RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DHX8 (Homo sapiens)

Ensembl gene IDs: ENSG00000067596

Ensembl transcript IDs: ENST00000262415.8, ENST00000540306.5, ENST00000587044.1, ENST00000587574.1, ENST00000588996.1, ENST00000589898.1, ENST00000592258.5, ENST00000605777.1, ENST00000650571.1

Found 924 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATCCCCCAGCACGGCCCGGCTAGTGCTGATGCTGAAAGACAAGGCTaGAAGTCTGGGTTGTACGTCGTTTCCGAGCGCAAAGAGGCCCTG +
Preference number: 1 (lower is better)
Translates to: IPQHGPASADAERQG*KSGLYVVSERKEAL
Trigger: CAGGGCCTCTTTGCGCTCGGAAACGACGTACAACCCAGACTTCCAGCCTTGTCTTTCAGCATCAGCACTAGCCGGGCCGTGCTGGGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR GCA 90 bp CCAGACCAGCTTTCCGTAAGTTCCGAAACCTGGCCTGGCAAGACCTaGCTGATGTTCCGCCAGGTAAGGAGCCTCCTCAGTGCAGAGGAC +
Preference number: 1 (lower is better)
Translates to: PDQLSVSSETWPGKT*LMFRQVRSLLSAED
Trigger: GTCCTCTGCACTGAGGAGGCTCCTTACCTGGCGGAACATCAGGCAGGTCTTGCCAGGCCAGGTTTCGGAACTTACGGAAAGCTGGTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR TCA 90 bp GAAAGAAAGGGGACACACTTACCCCACAACATGAGGAGTCTGGTGTaGCTGCAGCGTAGGATCCACGGGCAGCTGGTCCGACTCAGGGAG +
Preference number: 1 (lower is better)
Translates to: ERKGTHLPHNMRSLV*LQRRIHGQLVRLRE
Trigger: CTCCCTGAGTCGGACCAGCTGCCCGTGGATCCTACGCTGCAGTCACACCAGACTCCTCATGTTGTGGGGTAAGTGTGTCCCCTTTCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650571.1
3UTR GCA 90 bp CTGCTAGCTGGGGCATCAGGGCACTCACCATGTCCCTGCACAAGATaGTCACCCACTCCACCTTCCCATCCTGGAGCTGCACAAATTGTC +
Preference number: 1 (lower is better)
Translates to: LLAGASGHSPCPCTR*SPTPPSHPGAAQIV
Trigger: GACAATTTGTGCAGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGTGAGTGCCCTGATGCCCCAGCTAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR CCA 90 bp AGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACCTGGCCTaGCAAGACCTGCCTGATGTTCCGCCAGGTAAGGAGCCTCCTCAG +
Preference number: 1 (lower is better)
Translates to: STTSRPAFRKFRNLA*QDLPDVPPGKEPPQ
Trigger: CTGAGGAGGCTCCTTACCTGGCGGAACATCAGGCAGGTCTTGCCAGGCCAGGTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR GCA 90 bp GCTGGAAGTCTGGGTTGTACGTCGTTTCCGAGCGCAAAGAGGCCCTaGGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGTGC +
Preference number: 1 (lower is better)
Translates to: AGSLGCTSFPSAKRP*VLVSGDSGDSHHVC
Trigger: GCACACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTTGCGCTCGGAAACGACGTACAACCCAGACTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR CCA 90 bp GTCTGGGTTGTACGTCGTTTCCGAGCGCAAAGAGGCCCTGCGTTCTaGTTTCAGGGGATTCAGGGGATTCTCATCATGTGTGCCAGAGCA +
Preference number: 1 (lower is better)
Translates to: VWVVRRFRAQRGPAF*FQGIQGILIMCARA
Trigger: TGCTCTGGCACACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTTGCGCTCGGAAACGACGTACAACCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR CCA 90 bp CTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACCTaGCCTGGCAAGACCTGCCTGATGTTCCGCCAGGTAAGGAGCCTC +
Preference number: 1 (lower is better)
Translates to: LQALHPDQLSVSSET*PGKTCLMFRQVRSL
Trigger: GAGGCTCCTTACCTGGCGGAACATCAGGCAGGTCTTGCCAGGCCAGGTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR TCA 90 bp CTCTGTGTTAGATATGAGCTCCCAACTGGGCCCAAGGACTTGGGGTaGTGGAGGCTGCAGGCTCTTGCCAAAGCCAGGTTTAAATCCCTG +
Preference number: 1 (lower is better)
Translates to: LCVRYELPTGPKDLG*WRLQALAKARFKSL
Trigger: CAGGGATTTAAACCTGGCTTTGGCAAGAGCCTGCAGCCTCCATCACCCCAAGTCCTTGGGCCCAGTTGGGAGCTCATATCTAACACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
3UTR TCA 90 bp AAAGACAGAAGCAGGAAAGAAAGGGGACACACTTACCCCACAACATaGGGAGTCTGGTGTGACTGCAGCGTAGGATCCACGGGCAGCTGG +
Preference number: 1 (lower is better)
Translates to: KDRSRKERGHTYPTT*GVWCDCSVGSTGSW
Trigger: CCAGCTGCCCGTGGATCCTACGCTGCAGTCACACCAGACTCCTCATGTTGTGGGGTAAGTGTGTCCCCTTTCTTTCCTGCTTCTGTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650571.1
3UTR GCA 90 bp AGGCACTGCTCCAATGAGACAGCTACAGCAACCACAGGGAGGAAGTaGTTTGGGCTGCAGGAGAGACAGTCAAAGCCAAATCACGTCCAG +
Preference number: 1 (lower is better)
Translates to: RHCSNETATATTGRK*FGLQERQSKPNHVQ
Trigger: CTGGACGTGATTTGGCTTTGACTGTCTCTCCTGCAGCCCAAAGCACTTCCTCCCTGTGGTTGCTGTAGCTGTCTCATTGGAGCAGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587574.1
3UTR CCA 90 bp GCTAAGCAGAGAGGAGTCAGGAAGCACGGAGAAGACTCTTGGGGCTaGCTCAGAGGCAGACGAGAGGAGAAAACGTATCAAAGGAAAGGG +
Preference number: 1 (lower is better)
Translates to: AKQRGVRKHGEDSWG*LRGRREEKTYQRKG
Trigger: CCCTTTCCTTTGATACGTTTTCTCCTCTCGTCTGCCTCTGAGCCAGCCCCAAGAGTCTTCTCCGTGCTTCCTGACTCCTCTCTGCTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650571.1
3UTR TCA 90 bp CCCCAGAAGGCCTTCAAGGTTAACACACAACAATGCCCTGCCCCTTaGTTACTGGCCTGGGCTTACAAAGGCGAATACTCAGACAGAATC +
Preference number: 1 (lower is better)
Translates to: PQKAFKVNTQQCPAP*LLAWAYKGEYSDRI
Trigger: GATTCTGTCTGAGTATTCGCCTTTGTAAGCCCAGGCCAGTAATCAAGGGGCAGGGCATTGTTGTGTGTTAACCTTGAAGGCCTTCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR CCA 90 bp AGGCCTTCAAGGTTAACACACAACAATGCCCTGCCCCTTGATTACTaGCCTGGGCTTACAAAGGCGAATACTCAGACAGAATCAGGAGGC +
Preference number: 1 (lower is better)
Translates to: RPSRLTHNNALPLDY*PGLTKANTQTESGG
Trigger: GCCTCCTGATTCTGTCTGAGTATTCGCCTTTGTAAGCCCAGGCCAGTAATCAAGGGGCAGGGCATTGTTGTGTGTTAACCTTGAAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR CCA 90 bp CCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTaGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGT +
Preference number: 1 (lower is better)
Translates to: PMSLHKMLTHSTFPS*SCTNCPFLEVDAMC
Trigger: ACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
3UTR GCA 90 bp TCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTaGACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGT +
Preference number: 1 (lower is better)
Translates to: SLHKMLTHSTFPSWS*TNCPFLEVDAMCLC
Trigger: ACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
3UTR CCA 90 bp ACCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTaGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGT +
Preference number: 1 (lower is better)
Translates to: TMSLHKMLTHSTFPS*SCTNCPFLEVDAMC
Trigger: ACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR GCA 90 bp ACCAGTCCCAGTTCTTTGTTCAAATCCTCAAACTTGGAGAGGCACTaGTCCAATGAGACAGCTACAGCAACCACAGGGAGGAAGTGCTTT +
Preference number: 1 (lower is better)
Translates to: TSPSSLFKSSNLERH*SNETATATTGRKCF
Trigger: AAAGCACTTCCTCCCTGTGGTTGCTGTAGCTGTCTCATTGGAGCAGTGCCTCTCCAAGTTTGAGGATTTGAACAAAGAACTGGGACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587574.1
3UTR GCA 90 bp CATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTaGCCTCTGAACTGTTCATTAACAAGTCACCAGTCCCAGTTCTTT +
Preference number: 1 (lower is better)
Translates to: HPGKERSPQAEMMAL*PLNCSLTSHQSQFF
Trigger: AAAGAACTGGGACTGGTGACTTGTTAATGAACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587574.1
3UTR GCA 90 bp TTCTATTTTACCAGCAGGGAAGAAATGAGAGTCGAGTTGAGAAAATaGTCAGTTAAGACAGTCAGTCACGGGACAGCTGTATCCTCAGGA +
Preference number: 1 (lower is better)
Translates to: FYFTSREEMRVELRK*SVKTVSHGTAVSSG
Trigger: TCCTGAGGATACAGCTGTCCCGTGACTGACTGTCTTAACTGAGCATTTTCTCAACTCGACTCTCATTTCTTCCCTGCTGGTAAAATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
3UTR-3UTR CCA 90 bp GTAACAGCTAAGCAGAGAGGAGTCAGGAAGCACGGAGAAGACTCTTGGGGCTGGGGATCCACGGGCAGCTaGTCCGACTCAGGGAGGCAA +
Preference number: 2 (lower is better)
Translates to: VTAKQRGVRKHGEDSWGWGSTGS*SDSGRQ
Trigger: TTGCCTCCCTGAGTCGGACCAGCTGCCCGTGGATCC...CCAGCCCCAAGAGTCTTCTCCGTGCTTCCTGACTCCTCTCTGCTTAGCTGTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650571.1
3UTR CAA 90 bp GGCCCGGCTAGTGCTGATGCTGAAAGACAAGGCTGGAAGTCTGGGTaGTACGTCGTTTCCGAGCGCAAAGAGGCCCTGCGTTCTGGTTTC +
Preference number: 2 (lower is better)
Translates to: GPASADAERQGWKSG*YVVSERKEALRSGF
Trigger: GAAACCAGAACGCAGGGCCTCTTTGCGCTCGGAAACGACGTACAACCCAGACTTCCAGCCTTGTCTTTCAGCATCAGCACTAGCCGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR GCA 90 bp GGAGGTGGGTGCCCAGTCCCCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTATGTCCCTGCACAAGATaGTCACCCACTCCACCTTCC +
Preference number: 2 (lower is better)
Translates to: GGGCPVPVSPLVSFEVPVCPCTR*SPTPPS
Trigger: GGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACA...TACAGGGACCTCAAATGAAACCAAAGGGGAAACGGGGACTGGGCACCCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR GCA 90 bp CCAGCTTTCCGTAAGTTCCGAAACCTGGCCTGGCAAGACCTGCCTGATGTTCCGGCCTCCAGACTGAAGTaGTCTGTGGAGAGGACATGG +
Preference number: 2 (lower is better)
Translates to: PAFRKFRNLAWQDLPDVPASRLK*SVERTW
Trigger: CCATGTCCTCTCCACAGAGCACTTCAGTCTGGAGGC...CGGAACATCAGGCAGGTCTTGCCAGGCCAGGTTTCGGAACTTACGGAAAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR GCA 90 bp GGAGGTGGGTGCCCAGTCCCCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTAGGACATGCTGCACATTaGGAATGTGGGAGGTGGAGG +
Preference number: 2 (lower is better)
Translates to: GGGCPVPVSPLVSFEVPVGHAAH*ECGRWR
Trigger: CCTCCACCTCCCACATTCGCAATGTGCAGCATGTCC...TACAGGGACCTCAAATGAAACCAAAGGGGAAACGGGGACTGGGCACCCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR CCA 90 bp GCAAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGCCAAAGTACAGGGGCTaGAGACGGGGTGGGAAGTGG +
Preference number: 2 (lower is better)
Translates to: AKRPCVLVSGDSGDSHHVPKYRG*RRGGKW
Trigger: CCACTTCCCACCCCGTCTCCAGCCCCTGTACTTTGG...CACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR TCA 90 bp GGAGGTGGGTGCCCAGTCCCCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTAAAATCTCCCTCACCCTaGGCCCAGGCCAATATCCTA +
Preference number: 2 (lower is better)
Translates to: GGGCPVPVSPLVSFEVPVKSPSP*AQANIL
Trigger: TAGGATATTGGCCTGGGCTCAGGGTGAGGGAGATTT...TACAGGGACCTCAAATGAAACCAAAGGGGAAACGGGGACTGGGCACCCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR GCA 90 bp GTAACAGCTAAGCAGAGAGGAGTCAGGAAGCACGGAGAAGACTCTTGGGGCTGGTGTCCCTGCACAAGATaGTCACCCACTCCACCTTCC +
Preference number: 2 (lower is better)
Translates to: VTAKQRGVRKHGEDSWGWCPCTR*SPTPPS
Trigger: GGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACA...CCAGCCCCAAGAGTCTTCTCCGTGCTTCCTGACTCCTCTCTGCTTAGCTGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
3UTR-3UTR GCA 90 bp CTCAGACAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCAGCGCAAAGAGGCCCTaGGTTCTGGTTTCAGGGGAT +
Preference number: 2 (lower is better)
Translates to: LRQNQEALSLMKGQGSAASAKRP*VLVSGD
Trigger: ATCCCCTGAAACCAGAACGCAGGGCCTCTTTGCGCT...GGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTGTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR GCA 90 bp CTCAGACAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCAAGGAGCCTCCTCAGTaGAGAGGACAGTGGCTCTCA +
Preference number: 2 (lower is better)
Translates to: LRQNQEALSLMKGQGSAAKEPPQ*RGQWLS
Trigger: TGAGAGCCACTGTCCTCTGCACTGAGGAGGCTCCTT...GGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTGTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR CCA 90 bp CCAGCTTTCCGTAAGTTCCGAAACCTGGCCTGGCAAGACCTGCCTGATGTTCCGTCCACCTTCCCATCCTaGAGCTGCACAAATTGTCCC +
Preference number: 2 (lower is better)
Translates to: PAFRKFRNLAWQDLPDVPSTFPS*SCTNCP
Trigger: GGGACAATTTGTGCAGCTCCAGGATGGGAAGGTGGA...CGGAACATCAGGCAGGTCTTGCCAGGCCAGGTTTCGGAACTTACGGAAAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR CCA 90 bp AAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGTGGTAGCTCCTGCTAGCTaGGGCATCAGGGCACTCACC +
Preference number: 2 (lower is better)
Translates to: KEALRSGFRGFRGFSSCVVAPAS*GIRALT
Trigger: GGTGAGTGCCCTGATGCCCCAGCTAGCAGGAGCTAC...CACACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR TCA 90 bp GGTGTAAAAATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGAAGGTCTCCACAAGCTaGGATGATGGCCCTCTGCCC +
Preference number: 2 (lower is better)
Translates to: GVKIGGNPEGRVHTRRERKVSTS*DDGPLP
Trigger: GGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTT...CCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGATTTTTACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540306.5
ENST00000587574.1
3UTR-3UTR GCA 90 bp CCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTACTGTCTCTCCCCAGAAGGCCAGAGGCAGGAGGATTaGTTGACGCCAGGGATTGGA +
Preference number: 2 (lower is better)
Translates to: PFPLWFHLRSLYCLSPEGQRQED*LTPGIG
Trigger: TCCAATCCCTGGCGTCAAGCAATCCTCCTGCCTCTG...GCCTTCTGGGGAGAGACAGTACAGGGACCTCAAATGAAACCAAAGGGGAAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR TCA 90 bp AGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACCTGGGCAGGAGGATTGCTTaGCGCCAGGGATTGGAGAGC +
Preference number: 2 (lower is better)
Translates to: SFSTSTTSRPAFRKFRNLGRRIA*RQGLES
Trigger: GCTCTCCAATCCCTGGCGTCAAGCAATCCTCCTGCC...CAGGTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR TCA 90 bp AAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTTCAAAGGTCTCCACAAGCTaGGATGATGGCCCTCTGCCC +
Preference number: 2 (lower is better)
Translates to: KERSPQAEMMALCPLNCSKVSTS*DDGPLP
Trigger: GGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTT...TGAACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540306.5
ENST00000587574.1
3UTR-3UTR TCA 90 bp AGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGAATCGGTGGAAACCCTaGAGGCCGAGTACACACACG +
Preference number: 2 (lower is better)
Translates to: RELAEKQHPGKERSPQAENRWKP*RPSTHT
Trigger: CGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGATT...CTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540306.5
ENST00000587574.1
3UTR-3UTR TCA 90 bp ATTCTAATAGCAAGTGTTCCTCCCTCTTCCATCCCGCTTGAATACCTCTGCCTCGTCCGTGGCTGGGTCTaGTGGGGAAGTGGTGTGTTC +
Preference number: 2 (lower is better)
Translates to: ILIASVPPSSIPLEYLCLVRGWV*WGSGVF
Trigger: GAACACACCACTTCCCCATCAGACCCAGCCACGGAC...GAGGCAGAGGTATTCAAGCGGGATGGAAGAGGGAGGAACACTTGCTATTAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589898.1
3UTR-3UTR GCA 90 bp CTCCTGCTAGCTGGGGCATCAGGGCACTCACCATGTCCCTGCACAAGATGCTCATTCCCATCCTGGAGCTaGACAAATTGTCCCTTTCTT +
Preference number: 2 (lower is better)
Translates to: LLLAGASGHSPCPCTRCSFPSWS*TNCPFL
Trigger: AAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAA...TGAGCATCTTGTGCAGGGACATGGTGAGTGCCCTGATGCCCCAGCTAGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR CCA 90 bp TGGCCTGCTGCGCTGGGCATTAAAGCTTCCAGTTCTTTCAGGACATCCACAGCAAGTGGAAGGCTTCGCTaGAGGCCGCATGGTTTGTAT +
Preference number: 2 (lower is better)
Translates to: WPAALGIKASSSFRTSTASGRLR*RPHGLY
Trigger: ATACAAACCATGCGGCCTCCAGCGAAGCCTTCCACT...TGCTGTGGATGTCCTGAAAGAACTGGAAGCTTTAATGCCCAGCGCAGCAGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592258.5
3UTR-3UTR CCA 90 bp CTAATAGCAAGTGTTCCTCCCTCTTCCATCCCGCTTGAATACCTCTGCCTCCAGTTCTTCAGTGCGTTTTaGTGGGGCCTGAGGGTGTCG +
Preference number: 2 (lower is better)
Translates to: LIASVPPSSIPLEYLCLQFFSAF*WGLRVS
Trigger: CGACACCCTCAGGCCCCACCAAAACGCACTGAAGAA...CTGGAGGCAGAGGTATTCAAGCGGGATGGAAGAGGGAGGAACACTTGCTATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589898.1
3UTR-3UTR GCA 90 bp CCAGCTTTCCGTAAGTTCCGAAACCTGGCCTGGCAAGACCTGCCTGATGTTCCGAAAGGAAATGGGACATaGTGCACATTGCGAATGTGG +
Preference number: 2 (lower is better)
Translates to: PAFRKFRNLAWQDLPDVPKGNGT*CTLRMW
Trigger: CCACATTCGCAATGTGCAGCATGTCCCATTTCCTTT...CGGAACATCAGGCAGGTCTTGCCAGGCCAGGTTTCGGAACTTACGGAAAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR CCA 90 bp ATTCTAATAGCAAGTGTTCCTCCCTCTTCCATCCCGCTTGAATACCTCTGCCTCCCCCTTCCTGTGTGCTaGGGAGTTAGCTGTGAGCTG +
Preference number: 2 (lower is better)
Translates to: ILIASVPPSSIPLEYLCLPLPVC*GVSCEL
Trigger: CAGCTCACAGCTAACTCCCCAGCACACAGGAAGGGG...GAGGCAGAGGTATTCAAGCGGGATGGAAGAGGGAGGAACACTTGCTATTAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589898.1
3UTR-3UTR GCA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTTGGGGTGATGGAGGCTaGAGGCTCTTGCCAAAGCCA +
Preference number: 2 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCWGDGG*RLLPKP
Trigger: TGGCTTTGGCAAGAGCCTGCAGCCTCCATCACCCCA...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
3UTR-3UTR CCA 90 bp TTCAAATCCTCAAACTTGGAGAGGCACTGCTCCAATGAGACAGCTACAGCAACCAGGGAGGAAGTGCTTTaGGCTGCAGGAGAGACAGTC +
Preference number: 2 (lower is better)
Translates to: FKSSNLERHCSNETATATREEVL*AAGETV
Trigger: GACTGTCTCTCCTGCAGCCCAAAGCACTTCCTCCCT...GGTTGCTGTAGCTGTCTCATTGGAGCAGTGCCTCTCCAAGTTTGAGGATTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587574.1
3UTR-3UTR CCA 90 bp TCTTTAGGGTGTGGTTTGCTGCCCAGTGACAACATACATTCCTTTATATCCTGGGCCTGGGCAGCACAGTaGGAACCCATCTCTATGGGA +
Preference number: 2 (lower is better)
Translates to: SLGCGLLPSDNIHSFISWAWAAQ*EPISMG
Trigger: TCCCATAGAGATGGGTTCCCACTGTGCTGCCCAGGC...CCAGGATATAAAGGAATGTATGTTGTCACTGGGCAGCAAACCACACCCTAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR CCA 90 bp TTGATTGTAATTCTAATAGCAAGTGTTCCTCCCTCTTCCATCCCGCTTGAATACGAGTTAGCTGTGAGCTaGCTGGGGTGGGGTCCGTGG +
Preference number: 2 (lower is better)
Translates to: LIVILIASVPPSSIPLEYELAVS*LGWGPW
Trigger: CCACGGACCCCACCCCAGCCAGCTCACAGCTAACTC...GTATTCAAGCGGGATGGAAGAGGGAGGAACACTTGCTATTAGAATTACAATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589898.1
3UTR CAA 90 bp CCACCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTaGATGCAATGTGTCTCTGTGTTAGATATGAGCTCCCAACTGGGC +
Preference number: 2 (lower is better)
Translates to: PPSHPGAAQIVPFLK*MQCVSVLDMSSQLG
Trigger: GCCCAGTTGGGAGCTCATATCTAACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
3UTR CAA 90 bp GCAGATTGCCTGGCCTATATTCCTCTCCCTCGGACTCTTTCTGAATaGTCTTTAGGGTGTGGTTTGCTGCCCAGTGACAACATACATTCC +
Preference number: 2 (lower is better)
Translates to: ADCLAYIPLPRTLSE*SLGCGLLPSDNIHS
Trigger: GGAATGTATGTTGTCACTGGGCAGCAAACCACACCCTAAAGACAATTCAGAAAGAGTCCGAGGGAGAGGAATATAGGCCAGGCAATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR GCA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTTGGGGTGATGGAGGCTaGAGGCTCTTGCCAAAGCCA +
Preference number: 2 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVWGDGG*RLLPKP
Trigger: TGGCTTTGGCAAGAGCCTGCAGCCTCCATCACCCCA...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
3UTR-3UTR CCA 90 bp GAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCAAAGCCAAGCTATCGTaGTGGGAAGAAGGTGTAAAA +
Preference number: 2 (lower is better)
Translates to: EKQHPGKERSPQAEMMALKAKLS*WEEGVK
Trigger: TTTTACACCTTCTTCCCACCACGATAGCTTGGCTTT...GAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540306.5
ENST00000587574.1
3UTR CAA 90 bp CCCACTCCACCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTaGAAGTTGATGCAATGTGTCTCTGTGTTAGATATGAGCTCCCAA +
Preference number: 2 (lower is better)
Translates to: PTPPSHPGAAQIVPF*KLMQCVSVLDMSSQ
Trigger: TTGGGAGCTCATATCTAACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGGTGGAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
3UTR-3UTR GCA 90 bp CCCTCCCCAAATAGCCTTGATTGTAATTCTAATAGCAAGTGTTCCTCCCTCTTCGGTTGGATTCTTCAGTaGGTTTTGGTGGGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: PSPNSLDCNSNSKCSSLFGWILQ*VLVGPE
Trigger: CTCAGGCCCCACCAAAACGCACTGAAGAATCCAACC...GAAGAGGGAGGAACACTTGCTATTAGAATTACAATCAAGGCTATTTGGGGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589898.1
3UTR-3UTR CCA 90 bp AGAAGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACCAGTGCAGAGGACAGTaGCTCTCAACTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: RSFSTSTTSRPAFRKFRNQCRGQ*LSTVIP
Trigger: TGGGATTACAGTTGAGAGCCACTGTCCTCTGCACTG...GTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR CCA 90 bp AAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTTCAAAAGCCAAGCTATCGTaGTGGGAAGAAGGTGTAAAA +
Preference number: 2 (lower is better)
Translates to: KERSPQAEMMALCPLNCSKAKLS*WEEGVK
Trigger: TTTTACACCTTCTTCCCACCACGATAGCTTGGCTTT...TGAACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540306.5
ENST00000587574.1
3UTR-3UTR CCA 90 bp TCTCCTGGCCTGCTGCGCTGGGCATTAAAGCTTCCAGTTCTTTCAGGACATCCATTTAGGTTTAACAACTaGATCTTTGCTAGTGGAAGG +
Preference number: 2 (lower is better)
Translates to: SPGLLRWALKLPVLSGHPFRFNN*IFASGR
Trigger: CCTTCCACTAGCAAAGATCCAGTTGTTAAACCTAAA...TGGATGTCCTGAAAGAACTGGAAGCTTTAATGCCCAGCGCAGCAGGCCAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592258.5
3UTR-3UTR CCA 90 bp ATTCTAATAGCAAGTGTTCCTCCCTCTTCCATCCCGCTTGAATACCTCTGCCTCAGGAGGTTTCCTGGTTaGATTCTTCAGTGCGTTTTG +
Preference number: 2 (lower is better)
Translates to: ILIASVPPSSIPLEYLCLRRFPG*ILQCVL
Trigger: CAAAACGCACTGAAGAATCCAACCAGGAAACCTCCT...GAGGCAGAGGTATTCAAGCGGGATGGAAGAGGGAGGAACACTTGCTATTAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589898.1
3UTR-3UTR CCA 90 bp CCCTCCCCAAATAGCCTTGATTGTAATTCTAATAGCAAGTGTTCCTCCCTCTTCGTTCAGGAGGTTTCCTaGTTGGATTCTTCAGTGCGT +
Preference number: 2 (lower is better)
Translates to: PSPNSLDCNSNSKCSSLFVQEVS*LDSSVR
Trigger: ACGCACTGAAGAATCCAACCAGGAAACCTCCTGAAC...GAAGAGGGAGGAACACTTGCTATTAGAATTACAATCAAGGCTATTTGGGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589898.1
3UTR-3UTR CCA 90 bp AAACCTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCGAAGACTCTTGGGGCTaGCTCAGAGGCAGACGAGAG +
Preference number: 2 (lower is better)
Translates to: KPKHKIYTVFPISLGLHLEDSWG*LRGRRE
Trigger: CTCTCGTCTGCCTCTGAGCCAGCCCCAAGAGTCTTC...GAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650571.1
3UTR-3UTR TCA 90 bp CTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCCATCCATTCAGAAAACCGTaGGTAGAGGTCCCATGTCCC +
Preference number: 2 (lower is better)
Translates to: LSIKYTQYSLFPWVFISHPFRKP*VEVPCP
Trigger: GGGACATGGGACCTCTACTCACGGTTTTCTGAATGG...ATGGGAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650571.1
3UTR-3UTR GCA 90 bp AGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACCTGGATTCTCATCATGTGTaGCAGAGCACAGATACTAAA +
Preference number: 2 (lower is better)
Translates to: SFSTSTTSRPAFRKFRNLDSHHV*QSTDTK
Trigger: TTTAGTATCTGTGCTCTGGCACACATGATGAGAATC...CAGGTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR GCA 90 bp AAACCTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCGAGGTCCCATGTCCCTaGACAAGATGCTCACCCACT +
Preference number: 2 (lower is better)
Translates to: KPKHKIYTVFPISLGLHLEVPCP*TRCSPT
Trigger: AGTGGGTGAGCATCTTGTGCAGGGACATGGGACCTC...GAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
3UTR-3UTR GCA 90 bp AGAAGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACGTCGAGTTGAGAAAATaGTCAGTTAAGACAGTCAGT +
Preference number: 2 (lower is better)
Translates to: RSFSTSTTSRPAFRKFRNVELRK*SVKTVS
Trigger: ACTGACTGTCTTAACTGAGCATTTTCTCAACTCGAC...GTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR CCA 90 bp AAACCTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCTCCACCTTCCCATCCTaGAGCTGCACAAATTGTCCC +
Preference number: 2 (lower is better)
Translates to: KPKHKIYTVFPISLGLHLSTFPS*SCTNCP
Trigger: GGGACAATTTGTGCAGCTCCAGGATGGGAAGGTGGA...GAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
3UTR-3UTR CCA 90 bp CTCTTAGTGTCTGGCATACAGTTCTACAGTAGTTCTAGCATTTACATCACTTCAGCTGAAAGACAAGGCTaGAAGTCTGGGTTGTACGTC +
Preference number: 2 (lower is better)
Translates to: LLVSGIQFYSSSSIYITSAERQG*KSGLYV
Trigger: GACGTACAACCCAGACTTCCAGCCTTGTCTTTCAGC...TGAAGTGATGTAAATGCTAGAACTACTGTAGAACTGTATGCCAGACACTAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR GCA 90 bp CTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCCATTTAATGCCTATTTTGTaGCAGAGTCTGTACTGGGGG +
Preference number: 2 (lower is better)
Translates to: LSIKYTQYSLFPWVFISHLMPIL*QSLYWG
Trigger: CCCCCAGTACAGACTCTGGCACAAAATAGGCATTAA...ATGGGAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650571.1
3UTR-3UTR GCA 90 bp CTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCCATGTCGAGTTGAGAAAATaGTCAGTTAAGACAGTCAGT +
Preference number: 2 (lower is better)
Translates to: LSIKYTQYSLFPWVFISHVELRK*SVKTVS
Trigger: ACTGACTGTCTTAACTGAGCATTTTCTCAACTCGAC...ATGGGAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650571.1
3UTR TCA 72 bp AAGTGCTCTGTGGAGAGGACATGGTTGATCATCGGGTaGTCCCCCAGCACGGCCCGGCTAGTGCTGATGCTG +
Preference number: 3 (lower is better)
Translates to: KCSVERTWLIIG*SPSTARLVLML
Trigger: CAGCATCAGCACTAGCCGGGCCGTGCTGGGGGATCACCCGATGATCAACCATGTCCTCTCCACAGAGCACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR TCA 72 bp GGGACACACTTACCCCACAACATGAGGAGTCTGGTGTaGCTGCAGCGTAGGATCCACGGGCAGCTGGTCCGA +
Preference number: 3 (lower is better)
Translates to: GTHLPHNMRSLV*LQRRIHGQLVR
Trigger: TCGGACCAGCTGCCCGTGGATCCTACGCTGCAGTCACACCAGACTCCTCATGTTGTGGGGTAAGTGTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
3UTR GCA 72 bp CTGCTAGCTGGGGCATCAGGGCACTCACCATGTCCCTaGACAAGATGCTCACCCACTCCACCTTCCCATCCT +
Preference number: 3 (lower is better)
Translates to: LLAGASGHSPCP*TRCSPTPPSHP
Trigger: AGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGTGAGTGCCCTGATGCCCCAGCTAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR CAA 90 bp CAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCAGCAGAGGCTGGAAGTCTGGGTaGTACGTCGTTTCCGAGCGC +
Preference number: 3 (lower is better)
Translates to: QNQEALSLMKGQGSAASRGWKSG*YVVSER
Trigger: GCGCTCGGAAACGACGTACAACCCAGACTTCCAGCC...TCTGCTGGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR TCA 72 bp GAGAGACAGTCAAAGCCAAATCACGTCCAGGCGGGATaGAGTAAACCTGGACCGAGGAGCCTGACCCAGCTG +
Preference number: 3 (lower is better)
Translates to: ERQSKPNHVQAG*SKPGPRSLTQL
Trigger: CAGCTGGGTCAGGCTCCTCGGTCCAGGTTTACTTCATCCCGCCTGGACGTGATTTGGCTTTGACTGTCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587574.1
3UTR GCA 72 bp CTTTCCGTAAGTTCCGAAACCTGGCCTGGCAAGACCTaGCTGATGTTCCGCCAGGTAAGGAGCCTCCTCAGT +
Preference number: 3 (lower is better)
Translates to: LSVSSETWPGKT*LMFRQVRSLLS
Trigger: ACTGAGGAGGCTCCTTACCTGGCGGAACATCAGGCAGGTCTTGCCAGGCCAGGTTTCGGAACTTACGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR CCA 72 bp GTGTTAGATATGAGCTCCCAACTGGGCCCAAGGACTTaGGGTGATGGAGGCTGCAGGCTCTTGCCAAAGCCA +
Preference number: 3 (lower is better)
Translates to: VLDMSSQLGPRT*GDGGCRLLPKP
Trigger: TGGCTTTGGCAAGAGCCTGCAGCCTCCATCACCCCAAGTCCTTGGGCCCAGTTGGGAGCTCATATCTAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
3UTR CCA 72 bp CACGGCCCGGCTAGTGCTGATGCTGAAAGACAAGGCTaGAAGTCTGGGTTGTACGTCGTTTCCGAGCGCAAA +
Preference number: 3 (lower is better)
Translates to: HGPASADAERQG*KSGLYVVSERK
Trigger: TTTGCGCTCGGAAACGACGTACAACCCAGACTTCCAGCCTTGTCTTTCAGCATCAGCACTAGCCGGGCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR CCA 72 bp TCCAGACCAGCTTTCCGTAAGTTCCGAAACCTGGCCTaGCAAGACCTGCCTGATGTTCCGCCAGGTAAGGAG +
Preference number: 3 (lower is better)
Translates to: SRPAFRKFRNLA*QDLPDVPPGKE
Trigger: CTCCTTACCTGGCGGAACATCAGGCAGGTCTTGCCAGGCCAGGTTTCGGAACTTACGGAAAGCTGGTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR GCA 72 bp CTGGGTTGTACGTCGTTTCCGAGCGCAAAGAGGCCCTaGGTTCTGGTTTCAGGGGATTCAGGGGATTCTCAT +
Preference number: 3 (lower is better)
Translates to: LGCTSFPSAKRP*VLVSGDSGDSH
Trigger: ATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTTGCGCTCGGAAACGACGTACAACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR CCA 72 bp CTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACCTaGCCTGGCAAGACCTGCCTGATGTTCCGCCAGGTA +
Preference number: 3 (lower is better)
Translates to: LHPDQLSVSSET*PGKTCLMFRQV
Trigger: TACCTGGCGGAACATCAGGCAGGTCTTGCCAGGCCAGGTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR CAA 90 bp AGCTGTGAGGAGGGCACAAGGAGGTGGCTATTCTCCAAGCAAGTGCTAGGAAAAGGGACATGCTGCACATaGCGAATGTGGGAGGTGGAG +
Preference number: 3 (lower is better)
Translates to: SCEEGTRRWLFSKQVLGKGTCCT*RMWEVE
Trigger: CTCCACCTCCCACATTCGCAATGTGCAGCATGTCCC...TTTTCCTAGCACTTGCTTGGAGAATAGCCACCTCCTTGTGCCCTCCTCACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR TCA 72 bp AGCAGGAAAGAAAGGGGACACACTTACCCCACAACATaGGGAGTCTGGTGTGACTGCAGCGTAGGATCCACG +
Preference number: 3 (lower is better)
Translates to: SRKERGHTYPTT*GVWCDCSVGST
Trigger: CGTGGATCCTACGCTGCAGTCACACCAGACTCCTCATGTTGTGGGGTAAGTGTGTCCCCTTTCTTTCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650571.1
3UTR CCA 72 bp GTACGTCGTTTCCGAGCGCAAAGAGGCCCTGCGTTCTaGTTTCAGGGGATTCAGGGGATTCTCATCATGTGT +
Preference number: 3 (lower is better)
Translates to: VRRFRAQRGPAF*FQGIQGILIMC
Trigger: ACACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTTGCGCTCGGAAACGACGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR CCA 72 bp AGAGGAGTCAGGAAGCACGGAGAAGACTCTTGGGGCTaGCTCAGAGGCAGACGAGAGGAGAAAACGTATCAA +
Preference number: 3 (lower is better)
Translates to: RGVRKHGEDSWG*LRGRREEKTYQ
Trigger: TTGATACGTTTTCTCCTCTCGTCTGCCTCTGAGCCAGCCCCAAGAGTCTTCTCCGTGCTTCCTGACTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650571.1
3UTR TCA 72 bp AGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTaGGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACA +
Preference number: 3 (lower is better)
Translates to: RPSTHTKREGVS*EAASRERKVST
Trigger: TGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540306.5
ENST00000587574.1
3UTR CCA 72 bp AATGAAGGGGCAGGGATCTGCAGCCAGCAGATTGCCTaGCCTATATTCCTCTCCCTCGGACTCTTTCTGAAT +
Preference number: 3 (lower is better)
Translates to: NEGAGICSQQIA*PIFLSLGLFLN
Trigger: ATTCAGAAAGAGTCCGAGGGAGAGGAATATAGGCCAGGCAATCTGCTGGCTGCAGATCCCTGCCCCTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR CAA 90 bp GAACAGAAGGGTTGTCCGGTTGGCAAAGGACTGGGAAGAGTTCCTTCAGCTTTTTGGAGGCCGCATGGTTaGTATGAGACGCAGCAAGTT +
Preference number: 3 (lower is better)
Translates to: EQKGCPVGKGLGRVPSAFWRPHG*YETQQV
Trigger: AACTTGCTGCGTCTCATACAAACCATGCGGCCTCCA...AAAAGCTGAAGGAACTCTTCCCAGTCCTTTGCCAACCGGACAACCCTTCTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592258.5
3UTR-3UTR CAA 90 bp CGGGCAGCTGGTCCGACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGACAGTGATGAGCAGTTaGTTCCTGATTTCCATTCAG +
Preference number: 3 (lower is better)
Translates to: RAAGPTQGGNLFSDFSLQTVMSS*FLISIQ
Trigger: CTGAATGGAAATCAGGAACAAACTGCTCATCACTGT...CTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGTCGGACCAGCTGCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
3UTR TCA 72 bp GTGGTGGGAAGAAGGTGTAAAAATCGGTGGAAACCCTaGAGGCCGAGTACACACACGAAGAGAGAGGGAGTT +
Preference number: 3 (lower is better)
Translates to: VVGRRCKNRWKP*RPSTHTKREGV
Trigger: AACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGATTTTTACACCTTCTTCCCACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540306.5
ENST00000587574.1
3UTR TCA 72 bp GAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTaGGATGATGGCCCTCTGCCCTCTGAACTGTTCATT +
Preference number: 3 (lower is better)
Translates to: EAASRERKVSTS*DDGPLPSELFI
Trigger: AATGAACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587574.1
3UTR-3UTR CAA 90 bp GGAGGTGGGTGCCCAGTCCCCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTAGAAATGAGAGTCGAGTaGAGAAAATGCTCAGTTAAG +
Preference number: 3 (lower is better)
Translates to: GGGCPVPVSPLVSFEVPVEMRVE*RKCSVK
Trigger: CTTAACTGAGCATTTTCTCAACTCGACTCTCATTTC...TACAGGGACCTCAAATGAAACCAAAGGGGAAACGGGGACTGGGCACCCACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR CAA 90 bp AAGGCTGGAAGTCTGGGTTGTACGTCGTTTCCGAGCGCAAAGAGGCCCTGCGTTCAAATTGTCCCTTTCTaGAAGTTGATGCAATGTGTC +
Preference number: 3 (lower is better)
Translates to: KAGSLGCTSFPSAKRPCVQIVPF*KLMQCV
Trigger: GACACATTGCATCAACTTCAAGAAAGGGACAATTTG...AACGCAGGGCCTCTTTGCGCTCGGAAACGACGTACAACCCAGACTTCCAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR TCA 72 bp GTGTGCCAGAGCACAGATACTAAATCTCCCTCACCCTaGGCCCAGGCCAATATCCTAACCTTTCGGCTAAAA +
Preference number: 3 (lower is better)
Translates to: VCQSTDTKSPSP*AQANILTFRLK
Trigger: TTTTAGCCGAAAGGTTAGGATATTGGCCTGGGCTCAGGGTGAGGGAGATTTAGTATCTGTGCTCTGGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR TCA 72 bp GCCTTCAAGGTTAACACACAACAATGCCCTGCCCCTTaGTTACTGGCCTGGGCTTACAAAGGCGAATACTCA +
Preference number: 3 (lower is better)
Translates to: AFKVNTQQCPAP*LLAWAYKGEYS
Trigger: TGAGTATTCGCCTTTGTAAGCCCAGGCCAGTAATCAAGGGGCAGGGCATTGTTGTGTGTTAACCTTGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR CCA 72 bp CTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTaGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGAT +
Preference number: 3 (lower is better)
Translates to: LHKMLTHSTFPS*SCTNCPFLEVD
Trigger: ATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
3UTR CCA 72 bp TCAAAAGGAAATGGGACATGCTGCACATTGCGAATGTaGGAGGTGGAGGGAGCAAGGGGAAACCTTCTGTAT +
Preference number: 3 (lower is better)
Translates to: SKGNGTCCTLRM*EVEGARGNLLY
Trigger: ATACAGAAGGTTTCCCCTTGCTCCCTCCACCTCCCACATTCGCAATGTGCAGCATGTCCCATTTCCTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR CAA 90 bp AGAAGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACGGAGGCTGCAGGCTCTaGCCAAAGCCAGGTTTAAAT +
Preference number: 3 (lower is better)
Translates to: RSFSTSTTSRPAFRKFRNGGCRL*PKPGLN
Trigger: ATTTAAACCTGGCTTTGGCAAGAGCCTGCAGCCTCC...GTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR CAA 90 bp AAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGTGGTCCCTTTCTTGAAGTaGATGCAATGTGTCTCTGTG +
Preference number: 3 (lower is better)
Translates to: KEALRSGFRGFRGFSSCVVPFLK*MQCVSV
Trigger: CACAGAGACACATTGCATCAACTTCAAGAAAGGGAC...CACACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR GCA 72 bp AAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTaGACAAATTGTCCCTTTCTTGAAGTTGATGCAATG +
Preference number: 3 (lower is better)
Translates to: KMLTHSTFPSWS*TNCPFLEVDAM
Trigger: CATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
3UTR GCA 72 bp AGTTCTTTGTTCAAATCCTCAAACTTGGAGAGGCACTaGTCCAATGAGACAGCTACAGCAACCACAGGGAGG +
Preference number: 3 (lower is better)
Translates to: SSLFKSSNLERH*SNETATATTGR
Trigger: CCTCCCTGTGGTTGCTGTAGCTGTCTCATTGGAGCAGTGCCTCTCCAAGTTTGAGGATTTGAACAAAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587574.1
3UTR GCA 72 bp AAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTaGCCTCTGAACTGTTCATTAACAAGTCACCAGTCC +
Preference number: 3 (lower is better)
Translates to: KERSPQAEMMAL*PLNCSLTSHQS
Trigger: GGACTGGTGACTTGTTAATGAACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587574.1
3UTR CCA 72 bp AGGTTAACACACAACAATGCCCTGCCCCTTGATTACTaGCCTGGGCTTACAAAGGCGAATACTCAGACAGAA +
Preference number: 3 (lower is better)
Translates to: RLTHNNALPLDY*PGLTKANTQTE
Trigger: TTCTGTCTGAGTATTCGCCTTTGTAAGCCCAGGCCAGTAATCAAGGGGCAGGGCATTGTTGTGTGTTAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR CAA 90 bp ACAGAAGGGTTGTCCGGTTGGCAAAGGACTGGGAAGAGTTCCTTCAGCTTTTCTTTAACAACTGGATCTTaGCTAGTGGAAGGCTTCGCT +
Preference number: 3 (lower is better)
Translates to: TEGLSGWQRTGKSSFSFSLTTGS*LVEGFA
Trigger: AGCGAAGCCTTCCACTAGCAAAGATCCAGTTGTTAA...AGAAAAGCTGAAGGAACTCTTCCCAGTCCTTTGCCAACCGGACAACCCTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592258.5
3UTR-3UTR CAA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTGGAGGCTGCAGGCTCTaGCCAAAGCCAGGTTTAAAT +
Preference number: 3 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVGGCRL*PKPGLN
Trigger: ATTTAAACCTGGCTTTGGCAAGAGCCTGCAGCCTCC...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
3UTR-3UTR CAA 90 bp CTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCCATCAAGGAGCTCACAGTTaGGTGGGGGACACAGACCTG +
Preference number: 3 (lower is better)
Translates to: LSIKYTQYSLFPWVFISHQGAHS*VGDTDL
Trigger: CAGGTCTGTGTCCCCCACCAAACTGTGAGCTCCTTG...ATGGGAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650571.1
3UTR GCA 72 bp ACCAGCAGGGAAGAAATGAGAGTCGAGTTGAGAAAATaGTCAGTTAAGACAGTCAGTCACGGGACAGCTGTA +
Preference number: 3 (lower is better)
Translates to: TSREEMRVELRK*SVKTVSHGTAV
Trigger: TACAGCTGTCCCGTGACTGACTGTCTTAACTGAGCATTTTCTCAACTCGACTCTCATTTCTTCCCTGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
3UTR-3UTR CAA 90 bp ACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGCTCAGGTACCAGACAGAAATGAGAGTCGAGTaGAGAAAATGCTCAGTTAAG +
Preference number: 3 (lower is better)
Translates to: TQGGNLFSDFSLQLRYQTEMRVE*RKCSVK
Trigger: CTTAACTGAGCATTTTCTCAACTCGACTCTCATTTC...TGTCTGGTACCTGAGCTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
3UTR-3UTR CAA 90 bp TCTTTAGGGTGTGGTTTGCTGCCCAGTGACAACATACATTCCTTTATATCCTGGGACCATAAAATCCCTTaGTTAAAGTCCATCCAGGAC +
Preference number: 3 (lower is better)
Translates to: SLGCGLLPSDNIHSFISWDHKIP*LKSIQD
Trigger: GTCCTGGATGGACTTTAACAAAGGGATTTTATGGTC...CCAGGATATAAAGGAATGTATGTTGTCACTGGGCAGCAAACCACACCCTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR-3UTR CAA 90 bp CTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCCATCAAATTGTCCCTTTCTaGAAGTTGATGCAATGTGTC +
Preference number: 3 (lower is better)
Translates to: LSIKYTQYSLFPWVFISHQIVPF*KLMQCV
Trigger: GACACATTGCATCAACTTCAAGAAAGGGACAATTTG...ATGGGAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp GGGTCCGTGGCTGGGTCCGTGGCTGGGTCTGATGGGGAAGTGGTGTGTTCAGGAGAGTTAGCTGTGAGCTaGCTGGGGTGGGGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: GSVAGSVAGSDGEVVCSGELAVS*LGWGPW
Trigger: CCACGGACCCCACCCCAGCCAGCTCACAGCTAACTC...TCCTGAACACACCACTTCCCCATCAGACCCAGCCACGGACCCAGCCACGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR TCA 90 bp GGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGCTGGACCGAGGAGCCTaGCCCAGCTGCGGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: GRVHTRRERELAEKQHPGLDRGA*PSCGAH
Trigger: GTGAGCTCCGCAGCTGGGTCAGGCTCCTCGGTCCAG...CCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587574.1
