RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DHX57 (Homo sapiens)

Ensembl gene IDs: ENSG00000163214

Ensembl transcript IDs: ENST00000442331.1, ENST00000452978.5, ENST00000457308.6, ENST00000474104.5, ENST00000479345.2, ENST00000492042.1, ENST00000497514.2, ENST00000619207.1, ENST00000620517.4, ENST00000622155.4

Found 547 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGTTTGCCTCTTCTCCTGTGGCATCTAAGACACCATCTCCTCCTTaGGCCCTTTTCTCAATTTCCCTTGCTCTGAGCCCTTCCCTTGCA +
Preference number: 1 (lower is better)
Translates to: EFASSPVASKTPSPP*ALFSISLALSPSLA
Trigger: TGCAAGGGAAGGGCTCAGAGCAAGGGAAATTGAGAAAAGGGCCCAAGGAGGAGATGGTGTCTTAGATGCCACAGGAGAAGAGGCAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR TCA 90 bp GATGCAACACGGCCTGCTCGGCCTTTCCTTTGTAGAGCATTAGCTTaGGATACAAAGGTGTCCTCTAGACTTTCCATCCCTTTGCTGGCA +
Preference number: 1 (lower is better)
Translates to: DATRPARPFLCRALA*DTKVSSRLSIPLLA
Trigger: TGCCAGCAAAGGGATGGAAAGTCTAGAGGACACCTTTGTATCTCAAGCTAATGCTCTACAAAGGAAAGGCCGAGCAGGCCGTGTTGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR GCA 90 bp GTGCTGCGGCACTGTCTACTACCTAGCTTTTCCTACTTGCATTTTTaGTCCTGTCCTCTCAGTTCCTTACTCAGGCCTAGAGTGGTTCGT +
Preference number: 1 (lower is better)
Translates to: VLRHCLLPSFSYLHF*SCPLSSLLRPRVVR
Trigger: ACGAACCACTCTAGGCCTGAGTAAGGAACTGAGAGGACAGGAGCAAAAATGCAAGTAGGAAAAGCTAGGTAGTAGACAGTGCCGCAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442331.1
3UTR CCA 90 bp TTAGCAACGCGTTCAGCAACAGAGATTGCAGAGATTCGTCGGGGTTaGGTACAGATGATGTTGGCTACCTTCTCAGGTGGTCCATTCAGA +
Preference number: 1 (lower is better)
Translates to: LATRSATEIAEIRRG*VQMMLATFSGGPFR
Trigger: TCTGAATGGACCACCTGAGAAGGTAGCCAACATCATCTGTACCCAACCCCGACGAATCTCTGCAATCTCTGTTGCTGAACGCGTTGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR CCA 90 bp GCTGATGATCCGGGATCCTCGAGGACACGTACACAGATCAATGCTTaGGTTTTTAATTTTATCCTGGAGAAGCTGATCAAGTTCGCAACG +
Preference number: 1 (lower is better)
Translates to: ADDPGSSRTRTQINA*VFNFILEKLIKFAT
Trigger: CGTTGCGAACTTGATCAGCTTCTCCAGGATAAAATTAAAAACCCAAGCATTGATCTGTGTACGTGTCCTCGAGGATCCCGGATCATCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR TCA 90 bp AACATTAGTTTGCCAATTCTCACATCCACGGGCAGAGAGGCCAAATaGTACCCAAGAGGGGTCAATCTTTCATCTGGAGTTAATGCTCCT +
Preference number: 1 (lower is better)
Translates to: NISLPILTSTGREAK*YPRGVNLSSGVNAP
Trigger: AGGAGCATTAACTCCAGATGAAAGATTGACCCCTCTTGGGTATCATTTGGCCTCTCTGCCCGTGGATGTGAGAATTGGCAAACTAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR CCA 90 bp CTACATTTGGATACAAAGCAGCACACAGCATTGCTGATATCAGCTTaGGGTTCTCAGCATTTGAGTTTGCCTCTTCTCCTGTGGCATCTA +
Preference number: 1 (lower is better)
Translates to: LHLDTKQHTALLISA*GSQHLSLPLLLWHL
Trigger: TAGATGCCACAGGAGAAGAGGCAAACTCAAATGCTGAGAACCCCAAGCTGATATCAGCAATGCTGTGTGCTGCTTTGTATCCAAATGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR TCA 90 bp GCAAGAAGTCACTTTCTTCTGTCCTCTCATGAACTTCATCAACAATaGTATGGGAAACTCCTTGTAGAGCTGTATCTCCTTCTAGCCTTC +
Preference number: 1 (lower is better)
Translates to: ARSHFLLSSHELHQQ*YGKLLVELYLLLAF
Trigger: GAAGGCTAGAAGGAGATACAGCTCTACAAGGAGTTTCCCATATCATTGTTGATGAAGTTCATGAGAGGACAGAAGAAAGTGACTTCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR TCA 90 bp AATGTGTACATATCCATCGTTCTTGGTGACAAACTTCAACTCAGCTaGTTTTGGTTGCATTCTGACAGCTCCAGTACTGGTCTTCTGAAA +
Preference number: 1 (lower is better)
Translates to: NVYISIVLGDKLQLS*FWLHSDSSSTGLLK
Trigger: TTTCAGAAGACCAGTACTGGAGCTGTCAGAATGCAACCAAAATCAGCTGAGTTGAAGTTTGTCACCAAGAACGATGGATATGTACACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR GCA 90 bp CCCTTGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCATACACTGCCTCAGCTaGCTTGGGCTTCATGCCCTG +
Preference number: 2 (lower is better)
Translates to: PLTLQIVLGVAKALLEMAIHCLS*LGLHAL
Trigger: CAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTAT...GGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
3UTR-3UTR GCA 90 bp ATCAAGTTCGCAACGAAGCTCCTTTACCAGTTCAGCCACCTGATGGGAAGCAGCGCAGCACTCCCGTGGTaGAGTATAACAGTCTGGTGG +
Preference number: 2 (lower is better)
Translates to: IKFATKLLYQFSHLMGSSAALPW*SITVWW
Trigger: CCACCAGACTGTTATACTGCACCACGGGAGTGCTGC...GCTGCTTCCCATCAGGTGGCTGAACTGGTAAAGGAGCTTCGTTGCGAACTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR GCA 90 bp CAGACCCCAGATGCAACACGGCCTGCTCGGCCTTTCCTTTGTAGAGCATTAGCTTTCAGCAACAGAGATTaGAGAGATTCGTCGGGGTTG +
Preference number: 2 (lower is better)
Translates to: QTPDATRPARPFLCRALAFSNRD*RDSSGL
Trigger: CAACCCCGACGAATCTCTGCAATCTCTGTTGCTGAA...AGCTAATGCTCTACAAAGGAAAGGCCGAGCAGGCCGTGTTGCATCTGGGGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR CAA 90 bp CTCTCACCCTTGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTaGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCT +
Preference number: 2 (lower is better)
Translates to: LSPLTLQIVLGVAKA*LEMALRVYTLPQLP
Trigger: AGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAAGGGTGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
3UTR-3UTR TCA 90 bp ATCAAGTTCGCAACGAAGCTCCTTTACCAGTTCAGCCACCTGATGGGAAGCAGCCTGGCACTGCATCTTTaGCAGAATCCTGATCCTGGA +
Preference number: 2 (lower is better)
Translates to: IKFATKLLYQFSHLMGSSLALHL*QNPDPG
Trigger: TCCAGGATCAGGATTCTGTCAAAGATGCAGTGCCAG...GCTGCTTCCCATCAGGTGGCTGAACTGGTAAAGGAGCTTCGTTGCGAACTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR TCA 90 bp ATCAAGTTCGCAACGAAGCTCCTTTACCAGTTCAGCCACCTGATGGGAAGCAGCAGCACACAGCATTGCTaGTATCAGCTTGGGGTTCTC +
Preference number: 2 (lower is better)
Translates to: IKFATKLLYQFSHLMGSSSTQHC*YQLGVL
Trigger: GAGAACCCCAAGCTGATATCAGCAATGCTGTGTGCT...GCTGCTTCCCATCAGGTGGCTGAACTGGTAAAGGAGCTTCGTTGCGAACTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR CCA 90 bp ATCAAGTTCGCAACGAAGCTCCTTTACCAGTTCAGCCACCTGATGGGAAGCAGCAGCTGCACATTCACTTaGCCTCCTCCAAACAAGACC +
Preference number: 2 (lower is better)
Translates to: IKFATKLLYQFSHLMGSSSCTFT*PPPNKT
Trigger: GGTCTTGTTTGGAGGAGGCCAAGTGAATGTGCAGCT...GCTGCTTCCCATCAGGTGGCTGAACTGGTAAAGGAGCTTCGTTGCGAACTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR CAA 90 bp TTTAGCAACGCGTTCAGCAACAGAGATTGCAGAGATTCGTCGGGGTaGGGTACAGATGATGTTGGCTACCTTCTCAGGTGGTCCATTCAG +
Preference number: 2 (lower is better)
Translates to: FSNAFSNRDCRDSSG*GTDDVGYLLRWSIQ
Trigger: CTGAATGGACCACCTGAGAAGGTAGCCAACATCATCTGTACCCAACCCCGACGAATCTCTGCAATCTCTGTTGCTGAACGCGTTGCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR CAA 90 bp ATCACAGAGACAAAGACAGGCAAGCTGGGTTTTAGGCTCTCACCCTaGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAA +
Preference number: 2 (lower is better)
Translates to: ITETKTGKLGFRLSP*TLQIVLGVAKALLE
Trigger: TTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAAGGGTGAGAGCCTAAAACCCAGCTTGCCTGTCTTTGTCTCTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
3UTR-3UTR TCA 90 bp ATCAAGTTCGCAACGAAGCTCCTTTACCAGTTCAGCCACCTGATGGGAAGCAGCATCCATCGTTCTTGGTaGCAAACTTCAACTCAGCTG +
Preference number: 2 (lower is better)
Translates to: IKFATKLLYQFSHLMGSSIHRSW*QTSTQL
Trigger: CAGCTGAGTTGAAGTTTGTCACCAAGAACGATGGAT...GCTGCTTCCCATCAGGTGGCTGAACTGGTAAAGGAGCTTCGTTGCGAACTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR GCA 90 bp ACTTGGCCTCCTCCAAACAAGACCAGCGGGTACACAGACACCATGCTGCAGTCTCAAACAACATTAGTTTaGCAATTCTCACATCCACGG +
Preference number: 2 (lower is better)
Translates to: TWPPPNKTSGYTDTMLQSQTTLV*QFSHPR
Trigger: CCGTGGATGTGAGAATTGGCAAACTAATGTTGTTTG...AGACTGCAGCATGGTGTCTGTGTACCCGCTGGTCTTGTTTGGAGGAGGCCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR GCA 90 bp ACTTGGCCTCCTCCAAACAAGACCAGCGGGTACACAGACACCATGCTGCAGTCTGCAGTAATTATAACTTaGACGCACGCCTTCTTTTGT +
Preference number: 2 (lower is better)
Translates to: TWPPPNKTSGYTDTMLQSAVIIT*THAFFC
Trigger: ACAAAAGAAGGCGTGCGTGCAAGTTATAATTACTGC...AGACTGCAGCATGGTGTCTGTGTACCCGCTGGTCTTGTTTGGAGGAGGCCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR CCA 90 bp TGTTTTGACTGGAATTCCAACTCCAAGTGCTGCGGCACTGTCTACTACCTAGCTTACTCAGGCCTAGAGTaGTTCGTGCTCTCAGTGGAA +
Preference number: 2 (lower is better)
Translates to: CFDWNSNSKCCGTVYYLAYSGLE*FVLSVE
Trigger: TTCCACTGAGAGCACGAACCACTCTAGGCCTGAGTA...AGCTAGGTAGTAGACAGTGCCGCAGCACTTGGAGTTGGAATTCCAGTCAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442331.1
3UTR-3UTR CCA 90 bp AATCGTATTTTTGAGGCACGAAGAGAATCGGTGTGTGGAGGTTCAATGAGCCGATCAGCAGCACTCCCGTaGTGCAGTATAACAGTCTGG +
Preference number: 2 (lower is better)
Translates to: NRIFEARRESVCGGSMSRSAALP*CSITVW
Trigger: CCAGACTGTTATACTGCACCACGGGAGTGCTGCTGA...TCGGCTCATTGAACCTCCACACACCGATTCTCTTCGTGCCTCAAAAATACGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR CCA 90 bp CAGACCCCAGATGCAACACGGCCTGCTCGGCCTTTCCTTTGTAGAGCATTAGCTAGACAACATCATCGATaGTTATGGATGTCTCAGCAA +
Preference number: 2 (lower is better)
Translates to: QTPDATRPARPFLCRALARQHHR*LWMSQQ
Trigger: TTGCTGAGACATCCATAACCATCGATGATGTTGTCT...AGCTAATGCTCTACAAAGGAAAGGCCGAGCAGGCCGTGTTGCATCTGGGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR TCA 90 bp ATCAAGTTCGCAACGAAGCTCCTTTACCAGTTCAGCCACCTGATGGGAAGCAGCTTCACTGATGAAGGGTaGATGTGTACATATCCATCG +
Preference number: 2 (lower is better)
Translates to: IKFATKLLYQFSHLMGSSFTDEG*MCTYPS
Trigger: CGATGGATATGTACACATTCACCCTTCATCAGTGAA...GCTGCTTCCCATCAGGTGGCTGAACTGGTAAAGGAGCTTCGTTGCGAACTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR CCA 90 bp TGCGGCACTGTCTACTACCTAGCTTTTCCTACTTGCATTTTTGCTCCTGTCCTCGGTTCGTGCTCTCAGTaGAACTCAGCAGAATGTTTC +
Preference number: 2 (lower is better)
Translates to: CGTVYYLAFPTCIFAPVLGSCSQ*NSAECF
Trigger: GAAACATTCTGCTGAGTTCCACTGAGAGCACGAACC...GAGGACAGGAGCAAAAATGCAAGTAGGAAAAGCTAGGTAGTAGACAGTGCCGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442331.1
3UTR-3UTR CCA 90 bp AAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACGAACTCTCCTCTGGCTAGTGAATAAATaGAAGCAGACCCCAGATGCA +
Preference number: 2 (lower is better)
Translates to: KQLQNGSNHHPGRQRTLLWLVNK*KQTPDA
Trigger: TGCATCTGGGGTCTGCTTCCATTTATTCACTAGCCA...GAGGAGAGTTCGTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR CCA 90 bp AAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACGAACTCTCCTCCACCTGCACTACATTTaGATACAAAGCAGCACACAG +
Preference number: 2 (lower is better)
Translates to: KQLQNGSNHHPGRQRTLLHLHYI*IQSSTQ
Trigger: CTGTGTGCTGCTTTGTATCCAAATGTAGTGCAGGTG...GAGGAGAGTTCGTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR TCA 90 bp CTAGTGAATAAATGGAAGCAGACCCCAGATGCAACACGGCCTGCTCGGCCTTTCGTTCATAAAGCATTTTaGTTTCTGCTAGTCCTGGTA +
Preference number: 2 (lower is better)
Translates to: LVNKWKQTPDATRPARPFVHKAF*FLLVLV
Trigger: TACCAGGACTAGCAGAAATCAAAATGCTTTATGAAC...GAAAGGCCGAGCAGGCCGTGTTGCATCTGGGGTCTGCTTCCATTTATTCACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR GCA 90 bp CACCTGATGGGAAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACTCTTTTGTACTTAGCTaGCATCCCTTATACGCTTGT +
Preference number: 2 (lower is better)
Translates to: HLMGSSYKTDPTIIQGDNSFVLS*HPLYAC
Trigger: ACAAGCGTATAAGGGATGGCAGCTAAGTACAAAAGA...GTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTTCCCATCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR CCA 90 bp CTAGTGAATAAATGGAAGCAGACCCCAGATGCAACACGGCCTGCTCGGCCTTTCTTTCCATCCCTTTGCTaGCATCATATCTCTTTTCTT +
Preference number: 2 (lower is better)
Translates to: LVNKWKQTPDATRPARPFFPSLC*HHISFL
Trigger: AAGAAAAGAGATATGATGCCAGCAAAGGGATGGAAA...GAAAGGCCGAGCAGGCCGTGTTGCATCTGGGGTCTGCTTCCATTTATTCACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR CAA 90 bp ACTACATTTGGATACAAAGCAGCACACAGCATTGCTGATATCAGCTaGGGGTTCTCAGCATTTGAGTTTGCCTCTTCTCCTGTGGCATCT +
Preference number: 2 (lower is better)
Translates to: TTFGYKAAHSIADIS*GFSAFEFASSPVAS
Trigger: AGATGCCACAGGAGAAGAGGCAAACTCAAATGCTGAGAACCCCAAGCTGATATCAGCAATGCTGTGTGCTGCTTTGTATCCAAATGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR CAA 90 bp GGCTTTTCACCTGCACTACATTTGGATACAAAGCAGCACACAGCATaGCTGATATCAGCTTGGGGTTCTCAGCATTTGAGTTTGCCTCTT +
Preference number: 2 (lower is better)
Translates to: GFSPALHLDTKQHTA*LISAWGSQHLSLPL
Trigger: AAGAGGCAAACTCAAATGCTGAGAACCCCAAGCTGATATCAGCAATGCTGTGTGCTGCTTTGTATCCAAATGTAGTGCAGGTGAAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR GCA 90 bp TCTGGAGTTAATGCTCCTAAGTCTCGTAATCGTATTTTTGAGGCACGAAGAGAACAGACCCACCCTCTCTaGTCTTTCTTTAGCAACGCG +
Preference number: 2 (lower is better)
Translates to: SGVNAPKSRNRIFEARREQTHPL*SFFSNA
Trigger: CGCGTTGCTAAAGAAAGAGCAGAGAGGGTGGGTCTG...TTCTCTTCGTGCCTCAAAAATACGATTACGAGACTTAGGAGCATTAACTCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR GCA 90 bp AATCGTATTTTTGAGGCACGAAGAGAATCGGTGTGTGGAGGTTCAATGAGCCGACTGTTGATCTGGCACTaGATCTTTGACAGAATCCTG +
Preference number: 2 (lower is better)
Translates to: NRIFEARRESVCGGSMSRLLIWH*IFDRIL
Trigger: CAGGATTCTGTCAAAGATGCAGTGCCAGATCAACAG...TCGGCTCATTGAACCTCCACACACCGATTCTCTTCGTGCCTCAAAAATACGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR TCA 90 bp AATGCTTGGGTTTTTAATTTTATCCTGGAGAAGCTGATCAAGTTCGCAACGAAGGGGGTTGGGTACAGATaGTGTTGGCTACCTTCTCAG +
Preference number: 2 (lower is better)
Translates to: NAWVFNFILEKLIKFATKGVGYR*CWLPSQ
Trigger: CTGAGAAGGTAGCCAACATCATCTGTACCCAACCCC...CTTCGTTGCGAACTTGATCAGCTTCTCCAGGATAAAATTAAAAACCCAAGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR CAA 90 bp GCAGAACTCTTCCAGACAAGAAGTTTTGTCTGCAGTAATTATAACTaGCACGCACGCCTTCTTTTGTACTTAGCTGCCATCCCTTATACG +
Preference number: 2 (lower is better)
Translates to: AELFQTRSFVCSNYN*HARLLLYLAAIPYT
Trigger: CGTATAAGGGATGGCAGCTAAGTACAAAAGAAGGCGTGCGTGCAAGTTATAATTACTGCAGACAAAACTTCTTGTCTGGAAGAGTTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR CAA 90 bp TTTGAGGCTGGCCATTTCCTGCAGAACTCTTCCAGACAAGAAGTTTaGTCTGCAGTAATTATAACTTGCACGCACGCCTTCTTTTGTACT +
Preference number: 2 (lower is better)
Translates to: FEAGHFLQNSSRQEV*SAVIITCTHAFFCT
Trigger: AGTACAAAAGAAGGCGTGCGTGCAAGTTATAATTACTGCAGACAAAACTTCTTGTCTGGAAGAGTTCTGCAGGAAATGGCCAGCCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR CCA 90 bp AATGCTTGGGTTTTTAATTTTATCCTGGAGAAGCTGATCAAGTTCGCAACGAAGCTTTCTAACCGAATCTaGTATCCCACGGTCAGACCC +
Preference number: 2 (lower is better)
Translates to: NAWVFNFILEKLIKFATKLSNRI*YPTVRP
Trigger: GGGTCTGACCGTGGGATACCAGATTCGGTTAGAAAG...CTTCGTTGCGAACTTGATCAGCTTCTCCAGGATAAAATTAAAAACCCAAGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR CCA 90 bp GCAGGATCCAAACAGCGGAAGATAGACCCAAACAACATTAGTTTGCCAATTCTCACACAGCTGTTCCAATaGCACTCTTTGTATTTCTGG +
Preference number: 2 (lower is better)
Translates to: AGSKQRKIDPNNISLPILTQLFQ*HSLYFW
Trigger: CCAGAAATACAAAGAGTGCCATTGGAACAGCTGTGT...GAGAATTGGCAAACTAATGTTGTTTGGGTCTATCTTCCGCTGTTTGGATCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR TCA 90 bp GAGTGCTTTCCATCCACAATCCACTCTAATAAGGCCTCTATTAATTCAAGATTCTGGTGGCTGAGGACTTaGCACTTTCTAACCGAATCT +
Preference number: 2 (lower is better)
Translates to: ECFPSTIHSNKASINSRFWWLRT*HFLTES
Trigger: AGATTCGGTTAGAAAGTGTCAAGTCCTCAGCCACCA...GAATCTTGAATTAATAGAGGCCTTATTAGAGTGGATTGTGGATGGAAAGCACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR TCA 90 bp CTTGAAGACCTGGCCTCTGCGATACAATGTCCTTCAAAACTAGCAGCAAGAAGTGAACTTCATCAACAATaGTATGGGAAACTCCTTGTA +
Preference number: 2 (lower is better)
Translates to: LEDLASAIQCPSKLAARSELHQQ*YGKLLV
Trigger: TACAAGGAGTTTCCCATATCATTGTTGATGAAGTTC...ACTTCTTGCTGCTAGTTTTGAAGGACATTGTATCGCAGAGGCCAGGTCTTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR CCA 90 bp GAGTGCTTTCCATCCACAATCCACTCTAATAAGGCCTCTATTAATTCAAGATTCGGCTACCTTCTCAGGTaGTCCATTCAGAGAATCATC +
Preference number: 2 (lower is better)
Translates to: ECFPSTIHSNKASINSRFGYLLR*SIQRII
Trigger: GATGATTCTCTGAATGGACCACCTGAGAAGGTAGCC...GAATCTTGAATTAATAGAGGCCTTATTAGAGTGGATTGTGGATGGAAAGCACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR CCA 90 bp CTTGAAGACCTGGCCTCTGCGATACAATGTCCTTCAAAACTAGCAGCAAGAAGTTCATCAACAATGATATaGGAAACTCCTTGTAGAGCT +
Preference number: 2 (lower is better)
Translates to: LEDLASAIQCPSKLAARSSSTMI*ETPCRA
Trigger: AGCTCTACAAGGAGTTTCCCATATCATTGTTGATGA...ACTTCTTGCTGCTAGTTTTGAAGGACATTGTATCGCAGAGGCCAGGTCTTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR CCA 90 bp AATGCTTGGGTTTTTAATTTTATCCTGGAGAAGCTGATCAAGTTCGCAACGAAGTACAAGTATAGCACCTaGAGGGTAGGAGTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: NAWVFNFILEKLIKFATKYKYST*RVGVLS
Trigger: GGAAAGCACTCCTACCCTCCAGGTGCTATACTTGTA...CTTCGTTGCGAACTTGATCAGCTTCTCCAGGATAAAATTAAAAACCCAAGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR TCA 90 bp GCAGGATCCAAACAGCGGAAGATAGACCCAAACAACATTAGTTTGCCAATTCTCTTAAAATCTAACTGTTaGTCTGGCACTGCATCTTTG +
Preference number: 2 (lower is better)
Translates to: AGSKQRKIDPNNISLPILLKSNC*SGTASL
Trigger: CAAAGATGCAGTGCCAGATCAACAGTTAGATTTTAA...GAGAATTGGCAAACTAATGTTGTTTGGGTCTATCTTCCGCTGTTTGGATCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR CCA 90 bp TTTAATTTTATCCTGGAGAAGCTGATCAAGTTCGCAACGAAGCTCCTTTACCAGTTGCTGATATCAGCTTaGGGTTCTCAGCATTTGAGT +
Preference number: 2 (lower is better)
Translates to: FNFILEKLIKFATKLLYQLLISA*GSQHLS
Trigger: ACTCAAATGCTGAGAACCCCAAGCTGATATCAGCAA...CTGGTAAAGGAGCTTCGTTGCGAACTTGATCAGCTTCTCCAGGATAAAATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR CCA 90 bp CTCAGCAATGTTGGTGGAAATTATAATCTTAGTTACTCCTGCAGGAGGTTTTACTTGAAATCTGTTTCATaGACCGCATATATGGGCTCC +
Preference number: 2 (lower is better)
Translates to: LSNVGGNYNLSYSCRRFYLKSVS*TAYMGS
Trigger: GGAGCCCATATATGCGGTCCATGAAACAGATTTCAA...GTAAAACCTCCTGCAGGAGTAACTAAGATTATAATTTCCACCAACATTGCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR CCA 90 bp ACAAGAAGTTTTGTCTGCAGTAATTATAACTTGCACGCACGCCTTCTTTTGTACCCTGCTGCTCTTCACTaGATAAAGATGAATGAAGTG +
Preference number: 2 (lower is better)
Translates to: TRSFVCSNYNLHARLLLYPAALH*IKMNEV
Trigger: CACTTCATTCATCTTTATCCAGTGAAGAGCAGCAGG...GTACAAAAGAAGGCGTGCGTGCAAGTTATAATTACTGCAGACAAAACTTCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR TCA 90 bp TTTCCATCCACAATCCACTCTAATAAGGCCTCTATTAATTCAAGATTCACCTTTCTCATTAAAATAACTTaGAGACCTGGCCTCTGCGAT +
Preference number: 2 (lower is better)
Translates to: FPSTIHSNKASINSRFTFLIKIT*RPGLCD
Trigger: ATCGCAGAGGCCAGGTCTTCAAGTTATTTTAATGAG...AAAGGTGAATCTTGAATTAATAGAGGCCTTATTAGAGTGGATTGTGGATGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR TCA 90 bp AATGCTTGGGTTTTTAATTTTATCCTGGAGAAGCTGATCAAGTTCGCAACGAAGCATTGTTTTGATGACTaGCTTGCTAACCCCTTTATA +
Preference number: 2 (lower is better)
Translates to: NAWVFNFILEKLIKFATKHCFDD*LANPFI
Trigger: TATAAAGGGGTTAGCAAGTCAGTCATCAAAACAATG...CTTCGTTGCGAACTTGATCAGCTTCTCCAGGATAAAATTAAAAACCCAAGCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR CCA 72 bp ATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTaGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTT +
Preference number: 3 (lower is better)
Translates to: IYTASAALGFMP*APPPGPAPIGL
Trigger: AAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
3UTR CCA 72 bp CTGGTGGCTGAGGACTTGACACTTTCTAACCGAATCTaGTATCCCACGGTCAGACCCACCCTCTCTGCTCTT +
Preference number: 3 (lower is better)
Translates to: LVAEDLTLSNRI*YPTVRPTLSAL
Trigger: AAGAGCAGAGAGGGTGGGTCTGACCGTGGGATACCAGATTCGGTTAGAAAGTGTCAAGTCCTCAGCCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR CAA 90 bp CAGACCCCAGATGCAACACGGCCTGCTCGGCCTTTCCTTTGTAGAGCATTAGCTGTTCAGCAACAGAGATaGCAGAGATTCGTCGGGGTT +
Preference number: 3 (lower is better)
Translates to: QTPDATRPARPFLCRALAVQQQR*QRFVGV
Trigger: AACCCCGACGAATCTCTGCAATCTCTGTTGCTGAAC...AGCTAATGCTCTACAAAGGAAAGGCCGAGCAGGCCGTGTTGCATCTGGGGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR GCA 72 bp CCGAATCTGGTATCCCACGGTCAGACCCACCCTCTCTaGTCTTTCTTTAGCAACGCGTTCAGCAACAGAGAT +
Preference number: 3 (lower is better)
Translates to: PNLVSHGQTHPL*SFFSNAFSNRD
Trigger: ATCTCTGTTGCTGAACGCGTTGCTAAAGAAAGAGCAGAGAGGGTGGGTCTGACCGTGGGATACCAGATTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR CAA 90 bp CACCTGATGGGAAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACAGAGATTCGTCGGGGTaGGGTACAGATGATGTTGGC +
Preference number: 3 (lower is better)
Translates to: HLMGSSYKTDPTIIQGDNRDSSG*GTDDVG
Trigger: GCCAACATCATCTGTACCCAACCCCGACGAATCTCT...GTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTTCCCATCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR CAA 90 bp ATCAAGTTCGCAACGAAGCTCCTTTACCAGTTCAGCCACCTGATGGGAAGCAGCCACGCACGCCTTCTTTaGTACTTAGCTGCCATCCCT +
Preference number: 3 (lower is better)
Translates to: IKFATKLLYQFSHLMGSSHARLL*YLAAIP
Trigger: AGGGATGGCAGCTAAGTACAAAAGAAGGCGTGCGTG...GCTGCTTCCCATCAGGTGGCTGAACTGGTAAAGGAGCTTCGTTGCGAACTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR CCA 72 bp CGTTCAGCAACAGAGATTGCAGAGATTCGTCGGGGTTaGGTACAGATGATGTTGGCTACCTTCTCAGGTGGT +
Preference number: 3 (lower is better)
Translates to: RSATEIAEIRRG*VQMMLATFSGG
Trigger: ACCACCTGAGAAGGTAGCCAACATCATCTGTACCCAACCCCGACGAATCTCTGCAATCTCTGTTGCTGAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR TCA 72 bp TTGCCAATTCTCACATCCACGGGCAGAGAGGCCAAATaGTACCCAAGAGGGGTCAATCTTTCATCTGGAGTT +
Preference number: 3 (lower is better)
Translates to: LPILTSTGREAK*YPRGVNLSSGV
Trigger: AACTCCAGATGAAAGATTGACCCCTCTTGGGTATCATTTGGCCTCTCTGCCCGTGGATGTGAGAATTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR CCA 72 bp GGGTTGGGTACAGATGATGTTGGCTACCTTCTCAGGTaGTCCATTCAGAGAATCATCCAGAATAAACTGCGG +
Preference number: 3 (lower is better)
Translates to: GLGTDDVGYLLR*SIQRIIQNKLR
Trigger: CCGCAGTTTATTCTGGATGATTCTCTGAATGGACCACCTGAGAAGGTAGCCAACATCATCTGTACCCAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR CAA 90 bp CACCTGATGGGAAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACTGCAGTAATTATAACTaGCACGCACGCCTTCTTTTG +
Preference number: 3 (lower is better)
Translates to: HLMGSSYKTDPTIIQGDNCSNYN*HARLLL
Trigger: CAAAAGAAGGCGTGCGTGCAAGTTATAATTACTGCA...GTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTTCCCATCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR CAA 90 bp GCAGGATCCAAACAGCGGAAGATAGACCCAAACAACATTAGTTTGCCAATTCTCCTGGTGGCTGAGGACTaGACACTTTCTAACCGAATC +
Preference number: 3 (lower is better)
Translates to: AGSKQRKIDPNNISLPILLVAED*TLSNRI
Trigger: GATTCGGTTAGAAAGTGTCAAGTCCTCAGCCACCAG...GAGAATTGGCAAACTAATGTTGTTTGGGTCTATCTTCCGCTGTTTGGATCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR CAA 90 bp ATCAAGTTCGCAACGAAGCTCCTTTACCAGTTCAGCCACCTGATGGGAAGCAGCATGATGGACATTGTTTaGATGACTGACTTGCTAACC +
Preference number: 3 (lower is better)
Translates to: IKFATKLLYQFSHLMGSSMMDIV*MTDLLT
Trigger: GGTTAGCAAGTCAGTCATCAAAACAATGTCCATCAT...GCTGCTTCCCATCAGGTGGCTGAACTGGTAAAGGAGCTTCGTTGCGAACTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR GCA 72 bp GCTGTTTGTTTTGACTGGAATTCCAACTCCAAGTGCTaGGGCACTGTCTACTACCTAGCTTTTCCTACTTGC +
