RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DHX35 (Homo sapiens)

Ensembl gene IDs: ENSG00000101452

Ensembl transcript IDs: ENST00000252011.8, ENST00000373323.8, ENST00000373325.6, ENST00000449559.1, ENST00000482619.1, ENST00000484417.5, ENST00000493450.1, ENST00000652169.1

Found 841 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGGACCAGGGGCAGCAGCATGGAGGAGAGGACGCCAGCAGTCCCTaGAGCTGTAGCTGTGGGCTCCTCTCACGGGTCCTGGACCTTGGC +
Preference number: 1 (lower is better)
Translates to: WDQGQQHGGEDASSP*SCSCGLLSRVLDLG
Trigger: GCCAAGGTCCAGGACCCGTGAGAGGAGCCCACAGCTACAGCTGCAGGGACTGCTGGCGTCCTCTCCTCCATGCTGCTGCCCCTGGTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR GCA 90 bp GGCCGCAGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTaGCAGCTCACCCCACCTGGGACCAGGGGCAGCAGCATGGAGGAG +
Preference number: 1 (lower is better)
Translates to: GRSPLQSNQTFHRSW*QLTPPGTRGSSMEE
Trigger: CTCCTCCATGCTGCTGCCCCTGGTCCCAGGTGGGGTGAGCTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCTGCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR CCA 90 bp ACAGGCCGCAGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTaGTGCCAGCTCACCCCACCTGGGACCAGGGGCAGCAGCATGGAG +
Preference number: 1 (lower is better)
Translates to: TGRSPLQSNQTFHRS*CQLTPPGTRGSSME
Trigger: CTCCATGCTGCTGCCCCTGGTCCCAGGTGGGGTGAGCTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCTGCGGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR TCA 90 bp GCATGCCTGCTGGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTaGGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTG +
Preference number: 1 (lower is better)
Translates to: ACLLEVACWVSERAE*ANSHSARCSTEGCL
Trigger: CAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCAGGCATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR CCA 90 bp CCAGCAGTCCCTGCAGCTGTAGCTGTGGGCTCCTCTCACGGGTCCTaGACCTTGGCCCTTTTGGCTTTCAGAGACAGGTGCGTTCCTTGT +
Preference number: 1 (lower is better)
Translates to: PAVPAAVAVGSSHGS*TLALLAFRDRCVPC
Trigger: ACAAGGAACGCACCTGTCTCTGAAAGCCAAAAGGGCCAAGGTCCAGGACCCGTGAGAGGAGCCCACAGCTACAGCTGCAGGGACTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR GCA 90 bp CCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATaGACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGG +
Preference number: 1 (lower is better)
Translates to: PTPTLPAAAQKDACP*TKSSRIPARMQMLW
Trigger: CCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR GCA 90 bp CCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATaGTGTGGGCAGCGGGAAGAAAGGACTAATGAACAGGCCGCAGCC +
Preference number: 1 (lower is better)
Translates to: PAHAQSPPGSQQGCK*CGQREERTNEQAAA
Trigger: GGCTGCGGCCTGTTCATTAGTCCTTTCTTCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR GCA 90 bp AGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTaGCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATG +
Preference number: 1 (lower is better)
Translates to: SEPTPTLPAAAQKDA*PCTKSSRIPARMQM
Trigger: CATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR CCA 90 bp CTTGTTTCCCATAGAGCTGGGCCAGGACTGCATGCCTGCTGGAAGTaGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACT +
Preference number: 1 (lower is better)
Translates to: LVSHRAGPGLHACWK*HAGLVSVLSEPTPT
Trigger: AGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCAGGCATGCAGTCCTGGCCCAGCTCTATGGGAAACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR GCA 90 bp ACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGCATGCCTaGTGGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCA +
Preference number: 1 (lower is better)
Translates to: TFLLVSHRAGPGLHA*WKWHAGLVSVLSEP
Trigger: TGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCAGGCATGCAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR CCA 90 bp TTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGCATGCCTGCTaGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACT +
Preference number: 1 (lower is better)
Translates to: FLLVSHRAGPGLHAC*KWHAGLVSVLSEPT
Trigger: AGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCAGGCATGCAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR TCA 90 bp TTTTCCCGAGCGACTACGACCACCACGTCCTGCTCGCTGATTAGCTaGTGCCTGGGAGACTGGCACCACCACCAAGCATTCAATAGCTGT +
Preference number: 1 (lower is better)
Translates to: FSRATTTTTSCSLIS*CLGDWHHHQAFNSC
Trigger: ACAGCTATTGAATGCTTGGTGGTGGTGCCAGTCTCCCAGGCATCAGCTAATCAGCGAGCAGGACGTGGTGGTCGTAGTCGCTCGGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR GCA 90 bp AGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATaGAAATGCTGTGGGCAGCGGGAAGAAAGGACTAATGAACAGGCC +
Preference number: 1 (lower is better)
Translates to: RMPAHAQSPPGSQQG*KCCGQREERTNEQA
Trigger: GGCCTGTTCATTAGTCCTTTCTTCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR GCA 90 bp ACTCGGAGGTGTCTCTTCATCCCAGTGCGAGCTAGTGCTCGAGCCTaGTCGATGAGCATCGACACAACAGTTTCTACCTCTTCCTGGCCA +
Preference number: 1 (lower is better)
Translates to: TRRCLFIPVRASARA*SMSIDTTVSTSSWP
Trigger: TGGCCAGGAAGAGGTAGAAACTGTTGTGTCGATGCTCATCGAGCAGGCTCGAGCACTAGCTCGCACTGGGATGAAGAGACACCTCCGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR CCA 90 bp CCCAGCAAACCCTCTGTCCACCCCACATGGTGTTTTGGCCTTCAGTaGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTG +
Preference number: 1 (lower is better)
Translates to: PSKPSVHPTWCFGLQ*LTFLLVSHRAGPGL
Trigger: CAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGACAGAGGGTTTGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR TCA 90 bp CAGTCTTTGTCCAGACCTCCCAGAGCATACAGTAACTCCAAGGCTTaGACCATCGACTGTGCTGGAGGGGGCGACATGAAGTGGAACCTG +
Preference number: 1 (lower is better)
Translates to: QSLSRPPRAYSNSKA*TIDCAGGGDMKWNL
Trigger: CAGGTTCCACTTCATGTCGCCCCCTCCAGCACAGTCGATGGTTCAAGCCTTGGAGTTACTGTATGCTCTGGGAGGTCTGGACAAAGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484417.5
3UTR TCA 90 bp TTCGTTATAGATGACCCAGCGAGGCGGCTTCTCTGCATAGAGGACTaGCGCAGGGTGTATGTGCAGCTCATGGTCATCACGGATGGTCCT +
Preference number: 1 (lower is better)
Translates to: FVIDDPARRLLCIED*RRVYVQLMVITDGP
Trigger: AGGACCATCCGTGATGACCATGAGCTGCACATACACCCTGCGTCAGTCCTCTATGCAGAGAAGCCGCCTCGCTGGGTCATCTATAACGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR TCA 90 bp CAGTCTTTGTCCAGACCTCCCAGAGCATACAGTAACTCCAAGGCTTaGACCATCGACTGTGCTGGAGGGGGCTTGTCTGGCTGTTTTCCC +
Preference number: 1 (lower is better)
Translates to: QSLSRPPRAYSNSKA*TIDCAGGGLSGCFP
Trigger: GGGAAAACAGCCAGACAAGCCCCCTCCAGCACAGTCGATGGTTCAAGCCTTGGAGTTACTGTATGCTCTGGGAGGTCTGGACAAAGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652169.1
3UTR CCA 90 bp CCACTGGGTTTGGGAGACCCTGTGCCCATCAGACATGCCCTTTGGTaGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGAGACA +
Preference number: 1 (lower is better)
Translates to: PLGLGDPVPIRHALW*FRQRSPMFRSFVET
Trigger: TGTCTCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTCCCAAACCCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR CCA 90 bp AAGCCACTGGGTTTGGGAGACCCTGTGCCCATCAGACATGCCCTTTaGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGAG +
Preference number: 1 (lower is better)
Translates to: KPLGLGDPVPIRHAL*WFRQRSPMFRSFVE
Trigger: CTCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTCCCAAACCCAGTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR CCA 90 bp ATCCCCAATGTTTCGTTCATTCGTAGAGACATGCTTGTTCACACCTaGCAGCAGACCTCATTGGTTAACACAGCTGTGGCCCCAGCAGGG +
Preference number: 1 (lower is better)
Translates to: IPNVSFIRRDMLVHT*QQTSLVNTAVAPAG
Trigger: CCCTGCTGGGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAATGAACGAAACATTGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR GCA 90 bp GTCATCACGGATGGTCCTATAAGCTCCAGTAGAATGAAACCTCGCTaGATTGGCGAAGAAGCCGGAGACAATGCACCTCAGAACCAGATC +
Preference number: 1 (lower is better)
Translates to: VITDGPISSSRMKPR*IGEEAGDNAPQNQI
Trigger: GATCTGGTTCTGAGGTGCATTGTCTCCGGCTTCTTCGCCAATGCAGCGAGGTTTCATTCTACTGGAGCTTATAGGACCATCCGTGATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR CCA 90 bp GGGCCTGGTTGCAAAGCAGACACACAACACATGACCGACATGAAGTaGAACCTGAGGACATTGTCAATTCCTAGTGCTTTCAGCTGCAGG +
Preference number: 1 (lower is better)
Translates to: GPGCKADTQHMTDMK*NLRTLSIPSAFSCR
Trigger: CCTGCAGCTGAAAGCACTAGGAATTGACAATGTCCTCAGGTTCCACTTCATGTCGGTCATGTGTTGTGTGTCTGCTTTGCAACCAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652169.1
3UTR GCA 90 bp TGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGAGACATaGTTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGCTG +
Preference number: 1 (lower is better)
Translates to: WFRQRSPMFRSFVET*LFTPGSRPHWLTQL
Trigger: CAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR CCA 90 bp TTTCAAACACTTTCATTTGCTCAAAGGAAGGCAGTCCTGCATACATaGGGAGAACTCGGAGGTGTCTCTTCATCCCAGTGCGAGCTAGTG +
Preference number: 1 (lower is better)
Translates to: FQTLSFAQRKAVLHT*GELGGVSSSQCELV
Trigger: CACTAGCTCGCACTGGGATGAAGAGACACCTCCGAGTTCTCCCCATGTATGCAGGACTGCCTTCCTTTGAGCAAATGAAAGTGTTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR GCA 90 bp ATGAAGTGGAACCTGAGGACATTGTCAATTCCTAGTGCTTTCAGCTaGAGGATGACAGGTGCCAAATTACTACGCTGCATCTCAGGAACC +
Preference number: 1 (lower is better)
Translates to: MKWNLRTLSIPSAFS*RMTGAKLLRCISGT
Trigger: GGTTCCTGAGATGCAGCGTAGTAATTTGGCACCTGTCATCCTGCAGCTGAAAGCACTAGGAATTGACAATGTCCTCAGGTTCCACTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR TCA 90 bp GTAAGGATCACACATGTATCCCTTGCTGGATCACTGGTTTCATTTTaGTTAAAGAAATCCCGGAATTTGTCTGCATCCAGAGTGGCTGAA +
Preference number: 1 (lower is better)
Translates to: VRITHVSLAGSLVSF*LKKSRNLSASRVAE
Trigger: TTCAGCCACTCTGGATGCAGACAAATTCCGGGATTTCTTTAATCAAAATGAAACCAGTGATCCAGCAAGGGATACATGTGTGATCCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR GCA 90 bp CGGAAATGTTCTCCCTTCCACTGTAAGGATCACACATGTATCCCTTaGTGGATCACTGGTTTCATTTTGATTAAAGAAATCCCGGAATTT +
Preference number: 1 (lower is better)
Translates to: RKCSPFHCKDHTCIP*WITGFILIKEIPEF
Trigger: AAATTCCGGGATTTCTTTAATCAAAATGAAACCAGTGATCCAGCAAGGGATACATGTGTGATCCTTACAGTGGAAGGGAGAACATTTCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR CCA 90 bp AAATGTTCTCCCTTCCACTGTAAGGATCACACATGTATCCCTTGCTaGATCACTGGTTTCATTTTGATTAAAGAAATCCCGGAATTTGTC +
Preference number: 1 (lower is better)
Translates to: KCSPFHCKDHTCIPC*ITGFILIKEIPEFV
Trigger: GACAAATTCCGGGATTTCTTTAATCAAAATGAAACCAGTGATCCAGCAAGGGATACATGTGTGATCCTTACAGTGGAAGGGAGAACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp CCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCACCAGCTCACCCCACCTaGGACCAGGGGCAGCAGCAT +
Preference number: 2 (lower is better)
Translates to: PLCPLQHRRMPAHAQSPPPAHPT*DQGQQH
Trigger: ATGCTGCTGCCCCTGGTCCCAGGTGGGGTGAGCTGG...TGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp CCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGACGCCAGCAGTCCCTaGAGCTGTAGCTGTGGGCTC +
Preference number: 2 (lower is better)
Translates to: PLCPLQHRRMPAHAQSPPDASSP*SCSCGL
Trigger: GAGCCCACAGCTACAGCTGCAGGGACTGCTGGCGTC...TGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp TCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCTTCCACAGGAGCTGGTaGCAGCTCACCCCACCTGGG +
Preference number: 2 (lower is better)
Translates to: SHSARCSTEGCLPMHKVLFHRSW*QLTPPG
Trigger: CCCAGGTGGGGTGAGCTGGCACCAGCTCCTGTGGAA...GAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp TTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGACGCCAGCAGTCCCTaGAGCTGTAGCTGTGGGCTC +
Preference number: 2 (lower is better)
Translates to: LVSVLSEPTPTLPAAAQKDASSP*SCSCGL
Trigger: GAGCCCACAGCTACAGCTGCAGGGACTGCTGGCGTC...CTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp CCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCTGGCCAGCTGGTCGGTaGAGTCATCAAAGCGGATGC +
Preference number: 2 (lower is better)
Translates to: PTLPAAAQKDACPCTKSSWPAGR*SHQSGC
Trigger: GCATCCGCTTTGATGACTGCACCGACCAGCTGGCCA...GGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp GAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAACCAGCTCACCCCACCTaGGACCAGGGGCAGCAGCAT +
Preference number: 2 (lower is better)
Translates to: ETLCPSDMPFGGFGRDPQPAHPT*DQGQQH
Trigger: ATGCTGCTGCCCCTGGTCCCAGGTGGGGTGAGCTGG...TTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp CTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCGACGCCAGCAGTCCCTaGAGCTGTAGCTGTGGGCTC +
Preference number: 2 (lower is better)
Translates to: LPMHKVLQDPSKDANAVGDASSP*SCSCGL
Trigger: GAGCCCACAGCTACAGCTGCAGGGACTGCTGGCGTC...GCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp CATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGACGCCAGCAGTCCCTaGAGCTGTAGCTGTGGGCTC +
Preference number: 2 (lower is better)
Translates to: HAQSPPGSQQGCKCCGQRDASSP*SCSCGL
Trigger: GAGCCCACAGCTACAGCTGCAGGGACTGCTGGCGTC...CCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp GAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATTCCACAGGAGCTGGTaGCAGCTCACCCCACCTGGG +
Preference number: 2 (lower is better)
Translates to: ETLCPSDMPFGGFGRDPQFHRSW*QLTPPG
Trigger: CCCAGGTGGGGTGAGCTGGCACCAGCTCCTGTGGAA...TTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp GTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGGATCCCAGCAAGGATaGAAATGCTGTGGGCAGCGG +
Preference number: 2 (lower is better)
Translates to: VSVLSEPTPTLPAAAQKDGSQQG*KCCGQR
Trigger: CCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCC...ATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp GGATCTGAGCTGATGAACTCTCCTGAGTGCTCAGCTAGCGTGGCACCAGGACCTGAGCTGGGCCAGGACTaGATGCCTGCTGGAAGTGGC +
Preference number: 2 (lower is better)
Translates to: GSELMNSPECSASVAPGPELGQD*MPAGSG
Trigger: GCCACTTCCAGCAGGCATGCAGTCCTGGCCCAGCTC...AGGTCCTGGTGCCACGCTAGCTGAGCACTCAGGAGAGTTCATCAGCTCAGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp GATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGCCAGCTCACCCCACCTaGGACCAGGGGCAGCAGCAT +
Preference number: 2 (lower is better)
Translates to: DACPCTKSSRIPARMQMLPAHPT*DQGQQH
Trigger: ATGCTGCTGCCCCTGGTCCCAGGTGGGGTGAGCTGG...CAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp GTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATACATTCCACAGGAGCTaGTGCCAGCTCACCCCACCT +
Preference number: 2 (lower is better)
Translates to: VSVLSEPTPTLPAAAQKDTFHRS*CQLTPP
Trigger: AGGTGGGGTGAGCTGGCACCAGCTCCTGTGGAATGT...ATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp GAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAAAGCCAACTCCCACTCTaGCCGCTGCAGCACAGAAGG +
Preference number: 2 (lower is better)
Translates to: ETLCPSDMPFGGFGRDPQSQLPL*PLQHRR
Trigger: CCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCT...TTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp ACACCTGGCAGCAGACCTCATTGGTTAACACAGCTGTGGCCCCAGCAGGGAAAGAGCCAACTCCCACTCTaGCCGCTGCAGCACAGAAGG +
Preference number: 2 (lower is better)
Translates to: TPGSRPHWLTQLWPQQGKSQLPL*PLQHRR
Trigger: CCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCT...CTTTCCCTGCTGGGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp AAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCACATTCCACAGGAGCTaGTGCCAGCTCACCCCACCT +
Preference number: 2 (lower is better)
Translates to: KWHAGLVSVLSEPTPTLPTFHRS*CQLTPP
Trigger: AGGTGGGGTGAGCTGGCACCAGCTCCTGTGGAATGT...GGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR TCA 90 bp AAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCCAAGAGTGAGCGTGCTGAGTaGGCCAACTCCCACTCTGCC +
Preference number: 2 (lower is better)
Translates to: KTSACWKNCPHALLQEPKSERAE*ANSHSA
Trigger: GGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACT...CTTGGGTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR TCA 90 bp ACACCTGGCAGCAGACCTCATTGGTTAACACAGCTGTGGCCCCAGCAGGGAAAGCCTGGCACTACACTCTaGGAGGACGCTAAGCCTACC +
Preference number: 2 (lower is better)
Translates to: TPGSRPHWLTQLWPQQGKPGTTL*EDAKPT
Trigger: GGTAGGCTTAGCGTCCTCTCAGAGTGTAGTGCCAGG...CTTTCCCTGCTGGGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp ATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTTTCCACAGGAGCTGGTaGCAGCTCACCCCACCTGGG +
Preference number: 2 (lower is better)
Translates to: MPAHAQSPPGSQQGCKCCFHRSW*QLTPPG
Trigger: CCCAGGTGGGGTGAGCTGGCACCAGCTCCTGTGGAA...ACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp CTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCAGCAAGGATGCAAATaGTGTGGGCAGCGGGAAGAA +
Preference number: 2 (lower is better)
Translates to: LPLCPLQHRRMPAHAQSPQQGCK*CGQREE
Trigger: TTCTTCCCGCTGCCCACAGCATTTGCATCCTTGCTG...AGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp AAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCCAAGTCCCACTCTGCCCGCTaGAGCACAGAAGGATGCCTG +
Preference number: 2 (lower is better)
Translates to: KTSACWKNCPHALLQEPKSHSAR*STEGCL
Trigger: CAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGA...CTTGGGTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp TGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGATGGCCAGCTGGTCGGTaGAGTCATCAAAGCGGATGC +
Preference number: 2 (lower is better)
Translates to: CTKSSRIPARMQMLWAAGWPAGR*SHQSGC
Trigger: GCATCCGCTTTGATGACTGCACCGACCAGCTGGCCA...TCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp TTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGCAGCAAGGATGCAAATaGTGTGGGCAGCGGGAAGAA +
Preference number: 2 (lower is better)
Translates to: LVSVLSEPTPTLPAAAQKQQGCK*CGQREE
Trigger: TTCTTCCCGCTGCCCACAGCATTTGCATCCTTGCTG...CTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp TGGGAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAGCAAGGATGCAAATaGTGTGGGCAGCGGGAAGAA +
Preference number: 2 (lower is better)
Translates to: WETLCPSDMPFGGFGRDPQQGCK*CGQREE
Trigger: TTCTTCCCGCTGCCCACAGCATTTGCATCCTTGCTG...GGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp GGCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAAGGATCCCAGCAAGGATaGAAATGCTGTGGGCAGCGG +
Preference number: 2 (lower is better)
Translates to: GNKTSACWKNCPHALLQEGSQQG*KCCGQR
Trigger: CCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCC...TTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp GAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAAGCACAGAAGGATGCCTaGCCATGCACAAAGTCCTCC +
Preference number: 2 (lower is better)
Translates to: ETLCPSDMPFGGFGRDPQAQKDA*PCTKSS
Trigger: GGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGC...TTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp TGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGAGCCAACTCCCACTCTaGCCGCTGCAGCACAGAAGG +
Preference number: 2 (lower is better)
Translates to: CAHQTCPLVVSAEIPNVSSQLPL*PLQHRR
Trigger: CCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCT...CGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp TGGGAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCATGAACTCTCCTGAGTaGTCAGCTAGCGTGGCACCA +
Preference number: 2 (lower is better)
Translates to: WETLCPSDMPFGGFGRDPMNSPE*SASVAP
Trigger: TGGTGCCACGCTAGCTGAGCACTCAGGAGAGTTCAT...GGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp TGGGAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCGTCCCCACGCGCTCTTaGAAGAACCCAAGCAAACAA +
Preference number: 2 (lower is better)
Translates to: WETLCPSDMPFGGFGRDPVPTRS*KNPSKQ
Trigger: TTGTTTGCTTGGGTTCTTGCAAGAGCGCGTGGGGAC...GGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp TCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGCCAGCTCACCCCACCTaGGACCAGGGGCAGCAGCAT +
Preference number: 2 (lower is better)
Translates to: SDMPFGGFGRDPQCFVHSPAHPT*DQGQQH
Trigger: ATGCTGCTGCCCCTGGTCCCAGGTGGGGTGAGCTGG...CGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp GATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGACATTCCACAGGAGCTaGTGCCAGCTCACCCCACCT +
Preference number: 2 (lower is better)
Translates to: DACPCTKSSRIPARMQMLTFHRS*CQLTPP
Trigger: AGGTGGGGTGAGCTGGCACCAGCTCCTGTGGAATGT...CAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp CAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCAGTGCTCAGCTAGCGTaGCACCAGGACCTGGCACTA +
Preference number: 2 (lower is better)
Translates to: QQNQCLLEELSPRALARTSAQLA*HQDLAL
Trigger: TAGTGCCAGGTCCTGGTGCCACGCTAGCTGAGCACT...GGTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp GTTTCCCATAGAGCTGGGCCAGGACTGCATGCCTGCTGGAAGTGGCATGCTGGGTACAAGGTCCTCTCGTaGGCTTCATCCAGCATGATG +
Preference number: 2 (lower is better)
Translates to: VSHRAGPGLHACWKWHAGYKVLS*ASSSMM
Trigger: CATCATGCTGGATGAAGCCCACGAGAGGACCTTGTA...CCCAGCATGCCACTTCCAGCAGGCATGCAGTCCTGGCCCAGCTCTATGGGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp ACACCTGGCAGCAGACCTCATTGGTTAACACAGCTGTGGCCCCAGCAGGGAAAGGGACCTTGGCCCTTTTaGCTTTCAGAGACAGGTGCG +
Preference number: 2 (lower is better)
Translates to: TPGSRPHWLTQLWPQQGKGPWPF*LSETGA
Trigger: CGCACCTGTCTCTGAAAGCCAAAAGGGCCAAGGTCC...CTTTCCCTGCTGGGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp TCTGTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTTCCACAGGAGCTGGTaGCAGCTCACCCCACCTGGG +
Preference number: 2 (lower is better)
Translates to: SVHPTWCFGLQWLTFLLVFHRSW*QLTPPG
Trigger: CCCAGGTGGGGTGAGCTGGCACCAGCTCCTGTGGAA...AACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp AATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGCTGAGCCAACTCCCACTCTaGCCGCTGCAGCACAGAAGG +
Preference number: 2 (lower is better)
Translates to: NHQSLASLLAADKQGQGLSQLPL*PLQHRR
Trigger: CCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCT...CAGCCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp GTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCCAGGACTGCATGCCTaGTGGAAGTGGCATGCTGGG +
Preference number: 2 (lower is better)
Translates to: VHPTWCFGLQWLTFLLVSPGLHA*WKWHAG
Trigger: CCCAGCATGCCACTTCCAGCAGGCATGCAGTCCTGG...GGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp GAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAAGTCCCCACGCGCTCTTaGAAGAACCCAAGCAAACAA +
Preference number: 2 (lower is better)
Translates to: ETLCPSDMPFGGFGRDPQVPTRS*KNPSKQ
Trigger: TTGTTTGCTTGGGTTCTTGCAAGAGCGCGTGGGGAC...TTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp GAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAAGGGCAACAAAACCAGTaGCTGCTGGAAGAACTGTCC +
Preference number: 2 (lower is better)
Translates to: ETLCPSDMPFGGFGRDPQGQQNQ*LLEELS
Trigger: GGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGCCC...TTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp ACCATCGACTGTGCTGGAGGGGGCGACATGAAGTGGAACCTGAGGACATTGTCAGCTAGTGCTCGAGCCTaGTCGATGAGCATCGACACA +
Preference number: 2 (lower is better)
Translates to: TIDCAGGGDMKWNLRTLSASARA*SMSIDT
Trigger: TGTGTCGATGCTCATCGAGCAGGCTCGAGCACTAGC...TGACAATGTCCTCAGGTTCCACTTCATGTCGCCCCCTCCAGCACAGTCGATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484417.5
3UTR-3UTR CCA 90 bp CTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGAGACATGCCCAGCTCACCCCACCTaGGACCAGGGGCAGCAGCAT +
Preference number: 2 (lower is better)
Translates to: LWWFRQRSPMFRSFVETCPAHPT*DQGQQH
Trigger: ATGCTGCTGCCCCTGGTCCCAGGTGGGGTGAGCTGG...GCATGTCTCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp CAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGCATGCCGGCAGCAGACCTCATTaGTTAACACAGCTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: QWLTFLLVSHRAGPGLHAGSRPH*LTQLWP
Trigger: GGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCC...GGCATGCAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR TCA 90 bp TGGGAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCTGCATCCAGAGTGGCTaGAGCTACAATCAATCGAAG +
Preference number: 2 (lower is better)
Translates to: WETLCPSDMPFGGFGRDPCIQSG*SYNQSK
Trigger: CTTCGATTGATTGTAGCTTCAGCCACTCTGGATGCA...GGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR TCA 90 bp GGATCTGAGCTGATGAACTCTCCTGAGTGCTCAGCTAGCGTGGCACCAGGACCTCCACTATCACCTTTCTaGCACTGCGTGACACCCTTT +
Preference number: 2 (lower is better)
Translates to: GSELMNSPECSASVAPGPPLSPF*HCVTPF
Trigger: AAAGGGTGTCACGCAGTGTCAGAAAGGTGATAGTGG...AGGTCCTGGTGCCACGCTAGCTGAGCACTCAGGAGAGTTCATCAGCTCAGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp CCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGACGCCAGCAGTCCCTaGAGCTGTAGCTGTGGGCTC +
Preference number: 2 (lower is better)
Translates to: PTWCFGLQWLTFLLVSHRDASSP*SCSCGL
Trigger: GAGCCCACAGCTACAGCTGCAGGGACTGCTGGCGTC...TCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp AAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCCAAGCAGCAAGGATGCAAATaGTGTGGGCAGCGGGAAGAA +
Preference number: 2 (lower is better)
Translates to: KTSACWKNCPHALLQEPKQQGCK*CGQREE
Trigger: TTCTTCCCGCTGCCCACAGCATTTGCATCCTTGCTG...CTTGGGTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp TCTGTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTGGGCCAGGACTGCATaGCTGCTGGAAGTGGCATGC +
Preference number: 2 (lower is better)
Translates to: SVHPTWCFGLQWLTFLLVWARTA*LLEVAC
Trigger: GCATGCCACTTCCAGCAGGCATGCAGTCCTGGCCCA...AACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp TATATTGAGCATAGTGAGGTGGTCGCCCTCCTCCACAGCAAATTTACGGTGCACTGGGCCAGGACTGCATaGCTGCTGGAAGTGGCATGC +
Preference number: 2 (lower is better)
Translates to: YIEHSEVVALLHSKFTVHWARTA*LLEVAC
Trigger: GCATGCCACTTCCAGCAGGCATGCAGTCCTGGCCCA...GTGCACCGTAAATTTGCTGTGGAGGAGGGCGACCACCTCACTATGCTCAATATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp TTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGGAGCTGGGCCAGGACTaGATGCCTGCTGGAAGTGGC +
Preference number: 2 (lower is better)
Translates to: FVETCLFTPGSRPHWLTQELGQD*MPAGSG
Trigger: GCCACTTCCAGCAGGCATGCAGTCCTGGCCCAGCTC...CTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp GCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAACCTAGTGCTTTCAGCTaGAGGATGACAGGTGCCAAA +
Preference number: 2 (lower is better)
Translates to: AQSPPGSQQGCKCCGQREPSAFS*RMTGAK
Trigger: TTTGGCACCTGTCATCCTGCAGCTGAAAGCACTAGG...TTCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp GCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAAAGAATGAAACCTCGCTaGATTGGCGAAGAAGCCGGA +
Preference number: 2 (lower is better)
Translates to: AQSPPGSQQGCKCCGQRERMKPR*IGEEAG
Trigger: TCCGGCTTCTTCGCCAATGCAGCGAGGTTTCATTCT...TTCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp GGCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAATCTGTCCACCCCACATaGTGTTTTGGCCTTCAGTGG +
Preference number: 2 (lower is better)
Translates to: GNKTSACWKNCPHALLQESVHPT*CFGLQW
Trigger: CCACTGAAGGCCAAAACACCATGTGGGGTGGACAGA...TTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp AAAAGTGTGGAGCCAGCTCCAACAGCCAGGCCGATTCAATGGCAGTCACATCTCGGCAGCAGACCTCATTaGTTAACACAGCTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: KSVEPAPTARPIQWQSHLGSRPH*LTQLWP
Trigger: GGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCC...GAGATGTGACTGCCATTGAATCGGCCTGGCTGTTGGAGCTGGCTCCACACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp GGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGAGACATGCCCTTTGGTaGTTTCGGCAGAGATCCCCA +
Preference number: 2 (lower is better)
Translates to: GLQWLTFLLVSHRAGPGLRHALW*FRQRSP
Trigger: TGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCT...CAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp GCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCCCTTGCAAGTCTCCTaGCTGCAGATAAACAGGGAC +
Preference number: 2 (lower is better)
Translates to: ATKPVPAGRTVPTRSCKNPLQVS*LQINRD
Trigger: GTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGG...GTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp CAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGCATGCCATTCTCGTGGCCAGCTaGTCGGTGCAGTCATCAAAG +
Preference number: 2 (lower is better)
Translates to: QWLTFLLVSHRAGPGLHAILVAS*SVQSSK
Trigger: CTTTGATGACTGCACCGACCAGCTGGCCACGAGAAT...GGCATGCAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR CAA 90 bp GAAGCCACTGGGTTTGGGAGACCCTGTGCCCATCAGACATGCCCTTaGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGA +
Preference number: 2 (lower is better)
Translates to: EATGFGRPCAHQTCP*VVSAEIPNVSFIRR
Trigger: TCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTCCCAAACCCAGTGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR TCA 90 bp CAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCCCACTATCACCTTTCTaGCACTGCGTGACACCCTTT +
Preference number: 2 (lower is better)
Translates to: QQNQCLLEELSPRALARTPLSPF*HCVTPF
Trigger: AAAGGGTGTCACGCAGTGTCAGAAAGGTGATAGTGG...GGTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR TCA 90 bp GGCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAATCAGGAACCGTAGACTaGGGCAACTTGTCAAAGGCT +
Preference number: 2 (lower is better)
Translates to: GNKTSACWKNCPHALLQESGTVD*GNLSKA
Trigger: AGCCTTTGACAAGTTGCCTCAGTCTACGGTTCCTGA...TTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR TCA 90 bp ACACCTGGCAGCAGACCTCATTGGTTAACACAGCTGTGGCCCCAGCAGGGAAAGCTTTCAGCTGCAGGATaGCAGGTGCCAAATTACTAC +
Preference number: 2 (lower is better)
Translates to: TPGSRPHWLTQLWPQQGKLSAAG*QVPNYY
Trigger: GTAGTAATTTGGCACCTGTCATCCTGCAGCTGAAAG...CTTTCCCTGCTGGGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp TTCATTTGCTCAAAGGAAGGCAGTCCTGCATACATGGGGAGAACTCGGAGGTGTGGATCCCAGCAAGGATaGAAATGCTGTGGGCAGCGG +
Preference number: 2 (lower is better)
Translates to: FICSKEGSPAYMGRTRRCGSQQG*KCCGQR
Trigger: CCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCC...ACACCTCCGAGTTCTCCCCATGTATGCAGGACTGCCTTCCTTTGAGCAAATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp CAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGCATGCCCAATCACCAATCCCTTaGAAGTCTCCTGGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: QWLTFLLVSHRAGPGLHAQSPIP*KSPGCR
Trigger: TCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTG...GGCATGCAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp AATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGCTGGCTAGTGCTCGAGCCTaGTCGATGAGCATCGACACA +
Preference number: 2 (lower is better)
Translates to: NHQSLASLLAADKQGQGLASARA*SMSIDT
Trigger: TGTGTCGATGCTCATCGAGCAGGCTCGAGCACTAGC...CAGCCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp TCTGTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTACATTCCACAGGAGCTaGTGCCAGCTCACCCCACCT +
Preference number: 2 (lower is better)
Translates to: SVHPTWCFGLQWLTFLLVTFHRS*CQLTPP
Trigger: AGGTGGGGTGAGCTGGCACCAGCTCCTGTGGAATGT...AACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp GTCAATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGCTGGAAGTGGCATGCTaGGTTAGTGAGCGTGCTGAG +
Preference number: 2 (lower is better)
Translates to: VNHQSLASLLAADKQGQGLEVAC*VSERAE
Trigger: CTCAGCACGCTCACTAACCCAGCATGCCACTTCCAG...CCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp TCAATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGCCTGGAAGTGGCATGCTaGGTTAGTGAGCGTGCTGAG +
Preference number: 2 (lower is better)
Translates to: SITNPLQVSWLQINRDKGLEVAC*VSERAE
Trigger: CTCAGCACGCTCACTAACCCAGCATGCCACTTCCAG...GCCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp AATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGCTGGGACTGCATGCCTGCTaGAAGTGGCATGCTGGGTTA +
Preference number: 2 (lower is better)
Translates to: NHQSLASLLAADKQGQGLGLHAC*KWHAGL
Trigger: TAACCCAGCATGCCACTTCCAGCAGGCATGCAGTCC...CAGCCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp CAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCTACAAGGTCCTCTCGTaGGCTTCATCCAGCATGATG +
Preference number: 2 (lower is better)
Translates to: QQNQCLLEELSPRALARTYKVLS*ASSSMM