CDS-3UTR CCA 90 bp CGGGTGATCCCCCAGCACGGCCCGGCTAGTGCTGATGCTGAAAGACAAGGCTGGGCCACTCTTCTGGGCTaGGTACACCCAATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: RVIPQHGPASADAERQGWATLLG*VHPILP
Trigger: GGGCAAGATTGGGTGTACCCAGCCCAGAAGAGTGGC...CCAGCCTTGTCTTTCAGCATCAGCACTAGCCGGGCCGTGCTGGGGGATCACCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp AAGGCTGGAAGTCTGGGTTGTACGTCGTTTCCGAGCGCAAAGAGGCCCTGCGTTTGGTTGATCATCGGGTaGTCCCCCAGCACGGCCCGG +
Preference number: 4 (lower is better)
Translates to: KAGSLGCTSFPSAKRPCVWLIIG*SPSTAR
Trigger: CCGGGCCGTGCTGGGGGATCACCCGATGATCAACCA...AACGCAGGGCCTCTTTGCGCTCGGAAACGACGTACAACCCAGACTTCCAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp GTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTTGCTTGCGAATGTCCTaGGCCCGGCGCAGGGAACGA +
Preference number: 4 (lower is better)
Translates to: VPCPCTRCSPTPPSHPGACLRMS*ARRRER
Trigger: TCGTTCCCTGCGCCGGGCCCAGGACATTCGCAAGCA...AGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp GGGTCCGTGGCTGGGTCCGTGGCTGGGTCTGATGGGGAAGTGGTGTGTTCAGGATTTTCGGCAGTCCTTTaGCACAGAGAGCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GSVAGSVAGSDGEVVCSGFSAVL*HREPRA
Trigger: AGCCCTGGGCTCTCTGTGCCAAAGGACTGCCGAAAA...TCCTGAACACACCACTTCCCCATCAGACCCAGCCACGGACCCAGCCACGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR TCA 90 bp AACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGGGCGGCCCAAGCGAGTaGGCAGGCCCTCGTCATCCA +
Preference number: 4 (lower is better)
Translates to: NPEGRVHTRRERELAEKQGGPSE*AGPRHP
Trigger: TGGATGACGAGGGCCTGCTCACTCGCTTGGGCCGCC...CTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp GCTGGGTCCGTGGCTGGGTCTGATGGGGAAGTGGTGTGTTCAGGAGGTTTCCTGCTCTTCCATCCCGCTTaGATACCTCTGCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: AGSVAGSDGEVVCSGGFLLFHPA*IPLPPG
Trigger: GCCTGGAGGCAGAGGTATTCAAGCGGGATGGAAGAG...CAGGAAACCTCCTGAACACACCACTTCCCCATCAGACCCAGCCACGGACCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR GCA 90 bp GGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGCGGAGCTCAGAGATGTaGACCAGGCCTTCCCACCGC +
Preference number: 4 (lower is better)
Translates to: GRVHTRRERELAEKQHPGRSSEM*TRPSHR
Trigger: GCGGTGGGAAGGCCTGGTGCACATCTCTGAGCTCCG...CCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp CCAGCTTTCCGTAAGTTCCGAAACCTGGCCTGGCAAGACCTGCCTGATGTTCCGTCCTCTCCCGGGTCCTaGAACGTGATCGAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: PAFRKFRNLAWQDLPDVPSSPGS*NVIESG
Trigger: CCCGCTCTCGATCACGTTCCAGGACCCGGGAGAGGA...CGGAACATCAGGCAGGTCTTGCCAGGCCAGGTTTCGGAACTTACGGAAAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp AGTAGAGGTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTCCTCTCCCGGGTCCTaGAACGTGATCGAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: SRGPMSLHKMLTHSTFPSSSPGS*NVIESG
Trigger: CCCGCTCTCGATCACGTTCCAGGACCCGGGAGAGGA...GGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGACCTCTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp CCAGCTTTCCGTAAGTTCCGAAACCTGGCCTGGCAAGACCTGCCTGATGTTCCGTGCTTGCGAATGTCCTaGGCCCGGCGCAGGGAACGA +
Preference number: 4 (lower is better)
Translates to: PAFRKFRNLAWQDLPDVPCLRMS*ARRRER
Trigger: TCGTTCCCTGCGCCGGGCCCAGGACATTCGCAAGCA...CGGAACATCAGGCAGGTCTTGCCAGGCCAGGTTTCGGAACTTACGGAAAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp AGTAGAGGTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCGGATCCACGGGCAGCTaGTCCGACTCAGGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: SRGPMSLHKMLTHSTFPSGSTGS*SDSGRQ
Trigger: TTGCCTCCCTGAGTCGGACCAGCTGCCCGTGGATCC...GGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGACCTCTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR TCA 90 bp CGGGTGATCCCCCAGCACGGCCCGGCTAGTGCTGATGCTGAAAGACAAGGCTGGTCGTTGATCCCCAAGTaGTTGTCCAGCTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: RVIPQHGPASADAERQGWSLIPK*LSSSVQ
Trigger: TTGCACTGAGCTGGACAATCACTTGGGGATCAACGA...CCAGCCTTGTCTTTCAGCATCAGCACTAGCCGGGCCGTGCTGGGGGATCACCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp AACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCCGGGTCCTGGAACGTaGTCGAGAGCGGGATCGGTG +
Preference number: 4 (lower is better)
Translates to: NPEGRVHTRRERELAEKQPGPGT*SRAGSV
Trigger: CACCGATCCCGCTCTCGATCACGTTCCAGGACCCGG...CTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp CGGGTGATCCCCCAGCACGGCCCGGCTAGTGCTGATGCTGAAAGACAAGGCTGGCTGACAAGGGACAAGTaGGTGGGTCTATCAGGATTC +
Preference number: 4 (lower is better)
Translates to: RVIPQHGPASADAERQGWLTRDK*VGLSGF
Trigger: GAATCCTGATAGACCCACTCACTTGTCCCTTGTCAG...CCAGCCTTGTCTTTCAGCATCAGCACTAGCCGGGCCGTGCTGGGGGATCACCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp CGGGTGATCCCCCAGCACGGCCCGGCTAGTGCTGATGCTGAAAGACAAGGCTGGGCAGCACAAACCAGCTaGGAGGAGAGGTGTTATGTT +
Preference number: 4 (lower is better)
Translates to: RVIPQHGPASADAERQGWAAQTS*EERCYV
Trigger: AACATAACACCTCTCCTCTCAGCTGGTTTGTGCTGC...CCAGCCTTGTCTTTCAGCATCAGCACTAGCCGGGCCGTGCTGGGGGATCACCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp CCAGCTTTCCGTAAGTTCCGAAACCTGGCCTGGCAAGACCTGCCTGATGTTCCGGGTCCTTCCGGTCTTTaGGGGGACTCTGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: PAFRKFRNLAWQDLPDVPGPSGL*GDSDSC
Trigger: GCAGGAGTCAGAGTCCCCCCAAAGACCGGAAGGACC...CGGAACATCAGGCAGGTCTTGCCAGGCCAGGTTTCGGAACTTACGGAAAGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp GTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTAATGGTGGGCTCTTCTaGAGGAGGGCGGTCCACATG +
Preference number: 4 (lower is better)
Translates to: VPCPCTRCSPTPPSHPGANGGLF*RRAVHM
Trigger: CATGTGGACCGCCCTCCTCCAGAAGAGCCCACCATT...AGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp CGGGTGATCCCCCAGCACGGCCCGGCTAGTGCTGATGCTGAAAGACAAGGCTGGAGTCCTCAAATCGAATaGTGTAGCCCACCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: RVIPQHGPASADAERQGWSPQIE*CSPPLG
Trigger: GCCAAGAGGTGGGCTACACCATTCGATTTGAGGACT...CCAGCCTTGTCTTTCAGCATCAGCACTAGCCGGGCCGTGCTGGGGGATCACCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp CGGGTGATCCCCCAGCACGGCCCGGCTAGTGCTGATGCTGAAAGACAAGGCTGGAACCTTTCTGCTGCCTaGTGGAGCTGGGTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: RVIPQHGPASADAERQGWNLSAA*WSWVKD
Trigger: ATCTTTGACCCAGCTCCACCAGGCAGCAGAAAGGTT...CCAGCCTTGTCTTTCAGCATCAGCACTAGCCGGGCCGTGCTGGGGGATCACCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp CGGGTGATCCCCCAGCACGGCCCGGCTAGTGCTGATGCTGAAAGACAAGGCTGGGCTGAAAGACAAGGCTaGAAGTCTGGGTTGTACGTC +
Preference number: 4 (lower is better)
Translates to: RVIPQHGPASADAERQGWAERQG*KSGLYV
Trigger: GACGTACAACCCAGACTTCCAGCCTTGTCTTTCAGC...CCAGCCTTGTCTTTCAGCATCAGCACTAGCCGGGCCGTGCTGGGGGATCACCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp AGCTGTGAGGAGGGCACAAGGAGGTGGCTATTCTCCAAGCAAGTGCTAGGAAAACCGGGTCCTGGAACGTaGTCGAGAGCGGGATCGGTG +
Preference number: 4 (lower is better)
Translates to: SCEEGTRRWLFSKQVLGKPGPGT*SRAGSV
Trigger: CACCGATCCCGCTCTCGATCACGTTCCAGGACCCGG...TTTTCCTAGCACTTGCTTGGAGAATAGCCACCTCCTTGTGCCCTCCTCACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp CAGGAGAAGCAGCAACGTAACAGGATGTGCCCAATCTCTCAGAAGCTTCTCTACGGCGGCCCAAGCGAGTaGGCAGGCCCTCGTCATCCA +
Preference number: 4 (lower is better)
Translates to: QEKQQRNRMCPISQKLLYGGPSE*AGPRHP
Trigger: TGGATGACGAGGGCCTGCTCACTCGCTTGGGCCGCC...GTAGAGAAGCTTCTGAGAGATTGGGCACATCCTGTTACGTTGCTGCTTCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp AGTAGAGGTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCACACAGCTAGCAGGGTaGGGTGGTCCCCTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: SRGPMSLHKMLTHSTFPSTQLAG*GGPLQS
Trigger: AGACTGAAGGGGACCACCTCACCCTGCTAGCTGTGT...GGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGACCTCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR TCA 90 bp CTCAGACAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCGGCAGGAGGATTGCTTaGCGCCAGGGATTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LRQNQEALSLMKGQGSAAGRRIA*RQGLES
Trigger: GCTCTCCAATCCCTGGCGTCAAGCAATCCTCCTGCC...GGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTGTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp GTGCTTTGGGCTGCAGGAGAGACAGTCAAAGCCAAATCACGTCCAGGCGGGATGAAGGTCTCCACAAGCTaGGATGATGGCCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: VLWAAGETVKAKSRPGGMKVSTS*DDGPLP
Trigger: GGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTT...CATCCCGCCTGGACGTGATTTGGCTTTGACTGTCTCTCCTGCAGCCCAAAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587574.1
CDS-3UTR GCA 90 bp CTCCTGCTAGCTGGGGCATCAGGGCACTCACCATGTCCCTGCACAAGATGCTCAACTCTGCATCATTGCTaGTTGGGAGAGGGAGCCGTC +
Preference number: 4 (lower is better)
Translates to: LLLAGASGHSPCPCTRCSTLHHC*LGEGAV
Trigger: GACGGCTCCCTCTCCCAAGCAGCAATGATGCAGAGT...TGAGCATCTTGTGCAGGGACATGGTGAGTGCCCTGATGCCCCAGCTAGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGGCCACCGACATAGCTaGCACTCTTCTGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SRDSCILRTSLSSISPSPGHRHS*HSSGLG
Trigger: ACCCAGCCCAGAAGAGTGGCAGCTATGTCGGTGGCC...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp GTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTCTGTTCTCCCAGCTCTaGCAGCTCGTTGCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: VPCPCTRCSPTPPSHPGALFSQL*QLVALP
Trigger: AGGCAAAGCAACGAGCTGGCAGAGCTGGGAGAACAG...AGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR GCA 90 bp CTCCTGCTAGCTGGGGCATCAGGGCACTCACCATGTCCCTGCACAAGATGCTCAAGCGCAAAGAGGCCCTaGGTTCTGGTTTCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: LLLAGASGHSPCPCTRCSSAKRP*VLVSGD
Trigger: ATCCCCTGAAACCAGAACGCAGGGCCTCTTTGCGCT...TGAGCATCTTGTGCAGGGACATGGTGAGTGCCCTGATGCCCCAGCTAGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp GTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTCCTGGCCTGCTGCGCTaGGCATTAAAGCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: VPCPCTRCSPTPPSHPGAPGLLR*ALKLPV
Trigger: AACTGGAAGCTTTAATGCCCAGCGCAGCAGGCCAGG...AGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp AACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGTCCTCTCCCGGGTCCTaGAACGTGATCGAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: NPEGRVHTRRERELAEKQSSPGS*NVIESG
Trigger: CCCGCTCTCGATCACGTTCCAGGACCCGGGAGAGGA...CTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp CTCAGACAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCCGACATCAGCTACATTaGCCACACGACCCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: LRQNQEALSLMKGQGSAARHQLH*PHDPPA
Trigger: GGCGGGAGGGTCGTGTGGCCAATGTAGCTGATGTCG...GGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTGTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp GTAACAGCTAAGCAGAGAGGAGTCAGGAAGCACGGAGAAGACTCTTGGGGCTGGCGACATCAGCTACATTaGCCACACGACCCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: VTAKQRGVRKHGEDSWGWRHQLH*PHDPPA
Trigger: GGCGGGAGGGTCGTGTGGCCAATGTAGCTGATGTCG...CCAGCCCCAAGAGTCTTCTCCGTGCTTCCTGACTCCTCTCTGCTTAGCTGTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp AAGGCTGGAAGTCTGGGTTGTACGTCGTTTCCGAGCGCAAAGAGGCCCTGCGTTATCTCAGCTTCCCGCTaGGCCTGTTTGAGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: KAGSLGCTSFPSAKRPCVISASR*ACLSSR
Trigger: GCGGGAACTCAAACAGGCCCAGCGGGAAGCTGAGAT...AACGCAGGGCCTCTTTGCGCTCGGAAACGACGTACAACCCAGACTTCCAGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp CGGGCAGCTGGTCCGACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGATCTCAGCTTCCCGCTaGGCCTGTTTGAGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: RAAGPTQGGNLFSDFSLQISASR*ACLSSR
Trigger: GCGGGAACTCAAACAGGCCCAGCGGGAAGCTGAGAT...CTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGTCGGACCAGCTGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp CGGGCAGCTGGTCCGACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGACCCAATCTTGCCCCTaGAAGTGTAGCCTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: RAAGPTQGGNLFSDFSLQTQSCP*KCSLPP
Trigger: CGGAGGCAGGCTACACTTCCAGGGGCAAGATTGGGT...CTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGTCGGACCAGCTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp AGTAGAGGTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCGCCACTCTTCTGGGCTaGGTACACCCAATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SRGPMSLHKMLTHSTFPSATLLG*VHPILP
Trigger: GGGCAAGATTGGGTGTACCCAGCCCAGAAGAGTGGC...GGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGACCTCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp AACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGTGCTTGCGAATGTCCTaGGCCCGGCGCAGGGAACGA +
Preference number: 4 (lower is better)
Translates to: NPEGRVHTRRERELAEKQCLRMS*ARRRER
Trigger: TCGTTCCCTGCGCCGGGCCCAGGACATTCGCAAGCA...CTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp CTCAGACAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCGTAGCTCCTGCTAGCTaGGGCATCAGGGCACTCACC +
Preference number: 4 (lower is better)
Translates to: LRQNQEALSLMKGQGSAAVAPAS*GIRALT
Trigger: GGTGAGTGCCCTGATGCCCCAGCTAGCAGGAGCTAC...GGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTGTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp CTCAGACAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCCCAAAGTACAGGGGCTaGAGACGGGGTGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LRQNQEALSLMKGQGSAAPKYRG*RRGGKW
Trigger: CCACTTCCCACCCCGTCTCCAGCCCCTGTACTTTGG...GGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTGTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp CTGGTTGGATTCTTCAGTGCGTTTTGGTGGGGCCTGAGGGTGTCGCTGGTGGGGGGTCTGATGGGGAAGTaGTGTGTTCAGGAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: LVGFFSAFWWGLRVSLVGGLMGK*CVQEVS
Trigger: GGAAACCTCCTGAACACACCACTTCCCCATCAGACC...CCCCACCAGCGACACCCTCAGGCCCCACCAAAACGCACTGAAGAATCCAACCAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR TCA 90 bp CTCAGACAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCGCGCTTGCGTTCCAGTaGGTCGTCCTCTACTTCAGG +
Preference number: 4 (lower is better)
Translates to: LRQNQEALSLMKGQGSAAALAFQ*VVLYFR
Trigger: CCTGAAGTAGAGGACGACTCACTGGAACGCAAGCGC...GGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTGTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp GACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGGCTACGCGCTTGCGTTCCAGTaGGTCGTCCTCTACTTCAGG +
Preference number: 4 (lower is better)
Translates to: DSCILRTSLSSISPSPGYALAFQ*VVLYFR
Trigger: CCTGAAGTAGAGGACGACTCACTGGAACGCAAGCGC...GTAGCCAGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR TCA 90 bp GTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTCCATTCAGAAAACCGTaGGTAGAGGTCCCATGTCCC +
Preference number: 4 (lower is better)
Translates to: VPCPCTRCSPTPPSHPGAPFRKP*VEVPCP
Trigger: GGGACATGGGACCTCTACTCACGGTTTTCTGAATGG...AGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR TCA 90 bp GTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTACTTACCCCACAACATaGGGAGTCTGGTGTGACTGC +
Preference number: 4 (lower is better)
Translates to: VPCPCTRCSPTPPSHPGATYPTT*GVWCDC
Trigger: GCAGTCACACCAGACTCCTCATGTTGTGGGGTAAGT...AGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR GCA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGGAGGGCGGTCCACATaGTTATCCCGCCATCTATCC +
Preference number: 4 (lower is better)
Translates to: SRDSCILRTSLSSISPSPGGRST*LSRHLS
Trigger: GGATAGATGGCGGGATAAGCATGTGGACCGCCCTCC...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp AGTAGAGGTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCACTCTGCATCATTGCTaGTTGGGAGAGGGAGCCGTC +
Preference number: 4 (lower is better)
Translates to: SRGPMSLHKMLTHSTFPSTLHHC*LGEGAV
Trigger: GACGGCTCCCTCTCCCAAGCAGCAATGATGCAGAGT...GGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGACCTCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR GCA 90 bp GTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTTTGGCCAAGGCACTCTaGATCATTGCTGCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: VPCPCTRCSPTPPSHPGALAKAL*IIAAWE
Trigger: CTCCCAAGCAGCAATGATGCAGAGTGCCTTGGCCAA...AGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR GCA 90 bp CCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTACTGTCTCTCCCCAGAAGGCCCTGGAAGTGTAGCCTaGCTCCGCCAGGTACTGGGT +
Preference number: 4 (lower is better)
Translates to: PFPLWFHLRSLYCLSPEGPGSVA*LRQVLG
Trigger: ACCCAGTACCTGGCGGAGGCAGGCTACACTTCCAGG...GCCTTCTGGGGAGAGACAGTACAGGGACCTCAAATGAAACCAAAGGGGAAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp CCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTACTGTCTCTCCCCAGAAGGCGGCCACCGACATAGCTaGCACTCTTCTGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PFPLWFHLRSLYCLSPEGGHRHS*HSSGLG
Trigger: ACCCAGCCCAGAAGAGTGGCAGCTATGTCGGTGGCC...GCCTTCTGGGGAGAGACAGTACAGGGACCTCAAATGAAACCAAAGGGGAAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTTGCCTAACATCTGCTTaGGAATGTCCTGGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: SRDSCILRTSLSSISPSPCLTSA*ECPGPG
Trigger: GCCGGGCCCAGGACATTCGCAAGCAGATGTTAGGCA...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp GGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGCTGCAGATGGCCTTCTaGACTCGGACTGTGGACTTG +
Preference number: 4 (lower is better)
Translates to: GRVHTRRERELAEKQHPGLQMAF*TRTVDL
Trigger: CAAGTCCACAGTCCGAGTGCAGAAGGCCATCTGCAG...CCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp CCAGCTTTCCGTAAGTTCCGAAACCTGGCCTGGCAAGACCTGCCTGATGTTCCGAAGGAGCCTCCTCAGTaGAGAGGACAGTGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: PAFRKFRNLAWQDLPDVPKEPPQ*RGQWLS
Trigger: TGAGAGCCACTGTCCTCTGCACTGAGGAGGCTCCTT...CGGAACATCAGGCAGGTCTTGCCAGGCCAGGTTTCGGAACTTACGGAAAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp AGTAGAGGTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCACAGGTACTCGAGTTTaGCAAGTTCTTCCGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SRGPMSLHKMLTHSTFPSTGTRV*QVLPRG
Trigger: GCCCCGCGGAAGAACTTGCCAAACTCGAGTACCTGT...GGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGACCTCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp AAGGCTGGAAGTCTGGGTTGTACGTCGTTTCCGAGCGCAAAGAGGCCCTGCGTTTCTCTTTGCTTCTCCTaGCCTGCTGCGCTGGGCATT +
Preference number: 4 (lower is better)
Translates to: KAGSLGCTSFPSAKRPCVSLCFS*PAALGI
Trigger: AATGCCCAGCGCAGCAGGCCAGGAGAAGCAAAGAGA...AACGCAGGGCCTCTTTGCGCTCGGAAACGACGTACAACCCAGACTTCCAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp GAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGTCCTTCCGGTCTTTaGGGGGACTCTGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: EGRVHTRRERELAEKQHPGPSGL*GDSDSC
Trigger: GCAGGAGTCAGAGTCCCCCCAAAGACCGGAAGGACC...TGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp GTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTGCCTCCGCCAGGTACTaGGTGATCTGTGTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: VPCPCTRCSPTPPSHPGAASARY*VICVVF
Trigger: AAAGACAACACAGATCACCCAGTACCTGGCGGAGGC...AGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp GCCCTGCAGCACAGATACTGGCAGCACAAACCAGCTGAGAGGAGAGGTGTTATGACCCAATCTTGCCCCTaGAAGTGTAGCCTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: ALQHRYWQHKPAERRGVMTQSCP*KCSLPP
Trigger: CGGAGGCAGGCTACACTTCCAGGGGCAAGATTGGGT...CATAACACCTCTCCTCTCAGCTGGTTTGTGCTGCCAGTATCTGTGCTGCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp CTCCTGCTAGCTGGGGCATCAGGGCACTCACCATGTCCCTGCACAAGATGCTCAGGGTCTGCATCTCACTaGGAAGAGCAGAGTACACTG +
Preference number: 4 (lower is better)
Translates to: LLLAGASGHSPCPCTRCSGSASH*EEQSTL
Trigger: CAGTGTACTCTGCTCTTCCCAGTGAGATGCAGACCC...TGAGCATCTTGTGCAGGGACATGGTGAGTGCCCTGATGCCCCAGCTAGCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGCTGCCTGGTGGAGCTaGGTCAAAGATTCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SRDSCILRTSLSSISPSPAAWWS*VKDSGL
Trigger: CAGACCCGAATCTTTGACCCAGCTCCACCAGGCAGC...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CCA 90 bp CTGGTTGGATTCTTCAGTGCGTTTTGGTGGGGCCTGAGGGTGTCGCTGGTGGGGTCTGCACTCGGACTGTaGACTTGCCACAGGAAACAA +
Preference number: 4 (lower is better)
Translates to: LVGFFSAFWWGLRVSLVGSALGL*TCHRKQ
Trigger: TTGTTTCCTGTGGCAAGTCCACAGTCCGAGTGCAGA...CCCCACCAGCGACACCCTCAGGCCCCACCAAAACGCACTGAAGAATCCAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR CCA 90 bp GTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTTCCACCTTCCCATCCTaGAGCTGCACAAATTGTCCC +
Preference number: 4 (lower is better)
Translates to: VPCPCTRCSPTPPSHPGASTFPS*SCTNCP
Trigger: GGGACAATTTGTGCAGCTCCAGGATGGGAAGGTGGA...AGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp GCCCTGCAGCACAGATACTGGCAGCACAAACCAGCTGAGAGGAGAGGTGTTATGGCCTGGGCAGCACAGTaGGAACCCATCTCTATGGGA +
Preference number: 4 (lower is better)
Translates to: ALQHRYWQHKPAERRGVMAWAAQ*EPISMG
Trigger: TCCCATAGAGATGGGTTCCCACTGTGCTGCCCAGGC...CATAACACCTCTCCTCTCAGCTGGTTTGTGCTGCCAGTATCTGTGCTGCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp CCAGCTTTCCGTAAGTTCCGAAACCTGGCCTGGCAAGACCTGCCTGATGTTCCGGTAAGTTCCGAAACCTaGCCTGGCAAGACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PAFRKFRNLAWQDLPDVPVSSET*PGKTCL
Trigger: CAGGCAGGTCTTGCCAGGCCAGGTTTCGGAACTTAC...CGGAACATCAGGCAGGTCTTGCCAGGCCAGGTTTCGGAACTTACGGAAAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGAAGACTCTTGGGGCTaGCTCAGAGGCAGACGAGAG +
Preference number: 4 (lower is better)
Translates to: SRDSCILRTSLSSISPSPEDSWG*LRGRRE
Trigger: CTCTCGTCTGCCTCTGAGCCAGCCCCAAGAGTCTTC...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR TCA 90 bp AAGGCTGGAAGTCTGGGTTGTACGTCGTTTCCGAGCGCAAAGAGGCCCTGCGTTCTACTTCAGGAGCACTaGCAAGGGACAAGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: KAGSLGCTSFPSAKRPCVLLQEH*QGTSEW
Trigger: CCACTCACTTGTCCCTTGTCAGTGCTCCTGAAGTAG...AACGCAGGGCCTCTTTGCGCTCGGAAACGACGTACAACCCAGACTTCCAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp AACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGGCGCTTGCGTTCCAGTaGGTCGTCCTCTACTTCAGG +
Preference number: 4 (lower is better)
Translates to: NPEGRVHTRRERELAEKQALAFQ*VVLYFR
Trigger: CCTGAAGTAGAGGACGACTCACTGGAACGCAAGCGC...CTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp GGTGTAAAAATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGCCCGCTGGGCCTGTTTaGGTTCCCGCCTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GVKIGGNPEGRVHTRRERPAGPV*VPAFLW
Trigger: CCAAAGAAAGGCGGGAACTCAAACAGGCCCAGCGGG...CCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGATTTTTACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp GTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTACAACCAAACTCCTCTaGCACTCTTTTGGCCACCGA +
Preference number: 4 (lower is better)
Translates to: VPCPCTRCSPTPPSHPGATTKLL*HSFGHR
Trigger: TCGGTGGCCAAAAGAGTGTCAGAGGAGTTTGGTTGT...AGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR TCA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGGCGGCCCAAGCGAGTaGGCAGGCCCTCGTCATCCA +
Preference number: 4 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCGGPSE*AGPRHP
Trigger: TGGATGACGAGGGCCTGCTCACTCGCTTGGGCCGCC...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR TCA 90 bp CGCAAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTACACAGCTAGCAGGGTaGGGTGGTCCCCTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: RKEALRSGFRGFRGFSSCTQLAG*GGPLQS
Trigger: AGACTGAAGGGGACCACCTCACCCTGCTAGCTGTGT...ACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp CTCAGACAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCTGGAGAGGACATGGTTaGTCATCGGGTGATCCCCCA +
Preference number: 4 (lower is better)
Translates to: LRQNQEALSLMKGQGSAAWRGHG*SSGDPP
Trigger: TGGGGGATCACCCGATGATCAACCATGTCCTCTCCA...GGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTGTCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp GTAACAGCTAAGCAGAGAGGAGTCAGGAAGCACGGAGAAGACTCTTGGGGCTGGATGAGGAGTCTGGTGTaGCTGCAGCGTAGGATCCAC +
Preference number: 4 (lower is better)
Translates to: VTAKQRGVRKHGEDSWGWMRSLV*LQRRIH
Trigger: GTGGATCCTACGCTGCAGTCACACCAGACTCCTCAT...CCAGCCCCAAGAGTCTTCTCCGTGCTTCCTGACTCCTCTCTGCTTAGCTGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR GCA 90 bp AACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGGGAGGGCGGTCCACATaGTTATCCCGCCATCTATCC +
Preference number: 4 (lower is better)
Translates to: NPEGRVHTRRERELAEKQGGRST*LSRHLS
Trigger: GGATAGATGGCGGGATAAGCATGTGGACCGCCCTCC...CTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp GGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTGGCACTCTGCATCATTaGTGCTTGGGAGAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GKERSPQAEMMALCPLNCGTLHH*CLGEGA
Trigger: GGCTCCCTCTCCCAAGCAGCAATGATGCAGAGTGCC...ACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp GACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGGCTACTGGCAGCAATCTGTCTaGCTTCCGCATCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: DSCILRTSLSSISPSPGYWQQSV*LPHQAE
Trigger: CTCTGCCTGATGCGGAAGGCAGACAGATTGCTGCCA...GTAGCCAGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp GACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGGCTACGGCAGGCTCTCCCTCTaGTCAAGGATTGACATCTGG +
Preference number: 4 (lower is better)
Translates to: DSCILRTSLSSISPSPGYGRLSL*SRIDIW
Trigger: CCAGATGTCAATCCTTGAGCAGAGGGAGAGCCTGCC...GTAGCCAGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp AGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGCCTGGAAGTGTAGCCTaGCTCCGCCAGGTACTGGGT +
Preference number: 4 (lower is better)
Translates to: RELAEKQHPGKERSPQAEPGSVA*LRQVLG
Trigger: ACCCAGTACCTGGCGGAGGCAGGCTACACTTCCAGG...CTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp CAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCAGCAGAGGGTACACCCAATCTTaGCCCTGGAAGTGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: QNQEALSLMKGQGSAASRGYTQS*PWKCSL
Trigger: CAGGCTACACTTCCAGGGGCAAGATTGGGTGTACCC...TCTGCTGGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGGGTACACCCAATCTTaGCCCTGGAAGTGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: SRDSCILRTSLSSISPSPGYTQS*PWKCSL
Trigger: CAGGCTACACTTCCAGGGGCAAGATTGGGTGTACCC...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp CGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCAGGCCACCGACATAGCTaGCACTCTTCTGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: RRERELAEKQHPGKERSPGHRHS*HSSGLG
Trigger: ACCCAGCCCAGAAGAGTGGCAGCTATGTCGGTGGCC...TGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp CGGGCAGCTGGTCCGACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGTCACAACCTTTCTGCTaGCTGGTGGAGCTGGGTCAA +
Preference number: 4 (lower is better)
Translates to: RAAGPTQGGNLFSDFSLQSQPFC*LVELGQ
Trigger: TTGACCCAGCTCCACCAGGCAGCAGAAAGGTTGTGA...CTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGTCGGACCAGCTGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR GCA 90 bp CCAGCTTTCCGTAAGTTCCGAAACCTGGCCTGGCAAGACCTGCCTGATGTTCCGCAATCACAACCTTTCTaGTGCCTGGTGGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PAFRKFRNLAWQDLPDVPQSQPF*CLVELG
Trigger: ACCCAGCTCCACCAGGCAGCAGAAAGGTTGTGATTG...CGGAACATCAGGCAGGTCTTGCCAGGCCAGGTTTCGGAACTTACGGAAAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp CTGGTTGGATTCTTCAGTGCGTTTTGGTGGGGCCTGAGGGTGTCGCTGGTGGGGATTATGCCTAACATCTaGTTGCGAATGTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LVGFFSAFWWGLRVSLVGIMPNI*LRMSWA
Trigger: GGCCCAGGACATTCGCAAGCAGATGTTAGGCATAAT...CCCCACCAGCGACACCCTCAGGCCCCACCAAAACGCACTGAAGAATCCAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR GCA 90 bp CCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTACTGTCTCTCCCCAGAAGGCTGGGGTGATGGAGGCTaGAGGCTCTTGCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: PFPLWFHLRSLYCLSPEGWGDGG*RLLPKP
Trigger: TGGCTTTGGCAAGAGCCTGCAGCCTCCATCACCCCA...GCCTTCTGGGGAGAGACAGTACAGGGACCTCAAATGAAACCAAAGGGGAAACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp GACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGGCTACGCCTCCAGACTGAAGTaGTCTGTGGAGAGGACATGG +
Preference number: 4 (lower is better)
Translates to: DSCILRTSLSSISPSPGYASRLK*SVERTW
Trigger: CCATGTCCTCTCCACAGAGCACTTCAGTCTGGAGGC...GTAGCCAGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp ATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTTGCGGAGCTCACACATaGCCCATAGGGACGGTCCAT +
Preference number: 4 (lower is better)
Translates to: IGGNPEGRVHTRRERELACGAHT*PIGTVH
Trigger: ATGGACCGTCCCTATGGGGCATGTGTGAGCTCCGCA...AGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587574.1
CDS-3UTR CCA 90 bp CTCAGACAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCACAGGTACTCGAGTTTaGCAAGTTCTTCCGCGGGGC +
Preference number: 4 (lower is better)
Translates to: LRQNQEALSLMKGQGSAATGTRV*QVLPRG
Trigger: GCCCCGCGGAAGAACTTGCCAAACTCGAGTACCTGT...GGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTGTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp CTCAGACAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCCCTGGCCTGCTGCGCTaGGCATTAAAGCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LRQNQEALSLMKGQGSAAPGLLR*ALKLPV
Trigger: AACTGGAAGCTTTAATGCCCAGCGCAGCAGGCCAGG...GGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTGTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp GAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCAATGGTGGGCTCTTCTaGAGGAGGGCGGTCCACATG +
Preference number: 4 (lower is better)
Translates to: EKQHPGKERSPQAEMMALNGGLF*RRAVHM
Trigger: CATGTGGACCGCCCTCCTCCAGAAGAGCCCACCATT...GAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp CCAGCTTTCCGTAAGTTCCGAAACCTGGCCTGGCAAGACCTGCCTGATGTTCCGGATCTCCCACTTCTCTaGGTCAGAGATTCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PAFRKFRNLAWQDLPDVPDLPLL*VRDSGE
Trigger: CTCACCCGAATCTCTGACCCAGAGAAGTGGGAGATC...CGGAACATCAGGCAGGTCTTGCCAGGCCAGGTTTCGGAACTTACGGAAAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp GAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCATCATTGCTGCTTaGGAGAGGGAGCCGTCTGGG +
Preference number: 4 (lower is better)
Translates to: EKQHPGKERSPQAEMMALCIIAA*EREPSG
Trigger: CCCAGACGGCTCCCTCTCCCAAGCAGCAATGATGCA...GAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp GTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTTTGTCATGGACGGCCTaGACCAATTGCTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: VPCPCTRCSPTPPSHPGALSWTA*TNCSFS
Trigger: ACTGAAGGAGCAATTGGTCCAGGCCGTCCATGACAA...AGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp GGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTACCCAATCTTGCCCCTaGAAGTGTAGCCTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: GKERSPQAEMMALCPLNCTQSCP*KCSLPP
Trigger: CGGAGGCAGGCTACACTTCCAGGGGCAAGATTGGGT...ACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp CCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTACTGTCTCTCCCCAGAAGGCGCTGCCTGGTGGAGCTaGGTCAAAGATTCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PFPLWFHLRSLYCLSPEGAAWWS*VKDSGL
Trigger: CAGACCCGAATCTTTGACCCAGCTCCACCAGGCAGC...GCCTTCTGGGGAGAGACAGTACAGGGACCTCAAATGAAACCAAAGGGGAAACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTAGAACCCACTGCAGATaGCCTTCTGCACTCGGACTG +
Preference number: 4 (lower is better)
Translates to: SRDSCILRTSLSSISPSPRTHCR*PSALGL
Trigger: CAGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCT...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CCA 90 bp GGAGGTGGGTGCCCAGTCCCCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTAGACCTTGAAGAAGGCTaGGGCAAACTCCACAAGCCA +
Preference number: 4 (lower is better)
Translates to: GGGCPVPVSPLVSFEVPVDLEEG*GKLHKP
Trigger: TGGCTTGTGGAGTTTGCCCCAGCCTTCTTCAAGGTC...TACAGGGACCTCAAATGAAACCAAAGGGGAAACGGGGACTGGGCACCCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp GGAGGTGGGTGCCCAGTCCCCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTATCCACCTTCCCATCCTaGAGCTGCACAAATTGTCCC +
Preference number: 4 (lower is better)
Translates to: GGGCPVPVSPLVSFEVPVSTFPS*SCTNCP
Trigger: GGGACAATTTGTGCAGCTCCAGGATGGGAAGGTGGA...TACAGGGACCTCAAATGAAACCAAAGGGGAAACGGGGACTGGGCACCCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp CAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCAGCAGATGCACATTGCGAATGTaGGAGGTGGAGGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: QNQEALSLMKGQGSAASRCTLRM*EVEGAR
Trigger: CCTTGCTCCCTCCACCTCCCACATTCGCAATGTGCA...TCTGCTGGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp ACTGCTCCAATGAGACAGCTACAGCAACCACAGGGAGGAAGTGCTTTGGGCTGCAGGGAGGAAGTGCTTTaGGCTGCAGGAGAGACAGTC +
Preference number: 4 (lower is better)
Translates to: TAPMRQLQQPQGGSALGCREEVL*AAGETV
Trigger: GACTGTCTCTCCTGCAGCCCAAAGCACTTCCTCCCT...GCAGCCCAAAGCACTTCCTCCCTGTGGTTGCTGTAGCTGTCTCATTGGAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587574.1
CDS-3UTR CCA 90 bp CCCTCCCCAAATAGCCTTGATTGTAATTCTAATAGCAAGTGTTCCTCCCTCTTCGTGAGCTGGCTGGGGTaGGGTCCGTGGCTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: PSPNSLDCNSNSKCSSLFVSWLG*GPWLGP
Trigger: CGGACCCAGCCACGGACCCCACCCCAGCCAGCTCAC...GAAGAGGGAGGAACACTTGCTATTAGAATTACAATCAAGGCTATTTGGGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR CCA 90 bp AGTAGAGGTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCAAGGAGCTCACAGTTTaGTGGGGGACACAGACCTGT +
Preference number: 4 (lower is better)
Translates to: SRGPMSLHKMLTHSTFPSKELTV*WGTQTC
Trigger: ACAGGTCTGTGTCCCCCACCAAACTGTGAGCTCCTT...GGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGACCTCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650571.1
3UTR CAA 72 bp AGTGCTGATGCTGAAAGACAAGGCTGGAAGTCTGGGTaGTACGTCGTTTCCGAGCGCAAAGAGGCCCTGCGT +
Preference number: 4 (lower is better)
Translates to: SADAERQGWKSG*YVVSERKEALR
Trigger: ACGCAGGGCCTCTTTGCGCTCGGAAACGACGTACAACCCAGACTTCCAGCCTTGTCTTTCAGCATCAGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp AGTAGAGGTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCCAAGGTCCTTGTCGTTaGTCCCCAAGTGATTGTCCA +
Preference number: 4 (lower is better)
Translates to: SRGPMSLHKMLTHSTFPSQGPCR*SPSDCP
Trigger: TGGACAATCACTTGGGGATCAACGACAAGGACCTTG...GGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGACCTCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR TCA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTCCGGGTCCTGGAACGTaGTCGAGAGCGGGATCGGTG +
Preference number: 4 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCPGPGT*SRAGSV
Trigger: CACCGATCCCGCTCTCGATCACGTTCCAGGACCCGG...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR TCA 90 bp AAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTTCAGGTCAGAGATTCGGGTaGGGCGCTTGCGTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: KERSPQAEMMALCPLNCSGQRFG*GACVPV
Trigger: CACTGGAACGCAAGCGCCTCACCCGAATCTCTGACC...TGAACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp AGTAGAGGTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCATGATGATCGCGTACTaGGTGAGGTCAGGGTCAATC +
Preference number: 4 (lower is better)
Translates to: SRGPMSLHKMLTHSTFPSMMIAY*VRSGSI
Trigger: GATTGACCCTGACCTCACTCAGTACGCGATCATCAT...GGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGACCTCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR TCA 90 bp CTCAGACAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCCCAAGGTGGCTGAGGTaGCAATCAGCTTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: LRQNQEALSLMKGQGSAAPRWLR*QSASCP
Trigger: AGGACATGAAGCTGATTGTCACCTCAGCCACCTTGG...GGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTGTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp CGGGCAGCTGGTCCGACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGATTCTGGCTGTCTGTTaGAGAGGGCACTGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: RAAGPTQGGNLFSDFSLQILAVC*RGHWKD
Trigger: ATCCTTCCAGTGCCCTCTTCAACAGACAGCCAGAAT...CTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGTCGGACCAGCTGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR TCA 90 bp CGGGCAGCTGGTCCGACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGTGTATTCCTTGGTGGTaGGCACCAGCTCATGGTACA +
Preference number: 4 (lower is better)
Translates to: RAAGPTQGGNLFSDFSLQCIPWW*APAHGT
Trigger: TGTACCATGAGCTGGTGCTCACCACCAAGGAATACA...CTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGTCGGACCAGCTGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR TCA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTAAATCTCCCTCACCCTaGGCCCAGGCCAATATCCTA +
Preference number: 4 (lower is better)
Translates to: SRDSCILRTSLSSISPSPKSPSP*AQANIL
Trigger: TAGGATATTGGCCTGGGCTCAGGGTGAGGGAGATTT...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp ATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTAATCGGTGGAAACCCTaGAGGCCGAGTACACACACG +
Preference number: 4 (lower is better)
Translates to: IGGNPEGRVHTRRERELANRWKP*RPSTHT
Trigger: CGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGATT...AGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540306.5
ENST00000587574.1
CDS-3UTR GCA 90 bp CTCAGACAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCGCCATGGCTATAGCTTaGCCAGAACCTCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LRQNQEALSLMKGQGSAAAMAIA*PEPPSS
Trigger: TGAGGAAGGAGGTTCTGGGCAAGCTATAGCCATGGC...GGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTGTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp AGCTGTGAGGAGGGCACAAGGAGGTGGCTATTCTCCAAGCAAGTGCTAGGAAAAGGAGGGCGGTCCACATaGTTATCCCGCCATCTATCC +
Preference number: 4 (lower is better)
Translates to: SCEEGTRRWLFSKQVLGKGGRST*LSRHLS
Trigger: GGATAGATGGCGGGATAAGCATGTGGACCGCCCTCC...TTTTCCTAGCACTTGCTTGGAGAATAGCCACCTCCTTGTGCCCTCCTCACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp CGGGCAGCTGGTCCGACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGCTCATGTCCATGCTTTaGTTAGTGTGCCCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: RAAGPTQGGNLFSDFSLQLMSML*LVCPLR
