGCCTTATCTTTTGAGAACTaGCCGAACTGCTGGACGATCGGATCTAACAACGGAGGTGCCGGC +
Preference number: 5 (lower is better)
Translates to: GLSSSSSSRALSFEN*PNCWTIGSNNGGAG
Trigger: GCCGGCACCTCCGTTGTTAGATCCGATCGTCCAGCAGTTCGGTCAGTTCTCAAAAGATAAGGCTCTAGAGGAAGAGGAGGACGACAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS TCA 90 bp AAACTGCAGGGGTGCAGGCGCCCTTTGGTTTGTGAATCTTGGTGGTaGATGGACCCTCTGGTCTTCGAACTGCTGAGGCTGAATGCCCCT +
Preference number: 5 (lower is better)
Translates to: KLQGCRRPLVCESWW*MDPLVFELLRLNAP
Trigger: AGGGGCATTCAGCCTCAGCAGTTCGAAGACCAGAGGGTCCATTCACCACCAAGATTCACAAACCAAAGGGCGCCTGCACCCCTGCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 90 bp TCCTGTTGGGCAGGTCATCAACAGTCACTTTCGCTTCTTCTAAGATaGTCTCATCCTCGGGGTCATAGGCCACCTCTTCCCGCTCGGCTG +
Preference number: 5 (lower is better)
Translates to: SCWAGHQQSLSLLLR*SHPRGHRPPLPARL
Trigger: CAGCCGAGCGGGAAGAGGTGGCCTATGACCCCGAGGATGAGACCATCTTAGAAGAAGCGAAAGTGACTGTTGATGACCTGCCCAACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTTCCGCAGCAGCCATCTaGCCAGAGGGCCGACGCCTT +
Preference number: 5 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCSAAAI*PEGRRL
Trigger: AAGGCGTCGGCCCTCTGGCAAGATGGCTGCTGCGGA...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266070.8
CDS-3UTR CAA 90 bp ATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGTTGCTCGGGTCGCCTTaGTCGTCCATACCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: IQRCCQNNSCADRGGCGVLLGSP*SSIPAP
Trigger: TGGAGCAGGTATGGACGACAAAGGCGACCCGAGCAA...CACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp GATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATATTGCTCGGGTCGCCTTaGTCGTCCATACCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: DVACRAVWLCNQTGMKRILLGSP*SSIPAP
Trigger: TGGAGCAGGTATGGACGACAAAGGCGACCCGAGCAA...TATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAATTAGGTGCCTCCTCATaGCTCGGGTCGCCTTTGTCG +
Preference number: 5 (lower is better)
Translates to: FGAERTFPGIQKNCSEGELGASS*LGSPLS
Trigger: CGACAAAGGCGACCCGAGCAATGAGGAGGCACCTAA...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGTTAGGTGCCTCCTCATaGCTCGGGTCGCCTTTGTCG +
Preference number: 5 (lower is better)
Translates to: QDSVLGVNSLTVGPMKQELGASS*LGSPLS
Trigger: CGACAAAGGCGACCCGAGCAATGAGGAGGCACCTAA...CTCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp GGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGGTTTTCCTGAACTCTTaGCTGGTGGGTTTGATGGCC +
Preference number: 5 (lower is better)
Translates to: GGCGVPGSVAMQSDWDEEVFLNS*LVGLMA
Trigger: GGCCATCAAACCCACCAGCAAAGAGTTCAGGAAAAC...CTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp TGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGAACGCGCTCAGTGCGCTaGGGCTGCCTCCCACTGCGC +
Preference number: 5 (lower is better)
Translates to: CGKTEAYTALLSEQLMCRTRSVR*GCLPLR
Trigger: GCGCAGTGGGAGGCAGCCCAAGCGCACTGAGCGCGT...TCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp GGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGCGGGGCCAATACATTTaGAGGCACCAGGCGCCTCTA +
Preference number: 5 (lower is better)
Translates to: GAYEAGVCGLRSSNVFMWRGQYI*RHQAPL
Trigger: TAGAGGCGCCTGGTGCCTCAAAATGTATTGGCCCCG...CCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp CTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATCGGGGCCAATACATTTaGAGGCACCAGGCGCCTCTA +
Preference number: 5 (lower is better)
Translates to: LTYRGAYEAGVCGLRSSNRGQYI*RHQAPL
Trigger: TAGAGGCGCCTGGTGCCTCAAAATGTATTGGCCCCG...ATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACGGTAAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp ACCCAGACGCCTCTGCTCTTTATCGTGGATCAAAGTCCCTGGGGCTTTTGTGTGGAGAGCCATGGCCTCTaGGGGATGGTGCCCTTGAAA +
Preference number: 5 (lower is better)
Translates to: TQTPLLFIVDQSPWGFCVESHGL*GMVPLK
Trigger: TTTCAAGGGCACCATCCCCAAGAGGCCATGGCTCTC...CACACAAAAGCCCCAGGGACTTTGATCCACGATAAAGAGCAGAGGCGTCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp CAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCTGAGGGTGCTGCGGGGGTGCAAATTTTACAGTaGAGATCGAAGAGGTGTGCG +
Preference number: 5 (lower is better)
Translates to: QGDPATAVNCMAPEGAAGVQILQ*RSKRCA
Trigger: CGCACACCTCTTCGATCTCAACTGTAAAATTTGCAC...CCCCGCAGCACCCTCAGGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAGTCCGCTTCTTCCGGTaGAAGTCGGGTCCGCTTTTC +
Preference number: 5 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEVRFFR*KSGPLF
Trigger: GAAAAGCGGACCCGACTTCAACCGGAAGAAGCGGAC...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGATGCAGACTGCTGCTCTaGCTGGAACAGCTCTGCCTT +
Preference number: 5 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRCRLLL*LEQLCL
Trigger: AAGGCAGAGCTGTTCCAGCAAGAGCAGCAGTCTGCA...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTTCCCTGTCCCTGGCCTaGTCTCGGTCCCGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCSLSLA*SRSRSL
Trigger: CAGAGAGCGGGACCGAGACAAGGCCAGGGACAGGGA...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGTGAGGTTTACAGCTTaGGAAAACAGTGACAGGAAG +
Preference number: 5 (lower is better)
Translates to: ADRGGCGVPGSVAMQSDWVRFTA*ENSDRK
Trigger: CTTCCTGTCACTGTTTTCCAAAGCTGTAAACCTCAC...CCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp GTTTCCCCTGAGGGCACAGCTGGGCACCTTCAGGCCTTCACTTGCTTAAGTGTGCTGACAGCTCCAAGTTaGGAGATGAGCAGGGAGAGA +
Preference number: 5 (lower is better)
Translates to: VSPEGTAGHLQAFTCLSVLTAPS*EMSRER
Trigger: TCTCTCCCTGCTCATCTCCAAACTTGGAGCTGTCAG...CACACTTAAGCAAGTGAAGGCCTGAAGGTGCCCAGCTGTGCCCTCAGGGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp AAGACCTCAGAGAAAAGAGCCCTTTCCATTCGAGCAGCTACAGAGGGCGGTGTTGCCTCAGCAAGTGCCTaGGTGGGCGAGTGTGACGTT +
Preference number: 5 (lower is better)
Translates to: KTSEKRALSIRAATEGGVASASA*VGECDV
Trigger: AACGTCACACTCGCCCACCAAGGCACTTGCTGAGGC...AACACCGCCCTCTGTAGCTGCTCGAATGGAAAGGGCTCTTTTCTCTGAGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS TCA 90 bp CACATTCAGGCTTCGGTCGGCCCAAGTCTCCAGGCTCCTCATCTTTaGTGTCCTGAGCCGCCTTTCCCTCCAACTTACTCTCTCTGTCAT +
Preference number: 5 (lower is better)
Translates to: HIQASVGPSLQAPHL*CPEPPFPPTYSLCH
Trigger: ATGACAGAGAGAGTAAGTTGGAGGGAAAGGCGGCTCAGGACATCAAAGATGAGGAGCCTGGAGACTTGGGCCGACCGAAGCCTGAATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 90 bp CCATGTTTTCCTGAACTCTTTGCTGGTGGGTTTGATGGCCTTAGGTaGCTCCTCATTGCTCGGGTCGCCTTTGTCGTCCATACCTGCTCC +
Preference number: 5 (lower is better)
Translates to: PCFPELFAGGFDGLR*LLIARVAFVVHTCS
Trigger: GGAGCAGGTATGGACGACAAAGGCGACCCGAGCAATGAGGAGGCACCTAAGGCCATCAAACCCACCAGCAAAGAGTTCAGGAAAACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 90 bp AGCAGAGTGGATACTTGGAGGGCTTCTTTTCCGACTGCGGGACTGTaGCTACTTTTGGATAGGCCGGAACGTCCGCTTCTTCCGGTTGAA +
Preference number: 5 (lower is better)
Translates to: SRVDTWRASFPTAGL*LLLDRPERPLLPVE
Trigger: TTCAACCGGAAGAAGCGGACGTTCCGGCCTATCCAAAAGTAGCCACAGTCCCGCAGTCGGAAAAGAAGCCCTCCAAGTATCCACTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATACGAATACTTACCAGTCCGCAGCAGCCATCTaGCCAGAGGGCCGACGCCTT +
Preference number: 5 (lower is better)
Translates to: GSVAMQSDWDEENTNTYQSAAAI*PEGRRL
Trigger: AAGGCGTCGGCCCTCTGGCAAGATGGCTGCTGCGGA...CTGGTAAGTATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370371.8
CDS-3UTR CAA 90 bp GACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTTTGCTCGGGTCGCCTTaGTCGTCCATACCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: DSVLGVNSLTVGPMKQECLLGSP*SSIPAP
Trigger: TGGAGCAGGTATGGACGACAAAGGCGACCCGAGCAA...ACACTCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp CAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGGTGTGTAGCGTGTTTAGGTGCCTCCTCATaGCTCGGGTCGCCTTTGTCG +
Preference number: 5 (lower is better)
Translates to: QECVAFEVRMCSCGCVACLGASS*LGSPLS
Trigger: CGACAAAGGCGACCCGAGCAATGAGGAGGCACCTAA...ACACGCTACACACCCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp GGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGTCTTTGCTGGTGGGTTaGATGGCCTTAGGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: GAYEAGVCGLRSSNVFMWSLLVG*MALGAS
Trigger: GGAGGCACCTAAGGCCATCAAACCCACCAGCAAAGA...CCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp CAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGTCTTTGCTGGTGGGTTaGATGGCCTTAGGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: QDSVLGVNSLTVGPMKQESLLVG*MALGAS
Trigger: GGAGGCACCTAAGGCCATCAAACCCACCAGCAAAGA...CTCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp GATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATATCTTTGCTGGTGGGTTaGATGGCCTTAGGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: DVACRAVWLCNQTGMKRISLLVG*MALGAS
Trigger: GGAGGCACCTAAGGCCATCAAACCCACCAGCAAAGA...TATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp AGCAGCTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTAGTCTCATCCTGCACTaGCAGAATGGTGCAGTTTGG +
Preference number: 5 (lower is better)
Translates to: SSYRGRCFLLPCTWGEQTSLILH*QNGAVW
Trigger: CCAAACTGCACCATTCTGCAAGTGCAGGATGAGACT...AGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp CAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCCGTCTACCCTTTATCCCTaGGTCTTCGCTAGACTTCTG +
Preference number: 5 (lower is better)
Translates to: QRCCQNNSCADRGGCGVPSTLYP*VFARLL
Trigger: CAGAAGTCTAGCGAAGACCAAGGGATAAAGGGTAGA...CGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp GACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTCGGGGCCAATACATTTaGAGGCACCAGGCGCCTCTA +
Preference number: 5 (lower is better)
Translates to: DSVLGVNSLTVGPMKQECRGQYI*RHQAPL
Trigger: TAGAGGCGCCTGGTGCCTCAAAATGTATTGGCCCCG...ACACTCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAGTCGCTGCGGCGTGTTaGAGGATACAGTCATTACTG +
Preference number: 5 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRVAAAC*RIQSLL
Trigger: CAGTAATGACTGTATCCTCAAACACGCCGCAGCGAC...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CTGACCAGTGGGTCTTCACAGGTGCGGAGAGGCCAGCTTCTCGGTCTTCACCTCTTAGGGTCCTTCAGGTaGAACATGATGCTGCGATAT +
Preference number: 5 (lower is better)
Translates to: LTSGSSQVRRGQLLGLHLLGSFR*NMMLRY
Trigger: ATATCGCAGCATCATGTTCAACCTGAAGGACCCTAA...GAGGTGAAGACCGAGAAGCTGGCCTCTCCGCACCTGTGAAGACCCACTGGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTCTGTGCATGAACTGCTaGGAGCGGTCCTGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCLCMNC*ERSWGP
Trigger: GGGACCCCAGGACCGCTCCAAGCAGTTCATGCACAG...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGACTTGCGTTCTTCAAATaGGGATGGTGCCACTCCTCG +
Preference number: 5 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRLAFFK*GWCHSS
Trigger: CGAGGAGTGGCACCATCCCAATTTGAAGAACGCAAG...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACCTCTTGCTCCGGTCCTaGCGGTCGCGGCCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHLLLRS*RSRPRS
Trigger: GGAGCGGGGCCGCGACCGCAAGGACCGGAGCAAGAG...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 90 bp CAGGCCTCTCCACGGAGTTCCTTCTCACGTCGGCACACATCCTGTTaGGCAGGTCATCAACAGTCACTTTCGCTTCTTCTAAGATGGTCT +
Preference number: 5 (lower is better)
Translates to: QASPRSSFSRRHTSC*AGHQQSLSLLLRWS
Trigger: AGACCATCTTAGAAGAAGCGAAAGTGACTGTTGATGACCTGCCCAACAGGATGTGTGCCGACGTGAGAAGGAACTCCGTGGAGAGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTTAGGTGCCTCCTCATaGCTCGGGTCGCCTTTGTCG +
Preference number: 5 (lower is better)
Translates to: CFHVLAVDNVEKLKRIQRLGASS*LGSPLS
Trigger: CGACAAAGGCGACCCGAGCAATGAGGAGGCACCTAA...GCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp ATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTTTTAGGTGCCTCCTCATaGCTCGGGTCGCCTTTGTCG +
Preference number: 5 (lower is better)
Translates to: MDESVTLFCVNLYPQQDLLGASS*LGSPLS
Trigger: CGACAAAGGCGACCCGAGCAATGAGGAGGCACCTAA...AAGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp AAGACCTCAGAGAAAAGAGCCCTTTCCATTCGAGCAGCTACAGAGGGCGGTGTTTCTTTGCTGGTGGGTTaGATGGCCTTAGGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: KTSEKRALSIRAATEGGVSLLVG*MALGAS
Trigger: GGAGGCACCTAAGGCCATCAAACCCACCAGCAAAGA...AACACCGCCCTCTGTAGCTGCTCGAATGGAAAGGGCTCTTTTCTCTGAGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp TACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCGTTTTCCTGAACTCTTaGCTGGTGGGTTTGATGGCC +
Preference number: 5 (lower is better)
Translates to: YSAVVRTTHVQTGVDVACVFLNS*LVGLMA
Trigger: GGCCATCAAACCCACCAGCAAAGAGTTCAGGAAAAC...GCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp GTGATGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACACCTGCGCCCTCTCGCTaGGCGATAGTGGTCCTTCGA +
Preference number: 5 (lower is better)
Translates to: VMLSCAGRGQCGKTEAYTPAPSR*AIVVLR
Trigger: TCGAAGGACCACTATCGCCAAGCGAGAGGGCGCAGG...TGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCACGCGCTCAGTGCGCTaGGGCTGCCTCCCACTGCGC +
Preference number: 5 (lower is better)
Translates to: KSYLFNASYERGFKKGLCTRSVR*GCLPLR
Trigger: GCGCAGTGGGAGGCAGCCCAAGCGCACTGAGCGCGT...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GCCAAGTCAAGTAATCAGTACGTGAAGCGGGCCGAGTACCCGATGGCCTGGCCCTCTTGCCACTTGGATTaGCAGCTTTCTCAATTCTAC +
Preference number: 5 (lower is better)
Translates to: AKSSNQYVKRAEYPMAWPSCHLD*QLSQFY