Trigger: CATCATGCTGGATGAAGCCCACGAGAGGACCTTGTA...GGTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp GGCTTCCTCTGTATAAAGGCGATAACATTTTCCCGAGCGACTACGACCACCACGGCAGTCCTGCATACATaGGGAGAACTCGGAGGTGTC +
Preference number: 2 (lower is better)
Translates to: GFLCIKAITFSRATTTTTAVLHT*GELGGV
Trigger: GACACCTCCGAGTTCTCCCCATGTATGCAGGACTGC...CGTGGTGGTCGTAGTCGCTCGGGAAAATGTTATCGCCTTTATACAGAGGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR CAA 90 bp ATCGACTGTGCTGGAGGGGGCGACATGAAGTGGAACCTGAGGACATaGTCAATTCCTAGTGCTTTCAGCTGCAGGATGACAGGTGCCAAA +
Preference number: 2 (lower is better)
Translates to: IDCAGGGDMKWNLRT*SIPSAFSCRMTGAK
Trigger: TTTGGCACCTGTCATCCTGCAGCTGAAAGCACTAGGAATTGACAATGTCCTCAGGTTCCACTTCATGTCGCCCCCTCCAGCACAGTCGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484417.5
3UTR-3UTR TCA 90 bp ACACCTGGCAGCAGACCTCATTGGTTAACACAGCTGTGGCCCCAGCAGGGAAAGTTACAGTCGCAGCTCTaGCAAGACCCTTGTAATTCA +
Preference number: 2 (lower is better)
Translates to: TPGSRPHWLTQLWPQQGKLQSQL*QDPCNS
Trigger: TGAATTACAAGGGTCTTGTCAGAGCTGCGACTGTAA...CTTTCCCTGCTGGGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp TTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGACATTCCACAGGAGCTaGTGCCAGCTCACCCCACCT +
Preference number: 2 (lower is better)
Translates to: FVETCLFTPGSRPHWLTQTFHRS*CQLTPP
Trigger: AGGTGGGGTGAGCTGGCACCAGCTCCTGTGGAATGT...CTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp TATATTGAGCATAGTGAGGTGGTCGCCCTCCTCCACAGCAAATTTACGGTGCACGGCAGCAGACCTCATTaGTTAACACAGCTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: YIEHSEVVALLHSKFTVHGSRPH*LTQLWP
Trigger: GGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCC...GTGCACCGTAAATTTGCTGTGGAGGAGGGCGACCACCTCACTATGCTCAATATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp TCAATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGCAGACATGCCCTTTGGTaGTTTCGGCAGAGATCCCCA +
Preference number: 2 (lower is better)
Translates to: SITNPLQVSWLQINRDKGRHALW*FRQRSP
Trigger: TGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCT...GCCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp AAAAGTGTGGAGCCAGCTCCAACAGCCAGGCCGATTCAATGGCAGTCACATCTCATCAGACATGCCCTTTaGTGGTTTCGGCAGAGATCC +
Preference number: 2 (lower is better)
Translates to: KSVEPAPTARPIQWQSHLIRHAL*WFRQRS
Trigger: GGATCTCTGCCGAAACCACCAAAGGGCATGTCTGAT...GAGATGTGACTGCCATTGAATCGGCCTGGCTGTTGGAGCTGGCTCCACACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp TTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGCGTGGCACCAGGACCTaGCACTACACTCTGAGAGGA +
Preference number: 2 (lower is better)
Translates to: FVETCLFTPGSRPHWLTQRGTRT*HYTLRG
Trigger: TCCTCTCAGAGTGTAGTGCCAGGTCCTGGTGCCACG...CTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp GCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAATGTCTGCATCCAGAGTaGCTGAAGCTACAATCAATC +
Preference number: 2 (lower is better)
Translates to: AQSPPGSQQGCKCCGQRECLHPE*LKLQSI
Trigger: GATTGATTGTAGCTTCAGCCACTCTGGATGCAGACA...TTCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp GCACTACACTCTGAGAGGACGCTAAGCCTACCTGTGAAACACAAATCCTCTGCTGCAGTCCTGCATACATaGGGAGAACTCGGAGGTGTC +
Preference number: 2 (lower is better)
Translates to: ALHSERTLSLPVKHKSSAAVLHT*GELGGV
Trigger: GACACCTCCGAGTTCTCCCCATGTATGCAGGACTGC...AGCAGAGGATTTGTGTTTCACAGGTAGGCTTAGCGTCCTCTCAGAGTGTAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp GCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACTGTATGTGCAGCTCATaGTCATCACGGATGGTCCTA +
Preference number: 2 (lower is better)
Translates to: ATKPVPAGRTVPTRSCKNCMCSS*SSRMVL
Trigger: TAGGACCATCCGTGATGACCATGAGCTGCACATACA...GTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR TCA 90 bp GGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGGCATCCAAACTGTTGTaGATTCCTGCTAAAGAGGAG +
Preference number: 2 (lower is better)
Translates to: GLQWLTFLLVSHRAGPGLASKLL*IPAKEE
Trigger: CTCCTCTTTAGCAGGAATTCACAACAGTTTGGATGC...CAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR TCA 90 bp TCCAGTAGAATGAAACCTCGCTGCATTGGCGAAGAAGCCGGAGACAATGCACCTAGTAACTCCAAGGCTTaGACCATCGACTGTGCTGGA +
Preference number: 2 (lower is better)
Translates to: SSRMKPRCIGEEAGDNAPSNSKA*TIDCAG
Trigger: TCCAGCACAGTCGATGGTTCAAGCCTTGGAGTTACT...AGGTGCATTGTCTCCGGCTTCTTCGCCAATGCAGCGAGGTTTCATTCTACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp TTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGCTGCTGGAAGTGGCATaGTGGGTTAGTGAGCGTGCT +
Preference number: 2 (lower is better)
Translates to: FVETCLFTPGSRPHWLTQLLEVA*WVSERA
Trigger: AGCACGCTCACTAACCCAGCATGCCACTTCCAGCAG...CTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp TCCAGTAGAATGAAACCTCGCTGCATTGGCGAAGAAGCCGGAGACAATGCACCTAACAAAACCAGTGCCTaGTGGAAGAACTGTCCCCAC +
Preference number: 2 (lower is better)
Translates to: SSRMKPRCIGEEAGDNAPNKTSA*WKNCPH
Trigger: GTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTT...AGGTGCATTGTCTCCGGCTTCTTCGCCAATGCAGCGAGGTTTCATTCTACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp GAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAACACACATGTATCCCTTaGTGGATCACTGGTTTCATT +
Preference number: 2 (lower is better)
Translates to: ETLCPSDMPFGGFGRDPQHTCIP*WITGFI
Trigger: AATGAAACCAGTGATCCAGCAAGGGATACATGTGTG...TTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp CTGCATCTGGCATGTGTTGAAATGCAATCATCATCACAGCAAAGCAGCCCTGGGTTGAACCATCGACTGTaGTGGAGGGGGCGACATGAA +
Preference number: 2 (lower is better)
Translates to: LHLACVEMQSSSQQSSPGLNHRL*WRGRHE
Trigger: TTCATGTCGCCCCCTCCAGCACAGTCGATGGTTCAA...CCCAGGGCTGCTTTGCTGTGATGATGATTGCATTTCAACACATGCCAGATGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484417.5
3UTR-3UTR GCA 90 bp GCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAAAAGATATTCTGGATCTaGATCATGGCAGCGATGCTT +
Preference number: 2 (lower is better)
Translates to: AQSPPGSQQGCKCCGQREKIFWI*IMAAML
Trigger: AAGCATCGCTGCCATGATGCAGATCCAGAATATCTT...TTCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp AAAAGTGTGGAGCCAGCTCCAACAGCCAGGCCGATTCAATGGCAGTCACATCTCCCCCACATGGTGTTTTaGCCTTCAGTGGCTAACTTT +
Preference number: 2 (lower is better)
Translates to: KSVEPAPTARPIQWQSHLPHMVF*PSVANF
Trigger: AAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGG...GAGATGTGACTGCCATTGAATCGGCCTGGCTGTTGGAGCTGGCTCCACACTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp ATGCCGCTGATTGTGATAGAGGTTTCTGCCACATTGGTGGCCACTATCACCTTTACAGACAGAAGCCACTaGGTTTGGGAGACCCTGTGC +
Preference number: 2 (lower is better)
Translates to: MPLIVIEVSATLVATITFTDRSH*VWETLC
Trigger: GCACAGGGTCTCCCAAACCCAGTGGCTTCTGTCTGT...AAAGGTGATAGTGGCCACCAATGTGGCAGAAACCTCTATCACAATCAGCGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp GAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAAAATGACATACACGTTTaGTGCCAAAAGTGGCACATC +
Preference number: 2 (lower is better)
Translates to: ETLCPSDMPFGGFGRDPQNDIHV*CQKWHI
Trigger: GATGTGCCACTTTTGGCACCAAACGTGTATGTCATT...TTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp TTCATTTGCTCAAAGGAAGGCAGTCCTGCATACATGGGGAGAACTCGGAGGTGTATTCTCGTGGCCAGCTaGTCGGTGCAGTCATCAAAG +
Preference number: 2 (lower is better)
Translates to: FICSKEGSPAYMGRTRRCILVAS*SVQSSK
Trigger: CTTTGATGACTGCACCGACCAGCTGGCCACGAGAAT...ACACCTCCGAGTTCTCCCCATGTATGCAGGACTGCCTTCCTTTGAGCAAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp TTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGCTGTGGCCCCAGCAGTGTCTGCATCCAGAGTaGCTGAAGCTACAATCAATC +
Preference number: 2 (lower is better)
Translates to: LFTPGSRPHWLTQLWPQQCLHPE*LKLQSI
Trigger: GATTGATTGTAGCTTCAGCCACTCTGGATGCAGACA...CTGCTGGGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp GGCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAAACCACAAAGATATTCTaGATCTGCATCATGGCAGCG +
Preference number: 2 (lower is better)
Translates to: GNKTSACWKNCPHALLQETTKIF*ICIMAA
Trigger: CGCTGCCATGATGCAGATCCAGAATATCTTTGTGGT...TTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp GGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGGTGAGACTTCTGGTTTaGGGGGACCACAAAGATATT +
Preference number: 2 (lower is better)
Translates to: GLQWLTFLLVSHRAGPGLVRLLV*GDHKDI
Trigger: AATATCTTTGTGGTCCCCCCAAACCAGAAGTCTCAC...CAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp GGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGTTGTTGATAAAAGTGTaGAGCCAGCTCCAACAGCCA +
Preference number: 2 (lower is better)
Translates to: GLQWLTFLLVSHRAGPGLLLIKV*SQLQQP
Trigger: TGGCTGTTGGAGCTGGCTCCACACTTTTATCAACAA...CAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR TCA 90 bp GTGATGTTCCTGAGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGCCTGGCACTACACTCTaGGAGGACGCTAAGCCTACC +
Preference number: 2 (lower is better)
Translates to: VMFLSYRSLGHPNCCEFLPGTTL*EDAKPT
Trigger: GGTAGGCTTAGCGTCCTCTCAGAGTGTAGTGCCAGG...CAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCTCAGGAACATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp ATGCCGCTGATTGTGATAGAGGTTTCTGCCACATTGGTGGCCACTATCACCTTTCAGCAAGGATGCAAATaGTGTGGGCAGCGGGAAGAA +
Preference number: 2 (lower is better)
Translates to: MPLIVIEVSATLVATITFQQGCK*CGQREE
Trigger: TTCTTCCCGCTGCCCACAGCATTTGCATCCTTGCTG...AAAGGTGATAGTGGCCACCAATGTGGCAGAAACCTCTATCACAATCAGCGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp GACCTTGGCCCTTTTGGCTTTCAGAGACAGGTGCGTTCCTTGTTGATAAAAGTGTGCAGCACAGAAGGATaGCTGCCCATGCACAAAGTC +
Preference number: 2 (lower is better)
Translates to: DLGPFGFQRQVRSLLIKVCSTEG*LPMHKV
Trigger: GACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCA...CACTTTTATCAACAAGGAACGCACCTGTCTCTGAAAGCCAAAAGGGCCAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp TTCCTGAGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGCTAAAGTCCCACTCTGCCCGCTaGAGCACAGAAGGATGCCTG +
Preference number: 2 (lower is better)
Translates to: FLSYRSLGHPNCCEFLLKSHSAR*STEGCL
Trigger: CAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGA...CTTTAGCAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCTCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp TTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGATGAACTCTCCTGAGTaGTCAGCTAGCGTGGCACCA +
Preference number: 2 (lower is better)
Translates to: FVETCLFTPGSRPHWLTQMNSPE*SASVAP
Trigger: TGGTGCCACGCTAGCTGAGCACTCAGGAGAGTTCAT...CTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp TTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGTCTGTCCACCCCACATaGTGTTTTGGCCTTCAGTGG +
Preference number: 2 (lower is better)
Translates to: FVETCLFTPGSRPHWLTQSVHPT*CFGLQW
Trigger: CCACTGAAGGCCAAAACACCATGTGGGGTGGACAGA...CTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp GCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAAGTTTGGTGCCAAAAGTaGCACATCCAAACTAATATC +
Preference number: 2 (lower is better)
Translates to: AQSPPGSQQGCKCCGQREVWCQK*HIQTNI
Trigger: GATATTAGTTTGGATGTGCCACTTTTGGCACCAAAC...TTCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp TTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGGGGGGCGACATGAAGTaGAACCTGAGGACATTGTCA +
Preference number: 2 (lower is better)
Translates to: FVETCLFTPGSRPHWLTQGGDMK*NLRTLS
Trigger: TGACAATGTCCTCAGGTTCCACTTCATGTCGCCCCC...CTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000484417.5
3UTR-3UTR CCA 90 bp GCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACTCTGGATCTGCATCATaGCAGCGATGCTTAGAATTT +
Preference number: 2 (lower is better)
Translates to: ATKPVPAGRTVPTRSCKNSGSAS*QRCLEF
Trigger: AAATTCTAAGCATCGCTGCCATGATGCAGATCCAGA...GTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp CCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGAAACCTCGCTGCATTaGCGAAGAAGCCGGAGACAA +
Preference number: 2 (lower is better)
Translates to: PTWCFGLQWLTFLLVSHRETSLH*RRSRRQ
Trigger: TTGTCTCCGGCTTCTTCGCCAATGCAGCGAGGTTTC...TCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR CAA 90 bp TTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGAGACATGCTaGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGCTGTGG +
Preference number: 2 (lower is better)
Translates to: FRQRSPMFRSFVETC*FTPGSRPHWLTQLW
Trigger: CCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR CAA 90 bp GCAGACACACAACACATGACCGACATGAAGTGGAACCTGAGGACATaGTCAATTCCTAGTGCTTTCAGCTGCAGGATGACAGGTGCCAAA +
Preference number: 2 (lower is better)
Translates to: ADTQHMTDMKWNLRT*SIPSAFSCRMTGAK
Trigger: TTTGGCACCTGTCATCCTGCAGCTGAAAGCACTAGGAATTGACAATGTCCTCAGGTTCCACTTCATGTCGGTCATGTGTTGTGTGTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652169.1
3UTR-3UTR GCA 90 bp GTGATGTTCCTGAGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGGCACAGAAGGATGCCTaGCCATGCACAAAGTCCTCC +
Preference number: 2 (lower is better)
Translates to: VMFLSYRSLGHPNCCEFLAQKDA*PCTKSS
Trigger: GGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGC...CAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCTCAGGAACATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp AGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGCTAAAGAGGAGGCTGCTGGAAGTGGCATaGTGGGTTAGTGAGCGTGCT +
Preference number: 2 (lower is better)
Translates to: SYRSLGHPNCCEFLLKRRLLEVA*WVSERA
Trigger: AGCACGCTCACTAACCCAGCATGCCACTTCCAGCAG...CCTCCTCTTTAGCAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp GCACTACACTCTGAGAGGACGCTAAGCCTACCTGTGAAACACAAATCCTCTGCTTCATTCGTAGAGACATaGTTGTTCACACCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: ALHSERTLSLPVKHKSSASFVET*LFTPGS
Trigger: GCTGCCAGGTGTGAACAAGCATGTCTCTACGAATGA...AGCAGAGGATTTGTGTTTCACAGGTAGGCTTAGCGTCCTCTCAGAGTGTAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp GGCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAAACATGTATCCCTTGCTaGATCACTGGTTTCATTTTG +
Preference number: 2 (lower is better)
Translates to: GNKTSACWKNCPHALLQETCIPC*ITGFIL
Trigger: CAAAATGAAACCAGTGATCCAGCAAGGGATACATGT...TTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR TCA 90 bp CTGCATCTGGCATGTGTTGAAATGCAATCATCATCACAGCAAAGCAGCCCTGGGGCATCCAAACTGTTGTaGATTCCTGCTAAAGAGGAG +
Preference number: 2 (lower is better)
Translates to: LHLACVEMQSSSQQSSPGASKLL*IPAKEE
Trigger: CTCCTCTTTAGCAGGAATTCACAACAGTTTGGATGC...CCCAGGGCTGCTTTGCTGTGATGATGATTGCATTTCAACACATGCCAGATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR TCA 90 bp TCCCCAATGTTTCGTTCATTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGATCTCCCTCTGTCTGGTaGATTTTCACCACAGTTTCG +
Preference number: 2 (lower is better)
Translates to: SPMFRSFVETCLFTPGSRSPSVW*IFTTVS
Trigger: CGAAACTGTGGTGAAAATTCACCAGACAGAGGGAGA...TCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAATGAACGAAACATTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR TCA 90 bp GGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGTGGGCACTTGAAACTTaGCAAGAAGCTTTTTCAATT +
Preference number: 2 (lower is better)
Translates to: GLQWLTFLLVSHRAGPGLWALET*QEAFSI
Trigger: AATTGAAAAAGCTTCTTGTCAAGTTTCAAGTGCCCA...CAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp CCACAAAGATATTCTGGATCTGCATCATGGCAGCGATGCTTAGAATTTCCTGAGGTTTGGGAGACCCTGTaGCCATCAGACATGCCCTTT +
Preference number: 2 (lower is better)
Translates to: PQRYSGSASWQRCLEFPEVWETL*PSDMPF
Trigger: AAAGGGCATGTCTGATGGGCACAGGGTCTCCCAAAC...CTCAGGAAATTCTAAGCATCGCTGCCATGATGCAGATCCAGAATATCTTTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp CCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGACTGCAGGATGACAGGTaGCAAATTACTACGCTGCAT +
Preference number: 2 (lower is better)
Translates to: PTWCFGLQWLTFLLVSHRLQDDR*QITTLH
Trigger: ATGCAGCGTAGTAATTTGGCACCTGTCATCCTGCAG...TCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp GTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCTGTTTTGGCCTTCAGTaGCTAACTTTCCTCCTTGTT +
Preference number: 2 (lower is better)
Translates to: VHPTWCFGLQWLTFLLVSCFGLQ*LTFLLV
Trigger: AACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACA...GGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp TGCTTAGAATTTCCTGAGAACAGCCGAAGTTTCCTGATTCAAGCAGCATTTTGGACAGACAGAAGCCACTaGGTTTGGGAGACCCTGTGC +
Preference number: 2 (lower is better)
Translates to: CLEFPENSRSFLIQAAFWTDRSH*VWETLC
Trigger: GCACAGGGTCTCCCAAACCCAGTGGCTTCTGTCTGT...CCAAAATGCTGCTTGAATCAGGAAACTTCGGCTGTTCTCAGGAAATTCTAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR TCA 90 bp TCCCCAATGTTTCGTTCATTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGACTTTCTGACACTGCGTaGCACCCTTTCAAACACTTT +
Preference number: 2 (lower is better)
Translates to: SPMFRSFVETCLFTPGSRLSDTA*HPFKHF
Trigger: AAAGTGTTTGAAAGGGTGTCACGCAGTGTCAGAAAG...TCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAATGAACGAAACATTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR TCA 90 bp GACCTTGGCCCTTTTGGCTTTCAGAGACAGGTGCGTTCCTTGTTGATAAAAGTGGACTTCCTGGGCACTTaGAACTTGACAAGAAGCTTT +
Preference number: 2 (lower is better)
Translates to: DLGPFGFQRQVRSLLIKVDFLGT*NLTRSF
Trigger: AAAGCTTCTTGTCAAGTTTCAAGTGCCCAGGAAGTC...CACTTTTATCAACAAGGAACGCACCTGTCTCTGAAAGCCAAAAGGGCCAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp GACCTTGGCCCTTTTGGCTTTCAGAGACAGGTGCGTTCCTTGTTGATAAAAGTGTGTGATAGAGGTTTCTaGCACATTGGTGGCCACTAT +
Preference number: 2 (lower is better)
Translates to: DLGPFGFQRQVRSLLIKVCDRGF*HIGGHY
Trigger: ATAGTGGCCACCAATGTGGCAGAAACCTCTATCACA...CACTTTTATCAACAAGGAACGCACCTGTCTCTGAAAGCCAAAAGGGCCAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp GCACTACACTCTGAGAGGACGCTAAGCCTACCTGTGAAACACAAATCCTCTGCTTGTTTTGGCCTTCAGTaGCTAACTTTCCTCCTTGTT +
Preference number: 2 (lower is better)
Translates to: ALHSERTLSLPVKHKSSACFGLQ*LTFLLV
Trigger: AACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACA...AGCAGAGGATTTGTGTTTCACAGGTAGGCTTAGCGTCCTCTCAGAGTGTAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp GGACTGACGCAGGGTGTATGTGCAGCTCATGGTCATCACGGATGGTCCTATAAGATTCAAGCAGCATTTTaGCAAACATGGGATTCAAAG +
Preference number: 2 (lower is better)
Translates to: GLTQGVCAAHGHHGWSYKIQAAF*QTWDSK
Trigger: CTTTGAATCCCATGTTTGCCAAAATGCTGCTTGAAT...CTTATAGGACCATCCGTGATGACCATGAGCTGCACATACACCCTGCGTCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR TCA 90 bp AATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGCTGTTTCGACAGTTGATTTaGTATAATCTGGAACAGGAC +
Preference number: 2 (lower is better)
Translates to: NHQSLASLLAADKQGQGLFRQLI*YNLEQD
Trigger: GTCCTGTTCCAGATTATATCAAATCAACTGTCGAAA...CAGCCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp GTGATGTTCCTGAGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGTCATTCGTAGAGACATaGTTGTTCACACCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: VMFLSYRSLGHPNCCEFLSFVET*LFTPGS
Trigger: GCTGCCAGGTGTGAACAAGCATGTCTCTACGAATGA...CAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCTCAGGAACATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp TTCCTGAGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGCTAAAGCAATCACCAATCCCTTaGAAGTCTCCTGGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: FLSYRSLGHPNCCEFLLKQSPIP*KSPGCR
Trigger: TCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTG...CTTTAGCAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCTCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp TCTGTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCAAACACTTTCATTTaGTCAAAGGAAGGCAGTCCT +
Preference number: 2 (lower is better)
Translates to: SVHPTWCFGLQWLTFLLVSNTFI*SKEGSP
Trigger: AGGACTGCCTTCCTTTGAGCAAATGAAAGTGTTTGA...AACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp TATATTGAGCATAGTGAGGTGGTCGCCCTCCTCCACAGCAAATTTACGGTGCACTTTTTAGCAAGCCAATaGCAATGTCAGTGTACAAGG +
Preference number: 2 (lower is better)
Translates to: YIEHSEVVALLHSKFTVHFLASQ*QCQCTR
Trigger: CCTTGTACACTGACATTGCCATTGGCTTGCTAAAAA...GTGCACCGTAAATTTGCTGTGGAGGAGGGCGACCACCTCACTATGCTCAATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp TTCCTGAGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGCTAAAGTCATTCGTAGAGACATaGTTGTTCACACCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: FLSYRSLGHPNCCEFLLKSFVET*LFTPGS
Trigger: GCTGCCAGGTGTGAACAAGCATGTCTCTACGAATGA...CTTTAGCAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCTCAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp GACCTTGGCCCTTTTGGCTTTCAGAGACAGGTGCGTTCCTTGTTGATAAAAGTGTTTTTAGCAAGCCAATaGCAATGTCAGTGTACAAGG +
Preference number: 2 (lower is better)
Translates to: DLGPFGFQRQVRSLLIKVFLASQ*QCQCTR
Trigger: CCTTGTACACTGACATTGCCATTGGCTTGCTAAAAA...CACTTTTATCAACAAGGAACGCACCTGTCTCTGAAAGCCAAAAGGGCCAAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp ACGGATGGTCCTATAAGCTCCAGTAGAATGAAACCTCGCTGCATTGGCGAAGAAACATGTATCCCTTGCTaGATCACTGGTTTCATTTTG +
Preference number: 2 (lower is better)
Translates to: TDGPISSSRMKPRCIGEETCIPC*ITGFIL
Trigger: CAAAATGAAACCAGTGATCCAGCAAGGGATACATGT...TTCTTCGCCAATGCAGCGAGGTTTCATTCTACTGGAGCTTATAGGACCATCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp AATGACATACACGTTTGGTGCCAAAAGTGGCACATCCAAACTAATATCAGTATAACGGGTCCTGGACCTTaGCCCTTTTGGCTTTCAGAG +
Preference number: 2 (lower is better)
Translates to: NDIHVWCQKWHIQTNISITGPGP*PFWLSE
Trigger: CTCTGAAAGCCAAAAGGGCCAAGGTCCAGGACCCGT...TATACTGATATTAGTTTGGATGTGCCACTTTTGGCACCAAACGTGTATGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR TCA 90 bp ACGGATGGTCCTATAAGCTCCAGTAGAATGAAACCTCGCTGCATTGGCGAAGAATGGGCACTTGAAACTTaGCAAGAAGCTTTTTCAATT +
Preference number: 2 (lower is better)
Translates to: TDGPISSSRMKPRCIGEEWALET*QEAFSI
Trigger: AATTGAAAAAGCTTCTTGTCAAGTTTCAAGTGCCCA...TTCTTCGCCAATGCAGCGAGGTTTCATTCTACTGGAGCTTATAGGACCATCCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp CGCAGCTCTGACAAGACCCTTGTAATTCAGGAAATGTTCCTGACACCATTTAGAATTCAAAGGAAACTCTaGAATTCTCATGCCAAGCGG +
Preference number: 2 (lower is better)
Translates to: RSSDKTLVIQEMFLTPFRIQRKL*NSHAKR
Trigger: CCGCTTGGCATGAGAATTGCAGAGTTTCCTTTGAAT...TCTAAATGGTGTCAGGAACATTTCCTGAATTACAAGGGTCTTGTCAGAGCTGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CCA 90 bp AATGACATACACGTTTGGTGCCAAAAGTGGCACATCCAAACTAATATCAGTATACCCTTGCAAGTCTCCTaGCTGCAGATAAACAGGGAC +
Preference number: 2 (lower is better)
Translates to: NDIHVWCQKWHIQTNISIPLQVS*LQINRD
Trigger: GTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGG...TATACTGATATTAGTTTGGATGTGCCACTTTTGGCACCAAACGTGTATGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR TCA 90 bp AGCCGAAGTTTCCTGATTCAAGCAGCATTTTGGCAAACATGGGATTCAAAGGAAGCATCTGGCATGTGTTaGAATGCAATCATCATCACA +
Preference number: 2 (lower is better)
Translates to: SRSFLIQAAFWQTWDSKEASGMC*NAIIIT
Trigger: TGTGATGATGATTGCATTTCAACACATGCCAGATGC...TTCCTTTGAATCCCATGTTTGCCAAAATGCTGCTTGAATCAGGAAACTTCGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp CACTTGAAACTTGACAAGAAGCTTTTTCAATTGTTCTCTTACAGTCGCAGCTCTTCATTCGTAGAGACATaGTTGTTCACACCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: HLKLDKKLFQLFSYSRSSSFVET*LFTPGS
Trigger: GCTGCCAGGTGTGAACAAGCATGTCTCTACGAATGA...AGAGCTGCGACTGTAAGAGAACAATTGAAAAAGCTTCTTGTCAAGTTTCAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR GCA 90 bp AATGACATACACGTTTGGTGCCAAAAGTGGCACATCCAAACTAATATCAGTATACCTAGTGCTTTCAGCTaGAGGATGACAGGTGCCAAA +
Preference number: 2 (lower is better)
Translates to: NDIHVWCQKWHIQTNISIPSAFS*RMTGAK
Trigger: TTTGGCACCTGTCATCCTGCAGCTGAAAGCACTAGG...TATACTGATATTAGTTTGGATGTGCCACTTTTGGCACCAAACGTGTATGTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR GCA 72 bp GCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATaGCTGCCCATGCACAAAGTCCTCCAGGATCCCAGC +
Preference number: 3 (lower is better)
Translates to: ANSHSARCSTEG*LPMHKVLQDPS
Trigger: GCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR GCA 72 bp ACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTaGCCATGCACAAAGTCCTCCAGGATCCCAGCAAGG +
Preference number: 3 (lower is better)
Translates to: TPTLPAAAQKDA*PCTKSSRIPAR
Trigger: CCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR CCA 72 bp CCTGCAGCTGTAGCTGTGGGCTCCTCTCACGGGTCCTaGACCTTGGCCCTTTTGGCTTTCAGAGACAGGTGC +
Preference number: 3 (lower is better)
Translates to: PAAVAVGSSHGS*TLALLAFRDRC
Trigger: GCACCTGTCTCTGAAAGCCAAAAGGGCCAAGGTCCAGGACCCGTGAGAGGAGCCCACAGCTACAGCTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR TCA 72 bp CTGGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTaGGCCAACTCCCACTCTGCCCGCTGCAGCACAGAA +
Preference number: 3 (lower is better)
Translates to: LEVACWVSERAE*ANSHSARCSTE
Trigger: TTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR TCA 72 bp GCGACTACGACCACCACGTCCTGCTCGCTGATTAGCTaGTGCCTGGGAGACTGGCACCACCACCAAGCATTC +
Preference number: 3 (lower is better)
Translates to: ATTTTTSCSLIS*CLGDWHHHQAF
Trigger: GAATGCTTGGTGGTGGTGCCAGTCTCCCAGGCATCAGCTAATCAGCGAGCAGGACGTGGTGGTCGTAGTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR GCA 72 bp GGCCCTGTGGGATCTGAGCTGATGAACTCTCCTGAGTaGTCAGCTAGCGTGGCACCAGGACCTGGCACTACA +
Preference number: 3 (lower is better)
Translates to: GPVGSELMNSPE*SASVAPGPGTT
Trigger: TGTAGTGCCAGGTCCTGGTGCCACGCTAGCTGAGCACTCAGGAGAGTTCATCAGCTCAGATCCCACAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CAA 90 bp GCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCAGAAGCCACTGGGTTaGGGAGACCCTGTGCCCATC +
Preference number: 3 (lower is better)
Translates to: ATKPVPAGRTVPTRSCKNQKPLG*GDPVPI
Trigger: GATGGGCACAGGGTCTCCCAAACCCAGTGGCTTCTG...GTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR TCA 72 bp GATGACCCAGCGAGGCGGCTTCTCTGCATAGAGGACTaGCGCAGGGTGTATGTGCAGCTCATGGTCATCACG +
Preference number: 3 (lower is better)
Translates to: DDPARRLLCIED*RRVYVQLMVIT
Trigger: CGTGATGACCATGAGCTGCACATACACCCTGCGTCAGTCCTCTATGCAGAGAAGCCGCCTCGCTGGGTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR GCA 72 bp ACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATaGACAAAGTCCTCCAGGATCCCAGCAAGGATGCAA +
Preference number: 3 (lower is better)
Translates to: TLPAAAQKDACP*TKSSRIPARMQ
Trigger: TTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR GCA 72 bp CTTGTTTCCCATAGAGCTGGGCCAGGACTGCATGCCTaGTGGAAGTGGCATGCTGGGTTAGTGAGCGTGCTG +
Preference number: 3 (lower is better)
Translates to: LVSHRAGPGLHA*WKWHAGLVSVL
Trigger: CAGCACGCTCACTAACCCAGCATGCCACTTCCAGCAGGCATGCAGTCCTGGCCCAGCTCTATGGGAAACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR CCA 72 bp GTTTCCCATAGAGCTGGGCCAGGACTGCATGCCTGCTaGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGT +
Preference number: 3 (lower is better)
Translates to: VSHRAGPGLHAC*KWHAGLVSVLS
Trigger: ACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCAGGCATGCAGTCCTGGCCCAGCTCTATGGGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR TCA 72 bp TCCAGACCTCCCAGAGCATACAGTAACTCCAAGGCTTaGACCATCGACTGTGCTGGAGGGGGCTTGTCTGGC +
Preference number: 3 (lower is better)
Translates to: SRPPRAYSNSKA*TIDCAGGGLSG
Trigger: GCCAGACAAGCCCCCTCCAGCACAGTCGATGGTTCAAGCCTTGGAGTTACTGTATGCTCTGGGAGGTCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652169.1
3UTR-3UTR CAA 90 bp CAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCTGGCAGCAGACCTCATaGGTTAACACAGCTGTGGCC +
Preference number: 3 (lower is better)
Translates to: QQNQCLLEELSPRALARTWQQTS*VNTAVA
Trigger: GGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCA...GGTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CAA 90 bp GTCAATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGCAGAAGCCACTGGGTTaGGGAGACCCTGTGCCCATC +
Preference number: 3 (lower is better)
Translates to: VNHQSLASLLAADKQGQGQKPLG*GDPVPI
Trigger: GATGGGCACAGGGTCTCCCAAACCCAGTGGCTTCTG...CCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR TCA 72 bp TCATCCCAGTGCGAGCTAGTGCTCGAGCCTGCTCGATaGGCATCGACACAACAGTTTCTACCTCTTCCTGGC +
Preference number: 3 (lower is better)
Translates to: SSQCELVLEPAR*ASTQQFLPLPG
Trigger: GCCAGGAAGAGGTAGAAACTGTTGTGTCGATGCTCATCGAGCAGGCTCGAGCACTAGCTCGCACTGGGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR TCA 72 bp TCCAGACCTCCCAGAGCATACAGTAACTCCAAGGCTTaGACCATCGACTGTGCTGGAGGGGGCGACATGAAG +
Preference number: 3 (lower is better)
Translates to: SRPPRAYSNSKA*TIDCAGGGDMK
Trigger: CTTCATGTCGCCCCCTCCAGCACAGTCGATGGTTCAAGCCTTGGAGTTACTGTATGCTCTGGGAGGTCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484417.5
3UTR-3UTR CAA 90 bp CAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCTCAATCACCAATCCCTaGCAAGTCTCCTGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: QQNQCLLEELSPRALARTSITNP*QVSWLQ
Trigger: CTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGA...GGTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CAA 90 bp ACCATCGACTGTGCTGGAGGGGGCGACATGAAGTGGAACCTGAGGACATTGTCATCAATCACCAATCCCTaGCAAGTCTCCTGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: TIDCAGGGDMKWNLRTLSSITNP*QVSWLQ
Trigger: CTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGA...TGACAATGTCCTCAGGTTCCACTTCATGTCGCCCCCTCCAGCACAGTCGATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484417.5
3UTR CCA 72 bp CCCTCTGTCCACCCCACATGGTGTTTTGGCCTTCAGTaGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGG +
Preference number: 3 (lower is better)
Translates to: PSVHPTWCFGLQ*LTFLLVSHRAG
Trigger: CCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGACAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR CCA 72 bp GCCCAGCAAACCCTCTGTCCACCCCACATGGTGTTTTaGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCA +
Preference number: 3 (lower is better)
Translates to: AQQTLCPPHMVF*PSVANFPPCFP
Trigger: TGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGACAGAGGGTTTGCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR CCA 72 bp CAAAGCCAGCCCAGCAAACCCTCTGTCCACCCCACATaGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTT +
Preference number: 3 (lower is better)
Translates to: QSQPSKPSVHPT*CFGLQWLTFLL
Trigger: AAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGACAGAGGGTTTGCTGGGCTGGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR CCA 72 bp TGGGCTCCTCTCACGGGTCCTGGACCTTGGCCCTTTTaGCTTTCAGAGACAGGTGCGTTCCTTGTTGATAAA +
Preference number: 3 (lower is better)
Translates to: WAPLTGPGPWPF*LSETGAFLVDK
Trigger: TTTATCAACAAGGAACGCACCTGTCTCTGAAAGCCAAAAGGGCCAAGGTCCAGGACCCGTGAGAGGAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CAA 90 bp TCAATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGCTGGCAGCAGACCTCATaGGTTAACACAGCTGTGGCC +
Preference number: 3 (lower is better)
Translates to: SITNPLQVSWLQINRDKGWQQTS*VNTAVA
Trigger: GGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCA...GCCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CAA 90 bp GGACTGACGCAGGGTGTATGTGCAGCTCATGGTCATCACGGATGGTCCTATAAGTCAATCACCAATCCCTaGCAAGTCTCCTGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: GLTQGVCAAHGHHGWSYKSITNP*QVSWLQ
Trigger: CTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGA...CTTATAGGACCATCCGTGATGACCATGAGCTGCACATACACCCTGCGTCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR GCA 72 bp GCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATaGTGTGGGCAGCGGGAAGAAAGGACTAATGAACAG +
Preference number: 3 (lower is better)
Translates to: AQSPPGSQQGCK*CGQREERTNEQ
Trigger: CTGTTCATTAGTCCTTTCTTCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR GCA 72 bp TGTCTCTTCATCCCAGTGCGAGCTAGTGCTCGAGCCTaGTCGATGAGCATCGACACAACAGTTTCTACCTCT +
Preference number: 3 (lower is better)
Translates to: CLFIPVRASARA*SMSIDTTVSTS
Trigger: AGAGGTAGAAACTGTTGTGTCGATGCTCATCGAGCAGGCTCGAGCACTAGCTCGCACTGGGATGAAGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR CCA 72 bp TTGGGAGACCCTGTGCCCATCAGACATGCCCTTTGGTaGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTC +
Preference number: 3 (lower is better)
Translates to: LGDPVPIRHALW*FRQRSPMFRSF