Preference number: 3 (lower is better)
Translates to: AVCFDWNSNSKC*GTVYYLAFPTC
Trigger: GCAAGTAGGAAAAGCTAGGTAGTAGACAGTGCCGCAGCACTTGGAGTTGGAATTCCAGTCAAAACAAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442331.1
3UTR-3UTR CAA 90 bp AATGCTGTTTGTTTTGACTGGAATTCCAACTCCAAGTGCTGCGGCACTGTCTACTTCCTACTTGCATTTTaGCTCCTGTCCTCTCAGTTC +
Preference number: 3 (lower is better)
Translates to: NAVCFDWNSNSKCCGTVYFLLAF*LLSSQF
Trigger: GAACTGAGAGGACAGGAGCAAAAATGCAAGTAGGAA...GTAGACAGTGCCGCAGCACTTGGAGTTGGAATTCCAGTCAAAACAAACAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442331.1
3UTR-3UTR CAA 90 bp ATCAAGTTCGCAACGAAGCTCCTTTACCAGTTCAGCCACCTGATGGGAAGCAGCCGATTACTACGTCTGTaGTTGAAAAGAGAATTAGAC +
Preference number: 3 (lower is better)
Translates to: IKFATKLLYQFSHLMGSSRLLRL*LKRELD
Trigger: GTCTAATTCTCTTTTCAACAACAGACGTAGTAATCG...GCTGCTTCCCATCAGGTGGCTGAACTGGTAAAGGAGCTTCGTTGCGAACTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR GCA 72 bp AATGCTGTTTGTTTTGACTGGAATTCCAACTCCAAGTaGTGCGGCACTGTCTACTACCTAGCTTTTCCTACT +
Preference number: 3 (lower is better)
Translates to: NAVCFDWNSNSK*CGTVYYLAFPT
Trigger: AGTAGGAAAAGCTAGGTAGTAGACAGTGCCGCAGCACTTGGAGTTGGAATTCCAGTCAAAACAAACAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442331.1
3UTR-3UTR CAA 90 bp CTCAGCAATGTTGGTGGAAATTATAATCTTAGTTACTCCTGCAGGAGGTTTTACTGGGTACAGATGATGTaGGCTACCTTCTCAGGTGGT +
Preference number: 3 (lower is better)
Translates to: LSNVGGNYNLSYSCRRFYWVQMM*ATFSGG
Trigger: ACCACCTGAGAAGGTAGCCAACATCATCTGTACCCA...GTAAAACCTCCTGCAGGAGTAACTAAGATTATAATTTCCACCAACATTGCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR CAA 90 bp GCAGTCTCGGATGAATACTCGACTAGTTTTTATCTTCTCGTGGTACAACAGGTACTCGTAATCGTATTTTaGAGGCACGAAGAGAATCGG +
Preference number: 3 (lower is better)
Translates to: AVSDEYSTSFYLLVVQQVLVIVF*RHEENR
Trigger: CCGATTCTCTTCGTGCCTCAAAAATACGATTACGAG...TACCTGTTGTACCACGAGAAGATAAAAACTAGTCGAGTATTCATCCGAGACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR CAA 90 bp AATGCTTGGGTTTTTAATTTTATCCTGGAGAAGCTGATCAAGTTCGCAACGAAGAAGCAGCACACAGCATaGCTGATATCAGCTTGGGGT +
Preference number: 3 (lower is better)
Translates to: NAWVFNFILEKLIKFATKKQHTA*LISAWG
Trigger: ACCCCAAGCTGATATCAGCAATGCTGTGTGCTGCTT...CTTCGTTGCGAACTTGATCAGCTTCTCCAGGATAAAATTAAAAACCCAAGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR TCA 72 bp ATATCCATCGTTCTTGGTGACAAACTTCAACTCAGCTaGTTTTGGTTGCATTCTGACAGCTCCAGTACTGGT +
Preference number: 3 (lower is better)
Translates to: ISIVLGDKLQLS*FWLHSDSSSTG
Trigger: ACCAGTACTGGAGCTGTCAGAATGCAACCAAAATCAGCTGAGTTGAAGTTTGTCACCAAGAACGATGGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR TCA 72 bp AGCTCAGCGTTTAGAGTTGCACTCATTAAAATAACTTaGAGACCTGGCCTCTGCGATACAATGTCCTTCAAA +
Preference number: 3 (lower is better)
Translates to: SSAFRVALIKIT*RPGLCDTMSFK
Trigger: TTTGAAGGACATTGTATCGCAGAGGCCAGGTCTTCAAGTTATTTTAATGAGTGCAACTCTAAACGCTGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR-3UTR CAA 90 bp TTTAATTTTATCCTGGAGAAGCTGATCAAGTTCGCAACGAAGCTCCTTTACCAGCCAAACAACATTAGTTaGCCAATTCTCACATCCACG +
Preference number: 3 (lower is better)
Translates to: FNFILEKLIKFATKLLYQPNNIS*PILTST
Trigger: CGTGGATGTGAGAATTGGCAAACTAATGTTGTTTGG...CTGGTAAAGGAGCTTCGTTGCGAACTTGATCAGCTTCTCCAGGATAAAATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR TCA 72 bp CACTTTCTTCTGTCCTCTCATGAACTTCATCAACAATaGTATGGGAAACTCCTTGTAGAGCTGTATCTCCTT +
Preference number: 3 (lower is better)
Translates to: HFLLSSHELHQQ*YGKLLVELYLL
Trigger: AAGGAGATACAGCTCTACAAGGAGTTTCCCATATCATTGTTGATGAAGTTCATGAGAGGACAGAAGAAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR TCA 72 bp ATGAAGGGTGAATGTGTACATATCCATCGTTCTTGGTaGCAAACTTCAACTCAGCTGATTTTGGTTGCATTC +
Preference number: 3 (lower is better)
Translates to: MKGECVHIHRSW*QTSTQLILVAF
Trigger: GAATGCAACCAAAATCAGCTGAGTTGAAGTTTGTCACCAAGAACGATGGATATGTACACATTCACCCTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTCCGGCTGTCGGGAGGTaGTGCCCAAGGGTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGPAVGR*CPRVRG
Trigger: ACCTCTGACCCTTGGGCAGCACCTCCCGACAGCCGG...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR GCA 90 bp ATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCAGGGTGGAGGCCTTTCTGTTaGCGCCACCTCCACCACCAC +
Preference number: 4 (lower is better)
Translates to: IYTASAALGFMPWAPPPGWRPFC*RHLHHH
Trigger: GTGGTGGTGGAGGTGGCGGCAACAGAAAGGCCTCCA...CCCTGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR GCA 90 bp GGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCACACTTGGAGCAGCCCTaGGGTGGCCCAGCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: GSGQGFVRNGPKGIYTASHLEQP*GGPAAA
Trigger: CGCTGCAGCTGGGCCACCGCAGGGCTGCTCCAAGTG...TGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp CCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTTCCCAGGTGAGCGGAGCAGCCCTGCGGTaGCCCAGCTGCAGCGGCACA +
Preference number: 4 (lower is better)
Translates to: PNRSLVRGRGSAVISQVSGAALR*PSCSGT
Trigger: TGTGCCGCTGCAGCTGGGCCACCGCAGGGCTGCTCC...GCTCACCTGGGAAATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp TCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTCTCACGATTCTCACTTaGAGCAGCCCTGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SSTRASPNRSLVRGRGSALTILT*SSPAVA
Trigger: GGCCACCGCAGGGCTGCTCCAAGTGAGAATCGTGAG...AGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR TCA 90 bp GGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCAGGCAGAGAGGCCAAATaGTACCCAAGAGGGGTCAAT +
Preference number: 4 (lower is better)
Translates to: GIYTASAALGFMPWAPPPGREAK*YPRGVN
Trigger: ATTGACCCCTCTTGGGTATCATTTGGCCTCTCTGCC...TGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTGGCAGAGAGGCCAAATaGTACCCAAGAGGGGTCAAT +
Preference number: 4 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGGREAK*YPRGVN
Trigger: ATTGACCCCTCTTGGGTATCATTTGGCCTCTCTGCC...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp ATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCAGGGCAAGCAGGGAGTGATTaGCTCTCTTGCAGAATGGAC +
Preference number: 4 (lower is better)
Translates to: IYTASAALGFMPWAPPPGQAGSD*LSCRMD
Trigger: GTCCATTCTGCAAGAGAGGCAATCACTCCCTGCTTG...CCCTGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp CCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTTCCCAGGTGAGCCCTGGCTCGCAGAGTTaGGTCCCGAGCCGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: PNRSLVRGRGSAVISQVSPGSQS*VPSRLS
Trigger: CGACAGCCGGCTCGGGACCCAACTCTGCGAGCCAGG...GCTCACCTGGGAAATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTGAACTCATTTTCACCTaGCTCGCAGAGTTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGELIFT*LAELGP
Trigger: GGGACCCAACTCTGCGAGCCAGGTGAAAATGAGTTC...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp ATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCAGGGCACTCCAAATTGTGCTaGGAGTGGCCAAGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: IYTASAALGFMPWAPPPGHSKLC*EWPRLC
Trigger: ACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTG...CCCTGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp GGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCATTCCCAAGCAGGGAGTaGTTGCCTCTCTTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: GIYTASAALGFMPWAPPPFPSRE*LPLLQN
Trigger: ATTCTGCAAGAGAGGCAATCACTCCCTGCTTGGGAA...TGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR TCA 90 bp ATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCAGGGCAGTCATACCACTTATaGCAACCACCTGGTGCTTAC +
Preference number: 4 (lower is better)
Translates to: IYTASAALGFMPWAPPPGQSYHL*QPPGAY
Trigger: GTAAGCACCAGGTGGTTGTCATAAGTGGTATGACTG...CCCTGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR TCA 90 bp GCCTTCTCAGCAGCACTCCCGTGGTGCAGTATAACAGTCTGGTGGCTGAGGACTGGCAGAGAGGCCAAATaGTACCCAAGAGGGGTCAAT +
Preference number: 4 (lower is better)
Translates to: AFSAALPWCSITVWWLRTGREAK*YPRGVN
Trigger: ATTGACCCCTCTTGGGTATCATTTGGCCTCTCTGCC...AGTCCTCAGCCACCAGACTGTTATACTGCACCACGGGAGTGCTGCTGAGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp GGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCAAGCACACAGCATTGCTaGTATCAGCTTGGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: GIYTASAALGFMPWAPPPSTQHC*YQLGVL
Trigger: GAGAACCCCAAGCTGATATCAGCAATGCTGTGTGCT...TGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTAGCACACAGCATTGCTaGTATCAGCTTGGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGSTQHC*YQLGVL
Trigger: GAGAACCCCAAGCTGATATCAGCAATGCTGTGTGCT...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp GGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGTCGGGAGGTGCTaGCCAAGGGTCAGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GSGQGFVRNGPKGIYTASAVGRC*PRVRGP
Trigger: TGGACCTCTGACCCTTGGGCAGCACCTCCCGACAGC...TGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR GCA 90 bp AAGGGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACAGACCCACCCTCTCTaGTCTTTCTTTAGCAACGCG +
Preference number: 4 (lower is better)
Translates to: KGIYTASAALGFMPWAPPQTHPL*SFFSNA
Trigger: CGCGTTGCTAAAGAAAGAGCAGAGAGGGTGGGTCTG...TGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR GCA 90 bp ACTTGGCCTCCTCCAAACAAGACCAGCGGGTACACAGACACCATGCTGCAGTCTGCAGCACTCCCGTGGTaGAGTATAACAGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TWPPPNKTSGYTDTMLQSAALPW*SITVWW
Trigger: CCACCAGACTGTTATACTGCACCACGGGAGTGCTGC...AGACTGCAGCATGGTGTCTGTGTACCCGCTGGTCTTGTTTGGAGGAGGCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp GTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGGAAGCAGACCCCAGATaGAACACGGCCTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: VAKALLEMALRVYTLPQLEADPR*NTACSA
Trigger: GGCCGAGCAGGCCGTGTTGCATCTGGGGTCTGCTTC...CAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp GGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCATTGGGCTTCATGCCCTaGGCTCCTCCACCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GSGQGFVRNGPKGIYTASLGFMP*APPPGP
Trigger: TGGCCCTGGTGGAGGAGCCCAGGGCATGAAGCCCAA...TGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp ACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTTTGGGCTTCATGCCCTaGGCTCCTCCACCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: TRASPNRSLVRGRGSAVILGFMP*APPPGP
Trigger: TGGCCCTGGTGGAGGAGCCCAGGGCATGAAGCCCAA...AATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp AAGGGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCAACCAGTTCAGCCACCTaGTGGGAAGCAGCTACAAAA +
Preference number: 4 (lower is better)
Translates to: KGIYTASAALGFMPWAPPTSSAT*WEAATK
Trigger: TTTTGTAGCTGCTTCCCATCAGGTGGCTGAACTGGT...TGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTTATCCTGGAGAAGCTaGTCAAGTTCGCAACGAAGC +
Preference number: 4 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGLSWRS*SSSQRS
Trigger: GCTTCGTTGCGAACTTGATCAGCTTCTCCAGGATAA...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp GGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCATCAGCATCTTGTTCTTaGAGGTCTCGGAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: GIYTASAALGFMPWAPPPSASCS*RSRRRA
Trigger: AGCTCTTCTCCGAGACCTGCAAGAACAAGATGCTGA...TGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp TCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTTCCCATGAGATTTACTaGCGTGACTCCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SSTRASPNRSLVRGRGSASHEIY*RDSCLL
Trigger: GAGGAGGCAGGAGTCACGCCAGTAAATCTCATGGGA...AGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp CAGACCCCAGATGCAACACGGCCTGCTCGGCCTTTCCTTTGTAGAGCATTAGCTGGTCCTAGAGGGTACTaGCAGAAAGTTCACAGGAGG +
Preference number: 4 (lower is better)
Translates to: QTPDATRPARPFLCRALAGPRGY*QKVHRR
Trigger: CCTCCTGTGAACTTTCTGCCAGTACCCTCTAGGACC...AGCTAATGCTCTACAAAGGAAAGGCCGAGCAGGCCGTGTTGCATCTGGGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTGGACTGGAACTGTCTaGAAGCCTGTTTCATTCGGA +
Preference number: 4 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGWTGTV*KPVSFG
Trigger: TCCGAATGAAACAGGCTTCCAGACAGTTCCAGTCCA...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp GGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCATCTTGCAGAATGGACTaGAACTGTCTGGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: GIYTASAALGFMPWAPPPSCRMD*NCLEAC
Trigger: ACAGGCTTCCAGACAGTTCCAGTCCATTCTGCAAGA...TGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp AAGGGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACAAAGACAGGCAAGCTaGGTTTTAGGCTCTCACCCT +
Preference number: 4 (lower is better)
Translates to: KGIYTASAALGFMPWAPPQRQAS*VLGSHP
Trigger: AGGGTGAGAGCCTAAAACCCAGCTTGCCTGTCTTTG...TGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTGGCGCCTTGATTCACTaGAGATACAAAAGTCATCTC +
Preference number: 4 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGGALIH*RYKSHL
Trigger: GAGATGACTTTTGTATCTTCAGTGAATCAAGGCGCC...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR TCA 90 bp GGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCATCTGGAAGGGCGCCTTaGTTCACTGAAGATACAAAA +
Preference number: 4 (lower is better)
Translates to: GIYTASAALGFMPWAPPPSGRAP*FTEDTK
Trigger: TTTTGTATCTTCAGTGAATCAAGGCGCCCTTCCAGA...TGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR TCA 90 bp TCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTCTCCACAGATGGACTTaGGAGCAAATGCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSTRASPNRSLVRGRGSALHRWT*EQMPLP
Trigger: AGGAAGAGGCATTTGCTCTCAAGTCCATCTGTGGAG...AGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR TCA 90 bp ACTTGGCCTCCTCCAAACAAGACCAGCGGGTACACAGACACCATGCTGCAGTCTCTCCACAGATGGACTTaGGAGCAAATGCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TWPPPNKTSGYTDTMLQSLHRWT*EQMPLP
Trigger: AGGAAGAGGCATTTGCTCTCAAGTCCATCTGTGGAG...AGACTGCAGCATGGTGTCTGTGTACCCGCTGGTCTTGTTTGGAGGAGGCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTATTTTGGTTGCATTCTaGCAGCTCCAGTACTGGTCT +
Preference number: 4 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGILVAF*QLQYWS
Trigger: AGACCAGTACTGGAGCTGTCAGAATGCAACCAAAAT...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR GCA 90 bp TCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTCACTGGGTAAGGAGATaGTCTAGTGATGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: SSTRASPNRSLVRGRGSAHWVRR*SSDAPT
Trigger: TGTGGGAGCATCACTAGAGCATCTCCTTACCCAGTG...AGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR GCA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTATTGGTGGAATAAAATaGCACGAGCGGAGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGIGGIK*HERSLV
Trigger: TACCAAGCTCCGCTCGTGGCATTTTATTCCACCAAT...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR GCA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTAGTGATTGCCTCTCTTaGAGAATGGACTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGSDCLS*RMDWNC
Trigger: ACAGTTCCAGTCCATTCTGCAAGAGAGGCAATCACT...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR GCA 90 bp AAGGGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCATTCAGCAACAGAGATTaGAGAGATTCGTCGGGGTTG +
Preference number: 4 (lower is better)
Translates to: KGIYTASAALGFMPWAPPFSNRD*RDSSGL
Trigger: CAACCCCGACGAATCTCTGCAATCTCTGTTGCTGAA...TGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR GCA 90 bp CCCTTGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCGCAGCACTCCCGTGGTaGAGTATAACAGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PLTLQIVLGVAKALLEMAAALPW*SITVWW
Trigger: CCACCAGACTGTTATACTGCACCACGGGAGTGCTGC...GGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR GCA 90 bp CTTGAAGACCTGGCCTCTGCGATACAATGTCCTTCAAAACTAGCAGCAAGAAGTGAAGCAGACCCCAGATaGAACACGGCCTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LEDLASAIQCPSKLAARSEADPR*NTACSA
Trigger: GGCCGAGCAGGCCGTGTTGCATCTGGGGTCTGCTTC...ACTTCTTGCTGCTAGTTTTGAAGGACATTGTATCGCAGAGGCCAGGTCTTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp ACTTGGCCTCCTCCAAACAAGACCAGCGGGTACACAGACACCATGCTGCAGTCTAGGCTGGCCATTTCCTaGAGAACTCTTCCAGACAAG +
Preference number: 4 (lower is better)
Translates to: TWPPPNKTSGYTDTMLQSRLAIS*RTLPDK
Trigger: CTTGTCTGGAAGAGTTCTGCAGGAAATGGCCAGCCT...AGACTGCAGCATGGTGTCTGTGTACCCGCTGGTCTTGTTTGGAGGAGGCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp CAGACCCCAGATGCAACACGGCCTGCTCGGCCTTTCCTTTGTAGAGCATTAGCTCTTTCTAACCGAATCTaGTATCCCACGGTCAGACCC +
Preference number: 4 (lower is better)
Translates to: QTPDATRPARPFLCRALALSNRI*YPTVRP
Trigger: GGGTCTGACCGTGGGATACCAGATTCGGTTAGAAAG...AGCTAATGCTCTACAAAGGAAAGGCCGAGCAGGCCGTGTTGCATCTGGGGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp ATCTGGTATCCCACGGTCAGACCCACCCTCTCTGCTCTTTCTTTAGCAACGCGTTCAGCAGCACTCCCGTaGTGCAGTATAACAGTCTGG +
Preference number: 4 (lower is better)
Translates to: IWYPTVRPTLSALSLATRSAALP*CSITVW
Trigger: CCAGACTGTTATACTGCACCACGGGAGTGCTGCTGA...ACGCGTTGCTAAAGAAAGAGCAGAGAGGGTGGGTCTGACCGTGGGATACCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp ATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCAGGGTTGAAATCTGTTTCATaGACCGCATATATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: IYTASAALGFMPWAPPPGLKSVS*TAYMGS
Trigger: GGAGCCCATATATGCGGTCCATGAAACAGATTTCAA...CCCTGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp AAGGGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCATACAAGTATAGCACCTaGAGGGTAGGAGTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: KGIYTASAALGFMPWAPPYKYST*RVGVLS
Trigger: GGAAAGCACTCCTACCCTCCAGGTGCTATACTTGTA...TGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp ATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCAGGGACACAGCTGTTCCAATaGCACTCTTTGTATTTCTGG +
Preference number: 4 (lower is better)
Translates to: IYTASAALGFMPWAPPPGTQLFQ*HSLYFW
Trigger: CCAGAAATACAAAGAGTGCCATTGGAACAGCTGTGT...CCCTGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTCACCTGCACTACATTTaGATACAAAGCAGCACACAG +
Preference number: 4 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGHLHYI*IQSSTQ
Trigger: CTGTGTGCTGCTTTGTATCCAAATGTAGTGCAGGTG...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
3UTR CAA 72 bp GCGTTCAGCAACAGAGATTGCAGAGATTCGTCGGGGTaGGGTACAGATGATGTTGGCTACCTTCTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: AFSNRDCRDSSG*GTDDVGYLLRW
Trigger: CCACCTGAGAAGGTAGCCAACATCATCTGTACCCAACCCCGACGAATCTCTGCAATCTCTGTTGCTGAACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp GGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCATTTCCATTTTGGGCGTaGCTCTCCTTTGCTTATGTT +
Preference number: 4 (lower is better)
Translates to: GIYTASAALGFMPWAPPPFPFWA*LSFAYV
Trigger: AACATAAGCAAAGGAGAGTCACGCCCAAAATGGAAA...TGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR TCA 90 bp CACCTGATGGGAAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACGGGGTTGGGTACAGATaGTGTTGGCTACCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: HLMGSSYKTDPTIIQGDNGVGYR*CWLPSQ
Trigger: CTGAGAAGGTAGCCAACATCATCTGTACCCAACCCC...GTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTTCCCATCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp TCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTTGGTGGCTGAGGACTTaGCACTTTCTAACCGAATCT +
Preference number: 4 (lower is better)
Translates to: SSTRASPNRSLVRGRGSAWWLRT*HFLTES
Trigger: AGATTCGGTTAGAAAGTGTCAAGTCCTCAGCCACCA...AGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR TCA 90 bp GGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCACTCATTAAAATAACTTaGAGACCTGGCCTCTGCGAT +
Preference number: 4 (lower is better)
Translates to: GIYTASAALGFMPWAPPPLIKIT*RPGLCD
Trigger: ATCGCAGAGGCCAGGTCTTCAAGTTATTTTAATGAG...TGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp GTCCTCTCAGTTCCTTACTCAGGCCTAGAGTGGTTCGTGCTCTCAGTGGAACTCTCCAACTCCAAGTGCTaGGGCACTGTCTACTACCTA +
Preference number: 4 (lower is better)
Translates to: VLSVPYSGLEWFVLSVELSNSKC*GTVYYL
Trigger: TAGGTAGTAGACAGTGCCGCAGCACTTGGAGTTGGA...GAGTTCCACTGAGAGCACGAACCACTCTAGGCCTGAGTAAGGAACTGAGAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442331.1
CDS-3UTR GCA 90 bp ATCTGGTATCCCACGGTCAGACCCACCCTCTCTGCTCTTTCTTTAGCAACGCGTGGACTTGAGAGCAAATaGCTCTTCCTGTCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: IWYPTVRPTLSALSLATRGLESK*LFLSLF
Trigger: GAACAGCGACAGGAAGAGGCATTTGCTCTCAAGTCC...ACGCGTTGCTAAAGAAAGAGCAGAGAGGGTGGGTCTGACCGTGGGATACCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp GTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGATACACTGCCTCAGCTaGCTTGGGCTTCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: VAKALLEMALRVYTLPQLIHCLS*LGLHAL
Trigger: CAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTAT...CAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp GGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAATACACTGCCTCAGCTaGCTTGGGCTTCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: GSGQGFVRNGPKGIYTASIHCLS*LGLHAL
Trigger: CAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTAT...TGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp TCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTTCCACCTCCTTTGCCTaGCTTGCCTTTTCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: SSTRASPNRSLVRGRGSASTSFA*LAFSSY
Trigger: GTAAGAAGAAAAGGCAAGCCAGGCAAAGGAGGTGGA...AGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp GGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAAGGTTCCTGTCCAGCTaGCCAGTACCGCTCATCGTT +
Preference number: 4 (lower is better)
Translates to: GSGQGFVRNGPKGIYTASRFLSS*PVPLIV
Trigger: AACGATGAGCGGTACTGGCCAGCTGGACAGGAACCT...TGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp GGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCAGAGGTAGGTTCTCATTaGTGGAATAAAATGCCACGA +
Preference number: 4 (lower is better)
Translates to: GIYTASAALGFMPWAPPPEVGSH*WNKMPR
Trigger: TCGTGGCATTTTATTCCACCAATGAGAACCTACCTC...TGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp GGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCAGGGTCACTATACTTGTaGTGGGTATTCGTTAGTAAC +
Preference number: 4 (lower is better)
Translates to: GIYTASAALGFMPWAPPPGSLYL*WVFVSN
Trigger: GTTACTAACGAATACCCACCACAAGTATAGTGACCC...TGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp CTAGTGAATAAATGGAAGCAGACCCCAGATGCAACACGGCCTGCTCGGCCTTTCGAGATTCGTCGGGGTTaGGTACAGATGATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: LVNKWKQTPDATRPARPFEIRRG*VQMMLA
Trigger: AGCCAACATCATCTGTACCCAACCCCGACGAATCTC...GAAAGGCCGAGCAGGCCGTGTTGCATCTGGGGTCTGCTTCCATTTATTCACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp GGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCACCTGCTGCTCTTCACTaGATAAAGATGAATGAAGTG +