Trigger: GTAGAATTGAGAAAGCTGCAAATCCAAGTGGCAAGA...GGGCCAGGCCATCGGGTACTCGGCCCGCTTCACGTACTGATTACTTGACTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp GTGCAGACAGGGGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGTTTCTTCTTGCCACTaGGATTTGCAGCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: VQTGVDVACRAVWLCNQTVSSCH*DLQLSQ
Trigger: TTGAGAAAGCTGCAAATCCAAGTGGCAAGAAGAAAC...AGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACCCCTGTCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp TCCTGGACATGGGCTCTGCTTCCCGCTGATGGTGCAGCCGGTGTCTGTGATCAGATCTTGAGTTTCTTCTaGCCACTTGGATTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: SWTWALLPADGAAGVCDQILSFF*PLGFAA
Trigger: AGCTGCAAATCCAAGTGGCAAGAAGAAACTCAAGAT...CTGATCACAGACACCGGCTGCACCATCAGCGGGAAGCAGAGCCCATGTCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp CAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCCGACAGGCTGGAAGATCTaGAGTTTCTTCTTGCCACTT +
Preference number: 5 (lower is better)
Translates to: QRCCQNNSCADRGGCGVPTGWKI*SFFLPL
Trigger: AAGTGGCAAGAAGAAACTCAAGATCTTCCAGCCTGT...CGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp GATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATAGTCGCTGCGGCGTGTTaGAGGATACAGTCATTACTG +
Preference number: 5 (lower is better)
Translates to: DVACRAVWLCNQTGMKRIVAAAC*RIQSLL
Trigger: CAGTAATGACTGTATCCTCAAACACGCCGCAGCGAC...TATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGACTGGGGGCCGTCTTCTaGCTTTCATTGTGCAGTTTA +
Preference number: 5 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRLGAVF*LSLCSL
Trigger: TAAACTGCACAATGAAAGCAAGAAGACGGCCCCCAG...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTGCATCCCACCAATGTGAATaGTGTCAGGCAAATCCTCAC +
Preference number: 5 (lower is better)
Translates to: LQRAVFPPALYLGRTDCASHQCE*CQANPH
Trigger: GTGAGGATTTGCCTGACACAATTCACATTGGTGGGA...TGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp GACAGGGGAAACATGCCAGGACCTAGCCTTACACACACACACGCGCGCACATGCTCCTTGACGTGCCTGTaGTTATTAGCTACAACACCA +
Preference number: 5 (lower is better)
Translates to: DRGNMPGPSLTHTHARTCSLTCL*LLATTP
Trigger: TGGTGTTGTAGCTAATAACAACAGGCACGTCAAGGA...GCATGTGCGCGCGTGTGTGTGTGTAAGGCTAGGTCCTGGCATGTTTCCCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGCGCTCTCTTTGCTCTaGCTCCGGTCCTTGCGGTCG +
Preference number: 5 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKALSLL*LRSLRS
Trigger: CGACCGCAAGGACCGGAGCAAGAGCAAAGAGAGCGC...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGACTGACAAATACCAGTTaGGGGCCGAGCGTACTTTTC +
Preference number: 5 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRLTNTS*GPSVLF
Trigger: GAAAAGTACGCTCGGCCCCAAACTGGTATTTGTCAG...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGGTGAGGTTTACAGCTTaGGAAAACAGTGACAGGAAG +
Preference number: 5 (lower is better)
Translates to: GGCGVPGSVAMQSDWDEEVRFTA*ENSDRK
Trigger: CTTCCTGTCACTGTTTTCCAAAGCTGTAAACCTCAC...CTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp AAGGCACGCGTCCTGCGGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGCGTATACAGCGCTGTaGTCAGAACAACTCATGTGC +
Preference number: 5 (lower is better)
Translates to: KARVLRSGQCSRCELTYRAYTAL*SEQLMC
Trigger: GCACATGAGTTGTTCTGACAACAGCGCTGTATACGC...ACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACCGCAGGACGCGTGCCTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp TACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCGCGTATACAGCGCTGTaGTCAGAACAACTCATGTGC +
Preference number: 5 (lower is better)
Translates to: YSAVVRTTHVQTGVDVACAYTAL*SEQLMC
Trigger: GCACATGAGTTGTTCTGACAACAGCGCTGTATACGC...GCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp CCAGACAGCACCTGCCTTTATGACGAAGCACTTCAGAGGACACTGTGTGATCCACACACACTGTCGCACTaGCAACTGACCAGTGGGTCT +
Preference number: 5 (lower is better)
Translates to: PDSTCLYDEALQRTLCDPHTLSH*QLTSGS
Trigger: AGACCCACTGGTCAGTTGCAAGTGCGACAGTGTGTG...TGGATCACACAGTGTCCTCTGAAGTGCTTCGTCATAAAGGCAGGTGCTGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS GCA 90 bp GACGGGTCGAATGATTTCTTCTTTCCAAAGAGAGTCTGCAGGATGTaGTCCAGCGGTGATGCTGTTTTGGAAGCAGACGAAGCGGTGGAG +
Preference number: 5 (lower is better)
Translates to: DGSNDFFFPKRVCRM*SSGDAVLEADEAVE
Trigger: CTCCACCGCTTCGTCTGCTTCCAAAACAGCATCACCGCTGGAGCACATCCTGCAGACTCTCTTTGGAAAGAAGAAATCATTCGACCCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCTTAGGTGCCTCCTCATaGCTCGGGTCGCCTTTGTCG +
Preference number: 5 (lower is better)
Translates to: QLPVSFAVLELVITSSRLLGASS*LGSPLS
Trigger: CGACAAAGGCGACCCGAGCAATGAGGAGGCACCTAA...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGGTTTTCCTGAACTCTTaGCTGGTGGGTTTGATGGCC +
Preference number: 5 (lower is better)
Translates to: GAYEAGVCGLRSSNVFMWVFLNS*LVGLMA
Trigger: GGCCATCAAACCCACCAGCAAAGAGTTCAGGAAAAC...CCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp GGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGAGTCTCATCCTGCACTaGCAGAATGGTGCAGTTTGG +
Preference number: 5 (lower is better)
Translates to: GQDSVLGVNSLTVGPMKQSLILH*QNGAVW
Trigger: CCAAACTGCACCATTCTGCAAGTGCAGGATGAGACT...CTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp TCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGAGTCTCATCCTGCACTaGCAGAATGGTGCAGTTTGG +
Preference number: 5 (lower is better)
Translates to: SLTVGPMKQECVAFEVRMSLILH*QNGAVW
Trigger: CCAAACTGCACCATTCTGCAAGTGCAGGATGAGACT...CATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACGGTAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp GCGTCCTGCGGTCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTCTATTGTTCCTATACTaGTACAATCGGTGCCATCAG +
Preference number: 5 (lower is better)
Translates to: ASCGQDSVLGVNSLTVGPLLFLY*YNRCHQ
Trigger: CTGATGGCACCGATTGTACAAGTATAGGAACAATAG...AGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGACCGCAGGACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp GGTGGATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGCTATTGTTCCTATACTaGTACAATCGGTGCCATCAG +
Preference number: 5 (lower is better)
Translates to: GGCGVPGSVAMQSDWDEELLFLY*YNRCHQ
Trigger: CTGATGGCACCGATTGTACAAGTATAGGAACAATAG...CTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp ACCCTACAACCGTGCTCACCTGACAGCTCCAAGTTTGGAGATGAGCAGGGAGAGTCTACCCTTTATCCCTaGGTCTTCGCTAGACTTCTG +
Preference number: 5 (lower is better)
Translates to: TLQPCSPDSSKFGDEQGESTLYP*VFARLL
Trigger: CAGAAGTCTAGCGAAGACCAAGGGATAAAGGGTAGA...CTCTCCCTGCTCATCTCCAAACTTGGAGCTGTCAGGTGAGCACGGTTGTAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp CAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGCCGGTTTCTTCTTGCCACTaGGATTTGCAGCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: QRCCQNNSCADRGGCGVPVSSCH*DLQLSQ
Trigger: TTGAGAAAGCTGCAAATCCAAGTGGCAAGAAGAAAC...CGGCACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp GACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTCGCTGCGGCGTGTTaGAGGATACAGTCATTACTG +
Preference number: 5 (lower is better)
Translates to: DSVLGVNSLTVGPMKQECVAAAC*RIQSLL
Trigger: CAGTAATGACTGTATCCTCAAACACGCCGCAGCGAC...ACACTCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp ACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCAGGACAGTGTTCTAGTCGCTGCGGCGTGTTaGAGGATACAGTCATTACTG +
Preference number: 5 (lower is better)
Translates to: TCRIPSPRHASCGQDSVLVAAAC*RIQSLL
Trigger: CAGTAATGACTGTATCCTCAAACACGCCGCAGCGAC...TAGAACACTGTCCTGACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACCTAGGTGCAGGCTGCTaGCCCACCGCGGAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHLGAGC*PTAEPG
Trigger: TCCAGGCTCCGCGGTGGGCAAGCAGCCTGCACCTAG...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTCTAGGTGCAGGCTGCTaGCCCACCGCGGAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVLGAGC*PTAEPG
Trigger: TCCAGGCTCCGCGGTGGGCAAGCAGCCTGCACCTAG...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TTCACGCACACGCATTCATGTCAACAAGGACATCAGGAGAAGTTAACATTATACTCTTGGAGGCAGCCGTaGCCGCTGCAGGTGCCGGTC +
Preference number: 5 (lower is better)
Translates to: FTHTHSCQQGHQEKLTLYSWRQP*PLQVPV
Trigger: GACCGGCACCTGCAGCGGCAACGGCTGCCTCCAAGA...GTATAATGTTAACTTCTCCTGATGTCCTTGTTGACATGAATGCGTGTGCGTGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTTCTTGGAGGCAGCCGTaGCCGCTGCAGGTGCCGGTC +
Preference number: 5 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVSWRQP*PLQVPV
Trigger: GACCGGCACCTGCAGCGGCAACGGCTGCCTCCAAGA...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTGCCGAATTTGTGAATTaGGCTGCGATGGTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: HGRVSHSFLRESLPPTGPAEFVN*AAMVQH
Trigger: GTGCTGCACCATCGCAGCCAAATTCACAAATTCGGC...AGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGATTAGCTAGTATGGACTaGGGCACCATCACAGAAGTC +
Preference number: 5 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRLASMD*GTITEV
Trigger: GACTTCTGTGATGGTGCCCAAGTCCATACTAGCTAA...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTGGACTGTGGCTACTTTaGGATAGGCCGGAACGTCCG +
Preference number: 5 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCGLWLL*DRPERP
Trigger: CGGACGTTCCGGCCTATCCAAAAGTAGCCACAGTCC...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACATGCAGACTGCTGCTCTaGCTGGAACAGCTCTGCCTT +
Preference number: 5 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTCRLLL*LEQLCL
Trigger: AAGGCAGAGCTGTTCCAGCAAGAGCAGCAGTCTGCA...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCTCCCGGCTGGAGTCCTaGTCCCGGTGTCGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: KSYLFNASYERGFKKGLCSRLES*SRCRSH
Trigger: GTGGGACCGACACCGGGACAAGGACTCCAGCCGGGA...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACCGCTCTCGGTCGCGGTaGGCGCTCCTCTCCCGGTTT +
Preference number: 5 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHRSRSR*ALLSRF
Trigger: AAACCGGGAGAGGAGCGCCAACCGCGACCGAGAGCG...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGGCGTATACAGCGCTGTaGTCAGAACAACTCATGTGC +
Preference number: 5 (lower is better)
Translates to: GAYEAGVCGLRSSNVFMWAYTAL*SEQLMC
Trigger: GCACATGAGTTGTTCTGACAACAGCGCTGTATACGC...CCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp CAAGGACAAATGTCCTCAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCATCCACACACCCGCTTaGAGAGAACACCAATCCTCT +
Preference number: 5 (lower is better)
Translates to: QGQMSSGRSSYCCELHGSIHTPA*REHQSS
Trigger: AGAGGATTGGTGTTCTCTCAAAGCGGGTGTGTGGAT...GGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTGAGGACATTTGTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS TCA 90 bp GTTCTTTACCTGAGCTTAGAAACTTCATTGTCGCTGCGGCGTGTTTaGGGATACAGTCATTACTGCAGTACACCGAGTCGGGCTGCGCCA +
Preference number: 5 (lower is better)
Translates to: VLYLSLETSLSLRRV*GYSHYCSTPSRAAP
Trigger: TGGCGCAGCCCGACTCGGTGTACTGCAGTAATGACTGTATCCTCAAACACGCCGCAGCGACAATGAAGTTTCTAAGCTCAGGTAAAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 90 bp TCTCTGGCGGACGGGTCGAATGATTTCTTCTTTCCAAAGAGAGTCTaGAGGATGTGCTCCAGCGGTGATGCTGTTTTGGAAGCAGACGAA +
Preference number: 5 (lower is better)
Translates to: SLADGSNDFFFPKRV*RMCSSGDAVLEADE
Trigger: TTCGTCTGCTTCCAAAACAGCATCACCGCTGGAGCACATCCTGCAGACTCTCTTTGGAAAGAAGAAATCATTCGACCCGTCCGCCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTGGGTGTGTAGCGTGTGCAGAATGGTGCAGTTaGGGCAGATATAGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: QECVAFEVRMCSCGCVACAEWCS*GRYSLP
Trigger: GGGAAGACTATATCTGCCCAAACTGCACCATTCTGC...ACACGCTACACACCCACATGAACACATTCGAACTTCGAAGGCCACACACTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp TCAGGACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGCAGAATGGTGCAGTTaGGGCAGATATAGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: SGQCSRCELTYRGAYEAGAEWCS*GRYSLP
Trigger: GGGAAGACTATATCTGCCCAAACTGCACCATTCTGC...TCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp CCAGACAGCACCTGCCTTTATGACGAAGCACTTCAGAGGACACTGTGTGATCCAGCAGAATGGTGCAGTTaGGGCAGATATAGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: PDSTCLYDEALQRTLCDPAEWCS*GRYSLP
Trigger: GGGAAGACTATATCTGCCCAAACTGCACCATTCTGC...TGGATCACACAGTGTCCTCTGAAGTGCTTCGTCATAAAGGCAGGTGCTGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGAGAGCCATGGCCTCTaGGGGATGGTGCCCTTGAAA +
Preference number: 5 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKESHGL*GMVPLK
Trigger: TTTCAAGGGCACCATCCCCAAGAGGCCATGGCTCTC...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GTTTCCCCTGAGGGCACAGCTGGGCACCTTCAGGCCTTCACTTGCTTAAGTGTGGTCTTCTTGCTTTCATaGTGCAGTTTAGTTCTGGAC +
Preference number: 5 (lower is better)
Translates to: VSPEGTAGHLQAFTCLSVVFLLS*CSLVLD
Trigger: GTCCAGAACTAAACTGCACAATGAAAGCAAGAAGAC...CACACTTAAGCAAGTGAAGGCCTGAAGGTGCCCAGCTGTGCCCTCAGGGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp AAGACCTCAGAGAAAAGAGCCCTTTCCATTCGAGCAGCTACAGAGGGCGGTGTTGAACTGACAGGTATCTaGGGTCAGGAGATGAGGATG +
Preference number: 5 (lower is better)
Translates to: KTSEKRALSIRAATEGGVELTGI*GQEMRM
Trigger: CATCCTCATCTCCTGACCCAAGATACCTGTCAGTTC...AACACCGCCCTCTGTAGCTGCTCGAATGGAAAGGGCTCTTTTCTCTGAGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGATCCCACCAATGTGAATaGTGTCAGGCAAATCCTCAC +
Preference number: 5 (lower is better)
Translates to: AERTFPGIQKNCSEGETGSHQCE*CQANPH
Trigger: GTGAGGATTTGCCTGACACAATTCACATTGGTGGGA...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACAGAGCAGAGTGGATACTaGGAGGGCTTCTTTTCCGAC +