Trigger: GAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR CCA 72 bp AGTGTGGAGCCAGCTCCAACAGCCAGGCCGATTCAATaGCAGTCACATCTCTCATGTAGTACTTGGAGGTCT +
Preference number: 3 (lower is better)
Translates to: SVEPAPTARPIQ*QSHLSCSTWRS
Trigger: AGACCTCCAAGTACTACATGAGAGATGTGACTGCCATTGAATCGGCCTGGCTGTTGGAGCTGGCTCCACACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CAA 90 bp GCACTACACTCTGAGAGGACGCTAAGCCTACCTGTGAAACACAAATCCTCTGCTCATCAGACATGCCCTTaGGTGGTTTCGGCAGAGATC +
Preference number: 3 (lower is better)
Translates to: ALHSERTLSLPVKHKSSAHQTCP*VVSAEI
Trigger: GATCTCTGCCGAAACCACCAAAGGGCATGTCTGATG...AGCAGAGGATTTGTGTTTCACAGGTAGGCTTAGCGTCCTCTCAGAGTGTAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CAA 90 bp GTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCGAGGTTTCTGCCACATaGGTGGCCACTATCACCTTT +
Preference number: 3 (lower is better)
Translates to: VHPTWCFGLQWLTFLLVSEVSAT*VATITF
Trigger: AAAGGTGATAGTGGCCACCAATGTGGCAGAAACCTC...GGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CAA 90 bp AACCTCGCTGCATTGGCGAAGAAGCCGGAGACAATGCACCTCAGAACCAGATCCTGGAACCTGAGGACATaGTCAATTCCTAGTGCTTTC +
Preference number: 3 (lower is better)
Translates to: NLAALAKKPETMHLRTRSWNLRT*SIPSAF
Trigger: GAAAGCACTAGGAATTGACAATGTCCTCAGGTTCCA...GGATCTGGTTCTGAGGTGCATTGTCTCCGGCTTCTTCGCCAATGCAGCGAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR GCA 72 bp GATGGTCCTATAAGCTCCAGTAGAATGAAACCTCGCTaGATTGGCGAAGAAGCCGGAGACAATGCACCTCAG +
Preference number: 3 (lower is better)
Translates to: DGPISSSRMKPR*IGEEAGDNAPQ
Trigger: CTGAGGTGCATTGTCTCCGGCTTCTTCGCCAATGCAGCGAGGTTTCATTCTACTGGAGCTTATAGGACCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR CCA 72 bp CTTTCATTTGCTCAAAGGAAGGCAGTCCTGCATACATaGGGAGAACTCGGAGGTGTCTCTTCATCCCAGTGC +
Preference number: 3 (lower is better)
Translates to: LSFAQRKAVLHT*GELGGVSSSQC
Trigger: GCACTGGGATGAAGAGACACCTCCGAGTTCTCCCCATGTATGCAGGACTGCCTTCCTTTGAGCAAATGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR CCA 72 bp TTTCAGAGACAGGTGCGTTCCTTGTTGATAAAAGTGTaGAGCCAGCTCCAACAGCCAGGCCGATTCAATGGC +
Preference number: 3 (lower is better)
Translates to: FQRQVRSLLIKV*SQLQQPGRFNG
Trigger: GCCATTGAATCGGCCTGGCTGTTGGAGCTGGCTCCACACTTTTATCAACAAGGAACGCACCTGTCTCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CAA 90 bp GCACTACACTCTGAGAGGACGCTAAGCCTACCTGTGAAACACAAATCCTCTGCTTTCGTAGAGACATGCTaGTTCACACCTGGCAGCAGA +
Preference number: 3 (lower is better)
Translates to: ALHSERTLSLPVKHKSSAFVETC*FTPGSR
Trigger: TCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAA...AGCAGAGGATTTGTGTTTCACAGGTAGGCTTAGCGTCCTCTCAGAGTGTAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CAA 90 bp AAAGCAGACACACAACACATGACCGACATGAAGTGGAACCTGAGGACATTGTCATGTCCCCACGCGCTCTaGCAAGAACCCAAGCAAACA +
Preference number: 3 (lower is better)
Translates to: KADTQHMTDMKWNLRTLSCPHAL*QEPKQT
Trigger: TGTTTGCTTGGGTTCTTGCAAGAGCGCGTGGGGACA...TGACAATGTCCTCAGGTTCCACTTCATGTCGGTCATGTGTTGTGTGTCTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652169.1
3UTR-3UTR CAA 90 bp CAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGCATGCCTGCATCTGGCATGTGTaGAAATGCAATCATCATCAC +
Preference number: 3 (lower is better)
Translates to: QWLTFLLVSHRAGPGLHACIWHV*KCNHHH
Trigger: GTGATGATGATTGCATTTCAACACATGCCAGATGCA...GGCATGCAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CAA 90 bp GTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCAAGAAATCCCGGAATTaGTCTGCATCCAGAGTGGCT +
Preference number: 3 (lower is better)
Translates to: VHPTWCFGLQWLTFLLVSKKSRN*SASRVA
Trigger: AGCCACTCTGGATGCAGACAAATTCCGGGATTTCTT...GGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR TCA 72 bp CCTGAGCTACAGAAGTTTAGGGCATCCAAACTGTTGTaGATTCCTGCTAAAGAGGAGGCCCTGTGGGATCTG +
Preference number: 3 (lower is better)
Translates to: PELQKFRASKLL*IPAKEEALWDL
Trigger: CAGATCCCACAGGGCCTCCTCTTTAGCAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR CCA 72 bp GTTTCGTTCATTCGTAGAGACATGCTTGTTCACACCTaGCAGCAGACCTCATTGGTTAACACAGCTGTGGCC +
Preference number: 3 (lower is better)
Translates to: VSFIRRDMLVHT*QQTSLVNTAVA
Trigger: GGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAATGAACGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CAA 90 bp CCACAAAGATATTCTGGATCTGCATCATGGCAGCGATGCTTAGAATTTCCTGAGTGGCAGCAGACCTCATaGGTTAACACAGCTGTGGCC +
Preference number: 3 (lower is better)
Translates to: PQRYSGSASWQRCLEFPEWQQTS*VNTAVA
Trigger: GGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCA...CTCAGGAAATTCTAAGCATCGCTGCCATGATGCAGATCCAGAATATCTTTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CAA 90 bp TTCCTGAGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGCTAAAGTGGCAGCAGACCTCATaGGTTAACACAGCTGTGGCC +
Preference number: 3 (lower is better)
Translates to: FLSYRSLGHPNCCEFLLKWQQTS*VNTAVA
Trigger: GGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCA...CTTTAGCAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCTCAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CAA 90 bp AGCCGAAGTTTCCTGATTCAAGCAGCATTTTGGCAAACATGGGATTCAAAGGAACATCAGACATGCCCTTaGGTGGTTTCGGCAGAGATC +
Preference number: 3 (lower is better)
Translates to: SRSFLIQAAFWQTWDSKEHQTCP*VVSAEI
Trigger: GATCTCTGCCGAAACCACCAAAGGGCATGTCTGATG...TTCCTTTGAATCCCATGTTTGCCAAAATGCTGCTTGAATCAGGAAACTTCGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CAA 90 bp CCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGATCACACATGTATCCCTaGCTGGATCACTGGTTTCAT +
Preference number: 3 (lower is better)
Translates to: PTWCFGLQWLTFLLVSHRSHMYP*LDHWFH
Trigger: ATGAAACCAGTGATCCAGCAAGGGATACATGTGTGA...TCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CAA 90 bp TCCAGTAGAATGAAACCTCGCTGCATTGGCGAAGAAGCCGGAGACAATGCACCTAAGAAGCTTTTTCAATaGTTCTCTTACAGTCGCAGC +
Preference number: 3 (lower is better)
Translates to: SSRMKPRCIGEEAGDNAPKKLFQ*FSYSRS
Trigger: GCTGCGACTGTAAGAGAACAATTGAAAAAGCTTCTT...AGGTGCATTGTCTCCGGCTTCTTCGCCAATGCAGCGAGGTTTCATTCTACTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR TCA 72 bp GGACATTGTCAATTCCTAGTGCTTTCAGCTGCAGGATaGCAGGTGCCAAATTACTACGCTGCATCTCAGGAA +
Preference number: 3 (lower is better)
Translates to: GHCQFLVLSAAG*QVPNYYAASQE
Trigger: TTCCTGAGATGCAGCGTAGTAATTTGGCACCTGTCATCCTGCAGCTGAAAGCACTAGGAATTGACAATGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR GCA 72 bp CAGAGATCCCCAATGTTTCGTTCATTCGTAGAGACATaGTTGTTCACACCTGGCAGCAGACCTCATTGGTTA +
Preference number: 3 (lower is better)
Translates to: QRSPMFRSFVET*LFTPGSRPHWL
Trigger: TAACCAATGAGGTCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAATGAACGAAACATTGGGGATCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR GCA 72 bp CACATACACAATGCCGCTGATTGTGATAGAGGTTTCTaGCACATTGGTGGCCACTATCACCTTTCTGACACT +
Preference number: 3 (lower is better)
Translates to: HIHNAADCDRGF*HIGGHYHLSDT
Trigger: AGTGTCAGAAAGGTGATAGTGGCCACCAATGTGGCAGAAACCTCTATCACAATCAGCGGCATTGTGTATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR CCA 72 bp TTTACGGTGCACTCGAATTGCGTGAGACTTCTGGTTTaGGGGGACCACAAAGATATTCTGGATCTGCATCAT +
Preference number: 3 (lower is better)
Translates to: FTVHSNCVRLLV*GDHKDILDLHH
Trigger: ATGATGCAGATCCAGAATATCTTTGTGGTCCCCCCAAACCAGAAGTCTCACGCAATTCGAGTGCACCGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR TCA 72 bp CACATTGGTGGCCACTATCACCTTTCTGACACTGCGTaGCACCCTTTCAAACACTTTCATTTGCTCAAAGGA +
Preference number: 3 (lower is better)
Translates to: HIGGHYHLSDTA*HPFKHFHLLKG
Trigger: TCCTTTGAGCAAATGAAAGTGTTTGAAAGGGTGTCACGCAGTGTCAGAAAGGTGATAGTGGCCACCAATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR TCA 72 bp TGGATCTGCATCATGGCAGCGATGCTTAGAATTTCCTaGGAACAGCCGAAGTTTCCTGATTCAAGCAGCATT +
Preference number: 3 (lower is better)
Translates to: WICIMAAMLRIS*EQPKFPDSSSI
Trigger: AATGCTGCTTGAATCAGGAAACTTCGGCTGTTCTCAGGAAATTCTAAGCATCGCTGCCATGATGCAGATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR CCA 72 bp TGCAAAGCAGACACACAACACATGACCGACATGAAGTaGAACCTGAGGACATTGTCAATTCCTAGTGCTTTC +
Preference number: 3 (lower is better)
Translates to: CKADTQHMTDMK*NLRTLSIPSAF
Trigger: GAAAGCACTAGGAATTGACAATGTCCTCAGGTTCCACTTCATGTCGGTCATGTGTTGTGTGTCTGCTTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652169.1
3UTR TCA 72 bp AAAGAAATCCCGGAATTTGTCTGCATCCAGAGTGGCTaGAGCTACAATCAATCGAAGATCCCCTCGCTTTTT +
Preference number: 3 (lower is better)
Translates to: KEIPEFVCIQSG*SYNQSKIPSLF
Trigger: AAAAAGCGAGGGGATCTTCGATTGATTGTAGCTTCAGCCACTCTGGATGCAGACAAATTCCGGGATTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR CCA 72 bp AAGCCAATGGCAATGTCAGTGTACAAGGTCCTCTCGTaGGCTTCATCCAGCATGATGACACTATATTTTGTT +
Preference number: 3 (lower is better)
Translates to: KPMAMSVYKVLS*ASSSMMTLYFV
Trigger: AACAAAATATAGTGTCATCATGCTGGATGAAGCCCACGAGAGGACCTTGTACACTGACATTGCCATTGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CAA 90 bp AATGACATACACGTTTGGTGCCAAAAGTGGCACATCCAAACTAATATCAGTATACATCAGACATGCCCTTaGGTGGTTTCGGCAGAGATC +
Preference number: 3 (lower is better)
Translates to: NDIHVWCQKWHIQTNISIHQTCP*VVSAEI
Trigger: GATCTCTGCCGAAACCACCAAAGGGCATGTCTGATG...TATACTGATATTAGTTTGGATGTGCCACTTTTGGCACCAAACGTGTATGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR TCA 72 bp AGATCCGGGTCACCTTCACTAGACTTCCTGGGCACTTaGAACTTGACAAGAAGCTTTTTCAATTGTTCTCTT +
Preference number: 3 (lower is better)
Translates to: RSGSPSLDFLGT*NLTRSFFNCSL
Trigger: AAGAGAACAATTGAAAAAGCTTCTTGTCAAGTTTCAAGTGCCCAGGAAGTCTAGTGAAGGTGACCCGGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR TCA 72 bp AGAAATGCTAAAACGTCTCCGTCTCCCTCTGTCTGGTaGATTTTCACCACAGTTTCGACAGTTGATTTGATA +
Preference number: 3 (lower is better)
Translates to: RNAKTSPSPSVW*IFTTVSTVDLI
Trigger: TATCAAATCAACTGTCGAAACTGTGGTGAAAATTCACCAGACAGAGGGAGACGGAGACGTTTTAGCATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR-3UTR CAA 90 bp CACTTGAAACTTGACAAGAAGCTTTTTCAATTGTTCTCTTACAGTCGCAGCTCTTGCATCTGGCATGTGTaGAAATGCAATCATCATCAC +
Preference number: 3 (lower is better)
Translates to: HLKLDKKLFQLFSYSRSSCIWHV*KCNHHH
Trigger: GTGATGATGATTGCATTTCAACACATGCCAGATGCA...AGAGCTGCGACTGTAAGAGAACAATTGAAAAAGCTTCTTGTCAAGTTTCAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR TCA 72 bp TCTGGTGAATTTTCACCACAGTTTCGACAGTTGATTTaGTATAATCTGGAACAGGACTTTGTAGATAAAAGA +
Preference number: 3 (lower is better)
Translates to: SGEFSPQFRQLI*YNLEQDFVDKR
Trigger: TCTTTTATCTACAAAGTCCTGTTCCAGATTATATCAAATCAACTGTCGAAACTGTGGTGAAAATTCACCAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGCTCACCCCACCTaGGACCAGGGGCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: LPLCPLQHRRMPAHAQSPPAHPT*DQGQQH
Trigger: ATGCTGCTGCCCCTGGTCCCAGGTGGGGTGAGCTGG...AGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp AGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCAGTGAGCGTGCTGAGTaGGCCAACTCCCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: SEPTPTLPAAAQKDACPCSERAE*ANSHSA
Trigger: GGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACT...GCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTTTCCACAGGAGCTGGTaGCAGCTCACCCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: LPLCPLQHRRMPAHAQSPFHRSW*QLTPPG
Trigger: CCCAGGTGGGGTGAGCTGGCACCAGCTCCTGTGGAA...AGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATTTCCACAGGAGCTGGTaGCAGCTCACCCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: VSVLSEPTPTLPAAAQKDFHRSW*QLTPPG
Trigger: CCCAGGTGGGGTGAGCTGGCACCAGCTCCTGTGGAA...ATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCTCCCACTCTGCCCGCTaGAGCACAGAAGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: PTLPAAAQKDACPCTKSSSHSAR*STEGCL
Trigger: CAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGA...GGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGACTGCATGCCTaGTGGAAGTGGCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: LPLCPLQHRRMPAHAQSPPGLHA*WKWHAG
Trigger: CCCAGCATGCCACTTCCAGCAGGCATGCAGTCCTGG...AGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCCCAGCTCACCCCACCTaGGACCAGGGGCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: LPMHKVLQDPSKDANAVGPAHPT*DQGQQH
Trigger: ATGCTGCTGCCCCTGGTCCCAGGTGGGGTGAGCTGG...GCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGACCAGCTCACCCCACCTaGGACCAGGGGCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: CTKSSRIPARMQMLWAAGPAHPT*DQGQQH
Trigger: ATGCTGCTGCCCCTGGTCCCAGGTGGGGTGAGCTGG...TCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp GTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATCCTGGCACTACACTCTaGGAGGACGCTAAGCCTACC +
Preference number: 4 (lower is better)
Translates to: VSVLSEPTPTLPAAAQKDPGTTL*EDAKPT
Trigger: GGTAGGCTTAGCGTCCTCTCAGAGTGTAGTGCCAGG...ATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCACTCGTGGCCCAGCACTaGACCCCTTTCTTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: PLCPLQHRRMPAHAQSPPLVAQH*TPFFSY
Trigger: GTAGCTGAAGAAAGGGGTGCAGTGCTGGGCCACGAG...TGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAATTCCACAGGAGCTGGTaGCAGCTCACCCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: AQSPPGSQQGCKCCGQREFHRSW*QLTPPG
Trigger: CCCAGGTGGGGTGAGCTGGCACCAGCTCCTGTGGAA...TTCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp ACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCGGATCCCAGCAAGGATaGAAATGCTGTGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: TPTLPAAAQKDACPCTKSGSQQG*KCCGQR
Trigger: CCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCC...GGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGGGAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCAGCCAACTCCCACTCTaGCCGCTGCAGCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: WETLCPSDMPFGGFGRDPSQLPL*PLQHRR
Trigger: CCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCT...GGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp ACAGGCCGCAGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTGCCAGCGGGCGCAGCCATGTTaGGGTAAAAGGTCACGAGGC +
Preference number: 4 (lower is better)
Translates to: TGRSPLQSNQTFHRSWCQRAQPC*GKRSRG
Trigger: GCCTCGTGACCTTTTACCCCAACATGGCTGCGCCCG...CTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCTGCGGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
CDS-3UTR CCA 90 bp GTTTCCCATAGAGCTGGGCCAGGACTGCATGCCTGCTGGAAGTGGCATGCTGGGACATTCCACAGGAGCTaGTGCCAGCTCACCCCACCT +
Preference number: 4 (lower is better)
Translates to: VSHRAGPGLHACWKWHAGTFHRS*CQLTPP
Trigger: AGGTGGGGTGAGCTGGCACCAGCTCCTGTGGAATGT...CCCAGCATGCCACTTCCAGCAGGCATGCAGTCCTGGCCCAGCTCTATGGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GTTTCCCATAGAGCTGGGCCAGGACTGCATGCCTGCTGGAAGTGGCATGCTGGGAGTGCTCAGCTAGCGTaGCACCAGGACCTGGCACTA +
Preference number: 4 (lower is better)
Translates to: VSHRAGPGLHACWKWHAGSAQLA*HQDLAL
Trigger: TAGTGCCAGGTCCTGGTGCCACGCTAGCTGAGCACT...CCCAGCATGCCACTTCCAGCAGGCATGCAGTCCTGGCCCAGCTCTATGGGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR CAA 72 bp GCTGTAGCTGTGGGCTCCTCTCACGGGTCCTGGACCTaGGCCCTTTTGGCTTTCAGAGACAGGTGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: AVAVGSSHGSWT*ALLAFRDRCVP
Trigger: AGGAACGCACCTGTCTCTGAAAGCCAAAAGGGCCAAGGTCCAGGACCCGTGAGAGGAGCCCACAGCTACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp CCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCACTCTGCATAGAGGACTaGCGCAGGGTGTATGTGCAG +
Preference number: 4 (lower is better)
Translates to: PLCPLQHRRMPAHAQSPPLCIED*RRVYVQ
Trigger: CTGCACATACACCCTGCGTCAGTCCTCTATGCAGAG...TGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp AAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCCCTGGCACTACACTCTaGGAGGACGCTAAGCCTACC +
Preference number: 4 (lower is better)
Translates to: KWHAGLVSVLSEPTPTLPPGTTL*EDAKPT
Trigger: GGTAGGCTTAGCGTCCTCTCAGAGTGTAGTGCCAGG...GGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGGCAGCTTCTGCCTCTaGTGCTCTATGGAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: VSVLSEPTPTLPAAAQKDGSFCL*CSMERA
Trigger: TGCCCTTTCCATAGAGCAGCAGAGGCAGAAGCTGCC...ATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCGACGCAGGGTGTATGTaGAGCTCATGGTCATCACGG +
Preference number: 4 (lower is better)
Translates to: SHSARCSTEGCLPMHKVLDAGCM*SSWSSR
Trigger: CCGTGATGACCATGAGCTGCACATACACCCTGCGTC...GAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GGCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAAGACGCCAGCAGTCCCTaGAGCTGTAGCTGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GNKTSACWKNCPHALLQEDASSP*SCSCGL
Trigger: GAGCCCACAGCTACAGCTGCAGGGACTGCTGGCGTC...TTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGCACAGAAGGATGCCTaGCCATGCACAAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PLCPLQHRRMPAHAQSPPAQKDA*PCTKSS
Trigger: GGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGC...TGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCGCACAGAAGGATGCCTaGCCATGCACAAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SHSARCSTEGCLPMHKVLAQKDA*PCTKSS
Trigger: GGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGC...GAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGATCCCACTCTGCCCGCTaGAGCACAGAAGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: CTKSSRIPARMQMLWAAGSHSAR*STEGCL
Trigger: CAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGA...TCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGTCCCACTCTGCCCGCTaGAGCACAGAAGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: HAQSPPGSQQGCKCCGQRSHSAR*STEGCL
Trigger: CAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGA...CCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTGCCAGCTCACCCCATCCCACTCTGCCCGCTaGAGCACAGAAGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: SPLQSNQTFHRSWCQLTPSHSAR*STEGCL
Trigger: CAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGA...TGGGGTGAGCTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAAAGCCAACTCCCACTCTaGCCGCTGCAGCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: AQSPPGSQQGCKCCGQRESQLPL*PLQHRR
Trigger: CCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCT...TTCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGATGGGCCAGGACTGCATaGCTGCTGGAAGTGGCATGC +
Preference number: 4 (lower is better)
Translates to: CTKSSRIPARMQMLWAAGWARTA*LLEVAC
Trigger: GCATGCCACTTCCAGCAGGCATGCAGTCCTGGCCCA...TCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGCTGTGGCCCCAGCAGGAGCTGGGCCAGGACTaGATGCCTGCTGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: LFTPGSRPHWLTQLWPQQELGQD*MPAGSG
Trigger: GCCACTTCCAGCAGGCATGCAGTCCTGGCCCAGCTC...CTGCTGGGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCATGAACTCTCCTGAGTaGTCAGCTAGCGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: PTLPAAAQKDACPCTKSSMNSPE*SASVAP
Trigger: TGGTGCCACGCTAGCTGAGCACTCAGGAGAGTTCAT...GGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCGTCCCCACGCGCTCTTaGAAGAACCCAAGCAAACAA +
Preference number: 4 (lower is better)
Translates to: SEPTPTLPAAAQKDACPCVPTRS*KNPSKQ
Trigger: TTGTTTGCTTGGGTTCTTGCAAGAGCGCGTGGGGAC...GCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTGCCAGCTCACCCCACGGGCGCAGCCATGTTaGGGTAAAAGGTCACGAGGC +
Preference number: 4 (lower is better)
Translates to: SPLQSNQTFHRSWCQLTPRAQPC*GKRSRG
Trigger: GCCTCGTGACCTTTTACCCCAACATGGCTGCGCCCG...TGGGGTGAGCTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
CDS-3UTR CCA 90 bp CCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCGGGGGCGACATGAAGTaGAACCTGAGGACATTGTCA +
Preference number: 4 (lower is better)
Translates to: PTLPAAAQKDACPCTKSSGGDMK*NLRTLS
Trigger: TGACAATGTCCTCAGGTTCCACTTCATGTCGCCCCC...GGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
CDS-3UTR CCA 90 bp GTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATAACCATCGACTGTGCTaGAGGGGGCGACATGAAGTG +
Preference number: 4 (lower is better)
Translates to: VSVLSEPTPTLPAAAQKDNHRLC*RGRHEV
Trigger: CACTTCATGTCGCCCCCTCCAGCACAGTCGATGGTT...ATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
CDS-3UTR CCA 90 bp CTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTAACCATCGACTGTGCTaGAGGGGGCGACATGAAGTG +
Preference number: 4 (lower is better)
Translates to: LPLCPLQHRRMPAHAQSPNHRLC*RGRHEV
Trigger: CACTTCATGTCGCCCCCTCCAGCACAGTCGATGGTT...AGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
CDS-3UTR CCA 90 bp TGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGCCAGCTCACCCCACCTaGGACCAGGGGCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: CAHQTCPLVVSAEIPNVSPAHPT*DQGQQH
Trigger: ATGCTGCTGCCCCTGGTCCCAGGTGGGGTGAGCTGG...CGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGGACTGCATGCCTGCTaGAAGTGGCATGCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: VSVLSEPTPTLPAAAQKDGLHAC*KWHAGL
Trigger: TAACCCAGCATGCCACTTCCAGCAGGCATGCAGTCC...ATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCTCTGTCCACCCCACATaGTGTTTTGGCCTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: SEPTPTLPAAAQKDACPCSVHPT*CFGLQW
Trigger: CCACTGAAGGCCAAAACACCATGTGGGGTGGACAGA...GCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp GATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGAGTGAGCGTGCTGAGTaGGCCAACTCCCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: DACPCTKSSRIPARMQMLSERAE*ANSHSA
Trigger: GGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACT...CAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GTTTCCCATAGAGCTGGGCCAGGACTGCATGCCTGCTGGAAGTGGCATGCTGGGTGTCCAGCCGGCTTCTaGAAGGTACTGAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: VSHRAGPGLHACWKWHAGCPAGF*KVLRNL
Trigger: CAGATTCCTCAGTACCTTGCAGAAGCCGGCTGGACA...CCCAGCATGCCACTTCCAGCAGGCATGCAGTCCTGGCCCAGCTCTATGGGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp ACACCTGGCAGCAGACCTCATTGGTTAACACAGCTGTGGCCCCAGCAGGGAAAGCTCGTGGCCCAGCACTaGACCCCTTTCTTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: TPGSRPHWLTQLWPQQGKLVAQH*TPFFSY
Trigger: GTAGCTGAAGAAAGGGGTGCAGTGCTGGGCCACGAG...CTTTCCCTGCTGGGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGTGGCCAGCTGGTCGGTaGAGTCATCAAAGCGGATGC +
Preference number: 4 (lower is better)
Translates to: CSTEGCLPMHKVLQDPSKWPAGR*SHQSGC
Trigger: GCATCCGCTTTGATGACTGCACCGACCAGCTGGCCA...CTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTGCCAGCTCACCCCATGGCCAGCTGGTCGGTaGAGTCATCAAAGCGGATGC +
Preference number: 4 (lower is better)
Translates to: SPLQSNQTFHRSWCQLTPWPAGR*SHQSGC
Trigger: GCATCCGCTTTGATGACTGCACCGACCAGCTGGCCA...TGGGGTGAGCTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCTTGAACCATCGACTGTaGTGGAGGGGGCGACATGAA +
Preference number: 4 (lower is better)
Translates to: SHSARCSTEGCLPMHKVLLNHRL*WRGRHE
Trigger: TTCATGTCGCCCCCTCCAGCACAGTCGATGGTTCAA...GAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
CDS-3UTR GCA 90 bp CCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGAATGAAACCTCGCTaGATTGGCGAAGAAGCCGGA +
Preference number: 4 (lower is better)
Translates to: PTLPAAAQKDACPCTKSSRMKPR*IGEEAG
Trigger: TCCGGCTTCTTCGCCAATGCAGCGAGGTTTCATTCT...GGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCGGATCCCAGCAAGGATaGAAATGCTGTGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LPMHKVLQDPSKDANAVGGSQQG*KCCGQR
Trigger: CCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCC...GCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGGATCCCAGCAAGGATaGAAATGCTGTGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: CSTEGCLPMHKVLQDPSKGSQQG*KCCGQR
Trigger: CCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCC...CTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGTCCCACTCTGCCCGCTaGAGCACAGAAGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: GLQWLTFLLVSHRAGPGLSHSAR*STEGCL
Trigger: CAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGA...CAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCCAAGAGCCAACTCCCACTCTaGCCGCTGCAGCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: KTSACWKNCPHALLQEPKSQLPL*PLQHRR
Trigger: CCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCT...CTTGGGTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGCATGCCCCAGGACTGCATGCCTaGTGGAAGTGGCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: QWLTFLLVSHRAGPGLHAPGLHA*WKWHAG
Trigger: CCCAGCATGCCACTTCCAGCAGGCATGCAGTCCTGG...GGCATGCAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCCAATCACCAATCCCTTaGAAGTCTCCTGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SEPTPTLPAAAQKDACPCQSPIP*KSPGCR
Trigger: TCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTG...GCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTGGGCAACAAAACCAGTaGCTGCTGGAAGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: LPLCPLQHRRMPAHAQSPGQQNQ*LLEELS
Trigger: GGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGCCC...AGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAAAGAGATGCTTACACCTaGCCCCTCTGTACCGGGTCG +
Preference number: 4 (lower is better)
Translates to: AQSPPGSQQGCKCCGQRERDAYT*PLCTGS
Trigger: CGACCCGGTACAGAGGGGCCAGGTGTAAGCATCTCT...TTCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCGCCTCTGCTGCTCTATaGAAAGGGCAGCATAAGGGT +
Preference number: 4 (lower is better)
Translates to: SHSARCSTEGCLPMHKVLASAAL*KGQHKG
Trigger: ACCCTTATGCTGCCCTTTCCATAGAGCAGCAGAGGC...GAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTATTCTCGTGGCCAGCTaGTCGGTGCAGTCATCAAAG +
Preference number: 4 (lower is better)
Translates to: LPLCPLQHRRMPAHAQSPILVAS*SVQSSK
Trigger: CTTTGATGACTGCACCGACCAGCTGGCCACGAGAAT...AGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGAACCATCGACTGTGCTaGAGGGGGCGACATGAAGTG +
Preference number: 4 (lower is better)
Translates to: LVSVLSEPTPTLPAAAQKNHRLC*RGRHEV
Trigger: CACTTCATGTCGCCCCCTCCAGCACAGTCGATGGTT...CTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
CDS-3UTR CCA 90 bp GAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATCCTCTCACGGGTCCTaGACCTTGGCCCTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: ETLCPSDMPFGGFGRDPQSSHGS*TLALLA
Trigger: AGCCAAAAGGGCCAAGGTCCAGGACCCGTGAGAGGA...TTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GTCAATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGCCAGCTCACCCCACCTaGGACCAGGGGCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: VNHQSLASLLAADKQGQGPAHPT*DQGQQH
Trigger: ATGCTGCTGCCCCTGGTCCCAGGTGGGGTGAGCTGG...CCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAACATTCCACAGGAGCTaGTGCCAGCTCACCCCACCT +
Preference number: 4 (lower is better)
Translates to: CTKSSRIPARMQMLWAAGTFHRS*CQLTPP
Trigger: AGGTGGGGTGAGCTGGCACCAGCTCCTGTGGAATGT...TCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGACATTCCACAGGAGCTaGTGCCAGCTCACCCCACCT +
Preference number: 4 (lower is better)
Translates to: HAQSPPGSQQGCKCCGQRTFHRS*CQLTPP
Trigger: AGGTGGGGTGAGCTGGCACCAGCTCCTGTGGAATGT...CCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGCTGGAAGTGGCATGCTaGGTTAGTGAGCGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LVSVLSEPTPTLPAAAQKLEVAC*VSERAE
Trigger: CTCAGCACGCTCACTAACCCAGCATGCCACTTCCAG...CTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TCTGAGCTGATGAACTCTCCTGAGTGCTCAGCTAGCGTGGCACCAGGACCTGGCGGACTGCATGCCTGCTaGAAGTGGCATGCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: SELMNSPECSASVAPGPGGLHAC*KWHAGL
Trigger: TAACCCAGCATGCCACTTCCAGCAGGCATGCAGTCC...GCCAGGTCCTGGTGCCACGCTAGCTGAGCACTCAGGAGAGTTCATCAGCTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp ACAGGCCGCAGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTGCCAGACAGACAGAAGCCACTaGGTTTGGGAGACCCTGTGC +
Preference number: 4 (lower is better)
Translates to: TGRSPLQSNQTFHRSWCQTDRSH*VWETLC
Trigger: GCACAGGGTCTCCCAAACCCAGTGGCTTCTGTCTGT...CTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCTGCGGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp ACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCCCCTTGCAAGTCTCCTaGCTGCAGATAAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: TPTLPAAAQKDACPCTKSPLQVS*LQINRD
Trigger: GTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGG...GGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGCGTGGCACCAGGACCTaGCACTACACTCTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: HAQSPPGSQQGCKCCGQRRGTRT*HYTLRG
Trigger: TCCTCTCAGAGTGTAGTGCCAGGTCCTGGTGCCACG...CCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GGATCTGAGCTGATGAACTCTCCTGAGTGCTCAGCTAGCGTGGCACCAGGACCTCGTGGCACCAGGACCTaGCACTACACTCTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GSELMNSPECSASVAPGPRGTRT*HYTLRG
Trigger: TCCTCTCAGAGTGTAGTGCCAGGTCCTGGTGCCACG...AGGTCCTGGTGCCACGCTAGCTGAGCACTCAGGAGAGTTCATCAGCTCAGATCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGTGCTCAGCTAGCGTaGCACCAGGACCTGGCACTA +
Preference number: 4 (lower is better)
Translates to: LPMHKVLQDPSKDANAVGSAQLA*HQDLAL
Trigger: TAGTGCCAGGTCCTGGTGCCACGCTAGCTGAGCACT...GCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGGGAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCACAGCAAAGCAGCCCTaGGGCAACAAAACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: WETLCPSDMPFGGFGRDPTAKQP*GNKTSA
Trigger: GGCACTGGTTTTGTTGCCCCAGGGCTGCTTTGCTGT...GGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp GTTTCCCATAGAGCTGGGCCAGGACTGCATGCCTGCTGGAAGTGGCATGCTGGGGCTTCTGCAAGGTACTaGGGAATCTGTGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: VSHRAGPGLHACWKWHAGASARY*GICVLF
Trigger: GAAGAGCACACAGATTCCTCAGTACCTTGCAGAAGC...CCCAGCATGCCACTTCCAGCAGGCATGCAGTCCTGGCCCAGCTCTATGGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp CCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCATCAGGAACCGTAGACTaGGGCAACTTGTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: PLCPLQHRRMPAHAQSPPSGTVD*GNLSKA
Trigger: AGCCTTTGACAAGTTGCCTCAGTCTACGGTTCCTGA...TGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGTCTCTCTTCAGAGATaGTTACACCTGGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LVSVLSEPTPTLPAAAQKVSLQR*LHLAPL
Trigger: CAGAGGGGCCAGGTGTAAGCATCTCTGAAGAGAGAC...CTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGCTCGTGGCCCAGCACTaGACCCCTTTCTTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: GLQWLTFLLVSHRAGPGLLVAQH*TPFFSY
Trigger: GTAGCTGAAGAAAGGGGTGCAGTGCTGGGCCACGAG...CAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGCTGTGGCCCCAGCAGTGGCCAGCTGGTCGGTaGAGTCATCAAAGCGGATGC +
Preference number: 4 (lower is better)
Translates to: LFTPGSRPHWLTQLWPQQWPAGR*SHQSGC
Trigger: GCATCCGCTTTGATGACTGCACCGACCAGCTGGCCA...CTGCTGGGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGCTGGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTGCTAGTGCTCGAGCCTaGTCGATGAGCATCGACACA +
Preference number: 4 (lower is better)
Translates to: CWKWHAGLVSVLSEPTPTASARA*SMSIDT
Trigger: TGTGTCGATGCTCATCGAGCAGGCTCGAGCACTAGC...AGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGTCTCTTCATCCCAGTaGGAGCTAGTGCTCGAGCCT +
Preference number: 4 (lower is better)
Translates to: HAQSPPGSQQGCKCCGQRVSSSQ*ELVLEP
Trigger: AGGCTCGAGCACTAGCTCGCACTGGGATGAAGAGAC...CCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCGTCTCTTCATCCCAGTaGGAGCTAGTGCTCGAGCCT +
Preference number: 4 (lower is better)
Translates to: LPMHKVLQDPSKDANAVGVSSSQ*ELVLEP
Trigger: AGGCTCGAGCACTAGCTCGCACTGGGATGAAGAGAC...GCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCAAAGGAAGGCAGTCCTaGATACATGGGGAGAACTCG +
Preference number: 4 (lower is better)
Translates to: SHSARCSTEGCLPMHKVLKGRQS*IHGENS
Trigger: CGAGTTCTCCCCATGTATGCAGGACTGCCTTCCTTT...GAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACTCTGCAATTCTCATaGCAAGCGGTTCAGTTAGGC +
Preference number: 4 (lower is better)
Translates to: SEPTPTLPAAAQKDACPCTLQFS*QAVQLG
Trigger: GCCTAACTGAACCGCTTGGCATGAGAATTGCAGAGT...GCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp ACAGGCCGCAGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTGCCAGAGAAGCCGGAGACAATaGACCTCAGAACCAGATCCG +
