RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DHX33 (Homo sapiens)

Ensembl gene IDs: ENSG00000005100

Ensembl transcript IDs: ENST00000225296.8, ENST00000433302.7, ENST00000572490.1, ENST00000574023.1, ENST00000575153.5

Found 657 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGACGCAGGCCGGCTTGCAGTGGAAGAGGACAGACGACGGGTGGATaGCCACTGGCTGGTGGGTGTCCGTGGTGGCATAGGTGCCATCTG +
Preference number: 1 (lower is better)
Translates to: RRRPACSGRGQTTGG*PLAGGCPWWHRCHL
Trigger: CAGATGGCACCTATGCCACCACGGACACCCACCAGCCAGTGGCCATCCACCCGTCGTCTGTCCTCTTCCACTGCAAGCCGGCCTGCGTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR TCA 90 bp CCGTGGTGGCATAGGTGCCATCTGGCTGAAGCTCGGCGGTGCTCATaGAGAGGCTGTGAGCCAGGCAGCGGCGGACACTCTCCACGTCTC +
Preference number: 1 (lower is better)
Translates to: PWWHRCHLAEARRCS*RGCEPGSGGHSPRL
Trigger: GAGACGTGGAGAGTGTCCGCCGCTGCCTGGCTCACAGCCTCTTCATGAGCACCGCCGAGCTTCAGCCAGATGGCACCTATGCCACCACGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR CCA 90 bp GGCCGGCTTGCAGTGGAAGAGGACAGACGACGGGTGGATGGCCACTaGCTGGTGGGTGTCCGTGGTGGCATAGGTGCCATCTGGCTGAAG +
Preference number: 1 (lower is better)
Translates to: GRLAVEEDRRRVDGH*LVGVRGGIGAIWLK
Trigger: CTTCAGCCAGATGGCACCTATGCCACCACGGACACCCACCAGCCAGTGGCCATCCACCCGTCGTCTGTCCTCTTCCACTGCAAGCCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR CCA 90 bp GATGGCCACTGGCTGGTGGGTGTCCGTGGTGGCATAGGTGCCATCTaGCTGAAGCTCGGCGGTGCTCATGAAGAGGCTGTGAGCCAGGCA +
Preference number: 1 (lower is better)
Translates to: DGHWLVGVRGGIGAI*LKLGGAHEEAVSQA
Trigger: TGCCTGGCTCACAGCCTCTTCATGAGCACCGCCGAGCTTCAGCCAGATGGCACCTATGCCACCACGGACACCCACCAGCCAGTGGCCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR GCA 90 bp AGAGCCGGTAGCAGATGCCACTGTCCTCTCTGCCAGCCCTCCCTGTaGGCTGCCAAGCCTGCGTCTTCGATACCCGCTGCACTGCTAACA +
Preference number: 1 (lower is better)
Translates to: RAGSRCHCPLCQPSL*AAKPASSIPAALLT
Trigger: TGTTAGCAGTGCAGCGGGTATCGAAGACGCAGGCTTGGCAGCGCACAGGGAGGGCTGGCAGAGAGGACAGTGGCATCTGCTACCGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR GCA 90 bp TTTGCGATAGCCCTTTGGGGCCCCTTGGAAGACTCGGAGCTGCTGTaGATAGGGCAGGGAGGCGTACAGAGGAAGGACCAGCATCGCAGG +
Preference number: 1 (lower is better)
Translates to: FAIALWGPLEDSELL*IGQGGVQRKDQHRR
Trigger: CCTGCGATGCTGGTCCTTCCTCTGTACGCCTCCCTGCCCTATGCACAGCAGCTCCGAGTCTTCCAAGGGGCCCCAAAGGGCTATCGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR CCA 90 bp CAGGGAGGCGTACAGAGGAAGGACCAGCATCGCAGGGCAGCCGTCTaGGAGGTGCTTTGCAATGTCTCGGCACGTCTTGCTCATGGCTTC +
Preference number: 1 (lower is better)
Translates to: QGGVQRKDQHRRAAV*EVLCNVSARLAHGF
Trigger: GAAGCCATGAGCAAGACGTGCCGAGACATTGCAAAGCACCTCCCAGACGGCTGCCCTGCGATGCTGGTCCTTCCTCTGTACGCCTCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR GCA 90 bp GCGTACAGAGGAAGGACCAGCATCGCAGGGCAGCCGTCTGGGAGGTaGTTTGCAATGTCTCGGCACGTCTTGCTCATGGCTTCGATCTCC +
Preference number: 1 (lower is better)