Trigger: CCTGAGAGGGCACACTAAGCAAAGCATGGACATGAG...CTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGTCGGACCAGCTGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR GCA 90 bp GGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTACTCTGCATCATTGCTaGTTGGGAGAGGGAGCCGTC +
Preference number: 4 (lower is better)
Translates to: GKERSPQAEMMALCPLNCTLHHC*LGEGAV
Trigger: GACGGCTCCCTCTCCCAAGCAGCAATGATGCAGAGT...ACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp AGTAGAGGTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCCGTAAGAGGCTTTGTTaGCCCCAAAGGCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: SRGPMSLHKMLTHSTFPSRKRLC*PQRHAS
Trigger: AGAAGCATGCCTTTGGGGGCAACAAAGCCTCTTACG...GGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGACCTCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR GCA 90 bp GAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCGGCAGGCTCTCCCTCTaGTCAAGGATTGACATCTGG +
Preference number: 4 (lower is better)
Translates to: EKQHPGKERSPQAEMMALGRLSL*SRIDIW
Trigger: CCAGATGTCAATCCTTGAGCAGAGGGAGAGCCTGCC...GAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp GAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGTACACCCAATCTTaGCCCTGGAAGTGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: EGRVHTRRERELAEKQHPGYTQS*PWKCSL
Trigger: CAGGCTACACTTCCAGGGGCAAGATTGGGTGTACCC...TGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp GACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGGCTACTCACAACCTTTCTGCTaGCTGGTGGAGCTGGGTCAA +
Preference number: 4 (lower is better)
Translates to: DSCILRTSLSSISPSPGYSQPFC*LVELGQ
Trigger: TTGACCCAGCTCCACCAGGCAGCAGAAAGGTTGTGA...GTAGCCAGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTCAATCACAACCTTTCTaGTGCCTGGTGGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SRDSCILRTSLSSISPSPQSQPF*CLVELG
Trigger: ACCCAGCTCCACCAGGCAGCAGAAAGGTTGTGATTG...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGCCAGCTCGTTGCTTTaGCTGAGCCTGAGAAATAGG +
Preference number: 4 (lower is better)
Translates to: SRDSCILRTSLSSISPSPASSLL*LSLRNR
Trigger: CCTATTTCTCAGGCTCAGGCAAAGCAACGAGCTGGC...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp GGTGTAAAAATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGTGCCTAACATCTGCTTaGGAATGTCCTGGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: GVKIGGNPEGRVHTRRERCLTSA*ECPGPG
Trigger: GCCGGGCCCAGGACATTCGCAAGCAGATGTTAGGCA...CCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGATTTTTACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp CGGGCAGCTGGTCCGACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGCTCGGACTGTGGACTTaGCACAGGAAACAACATCCA +
Preference number: 4 (lower is better)
Translates to: RAAGPTQGGNLFSDFSLQLGLWT*HRKQHP
Trigger: TGGATGTTGTTTCCTGTGGCAAGTCCACAGTCCGAG...CTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGTCGGACCAGCTGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR GCA 90 bp GCCCTGCAGCACAGATACTGGCAGCACAAACCAGCTGAGAGGAGAGGTGTTATGTACGGAAGAACCCACTaGAGATGGCCTTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: ALQHRYWQHKPAERRGVMYGRTH*RWPSAL
Trigger: GAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCCGTA...CATAACACCTCTCCTCTCAGCTGGTTTGTGCTGCCAGTATCTGTGCTGCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp CGCAAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGGACATGCTGCACATTaGGAATGTGGGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RKEALRSGFRGFRGFSSCGHAAH*ECGRWR
Trigger: CCTCCACCTCCCACATTCGCAATGTGCAGCATGTCC...ACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp CGCAAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTCAGAGGCAGGAGGATTaGTTGACGCCAGGGATTGGA +
Preference number: 4 (lower is better)
Translates to: RKEALRSGFRGFRGFSSCQRQED*LTPGIG
Trigger: TCCAATCCCTGGCGTCAAGCAATCCTCCTGCCTCTG...ACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp GTGGCTGGGTCTGATGGGGAAGTGGTGTGTTCAGGAGGTTTCCTGGTTGGATTCGGTTGGATTCTTCAGTaGGTTTTGGTGGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: VAGSDGEVVCSGGFLVGFGWILQ*VLVGPE
Trigger: CTCAGGCCCCACCAAAACGCACTGAAGAATCCAACC...GAATCCAACCAGGAAACCTCCTGAACACACCACTTCCCCATCAGACCCAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR CCA 90 bp TCCAACATGGTCCGAACAGAAGGGTTGTCCGGTTGGCAAAGGACTGGGAAGAGTACAGGTACTCGAGTTTaGCAAGTTCTTCCGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SNMVRTEGLSGWQRTGKSTGTRV*QVLPRG
Trigger: GCCCCGCGGAAGAACTTGCCAAACTCGAGTACCTGT...ACTCTTCCCAGTCCTTTGCCAACCGGACAACCCTTCTGTTCGGACCATGTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592258.5
CDS-3UTR CCA 90 bp ATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTCCTGGCCTGCTGCGCTaGGCATTAAAGCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: IGGNPEGRVHTRRERELAPGLLR*ALKLPV
Trigger: AACTGGAAGCTTTAATGCCCAGCGCAGCAGGCCAGG...AGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp TCCGAACAGAAGGGTTGTCCGGTTGGCAAAGGACTGGGAAGAGTTCCTTCAGCTCCTGGCCTGCTGCGCTaGGCATTAAAGCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: SEQKGCPVGKGLGRVPSAPGLLR*ALKLPV
Trigger: AACTGGAAGCTTTAATGCCCAGCGCAGCAGGCCAGG...AGCTGAAGGAACTCTTCCCAGTCCTTTGCCAACCGGACAACCCTTCTGTTCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592258.5
CDS-3UTR CCA 90 bp ATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTTCTCTTTGCTTCTCCTaGCCTGCTGCGCTGGGCATT +
Preference number: 4 (lower is better)
Translates to: IGGNPEGRVHTRRERELASLCFS*PAALGI
Trigger: AATGCCCAGCGCAGCAGGCCAGGAGAAGCAAAGAGA...AGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp AAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGTGAATGGTGGGCTCTTCTaGAGGAGGGCGGTCCACATG +
Preference number: 4 (lower is better)
Translates to: KEALRSGFRGFRGFSSCVNGGLF*RRAVHM
Trigger: CATGTGGACCGCCCTCCTCCAGAAGAGCCCACCATT...CACACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp GAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGCGACATCAGCTACATTaGCCACACGACCCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: ELAEKQHPGKERSPQAEMRHQLH*PHDPPA
Trigger: GGCGGGAGGGTCGTGTGGCCAATGTAGCTGATGTCG...CATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp GTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTTTGACTTTGACCCTCTaGCCTTTGCTCACGACATCA +
Preference number: 4 (lower is better)
Translates to: VPCPCTRCSPTPPSHPGALTLTL*PLLTTS
Trigger: TGATGTCGTGAGCAAAGGCCAGAGGGTCAAAGTCAA...AGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGTTCCCGCCTTTCTTTaGCCAAGGCACTCTGCATCA +
Preference number: 4 (lower is better)
Translates to: SRDSCILRTSLSSISPSPVPAFL*PRHSAS
Trigger: TGATGCAGAGTGCCTTGGCCAAAGAAAGGCGGGAAC...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CCA 90 bp GACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGGCTACCCTTCAGTTTGTAGATaGGCAGGCTCTCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: DSCILRTSLSSISPSPGYPSVCR*AGSPSA
Trigger: AGCAGAGGGAGAGCCTGCCCATCTACAAACTGAAGG...GTAGCCAGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CCA 90 bp CTCAGACAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCGCCTCCGCCAGGTACTaGGTGATCTGTGTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: LRQNQEALSLMKGQGSAAASARY*VICVVF
Trigger: AAAGACAACACAGATCACCCAGTACCTGGCGGAGGC...GGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTGTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp CGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCAGCTGCCTGGTGGAGCTaGGTCAAAGATTCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: RRERELAEKQHPGKERSPAAWWS*VKDSGL
Trigger: CAGACCCGAATCTTTGACCCAGCTCCACCAGGCAGC...TGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp GAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCGGCGTCACCACGAGCTaGTCAATCCCTGTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: EKQHPGKERSPQAEMMALGVTTS*SIPVLE
Trigger: TTCCAAGACAGGGATTGACCAGCTCGTGGTGACGCC...GAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp AAGGCTGGAAGTCTGGGTTGTACGTCGTTTCCGAGCGCAAAGAGGCCCTGCGTTTGGTCCCCTTCAGTCTaGTGGAATTTGGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KAGSLGCTSFPSAKRPCVWSPSV*WNLAFF
Trigger: GAAGAAGGCCAAATTCCACCAGACTGAAGGGGACCA...AACGCAGGGCCTCTTTGCGCTCGGAAACGACGTACAACCCAGACTTCCAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp CTGGTTGGATTCTTCAGTGCGTTTTGGTGGGGCCTGAGGGTGTCGCTGGTGGGGCATAGCACCATGGGTTaGAGAACTTGTTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LVGFFSAFWWGLRVSLVGHSTMG*RTCCSS
Trigger: GGAAGAACAACAAGTTCTCCAACCCATGGTGCTATG...CCCCACCAGCGACACCCTCAGGCCCCACCAAAACGCACTGAAGAATCCAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR CCA 90 bp AGTAGAGGTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTCTGCACTCGGACTGTaGACTTGCCACAGGAAACAA +
Preference number: 4 (lower is better)
Translates to: SRGPMSLHKMLTHSTFPSSALGL*TCHRKQ
Trigger: TTGTTTCCTGTGGCAAGTCCACAGTCCGAGTGCAGA...GGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGACCTCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp CCAGCTTTCCGTAAGTTCCGAAACCTGGCCTGGCAAGACCTGCCTGATGTTCCGCAGTGCAGAGGACAGTaGCTCTCAACTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: PAFRKFRNLAWQDLPDVPQCRGQ*LSTVIP
Trigger: TGGGATTACAGTTGAGAGCCACTGTCCTCTGCACTG...CGGAACATCAGGCAGGTCTTGCCAGGCCAGGTTTCGGAACTTACGGAAAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp CTCAGACAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCTTCCGAAACCTGGCCTaGCAAGACCTGCCTGATGTT +
Preference number: 4 (lower is better)
Translates to: LRQNQEALSLMKGQGSAAFRNLA*QDLPDV
Trigger: AACATCAGGCAGGTCTTGCCAGGCCAGGTTTCGGAA...GGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTGTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR CAA 72 bp AGCTTAATGAAGGGGCAGGGATCTGCAGCCAGCAGATaGCCTGGCCTATATTCCTCTCCCTCGGACTCTTTC +
Preference number: 4 (lower is better)
Translates to: SLMKGQGSAASR*PGLYSSPSDSF
Trigger: GAAAGAGTCCGAGGGAGAGGAATATAGGCCAGGCAATCTGCTGGCTGCAGATCCCTGCCCCTTCATTAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp GGAGGTGGGTGCCCAGTCCCCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTACTCAGTGCAAACCTTTaGCACCAAAGACAGGTACTC +
Preference number: 4 (lower is better)
Translates to: GGGCPVPVSPLVSFEVPVLSANL*HQRQVL
Trigger: GAGTACCTGTCTTTGGTGTCAAAGGTTTGCACTGAG...TACAGGGACCTCAAATGAAACCAAAGGGGAAACGGGGACTGGGCACCCACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp GACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGGCTACATCAGGATTCCGCATTaGGGTCTCCTCATTGGTCTC +
Preference number: 4 (lower is better)
Translates to: DSCILRTSLSSISPSPGYIRIPH*GLLIGL
Trigger: GAGACCAATGAGGAGACCTCAATGCGGAATCCTGAT...GTAGCCAGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR TCA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTCTGACAAGGGACAAGTaGGTGGGTCTATCAGGATTC +
Preference number: 4 (lower is better)
Translates to: SRDSCILRTSLSSISPSPLTRDK*VGLSGF
Trigger: GAATCCTGATAGACCCACTCACTTGTCCCTTGTCAG...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR TCA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTACAACCAAACTCCTCTaGCACTCTTTTGGCCACCGA +
Preference number: 4 (lower is better)
Translates to: SRDSCILRTSLSSISPSPTTKLL*HSFGHR
Trigger: TCGGTGGCCAAAAGAGTGTCAGAGGAGTTTGGTTGT...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR TCA 90 bp CTCAGACAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCATGATGATCGCGTACTaGGTGAGGTCAGGGTCAATC +
Preference number: 4 (lower is better)
Translates to: LRQNQEALSLMKGQGSAAMMIAY*VRSGSI
Trigger: GATTGACCCTGACCTCACTCAGTACGCGATCATCAT...GGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTGTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp CCAGCTTTCCGTAAGTTCCGAAACCTGGCCTGGCAAGACCTGCCTGATGTTCCGAAGAGCACATCAGTGTaGATTGTCCTCTCATGTGCC +
Preference number: 4 (lower is better)
Translates to: PAFRKFRNLAWQDLPDVPKSTSV*IVLSCA
Trigger: GGCACATGAGAGGACAATTCACACTGATGTGCTCTT...CGGAACATCAGGCAGGTCTTGCCAGGCCAGGTTTCGGAACTTACGGAAAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp ATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTCCAAGGTGGCTGAGGTaGCAATCAGCTTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: IGGNPEGRVHTRRERELAPRWLR*QSASCP
Trigger: AGGACATGAAGCTGATTGTCACCTCAGCCACCTTGG...AGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTTGCATCCAAGGTGGCTaGGGTGACAATCAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: SRDSCILRTSLSSISPSPCIQGG*GDNQLH
Trigger: ATGAAGCTGATTGTCACCTCAGCCACCTTGGATGCA...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR TCA 90 bp AAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTTCAACACAGCTAGCAGGGTaGGGTGGTCCCCTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: KERSPQAEMMALCPLNCSTQLAG*GGPLQS
Trigger: AGACTGAAGGGGACCACCTCACCCTGCTAGCTGTGT...TGAACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp GCCCTGCAGCACAGATACTGGCAGCACAAACCAGCTGAGAGGAGAGGTGTTATGTGTATTCCTTGGTGGTaGGCACCAGCTCATGGTACA +
Preference number: 4 (lower is better)
Translates to: ALQHRYWQHKPAERRGVMCIPWW*APAHGT
Trigger: TGTACCATGAGCTGGTGCTCACCACCAAGGAATACA...CATAACACCTCTCCTCTCAGCTGGTTTGTGCTGCCAGTATCTGTGCTGCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp GGAGGTGGGTGCCCAGTCCCCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTACCCTTTGGTTTCATTTaGGGTCCCTGTACTGTCTCT +
Preference number: 4 (lower is better)
Translates to: GGGCPVPVSPLVSFEVPVPFGFI*GPCTVS
Trigger: AGAGACAGTACAGGGACCTCAAATGAAACCAAAGGG...TACAGGGACCTCAAATGAAACCAAAGGGGAAACGGGGACTGGGCACCCACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp CGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCAAATCGGTGGAAACCCTaGAGGCCGAGTACACACACG +
Preference number: 4 (lower is better)
Translates to: RRERELAEKQHPGKERSPNRWKP*RPSTHT
Trigger: CGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGATT...TGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540306.5
ENST00000587574.1
CDS-3UTR TCA 90 bp CGGGCAGCTGGTCCGACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGAGGCAATTTGTTCTCTaGCTTCTCTCTGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: RAAGPTQGGNLFSDFSLQRQFVL*LLSAAQ
Trigger: CTGAGCTGCAGAGAGAAGTCAGAGAACAAATTGCCT...CTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGTCGGACCAGCTGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR GCA 90 bp ATCTTTGCTAGTGGAAGGCTTCGCTGGAGGCCGCATGGTTTGTATGAGACGCAGGCCATGGCTATAGCTTaGCCAGAACCTCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: IFASGRLRWRPHGLYETQAMAIA*PEPPSS
Trigger: TGAGGAAGGAGGTTCTGGGCAAGCTATAGCCATGGC...CTGCGTCTCATACAAACCATGCGGCCTCCAGCGAAGCCTTCCACTAGCAAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592258.5
CDS-3UTR GCA 90 bp AGAAGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACCGGAGCTCAGAGATGTaGACCAGGCCTTCCCACCGC +
Preference number: 4 (lower is better)
Translates to: RSFSTSTTSRPAFRKFRNRSSEM*TRPSHR
Trigger: GCGGTGGGAAGGCCTGGTGCACATCTCTGAGCTCCG...GTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTCGGAGCTCAGAGATGTaGACCAGGCCTTCCCACCGC +
Preference number: 4 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCRSSEM*TRPSHR
Trigger: GCGGTGGGAAGGCCTGGTGCACATCTCTGAGCTCCG...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp AACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGGATCCACATCCTTCATaGTCAGGCTGGTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: NPEGRVHTRRERELAEKQDPHPS*SGWSWS
Trigger: GGACCAAGACCAGCCTGAGCATGAAGGATGTGGATC...CTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp GACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGGCTACATGCTTTGCTTAGTGTaGCCTCTCAGGAATGGAGGC +
Preference number: 4 (lower is better)
Translates to: DSCILRTSLSSISPSPGYMLCLV*PLRNGG
Trigger: GCCTCCATTCCTGAGAGGGCACACTAAGCAAAGCAT...GTAGCCAGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp GCCCTGCAGCACAGATACTGGCAGCACAAACCAGCTGAGAGGAGAGGTGTTATGCTCATGTCCATGCTTTaGTTAGTGTGCCCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: ALQHRYWQHKPAERRGVMLMSML*LVCPLR
Trigger: CCTGAGAGGGCACACTAAGCAAAGCATGGACATGAG...CATAACACCTCTCCTCTCAGCTGGTTTGTGCTGCCAGTATCTGTGCTGCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp ACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGCTCAGGTACCAGACAGGCACTCTGCATCATTaGTGCTTGGGAGAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: TQGGNLFSDFSLQLRYQTGTLHH*CLGEGA
Trigger: GGCTCCCTCTCCCAAGCAGCAATGATGCAGAGTGCC...TGTCTGGTACCTGAGCTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR GCA 90 bp GGAGGTGGGTGCCCAGTCCCCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTAAGTCAGCGATGTCTCTaGGATATTGGTGGCAATCAC +
Preference number: 4 (lower is better)
Translates to: GGGCPVPVSPLVSFEVPVSQRCL*DIGGNH
Trigger: GTGATTGCCACCAATATCGCAGAGACATCGCTGACT...TACAGGGACCTCAAATGAAACCAAAGGGGAAACGGGGACTGGGCACCCACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp GGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTGCCAGCTCGTTGCTTTaGCTGAGCCTGAGAAATAGG +
Preference number: 4 (lower is better)
Translates to: GKERSPQAEMMALCPLNCASSLL*LSLRNR
Trigger: CCTATTTCTCAGGCTCAGGCAAAGCAACGAGCTGGC...ACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp AAGGCTGGAAGTCTGGGTTGTACGTCGTTTCCGAGCGCAAAGAGGCCCTGCGTTTCACTGCAGCCCAGATaGACAGACATGATGAGCATT +
Preference number: 4 (lower is better)
Translates to: KAGSLGCTSFPSAKRPCVSLQPR*TDMMSI
Trigger: AATGCTCATCATGTCTGTGCATCTGGGCTGCAGTGA...AACGCAGGGCCTCTTTGCGCTCGGAAACGACGTACAACCCAGACTTCCAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp CTCAGACAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCTCAGCATTTCCTCACTaGAGCCCAGATGCACAGACA +
Preference number: 4 (lower is better)
Translates to: LRQNQEALSLMKGQGSAASAFPH*SPDAQT
Trigger: TGTCTGTGCATCTGGGCTGCAGTGAGGAAATGCTGA...GGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTGTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp CGCAAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTCTGCAGCCAGCAGATTaGCTGGCCTATATTCCTCTC +
Preference number: 4 (lower is better)
Translates to: RKEALRSGFRGFRGFSSCLQPAD*LAYIPL
Trigger: GAGAGGAATATAGGCCAGGCAATCTGCTGGCTGCAG...ACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp GGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAACTTGGAGAGGCACTaGTCCAATGAGACAGCTACA +
Preference number: 4 (lower is better)
Translates to: GRVHTRRERELAEKQHPGNLERH*SNETAT
Trigger: TGTAGCTGTCTCATTGGAGCAGTGCCTCTCCAAGTT...CCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540306.5
ENST00000587574.1
CDS-3UTR GCA 90 bp GGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGGAGATGATGGCCCTCTaGCCTCTGAACTGTTCATTA +
Preference number: 4 (lower is better)
Translates to: GRVHTRRERELAEKQHPGEMMAL*PLNCSL
Trigger: TAATGAACAGTTCAGAGGGCAGAGGGCCATCATCTC...CCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540306.5
ENST00000587574.1
CDS-3UTR GCA 90 bp AGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGACCACAGGGAGGAAGTaGTTTGGGCTGCAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: RELAEKQHPGKERSPQAETTGRK*FGLQER
Trigger: TCTCTCCTGCAGCCCAAAGCACTTCCTCCCTGTGGT...CTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587574.1
CDS-3UTR CCA 90 bp CCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTACTGTCTCTCCCCAGAAGGCAGTGGAAGGCTTCGCTaGAGGCCGCATGGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: PFPLWFHLRSLYCLSPEGSGRLR*RPHGLY
Trigger: ATACAAACCATGCGGCCTCCAGCGAAGCCTTCCACT...GCCTTCTGGGGAGAGACAGTACAGGGACCTCAAATGAAACCAAAGGGGAAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp CTCTTTGCTTCTCCTGGCCTGCTGCGCTGGGCATTAAAGCTTCCAGTTCTTTCATCTCTTTGCTTCTCCTaGCCTGCTGCGCTGGGCATT +
Preference number: 4 (lower is better)
Translates to: LFASPGLLRWALKLPVLSSLCFS*PAALGI
Trigger: AATGCCCAGCGCAGCAGGCCAGGAGAAGCAAAGAGA...TGAAAGAACTGGAAGCTTTAATGCCCAGCGCAGCAGGCCAGGAGAAGCAAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592258.5
CDS-3UTR CCA 90 bp GCAAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGAAATGTCACCAATGGTaGGCTCTTCTGGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: AKRPCVLVSGDSGDSHHVKCHQW*ALLEEG
Trigger: GCCCTCCTCCAGAAGAGCCCACCATTGGTGACATTT...CACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp GGAGGTGGGTGCCCAGTCCCCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTATTGAGGTCTCCTCATTaGTCTCCCCGACAAGATTTC +
Preference number: 4 (lower is better)
Translates to: GGGCPVPVSPLVSFEVPVLRSPH*SPRQDF
Trigger: GAAATCTTGTCGGGGAGACCAATGAGGAGACCTCAA...TACAGGGACCTCAAATGAAACCAAAGGGGAAACGGGGACTGGGCACCCACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp GGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGTTGAGGTCTCCTCATTaGTCTCCCCGACAAGATTTC +
Preference number: 4 (lower is better)
Translates to: GRVHTRRERELAEKQHPGLRSPH*SPRQDF
Trigger: GAAATCTTGTCGGGGAGACCAATGAGGAGACCTCAA...CCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp GCCCTGCAGCACAGATACTGGCAGCACAAACCAGCTGAGAGGAGAGGTGTTATGCAAGGGACAAGTGAGTaGGTCTATCAGGATTCCGCA +
Preference number: 4 (lower is better)
Translates to: ALQHRYWQHKPAERRGVMQGTSE*VYQDSA
Trigger: TGCGGAATCCTGATAGACCCACTCACTTGTCCCTTG...CATAACACCTCTCCTCTCAGCTGGTTTGTGCTGCCAGTATCTGTGCTGCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp ATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGTGCCCTCTCAGGAATaGAGGCTCTTCCTCAACCAA +
Preference number: 4 (lower is better)
Translates to: IGGNPEGRVHTRRERELAVPSQE*RLFLNQ
Trigger: TTGGTTGAGGAAGAGCCTCCATTCCTGAGAGGGCAC...AGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp GAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCGTTCCCGCCTTTCTTTaGCCAAGGCACTCTGCATCA +
Preference number: 4 (lower is better)
Translates to: EKQHPGKERSPQAEMMALVPAFL*PRHSAS
Trigger: TGATGCAGAGTGCCTTGGCCAAAGAAAGGCGGGAAC...GAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp GAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATCTCAGCTTCCCGCTaGGCCTGTTTGAGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: ELAEKQHPGKERSPQAEMISASR*ACLSSR
Trigger: GCGGGAACTCAAACAGGCCCAGCGGGAAGCTGAGAT...CATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp AGTAGAGGTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCCAATACCCCTCATGTTaGCAGCAATCTGTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: SRGPMSLHKMLTHSTFPSQYPSC*QQSVCL
Trigger: AAGGCAGACAGATTGCTGCCAACATGAGGGGTATTG...GGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGACCTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp GTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTACTCAGGAATATCATTaGGCATCATCCCAATACCCC +
Preference number: 4 (lower is better)
Translates to: VPCPCTRCSPTPPSHPGATQEYH*ASSQYP
Trigger: GGGGTATTGGGATGATGCCCAATGATATTCCTGAGT...AGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp GAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGGCCACTCTTCTGGGCTaGGTACACCCAATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: ELAEKQHPGKERSPQAEMATLLG*VHPILP
Trigger: GGGCAAGATTGGGTGTACCCAGCCCAGAAGAGTGGC...CATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp AAGGCTGGAAGTCTGGGTTGTACGTCGTTTCCGAGCGCAAAGAGGCCCTGCGTTTGGATATGTTCGACCTaGGATGGTGAAAATGGGAGC +
Preference number: 4 (lower is better)
Translates to: KAGSLGCTSFPSAKRPCVWICST*DGENGS
Trigger: GCTCCCATTTTCACCATCCCAGGTCGAACATATCCA...AACGCAGGGCCTCTTTGCGCTCGGAAACGACGTACAACCCAGACTTCCAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp GAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCGGGTCTGCATCTCACTaGGAAGAGCAGAGTACACTG +
Preference number: 4 (lower is better)
Translates to: EKQHPGKERSPQAEMMALGSASH*EEQSTL
Trigger: CAGTGTACTCTGCTCTTCCCAGTGAGATGCAGACCC...GAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTAACCTTTCTGCTGCCTaGTGGAGCTGGGTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: SRDSCILRTSLSSISPSPNLSAA*WSWVKD
Trigger: ATCTTTGACCCAGCTCCACCAGGCAGCAGAAAGGTT...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CCA 90 bp GTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTTCTCTGCGATATTGGTaGCAATCACAACCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: VPCPCTRCSPTPPSHPGASLRYW*QSQPFC
Trigger: GCAGAAAGGTTGTGATTGCCACCAATATCGCAGAGA...AGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTTCCCCGTTTCCCCTTTaGTTTCATTTGAGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SRDSCILRTSLSSISPSPSPFPL*FHLRSL
Trigger: CAGGGACCTCAAATGAAACCAAAGGGGAAACGGGGA...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp GCTAGTGGAAGGCTTCGCTGGAGGCCGCATGGTTTGTATGAGACGCAGCAAGTTCTCAGTGCAAACCTTTaGCACCAAAGACAGGTACTC +
Preference number: 4 (lower is better)
Translates to: ASGRLRWRPHGLYETQQVLSANL*HQRQVL
Trigger: GAGTACCTGTCTTTGGTGTCAAAGGTTTGCACTGAG...AACTTGCTGCGTCTCATACAAACCATGCGGCCTCCAGCGAAGCCTTCCACTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592258.5
CDS-3UTR TCA 90 bp CCGAACAGAAGGGTTGTCCGGTTGGCAAAGGACTGGGAAGAGTTCCTTCAGCTTCAAGGTCCTTGTCGTTaGTCCCCAAGTGATTGTCCA +
Preference number: 4 (lower is better)
Translates to: PNRRVVRLAKDWEEFLQLQGPCR*SPSDCP
Trigger: TGGACAATCACTTGGGGATCAACGACAAGGACCTTG...AAGCTGAAGGAACTCTTCCCAGTCCTTTGCCAACCGGACAACCCTTCTGTTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592258.5
CDS-3UTR TCA 90 bp AACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGATCAGGATTCCGCATTaGGGTCTCCTCATTGGTCTC +
Preference number: 4 (lower is better)
Translates to: NPEGRVHTRRERELAEKQIRIPH*GLLIGL
Trigger: GAGACCAATGAGGAGACCTCAATGCGGAATCCTGAT...CTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTCCCGCTGGGCCTGTTTaGGTTCCCGCCTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCPAGPV*VPAFLW
Trigger: CCAAAGAAAGGCGGGAACTCAAACAGGCCCAGCGGG...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR TCA 90 bp AACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGACAACCAAACTCCTCTaGCACTCTTTTGGCCACCGA +
Preference number: 4 (lower is better)
Translates to: NPEGRVHTRRERELAEKQTTKLL*HSFGHR
Trigger: TCGGTGGCCAAAAGAGTGTCAGAGGAGTTTGGTTGT...CTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp GACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGGCTACAAGAGCACATCAGTGTaGATTGTCCTCTCATGTGCC +
Preference number: 4 (lower is better)
Translates to: DSCILRTSLSSISPSPGYKSTSV*IVLSCA
Trigger: GGCACATGAGAGGACAATTCACACTGATGTGCTCTT...GTAGCCAGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR TCA 90 bp GGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTATTCTGGCTGTCTGTTaGAGAGGGCACTGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: GKERSPQAEMMALCPLNCILAVC*RGHWKD
Trigger: ATCCTTCCAGTGCCCTCTTCAACAGACAGCCAGAAT...ACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540306.5
ENST00000587574.1
CDS-3UTR TCA 90 bp GCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCATTCTGGCTGTCTGTTaGAGAGGGCACTGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: AEKQHPGKERSPQAEMMAILAVC*RGHWKD
Trigger: ATCCTTCCAGTGCCCTCTTCAACAGACAGCCAGAAT...GGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540306.5
ENST00000587574.1
CDS-3UTR TCA 90 bp CGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCAAGAGAGGGAGTTAGCTaGGAAGCAGCATCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: RRERELAEKQHPGKERSPREGVS*EAASRE
Trigger: TTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCT...TGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540306.5
ENST00000587574.1
CDS-3UTR GCA 90 bp GTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAATGGCAGCAATCTGTCTaGCTTCCGCATCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: VHTRRERELAEKQHPGKEWQQSV*LPHQAE
Trigger: CTCTGCCTGATGCGGAAGGCAGACAGATTGCTGCCA...TTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp GCAAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGCGTAAGAGGCTTTGTTaGCCCCAAAGGCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: AKRPCVLVSGDSGDSHHVRKRLC*PQRHAS
Trigger: AGAAGCATGCCTTTGGGGGCAACAAAGCCTCTTACG...CACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp ATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTCGTAAGAGGCTTTGTTaGCCCCAAAGGCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: IGGNPEGRVHTRRERELARKRLC*PQRHAS
Trigger: AGAAGCATGCCTTTGGGGGCAACAAAGCCTCTTACG...AGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp CTCAGACAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCTCAAAGATTCGGGTCTaGATCTCACTGGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: LRQNQEALSLMKGQGSAASKIRV*ISLGRA
Trigger: TGCTCTTCCCAGTGAGATGCAGACCCGAATCTTTGA...GGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTGTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp GGTGTAAAAATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGTCACAACCTTTCTGCTaGCTGGTGGAGCTGGGTCAA +
Preference number: 4 (lower is better)
Translates to: GVKIGGNPEGRVHTRRERSQPFC*LVELGQ
Trigger: TTGACCCAGCTCCACCAGGCAGCAGAAAGGTTGTGA...CCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGATTTTTACACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp GAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGCTGTTCTCCCAGCTCTaGCAGCTCGTTGCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: ELAEKQHPGKERSPQAEMLFSQL*QLVALP
Trigger: AGGCAAAGCAACGAGCTGGCAGAGCTGGGAGAACAG...CATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp GAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCATCAGCATTTCCTCACTaGAGCCCAGATGCACAGACA +
Preference number: 4 (lower is better)
Translates to: EGRVHTRRERELAEKQHPSAFPH*SPDAQT
Trigger: TGTCTGTGCATCTGGGCTGCAGTGAGGAAATGCTGA...TGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp AGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACCTGTGCCTAACATCTGCTTaGGAATGTCCTGGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: SFSTSTTSRPAFRKFRNLCLTSA*ECPGPG
Trigger: GCCGGGCCCAGGACATTCGCAAGCAGATGTTAGGCA...CAGGTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp ATTCTAATAGCAAGTGTTCCTCCCTCTTCCATCCCGCTTGAATACCTCTGCCTCTGCCTAACATCTGCTTaGGAATGTCCTGGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: ILIASVPPSSIPLEYLCLCLTSA*ECPGPG
Trigger: GCCGGGCCCAGGACATTCGCAAGCAGATGTTAGGCA...GAGGCAGAGGTATTCAAGCGGGATGGAAGAGGGAGGAACACTTGCTATTAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR GCA 90 bp CGCAAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTCTCGGACTGTGGACTTaGCACAGGAAACAACATCCA +
Preference number: 4 (lower is better)
Translates to: RKEALRSGFRGFRGFSSCLGLWT*HRKQHP
Trigger: TGGATGTTGTTTCCTGTGGCAAGTCCACAGTCCGAG...ACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp GGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTCTCGGACTGTGGACTTaGCACAGGAAACAACATCCA +
Preference number: 4 (lower is better)
Translates to: GKERSPQAEMMALCPLNCLGLWT*HRKQHP
Trigger: TGGATGTTGTTTCCTGTGGCAAGTCCACAGTCCGAG...ACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp CCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTACTGTCTCTCCCCAGAAGGCGCAAAGGAACAATCTTaGCTTTCAGCGCCGTCGGAA +
Preference number: 4 (lower is better)
Translates to: PFPLWFHLRSLYCLSPEGAKEQS*LSAPSE
Trigger: TTCCGACGGCGCTGAAAGGCAAGATTGTTCCTTTGC...GCCTTCTGGGGAGAGACAGTACAGGGACCTCAAATGAAACCAAAGGGGAAACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp AAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGTGCACACAACAATGCCCTaGCCCTTGATTACTGGCCTG +
Preference number: 4 (lower is better)
Translates to: KEALRSGFRGFRGFSSCVHTTMP*PLITGL
Trigger: CAGGCCAGTAATCAAGGGGCAGGGCATTGTTGTGTG...CACACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGGAGTCTGGTGTGACTaGAGCGTAGGATCCACGGGC +
Preference number: 4 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCGVWCD*SVGSTG
Trigger: GCCCGTGGATCCTACGCTGCAGTCACACCAGACTCC...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp GAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGACAGGTACTCGAGTTTaGCAAGTTCTTCCGCGGGGC +
Preference number: 4 (lower is better)
Translates to: ELAEKQHPGKERSPQAEMTGTRV*QVLPRG
Trigger: GCCCCGCGGAAGAACTTGCCAAACTCGAGTACCTGT...CATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp ACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGCTCAGGTACCAGACATCTCTTTGCTTCTCCTaGCCTGCTGCGCTGGGCATT +
Preference number: 4 (lower is better)
Translates to: TQGGNLFSDFSLQLRYQTSLCFS*PAALGI
Trigger: AATGCCCAGCGCAGCAGGCCAGGAGAAGCAAAGAGA...TGTCTGGTACCTGAGCTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp GTGATGAGCAGTTTGTTCCTGATTTCCATTCAGAAAACCGTGAGTAGAGGTCCCGGTCCTTCCGGTCTTTaGGGGGACTCTGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: VMSSLFLISIQKTVSRGPGPSGL*GDSDSC
Trigger: GCAGGAGTCAGAGTCCCCCCAAAGACCGGAAGGACC...GGGACCTCTACTCACGGTTTTCTGAATGGAAATCAGGAACAAACTGCTCATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp CGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCAAAATGTCACCAATGGTaGGCTCTTCTGGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: RRERELAEKQHPGKERSPKCHQW*ALLEEG
Trigger: GCCCTCCTCCAGAAGAGCCCACCATTGGTGACATTT...TGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp GACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGGCTACTTGAGGTCTCCTCATTaGTCTCCCCGACAAGATTTC +
Preference number: 4 (lower is better)
Translates to: DSCILRTSLSSISPSPGYLRSPH*SPRQDF
Trigger: GAAATCTTGTCGGGGAGACCAATGAGGAGACCTCAA...GTAGCCAGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CCA 90 bp GAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCCAAGGGACAAGTGAGTaGGTCTATCAGGATTCCGCA +
Preference number: 4 (lower is better)
Translates to: EKQHPGKERSPQAEMMALQGTSE*VYQDSA
Trigger: TGCGGAATCCTGATAGACCCACTCACTTGTCCCTTG...GAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp GGTGTAAAAATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGATCTCCCACTTCTCTaGGTCAGAGATTCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: GVKIGGNPEGRVHTRRERDLPLL*VRDSGE
Trigger: CTCACCCGAATCTCTGACCCAGAGAAGTGGGAGATC...CCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGATTTTTACACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp GAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCATTGTCATGGACGGCCTaGACCAATTGCTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: EGRVHTRRERELAEKQHPLSWTA*TNCSFS
Trigger: ACTGAAGGAGCAATTGGTCCAGGCCGTCCATGACAA...TGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp GACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGGCTACTGGATATGTTCGACCTaGGATGGTGAAAATGGGAGC +
Preference number: 4 (lower is better)
Translates to: DSCILRTSLSSISPSPGYWICST*DGENGS
Trigger: GCTCCCATTTTCACCATCCCAGGTCGAACATATCCA...GTAGCCAGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CCA 90 bp GGAGGTGGGTGCCCAGTCCCCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTACTGTTTCACGAATCCTaGGTCCACCACATAGTAGAT +
Preference number: 4 (lower is better)
Translates to: GGGCPVPVSPLVSFEVPVLFHES*VHHIVD
Trigger: ATCTACTATGTGGTGGACCCAGGATTCGTGAAACAG...TACAGGGACCTCAAATGAAACCAAAGGGGAAACGGGGACTGGGCACCCACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp GGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGCTGTTTCACGAATCCTaGGTCCACCACATAGTAGAT +
Preference number: 4 (lower is better)
Translates to: GRVHTRRERELAEKQHPGLFHES*VHHIVD
Trigger: ATCTACTATGTGGTGGACCCAGGATTCGTGAAACAG...CCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp CAGGAGAAGCAGCAACGTAACAGGATGTGCCCAATCTCTCAGAAGCTTCTCTACGGCGTCACCACGAGCTaGTCAATCCCTGTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: QEKQQRNRMCPISQKLLYGVTTS*SIPVLE
Trigger: TTCCAAGACAGGGATTGACCAGCTCGTGGTGACGCC...GTAGAGAAGCTTCTGAGAGATTGGGCACATCCTGTTACGTTGCTGCTTCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTCTGTGCTTGCTAAGTTaGTTCTCTGGATTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: SRDSCILRTSLSSISPSPLCLLS*FSGFPA
Trigger: TGCCGGAAATCCAGAGAACCAACTTAGCAAGCACAG...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CCA 90 bp AGTAGAGGTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCCATAGCACCATGGGTTaGAGAACTTGTTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SRGPMSLHKMLTHSTFPSHSTMG*RTCCSS
Trigger: GGAAGAACAACAAGTTCTCCAACCCATGGTGCTATG...GGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGACCTCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp GTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGAACCCACTGCAGATaGCCTTCTGCACTCGGACTG +
Preference number: 4 (lower is better)
Translates to: VHTRRERELAEKQHPGKERTHCR*PSALGL
Trigger: CAGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCT...TTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp CAGGAGAAGCAGCAACGTAACAGGATGTGCCCAATCTCTCAGAAGCTTCTCTACGTGAGCACCAGCTCATaGTACACCACCCATTCTGGC +
Preference number: 4 (lower is better)
Translates to: QEKQQRNRMCPISQKLLYVSTSS*YTTHSG
Trigger: GCCAGAATGGGTGGTGTACCATGAGCTGGTGCTCAC...GTAGAGAAGCTTCTGAGAGATTGGGCACATCCTGTTACGTTGCTGCTTCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp ACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGCTCAGGTACCAGACAGTGAGCACCAGCTCATaGTACACCACCCATTCTGGC +
Preference number: 4 (lower is better)
Translates to: TQGGNLFSDFSLQLRYQTVSTSS*YTTHSG
Trigger: GCCAGAATGGGTGGTGTACCATGAGCTGGTGCTCAC...TGTCTGGTACCTGAGCTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp AGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACCTGAGAGGCCCTGCGTTCTaGTTTCAGGGGATTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SFSTSTTSRPAFRKFRNLRGPAF*FQGIQG
Trigger: CCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCT...CAGGTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp AACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGAGGGAGGAAGTGCTTTaGGCATTCTGGCTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: NPEGRVHTRRERELAEKQREEVL*AFWLSV