Preference number: 5 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTEQSGY*EGFFSD
Trigger: GTCGGAAAAGAAGCCCTCCAAGTATCCACTCTGCTC...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTAGCGGTGATGCTGTTTaGGAAGCAGACGAAGCGGTG +
Preference number: 5 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCSGDAV*EADEAV
Trigger: CACCGCTTCGTCTGCTTCCAAAACAGCATCACCGCT...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTTCGGCACACATCCTGTaGGGCAGGTCATCAACAGTC +
Preference number: 5 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCSAHIL*GRSSTV
Trigger: GACTGTTGATGACCTGCCCAACAGGATGTGTGCCGA...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCTCGGCACACATCCTGTaGGGCAGGTCATCAACAGTC +
Preference number: 5 (lower is better)
Translates to: QLPVSFAVLELVITSSRLSAHIL*GRSSTV
Trigger: GACTGTTGATGACCTGCCCAACAGGATGTGTGCCGA...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACAGAATGAAGATTTCTaGGGTCCTCATACTGGGCTG +
Preference number: 5 (lower is better)
Translates to: AERTFPGIQKNCSEGETGQNEDF*GPHTGL
Trigger: CAGCCCAGTATGAGGACCCAAGAAATCTTCATTCTG...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGCGTATACAGCGCTGTaGTCAGAACAACTCATGTGC +
Preference number: 5 (lower is better)
Translates to: DSVLGVNSLTVGPMKQECAYTAL*SEQLMC
Trigger: GCACATGAGTTGTTCTGACAACAGCGCTGTATACGC...ACACTCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS TCA 90 bp AGCATCTCCAGGTCTCCATTTAGCTTCCTGCTGATCTGCCGTTTCTaGATGAGTCTCATCCTGCACTTGCAGAATGGTGCAGTTTGGGCA +
Preference number: 5 (lower is better)
Translates to: SISRSPFSFLLICRF*MSLILHLQNGAVWA
Trigger: TGCCCAAACTGCACCATTCTGCAAGTGCAGGATGAGACTCATTCAGAAACGGCAGATCAGCAGGAAGCTAAATGGAGACCTGGAGATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS-3UTR CAA 90 bp GCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCTGTTGTCAGAAGTTTTCCTGAACTCTTaGCTGGTGGGTTTGATGGCC +
Preference number: 5 (lower is better)
Translates to: AGRGQCGKTEAYTALLSEVFLNS*LVGLMA
Trigger: GGCCATCAAACCCACCAGCAAAGAGTTCAGGAAAAC...TTCTGACAACAGCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp ATGGACGAGTCAGTCACTCTTTTCTGCGTGAATCTCTACCCCCAACAGGACCTTGTTTTCCTGAACTCTTaGCTGGTGGGTTTGATGGCC +
Preference number: 5 (lower is better)
Translates to: MDESVTLFCVNLYPQQDLVFLNS*LVGLMA
Trigger: GGCCATCAAACCCACCAGCAAAGAGTTCAGGAAAAC...AAGGTCCTGTTGGGGGTAGAGATTCACGCAGAAAAGAGTGACTGACTCGTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGCCTGCGCCCTCTCGCTaGGCGATAGTGGTCCTTCGA +
Preference number: 5 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQPAPSR*AIVVLR
Trigger: TCGAAGGACCACTATCGCCAAGCGAGAGGGCGCAGG...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TGCTTTCATGTGCTGGCCGTGGACAATGTGGAAAAACTGAAGCGTATACAGCGCAGTCTCATCCTGCACTaGCAGAATGGTGCAGTTTGG +
Preference number: 5 (lower is better)
Translates to: CFHVLAVDNVEKLKRIQRSLILH*QNGAVW
Trigger: CCAAACTGCACCATTCTGCAAGTGCAGGATGAGACT...GCGCTGTATACGCTTCAGTTTTTCCACATTGTCCACGGCCAGCACATGAAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp GTCACGTGGAGCTGGCCAGAGCTCTTCACAAGCAACACCAAGAACCTCTACCAGCTATTGTTCCTATACTaGTACAATCGGTGCCATCAG +
Preference number: 5 (lower is better)
Translates to: VTWSWPELFTSNTKNLYQLLFLY*YNRCHQ
Trigger: CTGATGGCACCGATTGTACAAGTATAGGAACAATAG...CTGGTAGAGGTTCTTGGTGTTGCTTGTGAAGAGCTCTGGCCAGCTCCACGTGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp GAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTCTACCCTTTATCCCTaGGTCTTCGCTAGACTTCTG +
Preference number: 5 (lower is better)
Translates to: EAYTALLSEQLMCRQGWMSTLYP*VFARLL
Trigger: CAGAAGTCTAGCGAAGACCAAGGGATAAAGGGTAGA...CATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp ACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCAGGACAGTGTTCTATCTACCCTTTATCCCTaGGTCTTCGCTAGACTTCTG +
Preference number: 5 (lower is better)
Translates to: TCRIPSPRHASCGQDSVLSTLYP*VFARLL
Trigger: CAGAAGTCTAGCGAAGACCAAGGGATAAAGGGTAGA...TAGAACACTGTCCTGACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp ACCCTACAACCGTGCTCACCTGACAGCTCCAAGTTTGGAGATGAGCAGGGAGAGATCTTGAGTTTCTTCTaGCCACTTGGATTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: TLQPCSPDSSKFGDEQGEILSFF*PLGFAA
Trigger: AGCTGCAAATCCAAGTGGCAAGAAGAAACTCAAGAT...CTCTCCCTGCTCATCTCCAAACTTGGAGCTGTCAGGTGAGCACGGTTGTAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp GTTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAATCTTGAGTTTCTTCTaGCCACTTGGATTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: VWGRAYFSRDTEELLRRRILSFF*PLGFAA
Trigger: AGCTGCAAATCCAAGTGGCAAGAAGAAACTCAAGAT...TCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACAGGCTGGAAGATCTaGAGTTTCTTCTTGCCACTT +
Preference number: 5 (lower is better)
Translates to: FGAERTFPGIQKNCSEGETGWKI*SFFLPL
Trigger: AAGTGGCAAGAAGAAACTCAAGATCTTCCAGCCTGT...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp ATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGACAGGCTGGAAGATCTaGAGTTTCTTCTTGCCACTT +
Preference number: 5 (lower is better)
Translates to: IQRCCQNNSCADRGGCGVTGWKI*SFFLPL
Trigger: AAGTGGCAAGAAGAAACTCAAGATCTTCCAGCCTGT...CACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp CAAGGACAAATGTCCTCAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCACAGGCTGGAAGATCTaGAGTTTCTTCTTGCCACTT +
Preference number: 5 (lower is better)
Translates to: QGQMSSGRSSYCCELHGSTGWKI*SFFLPL
Trigger: AAGTGGCAAGAAGAAACTCAAGATCTTCCAGCCTGT...GGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTGAGGACATTTGTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGAACAGGCTGGAAGATCTaGAGTTTCTTCTTGCCACTT +
Preference number: 5 (lower is better)
Translates to: AERTFPGIQKNCSEGETGTGWKI*SFFLPL
Trigger: AAGTGGCAAGAAGAAACTCAAGATCTTCCAGCCTGT...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GCGGCGGCTAAGACCTGTAAAAGCAGCTTTTGGAAACACAAACGGATGAGATGTGTCGCTGCGGCGTGTTaGAGGATACAGTCATTACTG +
Preference number: 5 (lower is better)
Translates to: AAAKTCKSSFWKHKRMRCVAAAC*RIQSLL
Trigger: CAGTAATGACTGTATCCTCAAACACGCCGCAGCGAC...ACATCTCATCCGTTTGTGTTTCCAAAAGCTGCTTTTACAGGTCTTAGCCGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTGAGCCAGGGAACTTCTaGGAGGCAGCCGTTGCCGCT +
Preference number: 5 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVEPGNF*EAAVAA
Trigger: AGCGGCAACGGCTGCCTCCAAGAAGTTCCCTGGCTC...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAATTAGGGTCCTTCAGGTaGAACATGATGCTGCGATAT +
Preference number: 5 (lower is better)
Translates to: FGAERTFPGIQKNCSEGELGSFR*NMMLRY
Trigger: ATATCGCAGCATCATGTTCAACCTGAAGGACCCTAA...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GACAGGGGAAACATGCCAGGACCTAGCCTTACACACACACACGCGCGCACATGCCAGAGCTGTCATGCTTaGATTTTAAGTCTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: DRGNMPGPSLTHTHARTCQSCHA*ILSLLS
Trigger: AGAAAGAAGACTTAAAATCAAAGCATGACAGCTCTG...GCATGTGCGCGCGTGTGTGTGTGTAAGGCTAGGTCCTGGCATGTTTCCCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGATCCTTGACGTGCCTGTaGTTATTAGCTACAACACCA +
Preference number: 5 (lower is better)
Translates to: AERTFPGIQKNCSEGETGSLTCL*LLATTP
Trigger: TGGTGTTGTAGCTAATAACAACAGGCACGTCAAGGA...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAACTAGAGCCTTATCTTTaGAGAACTGACCGAACTGCT +
Preference number: 5 (lower is better)
Translates to: FGAERTFPGIQKNCSEGELEPYL*RTDRTA
Trigger: AGCAGTTCGGTCAGTTCTCAAAAGATAAGGCTCTAG...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTGGCAGTGAGGCGGGCTaGTCTGCAGACTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVGSEAG*SADCCS
Trigger: AGAGCAGCAGTCTGCAGACAAGCCCGCCTCACTGCC...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGCTGAGCCGAGAGCCTaGTCCTGCGACGCGAACCCC +
Preference number: 5 (lower is better)
Translates to: AISKAICSTHLTNVALKRAEPRA*SCDANP
Trigger: GGGGTTCGCGTCGCAGGACAAGGCTCTCGGCTCAGC...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAAGGGTGCAGGCGCCCTTaGGTTTGTGAATCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQGCRRP*VCESWW
Trigger: CCACCAAGATTCACAAACCAAAGGGCGCCTGCACCC...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp ATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGGTGAGGTTTACAGCTTaGGAAAACAGTGACAGGAAG +
Preference number: 5 (lower is better)
Translates to: IQRCCQNNSCADRGGCGVVRFTA*ENSDRK
Trigger: CTTCCTGTCACTGTTTTCCAAAGCTGTAAACCTCAC...CACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp ACCATGGAAGTGTGTGAGATTTCACGCACACGCATTCATGTCAACAAGGACATCGCCAAGATGAGCTGGTaGCAGGCTGTGGGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: TMEVCEISRTRIHVNKDIAKMSW*QAVGFS
Trigger: GGAAAAACCCACAGCCTGCAACCAGCTCATCTTGGC...GATGTCCTTGTTGACATGAATGCGTGTGCGTGAAATCTCACACACTTCCATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp CTACAGAGGGCGGTGTTTCCTCCTGCCCTGTACTTGGGGAGAACAGACTGTGCAAATCACCCTCAACCCTaGACAAAGATGTATTTTAGG +
Preference number: 5 (lower is better)
Translates to: LQRAVFPPALYLGRTDCANHPQP*TKMYFR
Trigger: CCTAAAATACATCTTTGTCAAGGGTTGAGGGTGATT...TGCACAGTCTGTTCTCCCCAAGTACAGGGCAGGAGGAAACACCGCCCTCTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp CCAGACAGCACCTGCCTTTATGACGAAGCACTTCAGAGGACACTGTGTGATCCACCTTCAGGCCTTCACTaGCTTAAGTGTGAACAGCAA +
Preference number: 5 (lower is better)
Translates to: PDSTCLYDEALQRTLCDPPSGLH*LKCEQQ
Trigger: TTGCTGTTCACACTTAAGCAAGTGAAGGCCTGAAGG...TGGATCACACAGTGTCCTCTGAAGTGCTTCGTCATAAAGGCAGGTGCTGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACTATTGTTCCTATACTaGTACAATCGGTGCCATCAG +
Preference number: 5 (lower is better)
Translates to: AERTFPGIQKNCSEGETGLLFLY*YNRCHQ
Trigger: CTGATGGCACCGATTGTACAAGTATAGGAACAATAG...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GATGTGGCGTGCCGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATACTATTGTTCCTATACTaGTACAATCGGTGCCATCAG +
Preference number: 5 (lower is better)
Translates to: DVACRAVWLCNQTGMKRILLFLY*YNRCHQ
Trigger: CTGATGGCACCGATTGTACAAGTATAGGAACAATAG...TATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCGGCACGCCACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp CTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATCTATTGTTCCTATACTaGTACAATCGGTGCCATCAG +
Preference number: 5 (lower is better)
Translates to: LTYRGAYEAGVCGLRSSNLLFLY*YNRCHQ
Trigger: CTGATGGCACCGATTGTACAAGTATAGGAACAATAG...ATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACGGTAAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp CGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGTCTTGCCACTTGGATTaGCAGCTTTCTCAATTCTAC +
Preference number: 5 (lower is better)
Translates to: RGAYEAGVCGLRSSNVFMSCHLD*QLSQFY
Trigger: GTAGAATTGAGAAAGCTGCAAATCCAAGTGGCAAGA...CATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp CAAGAAAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCTCTTGCCACTTGGATTaGCAGCTTTCTCAATTCTAC +
Preference number: 5 (lower is better)
Translates to: QESQSHVEYQVQGTRPAVSCHLD*QLSQFY
Trigger: GTAGAATTGAGAAAGCTGCAAATCCAAGTGGCAAGA...GACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAGTTTCTTCTTGCCACTaGGATTTGCAGCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: FGAERTFPGIQKNCSEGEVSSCH*DLQLSQ
Trigger: TTGAGAAAGCTGCAAATCCAAGTGGCAAGAAGAAAC...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTTTCTTCTTGCCACTaGGATTTGCAGCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: LTYRGAYEAGVCGLRSSNVSSCH*DLQLSQ
Trigger: TTGAGAAAGCTGCAAATCCAAGTGGCAAGAAGAAAC...ATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACGGTAAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp ATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGTGGCGTGGTTTCTTCTTGCCACTaGGATTTGCAGCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: IQRCCQNNSCADRGGCGVVSSCH*DLQLSQ
Trigger: TTGAGAAAGCTGCAAATCCAAGTGGCAAGAAGAAAC...CACGCCACATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp ACCCAGACGCCTCTGCTCTTTATCGTGGATCAAAGTCCCTGGGGCTTTTGTGTGGTTTCTTCTTGCCACTaGGATTTGCAGCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: TQTPLLFIVDQSPWGFCVVSSCH*DLQLSQ
Trigger: TTGAGAAAGCTGCAAATCCAAGTGGCAAGAAGAAAC...CACACAAAAGCCCCAGGGACTTTGATCCACGATAAAGAGCAGAGGCGTCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp CAAGAAAGCCAGTCACATGTAGAATACCAAGTCCAAGGCACGCGTCCTGCGGTCATCTTGAGTTTCTTCTaGCCACTTGGATTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: QESQSHVEYQVQGTRPAVILSFF*PLGFAA
Trigger: AGCTGCAAATCCAAGTGGCAAGAAGAAACTCAAGAT...GACCGCAGGACGCGTGCCTTGGACTTGGTATTCTACATGTGACTGGCTTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp CGTGGGGCCTATGAAGCAGGAGTGTGTGGCCTTCGAAGTTCGAATGTGTTCATGATCTTGAGTTTCTTCTaGCCACTTGGATTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: RGAYEAGVCGLRSSNVFMILSFF*PLGFAA
Trigger: AGCTGCAAATCCAAGTGGCAAGAAGAAACTCAAGAT...CATGAACACATTCGAACTTCGAAGGCCACACACTCCTGCTTCATAGGCCCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp GAAGCGTATACAGCGCTGTTGTCAGAACAACTCATGTGCAGACAGGGGTGGATGACAGGCTGGAAGATCTaGAGTTTCTTCTTGCCACTT +
Preference number: 5 (lower is better)
Translates to: EAYTALLSEQLMCRQGWMTGWKI*SFFLPL
Trigger: AAGTGGCAAGAAGAAACTCAAGATCTTCCAGCCTGT...CATCCACCCCTGTCTGCACATGAGTTGTTCTGACAACAGCGCTGTATACGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp AGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGACAGGCTGGAAGATCTaGAGTTTCTTCTTGCCACTT +