Preference number: 4 (lower is better)
Translates to: GIYTASAALGFMPWAPPPPAALH*IKMNEV
Trigger: CACTTCATTCATCTTTATCCAGTGAAGAGCAGCAGG...TGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp AAGGGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCATGGCTAGTGAATAAATaGAAGCAGACCCCAGATGCA +
Preference number: 4 (lower is better)
Translates to: KGIYTASAALGFMPWAPPWLVNK*KQTPDA
Trigger: TGCATCTGGGGTCTGCTTCCATTTATTCACTAGCCA...TGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp CAGACCCCAGATGCAACACGGCCTGCTCGGCCTTTCCTTTGTAGAGCATTAGCTGTCATATGTAGAGTCTaGAGGGGTACTTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: QTPDATRPARPFLCRALAVICRV*RGTLAL
Trigger: CAAAGCCAAAGTACCCCTTCAGACTCTACATATGAC...AGCTAATGCTCTACAAAGGAAAGGCCGAGCAGGCCGTGTTGCATCTGGGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp AAGGGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCAGGGGCACTTCATGTTTaGATCTGCATTTTGATCCAA +
Preference number: 4 (lower is better)
Translates to: KGIYTASAALGFMPWAPPGALHV*ICILIQ
Trigger: TTGGATCAAAATGCAGATTCAAACATGAAGTGCCCC...TGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR TCA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTATTCTTCCAACAATTTaGTTTGGGGGCACTTCATGT +
Preference number: 4 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGILPTI*FGGTSC
Trigger: ACATGAAGTGCCCCCAAATCAAATTGTTGGAAGAAT...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR TCA 90 bp ATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCAGGGTATTCGTTAGTAACTTaGCTATTTCCGACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: IYTASAALGFMPWAPPPGYSLVT*LFPTLP
Trigger: AGGAAGAGTCGGAAATAGTCAAGTTACTAACGAATA...CCCTGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR TCA 90 bp CACCTGATGGGAAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACTTCCCAAGCAGGGAGTaGTTGCCTCTCTTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: HLMGSSYKTDPTIIQGDNFPSRE*LPLLQN
Trigger: ATTCTGCAAGAGAGGCAATCACTCCCTGCTTGGGAA...GTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTTCCCATCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp ATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCAGGGGAACTTCATCAACAATaGTATGGGAAACTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: IYTASAALGFMPWAPPPGELHQQ*YGKLLV
Trigger: TACAAGGAGTTTCCCATATCATTGTTGATGAAGTTC...CCCTGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR TCA 90 bp ATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCAGGGACAGACTGGAGATTATaGGCACTAAACATCTCTAAA +
Preference number: 4 (lower is better)
Translates to: IYTASAALGFMPWAPPPGTDWRL*ALNISK
Trigger: TTTAGAGATGTTTAGTGCTCATAATCTCCAGTCTGT...CCCTGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp CCCTTGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCTTAGGCTCTCACCCTTaGCACTCCAAATTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PLTLQIVLGVAKALLEMALGSHP*HSKLCW
Trigger: CCAGCACAATTTGGAGTGTCAAGGGTGAGAGCCTAA...GGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp TCCTGTCCTCTCAGTTCCTTACTCAGGCCTAGAGTGGTTCGTGCTCTCAGTGGAAATTCCAACTCCAAGTaGTGCGGCACTGTCTACTAC +
Preference number: 4 (lower is better)
Translates to: SCPLSSLLRPRVVRALSGNSNSK*CGTVYY
Trigger: GTAGTAGACAGTGCCGCAGCACTTGGAGTTGGAATT...TCCACTGAGAGCACGAACCACTCTAGGCCTGAGTAAGGAACTGAGAGGACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442331.1
CDS-3UTR GCA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTGGAAAGTTTTTGCACTaGAAATGGGGAGACTGTAAA +
Preference number: 4 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGGKFLH*KWGDCK
Trigger: TTTACAGTCTCCCCATTTGCAGTGCAAAAACTTTCC...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR GCA 90 bp CCCTTGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCGGACTTGAGAGCAAATaGCTCTTCCTGTCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: PLTLQIVLGVAKALLEMAGLESK*LFLSLF
Trigger: GAACAGCGACAGGAAGAGGCATTTGCTCTCAAGTCC...GGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR GCA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTCTTTTGGCTTGGATTTaGGGAATCTACTTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGLLAWI*GIYLSD
Trigger: ATCTGACAAGTAGATTCCGCAAATCCAAGCCAAAAG...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR GCA 90 bp ACTTGGCCTCCTCCAAACAAGACCAGCGGGTACACAGACACCATGCTGCAGTCTAGTGATTGCCTCTCTTaGAGAATGGACTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: TWPPPNKTSGYTDTMLQSSDCLS*RMDWNC
Trigger: ACAGTTCCAGTCCATTCTGCAAGAGAGGCAATCACT...AGACTGCAGCATGGTGTCTGTGTACCCGCTGGTCTTGTTTGGAGGAGGCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp AAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTTGGGTCAGAGGTCCAAACTaGACTTGGCCACCCTCACGA +
Preference number: 4 (lower is better)
Translates to: KALLEMALRVYTLPQLPWVRGPN*TWPPSR
Trigger: TCGTGAGGGTGGCCAAGTCCAGTTTGGACCTCTGAC...CCAAGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp GTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGGGTCCTAGAGGGTACTaGCAGAAAGTTCACAGGAGG +
Preference number: 4 (lower is better)
Translates to: VAKALLEMALRVYTLPQLGPRGY*QKVHRR
Trigger: CCTCCTGTGAACTTTCTGCCAGTACCCTCTAGGACC...CAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp ATCTGGTATCCCACGGTCAGACCCACCCTCTCTGCTCTTTCTTTAGCAACGCGTTGGACTGGAACTGTCTaGAAGCCTGTTTCATTCGGA +
Preference number: 4 (lower is better)
Translates to: IWYPTVRPTLSALSLATRWTGTV*KPVSFG
Trigger: TCCGAATGAAACAGGCTTCCAGACAGTTCCAGTCCA...ACGCGTTGCTAAAGAAAGAGCAGAGAGGGTGGGTCTGACCGTGGGATACCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTCTTATGACAACCACCTaGTGCTTACGCAATAAGTTA +
Preference number: 4 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGLMTTT*CLRNKL
Trigger: TAACTTATTGCGTAAGCACCAGGTGGTTGTCATAAG...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp CCCTTGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCGAGATTCGTCGGGGTTaGGTACAGATGATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: PLTLQIVLGVAKALLEMAEIRRG*VQMMLA
Trigger: AGCCAACATCATCTGTACCCAACCCCGACGAATCTC...GGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp AAGGGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCATTGCTGATATCAGCTTaGGGTTCTCAGCATTTGAGT +
Preference number: 4 (lower is better)
Translates to: KGIYTASAALGFMPWAPPLLISA*GSQHLS
Trigger: ACTCAAATGCTGAGAACCCCAAGCTGATATCAGCAA...TGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp CCCTTGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCCAAGCTTATCTGGTTaGCTGCCTCAGAGATCTTCA +
Preference number: 4 (lower is better)
Translates to: PLTLQIVLGVAKALLEMAPSLSG*LPQRSS
Trigger: TGAAGATCTCTGAGGCAGTCAACCAGATAAGCTTGG...GGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR TCA 90 bp ATCAAGTTCGCAACGAAGCTCCTTTACCAGTTCAGCCACCTGATGGGAAGCAGCCCAAGCTTATCTGGTTaGCTGCCTCAGAGATCTTCA +
Preference number: 4 (lower is better)
Translates to: IKFATKLLYQFSHLMGSSPSLSG*LPQRSS
Trigger: TGAAGATCTCTGAGGCAGTCAACCAGATAAGCTTGG...GCTGCTTCCCATCAGGTGGCTGAACTGGTAAAGGAGCTTCGTTGCGAACTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp AAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTTGGGGGGTTGGGTACAGATaGTGTTGGCTACCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: KALLEMALRVYTLPQLPWGVGYR*CWLPSQ
Trigger: CTGAGAAGGTAGCCAACATCATCTGTACCCAACCCC...CCAAGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR TCA 90 bp CACCTGATGGGAAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACTGGTGGCTGAGGACTTaGCACTTTCTAACCGAATCT +
Preference number: 4 (lower is better)
Translates to: HLMGSSYKTDPTIIQGDNWWLRT*HFLTES
Trigger: AGATTCGGTTAGAAAGTGTCAAGTCCTCAGCCACCA...GTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTTCCCATCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp ACTTGGCCTCCTCCAAACAAGACCAGCGGGTACACAGACACCATGCTGCAGTCTCTCATTAAAATAACTTaGAGACCTGGCCTCTGCGAT +
Preference number: 4 (lower is better)
Translates to: TWPPPNKTSGYTDTMLQSLIKIT*RPGLCD
Trigger: ATCGCAGAGGCCAGGTCTTCAAGTTATTTTAATGAG...AGACTGCAGCATGGTGTCTGTGTACCCGCTGGTCTTGTTTGGAGGAGGCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTGTTCATAAAGCATTTTaGTTTCTGCTAGTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGVHKAF*FLLVLV
Trigger: TACCAGGACTAGCAGAAATCAAAATGCTTTATGAAC...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp TCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTTTCACTGATGAAGGGTaGATGTGTACATATCCATCG +
Preference number: 4 (lower is better)
Translates to: SSTRASPNRSLVRGRGSAFTDEG*MCTYPS
Trigger: CGATGGATATGTACACATTCACCCTTCATCAGTGAA...AGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR TCA 90 bp GTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGACCAGTTCAGCCACCTaGTGGGAAGCAGCTACAAAA +
Preference number: 4 (lower is better)
Translates to: VAKALLEMALRVYTLPQLTSSAT*WEAATK
Trigger: TTTTGTAGCTGCTTCCCATCAGGTGGCTGAACTGGT...CAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp ATCAAGTTCGCAACGAAGCTCCTTTACCAGTTCAGCCACCTGATGGGAAGCAGCTTATCCTGGAGAAGCTaGTCAAGTTCGCAACGAAGC +
Preference number: 4 (lower is better)
Translates to: IKFATKLLYQFSHLMGSSLSWRS*SSSQRS
Trigger: GCTTCGTTGCGAACTTGATCAGCTTCTCCAGGATAA...GCTGCTTCCCATCAGGTGGCTGAACTGGTAAAGGAGCTTCGTTGCGAACTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp GGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCACTTTTTATTGTGTGGTaGCAAGTTTCACAATTGTGC +
Preference number: 4 (lower is better)
Translates to: GIYTASAALGFMPWAPPPLFIVW*QVSQLC
Trigger: GCACAATTGTGAAACTTGTCACCACACAATAAAAAG...TGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTCTTTTTATTGTGTGGTaGCAAGTTTCACAATTGTGC +
Preference number: 4 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGLFIVW*QVSQLC
Trigger: GCACAATTGTGAAACTTGTCACCACACAATAAAAAG...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp ACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTTTAGGCTCTCACCCTTaGCACTCCAAATTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TRASPNRSLVRGRGSAVILGSHP*HSKLCW
Trigger: CCAGCACAATTTGGAGTGTCAAGGGTGAGAGCCTAA...AATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp ATCAAGTTCGCAACGAAGCTCCTTTACCAGTTCAGCCACCTGATGGGAAGCAGCTCAGCATCTTGTTCTTaGAGGTCTCGGAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: IKFATKLLYQFSHLMGSSSASCS*RSRRRA
Trigger: AGCTCTTCTCCGAGACCTGCAAGAACAAGATGCTGA...GCTGCTTCCCATCAGGTGGCTGAACTGGTAAAGGAGCTTCGTTGCGAACTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp GCCTTCTCAGCAGCACTCCCGTGGTGCAGTATAACAGTCTGGTGGCTGAGGACTGGAAAGTTTTTGCACTaGAAATGGGGAGACTGTAAA +
Preference number: 4 (lower is better)
Translates to: AFSAALPWCSITVWWLRTGKFLH*KWGDCK
Trigger: TTTACAGTCTCCCCATTTGCAGTGCAAAAACTTTCC...AGTCCTCAGCCACCAGACTGTTATACTGCACCACGGGAGTGCTGCTGAGAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp ATCAAGTTCGCAACGAAGCTCCTTTACCAGTTCAGCCACCTGATGGGAAGCAGCCTCTACTATAACAGGTaGAGGACCGTCATCCTCATC +
Preference number: 4 (lower is better)
Translates to: IKFATKLLYQFSHLMGSSLYYNR*RTVILI
Trigger: GATGAGGATGACGGTCCTGCACCTGTTATAGTAGAG...GCTGCTTCCCATCAGGTGGCTGAACTGGTAAAGGAGCTTCGTTGCGAACTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTATCACTGTTTGCGAATaGAAATTCCAGCTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGITVCE*KFQLFL
Trigger: CAGAAAAAGCTGGAATTTGCATTCGCAAACAGTGAT...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp ATCAAGTTCGCAACGAAGCTCCTTTACCAGTTCAGCCACCTGATGGGAAGCAGCTTTCTCAATTTCCCTTaGTCTGAGCCCTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: IKFATKLLYQFSHLMGSSFLNFP*SEPFPC
Trigger: GCAAGGGAAGGGCTCAGAGCAAGGGAAATTGAGAAA...GCTGCTTCCCATCAGGTGGCTGAACTGGTAAAGGAGCTTCGTTGCGAACTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp TCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTTCAGCTGATTTTGGTTaGATTCTGACAGCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: SSTRASPNRSLVRGRGSASADFG*ILTAPV
Trigger: TACTGGAGCTGTCAGAATGCAACCAAAATCAGCTGA...AGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp GGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGGGGTACTTTGGCTTTaGGTTTCCATTTTGGGCGTG +
Preference number: 4 (lower is better)
Translates to: GSGQGFVRNGPKGIYTASGVLWL*VSILGV
Trigger: CACGCCCAAAATGGAAACCCAAAGCCAAAGTACCCC...TGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp CTAGTGAATAAATGGAAGCAGACCCCAGATGCAACACGGCCTGCTCGGCCTTTCTCATCCAAGCTTATCTaGTTGACTGCCTCAGAGATC +
Preference number: 4 (lower is better)
Translates to: LVNKWKQTPDATRPARPFSSKLI*LTASEI
Trigger: GATCTCTGAGGCAGTCAACCAGATAAGCTTGGATGA...GAAAGGCCGAGCAGGCCGTGTTGCATCTGGGGTCTGCTTCCATTTATTCACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCCAACAATTTGATTTaGGGGCACTTCATGTTTGAA +
Preference number: 4 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGSNNLI*GHFMFE
Trigger: TTCAAACATGAAGTGCCCCCAAATCAAATTGTTGGA...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp ATCTGGTATCCCACGGTCAGACCCACCCTCTCTGCTCTTTCTTTAGCAACGCGTGTAGGTTCTCATTGGTaGAATAAAATGCCACGAGCG +
Preference number: 4 (lower is better)
Translates to: IWYPTVRPTLSALSLATRVGSHW*NKMPRA
Trigger: CGCTCGTGGCATTTTATTCCACCAATGAGAACCTAC...ACGCGTTGCTAAAGAAAGAGCAGAGAGGGTGGGTCTGACCGTGGGATACCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCACTATACTTGTGGTaGGTATTCGTTAGTAACTTG +
Preference number: 4 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGSLYLW*VFVSNL
Trigger: CAAGTTACTAACGAATACCCACCACAAGTATAGTGA...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp CACCTGATGGGAAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACGGCTACCTTCTCAGGTaGTCCATTCAGAGAATCATC +
Preference number: 4 (lower is better)
Translates to: HLMGSSYKTDPTIIQGDNGYLLR*SIQRII
Trigger: GATGATTCTCTGAATGGACCACCTGAGAAGGTAGCC...GTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTTCCCATCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp CCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTTCCCAGGTGAGCTCAGCAGCACTCCCGTaGTGCAGTATAACAGTCTGG +
Preference number: 4 (lower is better)
Translates to: PNRSLVRGRGSAVISQVSSAALP*CSITVW
Trigger: CCAGACTGTTATACTGCACCACGGGAGTGCTGCTGA...GCTCACCTGGGAAATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTTTCCATCCCTTTGCTaGCATCATATCTCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGFPSLC*HHISFL
Trigger: AAGAAAAGAGATATGATGCCAGCAAAGGGATGGAAA...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp TCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTACACAGCTGTTCCAATaGCACTCTTTGTATTTCTGG +
Preference number: 4 (lower is better)
Translates to: SSTRASPNRSLVRGRGSATQLFQ*HSLYFW
Trigger: CCAGAAATACAAAGAGTGCCATTGGAACAGCTGTGT...AGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp GACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGCACTCCAAATTGTGCTaGGAGTGGCCAAGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: DTPNCAGSGQGFVRNGPKHSKLC*EWPRLC
Trigger: ACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTG...CTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp CTAGTGAATAAATGGAAGCAGACCCCAGATGCAACACGGCCTGCTCGGCCTTTCGACAGCGTTCAGTATTaGAACCATACCTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: LVNKWKQTPDATRPARPFDSVQY*NHTWKV
Trigger: AACTTTCCAGGTATGGTTTCAATACTGAACGCTGTC...GAAAGGCCGAGCAGGCCGTGTTGCATCTGGGGTCTGCTTCCATTTATTCACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp CAGACCCCAGATGCAACACGGCCTGCTCGGCCTTTCCTTTGTAGAGCATTAGCTATTCTTCCAACAATTTaGTTTGGGGGCACTTCATGT +
Preference number: 4 (lower is better)
Translates to: QTPDATRPARPFLCRALAILPTI*FGGTSC
Trigger: ACATGAAGTGCCCCCAAATCAAATTGTTGGAAGAAT...AGCTAATGCTCTACAAAGGAAAGGCCGAGCAGGCCGTGTTGCATCTGGGGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp GCCTTCTCAGCAGCACTCCCGTGGTGCAGTATAACAGTCTGGTGGCTGAGGACTGAACTTCATCAACAATaGTATGGGAAACTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: AFSAALPWCSITVWWLRTELHQQ*YGKLLV
Trigger: TACAAGGAGTTTCCCATATCATTGTTGATGAAGTTC...AGTCCTCAGCCACCAGACTGTTATACTGCACCACGGGAGTGCTGCTGAGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp AAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTTGGCTGGCACTGCATCTTTaGCAGAATCCTGATCCTGGA +
Preference number: 4 (lower is better)
Translates to: KALLEMALRVYTLPQLPWLALHL*QNPDPG
Trigger: TCCAGGATCAGGATTCTGTCAAAGATGCAGTGCCAG...CCAAGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp AAGGGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACATTGTTTTGATGACTaGCTTGCTAACCCCTTTATA +
Preference number: 4 (lower is better)
Translates to: KGIYTASAALGFMPWAPPHCFDD*LANPFI
Trigger: TATAAAGGGGTTAGCAAGTCAGTCATCAAAACAATG...TGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp GACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGACGAACTCTCCTCTTTaGAGCTGCACATTCACTTGG +
Preference number: 4 (lower is better)
Translates to: DTPNCAGSGQGFVRNGPKTNSPL*SCTFTW
Trigger: CCAAGTGAATGTGCAGCTTCAAAGAGGAGAGTTCGT...CTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp GTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGTTATCCTGGAGAAGCTaGTCAAGTTCGCAACGAAGC +
Preference number: 4 (lower is better)
Translates to: VAKALLEMALRVYTLPQLLSWRS*SSSQRS
Trigger: GCTTCGTTGCGAACTTGATCAGCTTCTCCAGGATAA...CAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp AAGGGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACAGATAATCACTGTTTaGGAATGCAAATTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: KGIYTASAALGFMPWAPPQIITV*ECKFQL
Trigger: AAGCTGGAATTTGCATTCGCAAACAGTGATTATCTG...TGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp TCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGCAGTAATTATAACTTaGACGCACGCCTTCTTTTGT +
Preference number: 4 (lower is better)
Translates to: SSTRASPNRSLVRGRGSAAVIIT*THAFFC
Trigger: ACAAAAGAAGGCGTGCGTGCAAGTTATAATTACTGC...AGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp GGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCACTCTACTATAACAGGTaGAGGACCGTCATCCTCATC +
Preference number: 4 (lower is better)
Translates to: GSGQGFVRNGPKGIYTASLYYNR*RTVILI
Trigger: GATGAGGATGACGGTCCTGCACCTGTTATAGTAGAG...TGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR GCA 90 bp CAGACCCCAGATGCAACACGGCCTGCTCGGCCTTTCCTTTGTAGAGCATTAGCTGACTTTCCATCCCTTTaGTGGCATCATATCTCTTTT +
Preference number: 4 (lower is better)
Translates to: QTPDATRPARPFLCRALADFPSL*WHHISF
Trigger: AAAAGAGATATGATGCCAGCAAAGGGATGGAAAGTC...AGCTAATGCTCTACAAAGGAAAGGCCGAGCAGGCCGTGTTGCATCTGGGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp TCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTCAAACAACATTAGTTTaGCAATTCTCACATCCACGG +
Preference number: 4 (lower is better)
Translates to: SSTRASPNRSLVRGRGSAQTTLV*QFSHPR
Trigger: CCGTGGATGTGAGAATTGGCAAACTAATGTTGTTTG...AGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp AAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTTGGAGGCTGGCCATTTCCTaGAGAACTCTTCCAGACAAG +
Preference number: 4 (lower is better)
Translates to: KALLEMALRVYTLPQLPWRLAIS*RTLPDK
Trigger: CTTGTCTGGAAGAGTTCTGCAGGAAATGGCCAGCCT...CCAAGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp CCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTTCCCAGGTGAGCAGGCTGGCCATTTCCTaGAGAACTCTTCCAGACAAG +
Preference number: 4 (lower is better)
Translates to: PNRSLVRGRGSAVISQVSRLAIS*RTLPDK
Trigger: CTTGTCTGGAAGAGTTCTGCAGGAAATGGCCAGCCT...GCTCACCTGGGAAATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp GTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGTTTCTCAATTTCCCTTaGTCTGAGCCCTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: VAKALLEMALRVYTLPQLFLNFP*SEPFPC
Trigger: GCAAGGGAAGGGCTCAGAGCAAGGGAAATTGAGAAA...CAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp GTCCTCTCAGTTCCTTACTCAGGCCTAGAGTGGTTCGTGCTCTCAGTGGAACTCCTTTCTCCTTCATTATaGTCTTGCTGGCTCATCTCT +
Preference number: 4 (lower is better)
Translates to: VLSVPYSGLEWFVLSVELLSPSL*SCWLIS
Trigger: AGAGATGAGCCAGCAAGACCATAATGAAGGAGAAAG...GAGTTCCACTGAGAGCACGAACCACTCTAGGCCTGAGTAAGGAACTGAGAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442331.1
CDS-3UTR CCA 90 bp CAAGTGCTGCGGCACTGTCTACTACCTAGCTTTTCCTACTTGCATTTTTGCTCCTACTCAGGCCTAGAGTaGTTCGTGCTCTCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: QVLRHCLLPSFSYLHFCSYSGLE*FVLSVE
Trigger: TTCCACTGAGAGCACGAACCACTCTAGGCCTGAGTA...GGAGCAAAAATGCAAGTAGGAAAAGCTAGGTAGTAGACAGTGCCGCAGCACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442331.1
CDS-3UTR CCA 90 bp AAGGGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCATACTTTCTTTTGGCTTaGATTTGCGGAATCTACTTG +
Preference number: 4 (lower is better)
Translates to: KGIYTASAALGFMPWAPPYFLLA*ICGIYL
Trigger: CAAGTAGATTCCGCAAATCCAAGCCAAAAGAAAGTA...TGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp AAGGGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCATTTGGTACTTTCTTTTaGCTTGGATTTGCGGAATCT +
Preference number: 4 (lower is better)
Translates to: KGIYTASAALGFMPWAPPFGTFF*LGFAES
Trigger: AGATTCCGCAAATCCAAGCCAAAAGAAAGTACCAAA...TGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp AAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACGAACTCTCCTCTCTTGCAGAATGGACTaGAACTGTCTGGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: KQLQNGSNHHPGRQRTLLSCRMD*NCLEAC
Trigger: ACAGGCTTCCAGACAGTTCCAGTCCATTCTGCAAGA...GAGGAGAGTTCGTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp ACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTGGCTACCTTCTCAGGTaGTCCATTCAGAGAATCATC +
Preference number: 4 (lower is better)
Translates to: TRASPNRSLVRGRGSAVIGYLLR*SIQRII
Trigger: GATGATTCTCTGAATGGACCACCTGAGAAGGTAGCC...AATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp AAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTTGGCTTTCTAACCGAATCTaGTATCCCACGGTCAGACCC +
Preference number: 4 (lower is better)
Translates to: KALLEMALRVYTLPQLPWLSNRI*YPTVRP
Trigger: GGGTCTGACCGTGGGATACCAGATTCGGTTAGAAAG...CCAAGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp GGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCATACAAGTATAGCACCTaGAGGGTAGGAGTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: GSGQGFVRNGPKGIYTASYKYST*RVGVLS
Trigger: GGAAAGCACTCCTACCCTCCAGGTGCTATACTTGTA...TGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp AAGGGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCATTTCCATCCCTTTGCTaGCATCATATCTCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: KGIYTASAALGFMPWAPPFPSLC*HHISFL
Trigger: AAGAAAAGAGATATGATGCCAGCAAAGGGATGGAAA...TGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp GACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGAAGAGAATCGGTGTGTaGAGGTTCAATGAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: DTPNCAGSGQGFVRNGPKKRIGV*RFNEPR