Trigger: AACAGACAGCCAGAATGCCCAAAGCACTTCCTCCCT...CTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp AAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTTCAAGGGACGGTCCATTCTaGCTGTCTGTTGAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: KERSPQAEMMALCPLNCSRDGPF*LSVEEG
Trigger: GCCCTCTTCAACAGACAGCCAGAATGGACCGTCCCT...TGAACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587574.1
CDS-3UTR CCA 90 bp CCCCAAATAGCCTTGATTGTAATTCTAATAGCAAGTGTTCCTCCCTCTTCCATCCCGTGGCTGGGTCCGTaGCTGGGTCTGATGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PQIALIVILIASVPPSSIPWLGP*LGLMGK
Trigger: CTTCCCCATCAGACCCAGCCACGGACCCAGCCACGG...GATGGAAGAGGGAGGAACACTTGCTATTAGAATTACAATCAAGGCTATTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR TCA 90 bp AACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCTCAGTGCAAACCTTTaGCACCAAAGACAGGTACTC +
Preference number: 4 (lower is better)
Translates to: NPEGRVHTRRERELAEKQLSANL*HQRQVL
Trigger: GAGTACCTGTCTTTGGTGTCAAAGGTTTGCACTGAG...CTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp CGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGGTCCTTGTCGTTaGTCCCCAAGTGATTGTCCA +
Preference number: 4 (lower is better)
Translates to: RRERELAEKQHPGKERSPQGPCR*SPSDCP
Trigger: TGGACAATCACTTGGGGATCAACGACAAGGACCTTG...TGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp GAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCATCTTCTCCAGTCTCTTaGTCCACATCCTTCATGCTC +
Preference number: 4 (lower is better)
Translates to: EGRVHTRRERELAEKQHPSSPVS*STSFML
Trigger: GAGCATGAAGGATGTGGATCAAGAGACTGGAGAAGA...TGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp GGTGTAAAAATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGCTGACAAGGGACAAGTaGGTGGGTCTATCAGGATTC +
Preference number: 4 (lower is better)
Translates to: GVKIGGNPEGRVHTRRERLTRDK*VGLSGF
Trigger: GAATCCTGATAGACCCACTCACTTGTCCCTTGTCAG...CCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGATTTTTACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp GTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAACTACTTCAGGAGCACTaGCAAGGGACAAGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: VHTRRERELAEKQHPGKELLQEH*QGTSEW
Trigger: CCACTCACTTGTCCCTTGTCAGTGCTCCTGAAGTAG...TTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp TCTTTAGGGTGTGGTTTGCTGCCCAGTGACAACATACATTCCTTTATATCCTGGGGTCAGAGATTCGGGTaGGGCGCTTGCGTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: SLGCGLLPSDNIHSFISWGQRFG*GACVPV
Trigger: CACTGGAACGCAAGCGCCTCACCCGAATCTCTGACC...CCAGGATATAAAGGAATGTATGTTGTCACTGGGCAGCAAACCACACCCTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp GCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCAGCAATCATCTGTTTaGTCTCCCACTTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: AEKQHPGKERSPQAEMMAQQSSV*SPTSLG
Trigger: ACCCAGAGAAGTGGGAGATCAAACAGATGATTGCTG...GGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp AACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGAAGAGCACATCAGTGTaGATTGTCCTCTCATGTGCC +
Preference number: 4 (lower is better)
Translates to: NPEGRVHTRRERELAEKQKSTSV*IVLSCA
Trigger: GGCACATGAGAGGACAATTCACACTGATGTGCTCTT...CTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp CTCCTGCTAGCTGGGGCATCAGGGCACTCACCATGTCCCTGCACAAGATGCTCAATGTCCTGCCGTTTCTaGACTGTCTTTTTCAACAAT +
Preference number: 4 (lower is better)
Translates to: LLLAGASGHSPCPCTRCSMSCRF*TVFFNN
Trigger: ATTGTTGAAAAAGACAGTTCAGAAACGGCAGGACAT...TGAGCATCTTGTGCAGGGACATGGTGAGTGCCCTGATGCCCCAGCTAGCAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp AGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGTGCATCCAAGGTGGCTaGGGTGACAATCAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: RELAEKQHPGKERSPQAECIQGG*GDNQLH
Trigger: ATGAAGCTGATTGTCACCTCAGCCACCTTGGATGCA...CTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp GAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCATTCGACCTGGGATGGTaGAAATGGGAGCTTCATAGA +
Preference number: 4 (lower is better)
Translates to: EGRVHTRRERELAEKQHPFDLGW*KWELHR
Trigger: TCTATGAAGCTCCCATTTTCACCATCCCAGGTCGAA...TGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTCAATGCCCTGCCCCTTaGTTACTGGCCTGGGCTTAC +
Preference number: 4 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCQCPAP*LLAWAY
Trigger: GTAAGCCCAGGCCAGTAATCAAGGGGCAGGGCATTG...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp CTAATAGCAAGTGTTCCTCCCTCTTCCATCCCGCTTGAATACCTCTGCCTCCAGCCATTCAGAAAACCGTaGGTAGAGGTCCCATTCTGG +
Preference number: 4 (lower is better)
Translates to: LIASVPPSSIPLEYLCLQPFRKP*VEVPFW
Trigger: CCAGAATGGGACCTCTACTCACGGTTTTCTGAATGG...CTGGAGGCAGAGGTATTCAAGCGGGATGGAAGAGGGAGGAACACTTGCTATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR GCA 90 bp GAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGGCCATGGCTATAGCTTaGCCAGAACCTCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: ELAEKQHPGKERSPQAEMAMAIA*PEPPSS
Trigger: TGAGGAAGGAGGTTCTGGGCAAGCTATAGCCATGGC...CATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp AAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGTGATGCTTTGCTTAGTGTaGCCTCTCAGGAATGGAGGC +
Preference number: 4 (lower is better)
Translates to: KEALRSGFRGFRGFSSCVMLCLV*PLRNGG
Trigger: GCCTCCATTCCTGAGAGGGCACACTAAGCAAAGCAT...CACACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp AGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGCTTTGCTTAGTGTaGCCTCTCAGGAATGGAGGC +
Preference number: 4 (lower is better)
Translates to: RELAEKQHPGKERSPQAEMLCLV*PLRNGG
Trigger: GCCTCCATTCCTGAGAGGGCACACTAAGCAAAGCAT...CTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp CGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACTCATGTCCATGCTTTaGTTAGTGTGCCCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: RRERELAEKQHPGKERSPLMSML*LVCPLR
Trigger: CCTGAGAGGGCACACTAAGCAAAGCATGGACATGAG...TGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp AGAAGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACGGCACTCTGCATCATTaGTGCTTGGGAGAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: RSFSTSTTSRPAFRKFRNGTLHH*CLGEGA
Trigger: GGCTCCCTCTCCCAAGCAGCAATGATGCAGAGTGCC...GTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp CCAGCTTTCCGTAAGTTCCGAAACCTGGCCTGGCAAGACCTGCCTGATGTTCCGAATTGTCCTCTCATGTaGCTCGTCCAACATGATGAT +
Preference number: 4 (lower is better)
Translates to: PAFRKFRNLAWQDLPDVPNCPLM*LVQHDD
Trigger: ATCATCATGTTGGACGAGGCACATGAGAGGACAATT...CGGAACATCAGGCAGGTCTTGCCAGGCCAGGTTTCGGAACTTACGGAAAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp ATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTTCAAAGATTCGGGTCTaGATCTCACTGGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: IGGNPEGRVHTRRERELASKIRV*ISLGRA
Trigger: TGCTCTTCCCAGTGAGATGCAGACCCGAATCTTTGA...AGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp AAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTTCACAATCACAACCTTTCTaGTGCCTGGTGGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: KERSPQAEMMALCPLNCSQSQPF*CLVELG
Trigger: ACCCAGCTCCACCAGGCAGCAGAAAGGTTGTGATTG...TGAACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp ATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTTCACTGCAGCCCAGATaGACAGACATGATGAGCATT +
Preference number: 4 (lower is better)
Translates to: IGGNPEGRVHTRRERELASLQPR*TDMMSI
Trigger: AATGCTCATCATGTCTGTGCATCTGGGCTGCAGTGA...AGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp GGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTATTATGCCTAACATCTaGTTGCGAATGTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GKERSPQAEMMALCPLNCIMPNI*LRMSWA
Trigger: GGCCCAGGACATTCGCAAGCAGATGTTAGGCATAAT...ACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp GACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGGCTACGGTTCAAGACGCTGTTaGTTCTTCTGTTTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: DSCILRTSLSSISPSPGYGSRRC*FFCLLS
Trigger: GCTAAGCAAACAGAAGAAGCAACAGCGTCTTGAACC...GTAGCCAGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp GTAACAGCTAAGCAGAGAGGAGTCAGGAAGCACGGAGAAGACTCTTGGGGCTGGTTCCCATCCTGGAGCTaGACAAATTGTCCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: VTAKQRGVRKHGEDSWGWFPSWS*TNCPFL
Trigger: AAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAA...CCAGCCCCAAGAGTCTTCTCCGTGCTTCCTGACTCCTCTCTGCTTAGCTGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR GCA 90 bp GAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAAACTTGGAGAGGCACTaGTCCAATGAGACAGCTACA +
Preference number: 4 (lower is better)
Translates to: EGRVHTRRERELAEKQHPNLERH*SNETAT
Trigger: TGTAGCTGTCTCATTGGAGCAGTGCCTCTCCAAGTT...TGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540306.5
ENST00000587574.1
CDS-3UTR CCA 90 bp AGAAGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACTGCATCATTGCTGCTTaGGAGAGGGAGCCGTCTGGG +
Preference number: 4 (lower is better)
Translates to: RSFSTSTTSRPAFRKFRNCIIAA*EREPSG
Trigger: CCCAGACGGCTCCCTCTCCCAAGCAGCAATGATGCA...GTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp CCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTACTGTCTCTCCCCAGAAGGCCAATACCCCTCATGTTaGCAGCAATCTGTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: PFPLWFHLRSLYCLSPEGQYPSC*QQSVCL
Trigger: AAGGCAGACAGATTGCTGCCAACATGAGGGGTATTG...GCCTTCTGGGGAGAGACAGTACAGGGACCTCAAATGAAACCAAAGGGGAAACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp GAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGCCTTCAGTTTGTAGATaGGCAGGCTCTCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ELAEKQHPGKERSPQAEMPSVCR*AGSPSA
Trigger: AGCAGAGGGAGAGCCTGCCCATCTACAAACTGAAGG...CATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp GAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGGCCTCCGCCAGGTACTaGGTGATCTGTGTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: ELAEKQHPGKERSPQAEMASARY*VICVVF
Trigger: AAAGACAACACAGATCACCCAGTACCTGGCGGAGGC...CATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp GGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTTGGATATGTTCGACCTaGGATGGTGAAAATGGGAGC +
Preference number: 4 (lower is better)
Translates to: GKERSPQAEMMALCPLNCWICST*DGENGS
Trigger: GCTCCCATTTTCACCATCCCAGGTCGAACATATCCA...ACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp CGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCAAACCTTTCTGCTGCCTaGTGGAGCTGGGTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: RRERELAEKQHPGKERSPNLSAA*WSWVKD
Trigger: ATCTTTGACCCAGCTCCACCAGGCAGCAGAAAGGTT...TGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp CTCAGACAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCTCTCTGCGATATTGGTaGCAATCACAACCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LRQNQEALSLMKGQGSAASLRYW*QSQPFC
Trigger: GCAGAAAGGTTGTGATTGCCACCAATATCGCAGAGA...GGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTGTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp GGTGTAAAAATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGGATTTCCGGCACGTTaGTGGTCAGCATTTCATCTC +
Preference number: 4 (lower is better)
Translates to: GVKIGGNPEGRVHTRRERGFPAR*WSAFHL
Trigger: GAGATGAAATGCTGACCACCAACGTGCCGGAAATCC...CCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGATTTTTACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp GAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCCTGTGCTTGCTAAGTTaGTTCTCTGGATTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: EKQHPGKERSPQAEMMALLCLLS*FSGFPA
Trigger: TGCCGGAAATCCAGAGAACCAACTTAGCAAGCACAG...GAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTACAGCATGGATACAATaGTCAGCATTTCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: SRDSCILRTSLSSISPSPTAWIQ*SAFPHC
Trigger: GCAGTGAGGAAATGCTGACCATTGTATCCATGCTGT...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CCA 90 bp GTAACAGCTAAGCAGAGAGGAGTCAGGAAGCACGGAGAAGACTCTTGGGGCTGGGGGCTTGTTTATCCTTaGGCCTATAGAAGACGTTCT +
Preference number: 4 (lower is better)
Translates to: VTAKQRGVRKHGEDSWGWGLVYP*AYRRRS
Trigger: AGAACGTCTTCTATAGGCCCAAGGATAAACAAGCCC...CCAGCCCCAAGAGTCTTCTCCGTGCTTCCTGACTCCTCTCTGCTTAGCTGTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp GCCCTGCAGCACAGATACTGGCAGCACAAACCAGCTGAGAGGAGAGGTGTTATGCATAGCACCATGGGTTaGAGAACTTGTTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ALQHRYWQHKPAERRGVMHSTMG*RTCCSS
Trigger: GGAAGAACAACAAGTTCTCCAACCCATGGTGCTATG...CATAACACCTCTCCTCTCAGCTGGTTTGTGCTGCCAGTATCTGTGCTGCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTATATTCTCCAGGCATTaGGTTCCTCATAGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: SRDSCILRTSLSSISPSPIFSRH*VPHSGC
Trigger: ACAACCGCTATGAGGAACCCAATGCCTGGAGAATAT...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CCA 90 bp CAGGAGAAGCAGCAACGTAACAGGATGTGCCCAATCTCTCAGAAGCTTCTCTACGAGGGCACAAGGAGGTaGCTATTCTCCAAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: QEKQQRNRMCPISQKLLYEGTRR*LFSKQV
Trigger: CACTTGCTTGGAGAATAGCCACCTCCTTGTGCCCTC...GTAGAGAAGCTTCTGAGAGATTGGGCACATCCTGTTACGTTGCTGCTTCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp TCTTTAGGGTGTGGTTTGCTGCCCAGTGACAACATACATTCCTTTATATCCTGGACGAGATTGGGGAGGTaGGTGCCCAGTCCCCGTTTC +
Preference number: 4 (lower is better)
Translates to: SLGCGLLPSDNIHSFISWTRLGR*VPSPRF
Trigger: GAAACGGGGACTGGGCACCCACCTCCCCAATCTCGT...CCAGGATATAAAGGAATGTATGTTGTCACTGGGCAGCAAACCACACCCTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp GTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAGTGCTTTGGGCATTCTaGCTGTCTGTTGAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: VHTRRERELAEKQHPGKEVLWAF*LSVEEG
Trigger: GCCCTCTTCAACAGACAGCCAGAATGCCCAAAGCAC...TTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp GTGGCTGGGTCTGATGGGGAAGTGGTGTGTTCAGGAGGTTTCCTGGTTGGATTCAGGAGGTTTCCTGGTTaGATTCTTCAGTGCGTTTTG +
Preference number: 4 (lower is better)
Translates to: VAGSDGEVVCSGGFLVGFRRFPG*ILQCVL
Trigger: CAAAACGCACTGAAGAATCCAACCAGGAAACCTCCT...GAATCCAACCAGGAAACCTCCTGAACACACCACTTCCCCATCAGACCCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR CCA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTCACGGAGAAGACTCTTaGGGCTGGCTCAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCHGEDS*GWLRGR
Trigger: TCTGCCTCTGAGCCAGCCCCAAGAGTCTTCTCCGTG...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTTATTCCCTATTTCCCTaGGTCTTCATCTCCCATGTC +
Preference number: 4 (lower is better)
Translates to: SRDSCILRTSLSSISPSPYSLFP*VFISHV
Trigger: GACATGGGAGATGAAGACCCAGGGAAATAGGGAATA...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
3UTR CAA 72 bp GGCACAGAGAGCCCAGGGCTCCCTCCCCAAATAGCCTaGATTGTAATTCTAATAGCAAGTGTTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GTESPGLPPQIA*IVILIASVPPS
Trigger: AGAGGGAGGAACACTTGCTATTAGAATTACAATCAAGGCTATTTGGGGAGGGAGCCCTGGGCTCTCTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR TCA 90 bp AGTAGAGGTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTTTTCTCAGCAAGACTaGTCACAAATTCAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: SRGPMSLHKMLTHSTFPSFSQQD*SQIQQG
Trigger: ACCTTGCTGAATTTGTGATCAGTCTTGCTGAGAAAA...GGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGACCTCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR TCA 90 bp AAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTTCAATGACAATCAGGATCTaGTTGTCATGGACGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KERSPQAEMMALCPLNCSMTIRI*LSWTAW
Trigger: CCAGGCCGTCCATGACAATCAGATCCTGATTGTCAT...TGAACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp GTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAATGATGATCGCGTACTaGGTGAGGTCAGGGTCAATC +
Preference number: 4 (lower is better)
Translates to: VHTRRERELAEKQHPGKEMMIAY*VRSGSI
Trigger: GATTGACCCTGACCTCACTCAGTACGCGATCATCAT...TTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp GTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTGGTGGTTCTGTTAAATaGATCTGCATAACAGTAATC +
Preference number: 4 (lower is better)
Translates to: VPCPCTRCSPTPPSHPGAGGSVK*ICITVI
Trigger: GATTACTGTTATGCAGATTCATTTAACAGAACCACC...AGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR TCA 90 bp CGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCAGTATCAATTTCTTCCTaGCCAGTCAGGAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: RRERELAEKQHPGKERSPVSISS*PVRKTR
Trigger: CCTGGTCTTCCTGACTGGTCAGGAAGAAATTGATAC...TGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp CCCTCCCCAAATAGCCTTGATTGTAATTCTAATAGCAAGTGTTCCTCCCTCTTCACACAGCTAGCAGGGTaGGGTGGTCCCCTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: PSPNSLDCNSNSKCSSLFTQLAG*GGPLQS
Trigger: AGACTGAAGGGGACCACCTCACCCTGCTAGCTGTGT...GAAGAGGGAGGAACACTTGCTATTAGAATTACAATCAAGGCTATTTGGGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR TCA 90 bp AAAGCCAAGCTATCGTGGTGGGAAGAAGGTGTAAAAATCGGTGGAAACCCTGAAGAGGCACTGCTCCAATaGGACAGCTACAGCAACCAC +
Preference number: 4 (lower is better)
Translates to: KAKLSWWEEGVKIGGNPEEALLQ*DSYSNH
Trigger: GTGGTTGCTGTAGCTGTCTCATTGGAGCAGTGCCTC...TTCAGGGTTTCCACCGATTTTTACACCTTCTTCCCACCACGATAGCTTGGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540306.5
ENST00000587574.1
CDS-3UTR GCA 90 bp AGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACCTGTTGGCCAAGGCACTCTaGATCATTGCTGCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SFSTSTTSRPAFRKFRNLLAKAL*IIAAWE
Trigger: CTCCCAAGCAGCAATGATGCAGAGTGCCTTGGCCAA...CAGGTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTCCTGGAAGTGTAGCCTaGCTCCGCCAGGTACTGGGT +
Preference number: 4 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVPGSVA*LRQVLG
Trigger: ACCCAGTACCTGGCGGAGGCAGGCTACACTTCCAGG...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp CGGGCAGCTGGTCCGACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGGTCGAGTTGAGAAAATaGTCAGTTAAGACAGTCAGT +
Preference number: 4 (lower is better)
Translates to: RAAGPTQGGNLFSDFSLQVELRK*SVKTVS
Trigger: ACTGACTGTCTTAACTGAGCATTTTCTCAACTCGAC...CTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGTCGGACCAGCTGCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR GCA 90 bp CGCAAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTTTCCCATCCTGGAGCTaGACAAATTGTCCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: RKEALRSGFRGFRGFSSCFPSWS*TNCPFL
Trigger: AAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAA...ACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp AGAAGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACTGTCCCTGCACAAGATaGTCACCCACTCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: RSFSTSTTSRPAFRKFRNCPCTR*SPTPPS
Trigger: GGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACA...GTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp CAGGAGAAGCAGCAACGTAACAGGATGTGCCCAATCTCTCAGAAGCTTCTCTACACTAAGAACAAGCCCTaGAGCACAGATACTGGCAGC +
Preference number: 4 (lower is better)
Translates to: QEKQQRNRMCPISQKLLYTKNKP*STDTGS
Trigger: GCTGCCAGTATCTGTGCTGCAGGGCTTGTTCTTAGT...GTAGAGAAGCTTCTGAGAGATTGGGCACATCCTGTTACGTTGCTGCTTCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp GGTGTAAAAATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGATGATGGCCCTCTaGCCTCTGAACTGTTCATTA +
Preference number: 4 (lower is better)
Translates to: GVKIGGNPEGRVHTRREREMMAL*PLNCSL
Trigger: TAATGAACAGTTCAGAGGGCAGAGGGCCATCATCTC...CCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGATTTTTACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540306.5
ENST00000587574.1
CDS-3UTR CCA 90 bp GTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTTTTAGGTTTAACAACTaGATCTTTGCTAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: VPCPCTRCSPTPPSHPGAFRFNN*IFASGR
Trigger: CCTTCCACTAGCAAAGATCCAGTTGTTAAACCTAAA...AGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp ACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGCTCAGGTACCAGACACAAGGGACAAGTGAGTaGGTCTATCAGGATTCCGCA +
Preference number: 4 (lower is better)
Translates to: TQGGNLFSDFSLQLRYQTQGTSE*VYQDSA
Trigger: TGCGGAATCCTGATAGACCCACTCACTTGTCCCTTG...TGTCTGGTACCTGAGCTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp GAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGAGAGGGAGCCGTCTaGGTTCTTGACAATTTTAAT +
Preference number: 4 (lower is better)
Translates to: EGRVHTRRERELAEKQHPGEGAV*VLDNFN
Trigger: ATTAAAATTGTCAAGAACCCAGACGGCTCCCTCTCC...TGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp GCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCACTCAGGAATATCATTaGGCATCATCCCAATACCCC +
Preference number: 4 (lower is better)
Translates to: AEKQHPGKERSPQAEMMATQEYH*ASSQYP
Trigger: GGGGTATTGGGATGATGCCCAATGATATTCCTGAGT...GGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp GTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGTCCTCAAATCGAATaGTGTAGCCCACCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: VHTRRERELAEKQHPGKESPQIE*CSPPLG
Trigger: GCCAAGAGGTGGGCTACACCATTCGATTTGAGGACT...TTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp GCCCTGCAGCACAGATACTGGCAGCACAAACCAGCTGAGAGGAGAGGTGTTATGATGTCTCTGCGATATTaGTGGCAATCACAACCTTTC +
Preference number: 4 (lower is better)
Translates to: ALQHRYWQHKPAERRGVMMSLRY*WQSQPF
Trigger: GAAAGGTTGTGATTGCCACCAATATCGCAGAGACAT...CATAACACCTCTCCTCTCAGCTGGTTTGTGCTGCCAGTATCTGTGCTGCAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTATGTCTCTGCGATATTaGTGGCAATCACAACCTTTC +
Preference number: 4 (lower is better)
Translates to: SRDSCILRTSLSSISPSPMSLRY*WQSQPF
Trigger: GAAAGGTTGTGATTGCCACCAATATCGCAGAGACAT...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CCA 90 bp ACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGCTCAGGTACCAGACAGGATTTCCGGCACGTTaGTGGTCAGCATTTCATCTC +
Preference number: 4 (lower is better)
Translates to: TQGGNLFSDFSLQLRYQTGFPAR*WSAFHL
Trigger: GAGATGAAATGCTGACCACCAACGTGCCGGAAATCC...TGTCTGGTACCTGAGCTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp GAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGGCTAAGTTGGTTCTCTaGATTTCCGGCACGTTGGTG +
Preference number: 4 (lower is better)
Translates to: ELAEKQHPGKERSPQAEMAKLVL*ISGTLV
Trigger: CACCAACGTGCCGGAAATCCAGAGAACCAACTTAGC...CATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp CGCAAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGGGCTTGTTTATCCTTaGGCCTATAGAAGACGTTCT +
Preference number: 4 (lower is better)
Translates to: RKEALRSGFRGFRGFSSCGLVYP*AYRRRS
Trigger: AGAACGTCTTCTATAGGCCCAAGGATAAACAAGCCC...ACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp AACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGGGGCTTGTTTATCCTTaGGCCTATAGAAGACGTTCT +
Preference number: 4 (lower is better)
Translates to: NPEGRVHTRRERELAEKQGLVYP*AYRRRS
Trigger: AGAACGTCTTCTATAGGCCCAAGGATAAACAAGCCC...CTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp GAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGTGGTCCCCTTCAGTCTaGTGGAATTTGGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ELAEKQHPGKERSPQAEMWSPSV*WNLAFF
Trigger: GAAGAAGGCCAAATTCCACCAGACTGAAGGGGACCA...CATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp TTGATTGTAATTCTAATAGCAAGTGTTCCTCCCTCTTCCATCCCGCTTGAATACTGCTTGCGAATGTCCTaGGCCCGGCGCAGGGAACGA +
Preference number: 4 (lower is better)
Translates to: LIVILIASVPPSSIPLEYCLRMS*ARRRER
Trigger: TCGTTCCCTGCGCCGGGCCCAGGACATTCGCAAGCA...GTATTCAAGCGGGATGGAAGAGGGAGGAACACTTGCTATTAGAATTACAATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR CCA 90 bp GAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGTCTGCACTCGGACTGTaGACTTGCCACAGGAAACAA +
Preference number: 4 (lower is better)
Translates to: ELAEKQHPGKERSPQAEMSALGL*TCHRKQ
Trigger: TTGTTTCCTGTGGCAAGTCCACAGTCCGAGTGCAGA...CATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp CAGGAGAAGCAGCAACGTAACAGGATGTGCCCAATCTCTCAGAAGCTTCTCTACACAAGGCTGGAAGTCTaGGTTGTACGTCGTTTCCGA +
Preference number: 4 (lower is better)
Translates to: QEKQQRNRMCPISQKLLYTRLEV*VVRRFR
Trigger: TCGGAAACGACGTACAACCCAGACTTCCAGCCTTGT...GTAGAGAAGCTTCTGAGAGATTGGGCACATCCTGTTACGTTGCTGCTTCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp GCCCTGCAGCACAGATACTGGCAGCACAAACCAGCTGAGAGGAGAGGTGTTATGTGTTTCAAAAGGAAATaGGACATGCTGCACATTGCG +
Preference number: 4 (lower is better)
Translates to: ALQHRYWQHKPAERRGVMCFKRK*DMLHIA
Trigger: CGCAATGTGCAGCATGTCCCATTTCCTTTTGAAACA...CATAACACCTCTCCTCTCAGCTGGTTTGTGCTGCCAGTATCTGTGCTGCAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR CAA 72 bp CTGGCCTATATTCCTCTCCCTCGGACTCTTTCTGAATaGTCTTTAGGGTGTGGTTTGCTGCCCAGTGACAAC +
Preference number: 4 (lower is better)
Translates to: LAYIPLPRTLSE*SLGCGLLPSDN
Trigger: GTTGTCACTGGGCAGCAAACCACACCCTAAAGACAATTCAGAAAGAGTCCGAGGGAGAGGAATATAGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
3UTR CAA 72 bp ACATCATCTTCATCCAACATGGTCCGAACAGAAGGGTaGTCCGGTTGGCAAAGGACTGGGAAGAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: TSSSSNMVRTEG*SGWQRTGKSSF
Trigger: GAAGGAACTCTTCCCAGTCCTTTGCCAACCGGACAACCCTTCTGTTCGGACCATGTTGGATGAAGATGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592258.5
CDS-3UTR TCA 90 bp CAGGAGAAGCAGCAACGTAACAGGATGTGCCCAATCTCTCAGAAGCTTCTCTACCAGCAATCATCTGTTTaGTCTCCCACTTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: QEKQQRNRMCPISQKLLYQQSSV*SPTSLG
Trigger: ACCCAGAGAAGTGGGAGATCAAACAGATGATTGCTG...GTAGAGAAGCTTCTGAGAGATTGGGCACATCCTGTTACGTTGCTGCTTCTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTATGTCCTGCCGTTTCTaGACTGTCTTTTTCAACAAT +
Preference number: 4 (lower is better)
Translates to: SRDSCILRTSLSSISPSPMSCRF*TVFFNN
Trigger: ATTGTTGAAAAAGACAGTTCAGAAACGGCAGGACAT...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR TCA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTCCAAGGTGGCTGAGGTaGCAATCAGCTTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCPRWLR*QSASCP
Trigger: AGGACATGAAGCTGATTGTCACCTCAGCCACCTTGG...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR TCA 90 bp GCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCAATTTGGCCTTCTTCTaGTCTGCAAGGGCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: AEKQHPGKERSPQAEMMANLAFF*SARACL
Trigger: TAAACAAGCCCTTGCAGATCAGAAGAAGGCCAAATT...GGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp TTGATTGTAATTCTAATAGCAAGTGTTCCTCCCTCTTCCATCCCGCTTGAATACTCGCTGGTGGGGCTCTaGCTTCTCTCTGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LIVILIASVPPSSIPLEYSLVGL*LLSAAQ
Trigger: CTGAGCTGCAGAGAGAAGTCAGAGCCCCACCAGCGA...GTATTCAAGCGGGATGGAAGAGGGAGGAACACTTGCTATTAGAATTACAATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR GCA 90 bp GTGATGAGCAGTTTGTTCCTGATTTCCATTCAGAAAACCGTGAGTAGAGGTCCCGCCATGGCTATAGCTTaGCCAGAACCTCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: VMSSLFLISIQKTVSRGPAMAIA*PEPPSS
Trigger: TGAGGAAGGAGGTTCTGGGCAAGCTATAGCCATGGC...GGGACCTCTACTCACGGTTTTCTGAATGGAAATCAGGAACAAACTGCTCATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR GCA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGATCCACATCCTTCATaGTCAGGCTGGTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCDPHPS*SGWSWS
Trigger: GGACCAAGACCAGCCTGAGCATGAAGGATGTGGATC...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp AAAGCCAAGCTATCGTGGTGGGAAGAAGGTGTAAAAATCGGTGGAAACCCTGAATTGGCCAAGGCACTCTaGATCATTGCTGCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: KAKLSWWEEGVKIGGNPELAKAL*IIAAWE
Trigger: CTCCCAAGCAGCAATGATGCAGAGTGCCTTGGCCAA...TTCAGGGTTTCCACCGATTTTTACACCTTCTTCCCACCACGATAGCTTGGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp GAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGTTGCCCCCAAAGGCATaGTTCTTCCACTCAGGAATA +
Preference number: 4 (lower is better)
Translates to: ELAEKQHPGKERSPQAEMLPPKA*FFHSGI
Trigger: TATTCCTGAGTGGAAGAAGCATGCCTTTGGGGGCAA...CATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp GGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTAATTGTCCTCTCATGTaGCTCGTCCAACATGATGAT +
Preference number: 4 (lower is better)
Translates to: GKERSPQAEMMALCPLNCNCPLM*LVQHDD
Trigger: ATCATCATGTTGGACGAGGCACATGAGAGGACAATT...ACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp GAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGAGTCAGCGATGTCTCTaGGATATTGGTGGCAATCAC +
Preference number: 4 (lower is better)
Translates to: ELAEKQHPGKERSPQAEMSQRCL*DIGGNH
Trigger: GTGATTGCCACCAATATCGCAGAGACATCGCTGACT...CATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp AGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACCTGCCCAGTGTGTACAGCTaGTCCATGGCTGTGATCAAA +
Preference number: 4 (lower is better)
Translates to: SFSTSTTSRPAFRKFRNLPSVYS*SMAVIK
Trigger: TTTGATCACAGCCATGGAGCAGCTGTACACACTGGG...CAGGTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp AGCTGTGAGGAGGGCACAAGGAGGTGGCTATTCTCCAAGCAAGTGCTAGGAAAAGGCCTTCTTCTGATCTaGAAGGGCTTGTTTATCCTT +
Preference number: 4 (lower is better)
Translates to: SCEEGTRRWLFSKQVLGKGLLLI*KGLFIL
Trigger: AAGGATAAACAAGCCCTTGCAGATCAGAAGAAGGCC...TTTTCCTAGCACTTGCTTGGAGAATAGCCACCTCCTTGTGCCCTCCTCACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp CGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCAGGCCTTCTTCTGATCTaGAAGGGCTTGTTTATCCTT +
Preference number: 4 (lower is better)
Translates to: RRERELAEKQHPGKERSPGLLLI*KGLFIL
Trigger: AAGGATAAACAAGCCCTTGCAGATCAGAAGAAGGCC...TGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp CAGGAGAAGCAGCAACGTAACAGGATGTGCCCAATCTCTCAGAAGCTTCTCTACATTATGCCTAACATCTaGTTGCGAATGTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QEKQQRNRMCPISQKLLYIMPNI*LRMSWA
Trigger: GGCCCAGGACATTCGCAAGCAGATGTTAGGCATAAT...GTAGAGAAGCTTCTGAGAGATTGGGCACATCCTGTTACGTTGCTGCTTCTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp AAAGCCAAGCTATCGTGGTGGGAAGAAGGTGTAAAAATCGGTGGAAACCCTGAATACGGAAGAACCCACTaGAGATGGCCTTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: KAKLSWWEEGVKIGGNPEYGRTH*RWPSAL
Trigger: GAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCCGTA...TTCAGGGTTTCCACCGATTTTTACACCTTCTTCCCACCACGATAGCTTGGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTTACGGAAGAACCCACTaGAGATGGCCTTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCYGRTH*RWPSAL
Trigger: GAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCCGTA...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp CAGACAGTGATGAGCAGTTTGTTCCTGATTTCCATTCAGAAAACCGTGAGTAGATGGGGTGATGGAGGCTaGAGGCTCTTGCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QTVMSSLFLISIQKTVSRWGDGG*RLLPKP
Trigger: TGGCTTTGGCAAGAGCCTGCAGCCTCCATCACCCCA...TCTACTCACGGTTTTCTGAATGGAAATCAGGAACAAACTGCTCATCACTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR GCA 90 bp AAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGTGAAAGGAAATGGGACATaGTGCACATTGCGAATGTGG +
Preference number: 4 (lower is better)
Translates to: KEALRSGFRGFRGFSSCVKGNGT*CTLRMW
Trigger: CCACATTCGCAATGTGCAGCATGTCCCATTTCCTTT...CACACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTTGGCCTGGCAAGACCTaGCTGATGTTCCGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVWPGKT*LMFRQV
Trigger: TACCTGGCGGAACATCAGGCAGGTCTTGCCAGGCCA...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp AGCTGTGAGGAGGGCACAAGGAGGTGGCTATTCTCCAAGCAAGTGCTAGGAAAACAACGTAACAGGATGTaGCCAATCTCTCAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: SCEEGTRRWLFSKQVLGKQRNRM*PISQKL
Trigger: AAGCTTCTGAGAGATTGGGCACATCCTGTTACGTTG...TTTTCCTAGCACTTGCTTGGAGAATAGCCACCTCCTTGTGCCCTCCTCACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp AAAGCCAAGCTATCGTGGTGGGAAGAAGGTGTAAAAATCGGTGGAAACCCTGAAACCACAGGGAGGAAGTaGTTTGGGCATTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: KAKLSWWEEGVKIGGNPETTGRK*FGHSGC
Trigger: ACAGCCAGAATGCCCAAAGCACTTCCTCCCTGTGGT...TTCAGGGTTTCCACCGATTTTTACACCTTCTTCCCACCACGATAGCTTGGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp GTGATGAGCAGTTTGTTCCTGATTTCCATTCAGAAAACCGTGAGTAGAGGTCCCAAATGTCACCAATGGTaGGCTCTTCTGGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: VMSSLFLISIQKTVSRGPKCHQW*ALLEEG
Trigger: GCCCTCCTCCAGAAGAGCCCACCATTGGTGACATTT...GGGACCTCTACTCACGGTTTTCTGAATGGAAATCAGGAACAAACTGCTCATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTGCCCTCTCAGGAATaGAGGCTCTTCCTCAACCAA +
Preference number: 4 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCVPSQE*RLFLNQ
Trigger: TTGGTTGAGGAAGAGCCTCCATTCCTGAGAGGGCAC...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CCA 90 bp AAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTTCACAATACCCCTCATGTTaGCAGCAATCTGTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: KERSPQAEMMALCPLNCSQYPSC*QQSVCL
Trigger: AAGGCAGACAGATTGCTGCCAACATGAGGGGTATTG...TGAACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp AAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGTGACTCAGGAATATCATTaGGCATCATCCCAATACCCC +
Preference number: 4 (lower is better)
Translates to: KEALRSGFRGFRGFSSCVTQEYH*ASSQYP
Trigger: GGGGTATTGGGATGATGCCCAATGATATTCCTGAGT...CACACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp AAAGCCAAGCTATCGTGGTGGGAAGAAGGTGTAAAAATCGGTGGAAACCCTGAACTTTCTGCTGCCTGGTaGAGCTGGGTCAAAGATTCG +
Preference number: 4 (lower is better)
Translates to: KAKLSWWEEGVKIGGNPELSAAW*SWVKDS
Trigger: CGAATCTTTGACCCAGCTCCACCAGGCAGCAGAAAG...TTCAGGGTTTCCACCGATTTTTACACCTTCTTCCCACCACGATAGCTTGGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp GCAAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGGTTCTCATAGCACCATaGGTTGGAGAACTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: AKRPCVLVSGDSGDSHHVVLIAP*VGELVV
Trigger: AACAACAAGTTCTCCAACCCATGGTGCTATGAGAAC...CACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp AGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACCTGTCTGCACTCGGACTGTaGACTTGCCACAGGAAACAA +
Preference number: 4 (lower is better)
Translates to: SFSTSTTSRPAFRKFRNLSALGL*TCHRKQ
Trigger: TTGTTTCCTGTGGCAAGTCCACAGTCCGAGTGCAGA...CAGGTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp AACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGAAAGCCAAGCTATCGTaGTGGGAAGAAGGTGTAAAA +
Preference number: 4 (lower is better)
Translates to: NPEGRVHTRRERELAEKQKAKLS*WEEGVK
Trigger: TTTTACACCTTCTTCCCACCACGATAGCTTGGCTTT...CTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540306.5
ENST00000587574.1
CDS-3UTR CCA 90 bp CCCCAAATAGCCTTGATTGTAATTCTAATAGCAAGTGTTCCTCCCTCTTCCATCCCCCTTCCTGTGTGCTaGGGAGTTAGCTGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: PQIALIVILIASVPPSSIPLPVC*GVSCEL
Trigger: CAGCTCACAGCTAACTCCCCAGCACACAGGAAGGGG...GATGGAAGAGGGAGGAACACTTGCTATTAGAATTACAATCAAGGCTATTTGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR TCA 90 bp ATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTTTTTCTCAGCAAGACTaGTCACAAATTCAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: IGGNPEGRVHTRRERELAFSQQD*SQIQQG
Trigger: ACCTTGCTGAATTTGTGATCAGTCTTGCTGAGAAAA...AGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp CTCTTAGTGTCTGGCATACAGTTCTACAGTAGTTCTAGCATTTACATCACTTCACCCGCTGGGCCTGTTTaGGTTCCCGCCTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LLVSGIQFYSSSSIYITSPAGPV*VPAFLW
Trigger: CCAAAGAAAGGCGGGAACTCAAACAGGCCCAGCGGG...TGAAGTGATGTAAATGCTAGAACTACTGTAGAACTGTATGCCAGACACTAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp AGAAGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACATGACAATCAGGATCTaGTTGTCATGGACGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RSFSTSTTSRPAFRKFRNMTIRI*LSWTAW
Trigger: CCAGGCCGTCCATGACAATCAGATCCTGATTGTCAT...GTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp AGAAGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACATTCTGGCTGTCTGTTaGAGAGGGCACTGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: RSFSTSTTSRPAFRKFRNILAVC*RGHWKD
Trigger: ATCCTTCCAGTGCCCTCTTCAACAGACAGCCAGAAT...GTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp CCCTCTGAACTGTTCATTAACAAGTCACCAGTCCCAGTTCTTTGTTCAAATCCTGAGGCACTGCTCCAATaGGACAGCTACAGCAACCAC +
Preference number: 4 (lower is better)
Translates to: PSELFINKSPVPVLCSNPEALLQ*DSYSNH
Trigger: GTGGTTGCTGTAGCTGTCTCATTGGAGCAGTGCCTC...AGGATTTGAACAAAGAACTGGGACTGGTGACTTGTTAATGAACAGTTCAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587574.1
CDS-3UTR GCA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTTGGCAGCAATCTGTCTaGCTTCCGCATCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVWQQSV*LPHQAE
Trigger: CTCTGCCTGATGCGGAAGGCAGACAGATTGCTGCCA...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTGGCAGGCTCTCCCTCTaGTCAAGGATTGACATCTGG +
Preference number: 4 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVGRLSL*SRIDIW
Trigger: CCAGATGTCAATCCTTGAGCAGAGGGAGAGCCTGCC...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTCTGTTCTCCCAGCTCTaGCAGCTCGTTGCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVLFSQL*QLVALP
Trigger: AGGCAAAGCAACGAGCTGGCAGAGCTGGGAGAACAG...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp AAAGCCAAGCTATCGTGGTGGGAAGAAGGTGTAAAAATCGGTGGAAACCCTGAACCCAGTGTGTACAGCTaGTCCATGGCTGTGATCAAA +
Preference number: 4 (lower is better)
Translates to: KAKLSWWEEGVKIGGNPEPSVYS*SMAVIK
Trigger: TTTGATCACAGCCATGGAGCAGCTGTACACACTGGG...TTCAGGGTTTCCACCGATTTTTACACCTTCTTCCCACCACGATAGCTTGGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTCCCAGTGTGTACAGCTaGTCCATGGCTGTGATCAAA +
Preference number: 4 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCPSVYS*SMAVIK
Trigger: TTTGATCACAGCCATGGAGCAGCTGTACACACTGGG...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTCTGCAGATGGCCTTCTaGACTCGGACTGTGGACTTG +