Preference number: 5 (lower is better)
Translates to: SVLGVNSLTVGPMKQECVTGWKI*SFFLPL
Trigger: AAGTGGCAAGAAGAAACTCAAGATCTTCCAGCCTGT...CACACACTCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGAACGTTCTGTCCACATTaGGATGAGAAGCACTTTCTA +
Preference number: 5 (lower is better)
Translates to: AERTFPGIQKNCSEGETGTFCPH*DEKHFL
Trigger: TAGAAAGTGCTTCTCATCCAAATGTGGACAGAACGT...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CAAGGACAAATGTCCTCAGGGAGATCCAGCTACTGCTGTGAACTGCATGGCTCCACGTTCTGTCCACATTaGGATGAGAAGCACTTTCTA +
Preference number: 5 (lower is better)
Translates to: QGQMSSGRSSYCCELHGSTFCPH*DEKHFL
Trigger: TAGAAAGTGCTTCTCATCCAAATGTGGACAGAACGT...GGAGCCATGCAGTTCACAGCAGTAGCTGGATCTCCCTGAGGACATTTGTCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS-3UTR CAA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCCATAAAGTTAGGCGCTaGGCCTCTGGGTCCTTCAAA +
Preference number: 5 (lower is better)
Translates to: QLPVSFAVLELVITSSRLHKVRR*ASGSFK
Trigger: TTTGAAGGACCCAGAGGCCAAGCGCCTAACTTTATG...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGTCCCGAGCGCTCTCTTaGCTCTTGCTCCGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQSRALS*LLLRSL
Trigger: CAAGGACCGGAGCAAGAGCAAAGAGAGCGCTCGGGA...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTTCCCGAGCGCTCTCTTaGCTCTTGCTCCGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVSRALS*LLLRSL
Trigger: CAAGGACCGGAGCAAGAGCAAAGAGAGCGCTCGGGA...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGAGACTTTACACAAGTCTaGTTCCACGTTCAAGGACAA +
Preference number: 5 (lower is better)
Translates to: AERTFPGIQKNCSEGETGDFTQV*FHVQGQ
Trigger: TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTC...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 90 bp GATCTGCCGTTTCTGAATGAGTCTCATCCTGCACTTGCAGAATGGTaGAGTTTGGGCAGATATAGTCTTCCCCATTCCTTTCCAAAAGCC +
Preference number: 5 (lower is better)
Translates to: DLPFLNESHPALAEW*SLGRYSLPHSFPKA
Trigger: GGCTTTTGGAAAGGAATGGGGAAGACTATATCTGCCCAAACTGCACCATTCTGCAAGTGCAGGATGAGACTCATTCAGAAACGGCAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS-3UTR CAA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAACTCACAACAACACTGTaGTCAGCCACTGTTCACGAG +
Preference number: 5 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKLTTTL*SATVHE
Trigger: CTCGTGAACAGTGGCTGACAACAGTGTTGTTGTGAG...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGTTGCTCGGGTCGCCTTaGTCGTCCATACCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQLLGSP*SSIPAP
Trigger: TGGAGCAGGTATGGACGACAAAGGCGACCCGAGCAA...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACTTGCTCGGGTCGCCTTaGTCGTCCATACCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHLLGSP*SSIPAP
Trigger: TGGAGCAGGTATGGACGACAAAGGCGACCCGAGCAA...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAAGTCTCATCCTGCACTaGCAGAATGGTGCAGTTTGG +
Preference number: 5 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKSLILH*QNGAVW
Trigger: CCAAACTGCACCATTCTGCAAGTGCAGGATGAGACT...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp AGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTGTGTCTTGCCACTTGGATTaGCAGCTTTCTCAATTCTAC +
Preference number: 5 (lower is better)
Translates to: SVLGVNSLTVGPMKQECVSCHLD*QLSQFY
Trigger: GTAGAATTGAGAAAGCTGCAAATCCAAGTGGCAAGA...CACACACTCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp GACAGTGTTCTAGGTGTGAACTCACTTACCGTGGGGCCTATGAAGCAGGAGTGTATCTTGAGTTTCTTCTaGCCACTTGGATTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: DSVLGVNSLTVGPMKQECILSFF*PLGFAA
Trigger: AGCTGCAAATCCAAGTGGCAAGAAGAAACTCAAGAT...ACACTCCTGCTTCATAGGCCCCACGGTAAGTGAGTTCACACCTAGAACACTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGCGGGGCCAATACATTTaGAGGCACCAGGCGCCTCTA +
Preference number: 5 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQRGQYI*RHQAPL
Trigger: TAGAGGCGCCTGGTGCCTCAAAATGTATTGGCCCCG...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGAGCCAGGGAACTTCTaGGAGGCAGCCGTTGCCGCT +
Preference number: 5 (lower is better)
Translates to: AISKAICSTHLTNVALKREPGNF*EAAVAA
Trigger: AGCGGCAACGGCTGCCTCCAAGAAGTTCCCTGGCTC...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGAAAGTCATCGCTGTCATaGACTCTTTTCCACAAAATC +
Preference number: 5 (lower is better)
Translates to: AERTFPGIQKNCSEGETGKSSLS*TLFHKI
Trigger: GATTTTGTGGAAAAGAGTCAATGACAGCGATGACTT...TCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAAACTGGACCAACATTAGGGTCCTTCAGGTaGAACATGATGCTGCGATAT +
Preference number: 5 (lower is better)
Translates to: RTFPGIQKNCSEGETGPTLGSFR*NMMLRY
Trigger: ATATCGCAGCATCATGTTCAACCTGAAGGACCCTAA...TGTTGGTCCAGTTTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCTTAGCTAGTATGGACTaGGGCACCATCACAGAAGTC +
Preference number: 5 (lower is better)
Translates to: QLPVSFAVLELVITSSRLLASMD*GTITEV
Trigger: GACTTCTGTGATGGTGCCCAAGTCCATACTAGCTAA...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGAACTGACAGGTATCTaGGGTCAGGAGATGAGGATG +
Preference number: 5 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKELTGI*GQEMRM
Trigger: CATCCTCATCTCCTGACCCAAGATACCTGTCAGTTC...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACGGACTGTGGCTACTTTaGGATAGGCCGGAACGTCCG +
Preference number: 5 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHGLWLL*DRPERP
Trigger: CGGACGTTCCGGCCTATCCAAAAGTAGCCACAGTCC...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAACTTGCGTTCTTCAAATaGGGATGGTGCCACTCCTCG +
Preference number: 5 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQLAFFK*GWCHSS
Trigger: CGAGGAGTGGCACCATCCCAATTTGAAGAACGCAAG...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAACATAAAGTTAGGCGCTaGGCCTCTGGGTCCTTCAAA +
Preference number: 5 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKHKVRR*ASGSFK
Trigger: TTTGAAGGACCCAGAGGCCAAGCGCCTAACTTTATG...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCGGGTGCAGGCGCCCTTaGGTTTGTGAATCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: KSYLFNASYERGFKKGLCGCRRP*VCESWW
Trigger: CCACCAAGATTCACAAACCAAAGGGCGCCTGCACCC...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGTCCAGCGGCTTCTCTTaGGGCCCCACGTCAAACCGC +
Preference number: 5 (lower is better)
Translates to: AISKAICSTHLTNVALKRSSGFS*GPTSNR
Trigger: GCGGTTTGACGTGGGGCCCAAAGAGAAGCCGCTGGA...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TTTGGGGCCGAGCGTACTTTTCCCGGGATACAGAAGAACTGCTCAGAAGGCGAATTAACCTATGGACACTaGGCTTTCAACACCAAACAT +
Preference number: 5 (lower is better)
Translates to: FGAERTFPGIQKNCSEGELTYGH*AFNTKH
Trigger: ATGTTTGGTGTTGAAAGCCAAGTGTCCATAGGTTAA...TTCGCCTTCTGAGCAGTTCTTCTGTATCCCGGGAAAAGTACGCTCGGCCCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS TCA 90 bp GTCGTCCATACCTGCTCCAACACTGAAAGCTTGGACACTTTTCCCTaGAATCCTAAATACAACCAAAAACCCTGGCAGACGAAACCTCTG +
Preference number: 5 (lower is better)
Translates to: VVHTCSNTESLDTFP*NPKYNQKPWQTKPL
Trigger: CAGAGGTTTCGTCTGCCAGGGTTTTTGGTTGTATTTAGGATTTCAGGGAAAAGTGTCCAAGCTTTCAGTGTTGGAGCAGGTATGGACGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 90 bp GCTGATCTGCCGTTTCTGAATGAGTCTCATCCTGCACTTGCAGAATaGTGCAGTTTGGGCAGATATAGTCTTCCCCATTCCTTTCCAAAA +
Preference number: 5 (lower is better)
Translates to: ADLPFLNESHPALAE*CSLGRYSLPHSFPK
Trigger: TTTTGGAAAGGAATGGGGAAGACTATATCTGCCCAAACTGCACCATTCTGCAAGTGCAGGATGAGACTCATTCAGAAACGGCAGATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 90 bp TGGCCTCTCTTTCCACGTGGAAAGCTCTTTAGATACAAGTTCTTCTaGCTTCAGTCTCACAAGTTTCGCCAAAGAGATTTCCTCACGCAG +
Preference number: 5 (lower is better)
Translates to: WPLFPRGKLFRYKFF*LQSHKFRQRDFLTQ
Trigger: CTGCGTGAGGAAATCTCTTTGGCGAAACTTGTGAGACTGAAGCCAGAAGAACTTGTATCTAAAGAGCTTTCCACGTGGAAAGAGAGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS-3UTR CAA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAAGCAGAATGGTGCAGTTaGGGCAGATATAGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQAEWCS*GRYSLP
Trigger: GGGAAGACTATATCTGCCCAAACTGCACCATTCTGC...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGAGGGGCTGTTTTCTTaGAGGCTGCCATGGCTGCCG +
Preference number: 5 (lower is better)
Translates to: AISKAICSTHLTNVALKREGLFS*RLPWLP
Trigger: CGGCAGCCATGGCAGCCTCAAAGAAAACAGCCCCTC...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAATGCTCCTCGATCTGTTaGTTCAGCTCTTCTAGCATC +
Preference number: 5 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKCSSIC*FSSSSI
Trigger: GATGCTAGAAGAGCTGAACAAACAGATCGAGGAGCA...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACTGGGCAAGGACGACTTaGGTGGTGGAGACATCAAGG +
Preference number: 5 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHWARTT*VVETSR
Trigger: CCTTGATGTCTCCACCACCAAAGTCGTCCTTGCCCA...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 90 bp CGCCTCTATCACAGGCTGGAAGATCTTGAGTTTCTTCTTGCCACTTaGATTTGCAGCTTTCTCAATTCTACCCTTTATCCCTTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: RLYHRLEDLEFLLAT*ICSFLNSTLYPLVF
Trigger: GAAGACCAAGGGATAAAGGGTAGAATTGAGAAAGCTGCAAATCCAAGTGGCAAGAAGAAACTCAAGATCTTCCAGCCTGTGATAGAGGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS-3UTR CAA 90 bp CGGGCAGTGTGGCTATGCAATCAGACTGGGATGAAGAGAATACGAATACTTACCTCTTGCCACTTGGATTaGCAGCTTTCTCAATTCTAC +
Preference number: 5 (lower is better)
Translates to: RAVWLCNQTGMKRIRILTSCHLD*QLSQFY
Trigger: GTAGAATTGAGAAAGCTGCAAATCCAAGTGGCAAGA...GGTAAGTATTCGTATTCTCTTCATCCCAGTCTGATTGCATAGCCACACTGCCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTGCCGAATTTGTGAATTaGGCTGCGATGGTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVAEFVN*AAMVQH
Trigger: GTGCTGCACCATCGCAGCCAAATTCACAAATTCGGC...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGGCCGAATTTGTGAATTaGGCTGCGATGGTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQAEFVN*AAMVQH
Trigger: GTGCTGCACCATCGCAGCCAAATTCACAAATTCGGC...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCGTCTTCTTGCTTTCATaGTGCAGTTTAGTTCTGGAC +
Preference number: 5 (lower is better)
Translates to: QLPVSFAVLELVITSSRLVFLLS*CSLVLD
Trigger: GTCCAGAACTAAACTGCACAATGAAAGCAAGAAGAC...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAACTAGAGCCTTATCTTTaGAGAACTGACCGAACTGCT +
Preference number: 5 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKLEPYL*RTDRTA
Trigger: AGCAGTTCGGTCAGTTCTCAAAAGATAAGGCTCTAG...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGTCTTTGCTGGTGGGTTaGATGGCCTTAGGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: AISKAICSTHLTNVALKRSLLVG*MALGAS
Trigger: GGAGGCACCTAAGGCCATCAAACCCACCAGCAAAGA...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTGTTTTCCTGAACTCTTaGCTGGTGGGTTTGATGGCC +
Preference number: 5 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVVFLNS*LVGLMA
Trigger: GGCCATCAAACCCACCAGCAAAGAGTTCAGGAAAAC...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACGCAGAATGGTGCAGTTaGGGCAGATATAGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHAEWCS*GRYSLP
Trigger: GGGAAGACTATATCTGCCCAAACTGCACCATTCTGC...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAATCTTGCCACTTGGATTaGCAGCTTTCTCAATTCTAC +
Preference number: 5 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKSCHLD*QLSQFY
Trigger: GTAGAATTGAGAAAGCTGCAAATCCAAGTGGCAAGA...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp ATAAATGTACACCTGAAAATCAGATGCAACACTAACTTGCAAAGATTCCCACAACGGGGCCAATACATTTaGAGGCACCAGGCGCCTCTA +
Preference number: 5 (lower is better)
Translates to: INVHLKIRCNTNLQRFPQRGQYI*RHQAPL
Trigger: TAGAGGCGCCTGGTGCCTCAAAATGTATTGGCCCCG...TTGTGGGAATCTTTGCAAGTTAGTGTTGCATCTGATTTTCAGGTGTACATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAAGTGCAAATTTTACAGTaGAGATCGAAGAGGTGTGCG +
Preference number: 5 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQVQILQ*RSKRCA
Trigger: CGCACACCTCTTCGATCTCAACTGTAAAATTTGCAC...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGAGCGGTGATGCTGTTTaGGAAGCAGACGAAGCGGTG +
Preference number: 5 (lower is better)
Translates to: AISKAICSTHLTNVALKRSGDAV*EADEAV
Trigger: CACCGCTTCGTCTGCTTCCAAAACAGCATCACCGCT...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 90 bp GCTTTCTCAATTCTACCCTTTATCCCTTGGTCTTCGCTAGACTTCTaGTCTATTGTTCCTATACTTGTACAATCGGTGCCATCAGCATCT +
Preference number: 5 (lower is better)
Translates to: AFSILPFIPWSSLDF*SIVPILVQSVPSAS
Trigger: AGATGCTGATGGCACCGATTGTACAAGTATAGGAACAATAGAGCAGAAGTCTAGCGAAGACCAAGGGATAAAGGGTAGAATTGAGAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 90 bp TATCACAGGCTGGAAGATCTTGAGTTTCTTCTTGCCACTTGGATTTaGAGCTTTCTCAATTCTACCCTTTATCCCTTGGTCTTCGCTAGA +
Preference number: 5 (lower is better)
Translates to: YHRLEDLEFLLATWI*SFLNSTLYPLVFAR
Trigger: TCTAGCGAAGACCAAGGGATAAAGGGTAGAATTGAGAAAGCTGCAAATCCAAGTGGCAAGAAGAAACTCAAGATCTTCCAGCCTGTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS-3UTR CAA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAACTATTGTTCCTATACTaGTACAATCGGTGCCATCAG +
Preference number: 5 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQLLFLY*YNRCHQ
Trigger: CTGATGGCACCGATTGTACAAGTATAGGAACAATAG...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACAGTCTACCCTTTATCCCTaGGTCTTCGCTAGACTTCTG +
Preference number: 5 (lower is better)
Translates to: SHFRSTRKIHDKQETVSQSTLYP*VFARLL