Translates to: AYRGRTSIAGQPSGR*FAMSRHVLLMASIS
Trigger: GGAGATCGAAGCCATGAGCAAGACGTGCCGAGACATTGCAAAGCACCTCCCAGACGGCTGCCCTGCGATGCTGGTCCTTCCTCTGTACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR GCA 90 bp ACTTGTTGGTGTAGAGCAGCTCAGTGTACACGACGCAGGCCGGCTTaGAGTGGAAGAGGACAGACGACGGGTGGATGGCCACTGGCTGGT +
Preference number: 1 (lower is better)
Translates to: TCWCRAAQCTRRRPA*SGRGQTTGGWPLAG
Trigger: ACCAGCCAGTGGCCATCCACCCGTCGTCTGTCCTCTTCCACTGCAAGCCGGCCTGCGTCGTGTACACTGAGCTGCTCTACACCAACAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR TCA 90 bp AAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCCAGGGACCAGTaGTTCTGGCGGCATCCTGGGGCGGCTCAGTTTCTGGCGGTTCTC +
Preference number: 1 (lower is better)
Translates to: KPAVRTTVVQAPRDQ*FWRHPGAAQFLAVL
Trigger: GAGAACCGCCAGAAACTGAGCCGCCCCAGGATGCCGCCAGAATCACTGGTCCCTGGGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR GCA 90 bp CCAGCCCTCCCTGTGCGCTGCCAAGCCTGCGTCTTCGATACCCGCTaGACTGCTAACACCTCAAGACCACTGTCAGGGTTATACTTCTTT +
Preference number: 1 (lower is better)
Translates to: PALPVRCQACVFDTR*TANTSRPLSGLYFF
Trigger: AAAGAAGTATAACCCTGACAGTGGTCTTGAGGTGTTAGCAGTGCAGCGGGTATCGAAGACGCAGGCTTGGCAGCGCACAGGGAGGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR CCA 90 bp CCAGGAGGCTCCTTTACTGGTCTCTGCTTGGAGACAGACACAGAGTaGTCCACCCTGAGACACAAGCGTTCAGTAGGGATCGCCATCCCA +
Preference number: 1 (lower is better)
Translates to: PGGSFTGLCLETDTE*STLRHKRSVGIAIP
Trigger: TGGGATGGCGATCCCTACTGAACGCTTGTGTCTCAGGGTGGACCACTCTGTGTCTGTCTCCAAGCAGAGACCAGTAAAGGAGCCTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR CCA 90 bp AACTGTAGTCCAAGCTCCCAGGGACCAGTGATTCTGGCGGCATCCTaGGGCGGCTCAGTTTCTGGCGGTTCTCAGCTTCCTCCTAAAGTA +
Preference number: 1 (lower is better)
Translates to: NCSPSSQGPVILAAS*GGSVSGGSQLPPKV
Trigger: TACTTTAGGAGGAAGCTGAGAACCGCCAGAAACTGAGCCGCCCCAGGATGCCGCCAGAATCACTGGTCCCTGGGAGCTTGGACTACAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR TCA 90 bp TGGGGCTGCTCCATCAGGCCACAGCTTCCAGAAAGAGAGCATCCATaGTCTCTGAAGAGCCTCTTGGGCAGCTTGGCCCCTGGTTATAAC +
Preference number: 1 (lower is better)
Translates to: WGCSIRPQLPEREHP*SLKSLLGSLAPGYN
Trigger: GTTATAACCAGGGGCCAAGCTGCCCAAGAGGCTCTTCAGAGATCATGGATGCTCTCTTTCTGGAAGCTGTGGCCTGATGGAGCAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR GCA 90 bp TTTGCAATGTCTCGGCACGTCTTGCTCATGGCTTCGATCTCCTCCTaGCCAGTGAGGAACACCAGGATGTCCTGTGAAGAAGGGGCTTCC +
Preference number: 1 (lower is better)
Translates to: FAMSRHVLLMASISS*PVRNTRMSCEEGAS
Trigger: GGAAGCCCCTTCTTCACAGGACATCCTGGTGTTCCTCACTGGGCAGGAGGAGATCGAAGCCATGAGCAAGACGTGCCGAGACATTGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR TCA 90 bp CAGGAAGCTTACATGTCTCCTGAAAGCACTGACAGGGTCACGCACTaGGGACCAGGAGGCTCCTTTACTGGTCTCTGCTTGGAGACAGAC +
Preference number: 1 (lower is better)
Translates to: QEAYMSPESTDRVTH*GPGGSFTGLCLETD