Trigger: TCTCGGCTCATTGAACCTCCACACACCGATTCTCTT...CTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp AAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTTGGAGCTGCACATTCACTTaGCCTCCTCCAAACAAGACC +
Preference number: 4 (lower is better)
Translates to: KALLEMALRVYTLPQLPWSCTFT*PPPNKT
Trigger: GGTCTTGTTTGGAGGAGGCCAAGTGAATGTGCAGCT...CCAAGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp CCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTTCCCAGGTGAGCAGCTGCACATTCACTTaGCCTCCTCCAAACAAGACC +
Preference number: 4 (lower is better)
Translates to: PNRSLVRGRGSAVISQVSSCTFT*PPPNKT
Trigger: GGTCTTGTTTGGAGGAGGCCAAGTGAATGTGCAGCT...GCTCACCTGGGAAATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp AAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTTGGCAAAGACAGGCAAGCTaGGTTTTAGGCTCTCACCCT +
Preference number: 4 (lower is better)
Translates to: KALLEMALRVYTLPQLPWQRQAS*VLGSHP
Trigger: AGGGTGAGAGCCTAAAACCCAGCTTGCCTGTCTTTG...CCAAGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp ACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTGTCATATGTAGAGTCTaGAGGGGTACTTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: TRASPNRSLVRGRGSAVIVICRV*RGTLAL
Trigger: CAAAGCCAAAGTACCCCTTCAGACTCTACATATGAC...AATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR TCA 90 bp CCCTTGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCGACAGCGTTCAGTATTaGAACCATACCTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: PLTLQIVLGVAKALLEMADSVQY*NHTWKV
Trigger: AACTTTCCAGGTATGGTTTCAATACTGAACGCTGTC...GGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR TCA 90 bp CCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTTCCCAGGTGAGCATCCTCAGGACCGCTTaGCAGCGTTCAGTATTGAAA +
Preference number: 4 (lower is better)
Translates to: PNRSLVRGRGSAVISQVSILRTA*QRSVLK
Trigger: TTTCAATACTGAACGCTGTCAAGCGGTCCTGAGGAT...GCTCACCTGGGAAATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR TCA 90 bp CCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTTCCCAGGTGAGCACGAACTCTCCTCTTTaGAGCTGCACATTCACTTGG +
Preference number: 4 (lower is better)
Translates to: PNRSLVRGRGSAVISQVSTNSPL*SCTFTW
Trigger: CCAAGTGAATGTGCAGCTTCAAAGAGGAGAGTTCGT...GCTCACCTGGGAAATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp TCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTCAGATAATCACTGTTTaGGAATGCAAATTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SSTRASPNRSLVRGRGSAQIITV*ECKFQL
Trigger: AAGCTGGAATTTGCATTCGCAAACAGTGATTATCTG...AGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp CTAGTGAATAAATGGAAGCAGACCCCAGATGCAACACGGCCTGCTCGGCCTTTCGCAGTAATTATAACTTaGACGCACGCCTTCTTTTGT +
Preference number: 4 (lower is better)
Translates to: LVNKWKQTPDATRPARPFAVIIT*THAFFC
Trigger: ACAAAAGAAGGCGTGCGTGCAAGTTATAATTACTGC...GAAAGGCCGAGCAGGCCGTGTTGCATCTGGGGTCTGCTTCCATTTATTCACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp ACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTCTCCTTTGCCTGGCTTaGCTTTTCTTCTTACTGAAG +
Preference number: 4 (lower is better)
Translates to: TRASPNRSLVRGRGSAVILLCLA*LFFLLK
Trigger: CTTCAGTAAGAAGAAAAGGCAAGCCAGGCAAAGGAG...AATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR GCA 90 bp CCCTTGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCTACCTGGAAAGTTTTTaGACTGCAAATGGGGAGACT +
Preference number: 4 (lower is better)
Translates to: PLTLQIVLGVAKALLEMAYLESF*TANGET
Trigger: AGTCTCCCCATTTGCAGTGCAAAAACTTTCCAGGTA...GGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR GCA 90 bp GACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGCTGTTGATCTGGCACTaGATCTTTGACAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: DTPNCAGSGQGFVRNGPKLLIWH*IFDRIL
Trigger: CAGGATTCTGTCAAAGATGCAGTGCCAGATCAACAG...CTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp ACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTCTGTTGATCTGGCACTaGATCTTTGACAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: TRASPNRSLVRGRGSAVILLIWH*IFDRIL
Trigger: CAGGATTCTGTCAAAGATGCAGTGCCAGATCAACAG...AATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp AAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTTGGTTTCTCAATTTCCCTTaGTCTGAGCCCTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: KALLEMALRVYTLPQLPWFLNFP*SEPFPC
Trigger: GCAAGGGAAGGGCTCAGAGCAAGGGAAATTGAGAAA...CCAAGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp CAAGTGCTGCGGCACTGTCTACTACCTAGCTTTTCCTACTTGCATTTTTGCTCCGGTTCGTGCTCTCAGTaGAACTCAGCAGAATGTTTC +
Preference number: 4 (lower is better)
Translates to: QVLRHCLLPSFSYLHFCSGSCSQ*NSAECF
Trigger: GAAACATTCTGCTGAGTTCCACTGAGAGCACGAACC...GGAGCAAAAATGCAAGTAGGAAAAGCTAGGTAGTAGACAGTGCCGCAGCACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442331.1
CDS-3UTR CCA 90 bp ATGATGTTGGCTACCTTCTCAGGTGGTCCATTCAGAGAATCATCCAGAATAAACAGGTTCCTGTCCAGCTaGCCAGTACCGCTCATCGTT +
Preference number: 4 (lower is better)
Translates to: MMLATFSGGPFRESSRINRFLSS*PVPLIV
Trigger: AACGATGAGCGGTACTGGCCAGCTGGACAGGAACCT...GTTTATTCTGGATGATTCTCTGAATGGACCACCTGAGAAGGTAGCCAACATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp GACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGTCATCCAAGCTTATCTaGTTGACTGCCTCAGAGATC +
Preference number: 4 (lower is better)
Translates to: DTPNCAGSGQGFVRNGPKSSKLI*LTASEI
Trigger: GATCTCTGAGGCAGTCAACCAGATAAGCTTGGATGA...CTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp TCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTTCATCAACAATGATATaGGAAACTCCTTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: SSTRASPNRSLVRGRGSASSTMI*ETPCRA
Trigger: AGCTCTACAAGGAGTTTCCCATATCATTGTTGATGA...AGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp CCCTTGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCAGGAAATGTACGACCTaGTATAGTAATAACGGGGCA +
Preference number: 4 (lower is better)
Translates to: PLTLQIVLGVAKALLEMARKCTT*YSNNGA
Trigger: TGCCCCGTTATTACTATACCAGGTCGTACATTTCCT...GGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp AAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTTGGAAGAGAATCGGTGTGTaGAGGTTCAATGAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: KALLEMALRVYTLPQLPWKRIGV*RFNEPR
Trigger: TCTCGGCTCATTGAACCTCCACACACCGATTCTCTT...CCAAGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp GGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCACACCTGCACTACATTTaGATACAAAGCAGCACACAG +
Preference number: 4 (lower is better)
Translates to: GSGQGFVRNGPKGIYTASHLHYI*IQSSTQ
Trigger: CTGTGTGCTGCTTTGTATCCAAATGTAGTGCAGGTG...TGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp CTTGAAGACCTGGCCTCTGCGATACAATGTCCTTCAAAACTAGCAGCAAGAAGTAGCTGCACATTCACTTaGCCTCCTCCAAACAAGACC +
Preference number: 4 (lower is better)
Translates to: LEDLASAIQCPSKLAARSSCTFT*PPPNKT
Trigger: GGTCTTGTTTGGAGGAGGCCAAGTGAATGTGCAGCT...ACTTCTTGCTGCTAGTTTTGAAGGACATTGTATCGCAGAGGCCAGGTCTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp CCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTTCCCAGGTGAGCATCCATCGTTCTTGGTaGCAAACTTCAACTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PNRSLVRGRGSAVISQVSIHRSW*QTSTQL
Trigger: CAGCTGAGTTGAAGTTTGTCACCAAGAACGATGGAT...GCTCACCTGGGAAATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR GCA 90 bp TGTTTTGACTGGAATTCCAACTCCAAGTGCTGCGGCACTGTCTACTACCTAGCTTCCTACTTGCATTTTTaGTCCTGTCCTCTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: CFDWNSNSKCCGTVYYLASYLHF*SCPLSS
Trigger: GGAACTGAGAGGACAGGAGCAAAAATGCAAGTAGGA...AGCTAGGTAGTAGACAGTGCCGCAGCACTTGGAGTTGGAATTCCAGTCAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442331.1
CDS-3UTR GCA 90 bp CACCTGATGGGAAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACCTTTTGGCTTGGATTTaGGGAATCTACTTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: HLMGSSYKTDPTIIQGDNLLAWI*GIYLSD
Trigger: ATCTGACAAGTAGATTCCGCAAATCCAAGCCAAAAG...GTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTTCCCATCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp GCAGGATCCAAACAGCGGAAGATAGACCCAAACAACATTAGTTTGCCAATTCTCCAAGCAGGGAGTGATTaGCTCTCTTGCAGAATGGAC +
Preference number: 4 (lower is better)
Translates to: AGSKQRKIDPNNISLPILQAGSD*LSCRMD
Trigger: GTCCATTCTGCAAGAGAGGCAATCACTCCCTGCTTG...GAGAATTGGCAAACTAATGTTGTTTGGGTCTATCTTCCGCTGTTTGGATCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp CCCTTGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCTTTACAAACACAGCCTaGTGCTCTTCACTGGATAAA +
Preference number: 4 (lower is better)
Translates to: PLTLQIVLGVAKALLEMAFTNTA*CSSLDK
Trigger: TTTATCCAGTGAAGAGCAGCAGGCTGTGTTTGTAAA...GGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp CCCTTGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCGACTTTCCATCCCTTTaGTGGCATCATATCTCTTTT +
Preference number: 4 (lower is better)
Translates to: PLTLQIVLGVAKALLEMADFPSL*WHHISF
Trigger: AAAAGAGATATGATGCCAGCAAAGGGATGGAAAGTC...GGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp ATCAAGTTCGCAACGAAGCTCCTTTACCAGTTCAGCCACCTGATGGGAAGCAGCTCTGGGCTTTTCACCTaGACTACATTTGGATACAAA +
Preference number: 4 (lower is better)
Translates to: IKFATKLLYQFSHLMGSSSGLFT*TTFGYK
Trigger: TTTGTATCCAAATGTAGTGCAGGTGAAAAGCCCAGA...GCTGCTTCCCATCAGGTGGCTGAACTGGTAAAGGAGCTTCGTTGCGAACTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp AAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTTGGCCAGTTCTAACCCAATaGTCCAGACTCTGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: KALLEMALRVYTLPQLPWPVLTQ*SRLCSE
Trigger: TTCAGAACAGAGTCTGGACCATTGGGTTAGAACTGG...CCAAGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp CCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTTCCCAGGTGAGCGTAGGTTCTCATTGGTaGAATAAAATGCCACGAGCG +
Preference number: 4 (lower is better)
Translates to: PNRSLVRGRGSAVISQVSVGSHW*NKMPRA
Trigger: CGCTCGTGGCATTTTATTCCACCAATGAGAACCTAC...GCTCACCTGGGAAATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp GACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGAATAACTTGAAGACCTaGCCTCTGCGATACAATGTC +
Preference number: 4 (lower is better)
Translates to: DTPNCAGSGQGFVRNGPKNNLKT*PLRYNV
Trigger: GACATTGTATCGCAGAGGCCAGGTCTTCAAGTTATT...CTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp GTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGAGGAAATGTACGACCTaGTATAGTAATAACGGGGCA +
Preference number: 4 (lower is better)
Translates to: VAKALLEMALRVYTLPQLRKCTT*YSNNGA
Trigger: TGCCCCGTTATTACTATACCAGGTCGTACATTTCCT...CAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp GACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGTTGAAATCTGTTTCATaGACCGCATATATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: DTPNCAGSGQGFVRNGPKLKSVS*TAYMGS
Trigger: GGAGCCCATATATGCGGTCCATGAAACAGATTTCAA...CTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp GTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTGCTGCTCTTCACTaGATAAAGATGAATGAAGTG +
Preference number: 4 (lower is better)
Translates to: VAKALLEMALRVYTLPQLPAALH*IKMNEV
Trigger: CACTTCATTCATCTTTATCCAGTGAAGAGCAGCAGG...CAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp AAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACGAACTCTCCTCACACAGCTGTTCCAATaGCACTCTTTGTATTTCTGG +
Preference number: 4 (lower is better)
Translates to: KQLQNGSNHHPGRQRTLLTQLFQ*HSLYFW
Trigger: CCAGAAATACAAAGAGTGCCATTGGAACAGCTGTGT...GAGGAGAGTTCGTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp GACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGTTGCTGATATCAGCTTaGGGTTCTCAGCATTTGAGT +
Preference number: 4 (lower is better)
Translates to: DTPNCAGSGQGFVRNGPKLLISA*GSQHLS
Trigger: ACTCAAATGCTGAGAACCCCAAGCTGATATCAGCAA...CTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp GACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGCTGAAATTTTCCTTCTaGGCTTTTCACCTGCACTAC +
Preference number: 4 (lower is better)
Translates to: DTPNCAGSGQGFVRNGPKLKFSF*AFHLHY
Trigger: GTAGTGCAGGTGAAAAGCCCAGAAGGAAAATTTCAG...CTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457308.6
3UTR CAA 72 bp TTGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTaGTTAGAAATGGCCCTAAGGGTATATACACTGCCT +
Preference number: 4 (lower is better)
Translates to: LTLQIVLGVAKA*LEMALRVYTLP
Trigger: AGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
3UTR CAA 72 bp TCCAAACAGCGGAAGATAGACCCAAACAACATTAGTTaGCCAATTCTCACATCCACGGGCAGAGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: SKQRKIDPNNIS*PILTSTGREAK
Trigger: TTTGGCCTCTCTGCCCGTGGATGTGAGAATTGGCAAACTAATGTTGTTTGGGTCTATCTTCCGCTGTTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR CAA 72 bp AACCCTATATCCGATAACAGTTCCGTGAATTGTCGTTaGAGGCTGGCCATTTCCTGCAGAACTCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: NPISDNSSVNCR*RLAISCRTLPD
Trigger: GTCTGGAAGAGTTCTGCAGGAAATGGCCAGCCTCAAACGACAATTCACGGAACTGTTATCGGATATAGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp GGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCCTTTTCTTCTTACTaGAGAACTCATTTTCACCTG +
Preference number: 4 (lower is better)
Translates to: GSGQGFVRNGPKGIYTASAFSSY*RTHFHL
Trigger: CAGGTGAAAATGAGTTCTTCAGTAAGAAGAAAAGGC...TGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR TCA 90 bp GCAGGATCCAAACAGCGGAAGATAGACCCAAACAACATTAGTTTGCCAATTCTCCAGTCATACCACTTATaGCAACCACCTGGTGCTTAC +
Preference number: 4 (lower is better)
Translates to: AGSKQRKIDPNNISLPILQSYHL*QPPGAY
Trigger: GTAAGCACCAGGTGGTTGTCATAAGTGGTATGACTG...GAGAATTGGCAAACTAATGTTGTTTGGGTCTATCTTCCGCTGTTTGGATCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp CCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTTCCCAGGTGAGCCTCATTAAAATAACTTaGAGACCTGGCCTCTGCGAT +
Preference number: 4 (lower is better)
Translates to: PNRSLVRGRGSAVISQVSLIKIT*RPGLCD
Trigger: ATCGCAGAGGCCAGGTCTTCAAGTTATTTTAATGAG...GCTCACCTGGGAAATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp CACCTGATGGGAAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACCATTGTTTTGATGACTaGCTTGCTAACCCCTTTATA +
Preference number: 4 (lower is better)
Translates to: HLMGSSYKTDPTIIQGDNHCFDD*LANPFI
Trigger: TATAAAGGGGTTAGCAAGTCAGTCATCAAAACAATG...GTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTTCCCATCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp CCCTTGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCGTTCATAAAGCATTTTaGTTTCTGCTAGTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: PLTLQIVLGVAKALLEMAVHKAF*FLLVLV
Trigger: TACCAGGACTAGCAGAAATCAAAATGCTTTATGAAC...GGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp AATCGTATTTTTGAGGCACGAAGAGAATCGGTGTGTGGAGGTTCAATGAGCCGAATTTTGGTTGCATTCTaGCAGCTCCAGTACTGGTCT +
Preference number: 4 (lower is better)
Translates to: NRIFEARRESVCGGSMSRILVAF*QLQYWS
Trigger: AGACCAGTACTGGAGCTGTCAGAATGCAACCAAAAT...TCGGCTCATTGAACCTCCACACACCGATTCTCTTCGTGCCTCAAAAATACGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp ATGATGTTGGCTACCTTCTCAGGTGGTCCATTCAGAGAATCATCCAGAATAAACCACTGGGTAAGGAGATaGTCTAGTGATGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: MMLATFSGGPFRESSRINHWVRR*SSDAPT
Trigger: TGTGGGAGCATCACTAGAGCATCTCCTTACCCAGTG...GTTTATTCTGGATGATTCTCTGAATGGACCACCTGAGAAGGTAGCCAACATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp ACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTTGTACTGACTTTGCCTaGCAGTCATATCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: TRASPNRSLVRGRGSAVICTDFA*QSYLLE
Trigger: TTCCAAAAGATATGACTGGCAGGCAAAGTCAGTACA...AATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR GCA 90 bp GTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGATGACAACCACCTGGTaGTTACGCAATAAGTTAAGA +
Preference number: 4 (lower is better)
Translates to: VAKALLEMALRVYTLPQLMTTTW*LRNKLR
Trigger: TCTTAACTTATTGCGTAAGCACCAGGTGGTTGTCAT...CAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR GCA 90 bp GGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCACAAACAACATTAGTTTaGCAATTCTCACATCCACGG +
Preference number: 4 (lower is better)
Translates to: GSGQGFVRNGPKGIYTASQTTLV*QFSHPR
Trigger: CCGTGGATGTGAGAATTGGCAAACTAATGTTGTTTG...TGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp GCAGTCTCGGATGAATACTCGACTAGTTTTTATCTTCTCGTGGTACAACAGGTAGGGGTACTTTGGCTTTaGGTTTCCATTTTGGGCGTG +
Preference number: 4 (lower is better)
Translates to: AVSDEYSTSFYLLVVQQVGVLWL*VSILGV
Trigger: CACGCCCAAAATGGAAACCCAAAGCCAAAGTACCCC...TACCTGTTGTACCACGAGAAGATAAAAACTAGTCGAGTATTCATCCGAGACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp CCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTTCCCAGGTGAGCTCTGAAGGGGTACTTTaGCTTTGGGTTTCCATTTTG +
Preference number: 4 (lower is better)
Translates to: PNRSLVRGRGSAVISQVSSEGVL*LWVSIL
Trigger: CAAAATGGAAACCCAAAGCCAAAGTACCCCTTCAGA...GCTCACCTGGGAAATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp ACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTTTTTTGCACTGCAAATaGGGAGACTGTAAATTCTGG +
Preference number: 4 (lower is better)
Translates to: TRASPNRSLVRGRGSAVIFLHCK*GDCKFW
Trigger: CCAGAATTTACAGTCTCCCCATTTGCAGTGCAAAAA...AATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CCA 90 bp CCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTTCCCAGGTGAGCAATAACTTGAAGACCTaGCCTCTGCGATACAATGTC +
Preference number: 4 (lower is better)
Translates to: PNRSLVRGRGSAVISQVSNNLKT*PLRYNV
Trigger: GACATTGTATCGCAGAGGCCAGGTCTTCAAGTTATT...GCTCACCTGGGAAATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp ACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTAGACAACATCATCGATaGTTATGGATGTCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: TRASPNRSLVRGRGSAVIRQHHR*LWMSQQ
Trigger: TTGCTGAGACATCCATAACCATCGATGATGTTGTCT...AATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CCA 90 bp CTTGAAGACCTGGCCTCTGCGATACAATGTCCTTCAAAACTAGCAGCAAGAAGTCACCTGCACTACATTTaGATACAAAGCAGCACACAG +
Preference number: 4 (lower is better)
Translates to: LEDLASAIQCPSKLAARSHLHYI*IQSSTQ
Trigger: CTGTGTGCTGCTTTGTATCCAAATGTAGTGCAGGTG...ACTTCTTGCTGCTAGTTTTGAAGGACATTGTATCGCAGAGGCCAGGTCTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR CAA 72 bp GGCCATTTCCTGCAGAACTCTTCCAGACAAGAAGTTTaGTCTGCAGTAATTATAACTTGCACGCACGCCTTC +
Preference number: 4 (lower is better)
Translates to: GHFLQNSSRQEV*SAVIITCTHAF
Trigger: GAAGGCGTGCGTGCAAGTTATAATTACTGCAGACAAAACTTCTTGTCTGGAAGAGTTCTGCAGGAAATGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR CAA 72 bp CCTGCACTACATTTGGATACAAAGCAGCACACAGCATaGCTGATATCAGCTTGGGGTTCTCAGCATTTGAGT +
Preference number: 4 (lower is better)
Translates to: PALHLDTKQHTA*LISAWGSQHLS
Trigger: ACTCAAATGCTGAGAACCCCAAGCTGATATCAGCAATGCTGTGTGCTGCTTTGTATCCAAATGTAGTGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp TTTAATTTTATCCTGGAGAAGCTGATCAAGTTCGCAACGAAGCTCCTTTACCAGCTGGCACTGCATCTTTaGCAGAATCCTGATCCTGGA +
Preference number: 4 (lower is better)
Translates to: FNFILEKLIKFATKLLYQLALHL*QNPDPG
Trigger: TCCAGGATCAGGATTCTGTCAAAGATGCAGTGCCAG...CTGGTAAAGGAGCTTCGTTGCGAACTTGATCAGCTTCTCCAGGATAAAATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp GGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCATTAAAATCTAACTGTTaGTCTGGCACTGCATCTTTG +
Preference number: 4 (lower is better)
Translates to: GSGQGFVRNGPKGIYTASLKSNC*SGTASL
Trigger: CAAAGATGCAGTGCCAGATCAACAGTTAGATTTTAA...TGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp ACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTCATTGTTTTGATGACTaGCTTGCTAACCCCTTTATA +
Preference number: 4 (lower is better)
Translates to: TRASPNRSLVRGRGSAVIHCFDD*LANPFI
Trigger: TATAAAGGGGTTAGCAAGTCAGTCATCAAAACAATG...AATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp GGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAACAGACTGGAGATTATaGGCACTAAACATCTCTAAA +
Preference number: 4 (lower is better)
Translates to: GSGQGFVRNGPKGIYTASTDWRL*ALNISK
Trigger: TTTAGAGATGTTTAGTGCTCATAATCTCCAGTCTGT...TGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp AAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTTGGAAACTTCAACTCAGCTaGTTTTGGTTGCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: KALLEMALRVYTLPQLPWKLQLS*FWLHSD
Trigger: GTCAGAATGCAACCAAAATCAGCTGAGTTGAAGTTT...CCAAGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR TCA 90 bp TTTAATTTTATCCTGGAGAAGCTGATCAAGTTCGCAACGAAGCTCCTTTACCAGACCAGTTCAGCCACCTaGTGGGAAGCAGCTACAAAA +
Preference number: 4 (lower is better)
Translates to: FNFILEKLIKFATKLLYQTSSAT*WEAATK
Trigger: TTTTGTAGCTGCTTCCCATCAGGTGGCTGAACTGGT...CTGGTAAAGGAGCTTCGTTGCGAACTTGATCAGCTTCTCCAGGATAAAATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp TCCTTACTCAGGCCTAGAGTGGTTCGTGCTCTCAGTGGAACTCAGCAGAATGTTCAGATAATCACTGTTTaGGAATGCAAATTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SLLRPRVVRALSGTQQNVQIITV*ECKFQL
Trigger: AAGCTGGAATTTGCATTCGCAAACAGTGATTATCTG...AACATTCTGCTGAGTTCCACTGAGAGCACGAACCACTCTAGGCCTGAGTAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442331.1
CDS-3UTR GCA 90 bp AAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTTGGGCAGTAATTATAACTTaGACGCACGCCTTCTTTTGT +
Preference number: 4 (lower is better)
Translates to: KALLEMALRVYTLPQLPWAVIIT*THAFFC
Trigger: ACAAAAGAAGGCGTGCGTGCAAGTTATAATTACTGC...CCAAGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp AATGCTTGGGTTTTTAATTTTATCCTGGAGAAGCTGATCAAGTTCGCAACGAAGCAGACCCACCCTCTCTaGTCTTTCTTTAGCAACGCG +
Preference number: 4 (lower is better)
Translates to: NAWVFNFILEKLIKFATKQTHPL*SFFSNA
Trigger: CGCGTTGCTAAAGAAAGAGCAGAGAGGGTGGGTCTG...CTTCGTTGCGAACTTGATCAGCTTCTCCAGGATAAAATTAAAAACCCAAGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp AAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTTGGTTTACAAACACAGCCTaGTGCTCTTCACTGGATAAA +
Preference number: 4 (lower is better)
Translates to: KALLEMALRVYTLPQLPWFTNTA*CSSLDK
Trigger: TTTATCCAGTGAAGAGCAGCAGGCTGTGTTTGTAAA...CCAAGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp AAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTTGGGACTTTCCATCCCTTTaGTGGCATCATATCTCTTTT +
Preference number: 4 (lower is better)
Translates to: KALLEMALRVYTLPQLPWDFPSL*WHHISF
Trigger: AAAAGAGATATGATGCCAGCAAAGGGATGGAAAGTC...CCAAGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp AAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTTGGTCTGGGCTTTTCACCTaGACTACATTTGGATACAAA +
Preference number: 4 (lower is better)
Translates to: KALLEMALRVYTLPQLPWSGLFT*TTFGYK
Trigger: TTTGTATCCAAATGTAGTGCAGGTGAAAAGCCCAGA...CCAAGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR GCA 90 bp GTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGTCAAAGTGTCTCACCTaGACTACATTTGGATACAAA +
Preference number: 4 (lower is better)