Trigger: CAGAAGTCTAGCGAAGACCAAGGGATAAAGGGTAGA...CTGTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAATCTTGCCACTTGGATTaGCAGCTTTCTCAATTCTAC +
Preference number: 5 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQSCHLD*QLSQFY
Trigger: GTAGAATTGAGAAAGCTGCAAATCCAAGTGGCAAGA...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CAGCTTCCTGTCTCATTTGCAGTTCTTGAGCTAGTGATCACTAGTTCCCGTCTCCAGAGCTGTCATGCTTaGATTTTAAGTCTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: QLPVSFAVLELVITSSRLQSCHA*ILSLLS
Trigger: AGAAAGAAGACTTAAAATCAAAGCATGACAGCTCTG...GAGACGGGAACTAGTGATCACTAGCTCAAGAACTGCAAATGAGACAGGAAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCTCCCACCAATGTGAATaGTGTCAGGCAAATCCTCAC +
Preference number: 5 (lower is better)
Translates to: KSYLFNASYERGFKKGLCSHQCE*CQANPH
Trigger: GTGAGGATTTGCCTGACACAATTCACATTGGTGGGA...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGAGCAGAGTGGATACTaGGAGGGCTTCTTTTCCGAC +
Preference number: 5 (lower is better)
Translates to: AISKAICSTHLTNVALKREQSGY*EGFFSD
Trigger: GTCGGAAAAGAAGCCCTCCAAGTATCCACTCTGCTC...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACCAGAATGAAGATTTCTaGGGTCCTCATACTGGGCTG +
Preference number: 5 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHQNEDF*GPHTGL
Trigger: CAGCCCAGTATGAGGACCCAAGAAATCTTCATTCTG...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TCACTAGTTCCCGTCTCAGACTTTACACAAGTCTTGTTCCACGTTCAAGGACAAAAGTCATCGCTGTCATaGACTCTTTTCCACAAAATC +
Preference number: 5 (lower is better)
Translates to: SLVPVSDFTQVLFHVQGQKSSLS*TLFHKI
Trigger: GATTTTGTGGAAAAGAGTCAATGACAGCGATGACTT...TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTCTGAGACGGGAACTAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACGTGCAAATTTTACAGTaGAGATCGAAGAGGTGTGCG +
Preference number: 5 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHVQILQ*RSKRCA
Trigger: CGCACACCTCTTCGATCTCAACTGTAAAATTTGCAC...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TGGACCAACAAAACTCCTGATTATTCAAATCAAGGACTCCTCCCTGCCCCCAAACAGAGCTGTCATGCTTaGATTTTAAGTCTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: WTNKTPDYSNQGLLPAPKQSCHA*ILSLLS
Trigger: AGAAAGAAGACTTAAAATCAAAGCATGACAGCTCTG...TTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAATCAGGAGTTTTGTTGGTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTCGCTTTTCGTCCATCTaGTCTAACTCTCCACTGTTT +
Preference number: 5 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVRFSSI*SNSPLF
Trigger: AAACAGTGGAGAGTTAGACAAGATGGACGAAAAGCG...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp GCTATTTCAAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGTCCCCATGGGGATCCTaGCGTTCTTCAAATTGGGAT +
Preference number: 5 (lower is better)
Translates to: AISKAICSTHLTNVALKRSPWGS*RSSNWD
Trigger: ATCCCAATTTGAAGAACGCAAGGATCCCCATGGGGA...CCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTTGAAATAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 90 bp GTAATCAAAACACCCAGAGACAGGATACGCCTTAGTGACAAATTTTaGCACACTCTGCATGTTAATAAATCCTTTCCAAATGGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: VIKTPRDRIRLSDKF*HTLHVNKSFPNGAE
Trigger: CTCAGCACCATTTGGAAAGGATTTATTAACATGCAGAGTGTGGCAAAATTTGTCACTAAGGCGTATCCTGTCTCTGGGTGTTTTGATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS-3UTR CAA 90 bp ATAAATGTACACCTGAAAATCAGATGCAACACTAACTTGCAAAGATTCCCACAAGCAGAATGGTGCAGTTaGGGCAGATATAGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: INVHLKIRCNTNLQRFPQAEWCS*GRYSLP
Trigger: GGGAAGACTATATCTGCCCAAACTGCACCATTCTGC...TTGTGGGAATCTTTGCAAGTTAGTGTTGCATCTGATTTTCAGGTGTACATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
CDS-3UTR CAA 90 bp AAAAGCTATTTGTTCAACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTGCGTTTCTTCTTGCCACTaGGATTTGCAGCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: KSYLFNASYERGFKKGLCVSSCH*DLQLSQ
Trigger: TTGAGAAAGCTGCAAATCCAAGTGGCAAGAAGAAAC...GCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTTGAACAAATAGCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TTATTCAAATCAAGGACTCCTCCCTGCCCCCAAAGTACACTTAATTGGTTTGTTGTCTTCTTGCTTTCATaGTGCAGTTTAGTTCTGGAC +
Preference number: 5 (lower is better)
Translates to: LFKSRTPPCPQSTLNWFVVFLLS*CSLVLD
Trigger: GTCCAGAACTAAACTGCACAATGAAAGCAAGAAGAC...AACAAACCAATTAAGTGTACTTTGGGGGCAGGGAGGAGTCCTTGATTTGAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp CTTCACACTTCAGAAGTACTCGAAAAATACACGACAAGCAAGAGACTGTTTCACGACTTTACACAAGTCTaGTTCCACGTTCAAGGACAA +
Preference number: 5 (lower is better)
Translates to: LHTSEVLEKYTTSKRLFHDFTQV*FHVQGQ
Trigger: TTGTCCTTGAACGTGGAACAAGACTTGTGTAAAGTC...GTGAAACAGTCTCTTGCTTGTCGTGTATTTTTCGAGTACTTCTGAAGTGTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS-3UTR CAA 90 bp TTCACGCACACGCATTCATGTCAACAAGGACATCAGGAGAAGTTAACATTATACAAGTCATCGCTGTCATaGACTCTTTTCCACAAAATC +
Preference number: 5 (lower is better)
Translates to: FTHTHSCQQGHQEKLTLYKSSLS*TLFHKI
Trigger: GATTTTGTGGAAAAGAGTCAATGACAGCGATGACTT...GTATAATGTTAACTTCTCCTGATGTCCTTGTTGACATGAATGCGTGTGCGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS GCA 72 bp CTCTGCCCGGCCGGGGCGTCTAGGCCTGCGAGGCGGTaGCAGCGTCGGAGGCCCTCGAGGCCTCGGGCTTCG +
Preference number: 6 (lower is better)
Translates to: LCPAGASRPARR*QRRRPSRPRAS
Trigger: CGAAGCCCGAGGCCTCGAGGGCCTCCGACGCTGGCACCGCCTCGCAGGCCTAGACGCCCCGGCCGGGCAGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 72 bp CGGTTCCTGCTCCGCTCCCGGCTGCGGTCCCACTCCTaGCCCCGGTCGGCCTCGCGCTCTCGGTCGCGGTTG +
Preference number: 6 (lower is better)
Translates to: RFLLRSRLRSHS*PRSASRSRSRL
Trigger: CAACCGCGACCGAGAGCGCGAGGCCGACCGGGGCAAGGAGTGGGACCGCAGCCGGGAGCGGAGCAGGAACCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 90 bp TCGCGCTCTCGGTTCCTGCTCCGCTCCCGGCTGCGGTCCCACTCCTaGCCCCGGTCGGCCTCGCGCTCTCGGTCGCGGTTGGCGCTCCTC +
Preference number: 6 (lower is better)
Translates to: SRSRFLLRSRLRSHS*PRSASRSRSRLALL
Trigger: GAGGAGCGCCAACCGCGACCGAGAGCGCGAGGCCGACCGGGGCAAGGAGTGGGACCGCAGCCGGGAGCGGAGCAGGAACCGAGAGCGCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 72 bp TCCCCCTCACCGGTCTCAGTGGCCAGGCGCCTCGCCTaGCGGGGGTCCCTGTGGTTTGACGCCTGGCTGGCG +
Preference number: 6 (lower is better)
Translates to: SPSPVSVARRLA*RGSLWFDAWLA
Trigger: CGCCAGCCAGGCGTCAAACCACAGGGACCCCCGGCAGGCGAGGCGCCTGGCCACTGAGACCGGTGAGGGGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 72 bp TCCCTCTCACCGTCGTGCTGCAGCGGGAAGCCGGGCTaGAGGGCGCCGCAAGGCGGTGTGGGCAGCAGCACC +
Preference number: 6 (lower is better)
Translates to: SLSPSCCSGKPG*RAPQGGVGSST
Trigger: GGTGCTGCTGCCCACACCGCCTTGCGGCGCCCTGCAGCCCGGCTTCCCGCTGCAGCACGACGGTGAGAGGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 72 bp CCCGGGCAGGTGAAAGGGTCCCTCTCACCGTCGTGCTaGAGCGGGAAGCCGGGCTGCAGGGCGCCGCAAGGC +
Preference number: 6 (lower is better)
Translates to: PGQVKGSLSPSC*SGKPGCRAPQG
Trigger: GCCTTGCGGCGCCCTGCAGCCCGGCTTCCCGCTGCAGCACGACGGTGAGAGGGACCCTTTCACCTGCCCGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 72 bp GCTCCCTGTCCCTGGCCTTGTCTCGGTCCCGCTCTCTaGTCCGGGACCGGTCCCGGTCGCGCCTCCGGTCTC +
Preference number: 6 (lower is better)
Translates to: APCPWPCLGPAL*SGTGPGRASGL
Trigger: GAGACCGGAGGCGCGACCGGGACCGGTCCCGGAGCAGAGAGCGGGACCGAGACAAGGCCAGGGACAGGGAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp CGGGCAGGGCACCCTGGGCACCACGTGCCGAGAGCCTaGAGAGAGGCTCCCCCTCCCCCTCACCGGTCTCAG +
Preference number: 6 (lower is better)
Translates to: RAGHPGHHVPRA*REAPPPPHRSQ
Trigger: CTGAGACCGGTGAGGGGGAGGGGGAGCCTCTCTCCAGGCTCTCGGCACGTGGTGCCCAGGGTGCCCTGCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 90 bp GCCCTCGAGGCCTCGGGCTTCGGGTCCCGAGCGCTCTCTTTGCTCTaGCTCCGGTCCTTGCGGTCGCGGCCCCGCTCCCTGTCCCTGGCC +
Preference number: 6 (lower is better)
Translates to: ALEASGFGSRALSLL*LRSLRSRPRSLSLA
Trigger: GGCCAGGGACAGGGAGCGGGGCCGCGACCGCAAGGACCGGAGCAAGAGCAAAGAGAGCGCTCGGGACCCGAAGCCCGAGGCCTCGAGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 90 bp CGGTCCCACTCCTTGCCCCGGTCGGCCTCGCGCTCTCGGTCGCGGTaGGCGCTCCTCTCCCGGTTTCTGTCCCAGTCCCGGCTGGAGTCC +
Preference number: 6 (lower is better)
Translates to: RSHSLPRSASRSRSR*ALLSRFLSQSRLES
Trigger: GGACTCCAGCCGGGACTGGGACAGAAACCGGGAGAGGAGCGCCAACCGCGACCGAGAGCGCGAGGCCGACCGGGGCAAGGAGTGGGACCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp GGACTGGCATGGGCGCCTGGCCCACGAGGCCACCCCTaGAAGCATCTCTCTCGGGCAGGGCACCCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: GLAWAPGPRGHP*KHLSRAGHPGH
Trigger: GTGCCCAGGGTGCCCTGCCCGAGAGAGATGCTTCCAGGGGTGGCCTCGTGGGCCAGGCGCCCATGCCAGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 72 bp CTCGAGGCCTCGGGCTTCGGGTCCCGAGCGCTCTCTTaGCTCTTGCTCCGGTCCTTGCGGTCGCGGCCCCGC +
Preference number: 6 (lower is better)
Translates to: LEASGFGSRALS*LLLRSLRSRPR
Trigger: GCGGGGCCGCGACCGCAAGGACCGGAGCAAGAGCAAAGAGAGCGCTCGGGACCCGAAGCCCGAGGCCTCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 90 bp TTGGCGCTCCTCTCCCGGTTTCTGTCCCAGTCCCGGCTGGAGTCCTaGTCCCGGTGTCGGTCCCACTCCCGGGGCCGGTCCCAGTCCCGC +
Preference number: 6 (lower is better)
Translates to: LALLSRFLSQSRLES*SRCRSHSRGRSQSR
Trigger: GCGGGACTGGGACCGGCCCCGGGAGTGGGACCGACACCGGGACAAGGACTCCAGCCGGGACTGGGACAGAAACCGGGAGAGGAGCGCCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS TCA 72 bp GTCTGGGCGGGATGCTGCGGAGGCCACGGCTGTGCATaGACTGCTTGGAGCGGTCCTGGGGTCCCGGCCGGA +
Preference number: 6 (lower is better)
Translates to: VWAGCCGGHGCA*TAWSGPGVPAG
Trigger: TCCGGCCGGGACCCCAGGACCGCTCCAAGCAGTTCATGCACAGCCGTGGCCTCCGCAGCATCCCGCCCAGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 72 bp CTCCTCCTGCCGCGGCGCCGCGCAATGGTCAGGAACTaGTCCACGCGCTCAGTGCGCTTGGGCTGCCTCCCA +
Preference number: 6 (lower is better)
Translates to: LLLPRRRAMVRN*STRSVRLGCLP
Trigger: TGGGAGGCAGCCCAAGCGCACTGAGCGCGTGGAGCAGTTCCTGACCATTGCGCGGCGCCGCGGCAGGAGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 72 bp GGGGGCCGCTTCTGGTCTCAGAAGCGCTTTCCACGCTaGCCTCGGAGGCTGTCTCGGCGTCTGTGGCGGGGC +
Preference number: 6 (lower is better)
Translates to: GGRFWSQKRFPR*PRRLSRRLWRG
Trigger: GCCCCGCCACAGACGCCGAGACAGCCTCCGAGGGCAGCGTGGAAAGCGCTTCTGAGACCAGAAGCGGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 72 bp GAGGCAGCCGTTGCCGCTGCAGGTGCCGGTCCGGCCTaGCTGGCAGCTGAAGCACCACTCGATGGGGTAGCG +
Preference number: 6 (lower is better)
Translates to: EAAVAAAGAGPA*LAAEAPLDGVA
Trigger: CGCTACCCCATCGAGTGGTGCTTCAGCTGCCAGGCAGGCCGGACCGGCACCTGCAGCGGCAACGGCTGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 72 bp GGCGGGATGCTGCGGAGGCCACGGCTGTGCATGAACTaGTTGGAGCGGTCCTGGGGTCCCGGCCGGACACTG +
Preference number: 6 (lower is better)
Translates to: GGMLRRPRLCMN*LERSWGPGRTL
Trigger: CAGTGTCCGGCCGGGACCCCAGGACCGCTCCAAGCAGTTCATGCACAGCCGTGGCCTCCGCAGCATCCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 72 bp AGCATCTCTCTCGGGCAGGGCACCCTGGGCACCACGTaGCGAGAGCCTGGAGAGAGGCTCCCCCTCCCCCTC +
Preference number: 6 (lower is better)
Translates to: SISLGQGTLGTT*REPGERLPLPL
Trigger: GAGGGGGAGGGGGAGCCTCTCTCCAGGCTCTCGGCACGTGGTGCCCAGGGTGCCCTGCCCGAGAGAGATGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 72 bp AACCCCGGGCAGGTGAAAGGGTCCCTCTCACCGTCGTaGTGCAGCGGGAAGCCGGGCTGCAGGGCGCCGCAA +
Preference number: 6 (lower is better)
Translates to: NPGQVKGSLSPS*CSGKPGCRAPQ
Trigger: TTGCGGCGCCCTGCAGCCCGGCTTCCCGCTGCAGCACGACGGTGAGAGGGACCCTTTCACCTGCCCGGGGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 72 bp CCTCGGGCTTCGGGTCCCGAGCGCTCTCTTTGCTCTTaGTCCGGTCCTTGCGGTCGCGGCCCCGCTCCCTGT +
Preference number: 6 (lower is better)
Translates to: PRASGPERSLCS*SGPCGRGPAPC
Trigger: ACAGGGAGCGGGGCCGCGACCGCAAGGACCGGAGCAAGAGCAAAGAGAGCGCTCGGGACCCGAAGCCCGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 72 bp TCGAGGCCTCGGGCTTCGGGTCCCGAGCGCTCTCTTTaGTCTTGCTCCGGTCCTTGCGGTCGCGGCCCCGCT +
Preference number: 6 (lower is better)
Translates to: SRPRASGPERSL*SCSGPCGRGPA
Trigger: AGCGGGGCCGCGACCGCAAGGACCGGAGCAAGAGCAAAGAGAGCGCTCGGGACCCGAAGCCCGAGGCCTCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 72 bp CTCTCCCGGTTTCTGTCCCAGTCCCGGCTGGAGTCCTaGTCCCGGTGTCGGTCCCACTCCCGGGGCCGGTCC +
Preference number: 6 (lower is better)
Translates to: LSRFLSQSRLES*SRCRSHSRGRS
Trigger: GGACCGGCCCCGGGAGTGGGACCGACACCGGGACAAGGACTCCAGCCGGGACTGGGACAGAAACCGGGAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 72 bp GCCGCGCAATGGTCAGGAACTGCTCCACGCGCTCAGTaGGCTTGGGCTGCCTCCCACTGCGCCGCAGGGACA +
Preference number: 6 (lower is better)
Translates to: AAQWSGTAPRAQ*AWAASHCAAGT
Trigger: TGTCCCTGCGGCGCAGTGGGAGGCAGCCCAAGCGCACTGAGCGCGTGGAGCAGTTCCTGACCATTGCGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 72 bp TGCTGTCTGGGCGGGATGCTGCGGAGGCCACGGCTGTaGATGAACTGCTTGGAGCGGTCCTGGGGTCCCGGC +
Preference number: 6 (lower is better)
Translates to: CCLGGMLRRPRL*MNCLERSWGPG
Trigger: GCCGGGACCCCAGGACCGCTCCAAGCAGTTCATGCACAGCCGTGGCCTCCGCAGCATCCCGCCCAGACAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 72 bp GTATTCGTGGCCTTTCCCCTCTCGGAAGTCGGCCGATaGCCACTGTCCGTCGGCCTCGGGGCCCTGTCCGGG +
Preference number: 6 (lower is better)
Translates to: VFVAFPLSEVGR*PLSVGLGALSG
Trigger: CCCGGACAGGGCCCCGAGGCCGACGGACAGTGGGCATCGGCCGACTTCCGAGAGGGGAAAGGCCACGAATAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp CGGCTCCCACCAAAGCAGCGGAGCCAGGGAACTTCTTaGAGGCAGCCGTTGCCGCTGCAGGTGCCGGTCCGG +