Trigger: GTCTGTCTCCAAGCAGAGACCAGTAAAGGAGCCTCCTGGTCCTCAGTGCGTGACCCTGTCAGTGCTTTCAGGAGACATGTAAGCTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR GCA 90 bp CAGCTTCCTCCTAAAGTACTCAGGGGCAGCCTCGTACAGCCACTGTaGATCTATGACGCAGAGGTCCCGCATGTAGCACTTGTTGGTGTA +
Preference number: 1 (lower is better)
Translates to: QLPPKVLRGSLVQPL*IYDAEVPHVALVGV
Trigger: TACACCAACAAGTGCTACATGCGGGACCTCTGCGTCATAGATGCACAGTGGCTGTACGAGGCTGCCCCTGAGTACTTTAGGAGGAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR CCA 90 bp GAAATAAAGACTGAGCCGGACTTGACATACACAACTCCGGACAGATaGGACCCTGGAATGGGGCTGCTCCATCAGGCCACAGCTTCCAGA +
Preference number: 1 (lower is better)
Translates to: EIKTEPDLTYTTPDR*DPGMGLLHQATASR
Trigger: TCTGGAAGCTGTGGCCTGATGGAGCAGCCCCATTCCAGGGTCCCATCTGTCCGGAGTTGTGTATGTCAAGTCCGGCTCAGTCTTTATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR CCA 90 bp AGACGGAGACAAGCGCGGCGTGCAGGTAATCATTCTGAGGCTGTTTaGTGTAAAACACCTGGATCGGATGCTGCCGACCCTCTAGGTAGA +
Preference number: 1 (lower is better)
Translates to: RRRQARRAGNHSEAV*CKTPGSDAADPLGR
Trigger: TCTACCTAGAGGGTCGGCAGCATCCGATCCAGGTGTTTTACACCAAACAGCCTCAGAATGATTACCTGCACGCCGCGCTTGTCTCCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR GCA 90 bp CCTTCAGCTGATTCCAAGGCTTCTCTAAGCGCCAACCTGGAAGCCTaGTGTAAGGACAACTGTAGTCCAAGCTCCCAGGGACCAGTGATT +
Preference number: 1 (lower is better)
Translates to: PSADSKASLSANLEA*CKDNCSPSSQGPVI
Trigger: AATCACTGGTCCCTGGGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGCGCTTAGAGAAGCCTTGGAATCAGCTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR TCA 90 bp GCAGTCCTGCCCCTTGTAGTGTTACTCTGGGTGTTGCACACTCCATaGTTACTAGAAGACAAACACCTGAGGCATGCAATCTGCTTGGAG +
Preference number: 1 (lower is better)
Translates to: AVLPLVVLLWVLHTP*LLEDKHLRHAICLE
Trigger: CTCCAAGCAGATTGCATGCCTCAGGTGTTTGTCTTCTAGTAATCATGGAGTGTGCAACACCCAGAGTAACACTACAAGGGGCAGGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR GCA 90 bp GCTGAAATGGTACACAGTCACTCCTCATGCCCGCATGTTCACTGGTaGCCAGTTAGAGAGAAAAATGGCAACTGTGTATGTGGGAGTCAC +
Preference number: 1 (lower is better)
Translates to: AEMVHSHSSCPHVHW*PVREKNGNCVCGSH
Trigger: GTGACTCCCACATACACAGTTGCCATTTTTCTCTCTAACTGGGCACCAGTGAACATGCGGGCATGAGGAGTGACTGTGTACCATTTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR GCA 90 bp GTGGATATCCTCCAATTCCCTCTGACAATGAGGGTTAGAGAGAGGTaGCTAGCAGTTAGAAAGCAGCAAAGCCAGATTGTCCCAAGTCCC +
Preference number: 1 (lower is better)
Translates to: VDILQFPLTMRVRER*LAVRKQQSQIVPSP
Trigger: GGGACTTGGGACAATCTGGCTTTGCTGCTTTCTAACTGCTAGGCACCTCTCTCTAACCCTCATTGTCAGAGGGAATTGGAGGATATCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR GCA 90 bp ACATTCAGCCTAACGGCTCCCAACTCACTGTACGTGTGTCGTGCGTaGTCCAGGCATAGTTCTGGGTACTTTCCATTCCTTTTCTCTAAA +
Preference number: 1 (lower is better)
Translates to: TFSLTAPNSLYVCRA*SRHSSGYFPFLFSK
Trigger: TTTAGAGAAAAGGAATGGAAAGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGTTGGGAGCCGTTAGGCTGAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR TCA 90 bp CAAACACCTGAGGCATGCAATCTGCTTGGAGTGCATCTATTTACATaGAGCTGCTCACGGGAGCTGGTGATTCTTCCAGATATGGGTTTC +