Translates to: VAKALLEMALRVYTLPQLSKCLT*TTFGYK
Trigger: TTTGTATCCAAATGTAGTGCAGGTGAGACACTTTGA...CAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452978.5
CDS-3UTR CCA 90 bp CTTGAAGACCTGGCCTCTGCGATACAATGTCCTTCAAAACTAGCAGCAAGAAGTTCTGAAGGGGTACTTTaGCTTTGGGTTTCCATTTTG +
Preference number: 4 (lower is better)
Translates to: LEDLASAIQCPSKLAARSSEGVL*LWVSIL
Trigger: CAAAATGGAAACCCAAAGCCAAAGTACCCCTTCAGA...ACTTCTTGCTGCTAGTTTTGAAGGACATTGTATCGCAGAGGCCAGGTCTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp GCAGTCTCGGATGAATACTCGACTAGTTTTTATCTTCTCGTGGTACAACAGGTATACAAGTATAGCACCTaGAGGGTAGGAGTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: AVSDEYSTSFYLLVVQQVYKYST*RVGVLS
Trigger: GGAAAGCACTCCTACCCTCCAGGTGCTATACTTGTA...TACCTGTTGTACCACGAGAAGATAAAAACTAGTCGAGTATTCATCCGAGACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp CCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTTCCCAGGTGAGCAGACAACATCATCGATaGTTATGGATGTCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: PNRSLVRGRGSAVISQVSRQHHR*LWMSQQ
Trigger: TTGCTGAGACATCCATAACCATCGATGATGTTGTCT...GCTCACCTGGGAAATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
3UTR CAA 72 bp CTGGAGTTAATGCTCCTAAGTCTCGTAATCGTATTTTaGAGGCACGAAGAGAATCGGTGTGTGGAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: LELMLLSLVIVF*RHEENRCVEVQ
Trigger: TTGAACCTCCACACACCGATTCTCTTCGTGCCTCAAAAATACGATTACGAGACTTAGGAGCATTAACTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp TCCAACTCCAAGTGCTGCGGCACTGTCTACTACCTAGCTTTTCCTACTTGCATTAAATGCTGTTTGTTTTaGCTGGAATTCCAACTCCAA +
Preference number: 4 (lower is better)
Translates to: SNSKCCGTVYYLAFPTCIKCCLF*LEFQLQ
Trigger: TTGGAGTTGGAATTCCAGTCAAAACAAACAGCATTT...AATGCAAGTAGGAAAAGCTAGGTAGTAGACAGTGCCGCAGCACTTGGAGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442331.1
CDS-3UTR TCA 90 bp AAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTTGGTTAAAATCTAACTGTTaGTCTGGCACTGCATCTTTG +
Preference number: 4 (lower is better)
Translates to: KALLEMALRVYTLPQLPWLKSNC*SGTASL
Trigger: CAAAGATGCAGTGCCAGATCAACAGTTAGATTTTAA...CCAAGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR TCA 90 bp CTCAGCAATGTTGGTGGAAATTATAATCTTAGTTACTCCTGCAGGAGGTTTTACAGCACACAGCATTGCTaGTATCAGCTTGGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: LSNVGGNYNLSYSCRRFYSTQHC*YQLGVL
Trigger: GAGAACCCCAAGCTGATATCAGCAATGCTGTGTGCT...GTAAAACCTCCTGCAGGAGTAACTAAGATTATAATTTCCACCAACATTGCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp AATCGTATTTTTGAGGCACGAAGAGAATCGGTGTGTGGAGGTTCAATGAGCCGAAAACTTCAACTCAGCTaGTTTTGGTTGCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: NRIFEARRESVCGGSMSRKLQLS*FWLHSD
Trigger: GTCAGAATGCAACCAAAATCAGCTGAGTTGAAGTTT...TCGGCTCATTGAACCTCCACACACCGATTCTCTTCGTGCCTCAAAAATACGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp GCAGTCTCGGATGAATACTCGACTAGTTTTTATCTTCTCGTGGTACAACAGGTAATTGGTGGAATAAAATaGCACGAGCGGAGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: AVSDEYSTSFYLLVVQQVIGGIK*HERSLV
Trigger: TACCAAGCTCCGCTCGTGGCATTTTATTCCACCAAT...TACCTGTTGTACCACGAGAAGATAAAAACTAGTCGAGTATTCATCCGAGACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp CCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTTCCCAGGTGAGCTCATTCGGAACTGCTTaGAGATTTTACCATTTTCAG +
Preference number: 4 (lower is better)
Translates to: PNRSLVRGRGSAVISQVSSFGTA*RFYHFQ
Trigger: CTGAAAATGGTAAAATCTGCAAGCAGTTCCGAATGA...GCTCACCTGGGAAATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR GCA 90 bp ATGATGTTGGCTACCTTCTCAGGTGGTCCATTCAGAGAATCATCCAGAATAAACCTGTTGATCTGGCACTaGATCTTTGACAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: MMLATFSGGPFRESSRINLLIWH*IFDRIL
Trigger: CAGGATTCTGTCAAAGATGCAGTGCCAGATCAACAG...GTTTATTCTGGATGATTCTCTGAATGGACCACCTGAGAAGGTAGCCAACATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp CCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTTCCCAGGTGAGCAATCTTAGTTACTCCTaGAGGAGGTTTTACAAACAC +
Preference number: 4 (lower is better)
Translates to: PNRSLVRGRGSAVISQVSNLSYS*RRFYKH
Trigger: GTGTTTGTAAAACCTCCTGCAGGAGTAACTAAGATT...GCTCACCTGGGAAATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp CTTGAAGACCTGGCCTCTGCGATACAATGTCCTTCAAAACTAGCAGCAAGAAGTCAAACAACATTAGTTTaGCAATTCTCACATCCACGG +
Preference number: 4 (lower is better)
Translates to: LEDLASAIQCPSKLAARSQTTLV*QFSHPR
Trigger: CCGTGGATGTGAGAATTGGCAAACTAATGTTGTTTG...ACTTCTTGCTGCTAGTTTTGAAGGACATTGTATCGCAGAGGCCAGGTCTTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp AAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTTGGATCACTGTTTGCGAATaGAAATTCCAGCTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: KALLEMALRVYTLPQLPWITVCE*KFQLFL
Trigger: CAGAAAAAGCTGGAATTTGCATTCGCAAACAGTGAT...CCAAGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR GCA 90 bp GCAGGATCCAAACAGCGGAAGATAGACCCAAACAACATTAGTTTGCCAATTCTCTCAGCTGATTTTGGTTaGATTCTGACAGCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: AGSKQRKIDPNNISLPILSADFG*ILTAPV
Trigger: TACTGGAGCTGTCAGAATGCAACCAAAATCAGCTGA...GAGAATTGGCAAACTAATGTTGTTTGGGTCTATCTTCCGCTGTTTGGATCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp TGCGGCACTGTCTACTACCTAGCTTTTCCTACTTGCATTTTTGCTCCTGTCCTCTTTAAACACTCTCATTaGATTTTGGGTAGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: CGTVYYLAFPTCIFAPVLFKHSH*ILGRPD
Trigger: ATCAGGCCTACCCAAAATCCAATGAGAGTGTTTAAA...GAGGACAGGAGCAAAAATGCAAGTAGGAAAAGCTAGGTAGTAGACAGTGCCGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442331.1
CDS-3UTR CCA 90 bp GCAGTCTCGGATGAATACTCGACTAGTTTTTATCTTCTCGTGGTACAACAGGTACCAGTTCTAACCCAATaGTCCAGACTCTGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: AVSDEYSTSFYLLVVQQVPVLTQ*SRLCSE
Trigger: TTCAGAACAGAGTCTGGACCATTGGGTTAGAACTGG...TACCTGTTGTACCACGAGAAGATAAAAACTAGTCGAGTATTCATCCGAGACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp GCAGGATCCAAACAGCGGAAGATAGACCCAAACAACATTAGTTTGCCAATTCTCTTGAAATCTGTTTCATaGACCGCATATATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: AGSKQRKIDPNNISLPILLKSVS*TAYMGS
Trigger: GGAGCCCATATATGCGGTCCATGAAACAGATTTCAA...GAGAATTGGCAAACTAATGTTGTTTGGGTCTATCTTCCGCTGTTTGGATCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp TCTGGAGTTAATGCTCCTAAGTCTCGTAATCGTATTTTTGAGGCACGAAGAGAAAAGAGAATCGGTGTGTaGAGGTTCAATGAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: SGVNAPKSRNRIFEARREKRIGV*RFNEPR
Trigger: TCTCGGCTCATTGAACCTCCACACACCGATTCTCTT...TTCTCTTCGTGCCTCAAAAATACGATTACGAGACTTAGGAGCATTAACTCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp GCAGGATCCAAACAGCGGAAGATAGACCCAAACAACATTAGTTTGCCAATTCTCTTGCTGATATCAGCTTaGGGTTCTCAGCATTTGAGT +
Preference number: 4 (lower is better)
Translates to: AGSKQRKIDPNNISLPILLLISA*GSQHLS
Trigger: ACTCAAATGCTGAGAACCCCAAGCTGATATCAGCAA...GAGAATTGGCAAACTAATGTTGTTTGGGTCTATCTTCCGCTGTTTGGATCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR CAA 72 bp GTCTGCAGTAATTATAACTTGCACGCACGCCTTCTTTaGTACTTAGCTGCCATCCCTTATACGCTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: VCSNYNLHARLL*YLAAIPYTLVE
Trigger: TTCTACAAGCGTATAAGGGATGGCAGCTAAGTACAAAAGAAGGCGTGCGTGCAAGTTATAATTACTGCAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp AATGCTTGGGTTTTTAATTTTATCCTGGAGAAGCTGATCAAGTTCGCAACGAAGACGAACTCTCCTCTTTaGAGCTGCACATTCACTTGG +
Preference number: 4 (lower is better)
Translates to: NAWVFNFILEKLIKFATKTNSPL*SCTFTW
Trigger: CCAAGTGAATGTGCAGCTTCAAAGAGGAGAGTTCGT...CTTCGTTGCGAACTTGATCAGCTTCTCCAGGATAAAATTAAAAACCCAAGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp CTTGAAGACCTGGCCTCTGCGATACAATGTCCTTCAAAACTAGCAGCAAGAAGTATCACTGTTTGCGAATaGAAATTCCAGCTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: LEDLASAIQCPSKLAARSITVCE*KFQLFL
Trigger: CAGAAAAAGCTGGAATTTGCATTCGCAAACAGTGAT...ACTTCTTGCTGCTAGTTTTGAAGGACATTGTATCGCAGAGGCCAGGTCTTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp CTACTACCTAGCTTTTCCTACTTGCATTTTTGCTCCTGTCCTCTCAGTTCCTTAACTCTCATTGGATTTTaGGTAGGCCTGATTTTCCAC +
Preference number: 4 (lower is better)
Translates to: LLPSFSYLHFCSCPLSSLTLIGF*VGLIFH
Trigger: GTGGAAAATCAGGCCTACCCAAAATCCAATGAGAGT...TAAGGAACTGAGAGGACAGGAGCAAAAATGCAAGTAGGAAAAGCTAGGTAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000442331.1
CDS-3UTR CCA 90 bp GCAGTCTCGGATGAATACTCGACTAGTTTTTATCTTCTCGTGGTACAACAGGTACCTGCTGCTCTTCACTaGATAAAGATGAATGAAGTG +
Preference number: 4 (lower is better)
Translates to: AVSDEYSTSFYLLVVQQVPAALH*IKMNEV
Trigger: CACTTCATTCATCTTTATCCAGTGAAGAGCAGCAGG...TACCTGTTGTACCACGAGAAGATAAAAACTAGTCGAGTATTCATCCGAGACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp GCAGTCTCGGATGAATACTCGACTAGTTTTTATCTTCTCGTGGTACAACAGGTACTGAAATTTTCCTTCTaGGCTTTTCACCTGCACTAC +
Preference number: 4 (lower is better)
Translates to: AVSDEYSTSFYLLVVQQVLKFSF*AFHLHY
Trigger: GTAGTGCAGGTGAAAAGCCCAGAAGGAAAATTTCAG...TACCTGTTGTACCACGAGAAGATAAAAACTAGTCGAGTATTCATCCGAGACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620517.4
3UTR CAA 72 bp TTCCAGACAAGAAGTTTTGTCTGCAGTAATTATAACTaGCACGCACGCCTTCTTTTGTACTTAGCTGCCATC +
Preference number: 4 (lower is better)
Translates to: FQTRSFVCSNYN*HARLLLYLAAI
Trigger: GATGGCAGCTAAGTACAAAAGAAGGCGTGCGTGCAAGTTATAATTACTGCAGACAAAACTTCTTGTCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp ATTTTAATTCTTAGACACAGCTGTTCCAATGGCACTCTTTGTATTTCTGGTAGCATCCTCAGGACCGCTTaGCAGCGTTCAGTATTGAAA +
Preference number: 4 (lower is better)
Translates to: ILILRHSCSNGTLCISGSILRTA*QRSVLK
Trigger: TTTCAATACTGAACGCTGTCAAGCGGTCCTGAGGAT...GCTACCAGAAATACAAAGAGTGCCATTGGAACAGCTGTGTCTAAGAATTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp GCAGGATCCAAACAGCGGAAGATAGACCCAAACAACATTAGTTTGCCAATTCTCCAGATAATCACTGTTTaGGAATGCAAATTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: AGSKQRKIDPNNISLPILQIITV*ECKFQL
Trigger: AAGCTGGAATTTGCATTCGCAAACAGTGATTATCTG...GAGAATTGGCAAACTAATGTTGTTTGGGTCTATCTTCCGCTGTTTGGATCCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp CTACTACCTAGCTTTTCCTACTTGCATTTTTGCTCCTGTCCTCTCAGTTCCTTATCTTTTGTACTTAGCTaGCATCCCTTATACGCTTGT +
Preference number: 4 (lower is better)
Translates to: LLPSFSYLHFCSCPLSSLSFVLS*HPLYAC
Trigger: ACAAGCGTATAAGGGATGGCAGCTAAGTACAAAAGA...TAAGGAACTGAGAGGACAGGAGCAAAAATGCAAGTAGGAAAAGCTAGGTAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442331.1
CDS-3UTR GCA 90 bp CTACTACCTAGCTTTTCCTACTTGCATTTTTGCTCCTGTCCTCTCAGTTCCTTAGCAGTAATTATAACTTaGACGCACGCCTTCTTTTGT +
Preference number: 4 (lower is better)
Translates to: LLPSFSYLHFCSCPLSSLAVIIT*THAFFC
Trigger: ACAAAAGAAGGCGTGCGTGCAAGTTATAATTACTGC...TAAGGAACTGAGAGGACAGGAGCAAAAATGCAAGTAGGAAAAGCTAGGTAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442331.1
CDS-3UTR GCA 90 bp ATGATGTTGGCTACCTTCTCAGGTGGTCCATTCAGAGAATCATCCAGAATAAACATGACAACCACCTGGTaGTTACGCAATAAGTTAAGA +
Preference number: 4 (lower is better)
Translates to: MMLATFSGGPFRESSRINMTTTW*LRNKLR
Trigger: TCTTAACTTATTGCGTAAGCACCAGGTGGTTGTCAT...GTTTATTCTGGATGATTCTCTGAATGGACCACCTGAGAAGGTAGCCAACATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp GCAGTCTCGGATGAATACTCGACTAGTTTTTATCTTCTCGTGGTACAACAGGTATTTACAAACACAGCCTaGTGCTCTTCACTGGATAAA +
Preference number: 4 (lower is better)
Translates to: AVSDEYSTSFYLLVVQQVFTNTA*CSSLDK
Trigger: TTTATCCAGTGAAGAGCAGCAGGCTGTGTTTGTAAA...TACCTGTTGTACCACGAGAAGATAAAAACTAGTCGAGTATTCATCCGAGACTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp GCAGGATCCAAACAGCGGAAGATAGACCCAAACAACATTAGTTTGCCAATTCTCAATCTTAGTTACTCCTaGAGGAGGTTTTACAAACAC +
Preference number: 4 (lower is better)
Translates to: AGSKQRKIDPNNISLPILNLSYS*RRFYKH
Trigger: GTGTTTGTAAAACCTCCTGCAGGAGTAACTAAGATT...GAGAATTGGCAAACTAATGTTGTTTGGGTCTATCTTCCGCTGTTTGGATCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp ATGATGTTGGCTACCTTCTCAGGTGGTCCATTCAGAGAATCATCCAGAATAAACTTTTTGCACTGCAAATaGGGAGACTGTAAATTCTGG +
Preference number: 4 (lower is better)
Translates to: MMLATFSGGPFRESSRINFLHCK*GDCKFW
Trigger: CCAGAATTTACAGTCTCCCCATTTGCAGTGCAAAAA...GTTTATTCTGGATGATTCTCTGAATGGACCACCTGAGAAGGTAGCCAACATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp GCAGGATCCAAACAGCGGAAGATAGACCCAAACAACATTAGTTTGCCAATTCTCTACTTTCTTTTGGCTTaGATTTGCGGAATCTACTTG +
Preference number: 4 (lower is better)
Translates to: AGSKQRKIDPNNISLPILYFLLA*ICGIYL
Trigger: CAAGTAGATTCCGCAAATCCAAGCCAAAAGAAAGTA...GAGAATTGGCAAACTAATGTTGTTTGGGTCTATCTTCCGCTGTTTGGATCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp TCTGGAGTTAATGCTCCTAAGTCTCGTAATCGTATTTTTGAGGCACGAAGAGAAGAGGTAGGTTCTCATTaGTGGAATAAAATGCCACGA +
Preference number: 4 (lower is better)
Translates to: SGVNAPKSRNRIFEARREEVGSH*WNKMPR
Trigger: TCGTGGCATTTTATTCCACCAATGAGAACCTACCTC...TTCTCTTCGTGCCTCAAAAATACGATTACGAGACTTAGGAGCATTAACTCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp GCAGGATCCAAACAGCGGAAGATAGACCCAAACAACATTAGTTTGCCAATTCTCTCACTATACTTGTGGTaGGTATTCGTTAGTAACTTG +
Preference number: 4 (lower is better)
Translates to: AGSKQRKIDPNNISLPILSLYLW*VFVSNL
Trigger: CAAGTTACTAACGAATACCCACCACAAGTATAGTGA...GAGAATTGGCAAACTAATGTTGTTTGGGTCTATCTTCCGCTGTTTGGATCCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp ATGATGTTGGCTACCTTCTCAGGTGGTCCATTCAGAGAATCATCCAGAATAAACCTTATGACAACCACCTaGTGCTTACGCAATAAGTTA +
Preference number: 4 (lower is better)
Translates to: MMLATFSGGPFRESSRINLMTTT*CLRNKL
Trigger: TAACTTATTGCGTAAGCACCAGGTGGTTGTCATAAG...GTTTATTCTGGATGATTCTCTGAATGGACCACCTGAGAAGGTAGCCAACATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp AATGCTTGGGTTTTTAATTTTATCCTGGAGAAGCTGATCAAGTTCGCAACGAAGGGGGCACTTCATGTTTaGATCTGCATTTTGATCCAA +
Preference number: 4 (lower is better)
Translates to: NAWVFNFILEKLIKFATKGALHV*ICILIQ
Trigger: TTGGATCAAAATGCAGATTCAAACATGAAGTGCCCC...CTTCGTTGCGAACTTGATCAGCTTCTCCAGGATAAAATTAAAAACCCAAGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp GCAGTCTCGGATGAATACTCGACTAGTTTTTATCTTCTCGTGGTACAACAGGTATTAAAATCTAACTGTTaGTCTGGCACTGCATCTTTG +
Preference number: 4 (lower is better)
Translates to: AVSDEYSTSFYLLVVQQVLKSNC*SGTASL
Trigger: CAAAGATGCAGTGCCAGATCAACAGTTAGATTTTAA...TACCTGTTGTACCACGAGAAGATAAAAACTAGTCGAGTATTCATCCGAGACTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp ACAAGAAGTTTTGTCTGCAGTAATTATAACTTGCACGCACGCCTTCTTTTGTACTTCACTGATGAAGGGTaGATGTGTACATATCCATCG +
Preference number: 4 (lower is better)
Translates to: TRSFVCSNYNLHARLLLYFTDEG*MCTYPS
Trigger: CGATGGATATGTACACATTCACCCTTCATCAGTGAA...GTACAAAAGAAGGCGTGCGTGCAAGTTATAATTACTGCAGACAAAACTTCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp GCAGTCTCGGATGAATACTCGACTAGTTTTTATCTTCTCGTGGTACAACAGGTACTTTTTATTGTGTGGTaGCAAGTTTCACAATTGTGC +
Preference number: 4 (lower is better)
Translates to: AVSDEYSTSFYLLVVQQVLFIVW*QVSQLC
Trigger: GCACAATTGTGAAACTTGTCACCACACAATAAAAAG...TACCTGTTGTACCACGAGAAGATAAAAACTAGTCGAGTATTCATCCGAGACTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp AATGCTTGGGTTTTTAATTTTATCCTGGAGAAGCTGATCAAGTTCGCAACGAAGTACCTGGAAAGTTTTTaGACTGCAAATGGGGAGACT +
Preference number: 4 (lower is better)
Translates to: NAWVFNFILEKLIKFATKYLESF*TANGET
Trigger: AGTCTCCCCATTTGCAGTGCAAAAACTTTCCAGGTA...CTTCGTTGCGAACTTGATCAGCTTCTCCAGGATAAAATTAAAAACCCAAGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp TTTCCATCCACAATCCACTCTAATAAGGCCTCTATTAATTCAAGATTCACCTTTTTCAGCAACAGAGATTaGAGAGATTCGTCGGGGTTG +
Preference number: 4 (lower is better)
Translates to: FPSTIHSNKASINSRFTFFSNRD*RDSSGL
Trigger: CAACCCCGACGAATCTCTGCAATCTCTGTTGCTGAA...AAAGGTGAATCTTGAATTAATAGAGGCCTTATTAGAGTGGATTGTGGATGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp CTCAGCAATGTTGGTGGAAATTATAATCTTAGTTACTCCTGCAGGAGGTTTTACAGGAAATGTACGACCTaGTATAGTAATAACGGGGCA +
Preference number: 4 (lower is better)
Translates to: LSNVGGNYNLSYSCRRFYRKCTT*YSNNGA
Trigger: TGCCCCGTTATTACTATACCAGGTCGTACATTTCCT...GTAAAACCTCCTGCAGGAGTAACTAAGATTATAATTTCCACCAACATTGCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp TTTCCATCCACAATCCACTCTAATAAGGCCTCTATTAATTCAAGATTCACCTTTATCCATCGTTCTTGGTaGCAAACTTCAACTCAGCTG +
Preference number: 4 (lower is better)
Translates to: FPSTIHSNKASINSRFTFIHRSW*QTSTQL
Trigger: CAGCTGAGTTGAAGTTTGTCACCAAGAACGATGGAT...AAAGGTGAATCTTGAATTAATAGAGGCCTTATTAGAGTGGATTGTGGATGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp GAGTGCTTTCCATCCACAATCCACTCTAATAAGGCCTCTATTAATTCAAGATTCTGTACTGACTTTGCCTaGCAGTCATATCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: ECFPSTIHSNKASINSRFCTDFA*QSYLLE
Trigger: TTCCAAAAGATATGACTGGCAGGCAAAGTCAGTACA...GAATCTTGAATTAATAGAGGCCTTATTAGAGTGGATTGTGGATGGAAAGCACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp ATTTTAATTCTTAGACACAGCTGTTCCAATGGCACTCTTTGTATTTCTGGTAGCAATAACTTGAAGACCTaGCCTCTGCGATACAATGTC +
Preference number: 4 (lower is better)
Translates to: ILILRHSCSNGTLCISGSNNLKT*PLRYNV
Trigger: GACATTGTATCGCAGAGGCCAGGTCTTCAAGTTATT...GCTACCAGAAATACAAAGAGTGCCATTGGAACAGCTGTGTCTAAGAATTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp AATGCTTGGGTTTTTAATTTTATCCTGGAGAAGCTGATCAAGTTCGCAACGAAGAGACAACATCATCGATaGTTATGGATGTCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: NAWVFNFILEKLIKFATKRQHHR*LWMSQQ
Trigger: TTGCTGAGACATCCATAACCATCGATGATGTTGTCT...CTTCGTTGCGAACTTGATCAGCTTCTCCAGGATAAAATTAAAAACCCAAGCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp AATGCTTGGGTTTTTAATTTTATCCTGGAGAAGCTGATCAAGTTCGCAACGAAGTATTCGTTAGTAACTTaGCTATTTCCGACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: NAWVFNFILEKLIKFATKYSLVT*LFPTLP
Trigger: AGGAAGAGTCGGAAATAGTCAAGTTACTAACGAATA...CTTCGTTGCGAACTTGATCAGCTTCTCCAGGATAAAATTAAAAACCCAAGCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp GAGTGCTTTCCATCCACAATCCACTCTAATAAGGCCTCTATTAATTCAAGATTCGTTCATAAAGCATTTTaGTTTCTGCTAGTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: ECFPSTIHSNKASINSRFVHKAF*FLLVLV
Trigger: TACCAGGACTAGCAGAAATCAAAATGCTTTATGAAC...GAATCTTGAATTAATAGAGGCCTTATTAGAGTGGATTGTGGATGGAAAGCACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR TCA 90 bp CTCAGCAATGTTGGTGGAAATTATAATCTTAGTTACTCCTGCAGGAGGTTTTACACAGACTGGAGATTATaGGCACTAAACATCTCTAAA +
Preference number: 4 (lower is better)
Translates to: LSNVGGNYNLSYSCRRFYTDWRL*ALNISK
Trigger: TTTAGAGATGTTTAGTGCTCATAATCTCCAGTCTGT...GTAAAACCTCCTGCAGGAGTAACTAAGATTATAATTTCCACCAACATTGCTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR GCA 90 bp GAGTGCTTTCCATCCACAATCCACTCTAATAAGGCCTCTATTAATTCAAGATTCTCATTCGGAACTGCTTaGAGATTTTACCATTTTCAG +
Preference number: 4 (lower is better)
Translates to: ECFPSTIHSNKASINSRFSFGTA*RFYHFQ
Trigger: CTGAAAATGGTAAAATCTGCAAGCAGTTCCGAATGA...GAATCTTGAATTAATAGAGGCCTTATTAGAGTGGATTGTGGATGGAAAGCACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp AATGCTTGGGTTTTTAATTTTATCCTGGAGAAGCTGATCAAGTTCGCAACGAAGTCCAACAATTTGATTTaGGGGCACTTCATGTTTGAA +
Preference number: 4 (lower is better)
Translates to: NAWVFNFILEKLIKFATKSNNLI*GHFMFE
Trigger: TTCAAACATGAAGTGCCCCCAAATCAAATTGTTGGA...CTTCGTTGCGAACTTGATCAGCTTCTCCAGGATAAAATTAAAAACCCAAGCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp TTTCCATCCACAATCCACTCTAATAAGGCCTCTATTAATTCAAGATTCACCTTTGGGTCACTATACTTGTaGTGGGTATTCGTTAGTAAC +
Preference number: 4 (lower is better)
Translates to: FPSTIHSNKASINSRFTFGSLYL*WVFVSN
Trigger: GTTACTAACGAATACCCACCACAAGTATAGTGACCC...AAAGGTGAATCTTGAATTAATAGAGGCCTTATTAGAGTGGATTGTGGATGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp CTCAGCAATGTTGGTGGAAATTATAATCTTAGTTACTCCTGCAGGAGGTTTTACTCATCAACAATGATATaGGAAACTCCTTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: LSNVGGNYNLSYSCRRFYSSTMI*ETPCRA
Trigger: AGCTCTACAAGGAGTTTCCCATATCATTGTTGATGA...GTAAAACCTCCTGCAGGAGTAACTAAGATTATAATTTCCACCAACATTGCTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp AATGCTTGGGTTTTTAATTTTATCCTGGAGAAGCTGATCAAGTTCGCAACGAAGTTTCCATCCCTTTGCTaGCATCATATCTCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: NAWVFNFILEKLIKFATKFPSLC*HHISFL
Trigger: AAGAAAAGAGATATGATGCCAGCAAAGGGATGGAAA...CTTCGTTGCGAACTTGATCAGCTTCTCCAGGATAAAATTAAAAACCCAAGCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CCA 90 bp TTTCCATCCACAATCCACTCTAATAAGGCCTCTATTAATTCAAGATTCACCTTTTTTGGTACTTTCTTTTaGCTTGGATTTGCGGAATCT +
Preference number: 4 (lower is better)
Translates to: FPSTIHSNKASINSRFTFFGTFF*LGFAES
Trigger: AGATTCCGCAAATCCAAGCCAAAAGAAAGTACCAAA...AAAGGTGAATCTTGAATTAATAGAGGCCTTATTAGAGTGGATTGTGGATGGAAA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS GCA 90 bp ACCTGGCTCGCAGAGTTGGGTCCCGAGCCGGCTGTCGGGAGGTGCTaGCCAAGGGTCAGAGGTCCAAACTGGACTTGGCCACCCTCACGA +
Preference number: 5 (lower is better)
Translates to: TWLAELGPEPAVGRC*PRVRGPNWTWPPSR
Trigger: TCGTGAGGGTGGCCAAGTCCAGTTTGGACCTCTGACCCTTGGGCAGCACCTCCCGACAGCCGGCTCGGGACCCAACTCTGCGAGCCAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000622155.4
CDS GCA 90 bp GTCTGGCTCGCAGAGTTGGGTCCCGAGCCGGCTGTCGGGAGGTGCTaGCCAAGGGTCAGAGGTCCAAACTGGACTTGGCCACCCTCACGA +
Preference number: 5 (lower is better)
Translates to: VWLAELGPEPAVGRC*PRVRGPNWTWPPSR
Trigger: TCGTGAGGGTGGCCAAGTCCAGTTTGGACCTCTGACCCTTGGGCAGCACCTCCCGACAGCCGGCTCGGGACCCAACTCTGCGAGCCAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619207.1
CDS CCA 90 bp GGTCAGAGGTCCAAACTGGACTTGGCCACCCTCACGATTCTCACTTaGAGCAGCCCTGCGGTGGCCCAGCTGCAGCGGCACAGTCCCGGC +
Preference number: 5 (lower is better)
Translates to: GQRSKLDLATLTILT*SSPAVAQLQRHSPG
Trigger: GCCGGGACTGTGCCGCTGCAGCTGGGCCACCGCAGGGCTGCTCCAAGTGAGAATCGTGAGGGTGGCCAAGTCCAGTTTGGACCTCTGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457308.6
ENST00000619207.1
CDS GCA 90 bp TTCACCTGGCTCGCAGAGTTGGGTCCCGAGCCGGCTGTCGGGAGGTaGTGCCCAAGGGTCAGAGGTCCAAACTGGACTTGGCCACCCTCA +
Preference number: 5 (lower is better)
Translates to: FTWLAELGPEPAVGR*CPRVRGPNWTWPPS
Trigger: TGAGGGTGGCCAAGTCCAGTTTGGACCTCTGACCCTTGGGCAGCACCTCCCGACAGCCGGCTCGGGACCCAACTCTGCGAGCCAGGTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000622155.4
CDS CCA 90 bp GCTGTCGGGAGGTGCTGCCCAAGGGTCAGAGGTCCAAACTGGACTTaGCCACCCTCACGATTCTCACTTGGAGCAGCCCTGCGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: AVGRCCPRVRGPNWT*PPSRFSLGAALRWP
Trigger: GGGCCACCGCAGGGCTGCTCCAAGTGAGAATCGTGAGGGTGGCCAAGTCCAGTTTGGACCTCTGACCCTTGGGCAGCACCTCCCGACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000457308.6
ENST00000619207.1
ENST00000622155.4
CDS CCA 90 bp GAGCCGGCTGTCGGGAGGTGCTGCCCAAGGGTCAGAGGTCCAAACTaGACTTGGCCACCCTCACGATTCTCACTTGGAGCAGCCCTGCGG +
Preference number: 5 (lower is better)
Translates to: EPAVGRCCPRVRGPN*TWPPSRFSLGAALR
Trigger: CCGCAGGGCTGCTCCAAGTGAGAATCGTGAGGGTGGCCAAGTCCAGTTTGGACCTCTGACCCTTGGGCAGCACCTCCCGACAGCCGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000457308.6
ENST00000619207.1