Preference number: 4 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVLQMAF*TRTVDL
Trigger: CAAGTCCACAGTCCGAGTGCAGAAGGCCATCTGCAG...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp AATAGCCTTGATTGTAATTCTAATAGCAAGTGTTCCTCCCTCTTCCATCCCGCTCTGCAGATGGCCTTCTaGACTCGGACTGTGGACTTG +
Preference number: 4 (lower is better)
Translates to: NSLDCNSNSKCSSLFHPALQMAF*TRTVDL
Trigger: CAAGTCCACAGTCCGAGTGCAGAAGGCCATCTGCAG...AGCGGGATGGAAGAGGGAGGAACACTTGCTATTAGAATTACAATCAAGGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR CCA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTTTGTCATGGACGGCCTaGACCAATTGCTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCLSWTA*TNCSFS
Trigger: ACTGAAGGAGCAATTGGTCCAGGCCGTCCATGACAA...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CCA 90 bp GAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGTCTCTGCGATATTGGTaGCAATCACAACCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: ELAEKQHPGKERSPQAEMSLRYW*QSQPFC
Trigger: GCAGAAAGGTTGTGATTGCCACCAATATCGCAGAGA...CATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp CGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCAATGTCTCTGCGATATTaGTGGCAATCACAACCTTTC +
Preference number: 4 (lower is better)
Translates to: RRERELAEKQHPGKERSPMSLRY*WQSQPF
Trigger: GAAAGGTTGTGATTGCCACCAATATCGCAGAGACAT...TGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp ACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGCTCAGGTACCAGACACTGTTTCACGAATCCTaGGTCCACCACATAGTAGAT +
Preference number: 4 (lower is better)
Translates to: TQGGNLFSDFSLQLRYQTLFHES*VHHIVD
Trigger: ATCTACTATGTGGTGGACCCAGGATTCGTGAAACAG...TGTCTGGTACCTGAGCTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTGGCGTCACCACGAGCTaGTCAATCCCTGTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVGVTTS*SIPVLE
Trigger: TTCCAAGACAGGGATTGACCAGCTCGTGGTGACGCC...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CCA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGCTAAGTTGGTTCTCTaGATTTCCGGCACGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCAKLVL*ISGTLV
Trigger: CACCAACGTGCCGGAAATCCAGAGAACCAACTTAGC...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CCA 90 bp AACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCAAAGTTTCCATAGGTaGGGCATCCATGAAATCAAA +
Preference number: 4 (lower is better)
Translates to: NPEGRVHTRRERELAEKQQSFHR*GIHEIK
Trigger: TTTGATTTCATGGATGCCCCACCTATGGAAACTTTG...CTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTCTGCCCCTTGATTACTaGCCTGGGCTTACAAAGGCG +
Preference number: 4 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVLPLDY*PGLTKA
Trigger: CGCCTTTGTAAGCCCAGGCCAGTAATCAAGGGGCAG...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp AATAGCCTTGATTGTAATTCTAATAGCAAGTGTTCCTCCCTCTTCCATCCCGCTTTCTTCAGTGCGTTTTaGTGGGGCCTGAGGGTGTCG +
Preference number: 4 (lower is better)
Translates to: NSLDCNSNSKCSSLFHPAFFSAF*WGLRVS
Trigger: CGACACCCTCAGGCCCCACCAAAACGCACTGAAGAA...AGCGGGATGGAAGAGGGAGGAACACTTGCTATTAGAATTACAATCAAGGCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR TCA 90 bp AGCTGTGAGGAGGGCACAAGGAGGTGGCTATTCTCCAAGCAAGTGCTAGGAAAATTTTCTCAGCAAGACTaGTCACAAATTCAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: SCEEGTRRWLFSKQVLGKFSQQD*SQIQQG
Trigger: ACCTTGCTGAATTTGTGATCAGTCTTGCTGAGAAAA...TTTTCCTAGCACTTGCTTGGAGAATAGCCACCTCCTTGTGCCCTCCTCACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp AGAAGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACTCTTCTCCAGTCTCTTaGTCCACATCCTTCATGCTC +
Preference number: 4 (lower is better)
Translates to: RSFSTSTTSRPAFRKFRNSSPVS*STSFML
Trigger: GAGCATGAAGGATGTGGATCAAGAGACTGGAGAAGA...GTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp AAACCTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCGGTCAGAGATTCGGGTaGGGCGCTTGCGTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: KPKHKIYTVFPISLGLHLGQRFG*GACVPV
Trigger: CACTGGAACGCAAGCGCCTCACCCGAATCTCTGACC...GAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR TCA 90 bp AAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTTCAATCCTGTCTCACCAATaGCAATCAGGATCTGATTGT +
Preference number: 4 (lower is better)
Translates to: KERSPQAEMMALCPLNCSILSHQ*QSGSDC
Trigger: ACAATCAGATCCTGATTGTCATTGGTGAGACAGGAT...TGAACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp ACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGCTCAGGTACCAGACAATCCTGTCTCACCAATaGCAATCAGGATCTGATTGT +
Preference number: 4 (lower is better)
Translates to: TQGGNLFSDFSLQLRYQTILSHQ*QSGSDC
Trigger: ACAATCAGATCCTGATTGTCATTGGTGAGACAGGAT...TGTCTGGTACCTGAGCTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR TCA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTTTCGACCTGGGATGGTaGAAATGGGAGCTTCATAGA +
Preference number: 4 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCFDLGW*KWELHR
Trigger: TCTATGAAGCTCCCATTTTCACCATCCCAGGTCGAA...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR TCA 90 bp ATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGGTGGTTCTGTTAAATaGATCTGCATAACAGTAATC +
Preference number: 4 (lower is better)
Translates to: IGGNPEGRVHTRRERELAGGSVK*ICITVI
Trigger: GATTACTGTTATGCAGATTCATTTAACAGAACCACC...AGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR TCA 90 bp GTGATGAGCAGTTTGTTCCTGATTTCCATTCAGAAAACCGTGAGTAGAGGTCCCGTATCAATTTCTTCCTaGCCAGTCAGGAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: VMSSLFLISIQKTVSRGPVSISS*PVRKTR
Trigger: CCTGGTCTTCCTGACTGGTCAGGAAGAAATTGATAC...GGGACCTCTACTCACGGTTTTCTGAATGGAAATCAGGAACAAACTGCTCATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR TCA 90 bp CAGGAGAAGCAGCAACGTAACAGGATGTGCCCAATCTCTCAGAAGCTTCTCTACAATTTGGCCTTCTTCTaGTCTGCAAGGGCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: QEKQQRNRMCPISQKLLYNLAFF*SARACL
Trigger: TAAACAAGCCCTTGCAGATCAGAAGAAGGCCAAATT...GTAGAGAAGCTTCTGAGAGATTGGGCACATCCTGTTACGTTGCTGCTTCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp CCCTCCCCAAATAGCCTTGATTGTAATTCTAATAGCAAGTGTTCCTCCCTCTTCATTCTGGCTGTCTGTTaGAGAGGGCACTGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: PSPNSLDCNSNSKCSSLFILAVC*RGHWKD
Trigger: ATCCTTCCAGTGCCCTCTTCAACAGACAGCCAGAAT...GAAGAGGGAGGAACACTTGCTATTAGAATTACAATCAAGGCTATTTGGGGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR TCA 90 bp CTCTTAGTGTCTGGCATACAGTTCTACAGTAGTTCTAGCATTTACATCACTTCACTCAGGCCTCCAGACTaGAGTGCTCTGTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LLVSGIQFYSSSSIYITSLRPPD*SALWRG
Trigger: TCCTCTCCACAGAGCACTTCAGTCTGGAGGCCTGAG...TGAAGTGATGTAAATGCTAGAACTACTGTAGAACTGTATGCCAGACACTAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTGATCCACATCCTTCATaGTCAGGCTGGTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVDPHPS*SGWSWS
Trigger: GGACCAAGACCAGCCTGAGCATGAAGGATGTGGATC...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp GTGATGAGCAGTTTGTTCCTGATTTCCATTCAGAAAACCGTGAGTAGAGGTCCCTCAAAGATTCGGGTCTaGATCTCACTGGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: VMSSLFLISIQKTVSRGPSKIRV*ISLGRA
Trigger: TGCTCTTCCCAGTGAGATGCAGACCCGAATCTTTGA...GGGACCTCTACTCACGGTTTTCTGAATGGAAATCAGGAACAAACTGCTCATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR GCA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTGCCAGCTCGTTGCTTTaGCTGAGCCTGAGAAATAGG +
Preference number: 4 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVASSLL*LSLRNR
Trigger: CCTATTTCTCAGGCTCAGGCAAAGCAACGAGCTGGC...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp GTGATGAGCAGTTTGTTCCTGATTTCCATTCAGAAAACCGTGAGTAGAGGTCCCATTATGCCTAACATCTaGTTGCGAATGTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VMSSLFLISIQKTVSRGPIMPNI*LRMSWA
Trigger: GGCCCAGGACATTCGCAAGCAGATGTTAGGCATAAT...GGGACCTCTACTCACGGTTTTCTGAATGGAAATCAGGAACAAACTGCTCATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp GCAAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGTTTAGGTTTAACAACTaGATCTTTGCTAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: AKRPCVLVSGDSGDSHHVFRFNN*IFASGR
Trigger: CCTTCCACTAGCAAAGATCCAGTTGTTAAACCTAAA...CACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp TCATCCAACATGGTCCGAACAGAAGGGTTGTCCGGTTGGCAAAGGACTGGGAAGTTTAGGTTTAACAACTaGATCTTTGCTAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SSNMVRTEGLSGWQRTGKFRFNN*IFASGR
Trigger: CCTTCCACTAGCAAAGATCCAGTTGTTAAACCTAAA...CTTCCCAGTCCTTTGCCAACCGGACAACCCTTCTGTTCGGACCATGTTGGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592258.5
CDS-3UTR CCA 90 bp AAAGCCAAGCTATCGTGGTGGGAAGAAGGTGTAAAAATCGGTGGAAACCCTGAATTGACTTTGACCCTCTaGCCTTTGCTCACGACATCA +
Preference number: 4 (lower is better)
Translates to: KAKLSWWEEGVKIGGNPELTLTL*PLLTTS
Trigger: TGATGTCGTGAGCAAAGGCCAGAGGGTCAAAGTCAA...TTCAGGGTTTCCACCGATTTTTACACCTTCTTCCCACCACGATAGCTTGGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTGATCTCCCACTTCTCTaGGTCAGAGATTCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVDLPLL*VRDSGE
Trigger: CTCACCCGAATCTCTGACCCAGAGAAGTGGGAGATC...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CCA 90 bp AGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACCTGGGAGAGGGAGCCGTCTaGGTTCTTGACAATTTTAAT +
Preference number: 4 (lower is better)
Translates to: SFSTSTTSRPAFRKFRNLGEGAV*VLDNFN
Trigger: ATTAAAATTGTCAAGAACCCAGACGGCTCCCTCTCC...CAGGTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp CTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCCATTGCATCATTGCTGCTTaGGAGAGGGAGCCGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LSIKYTQYSLFPWVFISHCIIAA*EREPSG
Trigger: CCCAGACGGCTCCCTCTCCCAAGCAGCAATGATGCA...ATGGGAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp CAGACAGTGATGAGCAGTTTGTTCCTGATTTCCATTCAGAAAACCGTGAGTAGACCTTCAGTTTGTAGATaGGCAGGCTCTCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: QTVMSSLFLISIQKTVSRPSVCR*AGSPSA
Trigger: AGCAGAGGGAGAGCCTGCCCATCTACAAACTGAAGG...TCTACTCACGGTTTTCTGAATGGAAATCAGGAACAAACTGCTCATCACTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTCTTTCTGCTGCCTGGTaGAGCTGGGTCAAAGATTCG +
Preference number: 4 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVLSAAW*SWVKDS
Trigger: CGAATCTTTGACCCAGCTCCACCAGGCAGCAGAAAG...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CCA 90 bp GCAAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGGGTCAATCCCTGTCTTaGAATTGTAAACTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: AKRPCVLVSGDSGDSHHVGQSLS*NCKLSV
Trigger: AACAGAAAGTTTACAATTCCAAGACAGGGATTGACC...CACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp AAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGTGCAAAGTTTCCATAGGTaGGGCATCCATGAAATCAAA +
Preference number: 4 (lower is better)
Translates to: KEALRSGFRGFRGFSSCVQSFHR*GIHEIK
Trigger: TTTGATTTCATGGATGCCCCACCTATGGAAACTTTG...CACACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp GTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAGTTCTCATAGCACCATaGGTTGGAGAACTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: VHTRRERELAEKQHPGKEVLIAP*VGELVV
Trigger: AACAACAAGTTCTCCAACCCATGGTGCTATGAGAAC...TTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp TTGATTGTAATTCTAATAGCAAGTGTTCCTCCCTCTTCCATCCCGCTTGAATACAGAACCCACTGCAGATaGCCTTCTGCACTCGGACTG +
Preference number: 4 (lower is better)
Translates to: LIVILIASVPPSSIPLEYRTHCR*PSALGL
Trigger: CAGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCT...GTATTCAAGCGGGATGGAAGAGGGAGGAACACTTGCTATTAGAATTACAATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR CCA 90 bp CAGACAGTGATGAGCAGTTTGTTCCTGATTTCCATTCAGAAAACCGTGAGTAGAGACCTTGAAGAAGGCTaGGGCAAACTCCACAAGCCA +
Preference number: 4 (lower is better)
Translates to: QTVMSSLFLISIQKTVSRDLEEG*GKLHKP
Trigger: TGGCTTGTGGAGTTTGCCCCAGCCTTCTTCAAGGTC...TCTACTCACGGTTTTCTGAATGGAAATCAGGAACAAACTGCTCATCACTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp GAACAGAAGGGTTGTCCGGTTGGCAAAGGACTGGGAAGAGTTCCTTCAGCTTTTCAAGTCCCAACAGGATaGATCATAGAGATCAAACAG +
Preference number: 4 (lower is better)
Translates to: EQKGCPVGKGLGRVPSAFQVPTG*IIEIKQ
Trigger: CTGTTTGATCTCTATGATCCATCCTGTTGGGACTTG...AAAAGCTGAAGGAACTCTTCCCAGTCCTTTGCCAACCGGACAACCCTTCTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592258.5
CDS-3UTR TCA 90 bp CAGACAGTGATGAGCAGTTTGTTCCTGATTTCCATTCAGAAAACCGTGAGTAGAATGACAATCAGGATCTaGTTGTCATGGACGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QTVMSSLFLISIQKTVSRMTIRI*LSWTAW
Trigger: CCAGGCCGTCCATGACAATCAGATCCTGATTGTCAT...TCTACTCACGGTTTTCTGAATGGAAATCAGGAACAAACTGCTCATCACTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR TCA 90 bp AGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACCTGATCCTGTCTCACCAATaGCAATCAGGATCTGATTGT +
Preference number: 4 (lower is better)
Translates to: SFSTSTTSRPAFRKFRNLILSHQ*QSGSDC
Trigger: ACAATCAGATCCTGATTGTCATTGGTGAGACAGGAT...CAGGTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp GAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGTCCTGCCGTTTCTaGACTGTCTTTTTCAACAAT +
Preference number: 4 (lower is better)
Translates to: ELAEKQHPGKERSPQAEMMSCRF*TVFFNN
Trigger: ATTGTTGAAAAAGACAGTTCAGAAACGGCAGGACAT...CATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR GCA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTTCAGCATTTCCTCACTaGAGCCCAGATGCACAGACA +
Preference number: 4 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVSAFPH*SPDAQT
Trigger: TGTCTGTGCATCTGGGCTGCAGTGAGGAAATGCTGA...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp TTGATTGTAATTCTAATAGCAAGTGTTCCTCCCTCTTCCATCCCGCTTGAATACTACGGAAGAACCCACTaGAGATGGCCTTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: LIVILIASVPPSSIPLEYYGRTH*RWPSAL
Trigger: GAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCCGTA...GTATTCAAGCGGGATGGAAGAGGGAGGAACACTTGCTATTAGAATTACAATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR GCA 90 bp CTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCCATGAGGTCCCATGTCCCTaGACAAGATGCTCACCCACT +
Preference number: 4 (lower is better)
Translates to: LSIKYTQYSLFPWVFISHEVPCP*TRCSPT
Trigger: AGTGGGTGAGCATCTTGTGCAGGGACATGGGACCTC...ATGGGAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR GCA 90 bp GTGATGAGCAGTTTGTTCCTGATTTCCATTCAGAAAACCGTGAGTAGAGGTCCCTTAATGCCTATTTTGTaGCAGAGTCTGTACTGGGGG +
Preference number: 4 (lower is better)
Translates to: VMSSLFLISIQKTVSRGPLMPIL*QSLYWG
Trigger: CCCCCAGTACAGACTCTGGCACAAAATAGGCATTAA...GGGACCTCTACTCACGGTTTTCTGAATGGAAATCAGGAACAAACTGCTCATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp CGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCATTTAGGTTTAACAACTaGATCTTTGCTAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: RRERELAEKQHPGKERSPFRFNN*IFASGR
Trigger: CCTTCCACTAGCAAAGATCCAGTTGTTAAACCTAAA...TGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp CAGACAGTGATGAGCAGTTTGTTCCTGATTTCCATTCAGAAAACCGTGAGTAGAAGTCCTCAAATCGAATaGTGTAGCCCACCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: QTVMSSLFLISIQKTVSRSPQIE*CSPPLG
Trigger: GCCAAGAGGTGGGCTACACCATTCGATTTGAGGACT...TCTACTCACGGTTTTCTGAATGGAAATCAGGAACAAACTGCTCATCACTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTGGATTTCCGGCACGTTaGTGGTCAGCATTTCATCTC +
Preference number: 4 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVGFPAR*WSAFHL
Trigger: GAGATGAAATGCTGACCACCAACGTGCCGGAAATCC...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CCA 90 bp CAGACAGTGATGAGCAGTTTGTTCCTGATTTCCATTCAGAAAACCGTGAGTAGAGCTAAGTTGGTTCTCTaGATTTCCGGCACGTTGGTG +
Preference number: 4 (lower is better)
Translates to: QTVMSSLFLISIQKTVSRAKLVL*ISGTLV
Trigger: CACCAACGTGCCGGAAATCCAGAGAACCAACTTAGC...TCTACTCACGGTTTTCTGAATGGAAATCAGGAACAAACTGCTCATCACTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp ACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGCTCAGGTACCAGACACAAAGTTTCCATAGGTaGGGCATCCATGAAATCAAA +
Preference number: 4 (lower is better)
Translates to: TQGGNLFSDFSLQLRYQTQSFHR*GIHEIK
Trigger: TTTGATTTCATGGATGCCCCACCTATGGAAACTTTG...TGTCTGGTACCTGAGCTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp AAAGCCAAGCTATCGTGGTGGGAAGAAGGTGTAAAAATCGGTGGAAACCCTGAAACAGCATGGATACAATaGTCAGCATTTCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: KAKLSWWEEGVKIGGNPETAWIQ*SAFPHC
Trigger: GCAGTGAGGAAATGCTGACCATTGTATCCATGCTGT...TTCAGGGTTTCCACCGATTTTTACACCTTCTTCCCACCACGATAGCTTGGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp AAAGCCAAGCTATCGTGGTGGGAAGAAGGTGTAAAAATCGGTGGAAACCCTGAACATAGCACCATGGGTTaGAGAACTTGTTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: KAKLSWWEEGVKIGGNPEHSTMG*RTCCSS
Trigger: GGAAGAACAACAAGTTCTCCAACCCATGGTGCTATG...TTCAGGGTTTCCACCGATTTTTACACCTTCTTCCCACCACGATAGCTTGGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp CTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCCATAGAACCCACTGCAGATaGCCTTCTGCACTCGGACTG +
Preference number: 4 (lower is better)
Translates to: LSIKYTQYSLFPWVFISHRTHCR*PSALGL
Trigger: CAGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCT...ATGGGAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp AGAAGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACGTTTTCTGTTTGGAGTaGGGAAAGGGAGGTTTTGAC +
Preference number: 4 (lower is better)
Translates to: RSFSTSTTSRPAFRKFRNVFCLE*GKGGFD
Trigger: GTCAAAACCTCCCTTTCCCCACTCCAAACAGAAAAC...GTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp TTCAAATCCTCAAACTTGGAGAGGCACTGCTCCAATGAGACAGCTACAGCAACCAAAGCCAAGCTATCGTaGTGGGAAGAAGGTGTAAAA +
Preference number: 4 (lower is better)
Translates to: FKSSNLERHCSNETATATKAKLS*WEEGVK
Trigger: TTTTACACCTTCTTCCCACCACGATAGCTTGGCTTT...GGTTGCTGTAGCTGTCTCATTGGAGCAGTGCCTCTCCAAGTTTGAGGATTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587574.1
CDS-3UTR TCA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTAATTTGGCCTTCTTCTaGTCTGCAAGGGCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCNLAFF*SARACL
Trigger: TAAACAAGCCCTTGCAGATCAGAAGAAGGCCAAATT...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR GCA 90 bp CAGGAGAAGCAGCAACGTAACAGGATGTGCCCAATCTCTCAGAAGCTTCTCTACAGAATCCGTAAATTCTaGACCATTTTTGACGAGAGA +
Preference number: 4 (lower is better)
Translates to: QEKQQRNRMCPISQKLLYRIRKF*TIFDER
Trigger: TCTCTCGTCAAAAATGGTGCAGAATTTACGGATTCT...GTAGAGAAGCTTCTGAGAGATTGGGCACATCCTGTTACGTTGCTGCTTCTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp CAGACAGTGATGAGCAGTTTGTTCCTGATTTCCATTCAGAAAACCGTGAGTAGATTGCCCCCAAAGGCATaGTTCTTCCACTCAGGAATA +
Preference number: 4 (lower is better)
Translates to: QTVMSSLFLISIQKTVSRLPPKA*FFHSGI
Trigger: TATTCCTGAGTGGAAGAAGCATGCCTTTGGGGGCAA...TCTACTCACGGTTTTCTGAATGGAAATCAGGAACAAACTGCTCATCACTGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR GCA 90 bp TTGATTGTAATTCTAATAGCAAGTGTTCCTCCCTCTTCCATCCCGCTTGAATACCTCGGACTGTGGACTTaGCACAGGAAACAACATCCA +
Preference number: 4 (lower is better)
Translates to: LIVILIASVPPSSIPLEYLGLWT*HRKQHP
Trigger: TGGATGTTGTTTCCTGTGGCAAGTCCACAGTCCGAG...GTATTCAAGCGGGATGGAAGAGGGAGGAACACTTGCTATTAGAATTACAATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR GCA 90 bp CTCTTAGTGTCTGGCATACAGTTCTACAGTAGTTCTAGCATTTACATCACTTCACACTCACCATGTCCCTaGACAAGATGCTCACCCACT +
Preference number: 4 (lower is better)
Translates to: LLVSGIQFYSSSSIYITSHSPCP*TRCSPT
Trigger: AGTGGGTGAGCATCTTGTGCAGGGACATGGTGAGTG...TGAAGTGATGTAAATGCTAGAACTACTGTAGAACTGTATGCCAGACACTAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTAAAATGGACATCGCCTaGCTTCAAGGAGCTCACAGT +
Preference number: 4 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVKMDIA*LQGAHS
Trigger: ACTGTGAGCTCCTTGAAGGCAGGCGATGTCCATTTT...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp CTCTTAGTGTCTGGCATACAGTTCTACAGTAGTTCTAGCATTTACATCACTTCAGTGCCCTCTCAGGAATaGAGGCTCTTCCTCAACCAA +
Preference number: 4 (lower is better)
Translates to: LLVSGIQFYSSSSIYITSVPSQE*RLFLNQ
Trigger: TTGGTTGAGGAAGAGCCTCCATTCCTGAGAGGGCAC...TGAAGTGATGTAAATGCTAGAACTACTGTAGAACTGTATGCCAGACACTAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp CTCTTAGTGTCTGGCATACAGTTCTACAGTAGTTCTAGCATTTACATCACTTCAGTTCCCGCCTTTCTTTaGCCAAGGCACTCTGCATCA +
Preference number: 4 (lower is better)
Translates to: LLVSGIQFYSSSSIYITSVPAFL*PRHSAS
Trigger: TGATGCAGAGTGCCTTGGCCAAAGAAAGGCGGGAAC...TGAAGTGATGTAAATGCTAGAACTACTGTAGAACTGTATGCCAGACACTAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp GTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAGGTCAATCCCTGTCTTaGAATTGTAAACTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: VHTRRERELAEKQHPGKEGQSLS*NCKLSV
Trigger: AACAGAAAGTTTACAATTCCAAGACAGGGATTGACC...TTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CCA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTCTGTGCTTGCTAAGTTaGTTCTCTGGATTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVLCLLS*FSGFPA
Trigger: TGCCGGAAATCCAGAGAACCAACTTAGCAAGCACAG...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CCA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTTCTCATAGCACCATaGGTTGGAGAACTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCVLIAP*VGELVV
Trigger: AACAACAAGTTCTCCAACCCATGGTGCTATGAGAAC...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
3UTR CAA 72 bp CATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTaGATGCAATGTGTCTCTGTGTTAGATATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: HPGAAQIVPFLK*MQCVSVLDMSS
Trigger: GGAGCTCATATCTAACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
3UTR CAA 72 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTaGAAGTTGATGCAATGTGTCTCTGTGTTAGATATG +
Preference number: 4 (lower is better)
Translates to: PSHPGAAQIVPF*KLMQCVSVLDM
Trigger: CATATCTAACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
3UTR CAA 72 bp CCTCGGACTCTTTCTGAATTGTCTTTAGGGTGTGGTTaGCTGCCCAGTGACAACATACATTCCTTTATATCC +
Preference number: 4 (lower is better)
Translates to: PRTLSELSLGCG*LPSDNIHSFIS
Trigger: GGATATAAAGGAATGTATGTTGTCACTGGGCAGCAAACCACACCCTAAAGACAATTCAGAAAGAGTCCGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp CTCTTAGTGTCTGGCATACAGTTCTACAGTAGTTCTAGCATTTACATCACTTCACAAGGTCCTTGTCGTTaGTCCCCAAGTGATTGTCCA +
Preference number: 4 (lower is better)
Translates to: LLVSGIQFYSSSSIYITSQGPCR*SPSDCP
Trigger: TGGACAATCACTTGGGGATCAACGACAAGGACCTTG...TGAAGTGATGTAAATGCTAGAACTACTGTAGAACTGTATGCCAGACACTAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp AAACCTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCTACTTCAGGAGCACTaGCAAGGGACAAGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: KPKHKIYTVFPISLGLHLLLQEH*QGTSEW
Trigger: CCACTCACTTGTCCCTTGTCAGTGCTCCTGAAGTAG...GAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR GCA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCGAGTTGAGAAAATaGTCAGTTAAGACAGTCAGT +
Preference number: 4 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCVELRK*SVKTVS
Trigger: ACTGACTGTCTTAACTGAGCATTTTCTCAACTCGAC...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CCA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTGGAGAGGGAGCCGTCTaGGTTCTTGACAATTTTAAT +
Preference number: 4 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVGEGAV*VLDNFN
Trigger: ATTAAAATTGTCAAGAACCCAGACGGCTCCCTCTCC...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CCA 90 bp AAACCTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCGGGTCTGCATCTCACTaGGAAGAGCAGAGTACACTG +
Preference number: 4 (lower is better)
Translates to: KPKHKIYTVFPISLGLHLGSASH*EEQSTL
Trigger: CAGTGTACTCTGCTCTTCCCAGTGAGATGCAGACCC...GAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTACAGCATGGATACAATaGTCAGCATTTCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVTAWIQ*SAFPHC
Trigger: GCAGTGAGGAAATGCTGACCATTGTATCCATGCTGT...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CCA 90 bp CTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCCATTGGTCCCCTTCAGTCTaGTGGAATTTGGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LSIKYTQYSLFPWVFISHWSPSV*WNLAFF
Trigger: GAAGAAGGCCAAATTCCACCAGACTGAAGGGGACCA...ATGGGAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp TTGATTGTAATTCTAATAGCAAGTGTTCCTCCCTCTTCCATCCCGCTTGAATACGTTCAGGAGGTTTCCTaGTTGGATTCTTCAGTGCGT +
Preference number: 4 (lower is better)
Translates to: LIVILIASVPPSSIPLEYVQEVS*LDSSVR
Trigger: ACGCACTGAAGAATCCAACCAGGAAACCTCCTGAAC...GTATTCAAGCGGGATGGAAGAGGGAGGAACACTTGCTATTAGAATTACAATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR TCA 90 bp CTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCCATCTCAGTGCAAACCTTTaGCACCAAAGACAGGTACTC +
Preference number: 4 (lower is better)
Translates to: LSIKYTQYSLFPWVFISHLSANL*HQRQVL
Trigger: GAGTACCTGTCTTTGGTGTCAAAGGTTTGCACTGAG...ATGGGAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR TCA 90 bp CTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCCATTCTTCTCCAGTCTCTTaGTCCACATCCTTCATGCTC +
Preference number: 4 (lower is better)
Translates to: LSIKYTQYSLFPWVFISHSSPVS*STSFML
Trigger: GAGCATGAAGGATGTGGATCAAGAGACTGGAGAAGA...ATGGGAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR TCA 90 bp CTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCCATTTCGACCTGGGATGGTaGAAATGGGAGCTTCATAGA +
Preference number: 4 (lower is better)
Translates to: LSIKYTQYSLFPWVFISHFDLGW*KWELHR
Trigger: TCTATGAAGCTCCCATTTTCACCATCCCAGGTCGAA...ATGGGAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR TCA 90 bp AGAAGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACGGTGGTTCTGTTAAATaGATCTGCATAACAGTAATC +
Preference number: 4 (lower is better)
Translates to: RSFSTSTTSRPAFRKFRNGGSVK*ICITVI
Trigger: GATTACTGTTATGCAGATTCATTTAACAGAACCACC...GTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR TCA 90 bp CTCTTAGTGTCTGGCATACAGTTCTACAGTAGTTCTAGCATTTACATCACTTCAGTATCAATTTCTTCCTaGCCAGTCAGGAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: LLVSGIQFYSSSSIYITSVSISS*PVRKTR
Trigger: CCTGGTCTTCCTGACTGGTCAGGAAGAAATTGATAC...TGAAGTGATGTAAATGCTAGAACTACTGTAGAACTGTATGCCAGACACTAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp CTCTTAGTGTCTGGCATACAGTTCTACAGTAGTTCTAGCATTTACATCACTTCATTGCCCCCAAAGGCATaGTTCTTCCACTCAGGAATA +
Preference number: 4 (lower is better)
Translates to: LLVSGIQFYSSSSIYITSLPPKA*FFHSGI
Trigger: TATTCCTGAGTGGAAGAAGCATGCCTTTGGGGGCAA...TGAAGTGATGTAAATGCTAGAACTACTGTAGAACTGTATGCCAGACACTAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp CTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCCATAGTCAGCGATGTCTCTaGGATATTGGTGGCAATCAC +
Preference number: 4 (lower is better)
Translates to: LSIKYTQYSLFPWVFISHSQRCL*DIGGNH
Trigger: GTGATTGCCACCAATATCGCAGAGACATCGCTGACT...ATGGGAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR GCA 90 bp AAACCTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCGCAAAGGAACAATCTTaGCTTTCAGCGCCGTCGGAA +
Preference number: 4 (lower is better)
Translates to: KPKHKIYTVFPISLGLHLAKEQS*LSAPSE
Trigger: TTCCGACGGCGCTGAAAGGCAAGATTGTTCCTTTGC...GAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp CTCTTAGTGTCTGGCATACAGTTCTACAGTAGTTCTAGCATTTACATCACTTCATTGACTTTGACCCTCTaGCCTTTGCTCACGACATCA +
Preference number: 4 (lower is better)
Translates to: LLVSGIQFYSSSSIYITSLTLTL*PLLTTS
Trigger: TGATGTCGTGAGCAAAGGCCAGAGGGTCAAAGTCAA...TGAAGTGATGTAAATGCTAGAACTACTGTAGAACTGTATGCCAGACACTAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CCA 90 bp GTGATGAGCAGTTTGTTCCTGATTTCCATTCAGAAAACCGTGAGTAGAGGTCCCGGTCAATCCCTGTCTTaGAATTGTAAACTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: VMSSLFLISIQKTVSRGPGQSLS*NCKLSV
Trigger: AACAGAAAGTTTACAATTCCAAGACAGGGATTGACC...GGGACCTCTACTCACGGTTTTCTGAATGGAAATCAGGAACAAACTGCTCATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp CCCCAAATAGCCTTGATTGTAATTCTAATAGCAAGTGTTCCTCCCTCTTCCATCGTTCTCATAGCACCATaGGTTGGAGAACTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: PQIALIVILIASVPPSSIVLIAP*VGELVV
Trigger: AACAACAAGTTCTCCAACCCATGGTGCTATGAGAAC...GATGGAAGAGGGAGGAACACTTGCTATTAGAATTACAATCAAGGCTATTTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR TCA 90 bp AAACCTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCAGCAATCATCTGTTTaGTCTCCCACTTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: KPKHKIYTVFPISLGLHLQQSSV*SPTSLG
Trigger: ACCCAGAGAAGTGGGAGATCAAACAGATGATTGCTG...GAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR GCA 90 bp AAACCTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCTCACTGCAGCCCAGATaGACAGACATGATGAGCATT +
Preference number: 4 (lower is better)
Translates to: KPKHKIYTVFPISLGLHLSLQPR*TDMMSI
Trigger: AATGCTCATCATGTCTGTGCATCTGGGCTGCAGTGA...GAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR GCA 90 bp CTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCCATGGCCTTCTTCTGATCTaGAAGGGCTTGTTTATCCTT +
Preference number: 4 (lower is better)
Translates to: LSIKYTQYSLFPWVFISHGLLLI*KGLFIL
Trigger: AAGGATAAACAAGCCCTTGCAGATCAGAAGAAGGCC...ATGGGAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CCA 90 bp CTCTTAGTGTCTGGCATACAGTTCTACAGTAGTTCTAGCATTTACATCACTTCAATATTCTCCAGGCATTaGGTTCCTCATAGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: LLVSGIQFYSSSSIYITSIFSRH*VPHSGC
Trigger: ACAACCGCTATGAGGAACCCAATGCCTGGAGAATAT...TGAAGTGATGTAAATGCTAGAACTACTGTAGAACTGTATGCCAGACACTAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR GCA 90 bp CTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCCATAATTGTCCTCTCATGTaGCTCGTCCAACATGATGAT +
Preference number: 4 (lower is better)
Translates to: LSIKYTQYSLFPWVFISHNCPLM*LVQHDD
Trigger: ATCATCATGTTGGACGAGGCACATGAGAGGACAATT...ATGGGAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR GCA 90 bp AAACCTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCGGTTCAAGACGCTGTTaGTTCTTCTGTTTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: KPKHKIYTVFPISLGLHLGSRRC*FFCLLS
Trigger: GCTAAGCAAACAGAAGAAGCAACAGCGTCTTGAACC...GAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp CGGGTGATCCCCCAGCACGGCCCGGCTAGTGCTGATGCTGAAAGACAAGGCTGGTCCTCTGACACTCTTTaGGCCACCGACATAGCTGCC +
Preference number: 5 (lower is better)
Translates to: RVIPQHGPASADAERQGWSSDTL*ATDIAA
Trigger: GGCAGCTATGTCGGTGGCCAAAAGAGTGTCAGAGGA...CCAGCCTTGTCTTTCAGCATCAGCACTAGCCGGGCCGTGCTGGGGGATCACCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS TCA 90 bp CAAATCACGTCCAGGCGGGATGAAGTAAACCTGGACCGAGGAGCCTaGCCCAGCTGCGGAGCTCACACATGCCCCATAGGGACGGTCCAT +
Preference number: 5 (lower is better)
Translates to: QITSRRDEVNLDRGA*PSCGAHTCPIGTVH
Trigger: ATGGACCGTCCCTATGGGGCATGTGTGAGCTCCGCAGCTGGGTCAGGCTCCTCGGTCCAGGTTTACTTCATCCCGCCTGGACGTGATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587574.1
CDS TCA 90 bp GGGCTGCAGGAGAGACAGTCAAAGCCAAATCACGTCCAGGCGGGATaGAGTAAACCTGGACCGAGGAGCCTGACCCAGCTGCGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: GLQERQSKPNHVQAG*SKPGPRSLTQLRSS
Trigger: TGAGCTCCGCAGCTGGGTCAGGCTCCTCGGTCCAGGTTTACTTCATCCCGCCTGGACGTGATTTGGCTTTGACTGTCTCTCCTGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587574.1
CDS-3UTR CAA 90 bp CTGGTTGGATTCTTCAGTGCGTTTTGGTGGGGCCTGAGGGTGTCGCTGGTGGGGCCTCTTCCATCCCGCTaGAATACCTCTGCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LVGFFSAFWWGLRVSLVGPLPSR*NTSASR
Trigger: CCTGGAGGCAGAGGTATTCAAGCGGGATGGAAGAGG...CCCCACCAGCGACACCCTCAGGCCCCACCAAAACGCACTGAAGAATCCAACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS GCA 90 bp CGAGTGAGCAGGCCCTCGTCATCCAGGGCCCCCAGTGTGTACAGCTaGTCCATGGCTGTGATCAAAGTTTCCATAGGTGGGGCATCCATG +
Preference number: 5 (lower is better)
Translates to: RVSRPSSSRAPSVYS*SMAVIKVSIGGASM
Trigger: CATGGATGCCCCACCTATGGAAACTTTGATCACAGCCATGGAGCAGCTGTACACACTGGGGGCCCTGGATGACGAGGGCCTGCTCACTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS-3UTR CAA 90 bp CGGGCAGCTGGTCCGACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGACGACATCAGCTACATaGGCCACACGACCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: RAAGPTQGGNLFSDFSLQTTSAT*ATRPSR
Trigger: GCGGGAGGGTCGTGTGGCCAATGTAGCTGATGTCGT...CTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGTCGGACCAGCTGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp CTCCTGCTAGCTGGGGCATCAGGGCACTCACCATGTCCCTGCACAAGATGCTCAATGCTCAGGCTGGTCTaGGTCCCAGTGAAGGACAGC +
Preference number: 5 (lower is better)
Translates to: LLLAGASGHSPCPCTRCSMLRLV*VPVKDS
Trigger: GCTGTCCTTCACTGGGACCAAGACCAGCCTGAGCAT...TGAGCATCTTGTGCAGGGACATGGTGAGTGCCCTGATGCCCCAGCTAGCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp AGTAGAGGTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCATTCGGGTGAGGCGCTaGCGTTCCAGTGAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: SRGPMSLHKMLTHSTFPSIRVRR*RSSESS
Trigger: GGACGACTCACTGGAACGCAAGCGCCTCACCCGAAT...GGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGACCTCTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp AGTAGAGGTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCCTGCATCATTGCTGCTaGGGAGAGGGAGCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: SRGPMSLHKMLTHSTFPSLHHCC*GEGAVW
Trigger: CCAGACGGCTCCCTCTCCCAAGCAGCAATGATGCAG...GGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGACCTCTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp GTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTATGCCTAACATCTGCTaGCGAATGTCCTGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: VPCPCTRCSPTPPSHPGAMPNIC*RMSWAR
Trigger: CCGGGCCCAGGACATTCGCAAGCAGATGTTAGGCAT...AGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp CCAGCTTTCCGTAAGTTCCGAAACCTGGCCTGGCAAGACCTGCCTGATGTTCCGGGCTGGAAGTCTGGGTaGTACGTCGTTTCCGAGCGC +
Preference number: 5 (lower is better)
Translates to: PAFRKFRNLAWQDLPDVPGWKSG*YVVSER
Trigger: GCGCTCGGAAACGACGTACAACCCAGACTTCCAGCC...CGGAACATCAGGCAGGTCTTGCCAGGCCAGGTTTCGGAACTTACGGAAAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp GACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGGCTACGCACGGAGAAGACTCTaGGGGCTGGCTCAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: DSCILRTSLSSISPSPGYARRRL*GLAQRQ
Trigger: CTGCCTCTGAGCCAGCCCCAAGAGTCTTCTCCGTGC...GTAGCCAGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS GCA 90 bp CGCTGGGCCTGTTTGAGTTCCCGCCTTTCTTTGGCCAAGGCACTCTaGATCATTGCTGCTTGGGAGAGGGAGCCGTCTGGGTTCTTGACA +
Preference number: 5 (lower is better)
Translates to: RWACLSSRLSLAKAL*IIAAWEREPSGFLT
Trigger: TGTCAAGAACCCAGACGGCTCCCTCTCCCAAGCAGCAATGATGCAGAGTGCCTTGGCCAAAGAAAGGCGGGAACTCAAACAGGCCCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 90 bp CCTGCTGGTCGATCAGTGTCCGGTAACCCTCCTGCGGGTCTTTCTTaGCAGCATTACGGAAGAACCCACTGCAGATGGCCTTCTGCACTC +
Preference number: 5 (lower is better)
Translates to: PAGRSVSGNPPAGLS*QHYGRTHCRWPSAL
Trigger: GAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCCGTAATGCTGCCAAGAAAGACCCGCAGGAGGGTTACCGGACACTGATCGACCAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000589898.1
ENST00000650571.1
CDS-3UTR CAA 90 bp AAGGCTGGAAGTCTGGGTTGTACGTCGTTTCCGAGCGCAAAGAGGCCCTGCGTTAGGCACTCTGCATCATaGCTGCTTGGGAGAGGGAGC +
Preference number: 5 (lower is better)
Translates to: KAGSLGCTSFPSAKRPCVRHSAS*LLGRGS
Trigger: GCTCCCTCTCCCAAGCAGCAATGATGCAGAGTGCCT...AACGCAGGGCCTCTTTGCGCTCGGAAACGACGTACAACCCAGACTTCCAGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp CGGGCAGCTGGTCCGACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGAGGCACTCTGCATCATaGCTGCTTGGGAGAGGGAGC +
Preference number: 5 (lower is better)
Translates to: RAAGPTQGGNLFSDFSLQRHSAS*LLGRGS
Trigger: GCTCCCTCTCCCAAGCAGCAATGATGCAGAGTGCCT...CTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGTCGGACCAGCTGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp GTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTTCCTCTGACACTCTTTaGGCCACCGACATAGCTGCC +
Preference number: 5 (lower is better)
Translates to: VPCPCTRCSPTPPSHPGASSDTL*ATDIAA
Trigger: GGCAGCTATGTCGGTGGCCAAAAGAGTGTCAGAGGA...AGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp GGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAGCTCTGCCAGCTCGTaGCTTTGCCTGAGCCTGAGA +
Preference number: 5 (lower is better)
Translates to: GRVHTRRERELAEKQHPGSSASS*LCLSLR
Trigger: TCTCAGGCTCAGGCAAAGCAACGAGCTGGCAGAGCT...CCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTGTTGGGTCTGAGACCTaGAAGAAGGCTGGGGCAAAC +
Preference number: 5 (lower is better)
Translates to: VPCPCTRCSPTPPSHPGAVGSET*KKAGAN
Trigger: GTTTGCCCCAGCCTTCTTCAAGGTCTCAGACCCAAC...AGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS TCA 90 bp CAGCCAGCCCTCCTACCCATCCAGAAACTTGAGCCTGGTCCGGAGTaGGTGCTGGAGTCCAGGAAGTGCTATGGAAGCAGCTGTGAATCA +
Preference number: 5 (lower is better)
Translates to: QPALLPIQKLEPGPE*VLESRKCYGSSCES
Trigger: TGATTCACAGCTGCTTCCATAGCACTTCCTGGACTCCAGCACTCACTCCGGACCAGGCTCAAGTTTCTGGATGGGTAGGAGGGCTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588996.1
CDS CCA 90 bp CCAGCTCAGTGCAAACCTTTGACACCAAAGACAGGTACTCGAGTTTaGCAAGTTCTTCCGCGGGGCCTGGCTCCGACCCGATTAAGGCTC +
Preference number: 5 (lower is better)
Translates to: PAQCKPLTPKTGTRV*QVLPRGLAPTRLRL
Trigger: GAGCCTTAATCGGGTCGGAGCCAGGCCCCGCGGAAGAACTTGCCAAACTCGAGTACCTGTCTTTGGTGTCAAAGGTTTGCACTGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000592258.5
ENST00000650571.1
CDS-3UTR CAA 90 bp GGAGGTGGGTGCCCAGTCCCCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTAAGCCATGGCTATAGCTaGCCCAGAACCTCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: GGGCPVPVSPLVSFEVPVSHGYS*PRTSFL
Trigger: GAGGAAGGAGGTTCTGGGCAAGCTATAGCCATGGCT...TACAGGGACCTCAAATGAAACCAAAGGGGAAACGGGGACTGGGCACCCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGACAGGTACTCGAGTTaGGCAAGTTCTTCCGCGGGG +