Preference number: 4 (lower is better)
Translates to: TGRSPLQSNQTFHRSWCQRSRRQ*TSEPDP
Trigger: CGGATCTGGTTCTGAGGTGCATTGTCTCCGGCTTCT...CTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCTGCGGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp ACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCAGAATGAAACCTCGCTaGATTGGCGAAGAAGCCGGA +
Preference number: 4 (lower is better)
Translates to: TPTLPAAAQKDACPCTKSRMKPR*IGEEAG
Trigger: TCCGGCTTCTTCGCCAATGCAGCGAGGTTTCATTCT...GGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp ACAGGCCGCAGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTGCCAGAAGGATGCCTGCCCATaGACAAAGTCCTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: TGRSPLQSNQTFHRSWCQKDACP*TKSSRI
Trigger: GATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTT...CTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCTGCGGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAGCACAGAAGGATGCCTaGCCATGCACAAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: CTKSSRIPARMQMLWAAGAQKDA*PCTKSS
Trigger: GGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGC...TCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGCACAGAAGGATGCCTaGCCATGCACAAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: HAQSPPGSQQGCKCCGQRAQKDA*PCTKSS
Trigger: GGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGC...CCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCTGCAGCACAGAAGGATaGCTGCCCATGCACAAAGTC +
Preference number: 4 (lower is better)
Translates to: KWHAGLVSVLSEPTPTLPCSTEG*LPMHKV
Trigger: GACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCA...GGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp ATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTTGGGCCAGGACTGCATaGCTGCTGGAAGTGGCATGC +
Preference number: 4 (lower is better)
Translates to: MPAHAQSPPGSQQGCKCCWARTA*LLEVAC
Trigger: GCATGCCACTTCCAGCAGGCATGCAGTCCTGGCCCA...ACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCGAGCTGGGCCAGGACTaGATGCCTGCTGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: VHPTWCFGLQWLTFLLVSELGQD*MPAGSG
Trigger: GCCACTTCCAGCAGGCATGCAGTCCTGGCCCAGCTC...GGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGCTGGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTTTGAACCATCGACTGTaGTGGAGGGGGCTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: CWKWHAGLVSVLSEPTPTLNHRL*WRGLVW
Trigger: CCAGACAAGCCCCCTCCAGCACAGTCGATGGTTCAA...AGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652169.1
CDS-3UTR CCA 90 bp CATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGCCACTCTTCGAGGCTaGGTCACTCCTACCACTCTT +
Preference number: 4 (lower is better)
Translates to: HAQSPPGSQQGCKCCGQRATLRG*VTPTTL
Trigger: AAGAGTGGTAGGAGTGACCCAGCCTCGAAGAGTGGC...CCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTGCCAGCTCACCCCAGCCACTCTTCGAGGCTaGGTCACTCCTACCACTCTT +
Preference number: 4 (lower is better)
Translates to: SPLQSNQTFHRSWCQLTPATLRG*VTPTTL
Trigger: AAGAGTGGTAGGAGTGACCCAGCCTCGAAGAGTGGC...TGGGGTGAGCTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TCTGAGCTGATGAACTCTCCTGAGTGCTCAGCTAGCGTGGCACCAGGACCTGGCATTCTCGTGGCCAGCTaGTCGGTGCAGTCATCAAAG +
Preference number: 4 (lower is better)
Translates to: SELMNSPECSASVAPGPGILVAS*SVQSSK
Trigger: CTTTGATGACTGCACCGACCAGCTGGCCACGAGAAT...GCCAGGTCCTGGTGCCACGCTAGCTGAGCACTCAGGAGAGTTCATCAGCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCGCAGTCCTGCATACATaGGGAGAACTCGGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: HRRMPAHAQSPPGSQQGCAVLHT*GELGGV
Trigger: GACACCTCCGAGTTCTCCCCATGTATGCAGGACTGC...GCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAGCAGTCCTGCATACATaGGGAGAACTCGGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: CTKSSRIPARMQMLWAAGAVLHT*GELGGV
Trigger: GACACCTCCGAGTTCTCCCCATGTATGCAGGACTGC...TCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp ACAGGCCGCAGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTGCCAGGGGGGCGACATGAAGTaGAACCTGAGGACATTGTCA +
Preference number: 4 (lower is better)
Translates to: TGRSPLQSNQTFHRSWCQGGDMK*NLRTLS
Trigger: TGACAATGTCCTCAGGTTCCACTTCATGTCGCCCCC...CTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCTGCGGCCTGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
CDS-3UTR CCA 90 bp AGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTGCCAGCTCACCCCATTGAGCATAGTGAGGTaGTCGCCCTCCTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: SPLQSNQTFHRSWCQLTPLSIVR*SPSSTA
Trigger: TGCTGTGGAGGAGGGCGACCACCTCACTATGCTCAA...TGGGGTGAGCTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp ACACCTGGCAGCAGACCTCATTGGTTAACACAGCTGTGGCCCCAGCAGGGAAAGTTGAGCATAGTGAGGTaGTCGCCCTCCTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: TPGSRPHWLTQLWPQQGKLSIVR*SPSSTA
Trigger: TGCTGTGGAGGAGGGCGACCACCTCACTATGCTCAA...CTTTCCCTGCTGGGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCTGTATGTGCAGCTCATaGTCATCACGGATGGTCCTA +
Preference number: 4 (lower is better)
Translates to: SEPTPTLPAAAQKDACPCCMCSS*SSRMVL
Trigger: TAGGACCATCCGTGATGACCATGAGCTGCACATACA...GCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCGCCAGGCCGATTCAATaGCAGTCACATCTCTCATGT +
Preference number: 4 (lower is better)
Translates to: SHSARCSTEGCLPMHKVLARPIQ*QSHLSC
Trigger: ACATGAGAGATGTGACTGCCATTGAATCGGCCTGGC...GAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGCTGGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTGGACCTTGGCCCTTTTaGCTTTCAGAGACAGGTGCG +
Preference number: 4 (lower is better)
Translates to: CWKWHAGLVSVLSEPTPTGPWPF*LSETGA
Trigger: CGCACCTGTCTCTGAAAGCCAAAAGGGCCAAGGTCC...AGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAGGACCTTGGCCCTTTTaGCTTTCAGAGACAGGTGCG +
Preference number: 4 (lower is better)
Translates to: CTKSSRIPARMQMLWAAGGPWPF*LSETGA
Trigger: CGCACCTGTCTCTGAAAGCCAAAAGGGCCAAGGTCC...TCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTGCCAGCTCACCCCAGGACCTTGGCCCTTTTaGCTTTCAGAGACAGGTGCG +
Preference number: 4 (lower is better)
Translates to: SPLQSNQTFHRSWCQLTPGPWPF*LSETGA
Trigger: CGCACCTGTCTCTGAAAGCCAAAAGGGCCAAGGTCC...TGGGGTGAGCTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GGATCTGAGCTGATGAACTCTCCTGAGTGCTCAGCTAGCGTGGCACCAGGACCTGGACCTTGGCCCTTTTaGCTTTCAGAGACAGGTGCG +
Preference number: 4 (lower is better)
Translates to: GSELMNSPECSASVAPGPGPWPF*LSETGA
Trigger: CGCACCTGTCTCTGAAAGCCAAAAGGGCCAAGGTCC...AGGTCCTGGTGCCACGCTAGCTGAGCACTCAGGAGAGTTCATCAGCTCAGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAACGGGTCCTGGACCTTaGCCCTTTTGGCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: CTKSSRIPARMQMLWAAGTGPGP*PFWLSE
Trigger: CTCTGAAAGCCAAAAGGGCCAAGGTCCAGGACCCGT...TCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGACGGGTCCTGGACCTTaGCCCTTTTGGCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: CSTEGCLPMHKVLQDPSKTGPGP*PFWLSE
Trigger: CTCTGAAAGCCAAAAGGGCCAAGGTCCAGGACCCGT...CTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCCAAGTCCTCTCACGGGTCCTaGACCTTGGCCCTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: KTSACWKNCPHALLQEPKSSHGS*TLALLA
Trigger: AGCCAAAAGGGCCAAGGTCCAGGACCCGTGAGAGGA...CTTGGGTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTCCTCTCACGGGTCCTaGACCTTGGCCCTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: DACPCTKSSRIPARMQMLSSHGS*TLALLA
Trigger: AGCCAAAAGGGCCAAGGTCCAGGACCCGTGAGAGGA...CAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTTCCTCTCACGGGTCCTaGACCTTGGCCCTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: GCLPMHKVLQDPSKDANASSHGS*TLALLA
Trigger: AGCCAAAAGGGCCAAGGTCCAGGACCCGTGAGAGGA...AGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGCTGGAAGTGGCATGCTaGGTTAGTGAGCGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: CSTEGCLPMHKVLQDPSKLEVAC*VSERAE
Trigger: CTCAGCACGCTCACTAACCCAGCATGCCACTTCCAG...CTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GGATCTGAGCTGATGAACTCTCCTGAGTGCTCAGCTAGCGTGGCACCAGGACCTCTGGAAGTGGCATGCTaGGTTAGTGAGCGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: GSELMNSPECSASVAPGPLEVAC*VSERAE
Trigger: CTCAGCACGCTCACTAACCCAGCATGCCACTTCCAG...AGGTCCTGGTGCCACGCTAGCTGAGCACTCAGGAGAGTTCATCAGCTCAGATCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCAGACATGCCCTTTGGTaGTTTCGGCAGAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: KWHAGLVSVLSEPTPTLPRHALW*FRQRSP
Trigger: TGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCT...GGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGAGACATGCCCTTTGGTaGTTTCGGCAGAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: LVSVLSEPTPTLPAAAQKRHALW*FRQRSP
Trigger: TGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCT...CTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp ACAGGCCGCAGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTGCCAGCCCTTGCAAGTCTCCTaGCTGCAGATAAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: TGRSPLQSNQTFHRSWCQPLQVS*LQINRD
Trigger: GTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGG...CTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCTGCGGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCCCCTTGCAAGTCTCCTaGCTGCAGATAAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: KWHAGLVSVLSEPTPTLPPLQVS*LQINRD
Trigger: GTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGG...GGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GCGAAGAAGCCGGAGACAATGCACCTCAGAACCAGATCCGGGTCACCTTCACTAAGTGCTCAGCTAGCGTaGCACCAGGACCTGGCACTA +
Preference number: 4 (lower is better)
Translates to: AKKPETMHLRTRSGSPSLSAQLA*HQDLAL
Trigger: TAGTGCCAGGTCCTGGTGCCACGCTAGCTGAGCACT...TAGTGAAGGTGACCCGGATCTGGTTCTGAGGTGCATTGTCTCCGGCTTCTTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGCATGCCAGTGCTCAGCTAGCGTaGCACCAGGACCTGGCACTA +
Preference number: 4 (lower is better)
Translates to: QWLTFLLVSHRAGPGLHASAQLA*HQDLAL
Trigger: TAGTGCCAGGTCCTGGTGCCACGCTAGCTGAGCACT...GGCATGCAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp CTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTTCTCCCTCTGTCTGGTaGATTTTCACCACAGTTTCG +
Preference number: 4 (lower is better)
Translates to: LPLCPLQHRRMPAHAQSPSPSVW*IFTTVS
Trigger: CGAAACTGTGGTGAAAATTCACCAGACAGAGGGAGA...AGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp GTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATTCTCCCTCTGTCTGGTaGATTTTCACCACAGTTTCG +
Preference number: 4 (lower is better)
Translates to: VSVLSEPTPTLPAAAQKDSPSVW*IFTTVS
Trigger: CGAAACTGTGGTGAAAATTCACCAGACAGAGGGAGA...ATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp GCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAACTCGAGCCTGCTCGATaGGCATCGACACAACAGTTT +
Preference number: 4 (lower is better)
Translates to: AQSPPGSQQGCKCCGQRELEPAR*ASTQQF
Trigger: AAACTGTTGTGTCGATGCTCATCGAGCAGGCTCGAG...TTCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGCCACTATCACCTTTCTaGCACTGCGTGACACCCTTT +
Preference number: 4 (lower is better)
Translates to: LVSVLSEPTPTLPAAAQKPLSPF*HCVTPF
Trigger: AAAGGGTGTCACGCAGTGTCAGAAAGGTGATAGTGG...CTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp AAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCTCAGGAACCGTAGACTaGGGCAACTTGTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: KWHAGLVSVLSEPTPTLPSGTVD*GNLSKA
Trigger: AGCCTTTGACAAGTTGCCTCAGTCTACGGTTCCTGA...GGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp GTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATCTTTCAGCTGCAGGATaGCAGGTGCCAAATTACTAC +
Preference number: 4 (lower is better)
Translates to: VSVLSEPTPTLPAAAQKDLSAAG*QVPNYY
Trigger: GTAGTAATTTGGCACCTGTCATCCTGCAGCTGAAAG...ATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp GGCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACTCTGCATAGAGGACTaGCGCAGGGTGTATGTGCAG +
Preference number: 4 (lower is better)
Translates to: GNKTSACWKNCPHALLQELCIED*RRVYVQ
Trigger: CTGCACATACACCCTGCGTCAGTCCTCTATGCAGAG...TTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252011.8
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp GTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCAGTGAGCGTGCTGAGTaGGCCAACTCCCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: VHPTWCFGLQWLTFLLVSSERAE*ANSHSA
Trigger: GGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACT...GGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TCCAGTAGAATGAAACCTCGCTGCATTGGCGAAGAAGCCGGAGACAATGCACCTAGTGAGCGTGCTGAGTaGGCCAACTCCCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: SSRMKPRCIGEEAGDNAPSERAE*ANSHSA
Trigger: GGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACT...AGGTGCATTGTCTCCGGCTTCTTCGCCAATGCAGCGAGGTTTCATTCTACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GGATCTGAGCTGATGAACTCTCCTGAGTGCTCAGCTAGCGTGGCACCAGGACCTGTCTCTCTTCAGAGATaGTTACACCTGGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: GSELMNSPECSASVAPGPVSLQR*LHLAPL
Trigger: CAGAGGGGCCAGGTGTAAGCATCTCTGAAGAGAGAC...AGGTCCTGGTGCCACGCTAGCTGAGCACTCAGGAGAGTTCATCAGCTCAGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp ACAGGCCGCAGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTGCCAGAATACCGGCAGCTTCTaGCTCTGCTGCTCTATGGAA +
Preference number: 4 (lower is better)
Translates to: TGRSPLQSNQTFHRSWCQNTGSF*LCCSME
Trigger: TTCCATAGAGCAGCAGAGGCAGAAGCTGCCGGTATT...CTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCTGCGGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGCTGGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTTGTCCAGCCGGCTTCTaGAAGGTACTGAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: CWKWHAGLVSVLSEPTPTCPAGF*KVLRNL
Trigger: CAGATTCCTCAGTACCTTGCAGAAGCCGGCTGGACA...AGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGGCTAGTGCTCGAGCCTaGTCGATGAGCATCGACACA +
Preference number: 4 (lower is better)
Translates to: DACPCTKSSRIPARMQMLASARA*SMSIDT
Trigger: TGTGTCGATGCTCATCGAGCAGGCTCGAGCACTAGC...CAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TCTGAGCTGATGAACTCTCCTGAGTGCTCAGCTAGCGTGGCACCAGGACCTGGCAAAGGAAGGCAGTCCTaGATACATGGGGAGAACTCG +
Preference number: 4 (lower is better)
Translates to: SELMNSPECSASVAPGPGKGRQS*IHGENS
Trigger: CGAGTTCTCCCCATGTATGCAGGACTGCCTTCCTTT...GCCAGGTCCTGGTGCCACGCTAGCTGAGCACTCAGGAGAGTTCATCAGCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTGCCAAATTACTACGCTaGATCTCAGGAACCGTAGAC +
Preference number: 4 (lower is better)
Translates to: LPLCPLQHRRMPAHAQSPAKLLR*ISGTVD
Trigger: GTCTACGGTTCCTGAGATGCAGCGTAGTAATTTGGC...AGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAATTGAACCATCGACTGTaGTGGAGGGGGCGACATGAA +
Preference number: 4 (lower is better)
Translates to: AQSPPGSQQGCKCCGQRELNHRL*WRGRHE
Trigger: TTCATGTCGCCCCCTCCAGCACAGTCGATGGTTCAA...TTCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
CDS-3UTR GCA 90 bp CTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCTTGAACCATCGACTGTaGTGGAGGGGGCGACATGAA +
Preference number: 4 (lower is better)
Translates to: LPMHKVLQDPSKDANAVGLNHRL*WRGRHE
Trigger: TTCATGTCGCCCCCTCCAGCACAGTCGATGGTTCAA...GCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
CDS-3UTR GCA 90 bp CATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGAGAAGCCGGAGACAATaGACCTCAGAACCAGATCCG +
Preference number: 4 (lower is better)
Translates to: HAQSPPGSQQGCKCCGQRRSRRQ*TSEPDP
Trigger: CGGATCTGGTTCTGAGGTGCATTGTCTCCGGCTTCT...CCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGAGAAGCCGGAGACAATaGACCTCAGAACCAGATCCG +
Preference number: 4 (lower is better)
Translates to: CSTEGCLPMHKVLQDPSKRSRRQ*TSEPDP
Trigger: CGGATCTGGTTCTGAGGTGCATTGTCTCCGGCTTCT...CTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AACCTCGCTGCATTGGCGAAGAAGCCGGAGACAATGCACCTCAGAACCAGATCCGACGCAGGGTGTATGTaGAGCTCATGGTCATCACGG +
Preference number: 4 (lower is better)
Translates to: NLAALAKKPETMHLRTRSDAGCM*SSWSSR
Trigger: CCGTGATGACCATGAGCTGCACATACACCCTGCGTC...GGATCTGGTTCTGAGGTGCATTGTCTCCGGCTTCTTCGCCAATGCAGCGAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGAGACGACGCCAGCAGTCCCTaGAGCTGTAGCTGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: CPLVVSAEIPNVSFIRRDDASSP*SCSCGL
Trigger: GAGCCCACAGCTACAGCTGCAGGGACTGCTGGCGTC...GTCTCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CTGTCCTGGGATTGTAGGCTCGGAGTTTCACAAAGCCACAGTCGATCACATACAGACGCCAGCAGTCCCTaGAGCTGTAGCTGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LSWDCRLGVSQSHSRSHTDASSP*SCSCGL
Trigger: GAGCCCACAGCTACAGCTGCAGGGACTGCTGGCGTC...TGTATGTGATCGACTGTGGCTTTGTGAAACTCCGAGCCTACAATCCCAGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp ATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGATCCCAGCAAGGATaGAAATGCTGTGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: MPAHAQSPPGSQQGCKCCGSQQG*KCCGQR
Trigger: CCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCC...ACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGCTGGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTAAGGATGCCTGCCCATaGACAAAGTCCTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: CWKWHAGLVSVLSEPTPTKDACP*TKSSRI
Trigger: GATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTT...AGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAAAAGGATGCCTGCCCATaGACAAAGTCCTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: AQSPPGSQQGCKCCGQREKDACP*TKSSRI
Trigger: GATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTT...TTCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCTGCTGGAAGTGGCATaGTGGGTTAGTGAGCGTGCT +
Preference number: 4 (lower is better)
Translates to: ATKPVPAGRTVPTRSCKNLLEVA*WVSERA
Trigger: AGCACGCTCACTAACCCAGCATGCCACTTCCAGCAG...GTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTCTGCTGGAAGTGGCATaGTGGGTTAGTGAGCGTGCT +
Preference number: 4 (lower is better)
Translates to: GCLPMHKVLQDPSKDANALLEVA*WVSERA
Trigger: AGCACGCTCACTAACCCAGCATGCCACTTCCAGCAG...AGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GCGAAGAAGCCGGAGACAATGCACCTCAGAACCAGATCCGGGTCACCTTCACTACTGCTGGAAGTGGCATaGTGGGTTAGTGAGCGTGCT +
Preference number: 4 (lower is better)
Translates to: AKKPETMHLRTRSGSPSLLLEVA*WVSERA
Trigger: AGCACGCTCACTAACCCAGCATGCCACTTCCAGCAG...TAGTGAAGGTGACCCGGATCTGGTTCTGAGGTGCATTGTCTCCGGCTTCTTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGCTGCCAGGACTGCATGCCTaGTGGAAGTGGCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: NHQSLASLLAADKQGQGLPGLHA*WKWHAG
Trigger: CCCAGCATGCCACTTCCAGCAGGCATGCAGTCCTGG...CAGCCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGCTGTGGGCCAGGACTGCATaGCTGCTGGAAGTGGCATGC +
Preference number: 4 (lower is better)
Translates to: NHQSLASLLAADKQGQGLWARTA*LLEVAC
Trigger: GCATGCCACTTCCAGCAGGCATGCAGTCCTGGCCCA...CAGCCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATTCATTCGTAGAGACATaGTTGTTCACACCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VSVLSEPTPTLPAAAQKDSFVET*LFTPGS
Trigger: GCTGCCAGGTGTGAACAAGCATGTCTCTACGAATGA...ATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAAATGAACTCTCCTGAGTaGTCAGCTAGCGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: ETLCPSDMPFGGFGRDPQMNSPE*SASVAP
Trigger: TGGTGCCACGCTAGCTGAGCACTCAGGAGAGTTCAT...TTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCGTCCCCACGCGCTCTTaGAAGAACCCAAGCAAACAA +
Preference number: 4 (lower is better)
Translates to: HRRMPAHAQSPPGSQQGCVPTRS*KNPSKQ
Trigger: TTGTTTGCTTGGGTTCTTGCAAGAGCGCGTGGGGAC...GCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGAACAAAACCAGTGCCTaGTGGAAGAACTGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LVSVLSEPTPTLPAAAQKNKTSA*WKNCPH
Trigger: GTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTT...CTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp ATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTAGAGATGCTTACACCTaGCCCCTCTGTACCGGGTCG +
Preference number: 4 (lower is better)
Translates to: MPAHAQSPPGSQQGCKCCRDAYT*PLCTGS
Trigger: CGACCCGGTACAGAGGGGCCAGGTGTAAGCATCTCT...ACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAGCCTCTGCTGCTCTATaGAAAGGGCAGCATAAGGGT +
Preference number: 4 (lower is better)
Translates to: CTKSSRIPARMQMLWAAGASAAL*KGQHKG
Trigger: ACCCTTATGCTGCCCTTTCCATAGAGCAGCAGAGGC...TCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGCCACTCTTCGAGGCTaGGTCACTCCTACCACTCTT +
Preference number: 4 (lower is better)
Translates to: GCLPMHKVLQDPSKDANAATLRG*VTPTTL
Trigger: AAGAGTGGTAGGAGTGACCCAGCCTCGAAGAGTGGC...AGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCTACAAGGTCCTCTCGTaGGCTTCATCCAGCATGATG +
Preference number: 4 (lower is better)
Translates to: KWHAGLVSVLSEPTPTLPYKVLS*ASSSMM
Trigger: CATCATGCTGGATGAAGCCCACGAGAGGACCTTGTA...GGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GGCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAAGCAGTCCTGCATACATaGGGAGAACTCGGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: GNKTSACWKNCPHALLQEAVLHT*GELGGV
Trigger: GACACCTCCGAGTTCTCCCCATGTATGCAGGACTGC...TTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp ACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCAGGTTTCTGCCACATTaGTGGCCACTATCACCTTTC +
Preference number: 4 (lower is better)
Translates to: TPTLPAAAQKDACPCTKSRFLPH*WPLSPF
Trigger: GAAAGGTGATAGTGGCCACCAATGTGGCAGAAACCT...GGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAAGGGGGCGACATGAAGTaGAACCTGAGGACATTGTCA +
Preference number: 4 (lower is better)
Translates to: AQSPPGSQQGCKCCGQREGGDMK*NLRTLS
Trigger: TGACAATGTCCTCAGGTTCCACTTCATGTCGCCCCC...TTCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
CDS-3UTR CCA 90 bp CCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCGTGAGACTTCTGGTTTaGGGGGACCACAAAGATATT +
Preference number: 4 (lower is better)
Translates to: PTLPAAAQKDACPCTKSSVRLLV*GDHKDI
Trigger: AATATCTTTGTGGTCCCCCCAAACCAGAAGTCTCAC...GGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACTTGAGCATAGTGAGGTaGTCGCCCTCCTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: ATKPVPAGRTVPTRSCKNLSIVR*SPSSTA
Trigger: TGCTGTGGAGGAGGGCGACCACCTCACTATGCTCAA...GTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGTTGAGCATAGTGAGGTaGTCGCCCTCCTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: GLQWLTFLLVSHRAGPGLLSIVR*SPSSTA
Trigger: TGCTGTGGAGGAGGGCGACCACCTCACTATGCTCAA...CAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCTTGTTGATAAAAGTGTaGAGCCAGCTCCAACAGCCA +
Preference number: 4 (lower is better)
Translates to: SEPTPTLPAAAQKDACPCLLIKV*SQLQQP
Trigger: TGGCTGTTGGAGCTGGCTCCACACTTTTATCAACAA...GCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GGACTGACGCAGGGTGTATGTGCAGCTCATGGTCATCACGGATGGTCCTATAAGACATTCCACAGGAGCTaGTGCCAGCTCACCCCACCT +
Preference number: 4 (lower is better)
Translates to: GLTQGVCAAHGHHGWSYKTFHRS*CQLTPP
Trigger: AGGTGGGGTGAGCTGGCACCAGCTCCTGTGGAATGT...CTTATAGGACCATCCGTGATGACCATGAGCTGCACATACACCCTGCGTCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATCTGGAAGTGGCATGCTaGGTTAGTGAGCGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: STEGCLPMHKVLQDPSKDLEVAC*VSERAE
Trigger: CTCAGCACGCTCACTAACCCAGCATGCCACTTCCAG...ATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGGACTGCATGCCTGCTaGAAGTGGCATGCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: GCLPMHKVLQDPSKDANAGLHAC*KWHAGL
Trigger: TAACCCAGCATGCCACTTCCAGCAGGCATGCAGTCC...AGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGGCAGCAGACCTCATTaGTTAACACAGCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: STEGCLPMHKVLQDPSKDGSRPH*LTQLWP
Trigger: GGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCC...ATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGGCAGCAGACCTCATTaGTTAACACAGCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GCLPMHKVLQDPSKDANAGSRPH*LTQLWP
Trigger: GGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCC...AGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGCTGGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCCCTTGCAAGTCTCCTaGCTGCAGATAAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: CWKWHAGLVSVLSEPTPTPLQVS*LQINRD
Trigger: GTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGG...AGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp CTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCGCTTCTGCAAGGTACTaGGGAATCTGTGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LPMHKVLQDPSKDANAVGASARY*GICVLF
Trigger: GAAGAGCACACAGATTCCTCAGTACCTTGCAGAAGC...GCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TCTGAGCTGATGAACTCTCCTGAGTGCTCAGCTAGCGTGGCACCAGGACCTGGCTGCATCCAGAGTGGCTaGAGCTACAATCAATCGAAG +
Preference number: 4 (lower is better)
Translates to: SELMNSPECSASVAPGPGCIQSG*SYNQSK
Trigger: CTTCGATTGATTGTAGCTTCAGCCACTCTGGATGCA...GCCAGGTCCTGGTGCCACGCTAGCTGAGCACTCAGGAGAGTTCATCAGCTCAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TGGGAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCTCTCCCTCTGTCTGGTaGATTTTCACCACAGTTTCG +
Preference number: 4 (lower is better)
Translates to: WETLCPSDMPFGGFGRDPSPSVW*IFTTVS
Trigger: CGAAACTGTGGTGAAAATTCACCAGACAGAGGGAGA...GGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp AGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATCTCGAGCCTGCTCGATaGGCATCGACACAACAGTTT +
Preference number: 4 (lower is better)
Translates to: STEGCLPMHKVLQDPSKDLEPAR*ASTQQF
Trigger: AAACTGTTGTGTCGATGCTCATCGAGCAGGCTCGAG...ATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp CATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGCCACTATCACCTTTCTaGCACTGCGTGACACCCTTT +
Preference number: 4 (lower is better)
Translates to: HAQSPPGSQQGCKCCGQRPLSPF*HCVTPF
Trigger: AAAGGGTGTCACGCAGTGTCAGAAAGGTGATAGTGG...CCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp CTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCTCAGGAACCGTAGACTaGGGCAACTTGTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: LPMHKVLQDPSKDANAVGSGTVD*GNLSKA
Trigger: AGCCTTTGACAAGTTGCCTCAGTCTACGGTTCCTGA...GCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TCTGAGCTGATGAACTCTCCTGAGTGCTCAGCTAGCGTGGCACCAGGACCTGGCCTTTCAGCTGCAGGATaGCAGGTGCCAAATTACTAC +
Preference number: 4 (lower is better)
Translates to: SELMNSPECSASVAPGPGLSAAG*QVPNYY
Trigger: GTAGTAATTTGGCACCTGTCATCCTGCAGCTGAAAG...GCCAGGTCCTGGTGCCACGCTAGCTGAGCACTCAGGAGAGTTCATCAGCTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TGCTGGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTAGTAACTCCAAGGCTTaGACCATCGACTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: CWKWHAGLVSVLSEPTPTSNSKA*TIDCAG
Trigger: TCCAGCACAGTCGATGGTTCAAGCCTTGGAGTTACT...AGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCGACTTCCTGGGCACTTaGAACTTGACAAGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: SHSARCSTEGCLPMHKVLDFLGT*NLTRSF
Trigger: AAAGCTTCTTGTCAAGTTTCAAGTGCCCAGGAAGTC...GAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp CTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTGACTTCCTGGGCACTTaGAACTTGACAAGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: LPLCPLQHRRMPAHAQSPDFLGT*NLTRSF
Trigger: AAAGCTTCTTGTCAAGTTTCAAGTGCCCAGGAAGTC...AGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp GTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCCTGGCACTACACTCTaGGAGGACGCTAAGCCTACC +
Preference number: 4 (lower is better)
Translates to: VHPTWCFGLQWLTFLLVSPGTTL*EDAKPT
Trigger: GGTAGGCTTAGCGTCCTCTCAGAGTGTAGTGCCAGG...GGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp ACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCGCATCCAAACTGTTGTaGATTCCTGCTAAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: TPTLPAAAQKDACPCTKSASKLL*IPAKEE
Trigger: CTCCTCTTTAGCAGGAATTCACAACAGTTTGGATGC...GGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAAAATACCGGCAGCTTCTaGCTCTGCTGCTCTATGGAA +
Preference number: 4 (lower is better)
Translates to: ETLCPSDMPFGGFGRDPQNTGSF*LCCSME
Trigger: TTCCATAGAGCAGCAGAGGCAGAAGCTGCCGGTATT...TTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGTGTCCAGCCGGCTTCTaGAAGGTACTGAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: GLQWLTFLLVSHRAGPGLCPAGF*KVLRNL
Trigger: CAGATTCCTCAGTACCTTGCAGAAGCCGGCTGGACA...CAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAATTCAGCTACTCTCCCTaGAACTGTAACAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: AQSPPGSQQGCKCCGQREFSYSP*NCNSSH
Trigger: GTGGCTGCTGTTACAGTTGCAGGGAGAGTAGCTGAA...TTCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
CDS-3UTR GCA 90 bp AATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGCTGCTCGTGGCCCAGCACTaGACCCCTTTCTTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: NHQSLASLLAADKQGQGLLVAQH*TPFFSY
Trigger: GTAGCTGAAGAAAGGGGTGCAGTGCTGGGCCACGAG...CAGCCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTGCCAGCTCACCCCAAAAGGAAGGCAGTCCTaGATACATGGGGAGAACTCG +
Preference number: 4 (lower is better)
Translates to: SPLQSNQTFHRSWCQLTPKGRQS*IHGENS
Trigger: CGAGTTCTCCCCATGTATGCAGGACTGCCTTCCTTT...TGGGGTGAGCTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGCCAAATTACTACGCTaGATCTCAGGAACCGTAGAC +
Preference number: 4 (lower is better)
Translates to: LVSVLSEPTPTLPAAAQKAKLLR*ISGTVD
Trigger: GTCTACGGTTCCTGAGATGCAGCGTAGTAATTTGGC...CTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGCCTAGTGCTTTCAGCTaGAGGATGACAGGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: CSTEGCLPMHKVLQDPSKPSAFS*RMTGAK
Trigger: TTTGGCACCTGTCATCCTGCAGCTGAAAGCACTAGG...CTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GGCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAATTGAACCATCGACTGTaGTGGAGGGGGCGACATGAA +
Preference number: 4 (lower is better)
Translates to: GNKTSACWKNCPHALLQELNHRL*WRGRHE
Trigger: TTCATGTCGCCCCCTCCAGCACAGTCGATGGTTCAA...TTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
CDS-3UTR GCA 90 bp AAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCACTCTGCAATTCTCATaGCAAGCGGTTCAGTTAGGC +
Preference number: 4 (lower is better)
Translates to: KWHAGLVSVLSEPTPTLPTLQFS*QAVQLG
Trigger: GCCTAACTGAACCGCTTGGCATGAGAATTGCAGAGT...GGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGACGGTGCACTCGAATTaGGTGAGACTTCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: HAQSPPGSQQGCKCCGQRTVHSN*VRLLVW
Trigger: CCAAACCAGAAGTCTCACGCAATTCGAGTGCACCGT...CCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGCTGGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTAGAATGAAACCTCGCTaGATTGGCGAAGAAGCCGGA +
Preference number: 4 (lower is better)
Translates to: CWKWHAGLVSVLSEPTPTRMKPR*IGEEAG
Trigger: TCCGGCTTCTTCGCCAATGCAGCGAGGTTTCATTCT...AGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGCAGCAAGGATGCAAATaGTGTGGGCAGCGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: DACPCTKSSRIPARMQMLQQGCK*CGQREE
Trigger: TTCTTCCCGCTGCCCACAGCATTTGCATCCTTGCTG...CAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTCAGCAAGGATGCAAATaGTGTGGGCAGCGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: GCLPMHKVLQDPSKDANAQQGCK*CGQREE
Trigger: TTCTTCCCGCTGCCCACAGCATTTGCATCCTTGCTG...AGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCAGCAAGGATGCAAATaGTGTGGGCAGCGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: ATKPVPAGRTVPTRSCKNQQGCK*CGQREE
Trigger: TTCTTCCCGCTGCCCACAGCATTTGCATCCTTGCTG...GTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGAAGGATGCCTGCCCATaGACAAAGTCCTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: DACPCTKSSRIPARMQMLKDACP*TKSSRI
Trigger: GATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTT...CAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GCGAAGAAGCCGGAGACAATGCACCTCAGAACCAGATCCGGGTCACCTTCACTAAAGGATGCCTGCCCATaGACAAAGTCCTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: AKKPETMHLRTRSGSPSLKDACP*TKSSRI