ENST00000622155.4
CDS-3UTR CAA 90 bp GGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCAACCTGGCTCGCAGAGTaGGGTCCCGAGCCGGCTGTC +
Preference number: 5 (lower is better)
Translates to: GIYTASAALGFMPWAPPPTWLAE*GPEPAV
Trigger: GACAGCCGGCTCGGGACCCAACTCTGCGAGCCAGGT...TGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp ATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCAGGGACTGCCTCAGCTGCCTaGGGCTTCATGCCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: IYTASAALGFMPWAPPPGTASAA*GFMPWA
Trigger: AGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGT...CCCTGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp TCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTACTGCCTCAGCTGCCTaGGGCTTCATGCCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: SSTRASPNRSLVRGRGSATASAA*GFMPWA
Trigger: AGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGT...AGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp ATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCAGGGTCCGTGAATTGTCGTTaGAGGCTGGCCATTTCCTGC +
Preference number: 5 (lower is better)
Translates to: IYTASAALGFMPWAPPPGSVNCR*RLAISC
Trigger: GCAGGAAATGGCCAGCCTCAAACGACAATTCACGGA...CCCTGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp AAGGGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACACGCACGCCTTCTTTaGTACTTAGCTGCCATCCCT +
Preference number: 5 (lower is better)
Translates to: KGIYTASAALGFMPWAPPHARLL*YLAAIP
Trigger: AGGGATGGCAGCTAAGTACAAAAGAAGGCGTGCGTG...TGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp ACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTCCTCACGATTCTCACTaGGAGCAGCCCTGCGGTGGC +
Preference number: 5 (lower is better)
Translates to: TRASPNRSLVRGRGSAVIPHDSH*EQPCGG
Trigger: GCCACCGCAGGGCTGCTCCAAGTGAGAATCGTGAGG...AATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp ACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTCTGGAGGCCTTTCTGTaGCCGCCACCTCCACCACCA +
Preference number: 5 (lower is better)
Translates to: TRASPNRSLVRGRGSAVILEAFL*PPPPPP
Trigger: TGGTGGTGGAGGTGGCGGCAACAGAAAGGCCTCCAG...AATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp GGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCACTTTGGGTTTCCATTTaGGGCGTGACTCTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: GIYTASAALGFMPWAPPPLWVSI*GVTLLC
Trigger: GCAAAGGAGAGTCACGCCCAAAATGGAAACCCAAAG...TGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp AAGGGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCATCCGTGAATTGTCGTTaGAGGCTGGCCATTTCCTGC +
Preference number: 5 (lower is better)
Translates to: KGIYTASAALGFMPWAPPSVNCR*RLAISC
Trigger: GCAGGAAATGGCCAGCCTCAAACGACAATTCACGGA...TGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp ATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCAGGGTTTAGGCTCTCACCCTaGACACTCCAAATTGTGCTG +
Preference number: 5 (lower is better)
Translates to: IYTASAALGFMPWAPPPGFRLSP*TLQIVL
Trigger: CAGCACAATTTGGAGTGTCAAGGGTGAGAGCCTAAA...CCCTGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp ATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCAGGGTCTCTCAGTCGAGCCTaGGCGACAGGAAAAGAAAAA +
Preference number: 5 (lower is better)
Translates to: IYTASAALGFMPWAPPPGSLSRA*ATGKEK
Trigger: TTTTTCTTTTCCTGTCGCCAAGGCTCGACTGAGAGA...CCCTGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp AAGGGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACTGGTGGCTGAGGACTaGACACTTTCTAACCGAATC +
Preference number: 5 (lower is better)
Translates to: KGIYTASAALGFMPWAPPLVAED*TLSNRI
Trigger: GATTCGGTTAGAAAGTGTCAAGTCCTCAGCCACCAG...TGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp ATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCAGGGCTCGTAATCGTATTTTaGAGGCACGAAGAGAATCGG +
Preference number: 5 (lower is better)
Translates to: IYTASAALGFMPWAPPPGLVIVF*RHEENR
Trigger: CCGATTCTCTTCGTGCCTCAAAAATACGATTACGAG...CCCTGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp GCCTTCTCAGCAGCACTCCCGTGGTGCAGTATAACAGTCTGGTGGCTGAGGACTAAGCTGCACATTCACTaGGCCTCCTCCAAACAAGAC +
Preference number: 5 (lower is better)
Translates to: AFSAALPWCSITVWWLRTKLHIH*ASSKQD
Trigger: GTCTTGTTTGGAGGAGGCCAAGTGAATGTGCAGCTT...AGTCCTCAGCCACCAGACTGTTATACTGCACCACGGGAGTGCTGCTGAGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS CCA 90 bp TTCCAAAGGATCCAAGTCGGGAACGAGGGAAGGTTCCTGTCCAGCTaGCCAGTACCGCTCATCGTTACAGCAATCAGGCTCATCATCTTC +
Preference number: 5 (lower is better)
Translates to: FQRIQVGNEGRFLSS*PVPLIVTAIRLIIF
Trigger: GAAGATGATGAGCCTGATTGCTGTAACGATGAGCGGTACTGGCCAGCTGGACAGGAACCTTCCCTCGTTCCCGACTTGGATCCTTTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000619207.1
ENST00000620517.4
ENST00000622155.4
CDS-3UTR CAA 90 bp CTCTCAGTTCCTTACTCAGGCCTAGAGTGGTTCGTGCTCTCAGTGGAACTCAGCCACGCACGCCTTCTTTaGTACTTAGCTGCCATCCCT +
Preference number: 5 (lower is better)
Translates to: LSVPYSGLEWFVLSVELSHARLL*YLAAIP
Trigger: AGGGATGGCAGCTAAGTACAAAAGAAGGCGTGCGTG...GCTGAGTTCCACTGAGAGCACGAACCACTCTAGGCCTGAGTAAGGAACTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442331.1
CDS-3UTR CAA 90 bp TCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTCATCCTCAGGACCGCTaGACAGCGTTCAGTATTGAA +
Preference number: 5 (lower is better)
Translates to: SSTRASPNRSLVRGRGSAHPQDR*TAFSIE
Trigger: TTCAATACTGAACGCTGTCAAGCGGTCCTGAGGATG...AGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp CCCTTGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCTGCCACGAGCGGAGCTaGGTAGGGATATTTGTGGTC +
Preference number: 5 (lower is better)
Translates to: PLTLQIVLGVAKALLEMACHERS*VGIFVV
Trigger: GACCACAAATATCCCTACCAAGCTCCGCTCGTGGCA...GGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTCTCGTAATCGTATTTTaGAGGCACGAAGAGAATCGG +
Preference number: 5 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGLVIVF*RHEENR
Trigger: CCGATTCTCTTCGTGCCTCAAAAATACGATTACGAG...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp TCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTAAGCAGCACACAGCATaGCTGATATCAGCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: SSTRASPNRSLVRGRGSAKQHTA*LISAWG
Trigger: ACCCCAAGCTGATATCAGCAATGCTGTGTGCTGCTT...AGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp GGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCATGCAGTAATTATAACTaGCACGCACGCCTTCTTTTG +
Preference number: 5 (lower is better)
Translates to: GIYTASAALGFMPWAPPPCSNYN*HARLLL
Trigger: CAAAAGAAGGCGTGCGTGCAAGTTATAATTACTGCA...TGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp CACCTGATGGGAAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACTCCAGCATCAGCATCTaGTTCTTGCAGGTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: HLMGSSYKTDPTIIQGDNSSISI*FLQVSE
Trigger: CTCCGAGACCTGCAAGAACAAGATGCTGATGCTGGA...GTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTTCCCATCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp ATCTGGTATCCCACGGTCAGACCCACCCTCTCTGCTCTTTCTTTAGCAACGCGTCATCCTCAGGACCGCTaGACAGCGTTCAGTATTGAA +
Preference number: 5 (lower is better)
Translates to: IWYPTVRPTLSALSLATRHPQDR*TAFSIE
Trigger: TTCAATACTGAACGCTGTCAAGCGGTCCTGAGGATG...ACGCGTTGCTAAAGAAAGAGCAGAGAGGGTGGGTCTGACCGTGGGATACCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp TCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTTCCAAGCTTATCTGGTaGACTGCCTCAGAGATCTTC +
Preference number: 5 (lower is better)
Translates to: SSTRASPNRSLVRGRGSASKLIW*TASEIF
Trigger: GAAGATCTCTGAGGCAGTCAACCAGATAAGCTTGGA...AGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp ACTTGGCCTCCTCCAAACAAGACCAGCGGGTACACAGACACCATGCTGCAGTCTTCCAAGCTTATCTGGTaGACTGCCTCAGAGATCTTC +
Preference number: 5 (lower is better)
Translates to: TWPPPNKTSGYTDTMLQSSKLIW*TASEIF
Trigger: GAAGATCTCTGAGGCAGTCAACCAGATAAGCTTGGA...AGACTGCAGCATGGTGTCTGTGTACCCGCTGGTCTTGTTTGGAGGAGGCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp CCCTTGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCAGAGATTCGTCGGGGTaGGGTACAGATGATGTTGGC +
Preference number: 5 (lower is better)
Translates to: PLTLQIVLGVAKALLEMARDSSG*GTDDVG
Trigger: GCCAACATCATCTGTACCCAACCCCGACGAATCTCT...GGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp GGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACCACCAAACAACATTAGTTaGCCAATTCTCACATCCACG +
Preference number: 5 (lower is better)
Translates to: GIYTASAALGFMPWAPPPPNNIS*PILTST
Trigger: CGTGGATGTGAGAATTGGCAAACTAATGTTGTTTGG...TGGTGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp AAGGGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCATCACCTGCACTACATTaGGATACAAAGCAGCACACA +
Preference number: 5 (lower is better)
Translates to: KGIYTASAALGFMPWAPPSPALH*DTKQHT
Trigger: TGTGTGCTGCTTTGTATCCAAATGTAGTGCAGGTGA...TGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp AAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACGAACTCTCCTCCACGCACGCCTTCTTTaGTACTTAGCTGCCATCCCT +
Preference number: 5 (lower is better)
Translates to: KQLQNGSNHHPGRQRTLLHARLL*YLAAIP
Trigger: AGGGATGGCAGCTAAGTACAAAAGAAGGCGTGCGTG...GAGGAGAGTTCGTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp CCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTTCCCAGGTGAGCAGGTCCAAACTGGACTaGGCCACCCTCACGATTCTC +
Preference number: 5 (lower is better)
Translates to: PNRSLVRGRGSAVISQVSRSKLD*ATLTIL
Trigger: GAGAATCGTGAGGGTGGCCAAGTCCAGTTTGGACCT...GCTCACCTGGGAAATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp CCCTTGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCATCAGCATCTTGTTCTaGCAGGTCTCGGAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: PLTLQIVLGVAKALLEMAISILF*QVSEKS
Trigger: GCTCTTCTCCGAGACCTGCAAGAACAAGATGCTGAT...GGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp TCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTATACCTGGAAAGTTTTaGCACTGCAAATGGGGAGAC +
Preference number: 5 (lower is better)
Translates to: SSTRASPNRSLVRGRGSAIPGKF*HCKWGD
Trigger: GTCTCCCCATTTGCAGTGCAAAAACTTTCCAGGTAT...AGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTATTTGCGGAATCTACTaGTCAGATACTCCAGTTCTA +
Preference number: 5 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGICGIY*SDTPVL
Trigger: TAGAACTGGAGTATCTGACAAGTAGATTCCGCAAAT...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp AAGGGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCATCTTTTGGCTTGGATTaGCGGAATCTACTTGTCAGA +
Preference number: 5 (lower is better)
Translates to: KGIYTASAALGFMPWAPPSFGLD*RNLLVR
Trigger: TCTGACAAGTAGATTCCGCAAATCCAAGCCAAAAGA...TGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp TCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTCAGCATGTACTGACTTaGCCTGCCAGTCATATCTTT +
Preference number: 5 (lower is better)
Translates to: SSTRASPNRSLVRGRGSAQHVLT*PASHIF
Trigger: AAAGATATGACTGGCAGGCAAAGTCAGTACATGCTG...AGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp CCCTTGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCTGGGTACAGATGATGTaGGCTACCTTCTCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: PLTLQIVLGVAKALLEMAWVQMM*ATFSGG
Trigger: ACCACCTGAGAAGGTAGCCAACATCATCTGTACCCA...GGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp CACCTGATGGGAAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACGTTCAGCAACAGAGATaGCAGAGATTCGTCGGGGTT +
Preference number: 5 (lower is better)
Translates to: HLMGSSYKTDPTIIQGDNVQQQR*QRFVGV
Trigger: AACCCCGACGAATCTCTGCAATCTCTGTTGCTGAAC...GTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTTCCCATCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp CTGGGCTCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTCCTGTAATACATACCTaGTCACAGCAATTGCATCTT +
Preference number: 5 (lower is better)
Translates to: LGSSTRASPNRSLVRGRGPVIHT*SQQLHL
Trigger: AAGATGCAATTGCTGTGACAAGGTATGTATTACAGG...ACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGAGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp AAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACGAACTCTCCTCTCCGTGAATTGTCGTTaGAGGCTGGCCATTTCCTGC +
Preference number: 5 (lower is better)
Translates to: KQLQNGSNHHPGRQRTLLSVNCR*RLAISC
Trigger: GCAGGAAATGGCCAGCCTCAAACGACAATTCACGGA...GAGGAGAGTTCGTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp TCCTCCACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTTCACCTGCACTACATTaGGATACAAAGCAGCACACA +
Preference number: 5 (lower is better)
Translates to: SSTRASPNRSLVRGRGSASPALH*DTKQHT
Trigger: TGTGTGCTGCTTTGTATCCAAATGTAGTGCAGGTGA...AGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp CAGACCCCAGATGCAACACGGCCTGCTCGGCCTTTCCTTTGTAGAGCATTAGCTTCACCTGCACTACATTaGGATACAAAGCAGCACACA +
Preference number: 5 (lower is better)
Translates to: QTPDATRPARPFLCRALASPALH*DTKQHT
Trigger: TGTGTGCTGCTTTGTATCCAAATGTAGTGCAGGTGA...AGCTAATGCTCTACAAAGGAAAGGCCGAGCAGGCCGTGTTGCATCTGGGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp CCCTTGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCAAGCTGCACATTCACTaGGCCTCCTCCAAACAAGAC +
Preference number: 5 (lower is better)
Translates to: PLTLQIVLGVAKALLEMAKLHIH*ASSKQD
Trigger: GTCTTGTTTGGAGGAGGCCAAGTGAATGTGCAGCTT...GGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp ACCAGGGCCAGCCCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTGGAGTGGCCAAGGCTTaGTTAGAAATGGCCCTAAGG +
Preference number: 5 (lower is better)
Translates to: TRASPNRSLVRGRGSAVIGVAKA*LEMALR
Trigger: CCTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCC...AATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGGGCTGGCCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp CTCTCAGTTCCTTACTCAGGCCTAGAGTGGTTCGTGCTCTCAGTGGAACTCAGCTTCCTACTTGCATTTTaGCTCCTGTCCTCTCAGTTC +
Preference number: 5 (lower is better)
Translates to: LSVPYSGLEWFVLSVELSFLLAF*LLSSQF
Trigger: GAACTGAGAGGACAGGAGCAAAAATGCAAGTAGGAA...GCTGAGTTCCACTGAGAGCACGAACCACTCTAGGCCTGAGTAAGGAACTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442331.1
CDS-3UTR CAA 90 bp GGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCATTGCTTATGTTACTGTaGCTAGGTCTGGAAGGGCGC +
Preference number: 5 (lower is better)
Translates to: GSGQGFVRNGPKGIYTASLLMLL*LGLEGR
Trigger: GCGCCCTTCCAGACCTAGCAACAGTAACATAAGCAA...TGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp AAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACGAACTCTCCTCCTTTGGGTTTCCATTTaGGGCGTGACTCTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: KQLQNGSNHHPGRQRTLLLWVSI*GVTLLC
Trigger: GCAAAGGAGAGTCACGCCCAAAATGGAAACCCAAAG...GAGGAGAGTTCGTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp CCCAATAGGTCTTTAGTTCGAGGTAGAGGTTCTGCTGTTATTTCCCAGGTGAGCTCCAGCATCAGCATCTaGTTCTTGCAGGTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: PNRSLVRGRGSAVISQVSSSISI*FLQVSE
Trigger: CTCCGAGACCTGCAAGAACAAGATGCTGATGCTGGA...GCTCACCTGGGAAATAACAGCAGAACCTCTACCTCGAACTAAAGACCTATTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp AAGGGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCATTTTGGTACTTTCTTTaGGCTTGGATTTGCGGAATC +
Preference number: 5 (lower is better)
Translates to: KGIYTASAALGFMPWAPPFWYFL*AWICGI
Trigger: GATTCCGCAAATCCAAGCCAAAAGAAAGTACCAAAA...TGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp AAGGGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCATATTCTTCCAACAATTaGATTTGGGGGCACTTCATG +
Preference number: 5 (lower is better)
Translates to: KGIYTASAALGFMPWAPPYSSNN*IWGHFM
Trigger: CATGAAGTGCCCCCAAATCAAATTGTTGGAAGAATA...TGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp CCCTTGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCTCTCAGCATTTGAGTTaGCCTCTTCTCCTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: PLTLQIVLGVAKALLEMASQHLS*PLLLWH
Trigger: ATGCCACAGGAGAAGAGGCAAACTCAAATGCTGAGA...GGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp GTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGAAGCAGCACACAGCATaGCTGATATCAGCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: VAKALLEMALRVYTLPQLKQHTA*LISAWG
Trigger: ACCCCAAGCTGATATCAGCAATGCTGTGTGCTGCTT...CAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp CCCTTGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCTTTAGGCTCTCACCCTaGACACTCCAAATTGTGCTG +
Preference number: 5 (lower is better)
Translates to: PLTLQIVLGVAKALLEMAFRLSP*TLQIVL
Trigger: CAGCACAATTTGGAGTGTCAAGGGTGAGAGCCTAAA...GGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS CCA 90 bp TTTCTCTTTCTTCCCAAGCAGGGAGTGATTGCCTCTCTTGCAGAATaGACTGGAACTGTCTGGAAGCCTGTTTCATTCGGAACTGCTTGC +
Preference number: 5 (lower is better)
Translates to: FLFLPKQGVIASLAE*TGTVWKPVSFGTAC
Trigger: GCAAGCAGTTCCGAATGAAACAGGCTTCCAGACAGTTCCAGTCCATTCTGCAAGAGAGGCAATCACTCCCTGCTTGGGAAGAAAGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000620517.4
ENST00000622155.4
CDS-3UTR CAA 90 bp GTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTCCTTTGCCTGGCTaGCCTTTTCTTCTTACTGAA +
Preference number: 5 (lower is better)
Translates to: VAKALLEMALRVYTLPQLPPLPG*PFLLTE
Trigger: TTCAGTAAGAAGAAAAGGCAAGCCAGGCAAAGGAGG...CAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp GTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGGGGCGTGACTCTCCTTaGCTTATGTTACTGTTGCTA +
Preference number: 5 (lower is better)
Translates to: VAKALLEMALRVYTLPQLGRDSP*LMLLLL
Trigger: TAGCAACAGTAACATAAGCAAAGGAGAGTCACGCCC...CAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp CACCTGATGGGAAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACATACCTGGAAAGTTTTaGCACTGCAAATGGGGAGAC +
Preference number: 5 (lower is better)
Translates to: HLMGSSYKTDPTIIQGDNIPGKF*HCKWGD
Trigger: GTCTCCCCATTTGCAGTGCAAAAACTTTCCAGGTAT...GTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTTCCCATCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp CAGACCCCAGATGCAACACGGCCTGCTCGGCCTTTCCTTTGTAGAGCATTAGCTGTACTTTCTTTTGGCTaGGATTTGCGGAATCTACTT +
Preference number: 5 (lower is better)
Translates to: QTPDATRPARPFLCRALAVLSFG*DLRNLL
Trigger: AAGTAGATTCCGCAAATCCAAGCCAAAAGAAAGTAC...AGCTAATGCTCTACAAAGGAAAGGCCGAGCAGGCCGTGTTGCATCTGGGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp GACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGAGGGTCACTATACTaGTGGTGGGTATTCGTTAGT +
Preference number: 5 (lower is better)
Translates to: DTPNCAGSGQGFVRNGPKGGSLY*WWVFVS
Trigger: ACTAACGAATACCCACCACAAGTATAGTGACCCTCC...CTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp ATCAAGTTCGCAACGAAGCTCCTTTACCAGTTCAGCCACCTGATGGGAAGCAGCCAGCATGTACTGACTTaGCCTGCCAGTCATATCTTT +
Preference number: 5 (lower is better)
Translates to: IKFATKLLYQFSHLMGSSQHVLT*PASHIF
Trigger: AAAGATATGACTGGCAGGCAAAGTCAGTACATGCTG...GCTGCTTCCCATCAGGTGGCTGAACTGGTAAAGGAGCTTCGTTGCGAACTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp AAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTTGGGTTCAGCAACAGAGATaGCAGAGATTCGTCGGGGTT +
Preference number: 5 (lower is better)
Translates to: KALLEMALRVYTLPQLPWVQQQR*QRFVGV
Trigger: AACCCCGACGAATCTCTGCAATCTCTGTTGCTGAAC...CCAAGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp AAGGGTATATACACTGCCTCAGCTGCCTTGGGCTTCATGCCCTGGGCTCCTCCACGATTACTACGTCTGTaGTTGAAAAGAGAATTAGAC +
Preference number: 5 (lower is better)
Translates to: KGIYTASAALGFMPWAPPRLLRL*LKRELD
Trigger: GTCTAATTCTCTTTTCAACAACAGACGTAGTAATCG...TGGAGGAGCCCAGGGCATGAAGCCCAAGGCAGCTGAGGCAGTGTATATACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp GTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGTCTCAGCATTTGAGTTaGCCTCTTCTCCTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: VAKALLEMALRVYTLPQLSQHLS*PLLLWH
Trigger: ATGCCACAGGAGAAGAGGCAAACTCAAATGCTGAGA...CAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp CCCTTGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCATTGCTGATATCAGCTaGGGGTTCTCAGCATTTGAG +
Preference number: 5 (lower is better)
Translates to: PLTLQIVLGVAKALLEMAIADIS*GFSAFE
Trigger: CTCAAATGCTGAGAACCCCAAGCTGATATCAGCAAT...GGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp AAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTTGGAAGCTGCACATTCACTaGGCCTCCTCCAAACAAGAC +
Preference number: 5 (lower is better)
Translates to: KALLEMALRVYTLPQLPWKLHIH*ASSKQD
Trigger: GTCTTGTTTGGAGGAGGCCAAGTGAATGTGCAGCTT...CCAAGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS GCA 90 bp AGAATGGTTTCTCTTTCTTCCCAAGCAGGGAGTGATTGCCTCTCTTaGAGAATGGACTGGAACTGTCTGGAAGCCTGTTTCATTCGGAAC +
Preference number: 5 (lower is better)
Translates to: RMVSLSSQAGSDCLS*RMDWNCLEACFIRN
Trigger: GTTCCGAATGAAACAGGCTTCCAGACAGTTCCAGTCCATTCTGCAAGAGAGGCAATCACTCCCTGCTTGGGAAGAAAGAGAAACCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000620517.4
ENST00000622155.4
CDS CCA 90 bp GCCTCAGAGATCTTCATCCTCTCTCCAAATGTCTCTGAAAAACACTaGGTAAGGAGATGCTCTAGTGATGCTCCCACATCTCCATCACAC +
Preference number: 5 (lower is better)
Translates to: ASEIFILSPNVSEKH*VRRCSSDAPTSPSH
Trigger: GTGTGATGGAGATGTGGGAGCATCACTAGAGCATCTCCTTACCCAGTGTTTTTCAGAGACATTTGGAGAGAGGATGAAGATCTCTGAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000620517.4
ENST00000622155.4
CDS-3UTR CAA 90 bp TCCTTACTCAGGCCTAGAGTGGTTCGTGCTCTCAGTGGAACTCAGCAGAATGTTCCTAGCTTTTCCTACTaGCATTTTTGCTCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: SLLRPRVVRALSGTQQNVPSFSY*HFCSCP
Trigger: AGGACAGGAGCAAAAATGCAAGTAGGAAAAGCTAGG...AACATTCTGCTGAGTTCCACTGAGAGCACGAACCACTCTAGGCCTGAGTAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442331.1
CDS-3UTR CAA 90 bp ACTTGGCCTCCTCCAAACAAGACCAGCGGGTACACAGACACCATGCTGCAGTCTTTCATTCGGAACTGCTaGCAGATTTTACCATTTTCA +
Preference number: 5 (lower is better)
Translates to: TWPPPNKTSGYTDTMLQSFIRNC*QILPFS
Trigger: TGAAAATGGTAAAATCTGCAAGCAGTTCCGAATGAA...AGACTGCAGCATGGTGTCTGTGTACCCGCTGGTCTTGTTTGGAGGAGGCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp GTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGATTGCTGATATCAGCTaGGGGTTCTCAGCATTTGAG +
Preference number: 5 (lower is better)
Translates to: VAKALLEMALRVYTLPQLIADIS*GFSAFE
Trigger: CTCAAATGCTGAGAACCCCAAGCTGATATCAGCAAT...CAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp AAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTTGGTCTCTCAGTCGAGCCTaGGCGACAGGAAAAGAAAAA +
Preference number: 5 (lower is better)
Translates to: KALLEMALRVYTLPQLPWSLSRA*ATGKEK
Trigger: TTTTTCTTTTCCTGTCGCCAAGGCTCGACTGAGAGA...CCAAGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS TCA 90 bp TCTAGTGATGCTCCCACATCTCCATCACACATCCTCAGGACCGCTTaGCAGCGTTCAGTATTGAAACCATACCTGGAAAGTTTTTGCACT +
Preference number: 5 (lower is better)
Translates to: SSDAPTSPSHILRTA*QRSVLKPYLESFCT