Preference number: 5 (lower is better)
Translates to: SRDSCILRTSLSSISPSPDRYSS*ASSSAG
Trigger: CCCCGCGGAAGAACTTGCCAAACTCGAGTACCTGTC...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CAA 90 bp GTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTTCCGCTTCTTCTTCTTaGTCCTGTCCCGGTGTTCAG +
Preference number: 5 (lower is better)
Translates to: VPCPCTRCSPTPPSHPGASASSS*SCPGVQ
Trigger: CTGAACACCGGGACAGGACAAAGAAGAAGAAGCGGA...AGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp AACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGACGACATCAGCTACATaGGCCACACGACCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: NPEGRVHTRRERELAEKQTTSAT*ATRPSR
Trigger: GCGGGAGGGTCGTGTGGCCAATGTAGCTGATGTCGT...CTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GTAACAGCTAAGCAGAGAGGAGTCAGGAAGCACGGAGAAGACTCTTGGGGCTGGATGCTCAGGCTGGTCTaGGTCCCAGTGAAGGACAGC +
Preference number: 5 (lower is better)
Translates to: VTAKQRGVRKHGEDSWGWMLRLV*VPVKDS
Trigger: GCTGTCCTTCACTGGGACCAAGACCAGCCTGAGCAT...CCAGCCCCAAGAGTCTTCTCCGTGCTTCCTGACTCCTCTCTGCTTAGCTGTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp GCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCATTCGGGTGAGGCGCTaGCGTTCCAGTGAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: AEKQHPGKERSPQAEMMAIRVRR*RSSESS
Trigger: GGACGACTCACTGGAACGCAAGCGCCTCACCCGAAT...GGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTGCATCATTGCTGCTaGGGAGAGGGAGCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: AEKQHPGKERSPQAEMMALHHCC*GEGAVW
Trigger: CCAGACGGCTCCCTCTCCCAAGCAGCAATGATGCAG...GGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGGCTACTCCCGCTGGGCCTGTTaGAGTTCCCGCCTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: DSCILRTSLSSISPSPGYSRWAC*SSRLSL
Trigger: CAAAGAAAGGCGGGAACTCAAACAGGCCCAGCGGGA...GTAGCCAGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CAA 90 bp CAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCAGCAGAAGCTCTGCCAGCTCGTaGCTTTGCCTGAGCCTGAGA +
Preference number: 5 (lower is better)
Translates to: QNQEALSLMKGQGSAASRSSASS*LCLSLR
Trigger: TCTCAGGCTCAGGCAAAGCAACGAGCTGGCAGAGCT...TCTGCTGGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp GTAACAGCTAAGCAGAGAGGAGTCAGGAAGCACGGAGAAGACTCTTGGGGCTGGAGCTCTGCCAGCTCGTaGCTTTGCCTGAGCCTGAGA +
Preference number: 5 (lower is better)
Translates to: VTAKQRGVRKHGEDSWGWSSASS*LCLSLR
Trigger: TCTCAGGCTCAGGCAAAGCAACGAGCTGGCAGAGCT...CCAGCCCCAAGAGTCTTCTCCGTGCTTCCTGACTCCTCTCTGCTTAGCTGTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp CTCCTGCTAGCTGGGGCATCAGGGCACTCACCATGTCCCTGCACAAGATGCTCATCACGCATGTATTCCTaGGTGGTGAGCACCAGCTCA +
Preference number: 5 (lower is better)
Translates to: LLLAGASGHSPCPCTRCSSRMYS*VVSTSS
Trigger: TGAGCTGGTGCTCACCACCAAGGAATACATGCGTGA...TGAGCATCTTGTGCAGGGACATGGTGAGTGCCCTGATGCCCCAGCTAGCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp AAGGCTGGAAGTCTGGGTTGTACGTCGTTTCCGAGCGCAAAGAGGCCCTGCGTTACAATGCCCTGCCCCTaGATTACTGGCCTGGGCTTA +
Preference number: 5 (lower is better)
Translates to: KAGSLGCTSFPSAKRPCVTMPCP*ITGLGL
Trigger: TAAGCCCAGGCCAGTAATCAAGGGGCAGGGCATTGT...AACGCAGGGCCTCTTTGCGCTCGGAAACGACGTACAACCCAGACTTCCAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS TCA 90 bp CCACTTCTCTGGGTCAGAGATTCGGGTGAGGCGCTTGCGTTCCAGTaGGTCGTCCTCTACTTCAGGAGCACTGACAAGGGACAAGTGAGT +
Preference number: 5 (lower is better)
Translates to: PLLWVRDSGEALAFQ*VVLYFRSTDKGQVS
Trigger: ACTCACTTGTCCCTTGTCAGTGCTCCTGAAGTAGAGGACGACTCACTGGAACGCAAGCGCCTCACCCGAATCTCTGACCCAGAGAAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS GCA 90 bp AACCCTCCTGCGGGTCTTTCTTGGCAGCATTACGGAAGAACCCACTaGAGATGGCCTTCTGCACTCGGACTGTGGACTTGCCACAGGAAA +
Preference number: 5 (lower is better)
Translates to: NPPAGLSWQHYGRTH*RWPSALGLWTCHRK
Trigger: TTTCCTGTGGCAAGTCCACAGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCCGTAATGCTGCCAAGAAAGACCCGCAGGAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000589898.1
ENST00000650571.1
CDS GCA 90 bp ATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGGCTACTaGTGCTGGAGAGGCAAAGGAACAATCTTGCCTTTCAGCGCCGTC +
Preference number: 5 (lower is better)
Translates to: ILRTSLSSISPSPGY*CWRGKGTILPFSAV
Trigger: GACGGCGCTGAAAGGCAAGATTGTTCCTTTGCCTCTCCAGCAGCAGTAGCCAGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS CCA 90 bp CTGGTCTTGGTCCCAGTGAAGGACAGCACTTTGACTTTGACCCTCTaGCCTTTGCTCACGACATCAGCTACATTGGCCACACGACCCTCC +
Preference number: 5 (lower is better)
Translates to: LVLVPVKDSTLTLTL*PLLTTSATLATRPS
Trigger: GGAGGGTCGTGTGGCCAATGTAGCTGATGTCGTGAGCAAAGGCCAGAGGGTCAAAGTCAAAGTGCTGTCCTTCACTGGGACCAAGACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 90 bp TTCATCTCGGTAGGCACGTTCTGTGTACAACCTGTAACACTTCCCTaGGCCTGTTCTCCCAGCTCTGCCAGCTCGTTGCTTTGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: FISVGTFCVQPVTLP*ACSPSSASSLLCLS
Trigger: GCTCAGGCAAAGCAACGAGCTGGCAGAGCTGGGAGAACAGGCCCAGGGAAGTGTTACAGGTTGTACACAGAACGTGCCTACCGAGATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 90 bp AGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGGCTACTGCTGCTaGAGAGGCAAAGGAACAATCTTGCCTTTCAGCGCCGTCGGAAAG +
Preference number: 5 (lower is better)
Translates to: RTSLSSISPSPGYCC*RGKGTILPFSAVGK
Trigger: CTTTCCGACGGCGCTGAAAGGCAAGATTGTTCCTTTGCCTCTCCAGCAGCAGTAGCCAGGGCTTGGACTTATCGATGACAGGCTGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CAA 90 bp GCCCTGCAGCACAGATACTGGCAGCACAAACCAGCTGAGAGGAGAGGTGTTATGAGAAGGGTTGTCCGGTaGGCAAAGGACTGGGAAGAG +
Preference number: 5 (lower is better)
Translates to: ALQHRYWQHKPAERRGVMRRVVR*AKDWEE
Trigger: CTCTTCCCAGTCCTTTGCCAACCGGACAACCCTTCT...CATAACACCTCTCCTCTCAGCTGGTTTGTGCTGCCAGTATCTGTGCTGCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp CTCAGACAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCTTCCGCTCTCCATATTaGTCCCGGTCCTTCCGGTCT +
Preference number: 5 (lower is better)
Translates to: LRQNQEALSLMKGQGSAAFRSPY*SRSFRS
Trigger: AGACCGGAAGGACCGGGACAAATATGGAGAGCGGAA...GGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTGTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp AGTAGAGGTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTTGACCCTCTGGCCTTaGCTCACGACATCAGCTACA +
Preference number: 5 (lower is better)
Translates to: SRGPMSLHKMLTHSTFPSLTLWP*LTTSAT
Trigger: TGTAGCTGATGTCGTGAGCAAAGGCCAGAGGGTCAA...GGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGACCTCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp AAGGCTGGAAGTCTGGGTTGTACGTCGTTTCCGAGCGCAAAGAGGCCCTGCGTTGTGAAGGACAGCACTTaGACTTTGACCCTCTGGCCT +
Preference number: 5 (lower is better)
Translates to: KAGSLGCTSFPSAKRPCVVKDST*TLTLWP
Trigger: AGGCCAGAGGGTCAAAGTCAAAGTGCTGTCCTTCAC...AACGCAGGGCCTCTTTGCGCTCGGAAACGACGTACAACCCAGACTTCCAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp AGCTGTGAGGAGGGCACAAGGAGGTGGCTATTCTCCAAGCAAGTGCTAGGAAAACTGCATCATTGCTGCTaGGGAGAGGGAGCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: SCEEGTRRWLFSKQVLGKLHHCC*GEGAVW
Trigger: CCAGACGGCTCCCTCTCCCAAGCAGCAATGATGCAG...TTTTCCTAGCACTTGCTTGGAGAATAGCCACCTCCTTGTGCCCTCCTCACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp GACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGGCTACAGTTCCCGCCTTTCTTaGGCCAAGGCACTCTGCATC +
Preference number: 5 (lower is better)
Translates to: DSCILRTSLSSISPSPGYSSRLS*AKALCI
Trigger: GATGCAGAGTGCCTTGGCCAAAGAAAGGCGGGAACT...GTAGCCAGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CAA 90 bp GTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTGGGTCAACCCAGTGTTaGTTGAGTCCCATGGGAATA +
Preference number: 5 (lower is better)
Translates to: VPCPCTRCSPTPPSHPGAGSTQC*LSPMGI
Trigger: TATTCCCATGGGACTCAACAAACACTGGGTTGACCC...AGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp CGGGCAGCTGGTCCGACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGCCAATACCCCTCATGTaGGCAGCAATCTGTCTGCCT +
Preference number: 5 (lower is better)
Translates to: RAAGPTQGGNLFSDFSLQPIPLM*AAICLP
Trigger: AGGCAGACAGATTGCTGCCAACATGAGGGGTATTGG...CTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGTCGGACCAGCTGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp GTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCTGGAGCTGCATTTTGCATAGCATaGGCTCCAGAGGGAACTCTG +
Preference number: 5 (lower is better)
Translates to: VPCPCTRCSPTPPSHPGAAFCIA*APEGTL
Trigger: CAGAGTTCCCTCTGGAGCCAATGCTATGCAAAATGC...AGCTCCAGGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp CCTGGTTGGATTCTTCAGTGCGTTTTGGTGGGGCCTGAGGGTGTCGCTGGTGGGGGGTTGGAGAACTTGTaGTTCTTCCAGGAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: PGWILQCVLVGPEGVAGGGLENL*FFQELY
Trigger: GTACAACTCCTGGAAGAACAACAAGTTCTCCAACCC...CCCACCAGCGACACCCTCAGGCCCCACCAAAACGCACTGAAGAATCCAACCAGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR CAA 90 bp ATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTATGCCTAACATCTGCTaGCGAATGTCCTGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: IGGNPEGRVHTRRERELAMPNIC*RMSWAR
Trigger: CCGGGCCCAGGACATTCGCAAGCAGATGTTAGGCAT...AGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp CCGTGGCTGGGTCTGATGGGGAAGTGGTGTGTTCAGGAGGTTTCCTGGTTGGATTCCTGCGGGTCTTTCTaGGCAGCATTACGGAAGAAC +
Preference number: 5 (lower is better)
Translates to: PWLGLMGKWCVQEVSWLDSCGSF*AALRKN
Trigger: GTTCTTCCGTAATGCTGCCAAGAAAGACCCGCAGGA...ATCCAACCAGGAAACCTCCTGAACACACCACTTCCCCATCAGACCCAGCCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR CAA 90 bp CGGGCAGCTGGTCCGACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGTCACGCATGTATTCCTaGGTGGTGAGCACCAGCTCA +
Preference number: 5 (lower is better)
Translates to: RAAGPTQGGNLFSDFSLQSRMYS*VVSTSS
Trigger: TGAGCTGGTGCTCACCACCAAGGAATACATGCGTGA...CTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGTCGGACCAGCTGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp CTCAGACAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCGTTGGGTCTGAGACCTaGAAGAAGGCTGGGGCAAAC +
Preference number: 5 (lower is better)
Translates to: LRQNQEALSLMKGQGSAAVGSET*KKAGAN
Trigger: GTTTGCCCCAGCCTTCTTCAAGGTCTCAGACCCAAC...GGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTGTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp GGAGGTGGGTGCCCAGTCCCCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTAGGAGGCTGCAGGCTCTaGCCAAAGCCAGGTTTAAAT +
Preference number: 5 (lower is better)
Translates to: GGGCPVPVSPLVSFEVPVGGCRL*PKPGLN
Trigger: ATTTAAACCTGGCTTTGGCAAGAGCCTGCAGCCTCC...TACAGGGACCTCAAATGAAACCAAAGGGGAAACGGGGACTGGGCACCCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS TCA 90 bp CCGATATCTAGACTTCACTTTATTCCTCTCCCGGGTCCTGGAACGTaGTCGAGAGCGGGATCGGTGTCTCCGCTTGTGGTCTCTATCTCG +
Preference number: 5 (lower is better)
Translates to: PISRLHFIPLPGPGT*SRAGSVSPLVVSIS
Trigger: CGAGATAGAGACCACAAGCGGAGACACCGATCCCGCTCTCGATCACGTTCCAGGACCCGGGAGAGGAATAAAGTGAAGTCTAGATATCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS GCA 90 bp AGGCACTGCTCCAATGAGACAGCTACAGCAACCACAGGGAGGAAGTaGTTTGGGCATTCTGGCTGTCTGTTGAAGAGGGCACTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: RHCSNETATATTGRK*FGHSGCLLKRALEG
Trigger: TCCTTCCAGTGCCCTCTTCAACAGACAGCCAGAATGCCCAAAGCACTTCCTCCCTGTGGTTGCTGTAGCTGTCTCATTGGAGCAGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540306.5
ENST00000587044.1
CDS GCA 90 bp CAGCCCTCCTACCCATCCAGAAACTTGAGCCTGGTCCGGAGTGAGTaGTGGAGTCCAGGAAGTGCTATGGAAGCAGCTGTGAATCAGTTA +
Preference number: 5 (lower is better)
Translates to: QPSYPSRNLSLVRSE*WSPGSAMEAAVNQL
Trigger: TAACTGATTCACAGCTGCTTCCATAGCACTTCCTGGACTCCAGCACTCACTCCGGACCAGGCTCAAGTTTCTGGATGGGTAGGAGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588996.1
CDS CCA 90 bp CCTGCGGGTCTTTCTTGGCAGCATTACGGAAGAACCCACTGCAGATaGCCTTCTGCACTCGGACTGTGGACTTGCCACAGGAAACAACAT +
Preference number: 5 (lower is better)
Translates to: PAGLSWQHYGRTHCR*PSALGLWTCHRKQH
Trigger: ATGTTGTTTCCTGTGGCAAGTCCACAGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCCGTAATGCTGCCAAGAAAGACCCGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000589898.1
ENST00000650571.1
CDS-3UTR CAA 90 bp TCATCCAACATGGTCCGAACAGAAGGGTTGTCCGGTTGGCAAAGGACTGGGAAGAGCCATGGCTATAGCTaGCCCAGAACCTCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: SSNMVRTEGLSGWQRTGKSHGYS*PRTSFL
Trigger: GAGGAAGGAGGTTCTGGGCAAGCTATAGCCATGGCT...CTTCCCAGTCCTTTGCCAACCGGACAACCCTTCTGTTCGGACCATGTTGGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592258.5
CDS-3UTR CAA 90 bp GAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAAGAAGGGTTGTCCGGTaGGCAAAGGACTGGGAAGAG +
Preference number: 5 (lower is better)
Translates to: EGRVHTRRERELAEKQHPRRVVR*AKDWEE
Trigger: CTCTTCCCAGTCCTTTGCCAACCGGACAACCCTTCT...TGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp CCGAACAGAAGGGTTGTCCGGTTGGCAAAGGACTGGGAAGAGTTCCTTCAGCTTAGAAGGGTTGTCCGGTaGGCAAAGGACTGGGAAGAG +
Preference number: 5 (lower is better)
Translates to: PNRRVVRLAKDWEEFLQLRRVVR*AKDWEE
Trigger: CTCTTCCCAGTCCTTTGCCAACCGGACAACCCTTCT...AAGCTGAAGGAACTCTTCCCAGTCCTTTGCCAACCGGACAACCCTTCTGTTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592258.5
CDS-3UTR CAA 90 bp GCAAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGGTCCGAACAGAAGGGTaGTCCGGTTGGCAAAGGACT +
Preference number: 5 (lower is better)
Translates to: AKRPCVLVSGDSGDSHHVVRTEG*SGWQRT
Trigger: AGTCCTTTGCCAACCGGACAACCCTTCTGTTCGGAC...CACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp CCGAACAGAAGGGTTGTCCGGTTGGCAAAGGACTGGGAAGAGTTCCTTCAGCTTGTCCGAACAGAAGGGTaGTCCGGTTGGCAAAGGACT +
Preference number: 5 (lower is better)
Translates to: PNRRVVRLAKDWEEFLQLVRTEG*SGWQRT
Trigger: AGTCCTTTGCCAACCGGACAACCCTTCTGTTCGGAC...AAGCTGAAGGAACTCTTCCCAGTCCTTTGCCAACCGGACAACCCTTCTGTTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592258.5
CDS-3UTR CAA 90 bp CAGGAGAAGCAGCAACGTAACAGGATGTGCCCAATCTCTCAGAAGCTTCTCTACACGACATCAGCTACATaGGCCACACGACCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: QEKQQRNRMCPISQKLLYTTSAT*ATRPSR
Trigger: GCGGGAGGGTCGTGTGGCCAATGTAGCTGATGTCGT...GTAGAGAAGCTTCTGAGAGATTGGGCACATCCTGTTACGTTGCTGCTTCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp AGTAGAGGTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCGCAGCAATCATCTGTTaGATCTCCCACTTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: SRGPMSLHKMLTHSTFPSAAIIC*ISHFSG
Trigger: CCCAGAGAAGTGGGAGATCAAACAGATGATTGCTGC...GGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGACCTCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp GTAACAGCTAAGCAGAGAGGAGTCAGGAAGCACGGAGAAGACTCTTGGGGCTGGGCTCATGTCCATGCTTaGCTTAGTGTGCCCTCTCAG +
Preference number: 5 (lower is better)
Translates to: VTAKQRGVRKHGEDSWGWAHVHA*LSVPSQ
Trigger: CTGAGAGGGCACACTAAGCAAAGCATGGACATGAGC...CCAGCCCCAAGAGTCTTCTCCGTGCTTCCTGACTCCTCTCTGCTTAGCTGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp CGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCAAGGCACTCTGCATCATaGCTGCTTGGGAGAGGGAGC +
Preference number: 5 (lower is better)
Translates to: RRERELAEKQHPGKERSPRHSAS*LLGRGS
Trigger: GCTCCCTCTCCCAAGCAGCAATGATGCAGAGTGCCT...TGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCAGTTCCCGCCTTTCTTaGGCCAAGGCACTCTGCATC +
Preference number: 5 (lower is better)
Translates to: AEKQHPGKERSPQAEMMASSRLS*AKALCI
Trigger: GATGCAGAGTGCCTTGGCCAAAGAAAGGCGGGAACT...GGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GGTGTAAAAATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGTCCCGCTGGGCCTGTTaGAGTTCCCGCCTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: GVKIGGNPEGRVHTRRERSRWAC*SSRLSL
Trigger: CAAAGAAAGGCGGGAACTCAAACAGGCCCAGCGGGA...CCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGATTTTTACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp AAGGCTGGAAGTCTGGGTTGTACGTCGTTTCCGAGCGCAAAGAGGCCCTGCGTTGGGTCAACCCAGTGTTaGTTGAGTCCCATGGGAATA +
Preference number: 5 (lower is better)
Translates to: KAGSLGCTSFPSAKRPCVGSTQC*LSPMGI
Trigger: TATTCCCATGGGACTCAACAAACACTGGGTTGACCC...AACGCAGGGCCTCTTTGCGCTCGGAAACGACGTACAACCCAGACTTCCAGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp CAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCAGCAGACCAATACCCCTCATGTaGGCAGCAATCTGTCTGCCT +
Preference number: 5 (lower is better)
Translates to: QNQEALSLMKGQGSAASRPIPLM*AAICLP
Trigger: AGGCAGACAGATTGCTGCCAACATGAGGGGTATTGG...TCTGCTGGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp GAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCATCCTCTGACACTCTTTaGGCCACCGACATAGCTGCC +
Preference number: 5 (lower is better)
Translates to: EGRVHTRRERELAEKQHPSSDTL*ATDIAA
Trigger: GGCAGCTATGTCGGTGGCCAAAAGAGTGTCAGAGGA...TGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp CGGGCAGCTGGTCCGACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGGCACATCAGTGTGAATaGTCCTCTCATGTGCCTCGT +
Preference number: 5 (lower is better)
Translates to: RAAGPTQGGNLFSDFSLQAHQCE*SSHVPR
Trigger: ACGAGGCACATGAGAGGACAATTCACACTGATGTGC...CTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGTCGGACCAGCTGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp CGGGCAGCTGGTCCGACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGTGGATTTCCGGCACGTaGGTGGTCAGCATTTCATCT +
Preference number: 5 (lower is better)
Translates to: RAAGPTQGGNLFSDFSLQWISGT*VVSISS
Trigger: AGATGAAATGCTGACCACCAACGTGCCGGAAATCCA...CTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGTCGGACCAGCTGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp AGTAGAGGTCCCATGTCCCTGCACAAGATGCTCACCCACTCCACCTTCCCATCCGTGACAGCACTGTGCTaGCTAAGTTGGTTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: SRGPMSLHKMLTHSTFPSVTALC*LSWFSG
Trigger: TCCAGAGAACCAACTTAGCAAGCACAGTGCTGTCAC...GGATGGGAAGGTGGAGTGGGTGAGCATCTTGTGCAGGGACATGGGACCTCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp AAGGCTGGAAGTCTGGGTTGTACGTCGTTTCCGAGCGCAAAGAGGCCCTGCGTTGCATTTTGCATAGCATaGGCTCCAGAGGGAACTCTG +
Preference number: 5 (lower is better)
Translates to: KAGSLGCTSFPSAKRPCVAFCIA*APEGTL
Trigger: CAGAGTTCCCTCTGGAGCCAATGCTATGCAAAATGC...AACGCAGGGCCTCTTTGCGCTCGGAAACGACGTACAACCCAGACTTCCAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp CCAGCTTTCCGTAAGTTCCGAAACCTGGCCTGGCAAGACCTGCCTGATGTTCCGTTGTTCTTCCAGGAGTaGTACACAGCTAGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: PAFRKFRNLAWQDLPDVPLFFQE*YTASRV
Trigger: CACCCTGCTAGCTGTGTACAACTCCTGGAAGAACAA...CGGAACATCAGGCAGGTCTTGCCAGGCCAGGTTTCGGAACTTACGGAAAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp AGCTGTGAGGAGGGCACAAGGAGGTGGCTATTCTCCAAGCAAGTGCTAGGAAAAATGCCTAACATCTGCTaGCGAATGTCCTGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: SCEEGTRRWLFSKQVLGKMPNIC*RMSWAR
Trigger: CCGGGCCCAGGACATTCGCAAGCAGATGTTAGGCAT...TTTTCCTAGCACTTGCTTGGAGAATAGCCACCTCCTTGTGCCCTCCTCACAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp CTAATAGCAAGTGTTCCTCCCTCTTCCATCCCGCTTGAATACCTCTGCCTCCAGATGCCTAACATCTGCTaGCGAATGTCCTGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: LIASVPPSSIPLEYLCLQMPNIC*RMSWAR
Trigger: CCGGGCCCAGGACATTCGCAAGCAGATGTTAGGCAT...CTGGAGGCAGAGGTATTCAAGCGGGATGGAAGAGGGAGGAACACTTGCTATTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR CAA 90 bp CCTGGTTGGATTCTTCAGTGCGTTTTGGTGGGGCCTGAGGGTGTCGCTGGTGGGGAAACAACATCCAGCTaGTGTCTGTCCATTATGCCT +
Preference number: 5 (lower is better)
Translates to: PGWILQCVLVGPEGVAGGETTSS*CLSIMP
Trigger: AGGCATAATGGACAGACACAAGCTGGATGTTGTTTC...CCCACCAGCGACACCCTCAGGCCCCACCAAAACGCACTGAAGAATCCAACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR CAA 90 bp CAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCAGCAGACATTCTGGCTGTCTGTaGAAGAGGGCACTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: QNQEALSLMKGQGSAASRHSGCL*KRALEG
Trigger: TCCTTCCAGTGCCCTCTTCAACAGACAGCCAGAATG...TCTGCTGGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp GTGGCTGGGTCTGATGGGGAAGTGGTGTGTTCAGGAGGTTTCCTGGTTGGATTCCATTCTGGCTGTCTGTaGAAGAGGGCACTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: VAGSDGEVVCSGGFLVGFHSGCL*KRALEG
Trigger: TCCTTCCAGTGCCCTCTTCAACAGACAGCCAGAATG...GAATCCAACCAGGAAACCTCCTGAACACACCACTTCCCCATCAGACCCAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR CAA 90 bp GACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGGCTACCATTCTGGCTGTCTGTaGAAGAGGGCACTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: DSCILRTSLSSISPSPGYHSGCL*KRALEG
Trigger: TCCTTCCAGTGCCCTCTTCAACAGACAGCCAGAATG...GTAGCCAGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CAA 90 bp CGCAAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGGCAAAGGAACAATCTaGCCTTTCAGCGCCGTCGGA +
Preference number: 5 (lower is better)
Translates to: RKEALRSGFRGFRGFSSCGKGTI*PFSAVG
Trigger: TCCGACGGCGCTGAAAGGCAAGATTGTTCCTTTGCC...ACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS CCA 90 bp AGTTCCCGCCTTTCTTTGGCCAAGGCACTCTGCATCATTGCTGCTTaGGAGAGGGAGCCGTCTGGGTTCTTGACAATTTTAATGGGGCTC +
Preference number: 5 (lower is better)
Translates to: SSRLSLAKALCIIAA*EREPSGFLTILMGL
Trigger: GAGCCCCATTAAAATTGTCAAGAACCCAGACGGCTCCCTCTCCCAAGCAGCAATGATGCAGAGTGCCTTGGCCAAAGAAAGGCGGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 90 bp TGTTTGTTGAGTCCCATGGGAATAGAATCCATCTCAGCTTCCCGCTaGGCCTGTTTGAGTTCCCGCCTTTCTTTGGCCAAGGCACTCTGC +
Preference number: 5 (lower is better)
Translates to: CLLSPMGIESISASR*ACLSSRLSLAKALC
Trigger: GCAGAGTGCCTTGGCCAAAGAAAGGCGGGAACTCAAACAGGCCCAGCGGGAAGCTGAGATGGATTCTATTCCCATGGGACTCAACAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 90 bp TCCACTCAGGAATATCATTGGGCATCATCCCAATACCCCTCATGTTaGCAGCAATCTGTCTGCCTTCCGCATCAGGCAGAGGGTCAACCC +
Preference number: 5 (lower is better)
Translates to: STQEYHWASSQYPSC*QQSVCLPHQAEGQP
Trigger: GGGTTGACCCTCTGCCTGATGCGGAAGGCAGACAGATTGCTGCCAACATGAGGGGTATTGGGATGATGCCCAATGATATTCCTGAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 90 bp CAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTaGCTACTGCTGCTGGAGAGGCAAAGGAACAATCTTGCCTTTCAG +
Preference number: 5 (lower is better)
Translates to: QLYPQDQPVIDKSKP*LLLLERQRNNLAFQ
Trigger: CTGAAAGGCAAGATTGTTCCTTTGCCTCTCCAGCAGCAGTAGCCAGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CAA 90 bp CTTCATCCAACATGGTCCGAACAGAAGGGTTGTCCGGTTGGCAAAGGACTGGGATGGAGGCCGCATGGTTaGTATGAGACGCAGCAAGTT +
Preference number: 5 (lower is better)
Translates to: LHPTWSEQKGCPVGKGLGWRPHG*YETQQV
Trigger: AACTTGCTGCGTCTCATACAAACCATGCGGCCTCCA...TCCCAGTCCTTTGCCAACCGGACAACCCTTCTGTTCGGACCATGTTGGATGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592258.5
CDS-3UTR CAA 90 bp GGTGTAAAAATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGTCCGAACAGAAGGGTaGTCCGGTTGGCAAAGGACT +
Preference number: 5 (lower is better)
Translates to: GVKIGGNPEGRVHTRRERVRTEG*SGWQRT
Trigger: AGTCCTTTGCCAACCGGACAACCCTTCTGTTCGGAC...CCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGATTTTTACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GCAAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGTCCGCTTCTTCTTCTTaGTCCTGTCCCGGTGTTCAG +
Preference number: 5 (lower is better)
Translates to: AKRPCVLVSGDSGDSHHVSASSS*SCPGVQ
Trigger: CTGAACACCGGGACAGGACAAAGAAGAAGAAGCGGA...CACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp GGTGTAAAAATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGTTCCGCTCTCCATATTaGTCCCGGTCCTTCCGGTCT +
Preference number: 5 (lower is better)
Translates to: GVKIGGNPEGRVHTRRERFRSPY*SRSFRS
Trigger: AGACCGGAAGGACCGGGACAAATATGGAGAGCGGAA...CCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGATTTTTACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp CCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTACTGTCTCTCCCCAGAAGGCTTGACCCTCTGGCCTTaGCTCACGACATCAGCTACA +
Preference number: 5 (lower is better)
Translates to: PFPLWFHLRSLYCLSPEGLTLWP*LTTSAT
Trigger: TGTAGCTGATGTCGTGAGCAAAGGCCAGAGGGTCAA...GCCTTCTGGGGAGAGACAGTACAGGGACCTCAAATGAAACCAAAGGGGAAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp CGCAAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGACAGCACTTTGACTTaGACCCTCTGGCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: RKEALRSGFRGFRGFSSCDSTLT*TLWPLL
Trigger: GAGCAAAGGCCAGAGGGTCAAAGTCAAAGTGCTGTC...ACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp GGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTGACAGCACTTTGACTTaGACCCTCTGGCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: GKERSPQAEMMALCPLNCDSTLT*TLWPLL
Trigger: GAGCAAAGGCCAGAGGGTCAAAGTCAAAGTGCTGTC...ACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAATGCTCAGGCTGGTCTaGGTCCCAGTGAAGGACAGC +
Preference number: 5 (lower is better)
Translates to: VHTRRERELAEKQHPGKEMLRLV*VPVKDS
Trigger: GCTGTCCTTCACTGGGACCAAGACCAGCCTGAGCAT...TTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp CGGGCAGCTGGTCCGACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGATTGAGGTCTCCTCATaGGTCTCCCCGACAAGATTT +
Preference number: 5 (lower is better)
Translates to: RAAGPTQGGNLFSDFSLQIEVSS*VSPTRF
Trigger: AAATCTTGTCGGGGAGACCAATGAGGAGACCTCAAT...CTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGTCGGACCAGCTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp GGAGGTGGGTGCCCAGTCCCCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTATATCAGGATTCCGCATaGAGGTCTCCTCATTGGTCT +
Preference number: 5 (lower is better)
Translates to: GGGCPVPVSPLVSFEVPVYQDSA*RSPHWS
Trigger: AGACCAATGAGGAGACCTCAATGCGGAATCCTGATA...TACAGGGACCTCAAATGAAACCAAAGGGGAAACGGGGACTGGGCACCCACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp CCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTACTGTCTCTCCCCAGAAGGCGCTCATGTCCATGCTTaGCTTAGTGTGCCCTCTCAG +
Preference number: 5 (lower is better)
Translates to: PFPLWFHLRSLYCLSPEGAHVHA*LSVPSQ
Trigger: CTGAGAGGGCACACTAAGCAAAGCATGGACATGAGC...GCCTTCTGGGGAGAGACAGTACAGGGACCTCAAATGAAACCAAAGGGGAAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp GGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTGCTCATGTCCATGCTTaGCTTAGTGTGCCCTCTCAG +
Preference number: 5 (lower is better)
Translates to: GKERSPQAEMMALCPLNCAHVHA*LSVPSQ
Trigger: CTGAGAGGGCACACTAAGCAAAGCATGGACATGAGC...ACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp CTCAGACAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCTGGATTTCCGGCACGTaGGTGGTCAGCATTTCATCT +
Preference number: 5 (lower is better)
Translates to: LRQNQEALSLMKGQGSAAWISGT*VVSISS
Trigger: AGATGAAATGCTGACCACCAACGTGCCGGAAATCCA...GGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTGTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp GCCCTGCAGCACAGATACTGGCAGCACAAACCAGCTGAGAGGAGAGGTGTTATGACTGTGCTTGCTAAGTaGGTTCTCTGGATTTCCGGC +
Preference number: 5 (lower is better)
Translates to: ALQHRYWQHKPAERRGVMTVLAK*VLWISG
Trigger: GCCGGAAATCCAGAGAACCAACTTAGCAAGCACAGT...CATAACACCTCTCCTCTCAGCTGGTTTGTGCTGCCAGTATCTGTGCTGCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTTTGATACCCATGGCCTaGAGTGACAGCACTGTGCTT +
Preference number: 5 (lower is better)
Translates to: SRDSCILRTSLSSISPSPLIPMA*SDSTVL
Trigger: AAGCACAGTGCTGTCACTCAAGGCCATGGGTATCAA...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CAA 90 bp AGGTTTCCTGGTTGGATTCTTCAGTGCGTTTTGGTGGGGCCTGAGGGTGTCGCTTTGTTCTTCCAGGAGTaGTACACAGCTAGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: RFPGWILQCVLVGPEGVALFFQE*YTASRV
Trigger: CACCCTGCTAGCTGTGTACAACTCCTGGAAGAACAA...AGCGACACCCTCAGGCCCCACCAAAACGCACTGAAGAATCCAACCAGGAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR CAA 90 bp CCAGCTTTCCGTAAGTTCCGAAACCTGGCCTGGCAAGACCTGCCTGATGTTCCGGGGTTGGAGAACTTGTaGTTCTTCCAGGAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: PAFRKFRNLAWQDLPDVPGLENL*FFQELY
Trigger: GTACAACTCCTGGAAGAACAACAAGTTCTCCAACCC...CGGAACATCAGGCAGGTCTTGCCAGGCCAGGTTTCGGAACTTACGGAAAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp GCAAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGTCCTGCGGGTCTTTCTaGGCAGCATTACGGAAGAAC +
Preference number: 5 (lower is better)
Translates to: AKRPCVLVSGDSGDSHHVSCGSF*AALRKN
Trigger: GTTCTTCCGTAATGCTGCCAAGAAAGACCCGCAGGA...CACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp GCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCATTCTGGCTGTCTGTaGAAGAGGGCACTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: AEKQHPGKERSPQAEMMAHSGCL*KRALEG
Trigger: TCCTTCCAGTGCCCTCTTCAACAGACAGCCAGAATG...GGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540306.5
ENST00000587574.1
CDS-3UTR CAA 90 bp CTCCTGCTAGCTGGGGCATCAGGGCACTCACCATGTCCCTGCACAAGATGCTCAGTCCCTTTCTTGAAGTaGATGCAATGTGTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: LLLAGASGHSPCPCTRCSVPFLK*MQCVSV
Trigger: CACAGAGACACATTGCATCAACTTCAAGAAAGGGAC...TGAGCATCTTGTGCAGGGACATGGTGAGTGCCCTGATGCCCCAGCTAGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp CTCCTGCTAGCTGGGGCATCAGGGCACTCACCATGTCCCTGCACAAGATGCTCACGGACTCTTTCTGAATaGTCTTTAGGGTGTGGTTTG +
Preference number: 5 (lower is better)
Translates to: LLLAGASGHSPCPCTRCSRTLSE*SLGCGL
Trigger: CAAACCACACCCTAAAGACAATTCAGAAAGAGTCCG...TGAGCATCTTGTGCAGGGACATGGTGAGTGCCCTGATGCCCCAGCTAGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS GCA 90 bp GGAAGAACCCACTGCAGATGGCCTTCTGCACTCGGACTGTGGACTTaGCACAGGAAACAACATCCAGCTTGTGTCTGTCCATTATGCCTA +
Preference number: 5 (lower is better)
Translates to: GRTHCRWPSALGLWT*HRKQHPACVCPLCL
Trigger: TAGGCATAATGGACAGACACAAGCTGGATGTTGTTTCCTGTGGCAAGTCCACAGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000589898.1
ENST00000650571.1
CDS GCA 90 bp TCTTTCTTGGCAGCATTACGGAAGAACCCACTGCAGATGGCCTTCTaGACTCGGACTGTGGACTTGCCACAGGAAACAACATCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: SFLAALRKNPLQMAF*TRTVDLPQETTSSL
Trigger: CAAGCTGGATGTTGTTTCCTGTGGCAAGTCCACAGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCCGTAATGCTGCCAAGAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000589898.1
ENST00000650571.1
CDS CCA 90 bp TTGCCTTTCAGCGCCGTCGGAAAGCTCGAGATATTCTCCAGGCATTaGGTTCCTCATAGCGGTTGTACAAGGGTTCAAGACGCTGTTGCT +
Preference number: 5 (lower is better)
Translates to: LPFSAVGKLEIFSRH*VPHSGCTRVQDAVA
Trigger: AGCAACAGCGTCTTGAACCCTTGTACAACCGCTATGAGGAACCCAATGCCTGGAGAATATCTCGAGCTTTCCGACGGCGCTGAAAGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CAA 90 bp GAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGAGCCATGGCTATAGCTaGCCCAGAACCTCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: ELAEKQHPGKERSPQAEMSHGYS*PRTSFL
Trigger: GAGGAAGGAGGTTCTGGGCAAGCTATAGCCATGGCT...CATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp AAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGTGTGGAGGCCGCATGGTTaGTATGAGACGCAGCAAGTT +
Preference number: 5 (lower is better)
Translates to: KEALRSGFRGFRGFSSCVWRPHG*YETQQV
Trigger: AACTTGCTGCGTCTCATACAAACCATGCGGCCTCCA...CACACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp CGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCATCCGCTTCTTCTTCTTaGTCCTGTCCCGGTGTTCAG +
Preference number: 5 (lower is better)
Translates to: RRERELAEKQHPGKERSPSASSS*SCPGVQ
Trigger: CTGAACACCGGGACAGGACAAAGAAGAAGAAGCGGA...TGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp ACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGCTCAGGTACCAGACATTCCGCTCTCCATATTaGTCCCGGTCCTTCCGGTCT +
Preference number: 5 (lower is better)
Translates to: TQGGNLFSDFSLQLRYQTFRSPY*SRSFRS
Trigger: AGACCGGAAGGACCGGGACAAATATGGAGAGCGGAA...TGTCTGGTACCTGAGCTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp CGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCATTGACCCTCTGGCCTTaGCTCACGACATCAGCTACA +
Preference number: 5 (lower is better)
Translates to: RRERELAEKQHPGKERSPLTLWP*LTTSAT
Trigger: TGTAGCTGATGTCGTGAGCAAAGGCCAGAGGGTCAA...TGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GGTGTAAAAATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGTGAAGGACAGCACTTaGACTTTGACCCTCTGGCCT +
Preference number: 5 (lower is better)
Translates to: GVKIGGNPEGRVHTRRERVKDST*TLTLWP
Trigger: AGGCCAGAGGGTCAAAGTCAAAGTGCTGTCCTTCAC...CCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGATTTTTACACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GCCCTGCAGCACAGATACTGGCAGCACAAACCAGCTGAGAGGAGAGGTGTTATGATTGAGGTCTCCTCATaGGTCTCCCCGACAAGATTT +
Preference number: 5 (lower is better)
Translates to: ALQHRYWQHKPAERRGVMIEVSS*VSPTRF
Trigger: AAATCTTGTCGGGGAGACCAATGAGGAGACCTCAAT...CATAACACCTCTCCTCTCAGCTGGTTTGTGCTGCCAGTATCTGTGCTGCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp TCACGGGACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTTATCAGGATTCCGCATaGAGGTCTCCTCATTGGTCT +
Preference number: 5 (lower is better)
Translates to: SRDSCILRTSLSSISPSPYQDSA*RSPHWS
Trigger: AGACCAATGAGGAGACCTCAATGCGGAATCCTGATA...AGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTCCCGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CAA 90 bp GAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCGAGCCGTCTGGGTTCTaGACAATTTTAATGGGGCTC +
Preference number: 5 (lower is better)
Translates to: EKQHPGKERSPQAEMMALEPSGF*TILMGL
Trigger: GAGCCCCATTAAAATTGTCAAGAACCCAGACGGCTC...GAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp AGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACCTGTCCCGCTGGGCCTGTTaGAGTTCCCGCCTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: SFSTSTTSRPAFRKFRNLSRWAC*SSRLSL
Trigger: CAAAGAAAGGCGGGAACTCAAACAGGCCCAGCGGGA...CAGGTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp AACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGGGGTCAACCCAGTGTTaGTTGAGTCCCATGGGAATA +
Preference number: 5 (lower is better)
Translates to: NPEGRVHTRRERELAEKQGSTQC*LSPMGI
Trigger: TATTCCCATGGGACTCAACAAACACTGGGTTGACCC...CTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCGACGGCCTGGACCAATaGCTCCTTCAGTTTGTAGAT +
Preference number: 5 (lower is better)
Translates to: AEKQHPGKERSPQAEMMADGLDQ*LLQFVD
Trigger: ATCTACAAACTGAAGGAGCAATTGGTCCAGGCCGTC...GGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCTGGATTTCCGGCACGTaGGTGGTCAGCATTTCATCT +
Preference number: 5 (lower is better)
Translates to: AEKQHPGKERSPQAEMMAWISGT*VVSISS
Trigger: AGATGAAATGCTGACCACCAACGTGCCGGAAATCCA...GGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCACTGTGCTTGCTAAGTaGGTTCTCTGGATTTCCGGC +
Preference number: 5 (lower is better)
Translates to: AEKQHPGKERSPQAEMMATVLAK*VLWISG
Trigger: GCCGGAAATCCAGAGAACCAACTTAGCAAGCACAGT...GGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp CGCAAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGTGACAGCACTGTGCTaGCTAAGTTGGTTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: RKEALRSGFRGFRGFSSCVTALC*LSWFSG
Trigger: TCCAGAGAACCAACTTAGCAAGCACAGTGCTGTCAC...ACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp GCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCGTGACAGCACTGTGCTaGCTAAGTTGGTTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: AEKQHPGKERSPQAEMMAVTALC*LSWFSG
Trigger: TCCAGAGAACCAACTTAGCAAGCACAGTGCTGTCAC...GGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTTTGTTCTTCCAGGAGTaGTACACAGCTAGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: GKERSPQAEMMALCPLNCLFFQE*YTASRV
Trigger: CACCCTGCTAGCTGTGTACAACTCCTGGAAGAACAA...ACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GGTGTAAAAATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGTCCTGCGGGTCTTTCTaGGCAGCATTACGGAAGAAC +
Preference number: 5 (lower is better)
Translates to: GVKIGGNPEGRVHTRRERSCGSF*AALRKN
Trigger: GTTCTTCCGTAATGCTGCCAAGAAAGACCCGCAGGA...CCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGATTTTTACACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp AGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGCATTCTGGCTGTCTGTaGAAGAGGGCACTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: RELAEKQHPGKERSPQAEHSGCL*KRALEG
Trigger: TCCTTCCAGTGCCCTCTTCAACAGACAGCCAGAATG...CTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540306.5
ENST00000587574.1
CDS-3UTR CAA 90 bp ACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGCTCAGGTACCAGACAGGCAAAGGAACAATCTaGCCTTTCAGCGCCGTCGGA +
Preference number: 5 (lower is better)
Translates to: TQGGNLFSDFSLQLRYQTGKGTI*PFSAVG
Trigger: TCCGACGGCGCTGAAAGGCAAGATTGTTCCTTTGCC...TGTCTGGTACCTGAGCTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp CTCCTGCTAGCTGGGGCATCAGGGCACTCACCATGTCCCTGCACAAGATGCTCAGACCATAAAATCCCTTaGTTAAAGTCCATCCAGGAC +
Preference number: 5 (lower is better)
Translates to: LLLAGASGHSPCPCTRCSDHKIP*LKSIQD
Trigger: GTCCTGGATGGACTTTAACAAAGGGATTTTATGGTC...TGAGCATCTTGTGCAGGGACATGGTGAGTGCCCTGATGCCCCAGCTAGCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp GTGGCTGGGTCTGATGGGGAAGTGGTGTGTTCAGGAGGTTTCCTGGTTGGATTCCAGGAGGTTTCCTGGTaGGATTCTTCAGTGCGTTTT +
Preference number: 5 (lower is better)
Translates to: VAGSDGEVVCSGGFLVGFQEVSW*DSSVRF
Trigger: AAAACGCACTGAAGAATCCAACCAGGAAACCTCCTG...GAATCCAACCAGGAAACCTCCTGAACACACCACTTCCCCATCAGACCCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS TCA 90 bp CTTGTCGTTGATCCCCAAGTGATTGTCCAGCTCAGTGCAAACCTTTaGCACCAAAGACAGGTACTCGAGTTTGGCAAGTTCTTCCGCGGG +
Preference number: 5 (lower is better)
Translates to: LVVDPQVIVQLSANL*HQRQVLEFGKFFRG
Trigger: CCCGCGGAAGAACTTGCCAAACTCGAGTACCTGTCTTTGGTGTCAAAGGTTTGCACTGAGCTGGACAATCACTTGGGGATCAACGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000592258.5
ENST00000650571.1
CDS TCA 90 bp AGCACTGACAAGGGACAAGTGAGTGGGTCTATCAGGATTCCGCATTaGGGTCTCCTCATTGGTCTCCCCGACAAGATTTCGCCGTCTATT +