Trigger: GATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTT...TAGTGAAGGTGACCCGGATCTGGTTCTGAGGTGCATTGTCTCCGGCTTCTTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCTGCAGCACAGAAGGATaGCTGCCCATGCACAAAGTC +
Preference number: 4 (lower is better)
Translates to: QQNQCLLEELSPRALARTCSTEG*LPMHKV
Trigger: GACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCA...GGTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGCTGTGGCCCCAGCAGGTTTGGGAGACCCTGTaGCCATCAGACATGCCCTTT +
Preference number: 4 (lower is better)
Translates to: LFTPGSRPHWLTQLWPQQVWETL*PSDMPF
Trigger: AAAGGGCATGTCTGATGGGCACAGGGTCTCCCAAAC...CTGCTGGGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATATGAACTCTCCTGAGTaGTCAGCTAGCGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: STEGCLPMHKVLQDPSKDMNSPE*SASVAP
Trigger: TGGTGCCACGCTAGCTGAGCACTCAGGAGAGTTCAT...ATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACATGAACTCTCCTGAGTaGTCAGCTAGCGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: ATKPVPAGRTVPTRSCKNMNSPE*SASVAP
Trigger: TGGTGCCACGCTAGCTGAGCACTCAGGAGAGTTCAT...GTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp ACCATCGACTGTGCTGGAGGGGGCGACATGAAGTGGAACCTGAGGACATTGTCAGTCCCCACGCGCTCTTaGAAGAACCCAAGCAAACAA +
Preference number: 4 (lower is better)
Translates to: TIDCAGGGDMKWNLRTLSVPTRS*KNPSKQ
Trigger: TTGTTTGCTTGGGTTCTTGCAAGAGCGCGTGGGGAC...TGACAATGTCCTCAGGTTCCACTTCATGTCGCCCCCTCCAGCACAGTCGATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484417.5
CDS-3UTR GCA 90 bp GCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAAAACAAAACCAGTGCCTaGTGGAAGAACTGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: AQSPPGSQQGCKCCGQRENKTSA*WKNCPH
Trigger: GTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTT...TTCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGGGCAACAAAACCAGTaGCTGCTGGAAGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: STEGCLPMHKVLQDPSKDGQQNQ*LLEELS
Trigger: GGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGCCC...ATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGTCCAGCCGGCTTCTaGAAGGTACTTGAATACCGG +
Preference number: 4 (lower is better)
Translates to: DACPCTKSSRIPARMQMLCPAGF*KVLEYR
Trigger: CCGGTATTCAAGTACCTTGCAGAAGCCGGCTGGACA...CAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373323.8
CDS-3UTR CCA 90 bp AAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCCAAGGCCTCTGCTGCTCTATaGAAAGGGCAGCATAAGGGT +
Preference number: 4 (lower is better)
Translates to: KTSACWKNCPHALLQEPKASAAL*KGQHKG
Trigger: ACCCTTATGCTGCCCTTTCCATAGAGCAGCAGAGGC...CTTGGGTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCCTCTGCTGCTCTATaGAAAGGGCAGCATAAGGGT +
Preference number: 4 (lower is better)
Translates to: STEGCLPMHKVLQDPSKDASAAL*KGQHKG
Trigger: ACCCTTATGCTGCCCTTTCCATAGAGCAGCAGAGGC...ATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGGCCACTCTTCGAGGCTaGGTCACTCCTACCACTCTT +
Preference number: 4 (lower is better)
Translates to: CAHQTCPLVVSAEIPNVSATLRG*VTPTTL
Trigger: AAGAGTGGTAGGAGTGACCCAGCCTCGAAGAGTGGC...CGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GGCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAAATTCTCGTGGCCAGCTaGTCGGTGCAGTCATCAAAG +
Preference number: 4 (lower is better)
Translates to: GNKTSACWKNCPHALLQEILVAS*SVQSSK
Trigger: CTTTGATGACTGCACCGACCAGCTGGCCACGAGAAT...TTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTGCCAGCTCACCCCATACAAGGTCCTCTCGTaGGCTTCATCCAGCATGATG +
Preference number: 4 (lower is better)
Translates to: SPLQSNQTFHRSWCQLTPYKVLS*ASSSMM
Trigger: CATCATGCTGGATGAAGCCCACGAGAGGACCTTGTA...TGGGGTGAGCTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCTCTGGATCTGCATCATaGCAGCGATGCTTAGAATTT +
Preference number: 4 (lower is better)
Translates to: PTLPAAAQKDACPCTKSSSGSAS*QRCLEF
Trigger: AAATTCTAAGCATCGCTGCCATGATGCAGATCCAGA...GGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGCATGCCGAAACCTCGCTGCATTaGCGAAGAAGCCGGAGACAA +
Preference number: 4 (lower is better)
Translates to: QWLTFLLVSHRAGPGLHAETSLH*RRSRRQ
Trigger: TTGTCTCCGGCTTCTTCGCCAATGCAGCGAGGTTTC...GGCATGCAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGAAACCTCGCTGCATTaGCGAAGAAGCCGGAGACAA +
Preference number: 4 (lower is better)
Translates to: STEGCLPMHKVLQDPSKDETSLH*RRSRRQ
Trigger: TTGTCTCCGGCTTCTTCGCCAATGCAGCGAGGTTTC...ATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp ACCATCGACTGTGCTGGAGGGGGCGACATGAAGTGGAACCTGAGGACATTGTCAGAAACCTCGCTGCATTaGCGAAGAAGCCGGAGACAA +
Preference number: 4 (lower is better)
Translates to: TIDCAGGGDMKWNLRTLSETSLH*RRSRRQ
Trigger: TTGTCTCCGGCTTCTTCGCCAATGCAGCGAGGTTTC...TGACAATGTCCTCAGGTTCCACTTCATGTCGCCCCCTCCAGCACAGTCGATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484417.5
CDS-3UTR CCA 90 bp AACCTCGCTGCATTGGCGAAGAAGCCGGAGACAATGCACCTCAGAACCAGATCCGAAACCTCGCTGCATTaGCGAAGAAGCCGGAGACAA +
Preference number: 4 (lower is better)
Translates to: NLAALAKKPETMHLRTRSETSLH*RRSRRQ
Trigger: TTGTCTCCGGCTTCTTCGCCAATGCAGCGAGGTTTC...GGATCTGGTTCTGAGGTGCATTGTCTCCGGCTTCTTCGCCAATGCAGCGAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCGCCAGGCCGATTCAATaGCAGTCACATCTCTCATGT +
Preference number: 4 (lower is better)
Translates to: HRRMPAHAQSPPGSQQGCARPIQ*QSHLSC
Trigger: ACATGAGAGATGTGACTGCCATTGAATCGGCCTGGC...GCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp ATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTACGGGTCCTGGACCTTaGCCCTTTTGGCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: MPAHAQSPPGSQQGCKCCTGPGP*PFWLSE
Trigger: CTCTGAAAGCCAAAAGGGCCAAGGTCCAGGACCCGT...ACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCTCTGTCCACCCCACATaGTGTTTTGGCCTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: QQNQCLLEELSPRALARTSVHPT*CFGLQW
Trigger: CCACTGAAGGCCAAAACACCATGTGGGGTGGACAGA...GGTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp ATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGCAGCAGACCTCATTaGTTAACACAGCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: MPAHAQSPPGSQQGCKCCGSRPH*LTQLWP
Trigger: GGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCC...ACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAAACAGACAGAAGCCACTaGGTTTGGGAGACCCTGTGC +
Preference number: 4 (lower is better)
Translates to: RRMPAHAQSPPGSQQGCKTDRSH*VWETLC
Trigger: GCACAGGGTCTCCCAAACCCAGTGGCTTCTGTCTGT...TTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCACGTGGCACCAGGACCTaGCACTACACTCTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: PPHMVFWPSVANFPPCFPRGTRT*HYTLRG
Trigger: TCCTCTCAGAGTGTAGTGCCAGGTCCTGGTGCCACG...TGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGACAGCAAAGCAGCCCTaGGGCAACAAAACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: CAHQTCPLVVSAEIPNVSTAKQP*GNKTSA
Trigger: GGCACTGGTTTTGTTGCCCCAGGGCTGCTTTGCTGT...CGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TGCTGGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTTGCATCCAGAGTGGCTaGAGCTACAATCAATCGAAG +
Preference number: 4 (lower is better)
Translates to: CWKWHAGLVSVLSEPTPTCIQSG*SYNQSK
Trigger: CTTCGATTGATTGTAGCTTCAGCCACTCTGGATGCA...AGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp ATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTCTCGAGCCTGCTCGATaGGCATCGACACAACAGTTT +
Preference number: 4 (lower is better)
Translates to: MPAHAQSPPGSQQGCKCCLEPAR*ASTQQF
Trigger: AAACTGTTGTGTCGATGCTCATCGAGCAGGCTCGAG...ACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp AGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAACTCGAGCCTGCTCGATaGGCATCGACACAACAGTTT +
Preference number: 4 (lower is better)
Translates to: RRMPAHAQSPPGSQQGCKLEPAR*ASTQQF
Trigger: AAACTGTTGTGTCGATGCTCATCGAGCAGGCTCGAG...TTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp AAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCCTTTCTGACACTGCGTaGCACCCTTTCAAACACTTT +
Preference number: 4 (lower is better)
Translates to: KWHAGLVSVLSEPTPTLPLSDTA*HPFKHF
Trigger: AAAGTGTTTGAAAGGGTGTCACGCAGTGTCAGAAAG...GGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp GGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTCCACTATCACCTTTCTaGCACTGCGTGACACCCTTT +
Preference number: 4 (lower is better)
Translates to: GCLPMHKVLQDPSKDANAPLSPF*HCVTPF
Trigger: AAAGGGTGTCACGCAGTGTCAGAAAGGTGATAGTGG...AGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp CTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCCTTTCAGCTGCAGGATaGCAGGTGCCAAATTACTAC +
Preference number: 4 (lower is better)
Translates to: LPMHKVLQDPSKDANAVGLSAAG*QVPNYY
Trigger: GTAGTAATTTGGCACCTGTCATCCTGCAGCTGAAAG...GCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp GATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGAGTAACTCCAAGGCTTaGACCATCGACTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: DACPCTKSSRIPARMQMLSNSKA*TIDCAG
Trigger: TCCAGCACAGTCGATGGTTCAAGCCTTGGAGTTACT...CAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp GGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGAGTAACTCCAAGGCTTaGACCATCGACTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GLQWLTFLLVSHRAGPGLSNSKA*TIDCAG
Trigger: TCCAGCACAGTCGATGGTTCAAGCCTTGGAGTTACT...CAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp ACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCATGCTTAGAATTTCCTaGGAACAGCCGAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: TPTLPAAAQKDACPCTKSMLRIS*EQPKFP
Trigger: AGGAAACTTCGGCTGTTCTCAGGAAATTCTAAGCAT...GGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TGGGAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCGCATCCAAACTGTTGTaGATTCCTGCTAAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: WETLCPSDMPFGGFGRDPASKLL*IPAKEE
Trigger: CTCCTCTTTAGCAGGAATTCACAACAGTTTGGATGC...GGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TCCAGTAGAATGAAACCTCGCTGCATTGGCGAAGAAGCCGGAGACAATGCACCTGGCAGCTTCTGCCTCTaGTGCTCTATGGAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SSRMKPRCIGEEAGDNAPGSFCL*CSMERA
Trigger: TGCCCTTTCCATAGAGCAGCAGAGGCAGAAGCTGCC...AGGTGCATTGTCTCCGGCTTCTTCGCCAATGCAGCGAGGTTTCATTCTACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATAATACCGGCAGCTTCTaGCTCTGCTGCTCTATGGAA +
Preference number: 4 (lower is better)
Translates to: STEGCLPMHKVLQDPSKDNTGSF*LCCSME
Trigger: TTCCATAGAGCAGCAGAGGCAGAAGCTGCCGGTATT...ATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTTCAGCTACTCTCCCTaGAACTGTAACAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: DACPCTKSSRIPARMQMLFSYSP*NCNSSH
Trigger: GTGGCTGCTGTTACAGTTGCAGGGAGAGTAGCTGAA...CAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
CDS-3UTR GCA 90 bp CCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCACACACATGTATCCCTTaGTGGATCACTGGTTTCATT +
Preference number: 4 (lower is better)
Translates to: PLCPLQHRRMPAHAQSPPHTCIP*WITGFI
Trigger: AATGAAACCAGTGATCCAGCAAGGGATACATGTGTG...TGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCGCTAGTGCTCGAGCCTaGTCGATGAGCATCGACACA +
Preference number: 4 (lower is better)
Translates to: VHPTWCFGLQWLTFLLVSASARA*SMSIDT
Trigger: TGTGTCGATGCTCATCGAGCAGGCTCGAGCACTAGC...GGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GGCTTCCTCTGTATAAAGGCGATAACATTTTCCCGAGCGACTACGACCACCACGGCTAGTGCTCGAGCCTaGTCGATGAGCATCGACACA +
Preference number: 4 (lower is better)
Translates to: GFLCIKAITFSRATTTTTASARA*SMSIDT
Trigger: TGTGTCGATGCTCATCGAGCAGGCTCGAGCACTAGC...CGTGGTGGTCGTAGTCGCTCGGGAAAATGTTATCGCCTTTATACAGAGGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGTGTGATAGAGGTTTCTaGCACATTGGTGGCCACTAT +
Preference number: 4 (lower is better)
Translates to: LVSVLSEPTPTLPAAAQKCDRGF*HIGGHY
Trigger: ATAGTGGCCACCAATGTGGCAGAAACCTCTATCACA...CTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGCTGCAGGATGACAGGTaGCAAATTACTACGCTGCAT +
Preference number: 4 (lower is better)
Translates to: HAQSPPGSQQGCKCCGQRLQDDR*QITTLH
Trigger: ATGCAGCGTAGTAATTTGGCACCTGTCATCCTGCAG...CCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGACTGCAGGATGACAGGTaGCAAATTACTACGCTGCAT +
Preference number: 4 (lower is better)
Translates to: CTKSSRIPARMQMLWAAGLQDDR*QITTLH
Trigger: ATGCAGCGTAGTAATTTGGCACCTGTCATCCTGCAG...TCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGCCTAGTGCTTTCAGCTaGAGGATGACAGGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: DACPCTKSSRIPARMQMLPSAFS*RMTGAK
Trigger: TTTGGCACCTGTCATCCTGCAGCTGAAAGCACTAGG...CAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GCGAAGAAGCCGGAGACAATGCACCTCAGAACCAGATCCGGGTCACCTTCACTACCTAGTGCTTTCAGCTaGAGGATGACAGGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: AKKPETMHLRTRSGSPSLPSAFS*RMTGAK
Trigger: TTTGGCACCTGTCATCCTGCAGCTGAAAGCACTAGG...TAGTGAAGGTGACCCGGATCTGGTTCTGAGGTGCATTGTCTCCGGCTTCTTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAACTCTGCAATTCTCATaGCAAGCGGTTCAGTTAGGC +
Preference number: 4 (lower is better)
Translates to: CTKSSRIPARMQMLWAAGTLQFS*QAVQLG
Trigger: GCCTAACTGAACCGCTTGGCATGAGAATTGCAGAGT...TCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAAAGATATTCTGGATCTaGATCATGGCAGCGATGCTT +
Preference number: 4 (lower is better)
Translates to: PLCPLQHRRMPAHAQSPPKIFWI*IMAAML
Trigger: AAGCATCGCTGCCATGATGCAGATCCAGAATATCTT...TGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCACGGTGCACTCGAATTaGGTGAGACTTCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: QQNQCLLEELSPRALARTTVHSN*VRLLVW
Trigger: CCAAACCAGAAGTCTCACGCAATTCGAGTGCACCGT...GGTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTACGGTGCACTCGAATTaGGTGAGACTTCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: GCLPMHKVLQDPSKDANATVHSN*VRLLVW
Trigger: CCAAACCAGAAGTCTCACGCAATTCGAGTGCACCGT...AGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAAAGAAGCCGGAGACAATaGACCTCAGAACCAGATCCG +
Preference number: 4 (lower is better)
Translates to: RRMPAHAQSPPGSQQGCKRSRRQ*TSEPDP
Trigger: CGGATCTGGTTCTGAGGTGCATTGTCTCCGGCTTCT...TTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CTGCATCTGGCATGTGTTGAAATGCAATCATCATCACAGCAAAGCAGCCCTGGGGGATCCCAGCAAGGATaGAAATGCTGTGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LHLACVEMQSSSQQSSPGGSQQG*KCCGQR
Trigger: CCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCC...CCCAGGGCTGCTTTGCTGTGATGATGATTGCATTTCAACACATGCCAGATGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCTCATTCGTAGAGACATaGTTGTTCACACCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: HRRMPAHAQSPPGSQQGCSFVET*LFTPGS
Trigger: GCTGCCAGGTGTGAACAAGCATGTCTCTACGAATGA...GCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCTCATTCGTAGAGACATaGTTGTTCACACCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LPMHKVLQDPSKDANAVGSFVET*LFTPGS
Trigger: GCTGCCAGGTGTGAACAAGCATGTCTCTACGAATGA...GCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGCTGTGGCCCCAGCAGCAATCACCAATCCCTTaGAAGTCTCCTGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LFTPGSRPHWLTQLWPQQQSPIP*KSPGCR
Trigger: TCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTG...CTGCTGGGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp ATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGTCCCCACGCGCTCTTaGAAGAACCCAAGCAAACAA +
Preference number: 4 (lower is better)
Translates to: MPAHAQSPPGSQQGCKCCVPTRS*KNPSKQ
Trigger: TTGTTTGCTTGGGTTCTTGCAAGAGCGCGTGGGGAC...ACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCCAAGAACAAAACCAGTGCCTaGTGGAAGAACTGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: KTSACWKNCPHALLQEPKNKTSA*WKNCPH
Trigger: GTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTT...CTTGGGTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGAGACATGCCGGGCGCAGCCATGTTaGGGTAAAAGGTCACGAGGC +
Preference number: 4 (lower is better)
Translates to: LWWFRQRSPMFRSFVETCRAQPC*GKRSRG
Trigger: GCCTCGTGACCTTTTACCCCAACATGGCTGCGCCCG...GCATGTCTCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252011.8
ENST00000373325.6
CDS-3UTR CCA 90 bp GTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCGCCACTCTTCGAGGCTaGGTCACTCCTACCACTCTT +
Preference number: 4 (lower is better)
Translates to: VHPTWCFGLQWLTFLLVSATLRG*VTPTTL
Trigger: AAGAGTGGTAGGAGTGACCCAGCCTCGAAGAGTGGC...GGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCTTTTTAGCAAGCCAATaGCAATGTCAGTGTACAAGG +
Preference number: 4 (lower is better)
Translates to: SEPTPTLPAAAQKDACPCFLASQ*QCQCTR
Trigger: CCTTGTACACTGACATTGCCATTGGCTTGCTAAAAA...GCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCTGTCTGCATCCAGAGTaGCTGAAGCTACAATCAATC +
Preference number: 4 (lower is better)
Translates to: KWHAGLVSVLSEPTPTLPCLHPE*LKLQSI
Trigger: GATTGATTGTAGCTTCAGCCACTCTGGATGCAGACA...GGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCAGCAGTCCTGCATACATaGGGAGAACTCGGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: PPHMVFWPSVANFPPCFPAVLHT*GELGGV
Trigger: GACACCTCCGAGTTCTCCCCATGTATGCAGGACTGC...TGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGCTGGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTAGGTTTCTGCCACATTaGTGGCCACTATCACCTTTC +
Preference number: 4 (lower is better)
Translates to: CWKWHAGLVSVLSEPTPTRFLPH*WPLSPF
Trigger: GAAAGGTGATAGTGGCCACCAATGTGGCAGAAACCT...AGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GGACTGACGCAGGGTGTATGTGCAGCTCATGGTCATCACGGATGGTCCTATAAGGGGGGCGACATGAAGTaGAACCTGAGGACATTGTCA +
Preference number: 4 (lower is better)
Translates to: GLTQGVCAAHGHHGWSYKGGDMK*NLRTLS
Trigger: TGACAATGTCCTCAGGTTCCACTTCATGTCGCCCCC...CTTATAGGACCATCCGTGATGACCATGAGCTGCACATACACCCTGCGTCAGTCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000484417.5
CDS-3UTR CCA 90 bp TGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGATGTATGTGCAGCTCATaGTCATCACGGATGGTCCTA +
Preference number: 4 (lower is better)
Translates to: CTKSSRIPARMQMLWAAGCMCSS*SSRMVL
Trigger: TAGGACCATCCGTGATGACCATGAGCTGCACATACA...TCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACGCCAGGCCGATTCAATaGCAGTCACATCTCTCATGT +
Preference number: 4 (lower is better)
Translates to: ATKPVPAGRTVPTRSCKNARPIQ*QSHLSC
Trigger: ACATGAGAGATGTGACTGCCATTGAATCGGCCTGGC...GTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCACGGGTCCTGGACCTTaGCCCTTTTGGCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: VHPTWCFGLQWLTFLLVSTGPGP*PFWLSE
Trigger: CTCTGAAAGCCAAAAGGGCCAAGGTCCAGGACCCGT...GGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCAACGGGTCCTGGACCTTaGCCCTTTTGGCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: PPHMVFWPSVANFPPCFPTGPGP*PFWLSE
Trigger: CTCTGAAAGCCAAAAGGGCCAAGGTCCAGGACCCGT...TGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CTGCATCTGGCATGTGTTGAAATGCAATCATCATCACAGCAAAGCAGCCCTGGGACATTCCACAGGAGCTaGTGCCAGCTCACCCCACCT +
Preference number: 4 (lower is better)
Translates to: LHLACVEMQSSSQQSSPGTFHRS*CQLTPP
Trigger: AGGTGGGGTGAGCTGGCACCAGCTCCTGTGGAATGT...CCCAGGGCTGCTTTGCTGTGATGATGATTGCATTTCAACACATGCCAGATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCACAGACAGAAGCCACTaGGTTTGGGAGACCCTGTGC +
Preference number: 4 (lower is better)
Translates to: VHPTWCFGLQWLTFLLVSTDRSH*VWETLC
Trigger: GCACAGGGTCTCCCAAACCCAGTGGCTTCTGTCTGT...GGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCAACAGACAGAAGCCACTaGGTTTGGGAGACCCTGTGC +
Preference number: 4 (lower is better)
Translates to: PPHMVFWPSVANFPPCFPTDRSH*VWETLC
Trigger: GCACAGGGTCTCCCAAACCCAGTGGCTTCTGTCTGT...TGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTAATGACATACACGTTTaGTGCCAAAAGTGGCACATC +
Preference number: 4 (lower is better)
Translates to: LPLCPLQHRRMPAHAQSPNDIHV*CQKWHI
Trigger: GATGTGCCACTTTTGGCACCAAACGTGTATGTCATT...AGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGAGACAACCATCGACTGTGCTaGAGGGGGCTTGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CPLVVSAEIPNVSFIRRDNHRLC*RGLVWL
Trigger: CAGCCAGACAAGCCCCCTCCAGCACAGTCGATGGTT...GTCTCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652169.1
3UTR CAA 72 bp ACAGCGCACGAGTCCTCTCTGTCAATCACCAATCCCTaGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: TAHESSLSITNP*QVSWLQINRDK
Trigger: CTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGACAGAGAGGACTCGTGCGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR CAA 72 bp GCTGGAGGGGGCGACATGAAGTGGAACCTGAGGACATaGTCAATTCCTAGTGCTTTCAGCTGCAGGATGACA +
Preference number: 4 (lower is better)
Translates to: AGGGDMKWNLRT*SIPSAFSCRMT
Trigger: TGTCATCCTGCAGCTGAAAGCACTAGGAATTGACAATGTCCTCAGGTTCCACTTCATGTCGCCCCCTCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484417.5
CDS-3UTR TCA 90 bp CACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCCTTTCTGACACTGCGTaGCACCCTTTCAAACACTTT +
Preference number: 4 (lower is better)
Translates to: HRRMPAHAQSPPGSQQGCLSDTA*HPFKHF
Trigger: AAAGTGTTTGAAAGGGTGTCACGCAGTGTCAGAAAG...GCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp ACACCTGGCAGCAGACCTCATTGGTTAACACAGCTGTGGCCCCAGCAGGGAAAGCTTTCTGACACTGCGTaGCACCCTTTCAAACACTTT +
Preference number: 4 (lower is better)
Translates to: TPGSRPHWLTQLWPQQGKLSDTA*HPFKHF
Trigger: AAAGTGTTTGAAAGGGTGTCACGCAGTGTCAGAAAG...CTTTCCCTGCTGGGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp CAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGCATGCCCTTTCAGCTGCAGGATaGCAGGTGCCAAATTACTAC +
Preference number: 4 (lower is better)
Translates to: QWLTFLLVSHRAGPGLHALSAAG*QVPNYY
Trigger: GTAGTAATTTGGCACCTGTCATCCTGCAGCTGAAAG...GGCATGCAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGATGCTTAGAATTTCCTaGGAACAGCCGAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LVSVLSEPTPTLPAAAQKMLRIS*EQPKFP
Trigger: AGGAAACTTCGGCTGTTCTCAGGAAATTCTAAGCAT...CTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGACTTCCTGGGCACTTaGAACTTGACAAGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: CSTEGCLPMHKVLQDPSKDFLGT*NLTRSF
Trigger: AAAGCTTCTTGTCAAGTTTCAAGTGCCCAGGAAGTC...CTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGCCTGGCACTACACTCTaGGAGGACGCTAAGCCTACC +
Preference number: 4 (lower is better)
Translates to: FVETCLFTPGSRPHWLTQPGTTL*EDAKPT
Trigger: GGTAGGCTTAGCGTCCTCTCAGAGTGTAGTGCCAGG...CTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGCATCTGGCATGTGTTaGAATGCAATCATCATCACA +
Preference number: 4 (lower is better)
Translates to: LVSVLSEPTPTLPAAAQKASGMC*NAIIIT
Trigger: TGTGATGATGATTGCATTTCAACACATGCCAGATGC...CTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCAGTCTCTCTTCAGAGATaGTTACACCTGGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: PPHMVFWPSVANFPPCFPVSLQR*LHLAPL
Trigger: CAGAGGGGCCAGGTGTAAGCATCTCTGAAGAGAGAC...TGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TCAATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGCGTCTCTCTTCAGAGATaGTTACACCTGGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SITNPLQVSWLQINRDKGVSLQR*LHLAPL
Trigger: CAGAGGGGCCAGGTGTAAGCATCTCTGAAGAGAGAC...GCCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGAGACGGCAGCTTCTGCCTCTaGTGCTCTATGGAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: CPLVVSAEIPNVSFIRRDGSFCL*CSMERA
Trigger: TGCCCTTTCCATAGAGCAGCAGAGGCAGAAGCTGCC...GTCTCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GCACTACACTCTGAGAGGACGCTAAGCCTACCTGTGAAACACAAATCCTCTGCTGGCAGCTTCTGCCTCTaGTGCTCTATGGAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: ALHSERTLSLPVKHKSSAGSFCL*CSMERA
Trigger: TGCCCTTTCCATAGAGCAGCAGAGGCAGAAGCTGCC...AGCAGAGGATTTGTGTTTCACAGGTAGGCTTAGCGTCCTCTCAGAGTGTAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AAAAGTGTGGAGCCAGCTCCAACAGCCAGGCCGATTCAATGGCAGTCACATCTCAATACCGGCAGCTTCTaGCTCTGCTGCTCTATGGAA +
Preference number: 4 (lower is better)
Translates to: KSVEPAPTARPIQWQSHLNTGSF*LCCSME
Trigger: TTCCATAGAGCAGCAGAGGCAGAAGCTGCCGGTATT...GAGATGTGACTGCCATTGAATCGGCCTGGCTGTTGGAGCTGGCTCCACACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCAGCTACTCTCCCTaGAACTGTAACAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: CAHQTCPLVVSAEIPNVSFSYSP*NCNSSH
Trigger: GTGGCTGCTGTTACAGTTGCAGGGAGAGTAGCTGAA...CGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252011.8
ENST00000373325.6
CDS-3UTR GCA 90 bp TTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGCTCGTGGCCCAGCACTaGACCCCTTTCTTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: FVETCLFTPGSRPHWLTQLVAQH*TPFFSY
Trigger: GTAGCTGAAGAAAGGGGTGCAGTGCTGGGCCACGAG...CTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp ATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTAAAGGAAGGCAGTCCTaGATACATGGGGAGAACTCG +
Preference number: 4 (lower is better)
Translates to: MPAHAQSPPGSQQGCKCCKGRQS*IHGENS
Trigger: CGAGTTCTCCCCATGTATGCAGGACTGCCTTCCTTT...ACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCTCAAACACTTTCATTTaGTCAAAGGAAGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SHSARCSTEGCLPMHKVLSNTFI*SKEGSP
Trigger: AGGACTGCCTTCCTTTGAGCAAATGAAAGTGTTTGA...GAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAATGTGATAGAGGTTTCTaGCACATTGGTGGCCACTAT +
Preference number: 4 (lower is better)
Translates to: AQSPPGSQQGCKCCGQRECDRGF*HIGGHY
Trigger: ATAGTGGCCACCAATGTGGCAGAAACCTCTATCACA...TTCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGCCAAATTACTACGCTaGATCTCAGGAACCGTAGAC +
Preference number: 4 (lower is better)
Translates to: GCLPMHKVLQDPSKDANAAKLLR*ISGTVD
Trigger: GTCTACGGTTCCTGAGATGCAGCGTAGTAATTTGGC...AGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGCATGCCGCCAAATTACTACGCTaGATCTCAGGAACCGTAGAC +
Preference number: 4 (lower is better)
Translates to: QWLTFLLVSHRAGPGLHAAKLLR*ISGTVD
Trigger: GTCTACGGTTCCTGAGATGCAGCGTAGTAATTTGGC...GGCATGCAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCCAAGCTGCAGGATGACAGGTaGCAAATTACTACGCTGCAT +
Preference number: 4 (lower is better)
Translates to: KTSACWKNCPHALLQEPKLQDDR*QITTLH
Trigger: ATGCAGCGTAGTAATTTGGCACCTGTCATCCTGCAG...CTTGGGTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGCTGCAGGATGACAGGTaGCAAATTACTACGCTGCAT +
Preference number: 4 (lower is better)
Translates to: GLQWLTFLLVSHRAGPGLLQDDR*QITTLH
Trigger: ATGCAGCGTAGTAATTTGGCACCTGTCATCCTGCAG...CAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCTGCAGGATGACAGGTaGCAAATTACTACGCTGCAT +
Preference number: 4 (lower is better)
Translates to: ATKPVPAGRTVPTRSCKNLQDDR*QITTLH
Trigger: ATGCAGCGTAGTAATTTGGCACCTGTCATCCTGCAG...GTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GGCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAAACTCTGCAATTCTCATaGCAAGCGGTTCAGTTAGGC +
Preference number: 4 (lower is better)
Translates to: GNKTSACWKNCPHALLQETLQFS*QAVQLG
Trigger: GCCTAACTGAACCGCTTGGCATGAGAATTGCAGAGT...TTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGAGACGACGCAGGGTGTATGTaGAGCTCATGGTCATCACGG +
Preference number: 4 (lower is better)
Translates to: CPLVVSAEIPNVSFIRRDDAGCM*SSWSSR
Trigger: CCGTGATGACCATGAGCTGCACATACACCCTGCGTC...GTCTCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252011.8
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TCTGTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTGCACAGAAGGATGCCTaGCCATGCACAAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SVHPTWCFGLQWLTFLLVAQKDA*PCTKSS
Trigger: GGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGC...AACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TCAATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGCTGCAGCACAGAAGGATaGCTGCCCATGCACAAAGTC +
Preference number: 4 (lower is better)
Translates to: SITNPLQVSWLQINRDKGCSTEG*LPMHKV
Trigger: GACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCA...GCCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GGCTTCCTCTGTATAAAGGCGATAACATTTTCCCGAGCGACTACGACCACCACGTGCAGCACAGAAGGATaGCTGCCCATGCACAAAGTC +
Preference number: 4 (lower is better)
Translates to: GFLCIKAITFSRATTTTTCSTEG*LPMHKV
Trigger: GACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCA...CGTGGTGGTCGTAGTCGCTCGGGAAAATGTTATCGCCTTTATACAGAGGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GCACTACACTCTGAGAGGACGCTAAGCCTACCTGTGAAACACAAATCCTCTGCTCTGCTGGAAGTGGCATaGTGGGTTAGTGAGCGTGCT +
Preference number: 4 (lower is better)
Translates to: ALHSERTLSLPVKHKSSALLEVA*WVSERA
Trigger: AGCACGCTCACTAACCCAGCATGCCACTTCCAGCAG...AGCAGAGGATTTGTGTTTCACAGGTAGGCTTAGCGTCCTCTCAGAGTGTAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGCTAAAGAGGAGGGAGCTGGGCCAGGACTaGATGCCTGCTGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: SYRSLGHPNCCEFLLKRRELGQD*MPAGSG
Trigger: GCCACTTCCAGCAGGCATGCAGTCCTGGCCCAGCTC...CCTCCTCTTTAGCAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACTCATTCGTAGAGACATaGTTGTTCACACCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ATKPVPAGRTVPTRSCKNSFVET*LFTPGS
Trigger: GCTGCCAGGTGTGAACAAGCATGTCTCTACGAATGA...GTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp ATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTCAATCACCAATCCCTTaGAAGTCTCCTGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: MPAHAQSPPGSQQGCKCCQSPIP*KSPGCR
Trigger: TCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTG...ACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCGACATACACGTTTGGTaGCAAAAGTGGCACATCCAA +
Preference number: 4 (lower is better)
Translates to: HRRMPAHAQSPPGSQQGCDIHVW*QKWHIQ
Trigger: TTGGATGTGCCACTTTTGGCACCAAACGTGTATGTC...GCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAATTCAGCTACTCTCCCTaGAACCTTTGGGAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: AQSPPGSQQGCKCCGQREFSYSP*NLWEER
Trigger: TCTTTCTTCCCAAAGGTTGCAGGGAGAGTAGCTGAA...TTCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGATTCAGCTACTCTCCCTaGAACCTTTGGGAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: CTKSSRIPARMQMLWAAGFSYSP*NLWEER
Trigger: TCTTTCTTCCCAAAGGTTGCAGGGAGAGTAGCTGAA...TCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp ATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTTACAAGGTCCTCTCGTaGGCTTCATCCAGCATGATG +
Preference number: 4 (lower is better)
Translates to: MPAHAQSPPGSQQGCKCCYKVLS*ASSSMM
Trigger: CATCATGCTGGATGAAGCCCACGAGAGGACCTTGTA...ACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGTGTCTGCATCCAGAGTaGCTGAAGCTACAATCAATC +
Preference number: 4 (lower is better)
Translates to: CSTEGCLPMHKVLQDPSKCLHPE*LKLQSI
Trigger: GATTGATTGTAGCTTCAGCCACTCTGGATGCAGACA...CTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGTGTCTGCATCCAGAGTaGCTGAAGCTACAATCAATC +
Preference number: 4 (lower is better)
Translates to: HAQSPPGSQQGCKCCGQRCLHPE*LKLQSI
Trigger: GATTGATTGTAGCTTCAGCCACTCTGGATGCAGACA...CCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGCATGCCAGGTTTCTGCCACATTaGTGGCCACTATCACCTTTC +
Preference number: 4 (lower is better)
Translates to: QWLTFLLVSHRAGPGLHARFLPH*WPLSPF
Trigger: GAAAGGTGATAGTGGCCACCAATGTGGCAGAAACCT...GGCATGCAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGAGGTTTCTGCCACATTaGTGGCCACTATCACCTTTC +
Preference number: 4 (lower is better)
Translates to: DACPCTKSSRIPARMQMLRFLPH*WPLSPF
Trigger: GAAAGGTGATAGTGGCCACCAATGTGGCAGAAACCT...CAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GCGAAGAAGCCGGAGACAATGCACCTCAGAACCAGATCCGGGTCACCTTCACTAAGGTTTCTGCCACATTaGTGGCCACTATCACCTTTC +
Preference number: 4 (lower is better)
Translates to: AKKPETMHLRTRSGSPSLRFLPH*WPLSPF
Trigger: GAAAGGTGATAGTGGCCACCAATGTGGCAGAAACCT...TAGTGAAGGTGACCCGGATCTGGTTCTGAGGTGCATTGTCTCCGGCTTCTTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp ACACCTGGCAGCAGACCTCATTGGTTAACACAGCTGTGGCCCCAGCAGGGAAAGGTGAGACTTCTGGTTTaGGGGGACCACAAAGATATT +
Preference number: 4 (lower is better)
Translates to: TPGSRPHWLTQLWPQQGKVRLLV*GDHKDI