Trigger: AGTGCAAAAACTTTCCAGGTATGGTTTCAATACTGAACGCTGTCAAGCGGTCCTGAGGATGTGTGATGGAGATGTGGGAGCATCACTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000620517.4
ENST00000622155.4
CDS TCA 90 bp CCTCTTCCTGTCGCTGTTCCATACACTCATCCAAGCTTATCTGGTTaGCTGCCTCAGAGATCTTCATCCTCTCTCCAAATGTCTCTGAAA +
Preference number: 5 (lower is better)
Translates to: PLPVAVPYTHPSLSG*LPQRSSSSLQMSLK
Trigger: TTTCAGAGACATTTGGAGAGAGGATGAAGATCTCTGAGGCAGTCAACCAGATAAGCTTGGATGAGTGTATGGAACAGCGACAGGAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000620517.4
ENST00000622155.4
CDS GCA 90 bp AGAATGGTTTCTCTTTCTTCCCAAGCAGGGAGTGATTGCCTCTCTTaGAGAATGGACTGGAACTGTCTGGAAGCCCGGCTTTTTGTATTT +
Preference number: 5 (lower is better)
Translates to: RMVSLSSQAGSDCLS*RMDWNCLEARLFVF
Trigger: AAATACAAAAAGCCGGGCTTCCAGACAGTTCCAGTCCATTCTGCAAGAGAGGCAATCACTCCCTGCTTGGGAAGAAAGAGAAACCATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492042.1
CDS CCA 90 bp AATGCCTCTTCCTGTCGCTGTTCCATACACTCATCCAAGCTTATCTaGTTGACTGCCTCAGAGATCTTCATCCTCTCTCCAAATGTCTCT +
Preference number: 5 (lower is better)
Translates to: NASSCRCSIHSSKLI*LTASEIFILSPNVS
Trigger: AGAGACATTTGGAGAGAGGATGAAGATCTCTGAGGCAGTCAACCAGATAAGCTTGGATGAGTGTATGGAACAGCGACAGGAAGAGGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000620517.4
ENST00000622155.4
CDS CCA 90 bp GGAAATAAGCAGAGCATACAAACCTTGACACTTTCTAACCGAATCTaGTATCCCACGGTCAGACCCACCCTCTCTGCTCTTTCTTTAGCA +
Preference number: 5 (lower is better)
Translates to: GNKQSIQTLTLSNRI*YPTVRPTLSALSLA
Trigger: TGCTAAAGAAAGAGCAGAGAGGGTGGGTCTGACCGTGGGATACCAGATTCGGTTAGAAAGTGTCAAGGTTTGTATGCTCTGCTTATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474104.5
ENST00000622155.4
CDS-3UTR CAA 90 bp TGCGGCACTGTCTACTACCTAGCTTTTCCTACTTGCATTTTTGCTCCTGTCCTCTCCTTCATTATGGTCTaGCTGGCTCATCTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: CGTVYYLAFPTCIFAPVLSFIMV*LAHLFS
Trigger: GGAAAAGAGATGAGCCAGCAAGACCATAATGAAGGA...GAGGACAGGAGCAAAAATGCAAGTAGGAAAAGCTAGGTAGTAGACAGTGCCGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442331.1
CDS-3UTR CAA 90 bp AAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACGAACTCTCCTCTCTTTTGGCTTGGATTaGCGGAATCTACTTGTCAGA +
Preference number: 5 (lower is better)
Translates to: KQLQNGSNHHPGRQRTLLSFGLD*RNLLVR
Trigger: TCTGACAAGTAGATTCCGCAAATCCAAGCCAAAAGA...GAGGAGAGTTCGTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp CCCTTGACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCGTACTTTCTTTTGGCTaGGATTTGCGGAATCTACTT +
Preference number: 5 (lower is better)
Translates to: PLTLQIVLGVAKALLEMAVLSFG*DLRNLL
Trigger: AAGTAGATTCCGCAAATCCAAGCCAAAAGAAAGTAC...GGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTCAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp ATGATGTTGGCTACCTTCTCAGGTGGTCCATTCAGAGAATCATCCAGAATAAACAGAGATTCGTCGGGGTaGGGTACAGATGATGTTGGC +
Preference number: 5 (lower is better)
Translates to: MMLATFSGGPFRESSRINRDSSG*GTDDVG
Trigger: GCCAACATCATCTGTACCCAACCCCGACGAATCTCT...GTTTATTCTGGATGATTCTCTGAATGGACCACCTGAGAAGGTAGCCAACATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp GACACTCCAAATTGTGCTGGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGCCAAACAACATTAGTTaGCCAATTCTCACATCCACG +
Preference number: 5 (lower is better)
Translates to: DTPNCAGSGQGFVRNGPKPNNIS*PILTST
Trigger: CGTGGATGTGAGAATTGGCAAACTAATGTTGTTTGG...CTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCCAGCACAATTTGGAGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS CCA 90 bp CTAGAGGGTACTGGCAGAAAGTTCACAGGAGGGTCACTATACTTGTaGTGGGTATTCGTTAGTAACTTGACTATTTCCGACTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: LEGTGRKFTGGSLYL*WVFVSNLTISDSSS
Trigger: AGAGGAAGAGTCGGAAATAGTCAAGTTACTAACGAATACCCACCACAAGTATAGTGACCCTCCTGTGAACTTTCTGCCAGTACCCTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000620517.4
ENST00000622155.4
CDS-3UTR CAA 90 bp GCAGGATCCAAACAGCGGAAGATAGACCCAAACAACATTAGTTTGCCAATTCTCGGGCGTGACTCTCCTTaGCTTATGTTACTGTTGCTA +
Preference number: 5 (lower is better)
Translates to: AGSKQRKIDPNNISLPILGRDSP*LMLLLL
Trigger: TAGCAACAGTAACATAAGCAAAGGAGAGTCACGCCC...GAGAATTGGCAAACTAATGTTGTTTGGGTCTATCTTCCGCTGTTTGGATCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp AAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACGAACTCTCCTCATTTGCGGAATCTACTaGTCAGATACTCCAGTTCTA +
Preference number: 5 (lower is better)
Translates to: KQLQNGSNHHPGRQRTLLICGIY*SDTPVL
Trigger: TAGAACTGGAGTATCTGACAAGTAGATTCCGCAAAT...GAGGAGAGTTCGTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp AAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACGAACTCTCCTCTTTTGGTACTTTCTTTaGGCTTGGATTTGCGGAATC +
Preference number: 5 (lower is better)
Translates to: KQLQNGSNHHPGRQRTLLFWYFL*AWICGI
Trigger: GATTCCGCAAATCCAAGCCAAAAGAAAGTACCAAAA...GAGGAGAGTTCGTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp GGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGTATTCGTTAGTAACTaGACTATTTCCGACTCTTCC +
Preference number: 5 (lower is better)
Translates to: GSGQGFVRNGPKGIYTASVFVSN*TISDSS
Trigger: GGAAGAGTCGGAAATAGTCAAGTTACTAACGAATAC...TGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp AAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACGAACTCTCCTCGTATTCGTTAGTAACTaGACTATTTCCGACTCTTCC +
Preference number: 5 (lower is better)
Translates to: KQLQNGSNHHPGRQRTLLVFVSN*TISDSS
Trigger: GGAAGAGTCGGAAATAGTCAAGTTACTAACGAATAC...GAGGAGAGTTCGTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp GGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCACCTGTAATACATACCTaGTCACAGCAATTGCATCTT +
Preference number: 5 (lower is better)
Translates to: GSGQGFVRNGPKGIYTASPVIHT*SQQLHL
Trigger: AAGATGCAATTGCTGTGACAAGGTATGTATTACAGG...TGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp GGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAATGATGGACATTGTTTaGATGACTGACTTGCTAACC +
Preference number: 5 (lower is better)
Translates to: GSGQGFVRNGPKGIYTASMMDIV*MTDLLT
Trigger: GGTTAGCAAGTCAGTCATCAAAACAATGTCCATCAT...TGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp AAGCAGCTACAAAACGGATCCAACCATCATCCAGGGAGACAACGAACTCTCCTCACATATCCATCGTTCTaGGTGACAAACTTCAACTCA +
Preference number: 5 (lower is better)
Translates to: KQLQNGSNHHPGRQRTLLTYPSF*VTNFNS
Trigger: TGAGTTGAAGTTTGTCACCAAGAACGATGGATATGT...GAGGAGAGTTCGTTGTCTCCCTGGATGATGGTTGGATCCGTTTTGTAGCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp ATCAAGTTCGCAACGAAGCTCCTTTACCAGTTCAGCCACCTGATGGGAAGCAGCACTGTTGCTAGGTCATaGTGTTATAATTGCTTAGAG +
Preference number: 5 (lower is better)
Translates to: IKFATKLLYQFSHLMGSSTVARS*CYNCLE
Trigger: CTCTAAGCAATTATAACACAATGACCTAGCAACAGT...GCTGCTTCCCATCAGGTGGCTGAACTGGTAAAGGAGCTTCGTTGCGAACTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS TCA 90 bp ACCATAAATTTCTGTTACCAGGAAATAAGCAGAGCATACAAACCTTaGCACTTTCTAACCGAATCTGGTATCCCACGGTCAGACCCACCC +
Preference number: 5 (lower is better)
Translates to: TINFCYQEISRAYKP*HFLTESGIPRSDPP
Trigger: GGGTGGGTCTGACCGTGGGATACCAGATTCGGTTAGAAAGTGTCAAGGTTTGTATGCTCTGCTTATTTCCTGGTAACAGAAATTTATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474104.5
ENST00000622155.4
CDS TCA 90 bp GTCTTGTTATGTTGCCCTGGATGGTCTTGCACTCCTGGCCTTGAGTaGTCCTTTGTTGGATTTGTTGGGATTGGATGTAGAAGACTTTAT +
Preference number: 5 (lower is better)
Translates to: VLLCCPGWSCTPGLE*SFVGFVGIGCRRLY
Trigger: ATAAAGTCTTCTACATCCAATCCCAACAAATCCAACAAAGGATCACTCAAGGCCAGGAGTGCAAGACCATCCAGGGCAACATAACAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479345.2
ENST00000492042.1
CDS CCA 90 bp ACTCAGAAATATGTAAACGACAAGCCAGAGGTAGGTTCTCATTGGTaGAATAAAATGCCACGAGCGGAGCTTGGTAGGGATATTTGTGGT +
Preference number: 5 (lower is better)
Translates to: TQKYVNDKPEVGSHW*NKMPRAELGRDICG
Trigger: ACCACAAATATCCCTACCAAGCTCCGCTCGTGGCATTTTATTCCACCAATGAGAACCTACCTCTGGCTTGTCGTTTACATATTTCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000620517.4
ENST00000622155.4
CDS CCA 90 bp GAGGGTACTGGCAGAAAGTTCACAGGAGGGTCACTATACTTGTGGTaGGTATTCGTTAGTAACTTGACTATTTCCGACTCTTCCTCTAAA +
Preference number: 5 (lower is better)
Translates to: EGTGRKFTGGSLYLW*VFVSNLTISDSSSK
Trigger: TTTAGAGGAAGAGTCGGAAATAGTCAAGTTACTAACGAATACCCACCACAAGTATAGTGACCCTCCTGTGAACTTTCTGCCAGTACCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000620517.4
ENST00000622155.4
CDS-3UTR CAA 90 bp GGCACTGTCTACTACCTAGCTTTTCCTACTTGCATTTTTGCTCCTGTCCTCTCATGCAGTAATTATAACTaGCACGCACGCCTTCTTTTG +
Preference number: 5 (lower is better)
Translates to: GTVYYLAFPTCIFAPVLSCSNYN*HARLLL
Trigger: CAAAAGAAGGCGTGCGTGCAAGTTATAATTACTGCA...TGAGAGGACAGGAGCAAAAATGCAAGTAGGAAAAGCTAGGTAGTAGACAGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442331.1
CDS-3UTR CAA 90 bp TCTGGAGTTAATGCTCCTAAGTCTCGTAATCGTATTTTTGAGGCACGAAGAGAAATCAGCATCTTGTTCTaGCAGGTCTCGGAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: SGVNAPKSRNRIFEARREISILF*QVSEKS
Trigger: GCTCTTCTCCGAGACCTGCAAGAACAAGATGCTGAT...TTCTCTTCGTGCCTCAAAAATACGATTACGAGACTTAGGAGCATTAACTCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp ATTTTAATTCTTAGACACAGCTGTTCCAATGGCACTCTTTGTATTTCTGGTAGCTGCCACGAGCGGAGCTaGGTAGGGATATTTGTGGTC +
Preference number: 5 (lower is better)
Translates to: ILILRHSCSNGTLCISGSCHERS*VGIFVV
Trigger: GACCACAAATATCCCTACCAAGCTCCGCTCGTGGCA...GCTACCAGAAATACAAAGAGTGCCATTGGAACAGCTGTGTCTAAGAATTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp AAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTTGGATGATGGACATTGTTTaGATGACTGACTTGCTAACC +
Preference number: 5 (lower is better)
Translates to: KALLEMALRVYTLPQLPWMMDIV*MTDLLT
Trigger: GGTTAGCAAGTCAGTCATCAAAACAATGTCCATCAT...CCAAGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp GGGAGTGGCCAAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCACGATTACTACGTCTGTaGTTGAAAAGAGAATTAGAC +
Preference number: 5 (lower is better)
Translates to: GSGQGFVRNGPKGIYTASRLLRL*LKRELD
Trigger: GTCTAATTCTCTTTTCAACAACAGACGTAGTAATCG...TGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTTGGCCACTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452978.5
ENST00000457308.6
CDS-3UTR CAA 90 bp AAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTTGGACATATCCATCGTTCTaGGTGACAAACTTCAACTCA +
Preference number: 5 (lower is better)
Translates to: KALLEMALRVYTLPQLPWTYPSF*VTNFNS
Trigger: TGAGTTGAAGTTTGTCACCAAGAACGATGGATATGT...CCAAGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS TCA 90 bp CCTACCCCAGGACGACCTGTAAACATTAAGTATACTCCACCATTCTaGCCTGATAGTTCACTGATGAAGGGTGAATGTGTACATATCCAT +
Preference number: 5 (lower is better)
Translates to: PTPGRPVNIKYTPPF*PDSSLMKGECVHIH
Trigger: ATGGATATGTACACATTCACCCTTCATCAGTGAACTATCAGGTCAGAATGGTGGAGTATACTTAATGTTTACAGGTCGTCCTGGGGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497514.2
CDS GCA 90 bp GTGGTTTTCCCACATCCAGTCATACCACTTATGACAACCACCTGGTaGTTACGCAATAAGTTAAGAATGGTTTCTCTTTCTTCCCAAGCA +
Preference number: 5 (lower is better)
Translates to: VVFPHPVIPLMTTTW*LRNKLRMVSLSSQA
Trigger: TGCTTGGGAAGAAAGAGAAACCATTCTTAACTTATTGCGTAAGCACCAGGTGGTTGTCATAAGTGGTATGACTGGATGTGGGAAAACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000622155.4
CDS CCA 90 bp TCTCTTGATTCTCAGAAGTCATATGTAGAGTCTGAAGGGGTACTTTaGCTTTGGGTTTCCATTTTGGGCGTGACTCTCCTTTGCTTATGT +
Preference number: 5 (lower is better)
Translates to: SLDSQKSYVESEGVL*LWVSILGVTLLCLC
Trigger: ACATAAGCAAAGGAGAGTCACGCCCAAAATGGAAACCCAAAGCCAAAGTACCCCTTCAGACTCTACATATGACTTCTGAGAATCAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000619207.1
ENST00000620517.4
ENST00000622155.4
CDS CCA 90 bp TGTTTTATGACAGGCAGGATTATTTATTCTGGTCCTAGAGGGTACTaGCAGAAAGTTCACAGGAGGGTCACTATACTTGTGGTGGGTATT +
Preference number: 5 (lower is better)
Translates to: CFMTGRIIYSGPRGY*QKVHRRVTILVVGI
Trigger: AATACCCACCACAAGTATAGTGACCCTCCTGTGAACTTTCTGCCAGTACCCTCTAGGACCAGAATAAATAATCCTGCCTGTCATAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000620517.4
ENST00000622155.4
CDS-3UTR CAA 90 bp AAGGCTTTGTTAGAAATGGCCCTAAGGGTATATACACTGCCTCAGCTGCCTTGGTTCATTCGGAACTGCTaGCAGATTTTACCATTTTCA +
Preference number: 5 (lower is better)
Translates to: KALLEMALRVYTLPQLPWFIRNC*QILPFS
Trigger: TGAAAATGGTAAAATCTGCAAGCAGTTCCGAATGAA...CCAAGGCAGCTGAGGCAGTGTATATACCCTTAGGGCCATTTCTAACAAAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457308.6
CDS-3UTR CAA 90 bp ATGATGTTGGCTACCTTCTCAGGTGGTCCATTCAGAGAATCATCCAGAATAAACCTCGTAATCGTATTTTaGAGGCACGAAGAGAATCGG +
Preference number: 5 (lower is better)
Translates to: MMLATFSGGPFRESSRINLVIVF*RHEENR
Trigger: CCGATTCTCTTCGTGCCTCAAAAATACGATTACGAG...GTTTATTCTGGATGATTCTCTGAATGGACCACCTGAGAAGGTAGCCAACATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp TCTGGAGTTAATGCTCCTAAGTCTCGTAATCGTATTTTTGAGGCACGAAGAGAATCTCAGCATTTGAGTTaGCCTCTTCTCCTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: SGVNAPKSRNRIFEARRESQHLS*PLLLWH
Trigger: ATGCCACAGGAGAAGAGGCAAACTCAAATGCTGAGA...TTCTCTTCGTGCCTCAAAAATACGATTACGAGACTTAGGAGCATTAACTCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp ACAAGAAGTTTTGTCTGCAGTAATTATAACTTGCACGCACGCCTTCTTTTGTACAAGCAGCACACAGCATaGCTGATATCAGCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: TRSFVCSNYNLHARLLLYKQHTA*LISAWG
Trigger: ACCCCAAGCTGATATCAGCAATGCTGTGTGCTGCTT...GTACAAAAGAAGGCGTGCGTGCAAGTTATAATTACTGCAGACAAAACTTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS GCA 90 bp TCCAGTCTGTTTATTCTTATTCAATCTTCCCTCAGTCAGTGGTATTaGTGGGGACAGCAAGTGATAGAACATGGTGTGGCTGAATTTAAG +
Preference number: 5 (lower is better)
Translates to: SSLFILIQSSLSQWY*WGQQVIEHGVAEFK
Trigger: CTTAAATTCAGCCACACCATGTTCTATCACTTGCTGTCCCCAGCAATACCACTGACTGAGGGAAGATTGAATAAGAATAAACAGACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497514.2
CDS-3UTR CAA 90 bp GAGTGCTTTCCATCCACAATCCACTCTAATAAGGCCTCTATTAATTCAAGATTCGGAGGGTCACTATACTaGTGGTGGGTATTCGTTAGT +
Preference number: 5 (lower is better)
Translates to: ECFPSTIHSNKASINSRFGGSLY*WWVFVS
Trigger: ACTAACGAATACCCACCACAAGTATAGTGACCCTCC...GAATCTTGAATTAATAGAGGCCTTATTAGAGTGGATTGTGGATGGAAAGCACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp GCAGGATCCAAACAGCGGAAGATAGACCCAAACAACATTAGTTTGCCAATTCTCATGATGGACATTGTTTaGATGACTGACTTGCTAACC +
Preference number: 5 (lower is better)
Translates to: AGSKQRKIDPNNISLPILMMDIV*MTDLLT
Trigger: GGTTAGCAAGTCAGTCATCAAAACAATGTCCATCAT...GAGAATTGGCAAACTAATGTTGTTTGGGTCTATCTTCCGCTGTTTGGATCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp GCAGTCTCGGATGAATACTCGACTAGTTTTTATCTTCTCGTGGTACAACAGGTACCAAACAACATTAGTTaGCCAATTCTCACATCCACG +
Preference number: 5 (lower is better)
Translates to: AVSDEYSTSFYLLVVQQVPNNIS*PILTST
Trigger: CGTGGATGTGAGAATTGGCAAACTAATGTTGTTTGG...TACCTGTTGTACCACGAGAAGATAAAAACTAGTCGAGTATTCATCCGAGACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS CCA 90 bp AGTCTGTTTATTCTTATTCAATCTTCCCTCAGTCAGTGGTATTGCTaGGGACAGCAAGTGATAGAACATGGTGTGGCTGAATTTAAGGAA +
Preference number: 5 (lower is better)
Translates to: SLFILIQSSLSQWYC*GQQVIEHGVAEFKE
Trigger: TTCCTTAAATTCAGCCACACCATGTTCTATCACTTGCTGTCCCCAGCAATACCACTGACTGAGGGAAGATTGAATAAGAATAAACAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497514.2
CDS-3UTR CAA 90 bp TTTCCATCCACAATCCACTCTAATAAGGCCTCTATTAATTCAAGATTCACCTTTCTGGTGGCTGAGGACTaGACACTTTCTAACCGAATC +
Preference number: 5 (lower is better)
Translates to: FPSTIHSNKASINSRFTFLVAED*TLSNRI
Trigger: GATTCGGTTAGAAAGTGTCAAGTCCTCAGCCACCAG...AAAGGTGAATCTTGAATTAATAGAGGCCTTATTAGAGTGGATTGTGGATGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp ACAAGAAGTTTTGTCTGCAGTAATTATAACTTGCACGCACGCCTTCTTTTGTACATTGCTGATATCAGCTaGGGGTTCTCAGCATTTGAG +
Preference number: 5 (lower is better)
Translates to: TRSFVCSNYNLHARLLLYIADIS*GFSAFE
Trigger: CTCAAATGCTGAGAACCCCAAGCTGATATCAGCAAT...GTACAAAAGAAGGCGTGCGTGCAAGTTATAATTACTGCAGACAAAACTTCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS TCA 90 bp CTTTGTTTTACCTTTCTTCTGTCCTCTCATGAACTTCATCAACAATaGTATGGGAAACTCCTTGTAGAGCTGTATCTCCTTCTAGCCTTC +
Preference number: 5 (lower is better)
Translates to: LCFTFLLSSHELHQQ*YGKLLVELYLLLAF
Trigger: GAAGGCTAGAAGGAGATACAGCTCTACAAGGAGTTTCCCATATCATTGTTGATGAAGTTCATGAGAGGACAGAAGAAAGGTAAAACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474104.5
CDS GCA 90 bp CATCTGAATAAACCGAAAGATTTTCTGGGTGAAATAAAGCCCTCTTaGTTAGCACATATCCAGTTCTTCCCAACAAGAGTCTCTATACCA +
Preference number: 5 (lower is better)
Translates to: HLNKPKDFLGEIKPS*LAHIQFFPTRVSIP
Trigger: TGGTATAGAGACTCTTGTTGGGAAGAACTGGATATGTGCTAAGCAAGAGGGCTTTATTTCACCCAGAAAATCTTTCGGTTTATTCAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479345.2
ENST00000492042.1
CDS-3UTR CAA 90 bp GCAGTCTCGGATGAATACTCGACTAGTTTTTATCTTCTCGTGGTACAACAGGTACGATTACTACGTCTGTaGTTGAAAAGAGAATTAGAC +
Preference number: 5 (lower is better)
Translates to: AVSDEYSTSFYLLVVQQVRLLRL*LKRELD
Trigger: GTCTAATTCTCTTTTCAACAACAGACGTAGTAATCG...TACCTGTTGTACCACGAGAAGATAAAAACTAGTCGAGTATTCATCCGAGACTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS TCA 90 bp TCACAGGAGGGTCACTATACTTGTGGTGGGTATTCGTTAGTAACTTaGCTATTTCCGACTCTTCCTCTAAAAGGGTTATCAAAGAATATA +
Preference number: 5 (lower is better)
Translates to: SQEGHYTCGGYSLVT*LFPTLPLKGLSKNI
Trigger: TATATTCTTTGATAACCCTTTTAGAGGAAGAGTCGGAAATAGTCAAGTTACTAACGAATACCCACCACAAGTATAGTGACCCTCCTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000620517.4
ENST00000622155.4
CDS-3UTR CAA 90 bp GAGTGCTTTCCATCCACAATCCACTCTAATAAGGCCTCTATTAATTCAAGATTCTATTCTTCCAACAATTaGATTTGGGGGCACTTCATG +
Preference number: 5 (lower is better)
Translates to: ECFPSTIHSNKASINSRFYSSNN*IWGHFM
Trigger: CATGAAGTGCCCCCAAATCAAATTGTTGGAAGAATA...GAATCTTGAATTAATAGAGGCCTTATTAGAGTGGATTGTGGATGGAAAGCACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS-3UTR CAA 90 bp AATGCTTGGGTTTTTAATTTTATCCTGGAGAAGCTGATCAAGTTCGCAACGAAGCCTGTAATACATACCTaGTCACAGCAATTGCATCTT +
Preference number: 5 (lower is better)
Translates to: NAWVFNFILEKLIKFATKPVIHT*SQQLHL
Trigger: AAGATGCAATTGCTGTGACAAGGTATGTATTACAGG...CTTCGTTGCGAACTTGATCAGCTTCTCCAGGATAAAATTAAAAACCCAAGCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620517.4
CDS GCA 72 bp CTTGGCCACCCTCACGATTCTCACTTGGAGCAGCCCTaGGGTGGCCCAGCTGCAGCGGCACAGTCCCGGCGC +
Preference number: 6 (lower is better)
Translates to: LGHPHDSHLEQP*GGPAAAAQSRR
Trigger: GCGCCGGGACTGTGCCGCTGCAGCTGGGCCACCGCAGGGCTGCTCCAAGTGAGAATCGTGAGGGTGGCCAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457308.6
ENST00000619207.1
CDS CCA 72 bp CCACCCTCACGATTCTCACTTGGAGCAGCCCTGCGGTaGCCCAGCTGCAGCGGCACAGTCCCGGCGCCTTCT +
Preference number: 6 (lower is better)
Translates to: PPSRFSLGAALR*PSCSGTVPAPS
Trigger: AGAAGGCGCCGGGACTGTGCCGCTGCAGCTGGGCCACCGCAGGGCTGCTCCAAGTGAGAATCGTGAGGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457308.6
ENST00000619207.1
CDS CAA 90 bp GGGTCAGAGGTCCAAACTGGACTTGGCCACCCTCACGATTCTCACTaGGAGCAGCCCTGCGGTGGCCCAGCTGCAGCGGCACAGTCCCGG +
Preference number: 6 (lower is better)
Translates to: GSEVQTGLGHPHDSH*EQPCGGPAAAAQSR
Trigger: CCGGGACTGTGCCGCTGCAGCTGGGCCACCGCAGGGCTGCTCCAAGTGAGAATCGTGAGGGTGGCCAAGTCCAGTTTGGACCTCTGACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457308.6
ENST00000619207.1
CDS GCA 72 bp GCAGAGTTGGGTCCCGAGCCGGCTGTCGGGAGGTGCTaGCCAAGGGTCAGAGGTCCAAACTGGACTTGGCCA +
Preference number: 6 (lower is better)
Translates to: AELGPEPAVGRC*PRVRGPNWTWP
Trigger: TGGCCAAGTCCAGTTTGGACCTCTGACCCTTGGGCAGCACCTCCCGACAGCCGGCTCGGGACCCAACTCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000619207.1
ENST00000622155.4
CDS GCA 72 bp CTCGCAGAGTTGGGTCCCGAGCCGGCTGTCGGGAGGTaGTGCCCAAGGGTCAGAGGTCCAAACTGGACTTGG +
Preference number: 6 (lower is better)
Translates to: LAELGPEPAVGR*CPRVRGPNWTW
Trigger: CCAAGTCCAGTTTGGACCTCTGACCCTTGGGCAGCACCTCCCGACAGCCGGCTCGGGACCCAACTCTGCGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000619207.1
ENST00000622155.4
CDS CAA 90 bp GGCTGTCGGGAGGTGCTGCCCAAGGGTCAGAGGTCCAAACTGGACTaGGCCACCCTCACGATTCTCACTTGGAGCAGCCCTGCGGTGGCC +
Preference number: 6 (lower is better)
Translates to: GCREVLPKGQRSKLD*ATLTILTWSSPAVA
Trigger: GGCCACCGCAGGGCTGCTCCAAGTGAGAATCGTGAGGGTGGCCAAGTCCAGTTTGGACCTCTGACCCTTGGGCAGCACCTCCCGACAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000457308.6
ENST00000619207.1
ENST00000622155.4
CDS CCA 72 bp TCCAAACTGGACTTGGCCACCCTCACGATTCTCACTTaGAGCAGCCCTGCGGTGGCCCAGCTGCAGCGGCAC +
Preference number: 6 (lower is better)
Translates to: SKLDLATLTILT*SSPAVAQLQRH
Trigger: GTGCCGCTGCAGCTGGGCCACCGCAGGGCTGCTCCAAGTGAGAATCGTGAGGGTGGCCAAGTCCAGTTTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000457308.6
ENST00000619207.1
ENST00000622155.4
CDS CAA 72 bp GTCCAAACTGGACTTGGCCACCCTCACGATTCTCACTaGGAGCAGCCCTGCGGTGGCCCAGCTGCAGCGGCA +
Preference number: 6 (lower is better)
Translates to: VQTGLGHPHDSH*EQPCGGPAAAA
Trigger: TGCCGCTGCAGCTGGGCCACCGCAGGGCTGCTCCAAGTGAGAATCGTGAGGGTGGCCAAGTCCAGTTTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000457308.6
ENST00000619207.1
ENST00000622155.4
CDS CCA 72 bp GCTTATGTTACTGTTGCTAGGTCTGGCTCGCAGAGTTaGGTCCCGAGCCGGCTGTCGGGAGGTGCTGCCCAA +
Preference number: 6 (lower is better)
Translates to: AYVTVARSGSQS*VPSRLSGGAAQ
Trigger: TTGGGCAGCACCTCCCGACAGCCGGCTCGGGACCCAACTCTGCGAGCCAGACCTAGCAACAGTAACATAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619207.1
CDS CCA 72 bp AGGTGCTGCCCAAGGGTCAGAGGTCCAAACTGGACTTaGCCACCCTCACGATTCTCACTTGGAGCAGCCCTG +
Preference number: 6 (lower is better)
Translates to: RCCPRVRGPNWT*PPSRFSLGAAL
Trigger: CAGGGCTGCTCCAAGTGAGAATCGTGAGGGTGGCCAAGTCCAGTTTGGACCTCTGACCCTTGGGCAGCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000457308.6
ENST00000619207.1
ENST00000622155.4
CDS CCA 72 bp GTCGGGAGGTGCTGCCCAAGGGTCAGAGGTCCAAACTaGACTTGGCCACCCTCACGATTCTCACTTGGAGCA +
Preference number: 6 (lower is better)
Translates to: VGRCCPRVRGPN*TWPPSRFSLGA
Trigger: TGCTCCAAGTGAGAATCGTGAGGGTGGCCAAGTCCAGTTTGGACCTCTGACCCTTGGGCAGCACCTCCCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000457308.6
ENST00000619207.1
ENST00000622155.4
CDS CAA 72 bp GAGGTGCTGCCCAAGGGTCAGAGGTCCAAACTGGACTaGGCCACCCTCACGATTCTCACTTGGAGCAGCCCT +
Preference number: 6 (lower is better)
Translates to: EVLPKGQRSKLD*ATLTILTWSSP
Trigger: AGGGCTGCTCCAAGTGAGAATCGTGAGGGTGGCCAAGTCCAGTTTGGACCTCTGACCCTTGGGCAGCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000457308.6
ENST00000619207.1
ENST00000622155.4
CDS CCA 72 bp ATCCAAGTCGGGAACGAGGGAAGGTTCCTGTCCAGCTaGCCAGTACCGCTCATCGTTACAGCAATCAGGCTC +
Preference number: 6 (lower is better)
Translates to: IQVGNEGRFLSS*PVPLIVTAIRL
Trigger: GAGCCTGATTGCTGTAACGATGAGCGGTACTGGCCAGCTGGACAGGAACCTTCCCTCGTTCCCGACTTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000619207.1