Preference number: 6 (lower is better)
Translates to: RLPPKQRSQGTS*RQPLPLQVPVR
Trigger: CCGGACCGGCACCTGCAGCGGCAACGGCTGCCTCCAAGAAGTTCCCTGGCTCCGCTGCTTTGGTGGGAGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 72 bp CCACCCCTGGAAGCATCTCTCTCGGGCAGGGCACCCTaGGCACCACGTGCCGAGAGCCTGGAGAGAGGCTCC +
Preference number: 6 (lower is better)
Translates to: PPLEASLSGRAP*APRAESLERGS
Trigger: GGAGCCTCTCTCCAGGCTCTCGGCACGTGGTGCCCAGGGTGCCCTGCCCGAGAGAGATGCTTCCAGGGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp TGGCGCTCCTCTCCCGGTTTCTGTCCCAGTCCCGGCTaGAGTCCTTGTCCCGGTGTCGGTCCCACTCCCGGG +
Preference number: 6 (lower is better)
Translates to: WRSSPGFCPSPG*SPCPGVGPTPG
Trigger: CCCGGGAGTGGGACCGACACCGGGACAAGGACTCCAGCCGGGACTGGGACAGAAACCGGGAGAGGAGCGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 72 bp CGGTGGAGGAAGCTGCCGTGGAGGCTGCCGCTGCTGTaGTGGCTGCTGTGGCTGGGCTGGGGGCTGCAGGTT +
Preference number: 6 (lower is better)
Translates to: RWRKLPWRLPLL*WLLWLGWGLQV
Trigger: AACCTGCAGCCCCCAGCCCAGCCACAGCAGCCACAACAGCAGCGGCAGCCTCCACGGCAGCTTCCTCCACCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 72 bp CGGCCCTGGGCGTCGGGCTCCTCCAGCGGCTTCTCTTaGGGCCCCACGTCAAACCGCTCTCTCTGCCTCCCT +
Preference number: 6 (lower is better)
Translates to: RPWASGSSSGFS*GPTSNRSLCLP
Trigger: AGGGAGGCAGAGAGAGCGGTTTGACGTGGGGCCCAAAGAGAAGCCGCTGGAGGAGCCCGACGCCCAGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 90 bp TCCAACGCCTCCGCAGCAGCCATCTTGCCAGAGGGCCGACGCCTTTaGACTCTGGCGCCAACCCGTAGTGCGTGGTCGCCGCGAGGGGAG +
Preference number: 6 (lower is better)
Translates to: SNASAAAILPEGRRL*TLAPTRSAWSPRGE
Trigger: CTCCCCTCGCGGCGACCACGCACTACGGGTTGGCGCCAGAGTCAAAAGGCGTCGGCCCTCTGGCAAGATGGCTGCTGCGGAGGCGTTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000370371.8
CDS CAA 90 bp TCGGACGCCCGGCCCTGGGCGTCGGGCTCCTCCAGCGGCTTCTCTTaGGGCCCCACGTCAAACCGCTCTCTCTGCCTCCCTTCGAAAGTC +
Preference number: 6 (lower is better)
Translates to: SDARPWASGSSSGFS*GPTSNRSLCLPSKV
Trigger: GACTTTCGAAGGGAGGCAGAGAGAGCGGTTTGACGTGGGGCCCAAAGAGAAGCCGCTGGAGGAGCCCGACGCCCAGGGCCGGGCGTCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS TCA 72 bp CCGCAGCAGCCATCTTGCCAGAGGGCCGACGCCTTTTaGCTCTGGCGCCAACCCGTAGTGCGTGGTCGCCGC +
Preference number: 6 (lower is better)
Translates to: PQQPSCQRADAF*LWRQPVVRGRR
Trigger: GCGGCGACCACGCACTACGGGTTGGCGCCAGAGTCAAAAGGCGTCGGCCCTCTGGCAAGATGGCTGCTGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000370371.8
CDS TCA 72 bp CGAGAGCCTTGTCCTGCGACGCGAACCCCGGGCAGGTaGAAGGGTCCCTCTCACCGTCGTGCTGCAGCGGGA +
Preference number: 6 (lower is better)
Translates to: REPCPATRTPGR*KGPSHRRAAAG
Trigger: TCCCGCTGCAGCACGACGGTGAGAGGGACCCTTTCACCTGCCCGGGGTTCGCGTCGCAGGACAAGGCTCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 72 bp GGGTGGCGGCTCCAGTGGGTCAGCCTCCGCGTCCCCTaGGCCCTCTCGCTTGGCGATAGTGGTCCTTCGAAA +
Preference number: 6 (lower is better)
Translates to: GWRLQWVSLRVP*ALSLGDSGPSK
Trigger: TTTCGAAGGACCACTATCGCCAAGCGAGAGGGCGCAGGGGACGCGGAGGCTGACCCACTGGAGCCGCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 72 bp AGACAGGCATGCTCCTCCTGCCGCGGCGCCGCGCAATaGTCAGGAACTGCTCCACGCGCTCAGTGCGCTTGG +
Preference number: 6 (lower is better)
Translates to: RQACSSCRGAAQ*SGTAPRAQCAW
Trigger: CCAAGCGCACTGAGCGCGTGGAGCAGTTCCTGACCATTGCGCGGCGCCGCGGCAGGAGGAGCATGCCTGTCT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 72 bp GGTGGTGGAGACATCAAGGCGTCCGACACCGAGAAGTaGGCCATGGAGACCCCGACGGCGGCCCTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: GGGDIKASDTEK*AMETPTAALCC
Trigger: GCAGCAGAGGGCCGCCGTCGGGGTCTCCATGGCCCACTTCTCGGTGTCGGACGCCTTGATGTCTCCACCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 90 bp GGATCTAACAACGGAGGTGCCGGCACCCCGTCCTCTGCTGTGGTTTaGGGCTCCTGGGGGAGACCTGCGGTGGACCCGGGAGGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: GSNNGGAGTPSSAVV*GSWGRPAVDPGGSL
Trigger: CAGAGAGCCTCCCGGGTCCACCGCAGGTCTCCCCCAGGAGCCCAAAACCACAGCAGAGGACGGGGTGCCGGCACCTCCGTTGTTAGATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS TCA 72 bp CTTTCCACCTCGTGGCGCCGCCCTCGCTCCACAAGCTaGGTGTCGAAGGCCCTCTCCGGGTCGTACTCCTCC +
Preference number: 6 (lower is better)
Translates to: LSTSWRRPRSTS*VSKALSGSYSS
Trigger: GGAGGAGTACGACCCGGAGAGGGCCTTCGACACTCAGCTTGTGGAGCGAGGGCGGCGCCACGAGGTGGAAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 72 bp GCTTCGGCACATCCTGTCTGGCTTCCACCATGTGGGTaGTGTCTGGGCGGGATGCTGCGGAGGCCACGGCTG +
Preference number: 6 (lower is better)
Translates to: ASAHPVWLPPCG*CLGGMLRRPRL
Trigger: CAGCCGTGGCCTCCGCAGCATCCCGCCCAGACAGCACCCACATGGTGGAAGCCAGACAGGATGTGCCGAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 72 bp GGGTCCTCATACTGGGCTGAGCCGAGAGCCTTGTCCTaGGACGCGAACCCCGGGCAGGTGAAAGGGTCCCTC +
Preference number: 6 (lower is better)
Translates to: GSSYWAEPRALS*DANPGQVKGSL
Trigger: GAGGGACCCTTTCACCTGCCCGGGGTTCGCGTCGCAGGACAAGGCTCTCGGCTCAGCCCAGTATGAGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 72 bp AAAGGCGCGCCGCCTCTGCTTCCCAGAAATGGGGCTTaGTCTGTCCCTTCAAACTGGGCGGGGGCGCCCGTC +
Preference number: 6 (lower is better)
Translates to: KGAPPLLPRNGA*SVPSNWAGAPV
Trigger: GACGGGCGCCCCCGCCCAGTTTGAAGGGACAGAGCAAGCCCCATTTCTGGGAAGCAGAGGCGGCGCGCCTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp TTTCCACGCTGCCCTCGGAGGCTGTCTCGGCGTCTGTaGCGGGGCAGGACGTGGGCTCACCAGAATCCTCCA +
Preference number: 6 (lower is better)
Translates to: FPRCPRRLSRRL*RGRTWAHQNPP
Trigger: TGGAGGATTCTGGTGAGCCCACGTCCTGCCCCGCCACAGACGCCGAGACAGCCTCCGAGGGCAGCGTGGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 72 bp GGACCCTCCTCCCGGCGCTTCTTCCGCAGGCGACTCTaGATCCCTTTCAGGGGCCTCTCAGTGGGCTCCTGT +
Preference number: 6 (lower is better)
Translates to: GPSSRRFFRRRL*IPFRGLSVGSC
Trigger: ACAGGAGCCCACTGAGAGGCCCCTGAAAGGGATCCAGAGTCGCCTGCGGAAGAAGCGCCGGGAGGAGGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 72 bp GGGAAGAGGCTGGCTCTTTTTCCTCCGGGACTGGCATaGGCGCCTGGCCCACGAGGCCACCCCTGGAAGCAT +
Preference number: 6 (lower is better)
Translates to: GKRLALFPPGLA*APGPRGHPWKH
Trigger: ATGCTTCCAGGGGTGGCCTCGTGGGCCAGGCGCCCATGCCAGTCCCGGAGGAAAAAGAGCCAGCCTCTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 72 bp TCCGCAGCAGCCATCTTGCCAGAGGGCCGACGCCTTTaGACTCTGGCGCCAACCCGTAGTGCGTGGTCGCCG +
Preference number: 6 (lower is better)
Translates to: SAAAILPEGRRL*TLAPTRSAWSP
Trigger: CGGCGACCACGCACTACGGGTTGGCGCCAGAGTCAAAAGGCGTCGGCCCTCTGGCAAGATGGCTGCTGCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000370371.8
CDS CAA 72 bp GAAAGGCGCGCCGCCTCTGCTTCCCAGAAATGGGGCTaGCTCTGTCCCTTCAAACTGGGCGGGGGCGCCCGT +
Preference number: 6 (lower is better)
Translates to: ERRAASASQKWG*LCPFKLGGGAR
Trigger: ACGGGCGCCCCCGCCCAGTTTGAAGGGACAGAGCAAGCCCCATTTCTGGGAAGCAGAGGCGGCGCGCCTTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 72 bp ATCGCTCGCCCACGACGGCGTGCTGCTCTCACAAGCTaGTTCCTTCCCGAGTGCTTCACTCCGCGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: IARPRRRAALTS*FLPECFTPRRD
Trigger: GTCCCTGCGCGGAGTGAAGCACTCGGGAAGGAAGCAGCTTGTGAGAGCAGCACGCCGTCGTGGGCGAGCGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 72 bp ATCCTCGGGGTCATAGGCCACCTCTTCCCGCTCGGCTaGAGCTGCTTCAGGAGCCCTTTCCACCTCGTGGCG +
Preference number: 6 (lower is better)
Translates to: ILGVIGHLFPLG*SCFRSPFHLVA
Trigger: CGCCACGAGGTGGAAAGGGCTCCTGAAGCAGCTGCAGCCGAGCGGGAAGAGGTGGCCTATGACCCCGAGGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp CAGGGGGACAGGTCTTCCAGCGGGGAGGGCTCGGGATaGCCATCTCCTGGAGGCCCAGGGAAATACGTTCTG +
Preference number: 6 (lower is better)
Translates to: QGDRSSSGEGSG*PSPGGPGKYVL
Trigger: CAGAACGTATTTCCCTGGGCCTCCAGGAGATGGCCATCCCGAGCCCTCCCCGCTGGAAGACCTGTCCCCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 72 bp GGAAGGGATGGGCCCCTTCTGGGCTCCGAATCTGGCTaGCGGAGGCCCTCGTGGCCCATCGTTAGAAGCGAT +
Preference number: 6 (lower is better)
Translates to: GRDGPLLGSESG*RRPSWPIVRSD
Trigger: ATCGCTTCTAACGATGGGCCACGAGGGCCTCCGCCAGCCAGATTCGGAGCCCAGAAGGGGCCCATCCCTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 90 bp CCCGGTTCCAGATTTCCGCGCTCCAACGCCTCCGCAGCAGCCATCTaGCCAGAGGGCCGACGCCTTTTGACTCTGGCGCCAACCCGTAGT +
Preference number: 6 (lower is better)
Translates to: PGSRFPRSNASAAAI*PEGRRLLTLAPTRS
Trigger: ACTACGGGTTGGCGCCAGAGTCAAAAGGCGTCGGCCCTCTGGCAAGATGGCTGCTGCGGAGGCGTTGGAGCGCGGAAATCTGGAACCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000370371.8
CDS CAA 90 bp TCCGAACTGGAAAGGCGCGCCGCCTCTGCTTCCCAGAAATGGGGCTaGCTCTGTCCCTTCAAACTGGGCGGGGGCGCCCGTCACCTCGTT +
Preference number: 6 (lower is better)
Translates to: SELERRAASASQKWG*LCPFKLGGGARHLV
Trigger: AACGAGGTGACGGGCGCCCCCGCCCAGTTTGAAGGGACAGAGCAAGCCCCATTTCTGGGAAGCAGAGGCGGCGCGCCTTTCCAGTTCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS TCA 72 bp TGGTGCCACTCCTCGTGGTCCACCAAGGTAAGAGGGTaGGGGGCCTCTGCTGTCCCCATAAGGAGGTGGCCC +
Preference number: 6 (lower is better)
Translates to: WCHSSWSTKVRG*GASAVPIRRWP
Trigger: GGGCCACCTCCTTATGGGGACAGCAGAGGCCCCTCACCCTCTTACCTTGGTGGACCACGAGGAGTGGCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 72 bp AAGTGGGCCATGGAGACCCCGACGGCGGCCCTCTGCTaGCTGAGAGCTTCTTCTTGCTCCTCCAGCTGTCTC +
Preference number: 6 (lower is better)
Translates to: KWAMETPTAALC*LRASSCSSSCL
Trigger: GAGACAGCTGGAGGAGCAAGAAGAAGCTCTCAGGCAGCAGAGGGCCGCCGTCGGGGTCTCCATGGCCCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp CCTTCACAGCTGTGGAAGCAGACTGGGGGCCGCTTCTaGTCTCAGAAGCGCTTTCCACGCTGCCCTCGGAGG +
Preference number: 6 (lower is better)
Translates to: PSQLWKQTGGRF*SQKRFPRCPRR
Trigger: CCTCCGAGGGCAGCGTGGAAAGCGCTTCTGAGACCAGAAGCGGCCCCCAGTCTGCTTCCACAGCTGTGAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 72 bp ACACAACCCCCTGATCGTTCTCGGGCTCCTGCTTACTaGGCAGGACGCCCTCCACAGTGTCACTGGCCTCGG +
Preference number: 6 (lower is better)
Translates to: TQPPDRSRAPAY*AGRPPQCHWPR
Trigger: CCGAGGCCAGTGACACTGTGGAGGGCGTCCTGCCCAGTAAGCAGGAGCCCGAGAACGATCAGGGGGTTGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 72 bp ATGGGGCCCTCTTGGGCCCACGAAATGACCAGGGGGTaGTCCTCTCTGACCTCCAAACTGAGAGGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: MGPSWAHEMTRG*SSLTSKLRGRG
Trigger: CCCCCTCCCTCTCAGTTTGGAGGTCAGAGAGGACCACCCCCTGGTCATTTCGTGGGCCCAAGAGGGCCCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 72 bp AGATTTCCGCGCTCCAACGCCTCCGCAGCAGCCATCTaGCCAGAGGGCCGACGCCTTTTGACTCTGGCGCCA +
Preference number: 6 (lower is better)
Translates to: RFPRSNASAAAI*PEGRRLLTLAP
Trigger: TGGCGCCAGAGTCAAAAGGCGTCGGCCCTCTGGCAAGATGGCTGCTGCGGAGGCGTTGGAGCGCGGAAATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000370371.8
CDS CAA 90 bp CTGCTGAGGCTGAATGCCCCTGGGACCTGGCATAAAGTTAGGCGCTaGGCCTCTGGGTCCTTCAAACTGGTTGGGATGAGGGCCCCGGGC +
Preference number: 6 (lower is better)
Translates to: LLRLNAPGTWHKVRR*ASGSFKLVGMRAPG
Trigger: GCCCGGGGCCCTCATCCCAACCAGTTTGAAGGACCCAGAGGCCAAGCGCCTAACTTTATGCCAGGTCCCAGGGGCATTCAGCCTCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 72 bp CGGCGTGCTGCTCTCACAAGCTGCTTCCTTCCCGAGTaGTTCACTCCGCGCAGGGACCACCACTGCCTTCTT +
Preference number: 6 (lower is better)
Translates to: RRAALTSCFLPE*FTPRRDHHCLL
Trigger: AAGAAGGCAGTGGTGGTCCCTGCGCGGAGTGAAGCACTCGGGAAGGAAGCAGCTTGTGAGAGCAGCACGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 72 bp AACGCATCTTACGAACGTGGCTTTAAAAAGGGTCTCTaGCCGGCCGGGGCGTCTAGGCCTGCGAGGCGGTGC +
Preference number: 6 (lower is better)
Translates to: NASYERGFKKGL*PAGASRPARRC
Trigger: GCACCGCCTCGCAGGCCTAGACGCCCCGGCCGGGCAGAGACCCTTTTTAAAGCCACGTTCGTAAGATGCGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp CATAGCCCCAAGGCGTCCTGGGGCTGGCGAGGCCATTaGAACAGAAGGTACCACTGGCTTCCTTACGGCTCC +
Preference number: 6 (lower is better)
Translates to: HSPKASWGWRGH*NRRYHWLPYGS
Trigger: GGAGCCGTAAGGAAGCCAGTGGTACCTTCTGTTCCAATGGCCTCGCCAGCCCCAGGACGCCTTGGGGCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 72 bp GCCGGCGCTTACCTGGTCCCTCAAAGGGCAAGAGTTTaGATGGAACAGGGTCCTGGGCGCTCAGCGGGATCA +
Preference number: 6 (lower is better)
Translates to: AGAYLVPQRARV*MEQGPGRSAGS
Trigger: TGATCCCGCTGAGCGCCCAGGACCCTGTTCCATCCAAACTCTTGCCCTTTGAGGGACCAGGTAAGCGCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS CAA 72 bp TTTCTTGGGTCCTCATACTGGGCTGAGCCGAGAGCCTaGTCCTGCGACGCGAACCCCGGGCAGGTGAAAGGG +
Preference number: 6 (lower is better)
Translates to: FLGSSYWAEPRA*SCDANPGQVKG
Trigger: CCCTTTCACCTGCCCGGGGTTCGCGTCGCAGGACAAGGCTCTCGGCTCAGCCCAGTATGAGGACCCAAGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 72 bp AGCCGGCGCTTACCTGGTCCCTCAAAGGGCAAGAGTTaGGATGGAACAGGGTCCTGGGCGCTCAGCGGGATC +
Preference number: 6 (lower is better)
Translates to: SRRLPGPSKGKS*DGTGSWALSGI
Trigger: GATCCCGCTGAGCGCCCAGGACCCTGTTCCATCCAAACTCTTGCCCTTTGAGGGACCAGGTAAGCGCCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS GCA 72 bp ACTGGCGGAGAGTCCTCCAGATCGGGGATGGCCTCCTaGCTGGGGGCCGTCTTCTTGCTTTCATTGTGCAGT +
Preference number: 6 (lower is better)
Translates to: TGGESSRSGMAS*LGAVFLLSLCS
Trigger: ACTGCACAATGAAAGCAAGAAGACGGCCCCCAGGCAGGAGGCCATCCCCGATCTGGAGGACTCTCCGCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 72 bp GAGGCTGGTCGTTCCTTCACAGCTGTGGAAGCAGACTaGGGGCCGCTTCTGGTCTCAGAAGCGCTTTCCACG +