Preference number: 1 (lower is better)
Translates to: QTPEACNLLGVHLFT*SCSRELVILPDMGF
Trigger: GAAACCCATATCTGGAAGAATCACCAGCTCCCGTGAGCAGCTTCATGTAAATAGATGCACTCCAAGCAGATTGCATGCCTCAGGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR GCA 90 bp ATATGTCCATGTCTATATGGTTCAGTCCCAGGAGTTGAGCAAAGATaGTTTCACGCTCCTGGAAGTCAGGCACCTTCAGCTGATTCCAAG +
Preference number: 1 (lower is better)
Translates to: ICPCLYGSVPGVEQR*FHAPGSQAPSADSK
Trigger: CTTGGAATCAGCTGAAGGTGCCTGACTTCCAGGAGCGTGAAAGCATCTTTGCTCAACTCCTGGGACTGAACCATATAGACATGGACATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR CCA 90 bp ATTAAACAAGAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTaGCCCTTCCAGAAAATCTCCCTCAGTCACAAGAACTTGGGATAT +
Preference number: 1 (lower is better)
Translates to: IKQELRATSKLRNLL*PFQKISLSHKNLGY
Trigger: ATATCCCAAGTTCTTGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTCTTGTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR TCA 90 bp CTACACACACAAAACACTGATAGGTCAGTTTCCCATGTCTACACGTaGCAGGATTCAGAAGGTACAAATCAACCTTCACCCAGGAAGCTT +
Preference number: 1 (lower is better)
Translates to: LHTQNTDRSVSHVYT*QDSEGTNQPSPRKL
Trigger: AAGCTTCCTGGGTGAAGGTTGATTTGTACCTTCTGAATCCTGTCACGTGTAGACATGGGAAACTGACCTATCAGTGTTTTGTGTGTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR GCA 90 bp TGGCCCTTCCAGAAAATCTCCCTCAGTCACAAGAACTTGGGATATTaGTGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAAC +
Preference number: 1 (lower is better)
Translates to: WPFQKISLSHKNLGY*CTSHHMASSNIQPN
Trigger: GTTAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACAGCAATATCCCAAGTTCTTGTGACTGAGGGAGATTTTCTGGAAGGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR CCA 90 bp TGCTCACGGGAGCTGGTGATTCTTCCAGATATGGGTTTCGTAGGTTaGCAAAGAGTTATCACACCATCAGAGATTTTACCAATGGAAAGA +
Preference number: 1 (lower is better)
Translates to: CSRELVILPDMGFVG*QRVITPSEILPMER
Trigger: TCTTTCCATTGGTAAAATCTCTGATGGTGTGATAACTCTTTGCCAACCTACGAAACCCATATCTGGAAGAATCACCAGCTCCCGTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR TCA 90 bp AGCTTCATCCAAAATGACACAGCTGTATTTCCGAAGCAAAGAGTCTaGAATTGCTTCACGCAGAAGCATGCCATCTGTCAGAAACTTGAT +
Preference number: 1 (lower is better)
Translates to: SFIQNDTAVFPKQRV*NCFTQKHAICQKLD
Trigger: ATCAAGTTTCTGACAGATGGCATGCTTCTGCGTGAAGCAATTTCAGACTCTTTGCTTCGGAAATACAGCTGTGTCATTTTGGATGAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR TCA 90 bp GGTGTCCGTGGTGGCATAGGTGCCATCTGGCTGAAGCTCGGCGGTGCTCATGAAGCTCCCAGGGACCAGTaGTTCTGGCGGCATCCTGGG +
Preference number: 2 (lower is better)
Translates to: GVRGGIGAIWLKLGGAHEAPRDQ*FWRHPG
Trigger: CCCAGGATGCCGCCAGAATCACTGGTCCCTGGGAGC...TTCATGAGCACCGCCGAGCTTCAGCCAGATGGCACCTATGCCACCACGGACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR TCA 90 bp GCCATCTGGCTGAAGCTCGGCGGTGCTCATGAAGAGGCTGTGAGCCAGGCAGCGTCTCCTCCTGCCCAGTaGGGAACACCAGGATGTCCT +