ENST00000620517.4
ENST00000622155.4
CDS GCA 72 bp TCTCTTTCTTCCCAAGCAGGGAGTGATTGCCTCTCTTaGAGAATGGACTGGAACTGTCTGGAAGCCCGGCTT +
Preference number: 6 (lower is better)
Translates to: SLSSQAGSDCLS*RMDWNCLEARL
Trigger: AAGCCGGGCTTCCAGACAGTTCCAGTCCATTCTGCAAGAGAGGCAATCACTCCCTGCTTGGGAAGAAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492042.1
CDS CCA 72 bp CTGTATCTCCTTCTAGCCTTCTCAGCAGCACTCCCGTaGTGCAGTATAACAGTCTGGTGGCTGAGGACTTAC +
Preference number: 6 (lower is better)
Translates to: LYLLLAFSAALP*CSITVWWLRTY
Trigger: GTAAGTCCTCAGCCACCAGACTGTTATACTGCACCACGGGAGTGCTGCTGAGAAGGCTAGAAGGAGATACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474104.5
ENST00000622155.4
CDS CAA 90 bp AGGGGTACTTTGGCTTTGGGTTTCCATTTTGGGCGTGACTCTCCTTaGCTTATGTTACTGTTGCTAGGTCTGGCTCGCAGAGTTGGGTCC +
Preference number: 6 (lower is better)
Translates to: RGTLALGFHFGRDSP*LMLLLLGLARRVGS
Trigger: GGACCCAACTCTGCGAGCCAGACCTAGCAACAGTAACATAAGCAAAGGAGAGTCACGCCCAAAATGGAAACCCAAAGCCAAAGTACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619207.1
CDS GCA 72 bp TATCTCCTTCTAGCCTTCTCAGCAGCACTCCCGTGGTaGAGTATAACAGTCTGGTGGCTGAGGACTTACACA +
Preference number: 6 (lower is better)
Translates to: YLLLAFSAALPW*SITVWWLRTYT
Trigger: TGTGTAAGTCCTCAGCCACCAGACTGTTATACTGCACCACGGGAGTGCTGCTGAGAAGGCTAGAAGGAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474104.5
ENST00000622155.4
CDS CCA 72 bp CAAGCAGGGAGTGATTGCCTCTCTTGCAGAATGGACTaGAACTGTCTGGAAGCCTGTTTCATTCGGAACTGC +
Preference number: 6 (lower is better)
Translates to: QAGSDCLSCRMD*NCLEACFIRNC
Trigger: GCAGTTCCGAATGAAACAGGCTTCCAGACAGTTCCAGTCCATTCTGCAAGAGAGGCAATCACTCCCTGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000620517.4
ENST00000622155.4
CDS CCA 72 bp CTTCCCAAGCAGGGAGTGATTGCCTCTCTTGCAGAATaGACTGGAACTGTCTGGAAGCCTGTTTCATTCGGA +
Preference number: 6 (lower is better)
Translates to: LPKQGVIASLAE*TGTVWKPVSFG
Trigger: TCCGAATGAAACAGGCTTCCAGACAGTTCCAGTCCATTCTGCAAGAGAGGCAATCACTCCCTGCTTGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000620517.4
ENST00000622155.4
CDS CCA 72 bp CTTCCCAAGCAGGGAGTGATTGCCTCTCTTGCAGAATaGACTGGAACTGTCTGGAAGCCCGGCTTTTTGTAT +
Preference number: 6 (lower is better)
Translates to: LPKQGVIASLAE*TGTVWKPGFLY
Trigger: ATACAAAAAGCCGGGCTTCCAGACAGTTCCAGTCCATTCTGCAAGAGAGGCAATCACTCCCTGCTTGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492042.1
CDS TCA 72 bp GCTCCCACATCTCCATCACACATCCTCAGGACCGCTTaGCAGCGTTCAGTATTGAAACCATACCTGGAAAGT +
Preference number: 6 (lower is better)
Translates to: APTSPSHILRTA*QRSVLKPYLES
Trigger: ACTTTCCAGGTATGGTTTCAATACTGAACGCTGTCAAGCGGTCCTGAGGATGTGTGATGGAGATGTGGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000620517.4
ENST00000622155.4
CDS GCA 72 bp TCTCTTTCTTCCCAAGCAGGGAGTGATTGCCTCTCTTaGAGAATGGACTGGAACTGTCTGGAAGCCTGTTTC +
Preference number: 6 (lower is better)
Translates to: SLSSQAGSDCLS*RMDWNCLEACF
Trigger: GAAACAGGCTTCCAGACAGTTCCAGTCCATTCTGCAAGAGAGGCAATCACTCCCTGCTTGGGAAGAAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000620517.4
ENST00000622155.4
CDS CCA 72 bp CAGAGCATACAAACCTTGACACTTTCTAACCGAATCTaGTATCCCACGGTCAGACCCACCCTCTCTGCTCTT +
Preference number: 6 (lower is better)
Translates to: QSIQTLTLSNRI*YPTVRPTLSAL
Trigger: AAGAGCAGAGAGGGTGGGTCTGACCGTGGGATACCAGATTCGGTTAGAAAGTGTCAAGGTTTGTATGCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474104.5
ENST00000622155.4
CDS CAA 72 bp TTGGCTTTGGGTTTCCATTTTGGGCGTGACTCTCCTTaGCTTATGTTACTGTTGCTAGGTCTGGAAGGGCGC +
Preference number: 6 (lower is better)
Translates to: LALGFHFGRDSP*LMLLLLGLEGR
Trigger: GCGCCCTTCCAGACCTAGCAACAGTAACATAAGCAAAGGAGAGTCACGCCCAAAATGGAAACCCAAAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000622155.4
CDS CAA 90 bp AGGGGTACTTTGGCTTTGGGTTTCCATTTTGGGCGTGACTCTCCTTaGCTTATGTTACTGTTGCTAGGTCTGGAAGGGCGCCTTGATTCA +
Preference number: 6 (lower is better)
Translates to: RGTLALGFHFGRDSP*LMLLLLGLEGRLDS
Trigger: TGAATCAAGGCGCCCTTCCAGACCTAGCAACAGTAACATAAGCAAAGGAGAGTCACGCCCAAAATGGAAACCCAAAGCCAAAGTACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000622155.4
CDS TCA 72 bp GTTATGTTGCCCTGGATGGTCTTGCACTCCTGGCCTTaGGTGATCCTTTGTTGGATTTGTTGGGATTGGATG +
Preference number: 6 (lower is better)
Translates to: VMLPWMVLHSWP*VILCWICWDWM
Trigger: CATCCAATCCCAACAAATCCAACAAAGGATCACTCAAGGCCAGGAGTGCAAGACCATCCAGGGCAACATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479345.2
ENST00000492042.1
CDS CCA 72 bp TCCTGTCGCTGTTCCATACACTCATCCAAGCTTATCTaGTTGACTGCCTCAGAGATCTTCATCCTCTCTCCA +
Preference number: 6 (lower is better)
Translates to: SCRCSIHSSKLI*LTASEIFILSP
Trigger: TGGAGAGAGGATGAAGATCTCTGAGGCAGTCAACCAGATAAGCTTGGATGAGTGTATGGAACAGCGACAGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000620517.4
ENST00000622155.4
CDS CAA 72 bp CCCAGAAAGGCCTCTTTCAGATCCAGCATCAGCATCTaGTTCTTGCAGGTCTCGGAGAAGAGCTTTCACTTT +
Preference number: 6 (lower is better)
Translates to: PRKASFRSSISI*FLQVSEKSFHF
Trigger: AAAGTGAAAGCTCTTCTCCGAGACCTGCAAGAACAAGATGCTGATGCTGGATCTGAAAGAGGCCTTTCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000619207.1
ENST00000620517.4
ENST00000622155.4
CDS CAA 90 bp GCCTCTTCCTGTCGCTGTTCCATACACTCATCCAAGCTTATCTGGTaGACTGCCTCAGAGATCTTCATCCTCTCTCCAAATGTCTCTGAA +
Preference number: 6 (lower is better)
Translates to: ASSCRCSIHSSKLIW*TASEIFILSPNVSE
Trigger: TTCAGAGACATTTGGAGAGAGGATGAAGATCTCTGAGGCAGTCAACCAGATAAGCTTGGATGAGTGTATGGAACAGCGACAGGAAGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000620517.4
ENST00000622155.4
CDS CAA 90 bp GTCCTAGAGGGTACTGGCAGAAAGTTCACAGGAGGGTCACTATACTaGTGGTGGGTATTCGTTAGTAACTTGACTATTTCCGACTCTTCC +
Preference number: 6 (lower is better)
Translates to: VLEGTGRKFTGGSLY*WWVFVSNLTISDSS
Trigger: GGAAGAGTCGGAAATAGTCAAGTTACTAACGAATACCCACCACAAGTATAGTGACCCTCCTGTGAACTTTCTGCCAGTACCCTCTAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000620517.4
ENST00000622155.4
CDS CAA 90 bp ACAGAGTCTTGTTATGTTGCCCTGGATGGTCTTGCACTCCTGGCCTaGAGTGATCCTTTGTTGGATTTGTTGGGATTGGATGTAGAAGAC +
Preference number: 6 (lower is better)
Translates to: TESCYVALDGLALLA*SDPLLDLLGLDVED
Trigger: GTCTTCTACATCCAATCCCAACAAATCCAACAAAGGATCACTCAAGGCCAGGAGTGCAAGACCATCCAGGGCAACATAACAAGACTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479345.2
ENST00000492042.1
CDS CCA 72 bp TATGTAAACGACAAGCCAGAGGTAGGTTCTCATTGGTaGAATAAAATGCCACGAGCGGAGCTTGGTAGGGAT +
Preference number: 6 (lower is better)
Translates to: YVNDKPEVGSHW*NKMPRAELGRD
Trigger: ATCCCTACCAAGCTCCGCTCGTGGCATTTTATTCCACCAATGAGAACCTACCTCTGGCTTGTCGTTTACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000620517.4
ENST00000622155.4
CDS CAA 72 bp GAGTCTGAAGGGGTACTTTGGCTTTGGGTTTCCATTTaGGGCGTGACTCTCCTTTGCTTATGTTACTGTTGC +
Preference number: 6 (lower is better)
Translates to: ESEGVLWLWVSI*GVTLLCLCYCC
Trigger: GCAACAGTAACATAAGCAAAGGAGAGTCACGCCCAAAATGGAAACCCAAAGCCAAAGTACCCCTTCAGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000619207.1
ENST00000620517.4
ENST00000622155.4
CDS CAA 72 bp AAGGCCTCTTTCAGATCCAGCATCAGCATCTTGTTCTaGCAGGTCTCGGAGAAGAGCTTTCACTTTCTCTTG +
Preference number: 6 (lower is better)
Translates to: KASFRSSISILF*QVSEKSFHFLL
Trigger: CAAGAGAAAGTGAAAGCTCTTCTCCGAGACCTGCAAGAACAAGATGCTGATGCTGGATCTGAAAGAGGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000619207.1
ENST00000620517.4
ENST00000622155.4
CDS CAA 72 bp CTGTCCAATACAGCAACACCTGGCTACATGTGGCTATaGAGCACCTGTTTCATTCGGAACTGCTTGCAGATT +
Preference number: 6 (lower is better)
Translates to: LSNTATPGYMWL*STCFIRNCLQI
Trigger: AATCTGCAAGCAGTTCCGAATGAAACAGGTGCTCAATAGCCACATGTAGCCAGGTGTTGCTGTATTGGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479345.2
CDS CAA 72 bp TGTTATGTTGCCCTGGATGGTCTTGCACTCCTGGCCTaGAGTGATCCTTTGTTGGATTTGTTGGGATTGGAT +
Preference number: 6 (lower is better)
Translates to: CYVALDGLALLA*SDPLLDLLGLD
Trigger: ATCCAATCCCAACAAATCCAACAAAGGATCACTCAAGGCCAGGAGTGCAAGACCATCCAGGGCAACATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479345.2
ENST00000492042.1
CDS CAA 72 bp AACCCTATATCCGATAACAGTTCCGTGAATTGTCGTTaGAGGCTGGCCATTTCTCACCTGCAGAACTCTTCC +
Preference number: 6 (lower is better)
Translates to: NPISDNSSVNCR*RLAISHLQNSS
Trigger: GGAAGAGTTCTGCAGGTGAGAAATGGCCAGCCTCAAACGACAATTCACGGAACTGTTATCGGATATAGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622155.4
CDS CAA 90 bp AGTGTCTCACCTGCACTACATTTGGATACAAAGCAGCACACAGCATaGCTGATATCAGCTTGGGGTTCTCAGCATTTGAGTTTGCCTCTT +
Preference number: 6 (lower is better)
Translates to: SVSPALHLDTKQHTA*LISAWGSQHLSLPL
Trigger: AAGAGGCAAACTCAAATGCTGAGAACCCCAAGCTGATATCAGCAATGCTGTGTGCTGCTTTGTATCCAAATGTAGTGCAGGTGAGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452978.5
CDS CAA 90 bp GTTGCCCTGGATGGTCTTGCACTCCTGGCCTTGAGTGATCCTTTGTaGGATTTGTTGGGATTGGATGTAGAAGACTTTATTCAGAATGCT +
Preference number: 6 (lower is better)
Translates to: VALDGLALLALSDPL*DLLGLDVEDFIQNA
Trigger: AGCATTCTGAATAAAGTCTTCTACATCCAATCCCAACAAATCCAACAAAGGATCACTCAAGGCCAGGAGTGCAAGACCATCCAGGGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479345.2
ENST00000492042.1
CDS TCA 72 bp AAGGGGTACTTTGGCTTTGGGTTTCCATTTTGGGCGTaGCTCTCCTTTGCTTATGTTACTGTTGCTAGGTCT +
Preference number: 6 (lower is better)
Translates to: KGYFGFGFPFWA*LSFAYVTVARS
Trigger: AGACCTAGCAACAGTAACATAAGCAAAGGAGAGTCACGCCCAAAATGGAAACCCAAAGCCAAAGTACCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000619207.1
ENST00000622155.4
CDS TCA 72 bp GTTAAGAATGGTTTCTCTTTCTTCCCAAGCAGGGAGTaGTTGCCTCTCTTGCAGAATGGACTGGAACTGTCT +
Preference number: 6 (lower is better)
Translates to: VKNGFSFFPSRE*LPLLQNGLELS
Trigger: AGACAGTTCCAGTCCATTCTGCAAGAGAGGCAATCACTCCCTGCTTGGGAAGAAAGAGAAACCATTCTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000492042.1
ENST00000620517.4
ENST00000622155.4
CDS TCA 72 bp AAGGGGTACTTTGGCTTTGGGTTTCCATTTTGGGCGTaGCTCTCCTTTGCTTATGTTACTGTTGCTAGGTCA +
Preference number: 6 (lower is better)
Translates to: KGYFGFGFPFWA*LSFAYVTVARS
Trigger: TGACCTAGCAACAGTAACATAAGCAAAGGAGAGTCACGCCCAAAATGGAAACCCAAAGCCAAAGTACCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479345.2
ENST00000620517.4
CDS GCA 72 bp AGAACTTTCCGTGTTGATGGAAATGTTCTATACCTGTaGTGTCCAATACAGCAACACCTGGCTACATGTGGC +
Preference number: 6 (lower is better)
Translates to: RTFRVDGNVLYL*CPIQQHLATCG
Trigger: GCCACATGTAGCCAGGTGTTGCTGTATTGGACAGCACAGGTATAGAACATTTCCATCAACACGGAAAGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479345.2
CDS CCA 72 bp TCTCAGAAGTCATATGTAGAGTCTGAAGGGGTACTTTaGCTTTGGGTTTCCATTTTGGGCGTGACTCTCCTT +
Preference number: 6 (lower is better)
Translates to: SQKSYVESEGVL*LWVSILGVTLL
Trigger: AAGGAGAGTCACGCCCAAAATGGAAACCCAAAGCCAAAGTACCCCTTCAGACTCTACATATGACTTCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000619207.1
ENST00000620517.4
ENST00000622155.4
CDS CCA 72 bp AAATATGTAAACGACAAGCCAGAGGTAGGTTCTCATTaGTGGAATAAAATGCCACGAGCGGAGCTTGGTAGG +
Preference number: 6 (lower is better)
Translates to: KYVNDKPEVGSH*WNKMPRAELGR
Trigger: CCTACCAAGCTCCGCTCGTGGCATTTTATTCCACCAATGAGAACCTACCTCTGGCTTGTCGTTTACATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000620517.4
ENST00000622155.4
CDS CCA 72 bp ACAGGCAGGATTATTTATTCTGGTCCTAGAGGGTACTaGCAGAAAGTTCACAGGAGGGTCACTATACTTGTG +
Preference number: 6 (lower is better)
Translates to: TGRIIYSGPRGY*QKVHRRVTILV
Trigger: CACAAGTATAGTGACCCTCCTGTGAACTTTCTGCCAGTACCCTCTAGGACCAGAATAAATAATCCTGCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000620517.4
ENST00000622155.4
CDS CAA 72 bp TGTCGCTGTTCCATACACTCATCCAAGCTTATCTGGTaGACTGCCTCAGAGATCTTCATCCTCTCTCCAAAT +
Preference number: 6 (lower is better)
Translates to: CRCSIHSSKLIW*TASEIFILSPN
Trigger: ATTTGGAGAGAGGATGAAGATCTCTGAGGCAGTCAACCAGATAAGCTTGGATGAGTGTATGGAACAGCGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000620517.4
ENST00000622155.4
CDS CAA 72 bp CTGGATGGTCTTGCACTCCTGGCCTTGAGTGATCCTTaGTTGGATTTGTTGGGATTGGATGTAGAAGACTTT +
Preference number: 6 (lower is better)
Translates to: LDGLALLALSDP*LDLLGLDVEDF
Trigger: AAAGTCTTCTACATCCAATCCCAACAAATCCAACAAAGGATCACTCAAGGCCAGGAGTGCAAGACCATCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479345.2
ENST00000492042.1
CDS CAA 90 bp ATACCTGTGCTGTCCAATACAGCAACACCTGGCTACATGTGGCTATaGAGCACCTGTTTCATTCGGAACTGCTTGCAGATTTTACCATTT +
Preference number: 6 (lower is better)
Translates to: IPVLSNTATPGYMWL*STCFIRNCLQILPF
Trigger: AAATGGTAAAATCTGCAAGCAGTTCCGAATGAAACAGGTGCTCAATAGCCACATGTAGCCAGGTGTTGCTGTATTGGACAGCACAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479345.2
CDS CCA 72 bp AAGTCATATGTAGAGTCTGAAGGGGTACTTTGGCTTTaGGTTTCCATTTTGGGCGTGACTCTCCTTTGCTTA +
Preference number: 6 (lower is better)
Translates to: KSYVESEGVLWL*VSILGVTLLCL
Trigger: TAAGCAAAGGAGAGTCACGCCCAAAATGGAAACCCAAAGCCAAAGTACCCCTTCAGACTCTACATATGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000619207.1
ENST00000620517.4
ENST00000622155.4
CDS CCA 72 bp ATCTTCATCCTCTCTCCAAATGTCTCTGAAAAACACTaGGTAAGGAGATGCTCTAGTGATGCTCCCACATCT +
Preference number: 6 (lower is better)
Translates to: IFILSPNVSEKH*VRRCSSDAPTS
Trigger: AGATGTGGGAGCATCACTAGAGCATCTCCTTACCCAGTGTTTTTCAGAGACATTTGGAGAGAGGATGAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000620517.4
ENST00000622155.4
CDS CCA 72 bp ACTGGCAGAAAGTTCACAGGAGGGTCACTATACTTGTaGTGGGTATTCGTTAGTAACTTGACTATTTCCGAC +
Preference number: 6 (lower is better)
Translates to: TGRKFTGGSLYL*WVFVSNLTISD
Trigger: GTCGGAAATAGTCAAGTTACTAACGAATACCCACCACAAGTATAGTGACCCTCCTGTGAACTTTCTGCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000620517.4
ENST00000622155.4
CDS CCA 72 bp ATTCTTATTCAATCTTCCCTCAGTCAGTGGTATTGCTaGGGACAGCAAGTGATAGAACATGGTGTGGCTGAA +
Preference number: 6 (lower is better)
Translates to: ILIQSSLSQWYC*GQQVIEHGVAE
Trigger: TTCAGCCACACCATGTTCTATCACTTGCTGTCCCCAGCAATACCACTGACTGAGGGAAGATTGAATAAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497514.2
CDS CAA 72 bp CAGCAGAATGTTTCCTCTTTCTCCTTCATTATGGTCTaGCTGGCTCATCTCTTTTCCTGCAGAACTCTTCCA +
Preference number: 6 (lower is better)
Translates to: QQNVSSFSFIMV*LAHLFSCRTLP
Trigger: TGGAAGAGTTCTGCAGGAAAAGAGATGAGCCAGCAAGACCATAATGAAGGAGAAAGAGGAAACATTCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442331.1
CDS CAA 72 bp GGTACTGGCAGAAAGTTCACAGGAGGGTCACTATACTaGTGGTGGGTATTCGTTAGTAACTTGACTATTTCC +
Preference number: 6 (lower is better)
Translates to: GTGRKFTGGSLY*WWVFVSNLTIS
Trigger: GGAAATAGTCAAGTTACTAACGAATACCCACCACAAGTATAGTGACCCTCCTGTGAACTTTCTGCCAGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000620517.4
ENST00000622155.4
CDS CAA 90 bp GCTGGCTCATCTCTTTTCCTGCAGAACTCTTCCAGACAAGAAGTTTaGTCTGCAGTAATTATAACTTGCACGCACGCCTTCTTTTGTACT +
Preference number: 6 (lower is better)
Translates to: AGSSLFLQNSSRQEV*SAVIITCTHAFFCT
Trigger: AGTACAAAAGAAGGCGTGCGTGCAAGTTATAATTACTGCAGACAAAACTTCTTGTCTGGAAGAGTTCTGCAGGAAAAGAGATGAGCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442331.1
CDS CAA 90 bp AACCATAAATTTCTGTTACCAGGAAATAAGCAGAGCATACAAACCTaGACACTTTCTAACCGAATCTGGTATCCCACGGTCAGACCCACC +
Preference number: 6 (lower is better)
Translates to: NHKFLLPGNKQSIQT*TLSNRIWYPTVRPT
Trigger: GGTGGGTCTGACCGTGGGATACCAGATTCGGTTAGAAAGTGTCAAGGTTTGTATGCTCTGCTTATTTCCTGGTAACAGAAATTTATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474104.5
ENST00000622155.4
CDS CAA 90 bp TATGTTGCCCTGGATGGTCTTGCACTCCTGGCCTTGAGTGATCCTTaGTTGGATTTGTTGGGATTGGATGTAGAAGACTTTATTCAGAAT +
Preference number: 6 (lower is better)
Translates to: YVALDGLALLALSDP*LDLLGLDVEDFIQN
Trigger: ATTCTGAATAAAGTCTTCTACATCCAATCCCAACAAATCCAACAAAGGATCACTCAAGGCCAGGAGTGCAAGACCATCCAGGGCAACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479345.2
ENST00000492042.1
CDS GCA 72 bp GGAACTGTCTGGAAGCCTGTTTCATTCGGAACTGCTTaGAGATTTTACCATTTTCAGCATGTACTGACTTTG +
Preference number: 6 (lower is better)
Translates to: GTVWKPVSFGTA*RFYHFQHVLTL
Trigger: CAAAGTCAGTACATGCTGAAAATGGTAAAATCTGCAAGCAGTTCCGAATGAAACAGGCTTCCAGACAGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000620517.4
ENST00000622155.4
CDS GCA 72 bp TTTATTCTTATTCAATCTTCCCTCAGTCAGTGGTATTaGTGGGGACAGCAAGTGATAGAACATGGTGTGGCT +
Preference number: 6 (lower is better)
Translates to: FILIQSSLSQWY*WGQQVIEHGVA
Trigger: AGCCACACCATGTTCTATCACTTGCTGTCCCCAGCAATACCACTGACTGAGGGAAGATTGAATAAGAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497514.2
CDS CAA 72 bp TCTCTTTTCCTGCAGAACTCTTCCAGACAAGAAGTTTaGTCTGCAGTAATTATAACTTGCACGCACGCCTTC +
Preference number: 6 (lower is better)
Translates to: SLFLQNSSRQEV*SAVIITCTHAF
Trigger: GAAGGCGTGCGTGCAAGTTATAATTACTGCAGACAAAACTTCTTGTCTGGAAGAGTTCTGCAGGAAAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442331.1
CDS CAA 72 bp GATGGTCTTGCACTCCTGGCCTTGAGTGATCCTTTGTaGGATTTGTTGGGATTGGATGTAGAAGACTTTATT +
Preference number: 6 (lower is better)
Translates to: DGLALLALSDPL*DLLGLDVEDFI
Trigger: AATAAAGTCTTCTACATCCAATCCCAACAAATCCAACAAAGGATCACTCAAGGCCAGGAGTGCAAGACCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479345.2
ENST00000492042.1
CDS TCA 72 bp GGACGACCTGTAAACATTAAGTATACTCCACCATTCTaGCCTGATAGTTCACTGATGAAGGGTGAATGTGTA +
Preference number: 6 (lower is better)
Translates to: GRPVNIKYTPPF*PDSSLMKGECV
Trigger: TACACATTCACCCTTCATCAGTGAACTATCAGGTCAGAATGGTGGAGTATACTTAATGTTTACAGGTCGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497514.2
CDS GCA 72 bp CCACATCCAGTCATACCACTTATGACAACCACCTGGTaGTTACGCAATAAGTTAAGAATGGTTTCTCTTTCT +
Preference number: 6 (lower is better)
Translates to: PHPVIPLMTTTW*LRNKLRMVSLS
Trigger: AGAAAGAGAAACCATTCTTAACTTATTGCGTAAGCACCAGGTGGTTGTCATAAGTGGTATGACTGGATGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000622155.4
CDS GCA 72 bp AAACCGAAAGATTTTCTGGGTGAAATAAAGCCCTCTTaGTTAGCACATATCCAGTTCTTCCCAACAAGAGTC +
Preference number: 6 (lower is better)
Translates to: KPKDFLGEIKPS*LAHIQFFPTRV
Trigger: GACTCTTGTTGGGAAGAACTGGATATGTGCTAAGCAAGAGGGCTTTATTTCACCCAGAAAATCTTTCGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479345.2
ENST00000492042.1
CDS CCA 72 bp ATTGAAACCATACCTGGAAAGTTTTTGCACTGCAAATaGGGAGACTGTAAATTCTGGAACATAAGGCTCCAC +
Preference number: 6 (lower is better)
Translates to: IETIPGKFLHCK*GDCKFWNIRLH
Trigger: GTGGAGCCTTATGTTCCAGAATTTACAGTCTCCCCATTTGCAGTGCAAAAACTTTCCAGGTATGGTTTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000619207.1
ENST00000620517.4
ENST00000622155.4
CDS CCA 72 bp TTCCCACATCCAGTCATACCACTTATGACAACCACCTaGTGCTTACGCAATAAGTTAAGAATGGTTTCTCTT +
Preference number: 6 (lower is better)
Translates to: FPHPVIPLMTTT*CLRNKLRMVSL
Trigger: AAGAGAAACCATTCTTAACTTATTGCGTAAGCACCAGGTGGTTGTCATAAGTGGTATGACTGGATGTGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000622155.4
CDS CCA 72 bp TTGTCATCTTACAGAGATATGATCTTTGAGCATCTATaGGTCTCTCCCTCCAAACACAGCATGCCGTTTATT +
Preference number: 6 (lower is better)
Translates to: LSSYRDMIFEHL*VSPSKHSMPFI
Trigger: AATAAACGGCATGCTGTGTTTGGAGGGAGAGACCCATAGATGCTCAAAGATCATATCTCTGTAAGATGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474104.5
CDS CCA 72 bp AGTCTGTTTATTCTTATTCAATCTTCCCTCAGTCAGTaGTATTGCTGGGGACAGCAAGTGATAGAACATGGT +
Preference number: 6 (lower is better)
Translates to: SLFILIQSSLSQ*YCWGQQVIEHG
Trigger: ACCATGTTCTATCACTTGCTGTCCCCAGCAATACCACTGACTGAGGGAAGATTGAATAAGAATAAACAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497514.2
CDS CAA 72 bp GGGTCACTATACTTGTGGTGGGTATTCGTTAGTAACTaGACTATTTCCGACTCTTCCTCTAAAAGGGTTATC +
Preference number: 6 (lower is better)
Translates to: GSLYLWWVFVSN*TISDSSSKRVI
Trigger: GATAACCCTTTTAGAGGAAGAGTCGGAAATAGTCAAGTTACTAACGAATACCCACCACAAGTATAGTGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000620517.4
ENST00000622155.4
CDS CAA 72 bp TTGGCTTTGGGTTTCCATTTTGGGCGTGACTCTCCTTaGCTTATGTTACTGTTGCTAGGTCATTGTGTTATA +
Preference number: 6 (lower is better)
Translates to: LALGFHFGRDSP*LMLLLLGHCVI
Trigger: TATAACACAATGACCTAGCAACAGTAACATAAGCAAAGGAGAGTCACGCCCAAAATGGAAACCCAAAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479345.2
ENST00000620517.4
CDS CAA 72 bp CTTGCACTCCTGGCCTTGAGTGATCCTTTGTTGGATTaGTTGGGATTGGATGTAGAAGACTTTATTCAGAAT +
Preference number: 6 (lower is better)
Translates to: LALLALSDPLLD*LGLDVEDFIQN
Trigger: ATTCTGAATAAAGTCTTCTACATCCAATCCCAACAAATCCAACAAAGGATCACTCAAGGCCAGGAGTGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479345.2
ENST00000492042.1
CDS TCA 72 bp GGTCACTATACTTGTGGTGGGTATTCGTTAGTAACTTaGCTATTTCCGACTCTTCCTCTAAAAGGGTTATCA +
Preference number: 6 (lower is better)
Translates to: GHYTCGGYSLVT*LFPTLPLKGLS
Trigger: TGATAACCCTTTTAGAGGAAGAGTCGGAAATAGTCAAGTTACTAACGAATACCCACCACAAGTATAGTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000620517.4
ENST00000622155.4
CDS TCA 72 bp ACCTTTCTTCTGTCCTCTCATGAACTTCATCAACAATaGTATGGGAAACTCCTTGTAGAGCTGTATCTCCTT +
Preference number: 6 (lower is better)
Translates to: TFLLSSHELHQQ*YGKLLVELYLL
Trigger: AAGGAGATACAGCTCTACAAGGAGTTTCCCATATCATTGTTGATGAAGTTCATGAGAGGACAGAAGAAAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474104.5
CDS CAA 90 bp TTCACAGGAGGGTCACTATACTTGTGGTGGGTATTCGTTAGTAACTaGACTATTTCCGACTCTTCCTCTAAAAGGGTTATCAAAGAATAT +
Preference number: 6 (lower is better)
Translates to: FTGGSLYLWWVFVSN*TISDSSSKRVIKEY
Trigger: ATATTCTTTGATAACCCTTTTAGAGGAAGAGTCGGAAATAGTCAAGTTACTAACGAATACCCACCACAAGTATAGTGACCCTCCTGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000620517.4
ENST00000622155.4
CDS GCA 72 bp TTCAGTATTGAAACCATACCTGGAAAGTTTTTGCACTaGAAATGGGGAGACTGTAAATTCTGGAACATAAGG +
Preference number: 6 (lower is better)
Translates to: FSIETIPGKFLH*KWGDCKFWNIR
Trigger: CCTTATGTTCCAGAATTTACAGTCTCCCCATTTGCAGTGCAAAAACTTTCCAGGTATGGTTTCAATACTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000457308.6
ENST00000474104.5
ENST00000479345.2
ENST00000619207.1
ENST00000620517.4
ENST00000622155.4
CDS CCA 72 bp ACAGTTCTCAATCTGTCTGCTCCTTATTTGGTTAAATaGATTATGTCCCAAGTTCAAGAGCAAAACAGTCTT +
Preference number: 6 (lower is better)
Translates to: TVLNLSAPYLVK*IMSQVQEQNSL
Trigger: AAGACTGTTTTGCTCTTGAACTTGGGACATAATCCATTTAACCAAATAAGGAGCAGACAGATTGAGAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474104.5
ENST00000622155.4
CDS CAA 90 bp CACCAGCAGTTCCATTTAATAGGAAACCATACTAAACATAGTTTCTaGCCAGGGACAGTAATAAAAGCCTTTCTACTTCATATCACAATG +
Preference number: 6 (lower is better)
Translates to: HQQFHLIGNHTKHSF*PGTVIKAFLLHITM
Trigger: CATTGTGATATGAAGTAGAAAGGCTTTTATTACTGTCCCTGGCAAGAAACTATGTTTAGTATGGTTTCCTATTAAATGGAACTGCTGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474104.5
ENST00000622155.4