Trigger: AATATCTTTGTGGTCCCCCCAAACCAGAAGTCTCAC...CTTTCCCTGCTGGGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGCTGGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTGTGAGACTTCTGGTTTaGGGGGACCACAAAGATATT +
Preference number: 4 (lower is better)
Translates to: CWKWHAGLVSVLSEPTPTVRLLV*GDHKDI
Trigger: AATATCTTTGTGGTCCCCCCAAACCAGAAGTCTCAC...AGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGTGTATGTGCAGCTCATaGTCATCACGGATGGTCCTA +
Preference number: 4 (lower is better)
Translates to: GLQWLTFLLVSHRAGPGLCMCSS*SSRMVL
Trigger: TAGGACCATCCGTGATGACCATGAGCTGCACATACA...CAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252011.8
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGTTGTTGATAAAAGTGTaGAGCCAGCTCCAACAGCCA +
Preference number: 4 (lower is better)
Translates to: CSTEGCLPMHKVLQDPSKLLIKV*SQLQQP
Trigger: TGGCTGTTGGAGCTGGCTCCACACTTTTATCAACAA...CTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGAGACATGCTCCTCTCACGGGTCCTaGACCTTGGCCCTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LWWFRQRSPMFRSFVETCSSHGS*TLALLA
Trigger: AGCCAAAAGGGCCAAGGTCCAGGACCCGTGAGAGGA...GCATGTCTCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp ACAGGCCGCAGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTGCCAGTGTTTTGGCCTTCAGTaGCTAACTTTCCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: TGRSPLQSNQTFHRSWCQCFGLQ*LTFLLV
Trigger: AACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACA...CTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCTGCGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCCCCCACATGGTGTTTTaGCCTTCAGTGGCTAACTTT +
Preference number: 4 (lower is better)
Translates to: QQNQCLLEELSPRALARTPHMVF*PSVANF
Trigger: AAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGG...GGTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTCTCCCTCTGTCTGGTaGATTTTCACCACAGTTTCG +
Preference number: 4 (lower is better)
Translates to: CAHQTCPLVVSAEIPNVSSPSVW*IFTTVS
Trigger: CGAAACTGTGGTGAAAATTCACCAGACAGAGGGAGA...CGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp CTGCATCTGGCATGTGTTGAAATGCAATCATCATCACAGCAAAGCAGCCCTGGGCTCGAGCCTGCTCGATaGGCATCGACACAACAGTTT +
Preference number: 4 (lower is better)
Translates to: LHLACVEMQSSSQQSSPGLEPAR*ASTQQF
Trigger: AAACTGTTGTGTCGATGCTCATCGAGCAGGCTCGAG...CCCAGGGCTGCTTTGCTGTGATGATGATTGCATTTCAACACATGCCAGATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp AAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCCAAGCTTTCTGACACTGCGTaGCACCCTTTCAAACACTTT +
Preference number: 4 (lower is better)
Translates to: KTSACWKNCPHALLQEPKLSDTA*HPFKHF
Trigger: AAAGTGTTTGAAAGGGTGTCACGCAGTGTCAGAAAG...CTTGGGTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp GTCAATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGCCACTATCACCTTTCTaGCACTGCGTGACACCCTTT +
Preference number: 4 (lower is better)
Translates to: VNHQSLASLLAADKQGQGPLSPF*HCVTPF
Trigger: AAAGGGTGTCACGCAGTGTCAGAAAGGTGATAGTGG...CCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp CCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATCAGGAACCGTAGACTaGGGCAACTTGTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: PPHMVFWPSVANFPPCFPSGTVD*GNLSKA
Trigger: AGCCTTTGACAAGTTGCCTCAGTCTACGGTTCCTGA...TGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp GCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAAATGCTTAGAATTTCCTaGGAACAGCCGAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: AQSPPGSQQGCKCCGQREMLRIS*EQPKFP
Trigger: AGGAAACTTCGGCTGTTCTCAGGAAATTCTAAGCAT...TTCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TGCTGGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTATGCTTAGAATTTCCTaGGAACAGCCGAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: CWKWHAGLVSVLSEPTPTMLRIS*EQPKFP
Trigger: AGGAAACTTCGGCTGTTCTCAGGAAATTCTAAGCAT...AGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp GAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAAATGCTTAGAATTTCCTaGGAACAGCCGAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: ETLCPSDMPFGGFGRDPQMLRIS*EQPKFP
Trigger: AGGAAACTTCGGCTGTTCTCAGGAAATTCTAAGCAT...TTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGCTGTGGCCCCAGCAGTTACAGTCGCAGCTCTaGCAAGACCCTTGTAATTCA +
Preference number: 4 (lower is better)
Translates to: LFTPGSRPHWLTQLWPQQLQSQL*QDPCNS
Trigger: TGAATTACAAGGGTCTTGTCAGAGCTGCGACTGTAA...CTGCTGGGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp GGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTTTACAGTCGCAGCTCTaGCAAGACCCTTGTAATTCA +
Preference number: 4 (lower is better)
Translates to: GCLPMHKVLQDPSKDANALQSQL*QDPCNS
Trigger: TGAATTACAAGGGTCTTGTCAGAGCTGCGACTGTAA...AGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TCCCCAATGTTTCGTTCATTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGACTCTGCATAGAGGACTaGCGCAGGGTGTATGTGCAG +
Preference number: 4 (lower is better)
Translates to: SPMFRSFVETCLFTPGSRLCIED*RRVYVQ
Trigger: CTGCACATACACCCTGCGTCAGTCCTCTATGCAGAG...TCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAATGAACGAAACATTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252011.8
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp CCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGACTCTGCATAGAGGACTaGCGCAGGGTGTATGTGCAG +
Preference number: 4 (lower is better)
Translates to: PTWCFGLQWLTFLLVSHRLCIED*RRVYVQ
Trigger: CTGCACATACACCCTGCGTCAGTCCTCTATGCAGAG...TCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252011.8
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp CCACAAAGATATTCTGGATCTGCATCATGGCAGCGATGCTTAGAATTTCCTGAGAGTGAGCGTGCTGAGTaGGCCAACTCCCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: PQRYSGSASWQRCLEFPESERAE*ANSHSA
Trigger: GGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACT...CTCAGGAAATTCTAAGCATCGCTGCCATGATGCAGATCCAGAATATCTTTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp CACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCGCATCTGGCATGTGTTaGAATGCAATCATCATCACA +
Preference number: 4 (lower is better)
Translates to: HRRMPAHAQSPPGSQQGCASGMC*NAIIIT
Trigger: TGTGATGATGATTGCATTTCAACACATGCCAGATGC...GCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGGCAGCTTCTGCCTCTaGTGCTCTATGGAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: PTWCFGLQWLTFLLVSHRGSFCL*CSMERA
Trigger: TGCCCTTTCCATAGAGCAGCAGAGGCAGAAGCTGCC...TCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGCTGGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCACACATGTATCCCTTaGTGGATCACTGGTTTCATT +
Preference number: 4 (lower is better)
Translates to: CWKWHAGLVSVLSEPTPTHTCIP*WITGFI
Trigger: AATGAAACCAGTGATCCAGCAAGGGATACATGTGTG...AGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGAGACATGCGCTAGTGCTCGAGCCTaGTCGATGAGCATCGACACA +
Preference number: 4 (lower is better)
Translates to: LWWFRQRSPMFRSFVETCASARA*SMSIDT
Trigger: TGTGTCGATGCTCATCGAGCAGGCTCGAGCACTAGC...GCATGTCTCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGCTGTGGCCCCAGCAGTGTGATAGAGGTTTCTaGCACATTGGTGGCCACTAT +
Preference number: 4 (lower is better)
Translates to: LFTPGSRPHWLTQLWPQQCDRGF*HIGGHY
Trigger: ATAGTGGCCACCAATGTGGCAGAAACCTCTATCACA...CTGCTGGGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TCAATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGCCCTAGTGCTTTCAGCTaGAGGATGACAGGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: SITNPLQVSWLQINRDKGPSAFS*RMTGAK
Trigger: TTTGGCACCTGTCATCCTGCAGCTGAAAGCACTAGG...GCCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCATTCAAAGGAAACTCTaGAATTCTCATGCCAAGCGG +
Preference number: 4 (lower is better)
Translates to: LPMHKVLQDPSKDANAVGIQRKL*NSHAKR
Trigger: CCGCTTGGCATGAGAATTGCAGAGTTTCCTTTGAAT...GCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAGATATTCTGGATCTaGATCATGGCAGCGATGCTT +
Preference number: 4 (lower is better)
Translates to: HRRMPAHAQSPPGSQQGCKIFWI*IMAAML
Trigger: AAGCATCGCTGCCATGATGCAGATCCAGAATATCTT...GCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp ACACCTGGCAGCAGACCTCATTGGTTAACACAGCTGTGGCCCCAGCAGGGAAAGAAGATATTCTGGATCTaGATCATGGCAGCGATGCTT +
Preference number: 4 (lower is better)
Translates to: TPGSRPHWLTQLWPQQGKKIFWI*IMAAML
Trigger: AAGCATCGCTGCCATGATGCAGATCCAGAATATCTT...CTTTCCCTGCTGGGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGAGACAGAAGCCGGAGACAATaGACCTCAGAACCAGATCCG +
Preference number: 4 (lower is better)
Translates to: CPLVVSAEIPNVSFIRRDRSRRQ*TSEPDP
Trigger: CGGATCTGGTTCTGAGGTGCATTGTCTCCGGCTTCT...GTCTCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGACGCAGGGTGTATGTaGAGCTCATGGTCATCACGG +
Preference number: 4 (lower is better)
Translates to: PTWCFGLQWLTFLLVSHRDAGCM*SSWSSR
Trigger: CCGTGATGACCATGAGCTGCACATACACCCTGCGTC...TCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252011.8
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTGCAGCACAGAAGGATaGCTGCCCATGCACAAAGTC +
Preference number: 4 (lower is better)
Translates to: SDMPFGGFGRDPQCFVHSCSTEG*LPMHKV
Trigger: GACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCA...CGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp ACGGATGGTCCTATAAGCTCCAGTAGAATGAAACCTCGCTGCATTGGCGAAGAACTGCTGGAAGTGGCATaGTGGGTTAGTGAGCGTGCT +
Preference number: 4 (lower is better)
Translates to: TDGPISSSRMKPRCIGEELLEVA*WVSERA
Trigger: AGCACGCTCACTAACCCAGCATGCCACTTCCAGCAG...TTCTTCGCCAATGCAGCGAGGTTTCATTCTACTGGAGCTTATAGGACCATCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TCTGTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTGTTTGGGAGACCCTGTaGCCATCAGACATGCCCTTT +
Preference number: 4 (lower is better)
Translates to: SVHPTWCFGLQWLTFLLVVWETL*PSDMPF
Trigger: AAAGGGCATGTCTGATGGGCACAGGGTCTCCCAAAC...AACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GTCAATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGAACAAAACCAGTGCCTaGTGGAAGAACTGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: VNHQSLASLLAADKQGQGNKTSA*WKNCPH
Trigger: GTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTT...CCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CTGCATCTGGCATGTGTTGAAATGCAATCATCATCACAGCAAAGCAGCCCTGGGATTCTCGTGGCCAGCTaGTCGGTGCAGTCATCAAAG +
Preference number: 4 (lower is better)
Translates to: LHLACVEMQSSSQQSSPGILVAS*SVQSSK
Trigger: CTTTGATGACTGCACCGACCAGCTGGCCACGAGAAT...CCCAGGGCTGCTTTGCTGTGATGATGATTGCATTTCAACACATGCCAGATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TCAATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGCTACAAGGTCCTCTCGTaGGCTTCATCCAGCATGATG +
Preference number: 4 (lower is better)
Translates to: SITNPLQVSWLQINRDKGYKVLS*ASSSMM
Trigger: CATCATGCTGGATGAAGCCCACGAGAGGACCTTGTA...GCCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTTGTCTGCATCCAGAGTaGCTGAAGCTACAATCAATC +
Preference number: 4 (lower is better)
Translates to: GCLPMHKVLQDPSKDANACLHPE*LKLQSI
Trigger: GATTGATTGTAGCTTCAGCCACTCTGGATGCAGACA...AGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGCTGGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTTCTGGATCTGCATCATaGCAGCGATGCTTAGAATTT +
Preference number: 4 (lower is better)
Translates to: CWKWHAGLVSVLSEPTPTSGSAS*QRCLEF
Trigger: AAATTCTAAGCATCGCTGCCATGATGCAGATCCAGA...AGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCTCTGGATCTGCATCATaGCAGCGATGCTTAGAATTT +
Preference number: 4 (lower is better)
Translates to: LPMHKVLQDPSKDANAVGSGSAS*QRCLEF
Trigger: AAATTCTAAGCATCGCTGCCATGATGCAGATCCAGA...GCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGACCACAAAGATATTCTaGATCTGCATCATGGCAGCG +
Preference number: 4 (lower is better)
Translates to: DACPCTKSSRIPARMQMLTTKIF*ICIMAA
Trigger: CGCTGCCATGATGCAGATCCAGAATATCTTTGTGGT...CAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGCATGCCGTGAGACTTCTGGTTTaGGGGGACCACAAAGATATT +
Preference number: 4 (lower is better)
Translates to: QWLTFLLVSHRAGPGLHAVRLLV*GDHKDI
Trigger: AATATCTTTGTGGTCCCCCCAAACCAGAAGTCTCAC...GGCATGCAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATTTGTTGATAAAAGTGTaGAGCCAGCTCCAACAGCCA +
Preference number: 4 (lower is better)
Translates to: STEGCLPMHKVLQDPSKDLLIKV*SQLQQP
Trigger: TGGCTGTTGGAGCTGGCTCCACACTTTTATCAACAA...ATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGCTGTGGCCCCAGCAGTTGTTGATAAAAGTGTaGAGCCAGCTCCAACAGCCA +
Preference number: 4 (lower is better)
Translates to: LFTPGSRPHWLTQLWPQQLLIKV*SQLQQP
Trigger: TGGCTGTTGGAGCTGGCTCCACACTTTTATCAACAA...CTGCTGGGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGCTGGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTTGTTTTGGCCTTCAGTaGCTAACTTTCCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: CWKWHAGLVSVLSEPTPTCFGLQ*LTFLLV
Trigger: AACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACA...AGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCTGTTTTGGCCTTCAGTaGCTAACTTTCCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: LPMHKVLQDPSKDANAVGCFGLQ*LTFLLV
Trigger: AACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACA...GCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGCCCCACATGGTGTTTTaGCCTTCAGTGGCTAACTTT +
Preference number: 4 (lower is better)
Translates to: CAHQTCPLVVSAEIPNVSPHMVF*PSVANF
Trigger: AAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGG...CGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp ATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTCCCCACATGGTGTTTTaGCCTTCAGTGGCTAACTTT +
Preference number: 4 (lower is better)
Translates to: MPAHAQSPPGSQQGCKCCPHMVF*PSVANF
Trigger: AAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGG...ACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGAGACTCTGTCCACCCCACATaGTGTTTTGGCCTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: CPLVVSAEIPNVSFIRRDSVHPT*CFGLQW
Trigger: CCACTGAAGGCCAAAACACCATGTGGGGTGGACAGA...GTCTCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGAGACATGCCCTTTGGTaGTTTCGGCAGAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: SDMPFGGFGRDPQCFVHSRHALW*FRQRSP
Trigger: TGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCT...CGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGAGACATGCACAGCAAAGCAGCCCTaGGGCAACAAAACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LWWFRQRSPMFRSFVETCTAKQP*GNKTSA
Trigger: GGCACTGGTTTTGTTGCCCCAGGGCTGCTTTGCTGT...GCATGTCTCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGTTTGGTGCCAAAAGTaGCACATCCAAACTAATATC +
Preference number: 4 (lower is better)
Translates to: LVSVLSEPTPTLPAAAQKVWCQK*HIQTNI
Trigger: GATATTAGTTTGGATGTGCCACTTTTGGCACCAAAC...CTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGCTGGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTAATGACATACACGTTTaGTGCCAAAAGTGGCACATC +
Preference number: 4 (lower is better)
Translates to: CWKWHAGLVSVLSEPTPTNDIHV*CQKWHI
Trigger: GATGTGCCACTTTTGGCACCAAACGTGTATGTCATT...AGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp ACAGGCCGCAGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTGCCAGTTTCGACAGTTGATTTaGTATAATCTGGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: TGRSPLQSNQTFHRSWCQFRQLI*YNLEQD
Trigger: GTCCTGTTCCAGATTATATCAAATCAACTGTCGAAA...CTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCTGCGGCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TCTGAGCTGATGAACTCTCCTGAGTGCTCAGCTAGCGTGGCACCAGGACCTGGCTTTCGACAGTTGATTTaGTATAATCTGGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: SELMNSPECSASVAPGPGFRQLI*YNLEQD
Trigger: GTCCTGTTCCAGATTATATCAAATCAACTGTCGAAA...GCCAGGTCCTGGTGCCACGCTAGCTGAGCACTCAGGAGAGTTCATCAGCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TTCATTTGCTCAAAGGAAGGCAGTCCTGCATACATGGGGAGAACTCGGAGGTGTTCAGGAACCGTAGACTaGGGCAACTTGTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: FICSKEGSPAYMGRTRRCSGTVD*GNLSKA
Trigger: AGCCTTTGACAAGTTGCCTCAGTCTACGGTTCCTGA...ACACCTCCGAGTTCTCCCCATGTATGCAGGACTGCCTTCCTTTGAGCAAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGGACTTCCTGGGCACTTaGAACTTGACAAGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: CAHQTCPLVVSAEIPNVSDFLGT*NLTRSF
Trigger: AAAGCTTCTTGTCAAGTTTCAAGTGCCCAGGAAGTC...CGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGCTAAAGAGGAGGTGGCCAGCTGGTCGGTaGAGTCATCAAAGCGGATGC +
Preference number: 4 (lower is better)
Translates to: SYRSLGHPNCCEFLLKRRWPAGR*SHQSGC
Trigger: GCATCCGCTTTGATGACTGCACCGACCAGCTGGCCA...CCTCCTCTTTAGCAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GCGAAGAAGCCGGAGACAATGCACCTCAGAACCAGATCCGGGTCACCTTCACTACACACATGTATCCCTTaGTGGATCACTGGTTTCATT +
Preference number: 4 (lower is better)
Translates to: AKKPETMHLRTRSGSPSLHTCIP*WITGFI
Trigger: AATGAAACCAGTGATCCAGCAAGGGATACATGTGTG...TAGTGAAGGTGACCCGGATCTGGTTCTGAGGTGCATTGTCTCCGGCTTCTTCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TATATTGAGCATAGTGAGGTGGTCGCCCTCCTCCACAGCAAATTTACGGTGCACAAAGGAAGGCAGTCCTaGATACATGGGGAGAACTCG +
Preference number: 4 (lower is better)
Translates to: YIEHSEVVALLHSKFTVHKGRQS*IHGENS
Trigger: CGAGTTCTCCCCATGTATGCAGGACTGCCTTCCTTT...GTGCACCGTAAATTTGCTGTGGAGGAGGGCGACCACCTCACTATGCTCAATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GGATCTGAGCTGATGAACTCTCCTGAGTGCTCAGCTAGCGTGGCACCAGGACCTTCAAACACTTTCATTTaGTCAAAGGAAGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GSELMNSPECSASVAPGPSNTFI*SKEGSP
Trigger: AGGACTGCCTTCCTTTGAGCAAATGAAAGTGTTTGA...AGGTCCTGGTGCCACGCTAGCTGAGCACTCAGGAGAGTTCATCAGCTCAGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTGCCAGCTCACCCCATCAAACACTTTCATTTaGTCAAAGGAAGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SPLQSNQTFHRSWCQLTPSNTFI*SKEGSP
Trigger: AGGACTGCCTTCCTTTGAGCAAATGAAAGTGTTTGA...TGGGGTGAGCTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp ATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTTGTGATAGAGGTTTCTaGCACATTGGTGGCCACTAT +
Preference number: 4 (lower is better)
Translates to: MPAHAQSPPGSQQGCKCCCDRGF*HIGGHY
Trigger: ATAGTGGCCACCAATGTGGCAGAAACCTCTATCACA...ACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCCAAGATTCAAAGGAAACTCTaGAATTCTCATGCCAAGCGG +
Preference number: 4 (lower is better)
Translates to: KTSACWKNCPHALLQEPKIQRKL*NSHAKR
Trigger: CCGCTTGGCATGAGAATTGCAGAGTTTCCTTTGAAT...CTTGGGTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CTGCATCTGGCATGTGTTGAAATGCAATCATCATCACAGCAAAGCAGCCCTGGGACGGTGCACTCGAATTaGGTGAGACTTCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: LHLACVEMQSSSQQSSPGTVHSN*VRLLVW
Trigger: CCAAACCAGAAGTCTCACGCAATTCGAGTGCACCGT...CCCAGGGCTGCTTTGCTGTGATGATGATTGCATTTCAACACATGCCAGATGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GCACTACACTCTGAGAGGACGCTAAGCCTACCTGTGAAACACAAATCCTCTGCTAGAATGAAACCTCGCTaGATTGGCGAAGAAGCCGGA +
Preference number: 4 (lower is better)
Translates to: ALHSERTLSLPVKHKSSARMKPR*IGEEAG
Trigger: TCCGGCTTCTTCGCCAATGCAGCGAGGTTTCATTCT...AGCAGAGGATTTGTGTTTCACAGGTAGGCTTAGCGTCCTCTCAGAGTGTAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp ATGCCGCTGATTGTGATAGAGGTTTCTGCCACATTGGTGGCCACTATCACCTTTGGGCAACAAAACCAGTaGCTGCTGGAAGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: MPLIVIEVSATLVATITFGQQNQ*LLEELS
Trigger: GGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGCCC...AAAGGTGATAGTGGCCACCAATGTGGCAGAAACCTCTATCACAATCAGCGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGATTCTCGTGGCCAGCTaGTCGGTGCAGTCATCAAAG +
Preference number: 4 (lower is better)
Translates to: FVETCLFTPGSRPHWLTQILVAS*SVQSSK
Trigger: CTTTGATGACTGCACCGACCAGCTGGCCACGAGAAT...CTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGTTTTTAGCAAGCCAATaGCAATGTCAGTGTACAAGG +
Preference number: 4 (lower is better)
Translates to: HAQSPPGSQQGCKCCGQRFLASQ*QCQCTR
Trigger: CCTTGTACACTGACATTGCCATTGGCTTGCTAAAAA...CCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTGCCAGCTCACCCCATTTTTAGCAAGCCAATaGCAATGTCAGTGTACAAGG +
Preference number: 4 (lower is better)
Translates to: SPLQSNQTFHRSWCQLTPFLASQ*QCQCTR
Trigger: CCTTGTACACTGACATTGCCATTGGCTTGCTAAAAA...TGGGGTGAGCTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCATTCAAGCAGCATTTTaGCAAACATGGGATTCAAAG +
Preference number: 4 (lower is better)
Translates to: KWHAGLVSVLSEPTPTLPIQAAF*QTWDSK
Trigger: CTTTGAATCCCATGTTTGCCAAAATGCTGCTTGAAT...GGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAAACCACAAAGATATTCTaGATCTGCATCATGGCAGCG +
Preference number: 4 (lower is better)
Translates to: RRMPAHAQSPPGSQQGCKTTKIF*ICIMAA
Trigger: CGCTGCCATGATGCAGATCCAGAATATCTTTGTGGT...TTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp ATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTACCACAAAGATATTCTaGATCTGCATCATGGCAGCG +
Preference number: 4 (lower is better)
Translates to: MPAHAQSPPGSQQGCKCCTTKIF*ICIMAA
Trigger: CGCTGCCATGATGCAGATCCAGAATATCTTTGTGGT...ACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp ATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGTGAGACTTCTGGTTTaGGGGGACCACAAAGATATT +
Preference number: 4 (lower is better)
Translates to: MPAHAQSPPGSQQGCKCCVRLLV*GDHKDI
Trigger: AATATCTTTGTGGTCCCCCCAAACCAGAAGTCTCAC...ACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGAGACGCCAGGCCGATTCAATaGCAGTCACATCTCTCATGT +
Preference number: 4 (lower is better)
Translates to: CPLVVSAEIPNVSFIRRDARPIQ*QSHLSC
Trigger: ACATGAGAGATGTGACTGCCATTGAATCGGCCTGGC...GTCTCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGAGACATGCTCTGTCCACCCCACATaGTGTTTTGGCCTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: LWWFRQRSPMFRSFVETCSVHPT*CFGLQW
Trigger: CCACTGAAGGCCAAAACACCATGTGGGGTGGACAGA...GCATGTCTCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TCCCCAATGTTTCGTTCATTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGAAGACATGCCCTTTGGTaGTTTCGGCAGAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: SPMFRSFVETCLFTPGSRRHALW*FRQRSP
Trigger: TGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCT...TCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAATGAACGAAACATTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGATCAGACATGCCCTTTaGTGGTTTCGGCAGAGATCC +
Preference number: 4 (lower is better)
Translates to: SDMPFGGFGRDPQCFVHSIRHAL*WFRQRS
Trigger: GGATCTCTGCCGAAACCACCAAAGGGCATGTCTGAT...CGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGAGACATCAGACATGCCCTTTaGTGGTTTCGGCAGAGATCC +
Preference number: 4 (lower is better)
Translates to: CPLVVSAEIPNVSFIRRDIRHAL*WFRQRS
Trigger: GGATCTCTGCCGAAACCACCAAAGGGCATGTCTGAT...GTCTCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GTGATGTTCCTGAGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGCGTGGCACCAGGACCTaGCACTACACTCTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: VMFLSYRSLGHPNCCEFLRGTRT*HYTLRG
Trigger: TCCTCTCAGAGTGTAGTGCCAGGTCCTGGTGCCACG...CAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCTCAGGAACATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAAGTTTGGTGCCAAAAGTaGCACATCCAAACTAATATC +
Preference number: 4 (lower is better)
Translates to: ETLCPSDMPFGGFGRDPQVWCQK*HIQTNI
Trigger: GATATTAGTTTGGATGTGCCACTTTTGGCACCAAAC...TTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR CAA 72 bp ACAATGCCGCTGATTGTGATAGAGGTTTCTGCCACATaGGTGGCCACTATCACCTTTCTGACACTGCGTGAC +
Preference number: 4 (lower is better)
Translates to: TMPLIVIEVSAT*VATITFLTLRD
Trigger: GTCACGCAGTGTCAGAAAGGTGATAGTGGCCACCAATGTGGCAGAAACCTCTATCACAATCAGCGGCATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TCCCCAATGTTTCGTTCATTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGAGCTTCTGCAAGGTACTaGGGAATCTGTGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SPMFRSFVETCLFTPGSRASARY*GICVLF
Trigger: GAAGAGCACACAGATTCCTCAGTACCTTGCAGAAGC...TCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAATGAACGAAACATTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TGCTGGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTTTTCGACAGTTGATTTaGTATAATCTGGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: CWKWHAGLVSVLSEPTPTFRQLI*YNLEQD
Trigger: GTCCTGTTCCAGATTATATCAAATCAACTGTCGAAA...AGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGATTTCGACAGTTGATTTaGTATAATCTGGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: CTKSSRIPARMQMLWAAGFRQLI*YNLEQD
Trigger: GTCCTGTTCCAGATTATATCAAATCAACTGTCGAAA...TCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp GCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAACACAGTTTCGACAGTTaGTTTGATATAATCTGGAAC +
Preference number: 4 (lower is better)
Translates to: AQSPPGSQQGCKCCGQREHSFDS*FDIIWN
Trigger: GTTCCAGATTATATCAAATCAACTGTCGAAACTGTG...TTCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TCCCCAATGTTTCGTTCATTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGACCACTATCACCTTTCTaGCACTGCGTGACACCCTTT +
Preference number: 4 (lower is better)
Translates to: SPMFRSFVETCLFTPGSRPLSPF*HCVTPF
Trigger: AAAGGGTGTCACGCAGTGTCAGAAAGGTGATAGTGG...TCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAATGAACGAAACATTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp CCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAAGTAACTCCAAGGCTTaGACCATCGACTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PTWCFGLQWLTFLLVSHRSNSKA*TIDCAG
Trigger: TCCAGCACAGTCGATGGTTCAAGCCTTGGAGTTACT...TCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp GCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAATGGGCACTTGAAACTTaGCAAGAAGCTTTTTCAATT +
Preference number: 4 (lower is better)
Translates to: AQSPPGSQQGCKCCGQREWALET*QEAFSI
Trigger: AATTGAAAAAGCTTCTTGTCAAGTTTCAAGTGCCCA...TTCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TCAATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGCGCATCCAAACTGTTGTaGATTCCTGCTAAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: SITNPLQVSWLQINRDKGASKLL*IPAKEE
Trigger: CTCCTCTTTAGCAGGAATTCACAACAGTTTGGATGC...GCCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TCCAGTAGAATGAAACCTCGCTGCATTGGCGAAGAAGCCGGAGACAATGCACCTGCATCCAAACTGTTGTaGATTCCTGCTAAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: SSRMKPRCIGEEAGDNAPASKLL*IPAKEE
Trigger: CTCCTCTTTAGCAGGAATTCACAACAGTTTGGATGC...AGGTGCATTGTCTCCGGCTTCTTCGCCAATGCAGCGAGGTTTCATTCTACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TCCCCAATGTTTCGTTCATTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGAAATACCGGCAGCTTCTaGCTCTGCTGCTCTATGGAA +
Preference number: 4 (lower is better)
Translates to: SPMFRSFVETCLFTPGSRNTGSF*LCCSME
Trigger: TTCCATAGAGCAGCAGAGGCAGAAGCTGCCGGTATT...TCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAATGAACGAAACATTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GTGATGTTCCTGAGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGGTCTCTTCATCCCAGTaGGAGCTAGTGCTCGAGCCT +
Preference number: 4 (lower is better)
Translates to: VMFLSYRSLGHPNCCEFLVSSSQ*ELVLEP
Trigger: AGGCTCGAGCACTAGCTCGCACTGGGATGAAGAGAC...CAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCTCAGGAACATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGCTGTGGCCCCAGCAGTCAAACACTTTCATTTaGTCAAAGGAAGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LFTPGSRPHWLTQLWPQQSNTFI*SKEGSP
Trigger: AGGACTGCCTTCCTTTGAGCAAATGAAAGTGTTTGA...CTGCTGGGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp ATGCCGCTGATTGTGATAGAGGTTTCTGCCACATTGGTGGCCACTATCACCTTTCCTAGTGCTTTCAGCTaGAGGATGACAGGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: MPLIVIEVSATLVATITFPSAFS*RMTGAK
Trigger: TTTGGCACCTGTCATCCTGCAGCTGAAAGCACTAGG...AAAGGTGATAGTGGCCACCAATGTGGCAGAAACCTCTATCACAATCAGCGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp ACGGATGGTCCTATAAGCTCCAGTAGAATGAAACCTCGCTGCATTGGCGAAGAAAGAATGAAACCTCGCTaGATTGGCGAAGAAGCCGGA +
Preference number: 4 (lower is better)
Translates to: TDGPISSSRMKPRCIGEERMKPR*IGEEAG
Trigger: TCCGGCTTCTTCGCCAATGCAGCGAGGTTTCATTCT...TTCTTCGCCAATGCAGCGAGGTTTCATTCTACTGGAGCTTATAGGACCATCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CACTTGAAACTTGACAAGAAGCTTTTTCAATTGTTCTCTTACAGTCGCAGCTCTGACGCCAGCAGTCCCTaGAGCTGTAGCTGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: HLKLDKKLFQLFSYSRSSDASSP*SCSCGL
Trigger: GAGCCCACAGCTACAGCTGCAGGGACTGCTGGCGTC...AGAGCTGCGACTGTAAGAGAACAATTGAAAAAGCTTCTTGTCAAGTTTCAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GACCTTGGCCCTTTTGGCTTTCAGAGACAGGTGCGTTCCTTGTTGATAAAAGTGCAATCACCAATCCCTTaGAAGTCTCCTGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: DLGPFGFQRQVRSLLIKVQSPIP*KSPGCR
Trigger: TCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTG...CACTTTTATCAACAAGGAACGCACCTGTCTCTGAAAGCCAAAAGGGCCAAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGCTGGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTTGGCATGTGTTGAAATaGAATCATCATCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: CWKWHAGLVSVLSEPTPTWHVLK*NHHHSK
Trigger: TTTGCTGTGATGATGATTGCATTTCAACACATGCCA...AGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCTGGCATGTGTTGAAATaGAATCATCATCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: HRRMPAHAQSPPGSQQGCWHVLK*NHHHSK
Trigger: TTTGCTGTGATGATGATTGCATTTCAACACATGCCA...GCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGCTGGACATACACGTTTGGTaGCAAAAGTGGCACATCCAA +
Preference number: 4 (lower is better)
Translates to: NHQSLASLLAADKQGQGLDIHVW*QKWHIQ
Trigger: TTGGATGTGCCACTTTTGGCACCAAACGTGTATGTC...CAGCCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCGACATACACGTTTGGTaGCAAAAGTGGCACATCCAA +
Preference number: 4 (lower is better)
Translates to: VHPTWCFGLQWLTFLLVSDIHVW*QKWHIQ
Trigger: TTGGATGTGCCACTTTTGGCACCAAACGTGTATGTC...GGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TCCCCAATGTTTCGTTCATTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGATACAAGGTCCTCTCGTaGGCTTCATCCAGCATGATG +
Preference number: 4 (lower is better)
Translates to: SPMFRSFVETCLFTPGSRYKVLS*ASSSMM
Trigger: CATCATGCTGGATGAAGCCCACGAGAGGACCTTGTA...TCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAATGAACGAAACATTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGACATGTATCCCTTGCTaGATCACTGGTTTCATTTTG +
Preference number: 4 (lower is better)
Translates to: DACPCTKSSRIPARMQMLTCIPC*ITGFIL
Trigger: CAAAATGAAACCAGTGATCCAGCAAGGGATACATGT...CAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GTGATGTTCCTGAGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGGCAGTCCTGCATACATaGGGAGAACTCGGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: VMFLSYRSLGHPNCCEFLAVLHT*GELGGV
Trigger: GACACCTCCGAGTTCTCCCCATGTATGCAGGACTGC...CAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCTCAGGAACATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CGCAGCTCTGACAAGACCCTTGTAATTCAGGAAATGTTCCTGACACCATTTAGAAACCATCGACTGTGCTaGAGGGGGCGACATGAAGTG +
Preference number: 4 (lower is better)
Translates to: RSSDKTLVIQEMFLTPFRNHRLC*RGRHEV
Trigger: CACTTCATGTCGCCCCCTCCAGCACAGTCGATGGTT...TCTAAATGGTGTCAGGAACATTTCCTGAATTACAAGGGTCTTGTCAGAGCTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484417.5
CDS-3UTR CCA 90 bp CCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCAACCACAAAGATATTCTaGATCTGCATCATGGCAGCG +
Preference number: 4 (lower is better)
Translates to: PPHMVFWPSVANFPPCFPTTKIF*ICIMAA
Trigger: CGCTGCCATGATGCAGATCCAGAATATCTTTGTGGT...TGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTGTATGTGCAGCTCATaGTCATCACGGATGGTCCTA +
Preference number: 4 (lower is better)
Translates to: SDMPFGGFGRDPQCFVHSCMCSS*SSRMVL
Trigger: TAGGACCATCCGTGATGACCATGAGCTGCACATACA...CGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252011.8
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp ATGCCGCTGATTGTGATAGAGGTTTCTGCCACATTGGTGGCCACTATCACCTTTATCAGACATGCCCTTTaGTGGTTTCGGCAGAGATCC +
Preference number: 4 (lower is better)
Translates to: MPLIVIEVSATLVATITFIRHAL*WFRQRS