Preference number: 5 (lower is better)
Translates to: STDKGQVSGSIRIPH*GLLIGLPDKISPSI
Trigger: AATAGACGGCGAAATCTTGTCGGGGAGACCAATGAGGAGACCTCAATGCGGAATCCTGATAGACCCACTCACTTGTCCCTTGTCAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS GCA 90 bp TTTGAGTTCCCGCCTTTCTTTGGCCAAGGCACTCTGCATCATTGCTaGTTGGGAGAGGGAGCCGTCTGGGTTCTTGACAATTTTAATGGG +
Preference number: 5 (lower is better)
Translates to: FEFPPFFGQGTLHHC*LGEGAVWVLDNFNG
Trigger: CCCATTAAAATTGTCAAGAACCCAGACGGCTCCCTCTCCCAAGCAGCAATGATGCAGAGTGCCTTGGCCAAAGAAAGGCGGGAACTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS GCA 90 bp ACAACCTTTCTGCTGCCTGGTGGAGCTGGGTCAAAGATTCGGGTCTaGATCTCACTGGGAAGAGCAGAGTACACTGGGAGGATAATTAAC +
Preference number: 5 (lower is better)
Translates to: TTFLLPGGAGSKIRV*ISLGRAEYTGRIIN
Trigger: GTTAATTATCCTCCCAGTGTACTCTGCTCTTCCCAGTGAGATGCAGACCCGAATCTTTGACCCAGCTCCACCAGGCAGCAGAAAGGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 90 bp TTCTTCTTTGTCCTGTCCCGGTGTTCAGCATCTCTTTGCTTCTCCTaGCCTGCTGCGCTGGGCATTAAAGCTTCCAGTTCTTTCAGGACA +
Preference number: 5 (lower is better)
Translates to: FFFVLSRCSASLCFS*PAALGIKASSSFRT
Trigger: TGTCCTGAAAGAACTGGAAGCTTTAATGCCCAGCGCAGCAGGCCAGGAGAAGCAAAGAGATGCTGAACACCGGGACAGGACAAAGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 90 bp GATTGTCATGGACGGCCTGGACCAATTGCTCCTTCAGTTTGTAGATaGGCAGGCTCTCCCTCTGCTCAAGGATTGACATCTGGGTCTTTT +
Preference number: 5 (lower is better)
Translates to: DCHGRPGPIAPSVCR*AGSPSAQGLTSGSF
Trigger: AAAAGACCCAGATGTCAATCCTTGAGCAGAGGGAGAGCCTGCCCATCTACAAACTGAAGGAGCAATTGGTCCAGGCCGTCCATGACAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 90 bp GCACTGTGCTTGCTAAGTTGGTTCTCTGGATTTCCGGCACGTTGGTaGTCAGCATTTCATCTCGGTAGGCACGTTCTGTGTACAACCTGT +
Preference number: 5 (lower is better)
Translates to: ALCLLSWFSGFPARW*SAFHLGRHVLCTTC
Trigger: ACAGGTTGTACACAGAACGTGCCTACCGAGATGAAATGCTGACCACCAACGTGCCGGAAATCCAGAGAACCAACTTAGCAAGCACAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 90 bp ACAGCACTGTGCTTGCTAAGTTGGTTCTCTGGATTTCCGGCACGTTaGTGGTCAGCATTTCATCTCGGTAGGCACGTTCTGTGTACAACC +
Preference number: 5 (lower is better)
Translates to: TALCLLSWFSGFPAR*WSAFHLGRHVLCTT
Trigger: GGTTGTACACAGAACGTGCCTACCGAGATGAAATGCTGACCACCAACGTGCCGGAAATCCAGAGAACCAACTTAGCAAGCACAGTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 90 bp CATTACGGAAGAACCCACTGCAGATGGCCTTCTGCACTCGGACTGTaGACTTGCCACAGGAAACAACATCCAGCTTGTGTCTGTCCATTA +
Preference number: 5 (lower is better)
Translates to: HYGRTHCRWPSALGL*TCHRKQHPACVCPL
Trigger: TAATGGACAGACACAAGCTGGATGTTGTTTCCTGTGGCAAGTCCACAGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCCGTAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000589898.1
ENST00000650571.1
CDS CCA 90 bp GCTCAGCTGGAAGCTCTGCTTACCTTTGCTAGTGGAAGGCTTCGCTaGAGGCCGCATGGTTTGTATGAGACGCAGCAAGTTACTAATAAG +
Preference number: 5 (lower is better)
Translates to: AQLEALLTFASGRLR*RPHGLYETQQVTNK
Trigger: CTTATTAGTAACTTGCTGCGTCTCATACAAACCATGCGGCCTCCAGCGAAGCCTTCCACTAGCAAAGGTAAGCAGAGCTTCCAGCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605777.1
CDS-3UTR CAA 90 bp GAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGTGGAGGCCGCATGGTTaGTATGAGACGCAGCAAGTT +
Preference number: 5 (lower is better)
Translates to: ELAEKQHPGKERSPQAEMWRPHG*YETQQV
Trigger: AACTTGCTGCGTCTCATACAAACCATGCGGCCTCCA...CATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp ACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGCTCAGGTACCAGACAGACAGCACTTTGACTTaGACCCTCTGGCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: TQGGNLFSDFSLQLRYQTDSTLT*TLWPLL
Trigger: GAGCAAAGGCCAGAGGGTCAAAGTCAAAGTGCTGTC...TGTCTGGTACCTGAGCTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp GACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGGCTACGATTTCGCCGTCTATTaGGGTTTAGATCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: DSCILRTSLSSISPSPGYDFAVY*GLDLLQ
Trigger: CTGGAGAAGATCTAAACCCAAATAGACGGCGAAATC...GTAGCCAGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CAA 90 bp GAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAATTGAGGTCTCCTCATaGGTCTCCCCGACAAGATTT +
Preference number: 5 (lower is better)
Translates to: EGRVHTRRERELAEKQHPIEVSS*VSPTRF
Trigger: AAATCTTGTCGGGGAGACCAATGAGGAGACCTCAAT...TGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp AAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGTGGCAGCAATCATCTGTTaGATCTCCCACTTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: KEALRSGFRGFRGFSSCVAAIIC*ISHFSG
Trigger: CCCAGAGAAGTGGGAGATCAAACAGATGATTGCTGC...CACACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp CGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCAGCAGCAATCATCTGTTaGATCTCCCACTTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: RRERELAEKQHPGKERSPAAIIC*ISHFSG
Trigger: CCCAGAGAAGTGGGAGATCAAACAGATGATTGCTGC...TGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp CTCAGACAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCTCAACCCAGTGTTTGTaGAGTCCCATGGGAATAGAA +
Preference number: 5 (lower is better)
Translates to: LRQNQEALSLMKGQGSAASTQCL*SPMGIE
Trigger: TTCTATTCCCATGGGACTCAACAAACACTGGGTTGA...GGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTGTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp GGTGTAAAAATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGTTGATACCCATGGCCTaGAGTGACAGCACTGTGCTT +
Preference number: 5 (lower is better)
Translates to: GVKIGGNPEGRVHTRRERLIPMA*SDSTVL
Trigger: AAGCACAGTGCTGTCACTCAAGGCCATGGGTATCAA...CCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGATTTTTACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCAAGGACAGCAGATCATaGATACCCATGGCCTTGAGT +
Preference number: 5 (lower is better)
Translates to: EKQHPGKERSPQAEMMALKDSRS*IPMALS
Trigger: ACTCAAGGCCATGGGTATCAATGATCTGCTGTCCTT...GAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp AGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGGCATTTTGCATAGCATaGGCTCCAGAGGGAACTCTG +
Preference number: 5 (lower is better)
Translates to: RELAEKQHPGKERSPQAEAFCIA*APEGTL
Trigger: CAGAGTTCCCTCTGGAGCCAATGCTATGCAAAATGC...CTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GCCCTGCAGCACAGATACTGGCAGCACAAACCAGCTGAGAGGAGAGGTGTTATGGAAACAACATCCAGCTaGTGTCTGTCCATTATGCCT +
Preference number: 5 (lower is better)
Translates to: ALQHRYWQHKPAERRGVMETTSS*CLSIMP
Trigger: AGGCATAATGGACAGACACAAGCTGGATGTTGTTTC...CATAACACCTCTCCTCTCAGCTGGTTTGTGCTGCCAGTATCTGTGCTGCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp GACAGCTGTATCCTCAGGACCAGCCTGTCATCGATAAGTCCAAGCCCTGGCTACGAAACAACATCCAGCTaGTGTCTGTCCATTATGCCT +
Preference number: 5 (lower is better)
Translates to: DSCILRTSLSSISPSPGYETTSS*CLSIMP
Trigger: AGGCATAATGGACAGACACAAGCTGGATGTTGTTTC...GTAGCCAGGGCTTGGACTTATCGATGACAGGCTGGTCCTGAGGATACAGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CAA 90 bp GGAGGTGGGTGCCCAGTCCCCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTATGTTGCTTCTTCTGTTaGCTTAGCTTAGTTGGGTCT +
Preference number: 5 (lower is better)
Translates to: GGGCPVPVSPLVSFEVPVCCFFC*LSLVGS
Trigger: AGACCCAACTAAGCTAAGCAAACAGAAGAAGCAACA...TACAGGGACCTCAAATGAAACCAAAGGGGAAACGGGGACTGGGCACCCACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp CTCCTGCTAGCTGGGGCATCAGGGCACTCACCATGTCCCTGCACAAGATGCTCAGAAATGAGAGTCGAGTaGAGAAAATGCTCAGTTAAG +
Preference number: 5 (lower is better)
Translates to: LLLAGASGHSPCPCTRCSEMRVE*RKCSVK
Trigger: CTTAACTGAGCATTTTCTCAACTCGACTCTCATTTC...TGAGCATCTTGTGCAGGGACATGGTGAGTGCCCTGATGCCCCAGCTAGCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp CAGAATCAGGAGGCACTCAGCTTAATGAAGGGGCAGGGATCTGCAGCCAGCAGAGGGGAAAGGGAGGTTTaGACCATAAAATCCCTTTGT +
Preference number: 5 (lower is better)
Translates to: QNQEALSLMKGQGSAASRGEREV*TIKSLC
Trigger: ACAAAGGGATTTTATGGTCAAAACCTCCCTTTCCCC...TCTGCTGGCTGCAGATCCCTGCCCCTTCATTAAGCTGAGTGCCTCCTGATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTCAAGGAGCTCACAGTTaGGTGGGGGACACAGACCTG +
Preference number: 5 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCQGAHS*VGDTDL
Trigger: CAGGTCTGTGTCCCCCACCAAACTGTGAGCTCCTTG...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS TCA 90 bp TGGAGAACTTGTTGTTCTTCCAGGAGTTGTACACAGCTAGCAGGGTaGGGTGGTCCCCTTCAGTCTGGTGGAATTTGGCCTTCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: WRTCCSSRSCTQLAG*GGPLQSGGIWPSSD
Trigger: ATCAGAAGAAGGCCAAATTCCACCAGACTGAAGGGGACCACCTCACCCTGCTAGCTGTGTACAACTCCTGGAAGAACAACAAGTTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS TCA 90 bp ATGTGTGTTCACAGCAGACATGCCAACTTAGCCCCAGACCTGCCGTaGGAGGCTGTTATCACAGCCATTTGCATTTCACTCAAAGGGACT +
Preference number: 5 (lower is better)
Translates to: MCVHSRHANLAPDLP*EAVITAICISLKGT
Trigger: AGTCCCTTTGAGTGAAATGCAAATGGCTGTGATAACAGCCTCTCACGGCAGGTCTGGGGCTAAGTTGGCATGTCTGCTGTGAACACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587044.1
CDS GCA 90 bp CTGTTTGAGTTCCCGCCTTTCTTTGGCCAAGGCACTCTGCATCATTaGTGCTTGGGAGAGGGAGCCGTCTGGGTTCTTGACAATTTTAAT +
Preference number: 5 (lower is better)
Translates to: LFEFPPFFGQGTLHH*CLGEGAVWVLDNFN
Trigger: ATTAAAATTGTCAAGAACCCAGACGGCTCCCTCTCCCAAGCAGCAATGATGCAGAGTGCCTTGGCCAAAGAAAGGCGGGAACTCAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS GCA 90 bp TGGGTCCACCACATAGTAGATACCATCAATAGTCAGCGATGTCTCTaGGATATTGGTGGCAATCACAACCTTTCTGCTGCCTGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: WVHHIVDTINSQRCL*DIGGNHNLSAAWWS
Trigger: GCTCCACCAGGCAGCAGAAAGGTTGTGATTGCCACCAATATCGCAGAGACATCGCTGACTATTGATGGTATCTACTATGTGGTGGACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS-3UTR CAA 90 bp GTGATGAGCAGTTTGTTCCTGATTTCCATTCAGAAAACCGTGAGTAGAGGTCCCAGCCATGGCTATAGCTaGCCCAGAACCTCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: VMSSLFLISIQKTVSRGPSHGYS*PRTSFL
Trigger: GAGGAAGGAGGTTCTGGGCAAGCTATAGCCATGGCT...GGGACCTCTACTCACGGTTTTCTGAATGGAAATCAGGAACAAACTGCTCATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp TCATCCAACATGGTCCGAACAGAAGGGTTGTCCGGTTGGCAAAGGACTGGGAAGTTAACAACTGGATCTTaGCTAGTGGAAGGCTTCGCT +
Preference number: 5 (lower is better)
Translates to: SSNMVRTEGLSGWQRTGKLTTGS*LVEGFA
Trigger: AGCGAAGCCTTCCACTAGCAAAGATCCAGTTGTTAA...CTTCCCAGTCCTTTGCCAACCGGACAACCCTTCTGTTCGGACCATGTTGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592258.5
CDS-3UTR CAA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTATTCGGGTGAGGCGCTaGCGTTCCAGTGAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVIRVRR*RSSESS
Trigger: GGACGACTCACTGGAACGCAAGCGCCTCACCCGAAT...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CAA 90 bp CAGGAGAAGCAGCAACGTAACAGGATGTGCCCAATCTCTCAGAAGCTTCTCTACGAGCCGTCTGGGTTCTaGACAATTTTAATGGGGCTC +
Preference number: 5 (lower is better)
Translates to: QEKQQRNRMCPISQKLLYEPSGF*TILMGL
Trigger: GAGCCCCATTAAAATTGTCAAGAACCCAGACGGCTC...GTAGAGAAGCTTCTGAGAGATTGGGCACATCCTGTTACGTTGCTGCTTCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp AAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTTCAGCACATCAGTGTGAATaGTCCTCTCATGTGCCTCGT +
Preference number: 5 (lower is better)
Translates to: KERSPQAEMMALCPLNCSAHQCE*SSHVPR
Trigger: ACGAGGCACATGAGAGGACAATTCACACTGATGTGC...TGAACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp CCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTACTGTCTCTCCCCAGAAGGCCTGTCTCAGGTTCCTTaGTGTACAGTATTTCCACTG +
Preference number: 5 (lower is better)
Translates to: PFPLWFHLRSLYCLSPEGLSQVP*CTVFPL
Trigger: CAGTGGAAATACTGTACACAAAGGAACCTGAGACAG...GCCTTCTGGGGAGAGACAGTACAGGGACCTCAAATGAAACCAAAGGGGAAACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp AGCTGTGAGGAGGGCACAAGGAGGTGGCTATTCTCCAAGCAAGTGCTAGGAAAAAAGGACAGCAGATCATaGATACCCATGGCCTTGAGT +
Preference number: 5 (lower is better)
Translates to: SCEEGTRRWLFSKQVLGKKDSRS*IPMALS
Trigger: ACTCAAGGCCATGGGTATCAATGATCTGCTGTCCTT...TTTTCCTAGCACTTGCTTGGAGAATAGCCACCTCCTTGTGCCCTCCTCACAGCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp GAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGACATGATGAGCATTTaGCATAGCATTGGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: EGRVHTRRERELAEKQHPDMMSI*HSIGSR
Trigger: TCTGGAGCCAATGCTATGCAAAATGCTCATCATGTC...TGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GTAACAGCTAAGCAGAGAGGAGTCAGGAAGCACGGAGAAGACTCTTGGGGCTGGACAGTGATGAGCAGTTaGTTCCTGATTTCCATTCAG +
Preference number: 5 (lower is better)
Translates to: VTAKQRGVRKHGEDSWGWTVMSS*FLISIQ
Trigger: CTGAATGGAAATCAGGAACAAACTGCTCATCACTGT...CCAGCCCCAAGAGTCTTCTCCGTGCTTCCTGACTCCTCTCTGCTTAGCTGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp CCGTGGCTGGGTCTGATGGGGAAGTGGTGTGTTCAGGAGGTTTCCTGGTTGGATCCTCCCCAAATAGCCTaGATTGTAATTCTAATAGCA +
Preference number: 5 (lower is better)
Translates to: PWLGLMGKWCVQEVSWLDPPQIA*IVILIA
Trigger: TGCTATTAGAATTACAATCAAGGCTATTTGGGGAGG...ATCCAACCAGGAAACCTCCTGAACACACCACTTCCCCATCAGACCCAGCCACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS GCA 90 bp CCGTCTGGGTTCTTGACAATTTTAATGGGGCTCATGTCCATGCTTTaGTTAGTGTGCCCTCTCAGGAATGGAGGCTCTTCCTCAACCAAT +
Preference number: 5 (lower is better)
Translates to: PSGFLTILMGLMSML*LVCPLRNGGSSSTN
Trigger: ATTGGTTGAGGAAGAGCCTCCATTCCTGAGAGGGCACACTAAGCAAAGCATGGACATGAGCCCCATTAAAATTGTCAAGAACCCAGACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS-3UTR CAA 90 bp GGAGGTGGGTGCCCAGTCCCCGTTTCCCCTTTGGTTTCATTTGAGGTCCCTGTAAATTCTGCACCATTTTaGACGAGAGAAGCCTTAAAA +
Preference number: 5 (lower is better)
Translates to: GGGCPVPVSPLVSFEVPVNSAPF*TREALK
Trigger: TTTTAAGGCTTCTCTCGTCAAAAATGGTGCAGAATT...TACAGGGACCTCAAATGAAACCAAAGGGGAAACGGGGACTGGGCACCCACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp AAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGTGGATTTCGCCGTCTATTaGGGTTTAGATCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: KEALRSGFRGFRGFSSCVDFAVY*GLDLLQ
Trigger: CTGGAGAAGATCTAAACCCAAATAGACGGCGAAATC...CACACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp GGTGTAAAAATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGATTTCGCCGTCTATTaGGGTTTAGATCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: GVKIGGNPEGRVHTRRERDFAVY*GLDLLQ
Trigger: CTGGAGAAGATCTAAACCCAAATAGACGGCGAAATC...CCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGATTTTTACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGTATCAGGATTCCGCATaGAGGTCTCCTCATTGGTCT +
Preference number: 5 (lower is better)
Translates to: ELAEKQHPGKERSPQAEMYQDSA*RSPHWS
Trigger: AGACCAATGAGGAGACCTCAATGCGGAATCCTGATA...CATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp ATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGGAGTTAGCTTCTTTGGAAAGGACATaGGCAGCAATCATCTGTTTG +
Preference number: 5 (lower is better)
Translates to: IGGNPEGRVHTRRERELASLERT*AAIICL
Trigger: CAAACAGATGATTGCTGCCAATGTCCTTTCCAAAGA...AGCTAACTCCCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp AAAGCCAAGCTATCGTGGTGGGAAGAAGGTGTAAAAATCGGTGGAAACCCTGAACCAATACCCCTCATGTaGGCAGCAATCTGTCTGCCT +
Preference number: 5 (lower is better)
Translates to: KAKLSWWEEGVKIGGNPEPIPLM*AAICLP
Trigger: AGGCAGACAGATTGCTGCCAACATGAGGGGTATTGG...TTCAGGGTTTCCACCGATTTTTACACCTTCTTCCCACCACGATAGCTTGGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp AAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTTCACACTCAGGAATATCATaGGGCATCATCCCAATACCC +
Preference number: 5 (lower is better)
Translates to: KERSPQAEMMALCPLNCSHSGIS*GIIPIP
Trigger: GGGTATTGGGATGATGCCCAATGATATTCCTGAGTG...TGAACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp AAAGAGGCCCTGCGTTCTGGTTTCAGGGGATTCAGGGGATTCTCATCATGTGTGCCATCTGTCATGTACTaGATGACTGTTTCAGGGCTA +
Preference number: 5 (lower is better)
Translates to: KEALRSGFRGFRGFSSCVPSVMY*MTVSGL
Trigger: TAGCCCTGAAACAGTCATCAAGTACATGACAGATGG...CACACATGATGAGAATCCCCTGAATCCCCTGAAACCAGAACGCAGGGCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp GAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGCTGATCTGCAAGGGCTaGTTTATCCTTGGGCCTATA +
Preference number: 5 (lower is better)
Translates to: ELAEKQHPGKERSPQAEMLICKG*FILGPI
Trigger: TATAGGCCCAAGGATAAACAAGCCCTTGCAGATCAG...CATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGGGGTTGGAGAACTTGTaGTTCTTCCAGGAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: ELAEKQHPGKERSPQAEMGLENL*FFQELY
Trigger: GTACAACTCCTGGAAGAACAACAAGTTCTCCAACCC...CATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp AAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTTCACATGGGTTGGAGAACTaGTTGTTCTTCCAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: KERSPQAEMMALCPLNCSHGLEN*LFFQEL
Trigger: CAACTCCTGGAAGAACAACAAGTTCTCCAACCCATG...TGAACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp ACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGCTCAGGTACCAGACACATGGGTTGGAGAACTaGTTGTTCTTCCAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: TQGGNLFSDFSLQLRYQTHGLEN*LFFQEL
Trigger: CAACTCCTGGAAGAACAACAAGTTCTCCAACCCATG...TGTCTGGTACCTGAGCTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp GCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGATGGCCACCAGTCCCAGTTCTTaGTTCAAATCCTCAAACTTG +
Preference number: 5 (lower is better)
Translates to: AEKQHPGKERSPQAEMMATSPSS*FKSSNL
Trigger: CAAGTTTGAGGATTTGAACAAAGAACTGGGACTGGT...GGCCATCATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540306.5
ENST00000587574.1
CDS GCA 90 bp TGCTCTTTCACAATAACAACCAATGCTTATTGGGCATTTACTAGGTaGCTTCCAGACAGGAAAGGCACATGCCCTGCCCTCAAGGAGATC +
Preference number: 5 (lower is better)
Translates to: CSFTITTNAYWAFTR*LPDRKGTCPALKEI
Trigger: GATCTCCTTGAGGGCAGGGCATGTGCCTTTCCTGTCTGGAAGGCACCTAGTAAATGCCCAATAAGCATTGGTTGTTATTGTGAAAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588996.1
CDS CCA 90 bp ACAAGTGAGTGGGTCTATCAGGATTCCGCATTGAGGTCTCCTCATTaGTCTCCCCGACAAGATTTCGCCGTCTATTTGGGTTTAGATCTT +
Preference number: 5 (lower is better)
Translates to: TSEWVYQDSALRSPH*SPRQDFAVYLGLDL
Trigger: AAGATCTAAACCCAAATAGACGGCGAAATCTTGTCGGGGAGACCAATGAGGAGACCTCAATGCGGAATCCTGATAGACCCACTCACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS-3UTR CAA 90 bp GTAACAGCTAAGCAGAGAGGAGTCAGGAAGCACGGAGAAGACTCTTGGGGCTGGAATTCTGCACCATTTTaGACGAGAGAAGCCTTAAAA +
Preference number: 5 (lower is better)
Translates to: VTAKQRGVRKHGEDSWGWNSAPF*TREALK
Trigger: TTTTAAGGCTTCTCTCGTCAAAAATGGTGCAGAATT...CCAGCCCCAAGAGTCTTCTCCGTGCTTCCTGACTCCTCTCTGCTTAGCTGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp CAGGAGAAGCAGCAACGTAACAGGATGTGCCCAATCTCTCAGAAGCTTCTCTACTTAACAACTGGATCTTaGCTAGTGGAAGGCTTCGCT +
Preference number: 5 (lower is better)
Translates to: QEKQQRNRMCPISQKLLYLTTGS*LVEGFA
Trigger: AGCGAAGCCTTCCACTAGCAAAGATCCAGTTGTTAA...GTAGAGAAGCTTCTGAGAGATTGGGCACATCCTGTTACGTTGCTGCTTCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp GTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAATTAACAACTGGATCTTaGCTAGTGGAAGGCTTCGCT +
Preference number: 5 (lower is better)
Translates to: VHTRRERELAEKQHPGKELTTGS*LVEGFA
Trigger: AGCGAAGCCTTCCACTAGCAAAGATCCAGTTGTTAA...TTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp ACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGCTCAGGTACCAGACATTAACAACTGGATCTTaGCTAGTGGAAGGCTTCGCT +
Preference number: 5 (lower is better)
Translates to: TQGGNLFSDFSLQLRYQTLTTGS*LVEGFA
Trigger: AGCGAAGCCTTCCACTAGCAAAGATCCAGTTGTTAA...TGTCTGGTACCTGAGCTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp AGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGTCTGGAAATTCTTCTTaGGAAAGGACATTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: RELAEKQHPGKERSPQAESGNSS*ERTLAA
Trigger: TGCTGCCAATGTCCTTTCCAAAGAAGAATTTCCAGA...CTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GTACACACACGAAGAGAGAGGGAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAATCAACCCAGTGTTTGTaGAGTCCCATGGGAATAGAA +
Preference number: 5 (lower is better)
Translates to: VHTRRERELAEKQHPGKESTQCL*SPMGIE
Trigger: TTCTATTCCCATGGGACTCAACAAACACTGGGTTGA...TTCTTTCCCTGGATGCTGCTTCTCAGCTAACTCCCTCTCTCTTCGTGTGTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GTGATGAGCAGTTTGTTCCTGATTTCCATTCAGAAAACCGTGAGTAGAGGTCCCGACGGCCTGGACCAATaGCTCCTTCAGTTTGTAGAT +
Preference number: 5 (lower is better)
Translates to: VMSSLFLISIQKTVSRGPDGLDQ*LLQFVD
Trigger: ATCTACAAACTGAAGGAGCAATTGGTCCAGGCCGTC...GGGACCTCTACTCACGGTTTTCTGAATGGAAATCAGGAACAAACTGCTCATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp AAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTTCACCATCTGTCATGTACTaGATGACTGTTTCAGGGCTA +
Preference number: 5 (lower is better)
Translates to: KERSPQAEMMALCPLNCSPSVMY*MTVSGL
Trigger: TAGCCCTGAAACAGTCATCAAGTACATGACAGATGG...TGAACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGCACATCAGTGTGAATaGTCCTCTCATGTGCCTCGT +
Preference number: 5 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCAHQCE*SSHVPR
Trigger: ACGAGGCACATGAGAGGACAATTCACACTGATGTGC...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CAA 90 bp AAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTTCACTGTCTCAGGTTCCTTaGTGTACAGTATTTCCACTG +
Preference number: 5 (lower is better)
Translates to: KERSPQAEMMALCPLNCSLSQVP*CTVFPL
Trigger: CAGTGGAAATACTGTACACAAAGGAACCTGAGACAG...TGAACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGGATGTCTCTGCGATATaGGTGGCAATCACAACCTTT +
Preference number: 5 (lower is better)
Translates to: ELAEKQHPGKERSPQAEMDVSAI*VAITTF
Trigger: AAAGGTTGTGATTGCCACCAATATCGCAGAGACATC...CATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp GAGTTAGCTGAGAAGCAGCATCCAGGGAAAGAAAGGTCTCCACAAGCTGAGATGGAAACAACATCCAGCTaGTGTCTGTCCATTATGCCT +
Preference number: 5 (lower is better)
Translates to: ELAEKQHPGKERSPQAEMETTSS*CLSIMP
Trigger: AGGCATAATGGACAGACACAAGCTGGATGTTGTTTC...CATCTCAGCTTGTGGAGACCTTTCTTTCCCTGGATGCTGCTTCTCAGCTAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp ACTCAGGGAGGCAATTTGTTCTCTGACTTCTCTCTGCAGCTCAGGTACCAGACAGTCCCTTTCTTGAAGTaGATGCAATGTGTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: TQGGNLFSDFSLQLRYQTVPFLK*MQCVSV
Trigger: CACAGAGACACATTGCATCAACTTCAAGAAAGGGAC...TGTCTGGTACCTGAGCTGCAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS TCA 90 bp AGACTGATCACAAATTCAGCAAGGTCCTTGTCGTTGATCCCCAAGTaGTTGTCCAGCTCAGTGCAAACCTTTGACACCAAAGACAGGTAC +
Preference number: 5 (lower is better)
Translates to: RLITNSARSLSLIPK*LSSSVQTFDTKDRY
Trigger: GTACCTGTCTTTGGTGTCAAAGGTTTGCACTGAGCTGGACAATCACTTGGGGATCAACGACAAGGACCTTGCTGAATTTGTGATCAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000650571.1
CDS TCA 90 bp TCCGGAGTGAGTGCTGGAGTCCAGGAAGTGCTATGGAAGCAGCTGTaGATCAGTTACTGCTCTTTCACAATAACAACCAATGCTTATTGG +
Preference number: 5 (lower is better)
Translates to: SGVSAGVQEVLWKQL*ISYCSFTITTNAYW
Trigger: CCAATAAGCATTGGTTGTTATTGTGAAAGAGCAGTAACTGATTCACAGCTGCTTCCATAGCACTTCCTGGACTCCAGCACTCACTCCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588996.1
CDS-3UTR CAA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTTGGAGGCCGCATGGTTaGTATGAGACGCAGCAAGTT +
Preference number: 5 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVWRPHG*YETQQV
Trigger: AACTTGCTGCGTCTCATACAAACCATGCGGCCTCCA...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CAA 90 bp TCTTTAGGGTGTGGTTTGCTGCCCAGTGACAACATACATTCCTTTATATCCTGGTTGATACCCATGGCCTaGAGTGACAGCACTGTGCTT +
Preference number: 5 (lower is better)
Translates to: SLGCGLLPSDNIHSFISWLIPMA*SDSTVL
Trigger: AAGCACAGTGCTGTCACTCAAGGCCATGGGTATCAA...CCAGGATATAAAGGAATGTATGTTGTCACTGGGCAGCAAACCACACCCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp AGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACCTGGACATGATGAGCATTTaGCATAGCATTGGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: SFSTSTTSRPAFRKFRNLDMMSI*HSIGSR
Trigger: TCTGGAGCCAATGCTATGCAAAATGCTCATCATGTC...CAGGTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTCTGATCTGCAAGGGCTaGTTTATCCTTGGGCCTATA +
Preference number: 5 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCLICKG*FILGPI
Trigger: TATAGGCCCAAGGATAAACAAGCCCTTGCAGATCAG...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CAA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGGGTTGGAGAACTTGTaGTTCTTCCAGGAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCGLENL*FFQELY
Trigger: GTACAACTCCTGGAAGAACAACAAGTTCTCCAACCC...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CAA 90 bp AGAAGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACCATGGGTTGGAGAACTaGTTGTTCTTCCAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: RSFSTSTTSRPAFRKFRNHGLEN*LFFQEL
Trigger: CAACTCCTGGAAGAACAACAAGTTCTCCAACCCATG...GTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTTCCTGCGGGTCTTTCTaGGCAGCATTACGGAAGAAC +
Preference number: 5 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVSCGSF*AALRKN
Trigger: GTTCTTCCGTAATGCTGCCAAGAAAGACCCGCAGGA...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CAA 90 bp AGCTGTGAGGAGGGCACAAGGAGGTGGCTATTCTCCAAGCAAGTGCTAGGAAAACAAATTGTCCCTTTCTaGAAGTTGATGCAATGTGTC +
Preference number: 5 (lower is better)
Translates to: SCEEGTRRWLFSKQVLGKQIVPF*KLMQCV
Trigger: GACACATTGCATCAACTTCAAGAAAGGGACAATTTG...TTTTCCTAGCACTTGCTTGGAGAATAGCCACCTCCTTGTGCCCTCCTCACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp TCTTTAGGGTGTGGTTTGCTGCCCAGTGACAACATACATTCCTTTATATCCTGGCCCCTTTGGTTTCATTaGAGGTCCCTGTACTGTCTC +
Preference number: 5 (lower is better)
Translates to: SLGCGLLPSDNIHSFISWPLWFH*RSLYCL
Trigger: GAGACAGTACAGGGACCTCAAATGAAACCAAAGGGG...CCAGGATATAAAGGAATGTATGTTGTCACTGGGCAGCAAACCACACCCTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp AAAGAAAGGTCTCCACAAGCTGAGATGATGGCCCTCTGCCCTCTGAACTGTTCAACCAGTCCCAGTTCTTaGTTCAAATCCTCAAACTTG +
Preference number: 5 (lower is better)
Translates to: KERSPQAEMMALCPLNCSTSPSS*FKSSNL
Trigger: CAAGTTTGAGGATTTGAACAAAGAACTGGGACTGGT...TGAACAGTTCAGAGGGCAGAGGGCCATCATCTCAGCTTGTGGAGACCTTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540306.5
ENST00000587574.1
CDS TCA 90 bp TCCGGGTCAGCGCGCGTCCCCTTTGTTTACGGTAAATTGAAAATTTaGGGAACGAATCAAGTCCCAACAGGATGGATCATAGAGATCAAA +
Preference number: 5 (lower is better)
Translates to: SGSARVPFVYGKLKI*GTNQVPTGWIIEIK
Trigger: TTTGATCTCTATGATCCATCCTGTTGGGACTTGATTCGTTCCTCAAATTTTCAATTTACCGTAAACAAAGGGGACGCGCGCTGACCCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592258.5
CDS-3UTR CAA 90 bp GGTGTAAAAATCGGTGGAAACCCTGAAGGCCGAGTACACACACGAAGAGAGAGGAATTCTGCACCATTTTaGACGAGAGAAGCCTTAAAA +
Preference number: 5 (lower is better)
Translates to: GVKIGGNPEGRVHTRRERNSAPF*TREALK
Trigger: TTTTAAGGCTTCTCTCGTCAAAAATGGTGCAGAATT...CCTCTCTCTTCGTGTGTGTACTCGGCCTTCAGGGTTTCCACCGATTTTTACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540306.5
CDS-3UTR CAA 90 bp CTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCCATAGAAGGGTTGTCCGGTaGGCAAAGGACTGGGAAGAG +
Preference number: 5 (lower is better)
Translates to: LSIKYTQYSLFPWVFISHRRVVR*AKDWEE
Trigger: CTCTTCCCAGTCCTTTGCCAACCGGACAACCCTTCT...ATGGGAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp TCTTTAGGGTGTGGTTTGCTGCCCAGTGACAACATACATTCCTTTATATCCTGGCACTCAGGAATATCATaGGGCATCATCCCAATACCC +
Preference number: 5 (lower is better)
Translates to: SLGCGLLPSDNIHSFISWHSGIS*GIIPIP
Trigger: GGGTATTGGGATGATGCCCAATGATATTCCTGAGTG...CCAGGATATAAAGGAATGTATGTTGTCACTGGGCAGCAAACCACACCCTAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTGACGGCCTGGACCAATaGCTCCTTCAGTTTGTAGAT +
Preference number: 5 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVDGLDQ*LLQFVD
Trigger: ATCTACAAACTGAAGGAGCAATTGGTCCAGGCCGTC...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CAA 90 bp AGAAGCTTCTCTACAAGCACTACATCCAGACCAGCTTTCCGTAAGTTCCGAAACGATGTCTCTGCGATATaGGTGGCAATCACAACCTTT +
Preference number: 5 (lower is better)
Translates to: RSFSTSTTSRPAFRKFRNDVSAI*VAITTF
Trigger: AAAGGTTGTGATTGCCACCAATATCGCAGAGACATC...GTTTCGGAACTTACGGAAAGCTGGTCTGGATGTAGTGCTTGTAGAGAAGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp GTGATGAGCAGTTTGTTCCTGATTTCCATTCAGAAAACCGTGAGTAGAGGTCCCGATGTCTCTGCGATATaGGTGGCAATCACAACCTTT +
Preference number: 5 (lower is better)
Translates to: VMSSLFLISIQKTVSRGPDVSAI*VAITTF
Trigger: AAAGGTTGTGATTGCCACCAATATCGCAGAGACATC...GGGACCTCTACTCACGGTTTTCTGAATGGAAATCAGGAACAAACTGCTCATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS TCA 90 bp AGCTTCATAGAAGTATTGAGAAAACTTCACTGCATCCAAGGTGGCTaGGGTGACAATCAGCTTCATGTCCTGCCGTTTCTGAACTGTCTT +
Preference number: 5 (lower is better)
Translates to: SFIEVLRKLHCIQGG*GDNQLHVLPFLNCL
Trigger: AAGACAGTTCAGAAACGGCAGGACATGAAGCTGATTGTCACCTCAGCCACCTTGGATGCAGTGAAGTTTTCTCAATACTTCTATGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS GCA 90 bp TTCTTGACAATTTTAATGGGGCTCATGTCCATGCTTTGCTTAGTGTaGCCTCTCAGGAATGGAGGCTCTTCCTCAACCAATTCAATCTCA +
Preference number: 5 (lower is better)
Translates to: FLTILMGLMSMLCLV*PLRNGGSSSTNSIS
Trigger: TGAGATTGAATTGGTTGAGGAAGAGCCTCCATTCCTGAGAGGGCACACTAAGCAAAGCATGGACATGAGCCCCATTAAAATTGTCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS-3UTR CAA 90 bp AAACCTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCGTCCGAACAGAAGGGTaGTCCGGTTGGCAAAGGACT +
Preference number: 5 (lower is better)
Translates to: KPKHKIYTVFPISLGLHLVRTEG*SGWQRT
Trigger: AGTCCTTTGCCAACCGGACAACCCTTCTGTTCGGAC...GAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp CTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCCATGTGAAGGACAGCACTTaGACTTTGACCCTCTGGCCT +
Preference number: 5 (lower is better)
Translates to: LSIKYTQYSLFPWVFISHVKDST*TLTLWP
Trigger: AGGCCAGAGGGTCAAAGTCAAAGTGCTGTCCTTCAC...ATGGGAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTTCTTTGGAAAGGACATaGGCAGCAATCATCTGTTTG +
Preference number: 5 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCSLERT*AAIICL
Trigger: CAAACAGATGATTGCTGCCAATGTCCTTTCCAAAGA...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CAA 90 bp AAACCTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCAGTTCCCGCCTTTCTTaGGCCAAGGCACTCTGCATC +
Preference number: 5 (lower is better)
Translates to: KPKHKIYTVFPISLGLHLSSRLS*AKALCI
Trigger: GATGCAGAGTGCCTTGGCCAAAGAAAGGCGGGAACT...GAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp CAGACAGTGATGAGCAGTTTGTTCCTGATTTCCATTCAGAAAACCGTGAGTAGACACTCAGGAATATCATaGGGCATCATCCCAATACCC +
Preference number: 5 (lower is better)
Translates to: QTVMSSLFLISIQKTVSRHSGIS*GIIPIP
Trigger: GGGTATTGGGATGATGCCCAATGATATTCCTGAGTG...TCTACTCACGGTTTTCTGAATGGAAATCAGGAACAAACTGCTCATCACTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp CAGACAGTGATGAGCAGTTTGTTCCTGATTTCCATTCAGAAAACCGTGAGTAGAAAGGACAGCAGATCATaGATACCCATGGCCTTGAGT +
Preference number: 5 (lower is better)
Translates to: QTVMSSLFLISIQKTVSRKDSRS*IPMALS
Trigger: ACTCAAGGCCATGGGTATCAATGATCTGCTGTCCTT...TCTACTCACGGTTTTCTGAATGGAAATCAGGAACAAACTGCTCATCACTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTCTGATCTGCAAGGGCTaGTTTATCCTTGGGCCTATA +
Preference number: 5 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVLICKG*FILGPI
Trigger: TATAGGCCCAAGGATAAACAAGCCCTTGCAGATCAG...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CAA 90 bp CCTTCCCATCCTGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTTGTTGCTTCTTCTGTTaGCTTAGCTTAGTTGGGTCT +
Preference number: 5 (lower is better)
Translates to: PSHPGAAQIVPFLKLMQCCCFFC*LSLVGS
Trigger: AGACCCAACTAAGCTAAGCAAACAGAAGAAGCAACA...ACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCAGGATGGGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CAA 90 bp CTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCCATGGAGGCTGCAGGCTCTaGCCAAAGCCAGGTTTAAAT +
Preference number: 5 (lower is better)
Translates to: LSIKYTQYSLFPWVFISHGGCRL*PKPGLN
Trigger: ATTTAAACCTGGCTTTGGCAAGAGCCTGCAGCCTCC...ATGGGAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS TCA 90 bp CATAGAAGTATTGAGAAAACTTCACTGCATCCAAGGTGGCTGAGGTaGCAATCAGCTTCATGTCCTGCCGTTTCTGAACTGTCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: HRSIEKTSLHPRWLR*QSASCPAVSELSFS
Trigger: TGAAAAAGACAGTTCAGAAACGGCAGGACATGAAGCTGATTGTCACCTCAGCCACCTTGGATGCAGTGAAGTTTTCTCAATACTTCTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 90 bp GTCAATCCCTGTCTTGGAATTGTAAACTTTCTGTTTCACGAATCCTaGGTCCACCACATAGTAGATACCATCAATAGTCAGCGATGTCTC +
Preference number: 5 (lower is better)
Translates to: VNPCLGIVNFLFHES*VHHIVDTINSQRCL
Trigger: GAGACATCGCTGACTATTGATGGTATCTACTATGTGGTGGACCCAGGATTCGTGAAACAGAAAGTTTACAATTCCAAGACAGGGATTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS-3UTR CAA 90 bp TCTTTAGGGTGTGGTTTGCTGCCCAGTGACAACATACATTCCTTTATATCCTGGTCTGGAAATTCTTCTTaGGAAAGGACATTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: SLGCGLLPSDNIHSFISWSGNSS*ERTLAA
Trigger: TGCTGCCAATGTCCTTTCCAAAGAAGAATTTCCAGA...CCAGGATATAAAGGAATGTATGTTGTCACTGGGCAGCAAACCACACCCTAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp CTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCCATGAGCCGTCTGGGTTCTaGACAATTTTAATGGGGCTC +
Preference number: 5 (lower is better)
Translates to: LSIKYTQYSLFPWVFISHEPSGF*TILMGL
Trigger: GAGCCCCATTAAAATTGTCAAGAACCCAGACGGCTC...ATGGGAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp TGGAGCTGCACAAATTGTCCCTTTCTTGAAGTTGATGCAATGTGTCTCTGTGTTCTGTCTCAGGTTCCTTaGTGTACAGTATTTCCACTG +
Preference number: 5 (lower is better)
Translates to: WSCTNCPFLEVDAMCLCVLSQVP*CTVFPL
Trigger: CAGTGGAAATACTGTACACAAAGGAACCTGAGACAG...AACACAGAGACACATTGCATCAACTTCAAGAAAGGGACAATTTGTGCAGCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS-3UTR CAA 90 bp CTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCCATACTGTGCTTGCTAAGTaGGTTCTCTGGATTTCCGGC +
Preference number: 5 (lower is better)
Translates to: LSIKYTQYSLFPWVFISHTVLAK*VLWISG
Trigger: GCCGGAAATCCAGAGAACCAACTTAGCAAGCACAGT...ATGGGAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp TTGATTGTAATTCTAATAGCAAGTGTTCCTCCCTCTTCCATCCCGCTTGAATACCATGGGTTGGAGAACTaGTTGTTCTTCCAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: LIVILIASVPPSSIPLEYHGLEN*LFFQEL
Trigger: CAACTCCTGGAAGAACAACAAGTTCTCCAACCCATG...GTATTCAAGCGGGATGGAAGAGGGAGGAACACTTGCTATTAGAATTACAATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS CCA 90 bp ATCCAGATAATCTGTCTCAGGTTCCTTTGTGTACAGTATTTCCACTaGATATGTTCGACCTGGGATGGTGAAAATGGGAGCTTCATAGAA +
Preference number: 5 (lower is better)
Translates to: IQIICLRFLCVQYFH*ICSTWDGENGSFIE
Trigger: TTCTATGAAGCTCCCATTTTCACCATCCCAGGTCGAACATATCCAGTGGAAATACTGTACACAAAGGAACCTGAGACAGATTATCTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 90 bp AAGAAGGCATGTGATAAGAGGGTCAGTCTAGCCAGTGTCAGCATGTaGGGAAGCTACTTGTTACTTTATTTCCCATTTCTTCAATTGCAA +
Preference number: 5 (lower is better)
Translates to: KKACDKRVSLASVSM*GSYLLLYFPFLQLQ
Trigger: TTGCAATTGAAGAAATGGGAAATAAAGTAACAAGTAGCTTCCCCACATGCTGACACTGGCTAGACTGACCCTCTTATCACATGCCTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587044.1
CDS-3UTR CAA 90 bp CAGACAGTGATGAGCAGTTTGTTCCTGATTTCCATTCAGAAAACCGTGAGTAGATCTGGAAATTCTTCTTaGGAAAGGACATTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: QTVMSSLFLISIQKTVSRSGNSS*ERTLAA
Trigger: TGCTGCCAATGTCCTTTCCAAAGAAGAATTTCCAGA...TCTACTCACGGTTTTCTGAATGGAAATCAGGAACAAACTGCTCATCACTGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp AAACCTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCTTGTTCTTCCAGGAGTaGTACACAGCTAGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: KPKHKIYTVFPISLGLHLLFFQE*YTASRV
Trigger: CACCCTGCTAGCTGTGTACAACTCCTGGAAGAACAA...GAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS TCA 90 bp CCTTTGTGTACAGTATTTCCACTGGATATGTTCGACCTGGGATGGTaGAAATGGGAGCTTCATAGAAGTATTGAGAAAACTTCACTGCAT +
Preference number: 5 (lower is better)
Translates to: PLCTVFPLDMFDLGW*KWELHRSIEKTSLH
Trigger: ATGCAGTGAAGTTTTCTCAATACTTCTATGAAGCTCCCATTTTCACCATCCCAGGTCGAACATATCCAGTGGAAATACTGTACACAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS TCA 90 bp TTCATTCTTTCATACAGGATCTCACAAGCAGTATCAATTTCTTCCTaGCCAGTCAGGAAGACCAGGATATCACCTGGTGGTTCTGTTAAA +
Preference number: 5 (lower is better)
Translates to: FILSYRISQAVSISS*PVRKTRISPGGSVK
Trigger: TTTAACAGAACCACCAGGTGATATCCTGGTCTTCCTGACTGGTCAGGAAGAAATTGATACTGCTTGTGAGATCCTGTATGAAAGAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 90 bp TTCATCATCCACCTTAGGGAGAATGCCAGTCTCTTCATCAAAGTCTaGAAATTCTTCTTTGGAAAGGACATTGGCAGCAATCATCTGTTT +
Preference number: 5 (lower is better)
Translates to: FIIHLRENASLFIKV*KFFFGKDIGSNHLF
Trigger: AAACAGATGATTGCTGCCAATGTCCTTTCCAAAGAAGAATTTCCAGACTTTGATGAAGAGACTGGCATTCTCCCTAAGGTGGATGATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 90 bp CTCAGGTTCCTTTGTGTACAGTATTTCCACTGGATATGTTCGACCTaGGATGGTGAAAATGGGAGCTTCATAGAAGTATTGAGAAAACTT +
Preference number: 5 (lower is better)
Translates to: LRFLCVQYFHWICST*DGENGSFIEVLRKL
Trigger: AAGTTTTCTCAATACTTCTATGAAGCTCCCATTTTCACCATCCCAGGTCGAACATATCCAGTGGAAATACTGTACACAAAGGAACCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS-3UTR CAA 90 bp CTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCCATCCATCTGTCATGTACTaGATGACTGTTTCAGGGCTA +
Preference number: 5 (lower is better)
Translates to: LSIKYTQYSLFPWVFISHPSVMY*MTVSGL
Trigger: TAGCCCTGAAACAGTCATCAAGTACATGACAGATGG...ATGGGAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp TTGATTGTAATTCTAATAGCAAGTGTTCCTCCCTCTTCCATCCCGCTTGAATACACAGTGATGAGCAGTTaGTTCCTGATTTCCATTCAG +
Preference number: 5 (lower is better)
Translates to: LIVILIASVPPSSIPLEYTVMSS*FLISIQ