Preference number: 6 (lower is better)
Translates to: EAGRSFTAVEAD*GPLLVSEALST
Trigger: CGTGGAAAGCGCTTCTGAGACCAGAAGCGGCCCCCAGTCTGCTTCCACAGCTGTGAAGGAACGACCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 72 bp CGGAGCCTGGAGGGGCTGTTTTCTTTGAGGCTGCCATaGCTGCCGCTTTCTCCTCGGACCTCCTGTCTTCCT +
Preference number: 6 (lower is better)
Translates to: RSLEGLFSLRLP*LPLSPRTSCLP
Trigger: AGGAAGACAGGAGGTCCGAGGAGAAAGCGGCAGCCATGGCAGCCTCAAAGAAAACAGCCCCTCCAGGCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 72 bp TGGTGCAGCACTCATAGCCCCAAGGCGTCCTGGGGCTaGCGAGGCCATTGGAACAGAAGGTACCACTGGCTT +
Preference number: 6 (lower is better)
Translates to: WCSTHSPKASWG*RGHWNRRYHWL
Trigger: AAGCCAGTGGTACCTTCTGTTCCAATGGCCTCGCCAGCCCCAGGACGCCTTGGGGCTATGAGTGCTGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 72 bp AATCCGACACTGGCGGAGAGTCCTCCAGATCGGGGATaGCCTCCTGCCTGGGGGCCGTCTTCTTGCTTTCAT +
Preference number: 6 (lower is better)
Translates to: NPTLAESPPDRG*PPAWGPSSCFH
Trigger: ATGAAAGCAAGAAGACGGCCCCCAGGCAGGAGGCCATCCCCGATCTGGAGGACTCTCCGCCAGTGTCGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 72 bp CCTGGGGGAGACCTGCGGTGGACCCGGGAGGCTCTCTaGCGGACGGGTCGAATGATTTCTTCTTTCCAAAGA +
Preference number: 6 (lower is better)
Translates to: PGGDLRWTREAL*RTGRMISSFQR
Trigger: TCTTTGGAAAGAAGAAATCATTCGACCCGTCCGCCAGAGAGCCTCCCGGGTCCACCGCAGGTCTCCCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp CCCTCGTGGCCCATCGTTAGAAGCGATATTCTCTTCTaGAAACGGAGGGGCTGGCCCCCTTGGTCCCGGGAA +
Preference number: 6 (lower is better)
Translates to: PSWPIVRSDILF*KRRGWPPWSRE
Trigger: TTCCCGGGACCAAGGGGGCCAGCCCCTCCGTTTCCAGAAGAGAATATCGCTTCTAACGATGGGCCACGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp CCGGGCAGTTTCAAACTGACTAGGATGGGGCCCTCTTaGGCCCACGAAATGACCAGGGGGTGGTCCTCTCTG +
Preference number: 6 (lower is better)
Translates to: PGSFKLTRMGPS*AHEMTRGWSSL
Trigger: CAGAGAGGACCACCCCCTGGTCATTTCGTGGGCCCAAGAGGGCCCCATCCTAGTCAGTTTGAAACTGCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 72 bp GCTGCGCCACGTGACAGCACCCGGGGCCAATACATTTaGAGGCACCAGGCGCCTCTATCACAGGCTGGAAGA +
Preference number: 6 (lower is better)
Translates to: AAPRDSTRGQYI*RHQAPLSQAGR
Trigger: TCTTCCAGCCTGTGATAGAGGCGCCTGGTGCCTCAAAATGTATTGGCCCCGGGTGCTGTCACGTGGCGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS TCA 72 bp TCTCTGTCATCTTTCCCAGCCTGGGACACAACCCCCTaGTCGTTCTCGGGCTCCTGCTTACTGGGCAGGACG +
Preference number: 6 (lower is better)
Translates to: SLSSFPAWDTTP*SFSGSCLLGRT
Trigger: CGTCCTGCCCAGTAAGCAGGAGCCCGAGAACGATCAGGGGGTTGTGTCCCAGGCTGGGAAAGATGACAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 72 bp GAAGACTTCTTTGGCACGAGGTTTCTAGGTGCAGGCTaGTTGCCCACCGCGGAGCCTGGAGGGGCTGTTTTC +
Preference number: 6 (lower is better)
Translates to: EDFFGTRFLGAG*LPTAEPGGAVF
Trigger: GAAAACAGCCCCTCCAGGCTCCGCGGTGGGCAAGCAGCCTGCACCTAGAAACCTCGTGCCAAAGAAGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 72 bp AGCAAAAGAAGACTTCTTTGGCACGAGGTTTCTAGGTaGAGGCTGCTTGCCCACCGCGGAGCCTGGAGGGGC +
Preference number: 6 (lower is better)
Translates to: SKRRLLWHEVSR*RLLAHRGAWRG
Trigger: GCCCCTCCAGGCTCCGCGGTGGGCAAGCAGCCTGCACCTAGAAACCTCGTGCCAAAGAAGTCTTCTTTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 72 bp GTGCAGCCGGTGTCTGTGATCAGCTTAACACAAAGCTaGAACTCCCAGTCCTGGACAGGCCCAGGGGATGGC +
Preference number: 6 (lower is better)
Translates to: VQPVSVISLTQS*NSQSWTGPGDG
Trigger: GCCATCCCCTGGGCCTGTCCAGGACTGGGAGTTGCAGCTTTGTGTTAAGCTGATCACAGACACCGGCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS CCA 72 bp AGGTGTGGTGCTGACAGCCGCGTCTGCAGAGCAGAGTaGATACTTGGAGGGCTTCTTTTCCGACTGCGGGAC +
Preference number: 6 (lower is better)
Translates to: RCGADSRVCRAE*ILGGLLFRLRD
Trigger: GTCCCGCAGTCGGAAAAGAAGCCCTCCAAGTATCCACTCTGCTCTGCAGACGCGGCTGTCAGCACCACACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp GAGTCTGCAGGATGTGCTCCAGCGGTGATGCTGTTTTaGAAGCAGACGAAGCGGTGGAGGAAGCTGCCGTGG +
Preference number: 6 (lower is better)
Translates to: ESAGCAPAVMLF*KQTKRWRKLPW
Trigger: CCACGGCAGCTTCCTCCACCGCTTCGTCTGCTTCCAAAACAGCATCACCGCTGGAGCACATCCTGCAGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp GAACAGCTCTGCCTTGGGCAAGGACGACTTTGGTGGTaGAGACATCAAGGCGTCCGACACCGAGAAGTGGGC +
Preference number: 6 (lower is better)
Translates to: EQLCLGQGRLWW*RHQGVRHREVG
Trigger: GCCCACTTCTCGGTGTCGGACGCCTTGATGTCTCCACCACCAAAGTCGTCCTTGCCCAAGGCAGAGCTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp TGGGCCTCACCTCCACCCAGAAAGCCGGCGCTTACCTaGTCCCTCAAAGGGCAAGAGTTTGGATGGAACAGG +
Preference number: 6 (lower is better)
Translates to: WASPPPRKPALT*SLKGQEFGWNR
Trigger: CCTGTTCCATCCAAACTCTTGCCCTTTGAGGGACCAGGTAAGCGCCGGCTTTCTGGGTGGAGGTGAGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395340.5
CDS CAA 90 bp GGAGGTGTGGTGCTGACAGCCGCGTCTGCAGAGCAGAGTGGATACTaGGAGGGCTTCTTTTCCGACTGCGGGACTGTGGCTACTTTTGGA +
Preference number: 6 (lower is better)
Translates to: GGVVLTAASAEQSGY*EGFFSDCGTVATFG
Trigger: TCCAAAAGTAGCCACAGTCCCGCAGTCGGAAAAGAAGCCCTCCAAGTATCCACTCTGCTCTGCAGACGCGGCTGTCAGCACCACACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 90 bp TTTCCAAAGAGAGTCTGCAGGATGTGCTCCAGCGGTGATGCTGTTTaGGAAGCAGACGAAGCGGTGGAGGAAGCTGCCGTGGAGGCTGCC +
Preference number: 6 (lower is better)
Translates to: FPKRVCRMCSSGDAV*EADEAVEEAAVEAA
Trigger: GGCAGCCTCCACGGCAGCTTCCTCCACCGCTTCGTCTGCTTCCAAAACAGCATCACCGCTGGAGCACATCCTGCAGACTCTCTTTGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS TCA 72 bp CGCGGTGCTGACTGGTGGTGTCTTTCAACATGCTGCTaGAGACGTCGAGAAGCGGCGCTGTGCTCTTCTCAG +
Preference number: 6 (lower is better)
Translates to: RGADWWCLSTCC*RRREAALCSSQ
Trigger: CTGAGAAGAGCACAGCGCCGCTTCTCGACGTCTTCAGCAGCATGTTGAAAGACACCACCAGTCAGCACCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS TCA 72 bp AGCAGAATGAAGATTTCTTGGGTCCTCATACTGGGCTaGGCCGAGAGCCTTGTCCTGCGACGCGAACCCCGG +
Preference number: 6 (lower is better)
Translates to: SRMKISWVLILG*AESLVLRREPR
Trigger: CCGGGGTTCGCGTCGCAGGACAAGGCTCTCGGCTCAGCCCAGTATGAGGACCCAAGAAATCTTCATTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp TGTTGTGAGGCTGGCGGCAAATGCAATACAGGGCGTTaGGGTCGTAACCCTCACATTCAGGCTTCGGTCGGC +
Preference number: 6 (lower is better)
Translates to: CCEAGGKCNTGR*GRNPHIQASVG
Trigger: GCCGACCGAAGCCTGAATGTGAGGGTTACGACCCCAACGCCCTGTATTGCATTTGCCGCCAGCCTCACAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 72 bp AGTGAGGCGGGCTTGTCTGCAGACTGCTGCTCTTGCTaGAACAGCTCTGCCTTGGGCAAGGACGACTTTGGT +
Preference number: 6 (lower is better)
Translates to: SEAGLSADCCSC*NSSALGKDDFG
Trigger: ACCAAAGTCGTCCTTGCCCAAGGCAGAGCTGTTCCAGCAAGAGCAGCAGTCTGCAGACAAGCCCGCCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp GTCTTCGAACTGCTGAGGCTGAATGCCCCTGGGACCTaGCATAAAGTTAGGCGCTTGGCCTCTGGGTCCTTC +
Preference number: 6 (lower is better)
Translates to: VFELLRLNAPGT*HKVRRLASGSF
Trigger: GAAGGACCCAGAGGCCAAGCGCCTAACTTTATGCCAGGTCCCAGGGGCATTCAGCCTCAGCAGTTCGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp CTCTGCCTCCCTTCGAAAGTCTGGTTTCTGTATTCGTaGCCTTTCCCCTCTCGGAAGTCGGCCGATGCCCAC +
Preference number: 6 (lower is better)
Translates to: LCLPSKVWFLYS*PFPSRKSADAH
Trigger: GTGGGCATCGGCCGACTTCCGAGAGGGGAAAGGCCACGAATACAGAAACCAGACTTTCGAAGGGAGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 72 bp GACTTCTTTGGCACGAGGTTTCTAGGTGCAGGCTGCTaGCCCACCGCGGAGCCTGGAGGGGCTGTTTTCTTT +
Preference number: 6 (lower is better)
Translates to: DFFGTRFLGAGC*PTAEPGGAVFF
Trigger: AAAGAAAACAGCCCCTCCAGGCTCCGCGGTGGGCAAGCAGCCTGCACCTAGAAACCTCGTGCCAAAGAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CAA 90 bp AGATCGGGGATGGCCTCCTGCCTGGGGGCCGTCTTCTTGCTTTCATaGTGCAGTTTAGTTCTGGACTCCATCACAGATCTCGCTGGCCTC +
Preference number: 6 (lower is better)
Translates to: RSGMASCLGAVFLLS*CSLVLDSITDLAGL
Trigger: GAGGCCAGCGAGATCTGTGATGGAGTCCAGAACTAAACTGCACAATGAAAGCAAGAAGACGGCCCCCAGGCAGGAGGCCATCCCCGATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CAA 90 bp GATACTTGGAGGGCTTCTTTTCCGACTGCGGGACTGTGGCTACTTTaGGATAGGCCGGAACGTCCGCTTCTTCCGGTTGAAGTCGGGTCC +
Preference number: 6 (lower is better)
Translates to: DTWRASFPTAGLWLL*DRPERPLLPVEVGS
Trigger: GGACCCGACTTCAACCGGAAGAAGCGGACGTTCCGGCCTATCCAAAAGTAGCCACAGTCCCGCAGTCGGAAAAGAAGCCCTCCAAGTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS TCA 72 bp CTGCGGAGGGAACCTGGCCTGTGCAAATTTTACAGTTaGGATCGAAGAGGTGTGCGCGGTGCTGACTGGTGG +
Preference number: 6 (lower is better)
Translates to: LRREPGLCKFYS*DRRGVRGADWW
Trigger: CCACCAGTCAGCACCGCGCACACCTCTTCGATCTCAACTGTAAAATTTGCACAGGCCAGGTTCCCTCCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS TCA 72 bp GGGTGCAGGCGCCCTTTGGTTTGTGAATCTTGGTGGTaGATGGACCCTCTGGTCTTCGAACTGCTGAGGCTG +
Preference number: 6 (lower is better)
Translates to: GCRRPLVCESWW*MDPLVFELLRL
Trigger: CAGCCTCAGCAGTTCGAAGACCAGAGGGTCCATTCACCACCAAGATTCACAAACCAAAGGGCGCCTGCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 72 bp CATTGTAATTGTGATCGCTCGCCCACGACGGCGTGCTaGTCTCACAAGCTGCTTCCTTCCCGAGTGCTTCAC +
Preference number: 6 (lower is better)
Translates to: HCNCDRSPTTAC*SHKLLPSRVLH
Trigger: GTGAAGCACTCGGGAAGGAAGCAGCTTGTGAGAGCAGCACGCCGTCGTGGGCGAGCGATCACAATTACAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 72 bp CTGCATTGTAATTGTGATCGCTCGCCCACGACGGCGTaGTGCTCTCACAAGCTGCTTCCTTCCCGAGTGCTT +
Preference number: 6 (lower is better)
Translates to: LHCNCDRSPTTA*CSHKLLPSRVL
Trigger: AAGCACTCGGGAAGGAAGCAGCTTGTGAGAGCAGCACGCCGTCGTGGGCGAGCGATCACAATTACAATGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 72 bp CGTCCTGGAACTCCCTCTTCTCCCCATGGGGATCCTTaGGTTCTTCAAATTGGGATGGTGCCACTCCTCGTG +
Preference number: 6 (lower is better)
Translates to: RPGTPSSPHGDP*VLQIGMVPLLV
Trigger: CACGAGGAGTGGCACCATCCCAATTTGAAGAACGCAAGGATCCCCATGGGGAGAAGAGGGAGTTCCAGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp CCTTTTCAGAAGAGGCTGGTCGTTCCTTCACAGCTGTaGAAGCAGACTGGGGGCCGCTTCTGGTCTCAGAAG +
Preference number: 6 (lower is better)
Translates to: PFQKRLVVPSQL*KQTGGRFWSQK
Trigger: CTTCTGAGACCAGAAGCGGCCCCCAGTCTGCTTCCACAGCTGTGAAGGAACGACCAGCCTCTTCTGAAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 72 bp GGGCTTCTTTTCCGACTGCGGGACTGTGGCTACTTTTaGATAGGCCGGAACGTCCGCTTCTTCCGGTTGAAG +
Preference number: 6 (lower is better)
Translates to: GLLFRLRDCGYF*IGRNVRFFRLK
Trigger: CTTCAACCGGAAGAAGCGGACGTTCCGGCCTATCCAAAAGTAGCCACAGTCCCGCAGTCGGAAAAGAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp CTGCAGACTGCTGCTCTTGCTGGAACAGCTCTGCCTTaGGCAAGGACGACTTTGGTGGTGGAGACATCAAGG +
Preference number: 6 (lower is better)
Translates to: LQTAALAGTALP*ARTTLVVETSR
Trigger: CCTTGATGTCTCCACCACCAAAGTCGTCCTTGCCCAAGGCAGAGCTGTTCCAGCAAGAGCAGCAGTCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp CTTCTGGGCTCCGAATCTGGCTGGCGGAGGCCCTCGTaGCCCATCGTTAGAAGCGATATTCTCTTCTGGAAA +
Preference number: 6 (lower is better)
Translates to: LLGSESGWRRPS*PIVRSDILFWK
Trigger: TTTCCAGAAGAGAATATCGCTTCTAACGATGGGCCACGAGGGCCTCCGCCAGCCAGATTCGGAGCCCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp CTCCCCATGGGGATCCTTGCGTTCTTCAAATTGGGATaGTGCCACTCCTCGTGGTCCACCAAGGTAAGAGGG +
Preference number: 6 (lower is better)
Translates to: LPMGILAFFKLG*CHSSWSTKVRG
Trigger: CCCTCTTACCTTGGTGGACCACGAGGAGTGGCACCATCCCAATTTGAAGAACGCAAGGATCCCCATGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 72 bp TTGCTGGTGGGTTTGATGGCCTTAGGTGCCTCCTCATaGCTCGGGTCGCCTTTGTCGTCCATACCTGCTCCA +
Preference number: 6 (lower is better)
Translates to: LLVGLMALGASS*LGSPLSSIPAP
Trigger: TGGAGCAGGTATGGACGACAAAGGCGACCCGAGCAATGAGGAGGCACCTAAGGCCATCAAACCCACCAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CAA 72 bp GCGTCCTGGAACTCCCTCTTCTCCCCATGGGGATCCTaGCGTTCTTCAAATTGGGATGGTGCCACTCCTCGT +
Preference number: 6 (lower is better)
Translates to: ASWNSLFSPWGS*RSSNWDGATPR
Trigger: ACGAGGAGTGGCACCATCCCAATTTGAAGAACGCAAGGATCCCCATGGGGAGAAGAGGGAGTTCCAGGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 72 bp CTGAATGCCCCTGGGACCTGGCATAAAGTTAGGCGCTaGGCCTCTGGGTCCTTCAAACTGGTTGGGATGAGG +
Preference number: 6 (lower is better)
Translates to: LNAPGTWHKVRR*ASGSFKLVGMR
Trigger: CCTCATCCCAACCAGTTTGAAGGACCCAGAGGCCAAGCGCCTAACTTTATGCCAGGTCCCAGGGGCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 90 bp GAGTCCTCCAGATCGGGGATGGCCTCCTGCCTGGGGGCCGTCTTCTaGCTTTCATTGTGCAGTTTAGTTCTGGACTCCATCACAGATCTC +
Preference number: 6 (lower is better)
Translates to: ESSRSGMASCLGAVF*LSLCSLVLDSITDL
Trigger: GAGATCTGTGATGGAGTCCAGAACTAAACTGCACAATGAAAGCAAGAAGACGGCCCCCAGGCAGGAGGCCATCCCCGATCTGGAGGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 72 bp GGCTTCTCTTTGGGCCCCACGTCAAACCGCTCTCTCTaGCTCCCTTCGAAAGTCTGGTTTCTGTATTCGTGG +
Preference number: 6 (lower is better)
Translates to: GFSLGPTSNRSL*LPSKVWFLYSW
Trigger: CCACGAATACAGAAACCAGACTTTCGAAGGGAGGCAGAGAGAGCGGTTTGACGTGGGGCCCAAAGAGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp TTATACGGGGCGTCCTGGAACTCCCTCTTCTCCCCATaGGGATCCTTGCGTTCTTCAAATTGGGATGGTGCC +
Preference number: 6 (lower is better)
Translates to: LYGASWNSLFSP*GSLRSSNWDGA
Trigger: GGCACCATCCCAATTTGAAGAACGCAAGGATCCCCATGGGGAGAAGAGGGAGTTCCAGGACGCCCCGTATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 72 bp AGATCGGGGATGGCCTCCTGCCTGGGGGCCGTCTTCTaGCTTTCATTGTGCAGTTTAGTTCTGGACTCCATC +