Trigger: GGATCTCTGCCGAAACCACCAAAGGGCATGTCTGAT...AAAGGTGATAGTGGCCACCAATGTGGCAGAAACCTCTATCACAATCAGCGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGCTAAAGAGGAGGACAGCAAAGCAGCCCTaGGGCAACAAAACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: SYRSLGHPNCCEFLLKRRTAKQP*GNKTSA
Trigger: GGCACTGGTTTTGTTGCCCCAGGGCTGCTTTGCTGT...CCTCCTCTTTAGCAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp GGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTCACAGTTTCGACAGTTaGTTTGATATAATCTGGAAC +
Preference number: 4 (lower is better)
Translates to: GCLPMHKVLQDPSKDANAHSFDS*FDIIWN
Trigger: GTTCCAGATTATATCAAATCAACTGTCGAAACTGTG...AGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGTCTCCCTCTGTCTGGTaGATTTTCACCACAGTTTCG +
Preference number: 4 (lower is better)
Translates to: FVETCLFTPGSRPHWLTQSPSVW*IFTTVS
Trigger: CGAAACTGTGGTGAAAATTCACCAGACAGAGGGAGA...CTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TCTGTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTTACAGTCGCAGCTCTaGCAAGACCCTTGTAATTCA +
Preference number: 4 (lower is better)
Translates to: SVHPTWCFGLQWLTFLLVLQSQL*QDPCNS
Trigger: TGAATTACAAGGGTCTTGTCAGAGCTGCGACTGTAA...AACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TTCATTTGCTCAAAGGAAGGCAGTCCTGCATACATGGGGAGAACTCGGAGGTGTTTACAGTCGCAGCTCTaGCAAGACCCTTGTAATTCA +
Preference number: 4 (lower is better)
Translates to: FICSKEGSPAYMGRTRRCLQSQL*QDPCNS
Trigger: TGAATTACAAGGGTCTTGTCAGAGCTGCGACTGTAA...ACACCTCCGAGTTCTCCCCATGTATGCAGGACTGCCTTCCTTTGAGCAAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGAGACGACTTCCTGGGCACTTaGAACTTGACAAGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: CPLVVSAEIPNVSFIRRDDFLGT*NLTRSF
Trigger: AAAGCTTCTTGTCAAGTTTCAAGTGCCCAGGAAGTC...GTCTCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TTCCTGAGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGCTAAAGGTCTCTTCATCCCAGTaGGAGCTAGTGCTCGAGCCT +
Preference number: 4 (lower is better)
Translates to: FLSYRSLGHPNCCEFLLKVSSSQ*ELVLEP
Trigger: AGGCTCGAGCACTAGCTCGCACTGGGATGAAGAGAC...CTTTAGCAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCTCAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp ATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTTCAAACACTTTCATTTaGTCAAAGGAAGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: MPAHAQSPPGSQQGCKCCSNTFI*SKEGSP
Trigger: AGGACTGCCTTCCTTTGAGCAAATGAAAGTGTTTGA...ACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GACCTTGGCCCTTTTGGCTTTCAGAGACAGGTGCGTTCCTTGTTGATAAAAGTGGCCAAATTACTACGCTaGATCTCAGGAACCGTAGAC +
Preference number: 4 (lower is better)
Translates to: DLGPFGFQRQVRSLLIKVAKLLR*ISGTVD
Trigger: GTCTACGGTTCCTGAGATGCAGCGTAGTAATTTGGC...CACTTTTATCAACAAGGAACGCACCTGTCTCTGAAAGCCAAAAGGGCCAAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GACCTTGGCCCTTTTGGCTTTCAGAGACAGGTGCGTTCCTTGTTGATAAAAGTGACTCTGCAATTCTCATaGCAAGCGGTTCAGTTAGGC +
Preference number: 4 (lower is better)
Translates to: DLGPFGFQRQVRSLLIKVTLQFS*QAVQLG
Trigger: GCCTAACTGAACCGCTTGGCATGAGAATTGCAGAGT...CACTTTTATCAACAAGGAACGCACCTGTCTCTGAAAGCCAAAAGGGCCAAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TCAATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGCAAGATATTCTGGATCTaGATCATGGCAGCGATGCTT +
Preference number: 4 (lower is better)
Translates to: SITNPLQVSWLQINRDKGKIFWI*IMAAML
Trigger: AAGCATCGCTGCCATGATGCAGATCCAGAATATCTT...GCCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AAAGCAGACACACAACACATGACCGACATGAAGTGGAACCTGAGGACATTGTCAACGGTGCACTCGAATTaGGTGAGACTTCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: KADTQHMTDMKWNLRTLSTVHSN*VRLLVW
Trigger: CCAAACCAGAAGTCTCACGCAATTCGAGTGCACCGT...TGACAATGTCCTCAGGTTCCACTTCATGTCGGTCATGTGTTGTGTGTCTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652169.1
CDS-3UTR GCA 90 bp AATGACATACACGTTTGGTGCCAAAAGTGGCACATCCAAACTAATATCAGTATATTCCACAGGAGCTGGTaGCAGCTCACCCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: NDIHVWCQKWHIQTNISIFHRSW*QLTPPG
Trigger: CCCAGGTGGGGTGAGCTGGCACCAGCTCCTGTGGAA...TATACTGATATTAGTTTGGATGTGCCACTTTTGGCACCAAACGTGTATGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGCTAAAGAGGAGGCAGCAAGGATGCAAATaGTGTGGGCAGCGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: SYRSLGHPNCCEFLLKRRQQGCK*CGQREE
Trigger: TTCTTCCCGCTGCCCACAGCATTTGCATCCTTGCTG...CCTCCTCTTTAGCAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CACTTGAAACTTGACAAGAAGCTTTTTCAATTGTTCTCTTACAGTCGCAGCTCTCCAGGACTGCATGCCTaGTGGAAGTGGCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: HLKLDKKLFQLFSYSRSSPGLHA*WKWHAG
Trigger: CCCAGCATGCCACTTCCAGCAGGCATGCAGTCCTGG...AGAGCTGCGACTGTAAGAGAACAATTGAAAAAGCTTCTTGTCAAGTTTCAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GTGATGTTCCTGAGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGGGGCAACAAAACCAGTaGCTGCTGGAAGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: VMFLSYRSLGHPNCCEFLGQQNQ*LLEELS
Trigger: GGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGCCC...CAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCTCAGGAACATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TTCATTTGCTCAAAGGAAGGCAGTCCTGCATACATGGGGAGAACTCGGAGGTGTTGTCTGCATCCAGAGTaGCTGAAGCTACAATCAATC +
Preference number: 4 (lower is better)
Translates to: FICSKEGSPAYMGRTRRCCLHPE*LKLQSI
Trigger: GATTGATTGTAGCTTCAGCCACTCTGGATGCAGACA...ACACCTCCGAGTTCTCCCCATGTATGCAGGACTGCCTTCCTTTGAGCAAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TGCTTAGAATTTCCTGAGAACAGCCGAAGTTTCCTGATTCAAGCAGCATTTTGGTTGAGCATAGTGAGGTaGTCGCCCTCCTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: CLEFPENSRSFLIQAAFWLSIVR*SPSSTA
Trigger: TGCTGTGGAGGAGGGCGACCACCTCACTATGCTCAA...CCAAAATGCTGCTTGAATCAGGAAACTTCGGCTGTTCTCAGGAAATTCTAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GTGATGTTCCTGAGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGGAAACCTCGCTGCATTaGCGAAGAAGCCGGAGACAA +
Preference number: 4 (lower is better)
Translates to: VMFLSYRSLGHPNCCEFLETSLH*RRSRRQ
Trigger: TTGTCTCCGGCTTCTTCGCCAATGCAGCGAGGTTTC...CAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCTCAGGAACATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AGCCGAAGTTTCCTGATTCAAGCAGCATTTTGGCAAACATGGGATTCAAAGGAACTGGAAGTGGCATGCTaGGTTAGTGAGCGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SRSFLIQAAFWQTWDSKELEVAC*VSERAE
Trigger: CTCAGCACGCTCACTAACCCAGCATGCCACTTCCAG...TTCCTTTGAATCCCATGTTTGCCAAAATGCTGCTTGAATCAGGAAACTTCGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TTCCTGAGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGCTAAAGGGACTGCATGCCTGCTaGAAGTGGCATGCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: FLSYRSLGHPNCCEFLLKGLHAC*KWHAGL
Trigger: TAACCCAGCATGCCACTTCCAGCAGGCATGCAGTCC...CTTTAGCAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCTCAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TCCCCAATGTTTCGTTCATTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGACCCCACATGGTGTTTTaGCCTTCAGTGGCTAACTTT +
Preference number: 4 (lower is better)
Translates to: SPMFRSFVETCLFTPGSRPHMVF*PSVANF
Trigger: AAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGG...TCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAATGAACGAAACATTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCAATGACATACACGTTTaGTGCCAAAAGTGGCACATC +
Preference number: 4 (lower is better)
Translates to: VHPTWCFGLQWLTFLLVSNDIHV*CQKWHI
Trigger: GATGTGCCACTTTTGGCACCAAACGTGTATGTCATT...GGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CTGCATCTGGCATGTGTTGAAATGCAATCATCATCACAGCAAAGCAGCCCTGGGATGACCGACATGAAGTaGAACCTGAGGACATTGTCA +
Preference number: 4 (lower is better)
Translates to: LHLACVEMQSSSQQSSPGMTDMK*NLRTLS
Trigger: TGACAATGTCCTCAGGTTCCACTTCATGTCGGTCAT...CCCAGGGCTGCTTTGCTGTGATGATGATTGCATTTCAACACATGCCAGATGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652169.1
CDS-3UTR TCA 90 bp TTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGTTACAGTCGCAGCTCTaGCAAGACCCTTGTAATTCA +
Preference number: 4 (lower is better)
Translates to: FVETCLFTPGSRPHWLTQLQSQL*QDPCNS
Trigger: TGAATTACAAGGGTCTTGTCAGAGCTGCGACTGTAA...CTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TTCCTGAGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGCTAAAGGTCTCTCTTCAGAGATaGTTACACCTGGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: FLSYRSLGHPNCCEFLLKVSLQR*LHLAPL
Trigger: CAGAGGGGCCAGGTGTAAGCATCTCTGAAGAGAGAC...CTTTAGCAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCTCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AGCCGAAGTTTCCTGATTCAAGCAGCATTTTGGCAAACATGGGATTCAAAGGAATGTCCAGCCGGCTTCTaGAAGGTACTGAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: SRSFLIQAAFWQTWDSKECPAGF*KVLRNL
Trigger: CAGATTCCTCAGTACCTTGCAGAAGCCGGCTGGACA...TTCCTTTGAATCCCATGTTTGCCAAAATGCTGCTTGAATCAGGAAACTTCGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp GCACTACACTCTGAGAGGACGCTAAGCCTACCTGTGAAACACAAATCCTCTGCTATTCAAAGGAAACTCTaGAATTCTCATGCCAAGCGG +
Preference number: 4 (lower is better)
Translates to: ALHSERTLSLPVKHKSSAIQRKL*NSHAKR
Trigger: CCGCTTGGCATGAGAATTGCAGAGTTTCCTTTGAAT...AGCAGAGGATTTGTGTTTCACAGGTAGGCTTAGCGTCCTCTCAGAGTGTAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AGCCGAAGTTTCCTGATTCAAGCAGCATTTTGGCAAACATGGGATTCAAAGGAACAGCAAGGATGCAAATaGTGTGGGCAGCGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: SRSFLIQAAFWQTWDSKEQQGCK*CGQREE
Trigger: TTCTTCCCGCTGCCCACAGCATTTGCATCCTTGCTG...TTCCTTTGAATCCCATGTTTGCCAAAATGCTGCTTGAATCAGGAAACTTCGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AATGACATACACGTTTGGTGCCAAAAGTGGCACATCCAAACTAATATCAGTATAAGCCAACTCCCACTCTaGCCGCTGCAGCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: NDIHVWCQKWHIQTNISISQLPL*PLQHRR
Trigger: CCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCT...TATACTGATATTAGTTTGGATGTGCCACTTTTGGCACCAAACGTGTATGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TTCCTGAGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGCTAAAGGTTTGGGAGACCCTGTaGCCATCAGACATGCCCTTT +
Preference number: 4 (lower is better)
Translates to: FLSYRSLGHPNCCEFLLKVWETL*PSDMPF
Trigger: AAAGGGCATGTCTGATGGGCACAGGGTCTCCCAAAC...CTTTAGCAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCTCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp ATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTTGGCATGTGTTGAAATaGAATCATCATCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: MPAHAQSPPGSQQGCKCCWHVLK*NHHHSK
Trigger: TTTGCTGTGATGATGATTGCATTTCAACACATGCCA...ACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TGCTTAGAATTTCCTGAGAACAGCCGAAGTTTCCTGATTCAAGCAGCATTTTGGTGCACAGGGCCTGGTTaGAAAGCAGACACACAACAC +
Preference number: 4 (lower is better)
Translates to: CLEFPENSRSFLIQAAFWCTGPG*KADTQH
Trigger: GTGTTGTGTGTCTGCTTTGCAACCAGGCCCTGTGCA...CCAAAATGCTGCTTGAATCAGGAAACTTCGGCTGTTCTCAGGAAATTCTAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652169.1
CDS-3UTR CCA 90 bp ATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTATTCAAGCAGCATTTTaGCAAACATGGGATTCAAAG +
Preference number: 4 (lower is better)
Translates to: MPAHAQSPPGSQQGCKCCIQAAF*QTWDSK
Trigger: CTTTGAATCCCATGTTTGCCAAAATGCTGCTTGAAT...ACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GCACTACACTCTGAGAGGACGCTAAGCCTACCTGTGAAACACAAATCCTCTGCTTCTGGATCTGCATCATaGCAGCGATGCTTAGAATTT +
Preference number: 4 (lower is better)
Translates to: ALHSERTLSLPVKHKSSASGSAS*QRCLEF
Trigger: AAATTCTAAGCATCGCTGCCATGATGCAGATCCAGA...AGCAGAGGATTTGTGTTTCACAGGTAGGCTTAGCGTCCTCTCAGAGTGTAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GTGATGTTCCTGAGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGATCAGACATGCCCTTTaGTGGTTTCGGCAGAGATCC +
Preference number: 4 (lower is better)
Translates to: VMFLSYRSLGHPNCCEFLIRHAL*WFRQRS
Trigger: GGATCTCTGCCGAAACCACCAAAGGGCATGTCTGAT...CAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCTCAGGAACATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GTCAATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGGTTTGGTGCCAAAAGTaGCACATCCAAACTAATATC +
Preference number: 4 (lower is better)
Translates to: VNHQSLASLLAADKQGQGVWCQK*HIQTNI
Trigger: GATATTAGTTTGGATGTGCCACTTTTGGCACCAAAC...CCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TCTGTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTAATGACATACACGTTTaGTGCCAAAAGTGGCACATC +
Preference number: 4 (lower is better)
Translates to: SVHPTWCFGLQWLTFLLVNDIHV*CQKWHI
Trigger: GATGTGCCACTTTTGGCACCAAACGTGTATGTCATT...AACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR CAA 72 bp CAACACATGACCGACATGAAGTGGAACCTGAGGACATaGTCAATTCCTAGTGCTTTCAGCTGCAGGATGACA +
Preference number: 4 (lower is better)
Translates to: QHMTDMKWNLRT*SIPSAFSCRMT
Trigger: TGTCATCCTGCAGCTGAAAGCACTAGGAATTGACAATGTCCTCAGGTTCCACTTCATGTCGGTCATGTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652169.1
CDS-3UTR TCA 90 bp GTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCACAGTTTCGACAGTTaGTTTGATATAATCTGGAAC +
Preference number: 4 (lower is better)
Translates to: VHPTWCFGLQWLTFLLVSHSFDS*FDIIWN
Trigger: GTTCCAGATTATATCAAATCAACTGTCGAAACTGTG...GGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp CTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGAGACATGCGCATCTGGCATGTGTTaGAATGCAATCATCATCACA +
Preference number: 4 (lower is better)
Translates to: LWWFRQRSPMFRSFVETCASGMC*NAIIIT
Trigger: TGTGATGATGATTGCATTTCAACACATGCCAGATGC...GCATGTCTCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CACTTGAAACTTGACAAGAAGCTTTTTCAATTGTTCTCTTACAGTCGCAGCTCTGTCTCTTCATCCCAGTaGGAGCTAGTGCTCGAGCCT +
Preference number: 4 (lower is better)
Translates to: HLKLDKKLFQLFSYSRSSVSSSQ*ELVLEP
Trigger: AGGCTCGAGCACTAGCTCGCACTGGGATGAAGAGAC...AGAGCTGCGACTGTAAGAGAACAATTGAAAAAGCTTCTTGTCAAGTTTCAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TCTGTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTTTTTAGCAAGCCAATaGCAATGTCAGTGTACAAGG +
Preference number: 4 (lower is better)
Translates to: SVHPTWCFGLQWLTFLLVFLASQ*QCQCTR
Trigger: CCTTGTACACTGACATTGCCATTGGCTTGCTAAAAA...AACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGACAGA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCATTCAAGCAGCATTTTaGCAAACATGGGATTCAAAG +
Preference number: 4 (lower is better)
Translates to: VHPTWCFGLQWLTFLLVSIQAAF*QTWDSK
Trigger: CTTTGAATCCCATGTTTGCCAAAATGCTGCTTGAAT...GGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TCCAGTAGAATGAAACCTCGCTGCATTGGCGAAGAAGCCGGAGACAATGCACCTATTCAAGCAGCATTTTaGCAAACATGGGATTCAAAG +
Preference number: 4 (lower is better)
Translates to: SSRMKPRCIGEEAGDNAPIQAAF*QTWDSK
Trigger: CTTTGAATCCCATGTTTGCCAAAATGCTGCTTGAAT...AGGTGCATTGTCTCCGGCTTCTTCGCCAATGCAGCGAGGTTTCATTCTACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TCTGTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTGTTTGGTGCCAAAAGTaGCACATCCAAACTAATATC +
Preference number: 4 (lower is better)
Translates to: SVHPTWCFGLQWLTFLLVVWCQK*HIQTNI
Trigger: GATATTAGTTTGGATGTGCCACTTTTGGCACCAAAC...AACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
3UTR CAA 72 bp AGATCCCCAATGTTTCGTTCATTCGTAGAGACATGCTaGTTCACACCTGGCAGCAGACCTCATTGGTTAACA +
Preference number: 4 (lower is better)
Translates to: RSPMFRSFVETC*FTPGSRPHWLT
Trigger: TGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAATGAACGAAACATTGGGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TTCATTTGCTCAAAGGAAGGCAGTCCTGCATACATGGGGAGAACTCGGAGGTGTTTTCGACAGTTGATTTaGTATAATCTGGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: FICSKEGSPAYMGRTRRCFRQLI*YNLEQD
Trigger: GTCCTGTTCCAGATTATATCAAATCAACTGTCGAAA...ACACCTCCGAGTTCTCCCCATGTATGCAGGACTGCCTTCCTTTGAGCAAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp CTGCATCTGGCATGTGTTGAAATGCAATCATCATCACAGCAAAGCAGCCCTGGGCACAGTTTCGACAGTTaGTTTGATATAATCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LHLACVEMQSSSQQSSPGHSFDS*FDIIWN
Trigger: GTTCCAGATTATATCAAATCAACTGTCGAAACTGTG...CCCAGGGCTGCTTTGCTGTGATGATGATTGCATTTCAACACATGCCAGATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TATATTGAGCATAGTGAGGTGGTCGCCCTCCTCCACAGCAAATTTACGGTGCACCACAGTTTCGACAGTTaGTTTGATATAATCTGGAAC +
Preference number: 4 (lower is better)
Translates to: YIEHSEVVALLHSKFTVHHSFDS*FDIIWN
Trigger: GTTCCAGATTATATCAAATCAACTGTCGAAACTGTG...GTGCACCGTAAATTTGCTGTGGAGGAGGGCGACCACCTCACTATGCTCAATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp AGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGCTAAAGAGGAGGCTTTCTGACACTGCGTaGCACCCTTTCAAACACTTT +
Preference number: 4 (lower is better)
Translates to: SYRSLGHPNCCEFLLKRRLSDTA*HPFKHF
Trigger: AAAGTGTTTGAAAGGGTGTCACGCAGTGTCAGAAAG...CCTCCTCTTTAGCAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TGCTTAGAATTTCCTGAGAACAGCCGAAGTTTCCTGATTCAAGCAGCATTTTGGCTTTCAGCTGCAGGATaGCAGGTGCCAAATTACTAC +
Preference number: 4 (lower is better)
Translates to: CLEFPENSRSFLIQAAFWLSAAG*QVPNYY
Trigger: GTAGTAATTTGGCACCTGTCATCCTGCAGCTGAAAG...CCAAAATGCTGCTTGAATCAGGAAACTTCGGCTGTTCTCAGGAAATTCTAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp TCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTGGGCACTTGAAACTTaGCAAGAAGCTTTTTCAATT +
Preference number: 4 (lower is better)
Translates to: SDMPFGGFGRDPQCFVHSWALET*QEAFSI
Trigger: AATTGAAAAAGCTTCTTGTCAAGTTTCAAGTGCCCA...CGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp CTGTCCTGGGATTGTAGGCTCGGAGTTTCACAAAGCCACAGTCGATCACATACATGGGCACTTGAAACTTaGCAAGAAGCTTTTTCAATT +
Preference number: 4 (lower is better)
Translates to: LSWDCRLGVSQSHSRSHTWALET*QEAFSI
Trigger: AATTGAAAAAGCTTCTTGTCAAGTTTCAAGTGCCCA...TGTATGTGATCGACTGTGGCTTTGTGAAACTCCGAGCCTACAATCCCAGGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CACTTGAAACTTGACAAGAAGCTTTTTCAATTGTTCTCTTACAGTCGCAGCTCTGTTTGGGAGACCCTGTaGCCATCAGACATGCCCTTT +
Preference number: 4 (lower is better)
Translates to: HLKLDKKLFQLFSYSRSSVWETL*PSDMPF
Trigger: AAAGGGCATGTCTGATGGGCACAGGGTCTCCCAAAC...AGAGCTGCGACTGTAAGAGAACAATTGAAAAAGCTTCTTGTCAAGTTTCAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CTGCATCTGGCATGTGTTGAAATGCAATCATCATCACAGCAAAGCAGCCCTGGGTGGCATGTGTTGAAATaGAATCATCATCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: LHLACVEMQSSSQQSSPGWHVLK*NHHHSK
Trigger: TTTGCTGTGATGATGATTGCATTTCAACACATGCCA...CCCAGGGCTGCTTTGCTGTGATGATGATTGCATTTCAACACATGCCAGATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AAATCCCGGAATTTGTCTGCATCCAGAGTGGCTGAAGCTACAATCAATCGAAGAGACATACACGTTTGGTaGCAAAAGTGGCACATCCAA +
Preference number: 4 (lower is better)
Translates to: KSRNLSASRVAEATINRRDIHVW*QKWHIQ
Trigger: TTGGATGTGCCACTTTTGGCACCAAACGTGTATGTC...TCTTCGATTGATTGTAGCTTCAGCCACTCTGGATGCAGACAAATTCCGGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGATTTTTAGCAAGCCAATaGCAATGTCAGTGTACAAGG +
Preference number: 4 (lower is better)
Translates to: PTWCFGLQWLTFLLVSHRFLASQ*QCQCTR
Trigger: CCTTGTACACTGACATTGCCATTGGCTTGCTAAAAA...TCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp TTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGACATGTATCCCTTGCTaGATCACTGGTTTCATTTTG +
Preference number: 4 (lower is better)
Translates to: FVETCLFTPGSRPHWLTQTCIPC*ITGFIL
Trigger: CAAAATGAAACCAGTGATCCAGCAAGGGATACATGT...CTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAACATGTATCCCTTGCTaGATCACTGGTTTCATTTTG +
Preference number: 4 (lower is better)
Translates to: PTWCFGLQWLTFLLVSHRTCIPC*ITGFIL
Trigger: CAAAATGAAACCAGTGATCCAGCAAGGGATACATGT...TCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp GACCTTGGCCCTTTTGGCTTTCAGAGACAGGTGCGTTCCTTGTTGATAAAAGTGACATGTATCCCTTGCTaGATCACTGGTTTCATTTTG +
Preference number: 4 (lower is better)
Translates to: DLGPFGFQRQVRSLLIKVTCIPC*ITGFIL
Trigger: CAAAATGAAACCAGTGATCCAGCAAGGGATACATGT...CACTTTTATCAACAAGGAACGCACCTGTCTCTGAAAGCCAAAAGGGCCAAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp CGCAGCTCTGACAAGACCCTTGTAATTCAGGAAATGTTCCTGACACCATTTAGATTGTTGATAAAAGTGTaGAGCCAGCTCCAACAGCCA +
Preference number: 4 (lower is better)
Translates to: RSSDKTLVIQEMFLTPFRLLIKV*SQLQQP
Trigger: TGGCTGTTGGAGCTGGCTCCACACTTTTATCAACAA...TCTAAATGGTGTCAGGAACATTTCCTGAATTACAAGGGTCTTGTCAGAGCTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp CTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGAGACATGCTGGGCACTTGAAACTTaGCAAGAAGCTTTTTCAATT +
Preference number: 4 (lower is better)
Translates to: LWWFRQRSPMFRSFVETCWALET*QEAFSI
Trigger: AATTGAAAAAGCTTCTTGTCAAGTTTCAAGTGCCCA...GCATGTCTCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR TCA 90 bp GTGATGTTCCTGAGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGGCATCTGGCATGTGTTaGAATGCAATCATCATCACA +
Preference number: 4 (lower is better)
Translates to: VMFLSYRSLGHPNCCEFLASGMC*NAIIIT
Trigger: TGTGATGATGATTGCATTTCAACACATGCCAGATGC...CAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCTCAGGAACATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AAATCCCGGAATTTGTCTGCATCCAGAGTGGCTGAAGCTACAATCAATCGAAGAATTCAAAGGAAACTCTaGAATTCTCATGCCAAGCGG +
Preference number: 4 (lower is better)
Translates to: KSRNLSASRVAEATINRRIQRKL*NSHAKR
Trigger: CCGCTTGGCATGAGAATTGCAGAGTTTCCTTTGAAT...TCTTCGATTGATTGTAGCTTCAGCCACTCTGGATGCAGACAAATTCCGGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp TTCCTGAGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGCTAAAGATTCAAAGGAAACTCTaGAATTCTCATGCCAAGCGG +
Preference number: 4 (lower is better)
Translates to: FLSYRSLGHPNCCEFLLKIQRKL*NSHAKR
Trigger: CCGCTTGGCATGAGAATTGCAGAGTTTCCTTTGAAT...CTTTAGCAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCTCAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AGCCGAAGTTTCCTGATTCAAGCAGCATTTTGGCAAACATGGGATTCAAAGGAAAAGATATTCTGGATCTaGATCATGGCAGCGATGCTT +
Preference number: 4 (lower is better)
Translates to: SRSFLIQAAFWQTWDSKEKIFWI*IMAAML
Trigger: AAGCATCGCTGCCATGATGCAGATCCAGAATATCTT...TTCCTTTGAATCCCATGTTTGCCAAAATGCTGCTTGAATCAGGAAACTTCGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AGCCGAAGTTTCCTGATTCAAGCAGCATTTTGGCAAACATGGGATTCAAAGGAATGTTTTGGCCTTCAGTaGCTAACTTTCCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: SRSFLIQAAFWQTWDSKECFGLQ*LTFLLV
Trigger: AACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACA...TTCCTTTGAATCCCATGTTTGCCAAAATGCTGCTTGAATCAGGAAACTTCGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
3UTR CAA 72 bp CACACATGTATCCCTTGCTGGATCACTGGTTTCATTTaGATTAAAGAAATCCCGGAATTTGTCTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: HTCIPCWITGFI*IKEIPEFVCIQ
Trigger: CTGGATGCAGACAAATTCCGGGATTTCTTTAATCAAAATGAAACCAGTGATCCAGCAAGGGATACATGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp CACTTGAAACTTGACAAGAAGCTTTTTCAATTGTTCTCTTACAGTCGCAGCTCTCACACATGTATCCCTTaGTGGATCACTGGTTTCATT +
Preference number: 4 (lower is better)
Translates to: HLKLDKKLFQLFSYSRSSHTCIP*WITGFI
Trigger: AATGAAACCAGTGATCCAGCAAGGGATACATGTGTG...AGAGCTGCGACTGTAAGAGAACAATTGAAAAAGCTTCTTGTCAAGTTTCAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR GCA 90 bp AATGACATACACGTTTGGTGCCAAAAGTGGCACATCCAAACTAATATCAGTATACACACATGTATCCCTTaGTGGATCACTGGTTTCATT +
Preference number: 4 (lower is better)
Translates to: NDIHVWCQKWHIQTNISIHTCIP*WITGFI
Trigger: AATGAAACCAGTGATCCAGCAAGGGATACATGTGTG...TATACTGATATTAGTTTGGATGTGCCACTTTTGGCACCAAACGTGTATGTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CCA 90 bp AATGACATACACGTTTGGTGCCAAAAGTGGCACATCCAAACTAATATCAGTATAACATGTATCCCTTGCTaGATCACTGGTTTCATTTTG +
Preference number: 4 (lower is better)
Translates to: NDIHVWCQKWHIQTNISITCIPC*ITGFIL
Trigger: CAAAATGAAACCAGTGATCCAGCAAGGGATACATGT...TATACTGATATTAGTTTGGATGTGCCACTTTTGGCACCAAACGTGTATGTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp AGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCCAGAAGCCACTGGGTTaGGGAGACCCTGTGCCCATC +
Preference number: 5 (lower is better)
Translates to: SEPTPTLPAAAQKDACPCQKPLG*GDPVPI
Trigger: GATGGGCACAGGGTCTCCCAAACCCAGTGGCTTCTG...GCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp CTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCAGAAGCCACTGGGTTaGGGAGACCCTGTGCCCATC +
Preference number: 5 (lower is better)
Translates to: LPLCPLQHRRMPAHAQSPQKPLG*GDPVPI
Trigger: GATGGGCACAGGGTCTCCCAAACCCAGTGGCTTCTG...AGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp CCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCACACGGGTCCTGGACCTaGGCCCTTTTGGCTTTCAGA +
Preference number: 5 (lower is better)
Translates to: PLCPLQHRRMPAHAQSPPHGSWT*ALLAFR
Trigger: TCTGAAAGCCAAAAGGGCCAAGGTCCAGGACCCGTG...TGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GTTTCCCATAGAGCTGGGCCAGGACTGCATGCCTGCTGGAAGTGGCATGCTGGGGTTAGGCGACAGTCTTaGTCCAGACCTCCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: VSHRAGPGLHACWKWHAGVRRQS*SRPPRA
Trigger: TGCTCTGGGAGGTCTGGACAAAGACTGTCGCCTAAC...CCCAGCATGCCACTTCCAGCAGGCATGCAGTCCTGGCCCAGCTCTATGGGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GTTTCCCATAGAGCTGGGCCAGGACTGCATGCCTGCTGGAAGTGGCATGCTGGGTGGACCTTGGCCCTTTaGGCTTTCAGAGACAGGTGC +
Preference number: 5 (lower is better)
Translates to: VSHRAGPGLHACWKWHAGWTLAL*AFRDRC
Trigger: GCACCTGTCTCTGAAAGCCAAAAGGGCCAAGGTCCA...CCCAGCATGCCACTTCCAGCAGGCATGCAGTCCTGGCCCAGCTCTATGGGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp ACAGGCCGCAGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTGCCAGCACGGGTCCTGGACCTaGGCCCTTTTGGCTTTCAGA +
Preference number: 5 (lower is better)
Translates to: TGRSPLQSNQTFHRSWCQHGSWT*ALLAFR
Trigger: TCTGAAAGCCAAAAGGGCCAAGGTCCAGGACCCGTG...CTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCTGCGGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATTGGCAGCAGACCTCATaGGTTAACACAGCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: VSVLSEPTPTLPAAAQKDWQQTS*VNTAVA
Trigger: GGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCA...ATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp ACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTGGCAGCAGACCTCATaGGTTAACACAGCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: TPTLPAAAQKDACPCTKSWQQTS*VNTAVA
Trigger: GGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCA...GGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TGCTGGAAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCAGAAGCCACTGGGTTaGGGAGACCCTGTGCCCATC +
Preference number: 5 (lower is better)
Translates to: CWKWHAGLVSVLSEPTPTQKPLG*GDPVPI
Trigger: GATGGGCACAGGGTCTCCCAAACCCAGTGGCTTCTG...AGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTTCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp ACAGGCCGCAGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTGCCAGGTTAGGCGACAGTCTTaGTCCAGACCTCCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: TGRSPLQSNQTFHRSWCQVRRQS*SRPPRA
Trigger: TGCTCTGGGAGGTCTGGACAAAGACTGTCGCCTAAC...CTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCTGCGGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp AGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCTTCGTAGAGACATGCTaGTTCACACCTGGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: SEPTPTLPAAAQKDACPCFVETC*FTPGSR
Trigger: TCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAA...GCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCATCAGACATGCCCTTaGGTGGTTTCGGCAGAGATC +
Preference number: 5 (lower is better)
Translates to: SHSARCSTEGCLPMHKVLHQTCP*VVSAEI
Trigger: GATCTCTGCCGAAACCACCAAAGGGCATGTCTGATG...GAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS CCA 90 bp GATGACAAGCTGGCAGCACTCCTTAGGGAAGATCTCGGGCCACCGTaGGGGTCGCCTCCACATGGACAAGTTGCCTCAAATACAGACAAC +
Preference number: 5 (lower is better)
Translates to: DDKLAALLREDLGPP*GSPPHGQVASNTDN
Trigger: GTTGTCTGTATTTGAGGCAACTTGTCCATGTGGAGGCGACCCCCACGGTGGCCCGAGATCTTCCCTAAGGAGTGCTGCCAGCTTGTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493450.1
CDS-3UTR CAA 90 bp AGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCAAGAAATCCCGGAATTaGTCTGCATCCAGAGTGGCT +
Preference number: 5 (lower is better)
Translates to: SEPTPTLPAAAQKDACPCKKSRN*SASRVA
Trigger: AGCCACTCTGGATGCAGACAAATTCCGGGATTTCTT...GCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp CTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTGAGGTTTCTGCCACATaGGTGGCCACTATCACCTTT +
Preference number: 5 (lower is better)
Translates to: LPLCPLQHRRMPAHAQSPEVSAT*VATITF
Trigger: AAAGGTGATAGTGGCCACCAATGTGGCAGAAACCTC...AGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp CTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTTACGGTGCACTCGAATaGCGTGAGACTTCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: LPLCPLQHRRMPAHAQSPYGALE*RETSGL
Trigger: CAAACCAGAAGTCTCACGCAATTCGAGTGCACCGTA...AGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp CCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCACAGGTGCGTTCCTTGTaGATAAAAGTGTGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: PLCPLQHRRMPAHAQSPPQVRSL*IKVWSQ
Trigger: CTGGCTCCACACTTTTATCAACAAGGAACGCACCTG...TGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGGACCTTGGCCCTTTaGGCTTTCAGAGACAGGTGC +
Preference number: 5 (lower is better)
Translates to: ETLCPSDMPFGGFGRDPQWTLAL*AFRDRC
Trigger: GCACCTGTCTCTGAAAGCCAAAAGGGCCAAGGTCCA...TTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGCACGGGTCCTGGACCTaGGCCCTTTTGGCTTTCAGA +
Preference number: 5 (lower is better)
Translates to: GLQWLTFLLVSHRAGPGLHGSWT*ALLAFR
Trigger: TCTGAAAGCCAAAAGGGCCAAGGTCCAGGACCCGTG...CAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GGATCTGAGCTGATGAACTCTCCTGAGTGCTCAGCTAGCGTGGCACCAGGACCTTGGCAGCAGACCTCATaGGTTAACACAGCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: GSELMNSPECSASVAPGPWQQTS*VNTAVA
Trigger: GGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCA...AGGTCCTGGTGCCACGCTAGCTGAGCACTCAGGAGAGTTCATCAGCTCAGATCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS GCA 90 bp CCGTTGTCCCAGAGTTTTCAGCCAGACTTTGTCTCTCTTCAGAGATaGTTACACCTGGCCCCTCTGTACCGGGTCGCCAGAACTTCACCG +
Preference number: 5 (lower is better)
Translates to: PLSQSFQPDFVSLQR*LHLAPLYRVARTSP
Trigger: CGGTGAAGTTCTGGCGACCCGGTACAGAGGGGCCAGGTGTAAGCATCTCTGAAGAGAGACAAAGTCTGGCTGAAAACTCTGGGACAACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp CCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCGTTTTCAGCCAGACTTaGTCTCTCTTCAGAGATGCT +
Preference number: 5 (lower is better)
Translates to: PTLPAAAQKDACPCTKSSVFSQT*SLFRDA
Trigger: AGCATCTCTGAAGAGAGACAAAGTCTGGCTGAAAAC...GGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGGTTGTAAACAACCGTaGTCCCAGAGTTTTCAGCCA +
Preference number: 5 (lower is better)
Translates to: VSVLSEPTPTLPAAAQKDGCKQP*SQSFQP
Trigger: TGGCTGAAAACTCTGGGACAACGGTTGTTTACAACC...ATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GTTTCCCATAGAGCTGGGCCAGGACTGCATGCCTGCTGGAAGTGGCATGCTGGGAGACAGGTGCGTTCCTaGTTGATAAAAGTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: VSHRAGPGLHACWKWHAGRQVRS*LIKVWS
Trigger: GCTCCACACTTTTATCAACAAGGAACGCACCTGTCT...CCCAGCATGCCACTTCCAGCAGGCATGCAGTCCTGGCCCAGCTCTATGGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp CCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAAGACAGGTGCGTTCCTaGTTGATAAAAGTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: PLCPLQHRRMPAHAQSPPRQVRS*LIKVWS
Trigger: GCTCCACACTTTTATCAACAAGGAACGCACCTGTCT...TGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp AGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATTGGACCTTGGCCCTTTaGGCTTTCAGAGACAGGTGC +
Preference number: 5 (lower is better)
Translates to: STEGCLPMHKVLQDPSKDWTLAL*AFRDRC
Trigger: GCACCTGTCTCTGAAAGCCAAAAGGGCCAAGGTCCA...ATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGTTCGTAGAGACATGCTaGTTCACACCTGGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: LVSVLSEPTPTLPAAAQKFVETC*FTPGSR