Trigger: CTGAATGGAAATCAGGAACAAACTGCTCATCACTGT...GTATTCAAGCGGGATGGAAGAGGGAGGAACACTTGCTATTAGAATTACAATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS-3UTR CAA 90 bp AAACCTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCACTCAGGGAGGCAATTaGTTCTCTGACTTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: KPKHKIYTVFPISLGLHLTQGGN*FSDFSL
Trigger: CAGAGAGAAGTCAGAGAACAAATTGCCTCCCTGAGT...GAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS TCA 90 bp CAACTTGTCCTGTCTCTTGCATACATCATTTCTACTATATATCTATaGGGGATCTCATACCATGTTAGGTGGGAGGGATATAAAGATGGC +
Preference number: 5 (lower is better)
Translates to: QLVLSLAYIISTIYL*GISYHVRWEGYKDG
Trigger: GCCATCTTTATATCCCTCCCACCTAACATGGTATGAGATCCCTCATAGATATATAGTAGAAATGATGTATGCAAGAGACAGGACAAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587044.1
CDS-3UTR CAA 90 bp CTCTTAGTGTCTGGCATACAGTTCTACAGTAGTTCTAGCATTTACATCACTTCATCTTTGGAAAGGACATaGGCAGCAATCATCTGTTTG +
Preference number: 5 (lower is better)
Translates to: LLVSGIQFYSSSSIYITSSLERT*AAIICL
Trigger: CAAACAGATGATTGCTGCCAATGTCCTTTCCAAAGA...TGAAGTGATGTAAATGCTAGAACTACTGTAGAACTGTATGCCAGACACTAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262415.8
CDS-3UTR CAA 90 bp AAACCTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCTCAACCCAGTGTTTGTaGAGTCCCATGGGAATAGAA +
Preference number: 5 (lower is better)
Translates to: KPKHKIYTVFPISLGLHLSTQCL*SPMGIE
Trigger: TTCTATTCCCATGGGACTCAACAAACACTGGGTTGA...GAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp AAACCTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCGACATGATGAGCATTTaGCATAGCATTGGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: KPKHKIYTVFPISLGLHLDMMSI*HSIGSR
Trigger: TCTGGAGCCAATGCTATGCAAAATGCTCATCATGTC...GAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS-3UTR CAA 90 bp CTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCCATGAAATGAGAGTCGAGTaGAGAAAATGCTCAGTTAAG +
Preference number: 5 (lower is better)
Translates to: LSIKYTQYSLFPWVFISHEMRVE*RKCSVK
Trigger: CTTAACTGAGCATTTTCTCAACTCGACTCTCATTTC...ATGGGAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS GCA 90 bp GTGAGAGGCTGTTATCACAGCCATTTGCATTTCACTCAAAGGGACTaGTTTCATGAGGTTACTAAAGTATTTAACAAGGTTCATAAAACT +
Preference number: 5 (lower is better)
Translates to: VRGCYHSHLHFTQRD*FHEVTKVFNKVHKT
Trigger: AGTTTTATGAACCTTGTTAAATACTTTAGTAACCTCATGAAAGCAGTCCCTTTGAGTGAAATGCAAATGGCTGTGATAACAGCCTCTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587044.1
CDS-3UTR CAA 90 bp AAACCTAAGCATAAAATATACACAGTATTCCCTATTTCCCTGGGTCTTCATCTCCAAATTGTCCCTTTCTaGAAGTTGATGCAATGTGTC +
Preference number: 5 (lower is better)
Translates to: KPKHKIYTVFPISLGLHLQIVPF*KLMQCV
Trigger: GACACATTGCATCAACTTCAAGAAAGGGACAATTTG...GAGATGAAGACCCAGGGAAATAGGGAATACTGTGTATATTTTATGCTTAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650571.1
CDS TCA 72 bp TCCAGGCGGGATGAAGTAAACCTGGACCGAGGAGCCTaGCCCAGCTGCGGAGCTCACACATGCCCCATAGGG +
Preference number: 6 (lower is better)
Translates to: SRRDEVNLDRGA*PSCGAHTCPIG
Trigger: CCCTATGGGGCATGTGTGAGCTCCGCAGCTGGGTCAGGCTCCTCGGTCCAGGTTTACTTCATCCCGCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587574.1
CDS CAA 72 bp TCCCGCCATGGCTACAGCCACAGCCATGGCTATAGCTaGCCCAGAACCTCCTTCCTCACAGCCGGCGCTCAG +
Preference number: 6 (lower is better)
Translates to: SRHGYSHSHGYS*PRTSFLTAGAQ
Trigger: CTGAGCGCCGGCTGTGAGGAAGGAGGTTCTGGGCAAGCTATAGCCATGGCTGTGGCTGTAGCCATGGCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000592258.5
ENST00000650571.1
CDS CCA 72 bp GTCTGGTGTGACTGCAGCGTAGGATCCACGGGCAGCTaGTCCGACTCAGGGAGGCAATTTGTTCCCAGCACC +
Preference number: 6 (lower is better)
Translates to: VWCDCSVGSTGS*SDSGRQFVPST
Trigger: GGTGCTGGGAACAAATTGCCTCCCTGAGTCGGACCAGCTGCCCGTGGATCCTACGCTGCAGTCACACCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588996.1
CDS CAA 72 bp TTGACCCTCTGGCCTTTGCTCACGACATCAGCTACATaGGCCACACGACCCTCCCGCCGGAGCTCAGAGATG +
Preference number: 6 (lower is better)
Translates to: LTLWPLLTTSAT*ATRPSRRSSEM
Trigger: CATCTCTGAGCTCCGGCGGGAGGGTCGTGTGGCCAATGTAGCTGATGTCGTGAGCAAAGGCCAGAGGGTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 90 bp TCCATCTCAGCTTCCCGCTGGGCCTGTTTGAGTTCCCGCCTTTCTTaGGCCAAGGCACTCTGCATCATTGCTGCTTGGGAGAGGGAGCCG +
Preference number: 6 (lower is better)
Translates to: SISASRWACLSSRLS*AKALCIIAAWEREP
Trigger: CGGCTCCCTCTCCCAAGCAGCAATGATGCAGAGTGCCTTGGCCAAAGAAAGGCGGGAACTCAAACAGGCCCAGCGGGAAGCTGAGATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 90 bp ACTTTGACTTTGACCCTCTGGCCTTTGCTCACGACATCAGCTACATaGGCCACACGACCCTCCCGCCGGAGCTCAGAGATGTGCACCAGG +
Preference number: 6 (lower is better)
Translates to: TLTLTLWPLLTTSAT*ATRPSRRSSEMCTR
Trigger: CCTGGTGCACATCTCTGAGCTCCGGCGGGAGGGTCGTGTGGCCAATGTAGCTGATGTCGTGAGCAAAGGCCAGAGGGTCAAAGTCAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 90 bp TTGGTCCCAGTGAAGGACAGCACTTTGACTTTGACCCTCTGGCCTTaGCTCACGACATCAGCTACATTGGCCACACGACCCTCCCGCCGG +
Preference number: 6 (lower is better)
Translates to: LVPVKDSTLTLTLWP*LTTSATLATRPSRR
Trigger: CCGGCGGGAGGGTCGTGTGGCCAATGTAGCTGATGTCGTGAGCAAAGGCCAGAGGGTCAAAGTCAAAGTGCTGTCCTTCACTGGGACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS GCA 72 bp CCAATGGTGGGCTCTTCTGGAGGAGGGCGGTCCACATaGTTATCCCGCCATCTATCCAGATTCCGCTCTCCA +
Preference number: 6 (lower is better)
Translates to: PMVGSSGGGRST*LSRHLSRFRSP
Trigger: TGGAGAGCGGAATCTGGATAGATGGCGGGATAAGCATGTGGACCGCCCTCCTCCAGAAGAGCCCACCATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS GCA 72 bp CCAGCTTGTGTCTGTCCATTATGCCTAACATCTGCTTaGGAATGTCCTGGGCCCGGCGCAGGGAACGAGCCT +
Preference number: 6 (lower is better)
Translates to: PACVCPLCLTSA*ECPGPGAGNEP
Trigger: AGGCTCGTTCCCTGCGCCGGGCCCAGGACATTCGCAAGCAGATGTTAGGCATAATGGACAGACACAAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000589898.1
ENST00000650571.1
CDS CCA 72 bp TCCGCTCTCCATATTTGTCCCGGTCCTTCCGGTCTTTaGGGGGACTCTGACTCCTGCTCCTGGACCGATATC +
Preference number: 6 (lower is better)
Translates to: SALHICPGPSGL*GDSDSCSWTDI
Trigger: GATATCGGTCCAGGAGCAGGAGTCAGAGTCCCCCCAAAGACCGGAAGGACCGGGACAAATATGGAGAGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 72 bp GTGCAAACCTTTGACACCAAAGACAGGTACTCGAGTTaGGCAAGTTCTTCCGCGGGGCCTGGCTCCGACCCG +
Preference number: 6 (lower is better)
Translates to: VQTFDTKDRYSS*ASSSAGPGSDP
Trigger: CGGGTCGGAGCCAGGCCCCGCGGAAGAACTTGCCAAACTCGAGTACCTGTCTTTGGTGTCAAAGGTTTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000592258.5
ENST00000650571.1
CDS CAA 72 bp GCTTCCCGCTGGGCCTGTTTGAGTTCCCGCCTTTCTTaGGCCAAGGCACTCTGCATCATTGCTGCTTGGGAG +
Preference number: 6 (lower is better)
Translates to: ASRWACLSSRLS*AKALCIIAAWE
Trigger: CTCCCAAGCAGCAATGATGCAGAGTGCCTTGGCCAAAGAAAGGCGGGAACTCAAACAGGCCCAGCGGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 72 bp TCCAGCTTGTGTCTGTCCATTATGCCTAACATCTGCTaGCGAATGTCCTGGGCCCGGCGCAGGGAACGAGCC +
Preference number: 6 (lower is better)
Translates to: SSLCLSIMPNIC*RMSWARRRERA
Trigger: GGCTCGTTCCCTGCGCCGGGCCCAGGACATTCGCAAGCAGATGTTAGGCATAATGGACAGACACAAGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000589898.1
ENST00000650571.1
CDS CAA 90 bp TCCCGGGTCCTGGAACGTGATCGAGAGCGGGATCGGTGTCTCCGCTaGTGGTCTCTATCTCGGTTTCGTTCCCTATCTCTGTCTCGATCT +
Preference number: 6 (lower is better)
Translates to: SRVLERDRERDRCLR*WSLSRFRSLSLSRS
Trigger: AGATCGAGACAGAGATAGGGAACGAAACCGAGATAGAGACCACAAGCGGAGACACCGATCCCGCTCTCGATCACGTTCCAGGACCCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS TCA 72 bp AGACTTCACTTTATTCCTCTCCCGGGTCCTGGAACGTaGTCGAGAGCGGGATCGGTGTCTCCGCTTGTGGTC +
Preference number: 6 (lower is better)
Translates to: RLHFIPLPGPGT*SRAGSVSPLVV
Trigger: GACCACAAGCGGAGACACCGATCCCGCTCTCGATCACGTTCCAGGACCCGGGAGAGGAATAAAGTGAAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS TCA 72 bp TGGGTCAGAGATTCGGGTGAGGCGCTTGCGTTCCAGTaGGTCGTCCTCTACTTCAGGAGCACTGACAAGGGA +
Preference number: 6 (lower is better)
Translates to: WVRDSGEALAFQ*VVLYFRSTDKG
Trigger: TCCCTTGTCAGTGCTCCTGAAGTAGAGGACGACTCACTGGAACGCAAGCGCCTCACCCGAATCTCTGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS GCA 72 bp TTCCCGCCTTTCTTTGGCCAAGGCACTCTGCATCATTaGTGCTTGGGAGAGGGAGCCGTCTGGGTTCTTGAC +
Preference number: 6 (lower is better)
Translates to: FPPFFGQGTLHH*CLGEGAVWVLD
Trigger: GTCAAGAACCCAGACGGCTCCCTCTCCCAAGCAGCAATGATGCAGAGTGCCTTGGCCAAAGAAAGGCGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS GCA 72 bp TGTTTGAGTTCCCGCCTTTCTTTGGCCAAGGCACTCTaGATCATTGCTGCTTGGGAGAGGGAGCCGTCTGGG +
Preference number: 6 (lower is better)
Translates to: CLSSRLSLAKAL*IIAAWEREPSG
Trigger: CCCAGACGGCTCCCTCTCCCAAGCAGCAATGATGCAGAGTGCCTTGGCCAAAGAAAGGCGGGAACTCAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS GCA 72 bp CTGGGTACACCCAATCTTGCCCCTGGAAGTGTAGCCTaGCTCCGCCAGGTACTGGGTGATCTGTGTTGTCTT +
Preference number: 6 (lower is better)
Translates to: LGTPNLAPGSVA*LRQVLGDLCCL
Trigger: AAGACAACACAGATCACCCAGTACCTGGCGGAGGCAGGCTACACTTCCAGGGGCAAGATTGGGTGTACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 72 bp TGCAAACCTTTGACACCAAAGACAGGTACTCGAGTTTaGCAAGTTCTTCCGCGGGGCCTGGCTCCGACCCGA +
Preference number: 6 (lower is better)
Translates to: CKPLTPKTGTRV*QVLPRGLAPTR
Trigger: TCGGGTCGGAGCCAGGCCCCGCGGAAGAACTTGCCAAACTCGAGTACCTGTCTTTGGTGTCAAAGGTTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000592258.5
ENST00000650571.1
CDS CAA 72 bp TCCCACTTCTCTGGGTCAGAGATTCGGGTGAGGCGCTaGCGTTCCAGTGAGTCGTCCTCTACTTCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: SHFSGSEIRVRR*RSSESSSTSGA
Trigger: TGCTCCTGAAGTAGAGGACGACTCACTGGAACGCAAGCGCCTCACCCGAATCTCTGACCCAGAGAAGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 90 bp TCCAGCTCAGTGCAAACCTTTGACACCAAAGACAGGTACTCGAGTTaGGCAAGTTCTTCCGCGGGGCCTGGCTCCGACCCGATTAAGGCT +
Preference number: 6 (lower is better)
Translates to: SSSVQTFDTKDRYSS*ASSSAGPGSDPIKA
Trigger: AGCCTTAATCGGGTCGGAGCCAGGCCCCGCGGAAGAACTTGCCAAACTCGAGTACCTGTCTTTGGTGTCAAAGGTTTGCACTGAGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000592258.5
ENST00000650571.1
CDS CAA 90 bp ATCTGTCTGCCTTCCGCATCAGGCAGAGGGTCAACCCAGTGTTTGTaGAGTCCCATGGGAATAGAATCCATCTCAGCTTCCCGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: ICLPSASGRGSTQCL*SPMGIESISASRWA
Trigger: GGCCCAGCGGGAAGCTGAGATGGATTCTATTCCCATGGGACTCAACAAACACTGGGTTGACCCTCTGCCTGATGCGGAAGGCAGACAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS GCA 72 bp CCGCCTTTCTTTGGCCAAGGCACTCTGCATCATTGCTaGTTGGGAGAGGGAGCCGTCTGGGTTCTTGACAAT +
Preference number: 6 (lower is better)
Translates to: PPFFGQGTLHHC*LGEGAVWVLDN
Trigger: ATTGTCAAGAACCCAGACGGCTCCCTCTCCCAAGCAGCAATGATGCAGAGTGCCTTGGCCAAAGAAAGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS GCA 72 bp ACATCCAGCTTGTGTCTGTCCATTATGCCTAACATCTaGTTGCGAATGTCCTGGGCCCGGCGCAGGGAACGA +
Preference number: 6 (lower is better)
Translates to: TSSLCLSIMPNI*LRMSWARRRER
Trigger: TCGTTCCCTGCGCCGGGCCCAGGACATTCGCAAGCAGATGTTAGGCATAATGGACAGACACAAGCTGGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000589898.1
ENST00000650571.1
CDS GCA 72 bp TACCCATCCAGAAACTTGAGCCTGGTCCGGAGTGAGTaGTGGAGTCCAGGAAGTGCTATGGAAGCAGCTGTG +
Preference number: 6 (lower is better)
Translates to: YPSRNLSLVRSE*WSPGSAMEAAV
Trigger: CACAGCTGCTTCCATAGCACTTCCTGGACTCCAGCACTCACTCCGGACCAGGCTCAAGTTTCTGGATGGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588996.1
CDS CCA 72 bp GTCCTGTCCCGGTGTTCAGCATCTCTTTGCTTCTCCTaGCCTGCTGCGCTGGGCATTAAAGCTTCCAGTTCT +
Preference number: 6 (lower is better)
Translates to: VLSRCSASLCFS*PAALGIKASSS
Trigger: AGAACTGGAAGCTTTAATGCCCAGCGCAGCAGGCCAGGAGAAGCAAAGAGATGCTGAACACCGGGACAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 72 bp GGTGGCAATCACAACCTTTCTGCTGCCTGGTGGAGCTaGGTCAAAGATTCGGGTCTGCATCTCACTGGGAAG +
Preference number: 6 (lower is better)
Translates to: GGNHNLSAAWWS*VKDSGLHLTGK
Trigger: CTTCCCAGTGAGATGCAGACCCGAATCTTTGACCCAGCTCCACCAGGCAGCAGAAAGGTTGTGATTGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 72 bp CTTTCTTGGCAGCATTACGGAAGAACCCACTGCAGATaGCCTTCTGCACTCGGACTGTGGACTTGCCACAGG +
Preference number: 6 (lower is better)
Translates to: LSWQHYGRTHCR*PSALGLWTCHR
Trigger: CCTGTGGCAAGTCCACAGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCCGTAATGCTGCCAAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000589898.1
ENST00000650571.1
CDS CAA 72 bp CTGGAACGTGATCGAGAGCGGGATCGGTGTCTCCGCTaGTGGTCTCTATCTCGGTTTCGTTCCCTATCTCTG +
Preference number: 6 (lower is better)
Translates to: LERDRERDRCLR*WSLSRFRSLSL
Trigger: CAGAGATAGGGAACGAAACCGAGATAGAGACCACAAGCGGAGACACCGATCCCGCTCTCGATCACGTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 72 bp CCCATGGCCTTGAGTGACAGCACTGTGCTTGCTAAGTaGGTTCTCTGGATTTCCGGCACGTTGGTGGTCAGC +
Preference number: 6 (lower is better)
Translates to: PMALSDSTVLAK*VLWISGTLVVS
Trigger: GCTGACCACCAACGTGCCGGAAATCCAGAGAACCAACTTAGCAAGCACAGTGCTGTCACTCAAGGCCATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000650571.1
CDS CAA 90 bp TGTTTGATCTCCCACTTCTCTGGGTCAGAGATTCGGGTGAGGCGCTaGCGTTCCAGTGAGTCGTCCTCTACTTCAGGAGCACTGACAAGG +
Preference number: 6 (lower is better)
Translates to: CLISHFSGSEIRVRR*RSSESSSTSGALTR
Trigger: CCTTGTCAGTGCTCCTGAAGTAGAGGACGACTCACTGGAACGCAAGCGCCTCACCCGAATCTCTGACCCAGAGAAGTGGGAGATCAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 90 bp GCAATCTGTCTGCCTTCCGCATCAGGCAGAGGGTCAACCCAGTGTTaGTTGAGTCCCATGGGAATAGAATCCATCTCAGCTTCCCGCTGG +
Preference number: 6 (lower is better)
Translates to: AICLPSASGRGSTQC*LSPMGIESISASRW
Trigger: CCAGCGGGAAGCTGAGATGGATTCTATTCCCATGGGACTCAACAAACACTGGGTTGACCCTCTGCCTGATGCGGAAGGCAGACAGATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 90 bp ACAAGCCACCGAGGGTCGATGGTGGTAACTTCACGCATGTATTCCTaGGTGGTGAGCACCAGCTCATGGTACACCACCCATTCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: TSHRGSMVVTSRMYS*VVSTSSWYTTHSGC
Trigger: ACAGCCAGAATGGGTGGTGTACCATGAGCTGGTGCTCACCACCAAGGAATACATGCGTGAAGTTACCACCATCGACCCTCGGTGGCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS CAA 90 bp AGTCCAAGCCCTGGCTACTGCTGCTGGAGAGGCAAAGGAACAATCTaGCCTTTCAGCGCCGTCGGAAAGCTCGAGATATTCTCCAGGCAT +
Preference number: 6 (lower is better)
Translates to: SPSPGYCCWRGKGTI*PFSAVGKLEIFSRH
Trigger: ATGCCTGGAGAATATCTCGAGCTTTCCGACGGCGCTGAAAGGCAAGATTGTTCCTTTGCCTCTCCAGCAGCAGTAGCCAGGGCTTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS TCA 72 bp CTTCCTCAGGAAAAGAAGTTCAGGCCTCCCACAACATaGGGAGTCTGGTGTGACTGCAGCGTAGGATCCACG +
Preference number: 6 (lower is better)
Translates to: LPQEKKFRPPTT*GVWCDCSVGST
Trigger: CGTGGATCCTACGCTGCAGTCACACCAGACTCCTCATGTTGTGGGAGGCCTGAACTTCTTTTCCTGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588996.1
CDS GCA 72 bp CACTGCAGATGGCCTTCTGCACTCGGACTGTGGACTTaGCACAGGAAACAACATCCAGCTTGTGTCTGTCCA +
Preference number: 6 (lower is better)
Translates to: HCRWPSALGLWT*HRKQHPACVCP
Trigger: TGGACAGACACAAGCTGGATGTTGTTTCCTGTGGCAAGTCCACAGTCCGAGTGCAGAAGGCCATCTGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000589898.1
ENST00000650571.1
CDS GCA 72 bp GCAGCATTACGGAAGAACCCACTGCAGATGGCCTTCTaGACTCGGACTGTGGACTTGCCACAGGAAACAACA +
Preference number: 6 (lower is better)
Translates to: AALRKNPLQMAF*TRTVDLPQETT
Trigger: TGTTGTTTCCTGTGGCAAGTCCACAGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCCGTAATGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000589898.1
ENST00000650571.1
CDS CCA 72 bp GAACGTGATCGAGAGCGGGATCGGTGTCTCCGCTTGTaGTCTCTATCTCGGTTTCGTTCCCTATCTCTGTCT +
Preference number: 6 (lower is better)
Translates to: ERDRERDRCLRL*SLSRFRSLSLS
Trigger: AGACAGAGATAGGGAACGAAACCGAGATAGAGACCACAAGCGGAGACACCGATCCCGCTCTCGATCACGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 72 bp AGTCCCATGGGAATAGAATCCATCTCAGCTTCCCGCTaGGCCTGTTTGAGTTCCCGCCTTTCTTTGGCCAAG +
Preference number: 6 (lower is better)
Translates to: SPMGIESISASR*ACLSSRLSLAK
Trigger: CTTGGCCAAAGAAAGGCGGGAACTCAAACAGGCCCAGCGGGAAGCTGAGATGGATTCTATTCCCATGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 72 bp GGACGGCCTGGACCAATTGCTCCTTCAGTTTGTAGATaGGCAGGCTCTCCCTCTGCTCAAGGATTGACATCT +
Preference number: 6 (lower is better)
Translates to: GRPGPIAPSVCR*AGSPSAQGLTS
Trigger: AGATGTCAATCCTTGAGCAGAGGGAGAGCCTGCCCATCTACAAACTGAAGGAGCAATTGGTCCAGGCCGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 72 bp AGAACCCACTGCAGATGGCCTTCTGCACTCGGACTGTaGACTTGCCACAGGAAACAACATCCAGCTTGTGTC +
Preference number: 6 (lower is better)
Translates to: RTHCRWPSALGL*TCHRKQHPACV
Trigger: GACACAAGCTGGATGTTGTTTCCTGTGGCAAGTCCACAGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000589898.1
ENST00000650571.1
CDS CCA 72 bp CTGTCATCGATAAGTCCAAGCCCTGGCTACTGCTGCTaGAGAGGCAAAGGAACAATCTTGCCTTTCAGCGCC +
Preference number: 6 (lower is better)
Translates to: LSSISPSPGYCC*RGKGTILPFSA
Trigger: GGCGCTGAAAGGCAAGATTGTTCCTTTGCCTCTCCAGCAGCAGTAGCCAGGGCTTGGACTTATCGATGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS CAA 72 bp CTCAGGCTGGTCTTGGTCCCAGTGAAGGACAGCACTTaGACTTTGACCCTCTGGCCTTTGCTCACGACATCA +
Preference number: 6 (lower is better)
Translates to: LRLVLVPVKDST*TLTLWPLLTTS
Trigger: TGATGTCGTGAGCAAAGGCCAGAGGGTCAAAGTCAAAGTGCTGTCCTTCACTGGGACCAAGACCAGCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 72 bp CGAGGGTCGATGGTGGTAACTTCACGCATGTATTCCTaGGTGGTGAGCACCAGCTCATGGTACACCACCCAT +
Preference number: 6 (lower is better)
Translates to: RGSMVVTSRMYS*VVSTSSWYTTH
Trigger: ATGGGTGGTGTACCATGAGCTGGTGCTCACCACCAAGGAATACATGCGTGAAGTTACCACCATCGACCCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS CAA 72 bp CCTGGCTACTGCTGCTGGAGAGGCAAAGGAACAATCTaGCCTTTCAGCGCCGTCGGAAAGCTCGAGATATTC +
Preference number: 6 (lower is better)
Translates to: PGYCCWRGKGTI*PFSAVGKLEIF
Trigger: GAATATCTCGAGCTTTCCGACGGCGCTGAAAGGCAAGATTGTTCCTTTGCCTCTCCAGCAGCAGTAGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS CAA 90 bp ATGCTCAGGCTGGTCTTGGTCCCAGTGAAGGACAGCACTTTGACTTaGACCCTCTGGCCTTTGCTCACGACATCAGCTACATTGGCCACA +
Preference number: 6 (lower is better)
Translates to: MLRLVLVPVKDSTLT*TLWPLLTTSATLAT
Trigger: TGTGGCCAATGTAGCTGATGTCGTGAGCAAAGGCCAGAGGGTCAAAGTCAAAGTGCTGTCCTTCACTGGGACCAAGACCAGCCTGAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 90 bp GAGTTCCCGCCTTTCTTTGGCCAAGGCACTCTGCATCATTGCTGCTaGGGAGAGGGAGCCGTCTGGGTTCTTGACAATTTTAATGGGGCT +
Preference number: 6 (lower is better)
Translates to: EFPPFFGQGTLHHCC*GEGAVWVLDNFNGA
Trigger: AGCCCCATTAAAATTGTCAAGAACCCAGACGGCTCCCTCTCCCAAGCAGCAATGATGCAGAGTGCCTTGGCCAAAGAAAGGCGGGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 90 bp AGTCCCATGGGAATAGAATCCATCTCAGCTTCCCGCTGGGCCTGTTaGAGTTCCCGCCTTTCTTTGGCCAAGGCACTCTGCATCATTGCT +
Preference number: 6 (lower is better)
Translates to: SPMGIESISASRWAC*SSRLSLAKALCIIA
Trigger: AGCAATGATGCAGAGTGCCTTGGCCAAAGAAAGGCGGGAACTCAAACAGGCCCAGCGGGAAGCTGAGATGGATTCTATTCCCATGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 90 bp CGGAAGAACCCACTGCAGATGGCCTTCTGCACTCGGACTGTGGACTaGCCACAGGAAACAACATCCAGCTTGTGTCTGTCCATTATGCCT +
Preference number: 6 (lower is better)
Translates to: RKNPLQMAFCTRTVD*PQETTSSLCLSIMP
Trigger: AGGCATAATGGACAGACACAAGCTGGATGTTGTTTCCTGTGGCAAGTCCACAGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000589898.1
ENST00000650571.1
CDS TCA 72 bp TGCGTTCCAGTGAGTCGTCCTCTACTTCAGGAGCACTaGCAAGGGACAAGTGAGTGGGTCTATCAGGATTCC +
Preference number: 6 (lower is better)
Translates to: CVPVSRPLLQEH*QGTSEWVYQDS
Trigger: GGAATCCTGATAGACCCACTCACTTGTCCCTTGTCAGTGCTCCTGAAGTAGAGGACGACTCACTGGAACGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS TCA 72 bp TGTTGTTCTTCCAGGAGTTGTACACAGCTAGCAGGGTaGGGTGGTCCCCTTCAGTCTGGTGGAATTTGGCCT +
Preference number: 6 (lower is better)
Translates to: CCSSRSCTQLAG*GGPLQSGGIWP
Trigger: AGGCCAAATTCCACCAGACTGAAGGGGACCACCTCACCCTGCTAGCTGTGTACAACTCCTGGAAGAACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000589898.1
ENST00000650571.1
CDS TCA 72 bp CCAGCTCATGGTACACCACCCATTCTGGCTGTCTGTTaGAGAGGGCACTGGAAGGATGGATATAGACCACCT +
Preference number: 6 (lower is better)
Translates to: PAHGTPPILAVC*RGHWKDGYRPP
Trigger: AGGTGGTCTATATCCATCCTTCCAGTGCCCTCTTCAACAGACAGCCAGAATGGGTGGTGTACCATGAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS CCA 72 bp AGCGCCGTCGGAAAGCTCGAGATATTCTCCAGGCATTaGGTTCCTCATAGCGGTTGTACAAGGGTTCAAGAC +
Preference number: 6 (lower is better)
Translates to: SAVGKLEIFSRH*VPHSGCTRVQD
Trigger: GTCTTGAACCCTTGTACAACCGCTATGAGGAACCCAATGCCTGGAGAATATCTCGAGCTTTCCGACGGCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS CCA 72 bp CAGGGTAGCATCAGTGTCGGGGGAAACGCCATCAGCTaGGAAATTACTCATACAGCTCCTCCTGCCAAAAGA +
Preference number: 6 (lower is better)
Translates to: QGSISVGGNAIS*EITHTAPPAKR
Trigger: TCTTTTGGCAGGAGGAGCTGTATGAGTAATTTCCCAGCTGATGGCGTTTCCCCCGACACTGATGCTACCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587044.1
CDS CCA 72 bp GAAGCTCTGCTTACCTTTGCTAGTGGAAGGCTTCGCTaGAGGCCGCATGGTTTGTATGAGACGCAGCAAGTT +
Preference number: 6 (lower is better)
Translates to: EALLTFASGRLR*RPHGLYETQQV
Trigger: AACTTGCTGCGTCTCATACAAACCATGCGGCCTCCAGCGAAGCCTTCCACTAGCAAAGGTAAGCAGAGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605777.1
CDS CAA 72 bp CTGGTCTTGGTCCCAGTGAAGGACAGCACTTTGACTTaGACCCTCTGGCCTTTGCTCACGACATCAGCTACA +
Preference number: 6 (lower is better)
Translates to: LVLVPVKDSTLT*TLWPLLTTSAT
Trigger: TGTAGCTGATGTCGTGAGCAAAGGCCAGAGGGTCAAAGTCAAAGTGCTGTCCTTCACTGGGACCAAGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 72 bp GTGGGTCTATCAGGATTCCGCATTGAGGTCTCCTCATaGGTCTCCCCGACAAGATTTCGCCGTCTATTTGGG +
Preference number: 6 (lower is better)
Translates to: VGLSGFRIEVSS*VSPTRFRRLFG
Trigger: CCCAAATAGACGGCGAAATCTTGTCGGGGAGACCAATGAGGAGACCTCAATGCGGAATCCTGATAGACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 72 bp CCTTCCGCATCAGGCAGAGGGTCAACCCAGTGTTTGTaGAGTCCCATGGGAATAGAATCCATCTCAGCTTCC +
Preference number: 6 (lower is better)
Translates to: PSASGRGSTQCL*SPMGIESISAS
Trigger: GGAAGCTGAGATGGATTCTATTCCCATGGGACTCAACAAACACTGGGTTGACCCTCTGCCTGATGCGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 72 bp CTGCCTTCCGCATCAGGCAGAGGGTCAACCCAGTGTTaGTTGAGTCCCATGGGAATAGAATCCATCTCAGCT +
Preference number: 6 (lower is better)
Translates to: LPSASGRGSTQC*LSPMGIESISA
Trigger: AGCTGAGATGGATTCTATTCCCATGGGACTCAACAAACACTGGGTTGACCCTCTGCCTGATGCGGAAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 72 bp CACCATGGGTTGGAGAACTTGTTGTTCTTCCAGGAGTaGTACACAGCTAGCAGGGTGAGGTGGTCCCCTTCA +
Preference number: 6 (lower is better)
Translates to: HHGLENLLFFQE*YTASRVRWSPS
Trigger: TGAAGGGGACCACCTCACCCTGCTAGCTGTGTACAACTCCTGGAAGAACAACAAGTTCTCCAACCCATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000589898.1
ENST00000650571.1
CDS CAA 90 bp TCCTTCATGCTCAGGCTGGTCTTGGTCCCAGTGAAGGACAGCACTTaGACTTTGACCCTCTGGCCTTTGCTCACGACATCAGCTACATTG +
Preference number: 6 (lower is better)
Translates to: SFMLRLVLVPVKDST*TLTLWPLLTTSATL
Trigger: CAATGTAGCTGATGTCGTGAGCAAAGGCCAGAGGGTCAAAGTCAAAGTGCTGTCCTTCACTGGGACCAAGACCAGCCTGAGCATGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 90 bp TTCCACTCAGGAATATCATTGGGCATCATCCCAATACCCCTCATGTaGGCAGCAATCTGTCTGCCTTCCGCATCAGGCAGAGGGTCAACC +
Preference number: 6 (lower is better)
Translates to: FHSGISLGIIPIPLM*AAICLPSASGRGST
Trigger: GGTTGACCCTCTGCCTGATGCGGAAGGCAGACAGATTGCTGCCAACATGAGGGGTATTGGGATGATGCCCAATGATATTCCTGAGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS TCA 72 bp CTCTCATGTGCCTCGTCCAACATGATGATCGCGTACTaGGTGAGGTCAGGGTCAATCAAGCACTCTCTAAGC +
Preference number: 6 (lower is better)
Translates to: LSCASSNMMIAY*VRSGSIKHSLS
Trigger: GCTTAGAGAGTGCTTGATTGACCCTGACCTCACTCAGTACGCGATCATCATGTTGGACGAGGCACATGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 72 bp TGGGTCTATCAGGATTCCGCATTGAGGTCTCCTCATTaGTCTCCCCGACAAGATTTCGCCGTCTATTTGGGT +
Preference number: 6 (lower is better)
Translates to: WVYQDSALRSPH*SPRQDFAVYLG
Trigger: ACCCAAATAGACGGCGAAATCTTGTCGGGGAGACCAATGAGGAGACCTCAATGCGGAATCCTGATAGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 72 bp GAATATCATTGGGCATCATCCCAATACCCCTCATGTTaGCAGCAATCTGTCTGCCTTCCGCATCAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: EYHWASSQYPSC*QQSVCLPHQAE
Trigger: CTCTGCCTGATGCGGAAGGCAGACAGATTGCTGCCAACATGAGGGGTATTGGGATGATGCCCAATGATATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 72 bp TGCTTGCTAAGTTGGTTCTCTGGATTTCCGGCACGTTaGTGGTCAGCATTTCATCTCGGTAGGCACGTTCTG +
Preference number: 6 (lower is better)
Translates to: CLLSWFSGFPAR*WSAFHLGRHVL
Trigger: CAGAACGTGCCTACCGAGATGAAATGCTGACCACCAACGTGCCGGAAATCCAGAGAACCAACTTAGCAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 72 bp CAAGGGACAAGTGAGTGGGTCTATCAGGATTCCGCATaGAGGTCTCCTCATTGGTCTCCCCGACAAGATTTC +
Preference number: 6 (lower is better)
Translates to: QGTSEWVYQDSA*RSPHWSPRQDF
Trigger: GAAATCTTGTCGGGGAGACCAATGAGGAGACCTCAATGCGGAATCCTGATAGACCCACTCACTTGTCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 72 bp CCTTTCTTTGGCCAAGGCACTCTGCATCATTGCTGCTaGGGAGAGGGAGCCGTCTGGGTTCTTGACAATTTT +
Preference number: 6 (lower is better)
Translates to: PFFGQGTLHHCC*GEGAVWVLDNF
Trigger: AAAATTGTCAAGAACCCAGACGGCTCCCTCTCCCAAGCAGCAATGATGCAGAGTGCCTTGGCCAAAGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 72 bp GGAATATCATTGGGCATCATCCCAATACCCCTCATGTaGGCAGCAATCTGTCTGCCTTCCGCATCAGGCAGA +
Preference number: 6 (lower is better)
Translates to: GISLGIIPIPLM*AAICLPSASGR
Trigger: TCTGCCTGATGCGGAAGGCAGACAGATTGCTGCCAACATGAGGGGTATTGGGATGATGCCCAATGATATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 90 bp GCCGTCTGGGTTCTTGACAATTTTAATGGGGCTCATGTCCATGCTTaGCTTAGTGTGCCCTCTCAGGAATGGAGGCTCTTCCTCAACCAA +
Preference number: 6 (lower is better)
Translates to: AVWVLDNFNGAHVHA*LSVPSQEWRLFLNQ
Trigger: TTGGTTGAGGAAGAGCCTCCATTCCTGAGAGGGCACACTAAGCAAAGCATGGACATGAGCCCCATTAAAATTGTCAAGAACCCAGACGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 90 bp CACAGAGCAGAGGGCAAAGTAAATAAACTTGCCCAAAGTCGCAGTTaGGAGCTGAAGTCCAAGCCACAGATGCCTCTCTGTTGGCACTTC +
Preference number: 6 (lower is better)
Translates to: HRAEGKVNKLAQSRS*ELKSKPQMPLCWHF
Trigger: GAAGTGCCAACAGAGAGGCATCTGTGGCTTGGACTTCAGCTCCAAACTGCGACTTTGGGCAAGTTTATTTACTTTGCCCTCTGCTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587044.1
CDS TCA 72 bp AAAACCGTGAGTAGAGGTCCCATTCTGGCTGTCTGTTaGAGAGGGCACTGGAAGGATGGATATAGACCACCT +
Preference number: 6 (lower is better)
Translates to: KTVSRGPILAVC*RGHWKDGYRPP
Trigger: AGGTGGTCTATATCCATCCTTCCAGTGCCCTCTTCAACAGACAGCCAGAATGGGACCTCTACTCACGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589898.1
CDS CCA 72 bp CTTTCTTTGGCCAAGGCACTCTGCATCATTGCTGCTTaGGAGAGGGAGCCGTCTGGGTTCTTGACAATTTTA +
Preference number: 6 (lower is better)
Translates to: LSLAKALCIIAA*EREPSGFLTIL
Trigger: TAAAATTGTCAAGAACCCAGACGGCTCCCTCTCCCAAGCAGCAATGATGCAGAGTGCCTTGGCCAAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 72 bp TTGCTAAGTTGGTTCTCTGGATTTCCGGCACGTTGGTaGTCAGCATTTCATCTCGGTAGGCACGTTCTGTGT +
Preference number: 6 (lower is better)
Translates to: LLSWFSGFPARW*SAFHLGRHVLC
Trigger: ACACAGAACGTGCCTACCGAGATGAAATGCTGACCACCAACGTGCCGGAAATCCAGAGAACCAACTTAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 72 bp ATTTCTACCTTGAGTGACAGCACTGTGCTTGCTAAGTaGGTTCTCTGGATTTCCGGCACGTTGGTGGTCAGC +
Preference number: 6 (lower is better)
Translates to: ISTLSDSTVLAK*VLWISGTLVVS
Trigger: GCTGACCACCAACGTGCCGGAAATCCAGAGAACCAACTTAGCAAGCACAGTGCTGTCACTCAAGGTAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587044.1
CDS TCA 72 bp GATCCCCAAGTGATTGTCCAGCTCAGTGCAAACCTTTaGCACCAAAGACAGGTACTCGAGTTTGGCAAGTTC +
Preference number: 6 (lower is better)
Translates to: DPQVIVQLSANL*HQRQVLEFGKF
Trigger: GAACTTGCCAAACTCGAGTACCTGTCTTTGGTGTCAAAGGTTTGCACTGAGCTGGACAATCACTTGGGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000592258.5
ENST00000650571.1
CDS TCA 72 bp TTTCCAGATCCTGTCTCACCAATGACAATCAGGATCTaGTTGTCATGGACGGCCTGGACCAATTGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: FPDPVSPMTIRI*LSWTAWTNCSF
Trigger: GAAGGAGCAATTGGTCCAGGCCGTCCATGACAATCAGATCCTGATTGTCATTGGTGAGACAGGATCTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS GCA 72 bp ACAATAACAACCAATGCTTATTGGGCATTTACTAGGTaGCTTCCAGACAGGAAAGGCACATGCCCTGCCCTC +
Preference number: 6 (lower is better)
Translates to: TITTNAYWAFTR*LPDRKGTCPAL
Trigger: GAGGGCAGGGCATGTGCCTTTCCTGTCTGGAAGGCACCTAGTAAATGCCCAATAAGCATTGGTTGTTATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588996.1
CDS CCA 72 bp CATGTCCATGCTTTGCTTAGTGTGCCCTCTCAGGAATaGAGGCTCTTCCTCAACCAATTCAATCTCAAGGTC +
Preference number: 6 (lower is better)
Translates to: HVHALLSVPSQE*RLFLNQFNLKV
Trigger: GACCTTGAGATTGAATTGGTTGAGGAAGAGCCTCCATTCCTGAGAGGGCACACTAAGCAAAGCATGGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 90 bp TTGAGGTCTCCTCATTGGTCTCCCCGACAAGATTTCGCCGTCTATTaGGGTTTAGATCTTCTCCAGTCTCTTGATCCACATCCTTCATGC +
Preference number: 6 (lower is better)
Translates to: LRSPHWSPRQDFAVY*GLDLLQSLDPHPSC
Trigger: GCATGAAGGATGTGGATCAAGAGACTGGAGAAGATCTAAACCCAAATAGACGGCGAAATCTTGTCGGGGAGACCAATGAGGAGACCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 90 bp AACTGGATCTTTGCTAGTGGAAGGCTTCGCTGGAGGCCGCATGGTTaGTATGAGACGCAGCAAGTTACTAATAAGAGAATCCAAGGTCCT +
Preference number: 6 (lower is better)
Translates to: NWIFASGRLRWRPHG*YETQQVTNKRIQGP
Trigger: AGGACCTTGGATTCTCTTATTAGTAACTTGCTGCGTCTCATACAAACCATGCGGCCTCCAGCGAAGCCTTCCACTAGCAAAGATCCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592258.5
CDS CAA 90 bp CTGCTTACCTTTGCTAGTGGAAGGCTTCGCTGGAGGCCGCATGGTTaGTATGAGACGCAGCAAGTTACTAATAAGAGAATCCGTAAATTC +
Preference number: 6 (lower is better)
Translates to: LLTFASGRLRWRPHG*YETQQVTNKRIRKF
Trigger: GAATTTACGGATTCTCTTATTAGTAACTTGCTGCGTCTCATACAAACCATGCGGCCTCCAGCGAAGCCTTCCACTAGCAAAGGTAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605777.1
CDS TCA 72 bp ATTGAGAAAACTTCACTGCATCCAAGGTGGCTGAGGTaGCAATCAGCTTCATGTCCTGCCGTTTCTGAACTG +
Preference number: 6 (lower is better)
Translates to: IEKTSLHPRWLR*QSASCPAVSEL
Trigger: CAGTTCAGAAACGGCAGGACATGAAGCTGATTGTCACCTCAGCCACCTTGGATGCAGTGAAGTTTTCTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS TCA 72 bp GAAGTATTGAGAAAACTTCACTGCATCCAAGGTGGCTaGGGTGACAATCAGCTTCATGTCCTGCCGTTTCTG +
Preference number: 6 (lower is better)
Translates to: EVLRKLHCIQGG*GDNQLHVLPFL
Trigger: CAGAAACGGCAGGACATGAAGCTGATTGTCACCTCAGCCACCTTGGATGCAGTGAAGTTTTCTCAATACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS GCA 72 bp ATTTTAATGGGGCTCATGTCCATGCTTTGCTTAGTGTaGCCTCTCAGGAATGGAGGCTCTTCCTCAACCAAT +
Preference number: 6 (lower is better)
Translates to: ILMGLMSMLCLV*PLRNGGSSSTN
Trigger: ATTGGTTGAGGAAGAGCCTCCATTCCTGAGAGGGCACACTAAGCAAAGCATGGACATGAGCCCCATTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS GCA 72 bp TTCTTGACAATTTTAATGGGGCTCATGTCCATGCTTTaGTTAGTGTGCCCTCTCAGGAATGGAGGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: FLTILMGLMSML*LVCPLRNGGSS
Trigger: GGAAGAGCCTCCATTCCTGAGAGGGCACACTAAGCAAAGCATGGACATGAGCCCCATTAAAATTGTCAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 72 bp CAGCTGCTCCATGGCTGTGATCAAAGTTTCCATAGGTaGGGCATCCATGAAATCAAAGGACAGCAGATCATT +
Preference number: 6 (lower is better)
Translates to: QLLHGCDQSFHR*GIHEIKGQQII
Trigger: AATGATCTGCTGTCCTTTGATTTCATGGATGCCCCACCTATGGAAACTTTGATCACAGCCATGGAGCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 72 bp CAGGGAACGAGCCTGGATAAAGTTCTCATAGCACCATaGGTTGGAGAACTTGTTGTTCTTCCAGGAGTTGTA +
Preference number: 6 (lower is better)
Translates to: QGTSLDKVLIAP*VGELVVLPGVV
Trigger: TACAACTCCTGGAAGAACAACAAGTTCTCCAACCCATGGTGCTATGAGAACTTTATCCAGGCTCGTTCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000589898.1
ENST00000650571.1
CDS CAA 72 bp TTTGCTAGTGGAAGGCTTCGCTGGAGGCCGCATGGTTaGTATGAGACGCAGCAAGTTACTAATAAGAGAATC +
Preference number: 6 (lower is better)
Translates to: FASGRLRWRPHG*YETQQVTNKRI
Trigger: GATTCTCTTATTAGTAACTTGCTGCGTCTCATACAAACCATGCGGCCTCCAGCGAAGCCTTCCACTAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000592258.5
ENST00000605777.1
ENST00000650571.1
CDS CAA 72 bp CCTCATTGGTCTCCCCGACAAGATTTCGCCGTCTATTaGGGTTTAGATCTTCTCCAGTCTCTTGATCCACAT +
Preference number: 6 (lower is better)
Translates to: PHWSPRQDFAVY*GLDLLQSLDPH
Trigger: ATGTGGATCAAGAGACTGGAGAAGATCTAAACCCAAATAGACGGCGAAATCTTGTCGGGGAGACCAATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 72 bp GTTCTTGACAATTTTAATGGGGCTCATGTCCATGCTTaGCTTAGTGTGCCCTCTCAGGAATGGAGGCTCTTC +
Preference number: 6 (lower is better)
Translates to: VLDNFNGAHVHA*LSVPSQEWRLF
Trigger: GAAGAGCCTCCATTCCTGAGAGGGCACACTAAGCAAAGCATGGACATGAGCCCCATTAAAATTGTCAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 90 bp AACTGGATCTTTGCTAGTGGAAGGCTTCGCTGGAGGCCGCATGGTTaGTATGAGACGCAGCAAGTTACTAATAAGAGAATCCGTAAATTC +
Preference number: 6 (lower is better)
Translates to: NWIFASGRLRWRPHG*YETQQVTNKRIRKF
Trigger: GAATTTACGGATTCTCTTATTAGTAACTTGCTGCGTCTCATACAAACCATGCGGCCTCCAGCGAAGCCTTCCACTAGCAAAGATCCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000650571.1
CDS TCA 72 bp ACAAATTCAGCAAGGTCCTTGTCGTTGATCCCCAAGTaGTTGTCCAGCTCAGTGCAAACCTTTGACACCAAA +
Preference number: 6 (lower is better)
Translates to: TNSARSLSLIPK*LSSSVQTFDTK
Trigger: TTTGGTGTCAAAGGTTTGCACTGAGCTGGACAATCACTTGGGGATCAACGACAAGGACCTTGCTGAATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000650571.1
CDS TCA 72 bp GAAATTACTCATACAGCTCCTCCTGCCAAAAGAGAATaGAGTCCTCACTGGGGACTGAGAGAGGAAGAACAA +
Preference number: 6 (lower is better)
Translates to: EITHTAPPAKRE*SPHWGLREEEQ
Trigger: TTGTTCTTCCTCTCTCAGTCCCCAGTGAGGACTTCATTCTCTTTTGGCAGGAGGAGCTGTATGAGTAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587044.1
CDS GCA 72 bp CACATAGTAGATACCATCAATAGTCAGCGATGTCTCTaGGATATTGGTGGCAATCACAACCTTTCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: HIVDTINSQRCL*DIGGNHNLSAA
Trigger: GGCAGCAGAAAGGTTGTGATTGCCACCAATATCGCAGAGACATCGCTGACTATTGATGGTATCTACTATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 72 bp ATCTGTCTCAGGTTCCTTTGTGTACAGTATTTCCACTaGATATGTTCGACCTGGGATGGTGAAAATGGGAGC +
Preference number: 6 (lower is better)
Translates to: ICLRFLCVQYFH*ICSTWDGENGS
Trigger: GCTCCCATTTTCACCATCCCAGGTCGAACATATCCAGTGGAAATACTGTACACAAAGGAACCTGAGACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CAA 72 bp TCAGGCTGGCATCCAGATAATCTGTCTCAGGTTCCTTaGTGTACAGTATTTCCACTGGATATGTTCGACCTG +
Preference number: 6 (lower is better)
Translates to: SGWHPDNLSQVP*CTVFPLDMFDL
Trigger: CAGGTCGAACATATCCAGTGGAAATACTGTACACAAAGGAACCTGAGACAGATTATCTGGATGCCAGCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS TCA 72 bp CAAGTTACTAATAAGAGAATCCAAGGTCCTTGTCGTTaGTCCCCAAGTGATTGTCCAGCTCAGTGCAAACCT +
Preference number: 6 (lower is better)
Translates to: QVTNKRIQGPCR*SPSDCPAQCKP
Trigger: AGGTTTGCACTGAGCTGGACAATCACTTGGGGATCAACGACAAGGACCTTGGATTCTCTTATTAGTAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592258.5
CDS TCA 72 bp GGGTTTTCTCTCGTTCTAAAAGAACAGAATTGGATCTaGGCGCTAAAGTGGTTGAGGTTAGGTGTGTGTGTC +
Preference number: 6 (lower is better)
Translates to: GFSLVLKEQNWI*ALKWLRLGVCV
Trigger: GACACACACACCTAACCTCAACCACTTTAGCGCTCAGATCCAATTCTGTTCTTTTAGAACGAGAGAAAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587044.1
CDS CAA 72 bp TTGTACAAGGGTTCAAGACGCTGTTGCTTCTTCTGTTaGCTTAGCTTAGTTGGGTCTGAGACCTTGAAGAAG +
Preference number: 6 (lower is better)
Translates to: LYKGSRRCCFFC*LSLVGSETLKK
Trigger: CTTCTTCAAGGTCTCAGACCCAACTAAGCTAAGCAAACAGAAGAAGCAACAGCGTCTTGAACCCTTGTACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262415.8
ENST00000650571.1
CDS CAA 90 bp TTAGGGAGAATGCCAGTCTCTTCATCAAAGTCTGGAAATTCTTCTTaGGAAAGGACATTGGCAGCAATCATCTGTTTGATCTCCCACTTC +
Preference number: 6 (lower is better)
Translates to: LGRMPVSSSKSGNSS*ERTLAAIICLISHF
Trigger: GAAGTGGGAGATCAAACAGATGATTGCTGCCAATGTCCTTTCCAAAGAAGAATTTCCAGACTTTGATGAAGAGACTGGCATTCTCCCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 72 bp CTTTGTGTACAGTATTTCCACTGGATATGTTCGACCTaGGATGGTGAAAATGGGAGCTTCATAGAAGTATTG +
Preference number: 6 (lower is better)
Translates to: LCVQYFHWICST*DGENGSFIEVL
Trigger: CAATACTTCTATGAAGCTCCCATTTTCACCATCCCAGGTCGAACATATCCAGTGGAAATACTGTACACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000587044.1
ENST00000650571.1
CDS CCA 72 bp GGGAATGTAAGATGTTGCAGCCACTGTAGAAAAGTTTaGTGGTTCCTTAATAGGCTAAATACAGAATTAGCA +
Preference number: 6 (lower is better)
Translates to: GNVRCCSHCRKV*WFLNRLNTELA
Trigger: TGCTAATTCTGTATTTAGCCTATTAAGGAACCACCAAACTTTTCTACAGTGGCTGCAACATCTTACATTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587044.1
CDS GCA 72 bp TGTTATCACAGCCATTTGCATTTCACTCAAAGGGACTaGTTTCATGAGGTTACTAAAGTATTTAACAAGGTT +
Preference number: 6 (lower is better)
Translates to: CYHSHLHFTQRD*FHEVTKVFNKV
Trigger: AACCTTGTTAAATACTTTAGTAACCTCATGAAAGCAGTCCCTTTGAGTGAAATGCAAATGGCTGTGATAACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587044.1
CDS GCA 72 bp ACTATGATGAATTATGTTAGCAATCATCAAGCACTGTaGCAAGTGCCTTTACCTACATTATCTCACTTATCT +
Preference number: 6 (lower is better)
Translates to: TMMNYVSNHQAL*QVPLPTLSHLS
Trigger: AGATAAGTGAGATAATGTAGGTAAAGGCACTTGGCACAGTGCTTGATGATTGCTAACATAATTCATCATAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587044.1
CDS CAA 72 bp TTACTAATAAGAGAATCCGTAAATTCTGCACCATTTTaGACGAGAGAAGCCTTAAAAGTATCAAAGGTGGTA +
Preference number: 6 (lower is better)
Translates to: LLIRESVNSAPF*TREALKVSKVV
Trigger: TACCACCTTTGATACTTTTAAGGCTTCTCTCGTCAAAAATGGTGCAGAATTTACGGATTCTCTTATTAGTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262415.8
ENST00000540306.5
ENST00000605777.1
ENST00000650571.1