Preference number: 6 (lower is better)
Translates to: RSGMASCLGAVF*LSLCSLVLDSI
Trigger: GATGGAGTCCAGAACTAAACTGCACAATGAAAGCAAGAAGACGGCCCCCAGGCAGGAGGCCATCCCCGATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CAA 72 bp AGGGCTTCTTTTCCGACTGCGGGACTGTGGCTACTTTaGGATAGGCCGGAACGTCCGCTTCTTCCGGTTGAA +
Preference number: 6 (lower is better)
Translates to: RASFPTAGLWLL*DRPERPLLPVE
Trigger: TTCAACCGGAAGAAGCGGACGTTCCGGCCTATCCAAAAGTAGCCACAGTCCCGCAGTCGGAAAAGAAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 72 bp CAGGGCTGCTGCTCCTTCCAGCAGAATGAAGATTTCTaGGGTCCTCATACTGGGCTGAGCCGAGAGCCTTGT +
Preference number: 6 (lower is better)
Translates to: QGCCSFQQNEDF*GPHTGLSREPC
Trigger: ACAAGGCTCTCGGCTCAGCCCAGTATGAGGACCCAAGAAATCTTCATTCTGCTGGAAGGAGCAGCAGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 72 bp CCTCTTCTCCCCATGGGGATCCTTGCGTTCTTCAAATaGGGATGGTGCCACTCCTCGTGGTCCACCAAGGTA +
Preference number: 6 (lower is better)
Translates to: PLLPMGILAFFK*GWCHSSWSTKV
Trigger: TACCTTGGTGGACCACGAGGAGTGGCACCATCCCAATTTGAAGAACGCAAGGATCCCCATGGGGAGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 90 bp GCAGGCCTCTCCACGGAGTTCCTTCTCACGTCGGCACACATCCTGTaGGGCAGGTCATCAACAGTCACTTTCGCTTCTTCTAAGATGGTC +
Preference number: 6 (lower is better)
Translates to: AGLSTEFLLTSAHIL*GRSSTVTFASSKMV
Trigger: GACCATCTTAGAAGAAGCGAAAGTGACTGTTGATGACCTGCCCAACAGGATGTGTGCCGACGTGAGAAGGAACTCCGTGGAGAGGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS TCA 72 bp CTTTCCAAAGAGAGTCTGCAGGATGTGCTCCAGCGGTaGTGCTGTTTTGGAAGCAGACGAAGCGGTGGAGGA +
Preference number: 6 (lower is better)
Translates to: LSKESLQDVLQR*CCFGSRRSGGG
Trigger: TCCTCCACCGCTTCGTCTGCTTCCAAAACAGCATCACCGCTGGAGCACATCCTGCAGACTCTCTTTGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS GCA 72 bp GCCTCCTGCCTGGGGGCCGTCTTCTTGCTTTCATTGTaGAGTTTAGTTCTGGACTCCATCACAGATCTCGCT +
Preference number: 6 (lower is better)
Translates to: ASCLGAVFLLSL*SLVLDSITDLA
Trigger: AGCGAGATCTGTGATGGAGTCCAGAACTAAACTGCACAATGAAAGCAAGAAGACGGCCCCCAGGCAGGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 72 bp GTCAGGCCATCGCTGTCACTATCGGAGGTGTCATCGTaGTCATCCCCTCCTTTCACCTTTTCAGAAGAGGCT +
Preference number: 6 (lower is better)
Translates to: VRPSLSLSEVSS*SSPPFTFSEEA
Trigger: AGCCTCTTCTGAAAAGGTGAAAGGAGGGGATGACCACGATGACACCTCCGATAGTGACAGCGATGGCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 72 bp GATACTTGGAGGGCTTCTTTTCCGACTGCGGGACTGTaGCTACTTTTGGATAGGCCGGAACGTCCGCTTCTT +
Preference number: 6 (lower is better)
Translates to: DTWRASFPTAGL*LLLDRPERPLL
Trigger: AAGAAGCGGACGTTCCGGCCTATCCAAAAGTAGCCACAGTCCCGCAGTCGGAAAAGAAGCCCTCCAAGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp ACGTCAAACCGCTCTCTCTGCCTCCCTTCGAAAGTCTaGTTTCTGTATTCGTGGCCTTTCCCCTCTCGGAAG +
Preference number: 6 (lower is better)
Translates to: TSNRSLCLPSKV*FLYSWPFPSRK
Trigger: CTTCCGAGAGGGGAAAGGCCACGAATACAGAAACCAGACTTTCGAAGGGAGGCAGAGAGAGCGGTTTGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp GTGATCAGCTTAACACAAAGCTGCAACTCCCAGTCCTaGACAGGCCCAGGGGATGGCTATCCAGAAAGAACG +
Preference number: 6 (lower is better)
Translates to: VISLTQSCNSQS*TGPGDGYPERT
Trigger: CGTTCTTTCTGGATAGCCATCCCCTGGGCCTGTCCAGGACTGGGAGTTGCAGCTTTGTGTTAAGCTGATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354665.8
ENST00000370368.5
ENST00000370371.8
CDS CAA 72 bp CTCCTGGAGGCCCAGGGAAATACGTTCTGTCCACATTaGGATGAGAAGCACTTTCTAGGCCTGGCTCAGAGG +
Preference number: 6 (lower is better)
Translates to: LLEAQGNTFCPH*DEKHFLGLAQR
Trigger: CCTCTGAGCCAGGCCTAGAAAGTGCTTCTCATCCAAATGTGGACAGAACGTATTTCCCTGGGCCTCCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CAA 90 bp CTGAACTCTTTGCTGGTGGGTTTGATGGCCTTAGGTGCCTCCTCATaGCTCGGGTCGCCTTTGTCGTCCATACCTGCTCCAACACTGAAA +
Preference number: 6 (lower is better)
Translates to: LNSLLVGLMALGASS*LGSPLSSIPAPTLK
Trigger: TTTCAGTGTTGGAGCAGGTATGGACGACAAAGGCGACCCGAGCAATGAGGAGGCACCTAAGGCCATCAAACCCACCAGCAAAGAGTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CAA 90 bp GATGGCCATCTCCTGGAGGCCCAGGGAAATACGTTCTGTCCACATTaGGATGAGAAGCACTTTCTAGGCCTGGCTCAGAGGCAACTTCAG +
Preference number: 6 (lower is better)
Translates to: DGHLLEAQGNTFCPH*DEKHFLGLAQRQLQ
Trigger: CTGAAGTTGCCTCTGAGCCAGGCCTAGAAAGTGCTTCTCATCCAAATGTGGACAGAACGTATTTCCCTGGGCCTCCAGGAGATGGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 72 bp GCAGGTCATCAACAGTCACTTTCGCTTCTTCTAAGATaGTCTCATCCTCGGGGTCATAGGCCACCTCTTCCC +
Preference number: 6 (lower is better)
Translates to: AGHQQSLSLLLR*SHPRGHRPPLP
Trigger: GGGAAGAGGTGGCCTATGACCCCGAGGATGAGACCATCTTAGAAGAAGCGAAAGTGACTGTTGATGACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 72 bp AAACCCCATGTTTTCCTGAACTCTTTGCTGGTGGGTTaGATGGCCTTAGGTGCCTCCTCATTGCTCGGGTCG +
Preference number: 6 (lower is better)
Translates to: KPHVFLNSLLVG*MALGASSLLGS
Trigger: CGACCCGAGCAATGAGGAGGCACCTAAGGCCATCAAACCCACCAGCAAAGAGTTCAGGAAAACATGGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CAA 72 bp ATGGCCTCCTGCCTGGGGGCCGTCTTCTTGCTTTCATaGTGCAGTTTAGTTCTGGACTCCATCACAGATCTC +
Preference number: 6 (lower is better)
Translates to: MASCLGAVFLLS*CSLVLDSITDL
Trigger: GAGATCTGTGATGGAGTCCAGAACTAAACTGCACAATGAAAGCAAGAAGACGGCCCCCAGGCAGGAGGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CAA 90 bp GGTCGTATGGCCTGTCGTCCTCCTCTTCCTCTAGAGCCTTATCTTTaGAGAACTGACCGAACTGCTGGACGATCGGATCTAACAACGGAG +
Preference number: 6 (lower is better)
Translates to: GRMACRPPLPLEPYL*RTDRTAGRSDLTTE
Trigger: CTCCGTTGTTAGATCCGATCGTCCAGCAGTTCGGTCAGTTCTCAAAAGATAAGGCTCTAGAGGAAGAGGAGGACGACAGGCCATACGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 90 bp TGTTCTTTACCTGAGCTTAGAAACTTCATTGTCGCTGCGGCGTGTTaGAGGATACAGTCATTACTGCAGTACACCGAGTCGGGCTGCGCC +
Preference number: 6 (lower is better)
Translates to: CSLPELRNFIVAAAC*RIQSLLQYTESGCA
Trigger: GGCGCAGCCCGACTCGGTGTACTGCAGTAATGACTGTATCCTCAAACACGCCGCAGCGACAATGAAGTTTCTAAGCTCAGGTAAAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CAA 90 bp AGGTATCTTGGGTCAGGAGATGAGGATGGCTTAGCTAGTATGGACTaGGGCACCATCACAGAAGTCAAGACAGGCTTCGGCACATCCTGT +
Preference number: 6 (lower is better)
Translates to: RYLGSGDEDGLASMD*GTITEVKTGFGTSC
Trigger: ACAGGATGTGCCGAAGCCTGTCTTGACTTCTGTGATGGTGCCCAAGTCCATACTAGCTAAGCCATCCTCATCTCCTGACCCAAGATACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS TCA 72 bp GGACCTCCTGTCTTCCTTCGTGGATTTATACAACAGTaGCGGCGAGGGAGCAGCAGTCTTTTCTGGCTTTAC +
Preference number: 6 (lower is better)
Translates to: GPPVFLRGFIQQ*RRGSSSLFWLY
Trigger: GTAAAGCCAGAAAAGACTGCTGCTCCCTCGCCGTCACTGTTGTATAAATCCACGAAGGAAGACAGGAGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 72 bp GAGCGTCTGATATTTTGCCGAATTTGTGAATTTGGCTaGGATGGTGCAGCACTCATAGCCCCAAGGCGTCCT +
Preference number: 6 (lower is better)
Translates to: ERLIFCRICEFG*DGAALIAPRRP
Trigger: AGGACGCCTTGGGGCTATGAGTGCTGCACCATCGCAGCCAAATTCACAAATTCGGCAAAATATCAGACGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CAA 72 bp GCCTGTCGTCCTCCTCTTCCTCTAGAGCCTTATCTTTaGAGAACTGACCGAACTGCTGGACGATCGGATCTA +
Preference number: 6 (lower is better)
Translates to: ACRPPLPLEPYL*RTDRTAGRSDL
Trigger: TAGATCCGATCGTCCAGCAGTTCGGTCAGTTCTCAAAAGATAAGGCTCTAGAGGAAGAGGAGGACGACAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS TCA 72 bp CTCCCTCGAGCCTCAGAAATGCCCACACAATCGCCATaGAACCATTCTTCACAGCGGTCACAGCAAATCATA +
Preference number: 6 (lower is better)
Translates to: LPRASEMPTQSP*NHSSQRSQQII
Trigger: TATGATTTGCTGTGACCGCTGTGAAGAATGGTTTCATGGCGATTGTGTGGGCATTTCTGAGGCTCGAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS TCA 72 bp AGGCACCAGGCGCCTCTATCACAGGCTGGAAGATCTTaGGTTTCTTCTTGCCACTTGGATTTGCAGCTTTCT +
Preference number: 6 (lower is better)
Translates to: RHQAPLSQAGRS*VSSCHLDLQLS
Trigger: AGAAAGCTGCAAATCCAAGTGGCAAGAAGAAACTCAAGATCTTCCAGCCTGTGATAGAGGCGCCTGGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS TCA 72 bp CTGAGCTTAGAAACTTCATTGTCGCTGCGGCGTGTTTaGGGATACAGTCATTACTGCAGTACACCGAGTCGG +
Preference number: 6 (lower is better)
Translates to: LSLETSLSLRRV*GYSHYCSTPSR
Trigger: CCGACTCGGTGTACTGCAGTAATGACTGTATCCTCAAACACGCCGCAGCGACAATGAAGTTTCTAAGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS TCA 72 bp ATTTTACAGTTGAGATCGAAGAGGTGTGCGCGGTGCTaGCTGGTGGTGTCTTTCAACATGCTGCTGAAGACG +
Preference number: 6 (lower is better)
Translates to: ILQLRSKRCARC*LVVSFNMLLKT
Trigger: CGTCTTCAGCAGCATGTTGAAAGACACCACCAGTCAGCACCGCGCACACCTCTTCGATCTCAACTGTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CAA 72 bp CCTGAGCTTAGAAACTTCATTGTCGCTGCGGCGTGTTaGAGGATACAGTCATTACTGCAGTACACCGAGTCG +
Preference number: 6 (lower is better)
Translates to: PELRNFIVAAAC*RIQSLLQYTES
Trigger: CGACTCGGTGTACTGCAGTAATGACTGTATCCTCAAACACGCCGCAGCGACAATGAAGTTTCTAAGCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CAA 90 bp CCGTTTCTGAATGAGTCTCATCCTGCACTTGCAGAATGGTGCAGTTaGGGCAGATATAGTCTTCCCCATTCCTTTCCAAAAGCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: PFLNESHPALAEWCS*GRYSLPHSFPKASL
Trigger: GAGGGAGGCTTTTGGAAAGGAATGGGGAAGACTATATCTGCCCAAACTGCACCATTCTGCAAGTGCAGGATGAGACTCATTCAGAAACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS TCA 72 bp TCCTCCTCTTCCTCTAGAGCCTTATCTTTTGAGAACTaGCCGAACTGCTGGACGATCGGATCTAACAACGGA +
Preference number: 6 (lower is better)
Translates to: SSSSSRALSFEN*PNCWTIGSNNG
Trigger: TCCGTTGTTAGATCCGATCGTCCAGCAGTTCGGTCAGTTCTCAAAAGATAAGGCTCTAGAGGAAGAGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CAA 90 bp GCACCAGGCGCCTCTATCACAGGCTGGAAGATCTTGAGTTTCTTCTaGCCACTTGGATTTGCAGCTTTCTCAATTCTACCCTTTATCCCT +
Preference number: 6 (lower is better)
Translates to: APGASITGWKILSFF*PLGFAAFSILPFIP
Trigger: AGGGATAAAGGGTAGAATTGAGAAAGCTGCAAATCCAAGTGGCAAGAAGAAACTCAAGATCTTCCAGCCTGTGATAGAGGCGCCTGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS TCA 72 bp ACCTGCTCCAACACTGAAAGCTTGGACACTTTTCCCTaGAATCCTAAATACAACCAAAAACCCTGGCAGACG +
Preference number: 6 (lower is better)
Translates to: TCSNTESLDTFP*NPKYNQKPWQT
Trigger: CGTCTGCCAGGGTTTTTGGTTGTATTTAGGATTTCAGGGAAAAGTGTCCAAGCTTTCAGTGTTGGAGCAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 72 bp AATGATTTCTTCTTTCCAAAGAGAGTCTGCAGGATGTaGTCCAGCGGTGATGCTGTTTTGGAAGCAGACGAA +
Preference number: 6 (lower is better)
Translates to: NDFFFPKRVCRM*SSGDAVLEADE
Trigger: TTCGTCTGCTTCCAAAACAGCATCACCGCTGGAGCACATCCTGCAGACTCTCTTTGGAAAGAAGAAATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266070.8
ENST00000395343.6
CDS CCA 72 bp ATGAGTCTCATCCTGCACTTGCAGAATGGTGCAGTTTaGGCAGATATAGTCTTCCCCATTCCTTTCCAAAAG +
Preference number: 6 (lower is better)
Translates to: MSLILHLQNGAV*ADIVFPIPFQK
Trigger: CTTTTGGAAAGGAATGGGGAAGACTATATCTGCCCAAACTGCACCATTCTGCAAGTGCAGGATGAGACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CAA 72 bp AATGAGTCTCATCCTGCACTTGCAGAATGGTGCAGTTaGGGCAGATATAGTCTTCCCCATTCCTTTCCAAAA +
Preference number: 6 (lower is better)
Translates to: NESHPALAEWCS*GRYSLPHSFPK
Trigger: TTTTGGAAAGGAATGGGGAAGACTATATCTGCCCAAACTGCACCATTCTGCAAGTGCAGGATGAGACTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS GCA 72 bp ATTCTACCCTTTATCCCTTGGTCTTCGCTAGACTTCTaGTCTATTGTTCCTATACTTGTACAATCGGTGCCA +
Preference number: 6 (lower is better)
Translates to: ILPFIPWSSLDF*SIVPILVQSVP
Trigger: TGGCACCGATTGTACAAGTATAGGAACAATAGAGCAGAAGTCTAGCGAAGACCAAGGGATAAAGGGTAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CAA 90 bp CTTGCCACTTGGATTTGCAGCTTTCTCAATTCTACCCTTTATCCCTaGGTCTTCGCTAGACTTCTGCTCTATTGTTCCTATACTTGTACA +
Preference number: 6 (lower is better)
Translates to: LATWICSFLNSTLYP*VFARLLLYCSYTCT
Trigger: TGTACAAGTATAGGAACAATAGAGCAGAAGTCTAGCGAAGACCAAGGGATAAAGGGTAGAATTGAGAAAGCTGCAAATCCAAGTGGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CCA 72 bp TTTCCACGTGGAAAGCTCTTTAGATACAAGTTCTTCTaGCTTCAGTCTCACAAGTTTCGCCAAAGAGATTTC +
Preference number: 6 (lower is better)
Translates to: FPRGKLFRYKFF*LQSHKFRQRDF
Trigger: GAAATCTCTTTGGCGAAACTTGTGAGACTGAAGCCAGAAGAACTTGTATCTAAAGAGCTTTCCACGTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CAA 72 bp TGGATTTGCAGCTTTCTCAATTCTACCCTTTATCCCTaGGTCTTCGCTAGACTTCTGCTCTATTGTTCCTAT +
Preference number: 6 (lower is better)
Translates to: WICSFLNSTLYP*VFARLLLYCSY
Trigger: ATAGGAACAATAGAGCAGAAGTCTAGCGAAGACCAAGGGATAAAGGGTAGAATTGAGAAAGCTGCAAATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000266070.8
ENST00000354665.8
ENST00000370366.1
ENST00000370368.5
ENST00000370371.8
ENST00000395340.5
ENST00000395343.6
CDS CAA 90 bp GAACATGATGCTGCGATATTTACTCTTGTAGCGATTATCTGTAACTaGAAACAAGTTAAACATCTCCTTCTCAATATGGAGGGCAATTTT +
Preference number: 6 (lower is better)
Translates to: EHDAAIFTLVAIICN*KQVKHLLLNMEGNF
Trigger: AAAATTGCCCTCCATATTGAGAAGGAGATGTTTAACTTGTTTCAAGTTACAGATAATCGCTACAAGAGTAAATATCGCAGCATCATGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6
CDS CAA 72 bp GCTGCGATATTTACTCTTGTAGCGATTATCTGTAACTaGAAACAAGTTAAACATCTCCTTCTCAATATGGAG +
Preference number: 6 (lower is better)
Translates to: AAIFTLVAIICN*KQVKHLLLNME
Trigger: CTCCATATTGAGAAGGAGATGTTTAACTTGTTTCAAGTTACAGATAATCGCTACAAGAGTAAATATCGCAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266070.8
ENST00000395340.5
ENST00000395343.6