Trigger: TCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAA...CTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATCAATCACCAATCCCTaGCAAGTCTCCTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: ETLCPSDMPFGGFGRDPQSITNP*QVSWLQ
Trigger: CTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGA...TTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp CAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGCATGCCTGTCCCCACGCGCTCTaGCAAGAACCCAAGCAAACA +
Preference number: 5 (lower is better)
Translates to: QWLTFLLVSHRAGPGLHACPHAL*QEPKQT
Trigger: TGTTTGCTTGGGTTCTTGCAAGAGCGCGTGGGGACA...GGCATGCAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GGCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAATGTCCCCACGCGCTCTaGCAAGAACCCAAGCAAACA +
Preference number: 5 (lower is better)
Translates to: GNKTSACWKNCPHALLQECPHAL*QEPKQT
Trigger: TGTTTGCTTGGGTTCTTGCAAGAGCGCGTGGGGACA...TTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp ACCATCGACTGTGCTGGAGGGGGCGACATGAAGTGGAACCTGAGGACATTGTCATGTCCCCACGCGCTCTaGCAAGAACCCAAGCAAACA +
Preference number: 5 (lower is better)
Translates to: TIDCAGGGDMKWNLRTLSCPHAL*QEPKQT
Trigger: TGTTTGCTTGGGTTCTTGCAAGAGCGCGTGGGGACA...TGACAATGTCCTCAGGTTCCACTTCATGTCGCCCCCTCCAGCACAGTCGATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484417.5
CDS-3UTR CAA 90 bp ACAGGCCGCAGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTGCCAGGGTTGTAAACAACCGTaGTCCCAGAGTTTTCAGCCA +
Preference number: 5 (lower is better)
Translates to: TGRSPLQSNQTFHRSWCQGCKQP*SQSFQP
Trigger: TGGCTGAAAACTCTGGGACAACGGTTGTTTACAACC...CTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCTGCGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TGGGAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCGGTTGTAAACAACCGTaGTCCCAGAGTTTTCAGCCA +
Preference number: 5 (lower is better)
Translates to: WETLCPSDMPFGGFGRDPGCKQP*SQSFQP
Trigger: TGGCTGAAAACTCTGGGACAACGGTTGTTTACAACC...GGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCGCTGCAGCACAGAAGAAGAAATCCCGGAATTaGTCTGCATCCAGAGTGGCT +
Preference number: 5 (lower is better)
Translates to: LVSVLSEPTPTLPAAAQKKKSRN*SASRVA
Trigger: AGCCACTCTGGATGCAGACAAATTCCGGGATTTCTT...CTTCTGTGCTGCAGCGGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TGGGAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCAAGAAATCCCGGAATTaGTCTGCATCCAGAGTGGCT +
Preference number: 5 (lower is better)
Translates to: WETLCPSDMPFGGFGRDPKKSRN*SASRVA
Trigger: AGCCACTCTGGATGCAGACAAATTCCGGGATTTCTT...GGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCTCACACATGTATCCCTaGCTGGATCACTGGTTTCAT +
Preference number: 5 (lower is better)
Translates to: SHSARCSTEGCLPMHKVLSHMYP*LDHWFH
Trigger: ATGAAACCAGTGATCCAGCAAGGGATACATGTGTGA...GAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp ACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCACACATGTATCCCTaGCTGGATCACTGGTTTCAT +
Preference number: 5 (lower is better)
Translates to: TPTLPAAAQKDACPCTKSSHMYP*LDHWFH
Trigger: ATGAAACCAGTGATCCAGCAAGGGATACATGTGTGA...GGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp CCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCTTCAAACACTTTCATTaGCTCAAAGGAAGGCAGTCC +
Preference number: 5 (lower is better)
Translates to: PTLPAAAQKDACPCTKSSFKHFH*LKGRQS
Trigger: GGACTGCCTTCCTTTGAGCAAATGAAAGTGTTTGAA...GGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAAGAGGTTTCTGCCACATaGGTGGCCACTATCACCTTT +
Preference number: 5 (lower is better)
Translates to: ETLCPSDMPFGGFGRDPQEVSAT*VATITF
Trigger: AAAGGTGATAGTGGCCACCAATGTGGCAGAAACCTC...TTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAGAGGTTTCTGCCACATaGGTGGCCACTATCACCTTT +
Preference number: 5 (lower is better)
Translates to: CTKSSRIPARMQMLWAAGEVSAT*VATITF
Trigger: AAAGGTGATAGTGGCCACCAATGTGGCAGAAACCTC...TCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAACAGGTGCGTTCCTTGTaGATAAAAGTGTGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: ETLCPSDMPFGGFGRDPQQVRSL*IKVWSQ
Trigger: CTGGCTCCACACTTTTATCAACAAGGAACGCACCTG...TTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTGGCAGCAGACCTCATaGGTTAACACAGCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: CAHQTCPLVVSAEIPNVSWQQTS*VNTAVA
Trigger: GGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCA...CGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTCATCAGACATGCCCTTaGGTGGTTTCGGCAGAGATC +
Preference number: 5 (lower is better)
Translates to: GCLPMHKVLQDPSKDANAHQTCP*VVSAEI
Trigger: GATCTCTGCCGAAACCACCAAAGGGCATGTCTGATG...AGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GCGAAGAAGCCGGAGACAATGCACCTCAGAACCAGATCCGGGTCACCTTCACTATCAATCACCAATCCCTaGCAAGTCTCCTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: AKKPETMHLRTRSGSPSLSITNP*QVSWLQ
Trigger: CTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGA...TAGTGAAGGTGACCCGGATCTGGTTCTGAGGTGCATTGTCTCCGGCTTCTTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS GCA 90 bp AATGATCTGTTTCTTGGGGGAAGTGCTTCAAGTGCTGTGACGGAATaGCTCGTCGGCATTGTAATAAAGCCAGCGTCCTGGGGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: NDLFLGGSASSAVTE*LVGIVIKPASWGPG
Trigger: CCCAGGACCCCAGGACGCTGGCTTTATTACAATGCCGACGAGGCATTCCGTCACAGCACTTGAAGCACTTCCCCCAAGAAACAGATCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493450.1
CDS CCA 90 bp CTTTGGGAAGAAAGATCATGTGTAACAGCAGCCACTCTTCGAGGCTaGGTCACTCCTACCACTCTTCCTTCAGCTGTCCAGCCGGCTTCT +
Preference number: 5 (lower is better)
Translates to: LWEERSCVTAATLRG*VTPTTLPSAVQPAS
Trigger: AGAAGCCGGCTGGACAGCTGAAGGAAGAGTGGTAGGAGTGACCCAGCCTCGAAGAGTGGCTGCTGTTACACATGATCTTTCTTCCCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TGGGAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCGTTTTCAGCCAGACTTaGTCTCTCTTCAGAGATGCT +
Preference number: 5 (lower is better)
Translates to: WETLCPSDMPFGGFGRDPVFSQT*SLFRDA
Trigger: AGCATCTCTGAAGAGAGACAAAGTCTGGCTGAAAAC...GGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGAAGGTTGTAAACAACCGTaGTCCCAGAGTTTTCAGCCA +
Preference number: 5 (lower is better)
Translates to: AQSPPGSQQGCKCCGQREGCKQP*SQSFQP
Trigger: TGGCTGAAAACTCTGGGACAACGGTTGTTTACAACC...TTCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp ACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTTCAAACACTTTCATTaGCTCAAAGGAAGGCAGTCC +
Preference number: 5 (lower is better)
Translates to: TPTLPAAAQKDACPCTKSFKHFH*LKGRQS
Trigger: GGACTGCCTTCCTTTGAGCAAATGAAAGTGTTTGAA...GGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp CAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACCGAGGTTTCTGCCACATaGGTGGCCACTATCACCTTT +
Preference number: 5 (lower is better)
Translates to: QQNQCLLEELSPRALARTEVSAT*VATITF
Trigger: AAAGGTGATAGTGGCCACCAATGTGGCAGAAACCTC...GGTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp ACAGGCCGCAGCCCACTTCAGAGCAACCAAACATTCCACAGGAGCTGGTGCCAGTGGAACCTGAGGACATaGTCAATTCCTAGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: TGRSPLQSNQTFHRSWCQWNLRT*SIPSAF
Trigger: GAAAGCACTAGGAATTGACAATGTCCTCAGGTTCCA...CTGGCACCAGCTCCTGTGGAATGTTTGGTTGCTCTGAAGTGGGCTGCGGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp CCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCAGTTAGGCGACAGTCTTaGTCCAGACCTCCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: PPHMVFWPSVANFPPCFPVRRQS*SRPPRA
Trigger: TGCTCTGGGAGGTCTGGACAAAGACTGTCGCCTAAC...TGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GTCAATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGGTTAGGCGACAGTCTTaGTCCAGACCTCCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: VNHQSLASLLAADKQGQGVRRQS*SRPPRA
Trigger: TGCTCTGGGAGGTCTGGACAAAGACTGTCGCCTAAC...CCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTTACGGTGCACTCGAATaGCGTGAGACTTCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: GCLPMHKVLQDPSKDANAYGALE*RETSGL
Trigger: CAAACCAGAAGTCTCACGCAATTCGAGTGCACCGTA...AGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTACGGTGCACTCGAATaGCGTGAGACTTCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: DACPCTKSSRIPARMQMLYGALE*RETSGL
Trigger: CAAACCAGAAGTCTCACGCAATTCGAGTGCACCGTA...CAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp AGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATTACGGTGCACTCGAATaGCGTGAGACTTCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: STEGCLPMHKVLQDPSKDYGALE*RETSGL
Trigger: CAAACCAGAAGTCTCACGCAATTCGAGTGCACCGTA...ATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp CAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGCATGCCCAGGTGCGTTCCTTGTaGATAAAAGTGTGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: QWLTFLLVSHRAGPGLHAQVRSL*IKVWSQ
Trigger: CTGGCTCCACACTTTTATCAACAAGGAACGCACCTG...GGCATGCAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp CACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAGACAGGTGCGTTCCTaGTTGATAAAAGTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: HRRMPAHAQSPPGSQQGCRQVRS*LIKVWS
Trigger: GCTCCACACTTTTATCAACAAGGAACGCACCTGTCT...GCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCTGGACCTTGGCCCTTTaGGCTTTCAGAGACAGGTGC +
Preference number: 5 (lower is better)
Translates to: VHPTWCFGLQWLTFLLVSWTLAL*AFRDRC
Trigger: GCACCTGTCTCTGAAAGCCAAAAGGGCCAAGGTCCA...GGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TCTGTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTCACGGGTCCTGGACCTaGGCCCTTTTGGCTTTCAGA +
Preference number: 5 (lower is better)
Translates to: SVHPTWCFGLQWLTFLLVHGSWT*ALLAFR
Trigger: TCTGAAAGCCAAAAGGGCCAAGGTCCAGGACCCGTG...AACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp ACTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTGCATCTGGCATGTGTaGAAATGCAATCATCATCAC +
Preference number: 5 (lower is better)
Translates to: TPTLPAAAQKDACPCTKSCIWHV*KCNHHH
Trigger: GTGATGATGATTGCATTTCAACACATGCCAGATGCA...GGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp AGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAAGCTTCTGCAAGGTACTaGAATACCGGCAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: RRMPAHAQSPPGSQQGCKASARY*NTGSFC
Trigger: GCAGAAGCTGCCGGTATTCAAGTACCTTGCAGAAGC...TTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373323.8
CDS-3UTR CAA 90 bp GGCTTCCTCTGTATAAAGGCGATAACATTTTCCCGAGCGACTACGACCACCACGCTGCACAGGGCCTGGTaGCAAAGCAGACACACAACA +
Preference number: 5 (lower is better)
Translates to: GFLCIKAITFSRATTTTTLHRAW*QSRHTT
Trigger: TGTTGTGTGTCTGCTTTGCAACCAGGCCCTGTGCAG...CGTGGTGGTCGTAGTCGCTCGGGAAAATGTTATCGCCTTTATACAGAGGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652169.1
CDS-3UTR CAA 90 bp TCTGAGCTGATGAACTCTCCTGAGTGCTCAGCTAGCGTGGCACCAGGACCTGGCTTCAAACACTTTCATTaGCTCAAAGGAAGGCAGTCC +
Preference number: 5 (lower is better)
Translates to: SELMNSPECSASVAPGPGFKHFH*LKGRQS
Trigger: GGACTGCCTTCCTTTGAGCAAATGAAAGTGTTTGAA...GCCAGGTCCTGGTGCCACGCTAGCTGAGCACTCAGGAGAGTTCATCAGCTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TGGGAGACCCTGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCTTCAAACACTTTCATTaGCTCAAAGGAAGGCAGTCC +
Preference number: 5 (lower is better)
Translates to: WETLCPSDMPFGGFGRDPFKHFH*LKGRQS
Trigger: GGACTGCCTTCCTTTGAGCAAATGAAAGTGTTTGAA...GGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACAGGGTCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGTGGGCAGCGGGATGGAACCTGAGGACATaGTCAATTCCTAGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: CTKSSRIPARMQMLWAAGWNLRT*SIPSAF
Trigger: GAAAGCACTAGGAATTGACAATGTCCTCAGGTTCCA...TCCCGCTGCCCACAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TCTGTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTGTTAGGCGACAGTCTTaGTCCAGACCTCCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: SVHPTWCFGLQWLTFLLVVRRQS*SRPPRA
Trigger: TGCTCTGGGAGGTCTGGACAAAGACTGTCGCCTAAC...AACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCAAGAAGCTTTTTCAATaGTTCTCTTACAGTCGCAGC +
Preference number: 5 (lower is better)
Translates to: SHSARCSTEGCLPMHKVLKKLFQ*FSYSRS
Trigger: GCTGCGACTGTAAGAGAACAATTGAAAAAGCTTCTT...GAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp CTCCCACTCTGCCCGCTGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTAAGAAGCTTTTTCAATaGTTCTCTTACAGTCGCAGC +
Preference number: 5 (lower is better)
Translates to: LPLCPLQHRRMPAHAQSPKKLFQ*FSYSRS
Trigger: GCTGCGACTGTAAGAGAACAATTGAAAAAGCTTCTT...AGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCAGCGGGCAGAGTGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TCTGTCCACCCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTGGACCTTGGCCCTTTaGGCTTTCAGAGACAGGTGC +
Preference number: 5 (lower is better)
Translates to: SVHPTWCFGLQWLTFLLVWTLAL*AFRDRC
Trigger: GCACCTGTCTCTGAAAGCCAAAAGGGCCAAGGTCCA...AACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGGGTGGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GGCTTCCTCTGTATAAAGGCGATAACATTTTCCCGAGCGACTACGACCACCACGTCAATCACCAATCCCTaGCAAGTCTCCTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: GFLCIKAITFSRATTTTTSITNP*QVSWLQ
Trigger: CTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGA...CGTGGTGGTCGTAGTCGCTCGGGAAAATGTTATCGCCTTTATACAGAGGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp AGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGTTTTCAGCCAGACTTaGTCTCTCTTCAGAGATGCT +
Preference number: 5 (lower is better)
Translates to: STEGCLPMHKVLQDPSKDVFSQT*SLFRDA
Trigger: AGCATCTCTGAAGAGAGACAAAGTCTGGCTGAAAAC...ATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGCTGTGGCCCCAGCAGGTTTTCAGCCAGACTTaGTCTCTCTTCAGAGATGCT +
Preference number: 5 (lower is better)
Translates to: LFTPGSRPHWLTQLWPQQVFSQT*SLFRDA
Trigger: AGCATCTCTGAAGAGAGACAAAGTCTGGCTGAAAAC...CTGCTGGGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGCTGTGGCCCCAGCAGTGGAACCTGAGGACATaGTCAATTCCTAGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: LFTPGSRPHWLTQLWPQQWNLRT*SIPSAF
Trigger: GAAAGCACTAGGAATTGACAATGTCCTCAGGTTCCA...CTGCTGGGGCCACAGCTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GCAACAAAACCAGTGCCTGCTGGAAGAACTGTCCCCACGCGCTCTTGCAAGAACTGGAACCTGAGGACATaGTCAATTCCTAGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: ATKPVPAGRTVPTRSCKNWNLRT*SIPSAF
Trigger: GAAAGCACTAGGAATTGACAATGTCCTCAGGTTCCA...GTTCTTGCAAGAGCGCGTGGGGACAGTTCTTCCAGCAGGCACTGGTTTTGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp AAGTGGCATGCTGGGTTAGTGAGCGTGCTGAGTGAGCCAACTCCCACTCTGCCCAATGCTTCATATATATaGAGCATAGTGAGGTGGTCG +
Preference number: 5 (lower is better)
Translates to: KWHAGLVSVLSEPTPTLPNASYI*SIVRWS
Trigger: CGACCACCTCACTATGCTCAATATATATGAAGCATT...GGGCAGAGTGGGAGTTGGCTCACTCAGCACGCTCACTAACCCAGCATGCCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GTCAATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGCAGGTGCGTTCCTTGTaGATAAAAGTGTGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: VNHQSLASLLAADKQGQGQVRSL*IKVWSQ
Trigger: CTGGCTCCACACTTTTATCAACAAGGAACGCACCTG...CCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp AGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAAAGACAGGTGCGTTCCTaGTTGATAAAAGTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: RRMPAHAQSPPGSQQGCKRQVRS*LIKVWS
Trigger: GCTCCACACTTTTATCAACAAGGAACGCACCTGTCT...TTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp CTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGAGACATGCTGTCCCCACGCGCTCTaGCAAGAACCCAAGCAAACA +
Preference number: 5 (lower is better)
Translates to: LWWFRQRSPMFRSFVETCCPHAL*QEPKQT
Trigger: TGTTTGCTTGGGTTCTTGCAAGAGCGCGTGGGGACA...GCATGTCTCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp CACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCTGCATCTGGCATGTGTaGAAATGCAATCATCATCAC +
Preference number: 5 (lower is better)
Translates to: HRRMPAHAQSPPGSQQGCCIWHV*KCNHHH
Trigger: GTGATGATGATTGCATTTCAACACATGCCAGATGCA...GCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GGACTGACGCAGGGTGTATGTGCAGCTCATGGTCATCACGGATGGTCCTATAAGGTTTTCAGCCAGACTTaGTCTCTCTTCAGAGATGCT +
Preference number: 5 (lower is better)
Translates to: GLTQGVCAAHGHHGWSYKVFSQT*SLFRDA
Trigger: AGCATCTCTGAAGAGAGACAAAGTCTGGCTGAAAAC...CTTATAGGACCATCCGTGATGACCATGAGCTGCACATACACCCTGCGTCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TGCAGCACAGAAGGATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGAATGCTTCATATATATaGAGCATAGTGAGGTGGTCG +
Preference number: 5 (lower is better)
Translates to: CSTEGCLPMHKVLQDPSKNASYI*SIVRWS
Trigger: CGACCACCTCACTATGCTCAATATATATGAAGCATT...CTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATCCTTCTGTGCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGTTCATTCGTAGAGACCAGGTGCGTTCCTTGTaGATAAAAGTGTGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: CPLVVSAEIPNVSFIRRDQVRSL*IKVWSQ
Trigger: CTGGCTCCACACTTTTATCAACAAGGAACGCACCTG...GTCTCTACGAATGAACGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp CGCAGCTCTGACAAGACCCTTGTAATTCAGGAAATGTTCCTGACACCATTTAGACACGGGTCCTGGACCTaGGCCCTTTTGGCTTTCAGA +
Preference number: 5 (lower is better)
Translates to: RSSDKTLVIQEMFLTPFRHGSWT*ALLAFR
Trigger: TCTGAAAGCCAAAAGGGCCAAGGTCCAGGACCCGTG...TCTAAATGGTGTCAGGAACATTTCCTGAATTACAAGGGTCTTGTCAGAGCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGCATCAGACATGCCCTTaGGTGGTTTCGGCAGAGATC +
Preference number: 5 (lower is better)
Translates to: FVETCLFTPGSRPHWLTQHQTCP*VVSAEI
Trigger: GATCTCTGCCGAAACCACCAAAGGGCATGTCTGATG...CTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp CCCACATGGTGTTTTGGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGAGGTTTCTGCCACATaGGTGGCCACTATCACCTTT +
Preference number: 5 (lower is better)
Translates to: PTWCFGLQWLTFLLVSHREVSAT*VATITF
Trigger: AAAGGTGATAGTGGCCACCAATGTGGCAGAAACCTC...TCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCCAAAACACCATGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GGCCTTCAGTGGCTAACTTTCCTCCTTGTTTCCCATAGAGCTGGGCCAGGACTGAATGCTTCATATATATaGAGCATAGTGAGGTGGTCG +
Preference number: 5 (lower is better)
Translates to: GLQWLTFLLVSHRAGPGLNASYI*SIVRWS
Trigger: CGACCACCTCACTATGCTCAATATATATGAAGCATT...CAGTCCTGGCCCAGCTCTATGGGAAACAAGGAGGAAAGTTAGCCACTGAAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GATGCCTGCCCATGCACAAAGTCCTCCAGGATCCCAGCAAGGATGCAAATGCTGAAGAAGCTTTTTCAATaGTTCTCTTACAGTCGCAGC +
Preference number: 5 (lower is better)
Translates to: DACPCTKSSRIPARMQMLKKLFQ*FSYSRS
Trigger: GCTGCGACTGTAAGAGAACAATTGAAAAAGCTTCTT...CAGCATTTGCATCCTTGCTGGGATCCTGGAGGACTTTGTGCATGGGCAGGCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GCGAAGAAGCCGGAGACAATGCACCTCAGAACCAGATCCGGGTCACCTTCACTAAAGAAGCTTTTTCAATaGTTCTCTTACAGTCGCAGC +
Preference number: 5 (lower is better)
Translates to: AKKPETMHLRTRSGSPSLKKLFQ*FSYSRS
Trigger: GCTGCGACTGTAAGAGAACAATTGAAAAAGCTTCTT...TAGTGAAGGTGACCCGGATCTGGTTCTGAGGTGCATTGTCTCCGGCTTCTTCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp AAAAGTGTGGAGCCAGCTCCAACAGCCAGGCCGATTCAATGGCAGTCACATCTCTGCATCTGGCATGTGTaGAAATGCAATCATCATCAC +
Preference number: 5 (lower is better)
Translates to: KSVEPAPTARPIQWQSHLCIWHV*KCNHHH
Trigger: GTGATGATGATTGCATTTCAACACATGCCAGATGCA...GAGATGTGACTGCCATTGAATCGGCCTGGCTGTTGGAGCTGGCTCCACACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS GCA 90 bp TTCGTTATAGATGACCCTATAAGCTCCAGTAGAATGAAACCTCGCTaGATTGGCGAAGAAGCCGGAGACAATGCACCTCAGAACCAGATC +
Preference number: 5 (lower is better)
Translates to: FVIDDPISSSRMKPR*IGEEAGDNAPQNQI
Trigger: GATCTGGTTCTGAGGTGCATTGTCTCCGGCTTCTTCGCCAATGCAGCGAGGTTTCATTCTACTGGAGCTTATAGGGTCATCTATAACGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373325.6
CDS-3UTR CAA 90 bp TGTGCCCATCAGACATGCCCTTTGGTGGTTTCGGCAGAGATCCCCAATGTTTCGAATGCTTCATATATATaGAGCATAGTGAGGTGGTCG +
Preference number: 5 (lower is better)
Translates to: CAHQTCPLVVSAEIPNVSNASYI*SIVRWS
Trigger: CGACCACCTCACTATGCTCAATATATATGAAGCATT...CGAAACATTGGGGATCTCTGCCGAAACCACCAAAGGGCATGTCTGATGGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GTGATGTTCCTGAGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGTCAATCACCAATCCCTaGCAAGTCTCCTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: VMFLSYRSLGHPNCCEFLSITNP*QVSWLQ
Trigger: CTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGA...CAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCTCAGGAACATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TTCGTAGAGACATGCTTGTTCACACCTGGCAGCAGACCTCATTGGTTAACACAGTCACACATGTATCCCTaGCTGGATCACTGGTTTCAT +
Preference number: 5 (lower is better)
Translates to: FVETCLFTPGSRPHWLTQSHMYP*LDHWFH
Trigger: ATGAAACCAGTGATCCAGCAAGGGATACATGTGTGA...CTGTGTTAACCAATGAGGTCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp AGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGCTAAAGAGGAGGTACGGTGCACTCGAATaGCGTGAGACTTCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: SYRSLGHPNCCEFLLKRRYGALE*RETSGL
Trigger: CAAACCAGAAGTCTCACGCAATTCGAGTGCACCGTA...CCTCCTCTTTAGCAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TCCAGTAGAATGAAACCTCGCTGCATTGGCGAAGAAGCCGGAGACAATGCACCTAATGCTTCATATATATaGAGCATAGTGAGGTGGTCG +
Preference number: 5 (lower is better)
Translates to: SSRMKPRCIGEEAGDNAPNASYI*SIVRWS
Trigger: CGACCACCTCACTATGCTCAATATATATGAAGCATT...AGGTGCATTGTCTCCGGCTTCTTCGCCAATGCAGCGAGGTTTCATTCTACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp TCAATCACCAATCCCTTGCAAGTCTCCTGGCTGCAGATAAACAGGGACAAGGGCAAGAAGCTTTTTCAATaGTTCTCTTACAGTCGCAGC +
Preference number: 5 (lower is better)
Translates to: SITNPLQVSWLQINRDKGKKLFQ*FSYSRS
Trigger: GCTGCGACTGTAAGAGAACAATTGAAAAAGCTTCTT...GCCCTTGTCCCTGTTTATCTGCAGCCAGGAGACTTGCAAGGGATTGGTGATTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GTGATGTTCCTGAGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGTTCGTAGAGACATGCTaGTTCACACCTGGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: VMFLSYRSLGHPNCCEFLFVETC*FTPGSR
Trigger: TCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAA...CAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCTCAGGAACATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp CCACAAAGATATTCTGGATCTGCATCATGGCAGCGATGCTTAGAATTTCCTGAGTTCGTAGAGACATGCTaGTTCACACCTGGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: PQRYSGSASWQRCLEFPEFVETC*FTPGSR
Trigger: TCTGCTGCCAGGTGTGAACAAGCATGTCTCTACGAA...CTCAGGAAATTCTAAGCATCGCTGCCATGATGCAGATCCAGAATATCTTTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp CTGCATCTGGCATGTGTTGAAATGCAATCATCATCACAGCAAAGCAGCCCTGGGTGCATCTGGCATGTGTaGAAATGCAATCATCATCAC +
Preference number: 5 (lower is better)
Translates to: LHLACVEMQSSSQQSSPGCIWHV*KCNHHH
Trigger: GTGATGATGATTGCATTTCAACACATGCCAGATGCA...CCCAGGGCTGCTTTGCTGTGATGATGATTGCATTTCAACACATGCCAGATGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp GTGATGTTCCTGAGCTACAGAAGTTTAGGGCATCCAAACTGTTGTGAATTCCTGAAGAAATCCCGGAATTaGTCTGCATCCAGAGTGGCT +
Preference number: 5 (lower is better)
Translates to: VMFLSYRSLGHPNCCEFLKKSRN*SASRVA
Trigger: AGCCACTCTGGATGCAGACAAATTCCGGGATTTCTT...CAGGAATTCACAACAGTTTGGATGCCCTAAACTTCTGTAGCTCAGGAACATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp AAATCCCGGAATTTGTCTGCATCCAGAGTGGCTGAAGCTACAATCAATCGAAGAAGACAGGTGCGTTCCTaGTTGATAAAAGTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: KSRNLSASRVAEATINRRRQVRS*LIKVWS
Trigger: GCTCCACACTTTTATCAACAAGGAACGCACCTGTCT...TCTTCGATTGATTGTAGCTTCAGCCACTCTGGATGCAGACAAATTCCGGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS CCA 90 bp AGAGGACTGACGCAGGGTGTATGTGCAGCTCATGGTCATCACGGATaGTCCTTGGAACATAGAAGAATTTTGTCTGAAGCACATTTTAAA +
Preference number: 5 (lower is better)
Translates to: RGLTQGVCAAHGHHG*SLEHRRILSEAHFK
Trigger: TTTAAAATGTGCTTCAGACAAAATTCTTCTATGTTCCAAGGACCATCCGTGATGACCATGAGCTGCACATACACCCTGCGTCAGTCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482619.1
ENST00000493450.1
CDS-3UTR CAA 90 bp AATGACATACACGTTTGGTGCCAAAAGTGGCACATCCAAACTAATATCAGTATAGGTTGTAAACAACCGTaGTCCCAGAGTTTTCAGCCA +
Preference number: 5 (lower is better)
Translates to: NDIHVWCQKWHIQTNISIGCKQP*SQSFQP
Trigger: TGGCTGAAAACTCTGGGACAACGGTTGTTTACAACC...TATACTGATATTAGTTTGGATGTGCCACTTTTGGCACCAAACGTGTATGTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp AATGACATACACGTTTGGTGCCAAAAGTGGCACATCCAAACTAATATCAGTATAAAGAAATCCCGGAATTaGTCTGCATCCAGAGTGGCT +
Preference number: 5 (lower is better)
Translates to: NDIHVWCQKWHIQTNISIKKSRN*SASRVA
Trigger: AGCCACTCTGGATGCAGACAAATTCCGGGATTTCTT...TATACTGATATTAGTTTGGATGTGCCACTTTTGGCACCAAACGTGTATGTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp CACTTGAAACTTGACAAGAAGCTTTTTCAATTGTTCTCTTACAGTCGCAGCTCTTCACACATGTATCCCTaGCTGGATCACTGGTTTCAT +
Preference number: 5 (lower is better)
Translates to: HLKLDKKLFQLFSYSRSSSHMYP*LDHWFH
Trigger: ATGAAACCAGTGATCCAGCAAGGGATACATGTGTGA...AGAGCTGCGACTGTAAGAGAACAATTGAAAAAGCTTCTTGTCAAGTTTCAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp AATGACATACACGTTTGGTGCCAAAAGTGGCACATCCAAACTAATATCAGTATATCACACATGTATCCCTaGCTGGATCACTGGTTTCAT +
Preference number: 5 (lower is better)
Translates to: NDIHVWCQKWHIQTNISISHMYP*LDHWFH
Trigger: ATGAAACCAGTGATCCAGCAAGGGATACATGTGTGA...TATACTGATATTAGTTTGGATGTGCCACTTTTGGCACCAAACGTGTATGTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS-3UTR CAA 90 bp AATGACATACACGTTTGGTGCCAAAAGTGGCACATCCAAACTAATATCAGTATATTCAAACACTTTCATTaGCTCAAAGGAAGGCAGTCC +
Preference number: 5 (lower is better)
Translates to: NDIHVWCQKWHIQTNISIFKHFH*LKGRQS
Trigger: GGACTGCCTTCCTTTGAGCAAATGAAAGTGTTTGAA...TATACTGATATTAGTTTGGATGTGCCACTTTTGGCACCAAACGTGTATGTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252011.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS CCA 72 bp GAATGCCTCGTCGGCATTGTAATAAAGCCAGCGTCCTaGGGTCCTGGGCTGTCCTACCAGGGGGTGGTGAGC +
Preference number: 6 (lower is better)
Translates to: ECLVGIVIKPAS*GPGLSYQGVVS
Trigger: GCTCACCACCCCCTGGTAGGACAGCCCAGGACCCCAGGACGCTGGCTTTATTACAATGCCGACGAGGCATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493450.1
CDS CCA 72 bp CTGGCAGCACTCCTTAGGGAAGATCTCGGGCCACCGTaGGGGTCGCCTCCACATGGACAAGTTGCCTCAAAT +
Preference number: 6 (lower is better)
Translates to: LAALLREDLGPP*GSPPHGQVASN
Trigger: ATTTGAGGCAACTTGTCCATGTGGAGGCGACCCCCACGGTGGCCCGAGATCTTCCCTAAGGAGTGCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493450.1
CDS GCA 72 bp AAAGCGGATGCAGTAGCCCACCTCGTGGCCCAGCACTaGACCCCTTTCTTCAGCTACTCTCCCTGCAACCTT +
Preference number: 6 (lower is better)
Translates to: KADAVAHLVAQH*TPFFSYSPCNL
Trigger: AAGGTTGCAGGGAGAGTAGCTGAAGAAAGGGGTGCAGTGCTGGGCCACGAGGTGGGCTACTGCATCCGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS CCA 72 bp CTCCCTGCAACTGTAACAGCAGCCACTCTTCGAGGCTaGGTCACTCCTACCACTCTTCCTTCAGCTGTCCAG +
Preference number: 6 (lower is better)
Translates to: LPATVTAATLRG*VTPTTLPSAVQ
Trigger: CTGGACAGCTGAAGGAAGAGTGGTAGGAGTGACCCAGCCTCGAAGAGTGGCTGCTGTTACAGTTGCAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
CDS CCA 72 bp CTCTCCAGGAGAGTAGGAGCAATCAAGATGACAAGCTaGCAGCACTCCTTAGGGAAGATCTCGGGCCACCGT +
Preference number: 6 (lower is better)
Translates to: LSRRVGAIKMTS*QHSLGKISGHR
Trigger: ACGGTGGCCCGAGATCTTCCCTAAGGAGTGCTGCCAGCTTGTCATCTTGATTGCTCCTACTCTCCTGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493450.1
CDS GCA 72 bp CAGAGTTTTCAGCCAGACTTTGTCTCTCTTCAGAGATaGTTACACCTGGCCCCTCTGTACCGGGTCGCCAGA +
Preference number: 6 (lower is better)
Translates to: QSFQPDFVSLQR*LHLAPLYRVAR
Trigger: TCTGGCGACCCGGTACAGAGGGGCCAGGTGTAAGCATCTCTGAAGAGAGACAAAGTCTGGCTGAAAACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS GCA 72 bp TTTCTTGGGGGAAGTGCTTCAAGTGCTGTGACGGAATaGCTCGTCGGCATTGTAATAAAGCCAGCGTCCTGG +
Preference number: 6 (lower is better)
Translates to: FLGGSASSAVTE*LVGIVIKPASW
Trigger: CCAGGACGCTGGCTTTATTACAATGCCGACGAGGCATTCCGTCACAGCACTTGAAGCACTTCCCCCAAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493450.1
CDS GCA 72 bp GATGACCCTATAAGCTCCAGTAGAATGAAACCTCGCTaGATTGGCGAAGAAGCCGGAGACAATGCACCTCAG +
Preference number: 6 (lower is better)
Translates to: DDPISSSRMKPR*IGEEAGDNAPQ
Trigger: CTGAGGTGCATTGTCTCCGGCTTCTTCGCCAATGCAGCGAGGTTTCATTCTACTGGAGCTTATAGGGTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373325.6
CDS CAA 90 bp ATAAGGGTTGTAAACAACCGTTGTCCCAGAGTTTTCAGCCAGACTTaGTCTCTCTTCAGAGATGCTTACACCTGGCCCCTCTGTACCGGG +
Preference number: 6 (lower is better)
Translates to: IRVVNNRCPRVFSQT*SLFRDAYTWPLCTG
Trigger: CCCGGTACAGAGGGGCCAGGTGTAAGCATCTCTGAAGAGAGACAAAGTCTGGCTGAAAACTCTGGGACAACGGTTGTTTACAACCCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS CAA 72 bp GTAAACAACCGTTGTCCCAGAGTTTTCAGCCAGACTTaGTCTCTCTTCAGAGATGCTTACACCTGGCCCCTC +
Preference number: 6 (lower is better)
Translates to: VNNRCPRVFSQT*SLFRDAYTWPL
Trigger: GAGGGGCCAGGTGTAAGCATCTCTGAAGAGAGACAAAGTCTGGCTGAAAACTCTGGGACAACGGTTGTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS CAA 72 bp CTGCACCCCTTTCTTCAGCTACTCTCCCTGCAACCTTaGGGAAGAAAGATCATGTGTAACAGCAGCCACTCT +
Preference number: 6 (lower is better)
Translates to: LHPFLQLLSLQP*GRKIMCNSSHS
Trigger: AGAGTGGCTGCTGTTACACATGATCTTTCTTCCCAAAGGTTGCAGGGAGAGTAGCTGAAGAAAGGGGTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484417.5
ENST00000652169.1
CDS CAA 90 bp TCTGCTGCTCTATGGAAAGGGCAGCATAAGGGTTGTAAACAACCGTaGTCCCAGAGTTTTCAGCCAGACTTTGTCTCTCTTCAGAGATGC +
Preference number: 6 (lower is better)
Translates to: SAALWKGQHKGCKQP*SQSFQPDFVSLQRC
Trigger: GCATCTCTGAAGAGAGACAAAGTCTGGCTGAAAACTCTGGGACAACGGTTGTTTACAACCCTTATGCTGCCCTTTCCATAGAGCAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252011.8
ENST00000373323.8
ENST00000373325.6
ENST00000484417.5
ENST00000652169.1
CDS CCA 72 bp ACGCAGGGTGTATGTGCAGCTCATGGTCATCACGGATaGTCCTTGGAACATAGAAGAATTTTGTCTGAAGCA +
Preference number: 6 (lower is better)
Translates to: TQGVCAAHGHHG*SLEHRRILSEA
Trigger: TGCTTCAGACAAAATTCTTCTATGTTCCAAGGACCATCCGTGATGACCATGAGCTGCACATACACCCTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482619.1
ENST00000493450.1
CDS CCA 72 bp CATGGACAAGTTGCCTCAAATACAGACAACTCAGGGTaGGGAGGTGAGCTCATACAATGGGCAAATGAATCA +
Preference number: 6 (lower is better)
Translates to: HGQVASNTDNSG*GGELIQWANES
Trigger: TGATTCATTTGCCCATTGTATGAGCTCACCTCCCCACCCTGAGTTGTCTGTATTTGAGGCAACTTGTCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493450.1
CDS CCA 72 bp TTTAGAGTCCTTATTGTGTGCGTGAGACTTCTGGTTTaGGGGGACCACAAAGATATTCTGGATCTGCATCAT +
Preference number: 6 (lower is better)
Translates to: FRVLIVCVRLLV*GDHKDILDLHH
Trigger: ATGATGCAGATCCAGAATATCTTTGTGGTCCCCCCAAACCAGAAGTCTCACGCACACAATAAGGACTCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449559.1
CDS CAA 72 bp GGTGTATGTGCAGCTCATGGTCATCACGGATGGTCCTaGGAACATAGAAGAATTTTGTCTGAAGCACATTTT +
Preference number: 6 (lower is better)
Translates to: GVCAAHGHHGWS*EHRRILSEAHF
Trigger: AAAATGTGCTTCAGACAAAATTCTTCTATGTTCCAAGGACCATCCGTGATGACCATGAGCTGCACATACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482619.1
ENST00000493450.1
CDS CAA 90 bp CTGACGCAGGGTGTATGTGCAGCTCATGGTCATCACGGATGGTCCTaGGAACATAGAAGAATTTTGTCTGAAGCACATTTTAAATACTTA +
Preference number: 6 (lower is better)
Translates to: LTQGVCAAHGHHGWS*EHRRILSEAHFKYL
Trigger: TAAGTATTTAAAATGTGCTTCAGACAAAATTCTTCTATGTTCCAAGGACCATCCGTGATGACCATGAGCTGCACATACACCCTGCGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482619.1
ENST00000493450.1
CDS CCA 72 bp CAAATGAATCACAATACTGACAGGCTACAACATGCCTaGAGTAACAAAGAGAACATACTAGAGATCATTGTA +
Preference number: 6 (lower is better)
Translates to: QMNHNTDRLQHA*SNKENILEIIV
Trigger: TACAATGATCTCTAGTATGTTCTCTTTGTTACTCCAGGCATGTTGTAGCCTGTCAGTATTGTGATTCATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493450.1