Preference number: 2 (lower is better)
Translates to: AIWLKLGGAHEEAVSQAASPPAQ*GTPGCP
Trigger: AGGACATCCTGGTGTTCCTCACTGGGCAGGAGGAGA...CGCTGCCTGGCTCACAGCCTCTTCATGAGCACCGCCGAGCTTCAGCCAGATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR GCA 90 bp TGTACACGACGCAGGCCGGCTTGCAGTGGAAGAGGACAGACGACGGGTGGATGGCCGTGGTGGCATAGGTaGCATCTGGCTGAAGCTCGG +
Preference number: 2 (lower is better)
Translates to: CTRRRPACSGRGQTTGGWPWWHR*HLAEAR
Trigger: CCGAGCTTCAGCCAGATGGCACCTATGCCACCACGG...CCATCCACCCGTCGTCTGTCCTCTTCCACTGCAAGCCGGCCTGCGTCGTGTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR CAA 90 bp GCAGGGCAGCCGTCTGGGAGGTGCTTTGCAATGTCTCGGCACGTCTaGCTCATGGCTTCGATCTCCTCCTGCCCAGTGAGGAACACCAGG +
Preference number: 2 (lower is better)
Translates to: AGQPSGRCFAMSRHV*LMASISSCPVRNTR
Trigger: CCTGGTGTTCCTCACTGGGCAGGAGGAGATCGAAGCCATGAGCAAGACGTGCCGAGACATTGCAAAGCACCTCCCAGACGGCTGCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR GCA 90 bp TCAGTGTACACGACGCAGGCCGGCTTGCAGTGGAAGAGGACAGACGACGGGTGGAGAGCCGGTAGCAGATaGCACTGTCCTCTCTGCCAG +
Preference number: 2 (lower is better)
Translates to: SVYTTQAGLQWKRTDDGWRAGSR*HCPLCQ
Trigger: CTGGCAGAGAGGACAGTGGCATCTGCTACCGGCTCT...CCACCCGTCGTCTGTCCTCTTCCACTGCAAGCCGGCCTGCGTCGTGTACACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR CAA 90 bp GGTCATGTGATCCCCCTCGCTGGATATGAACTTCTTGCGGACCCCTaGCACTTCCTCTCGCCGGGAAGGAGGGTTGTGGAGGACGCTGTC +
Preference number: 2 (lower is better)
Translates to: GHVIPLAGYELLADP*HFLSPGRRVVEDAV
Trigger: GACAGCGTCCTCCACAACCCTCCTTCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAGAAGTTCATATCCAGCGAGGGGGATCACATGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR GCA 90 bp GAACTTCTTGCGGACCCCTTGCACTTCCTCTCGCCGGGAAGGAGGGTTGTGGAGCAGCCGTCTGGGAGGTaGTTTGCAATGTCTCGGCAC +
Preference number: 2 (lower is better)
Translates to: ELLADPLHFLSPGRRVVEQPSGR*FAMSRH
Trigger: GTGCCGAGACATTGCAAAGCACCTCCCAGACGGCTG...CTCCACAACCCTCCTTCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAGAAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR TCA 90 bp GAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCGCTCCCAGGGACCAGTaGTTCTGGCGGCATCCTGGG +
Preference number: 2 (lower is better)
Translates to: ELRATSKLRNLLWPFQKIAPRDQ*FWRHPG
Trigger: CCCAGGATGCCGCCAGAATCACTGGTCCCTGGGAGC...GATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR-3UTR TCA 90 bp GGTGTCCGTGGTGGCATAGGTGCCATCTGGCTGAAGCTCGGCGGTGCTCATGAAGGACGGGGGCGCCATTaGAATACTGAGAGAACAGGT +
Preference number: 2 (lower is better)
Translates to: GVRGGIGAIWLKLGGAHEGRGRH*NTERTG
Trigger: ACCTGTTCTCTCAGTATTTCAATGGCGCCCCCGTCC...TTCATGAGCACCGCCGAGCTTCAGCCAGATGGCACCTATGCCACCACGGACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR TCA 90 bp ATAGGTGCCATCTGGCTGAAGCTCGGCGGTGCTCATGAAGAGGCTGTGAGCCAGCCCCCTCGCTGGATATaGACTTCTTGCGGACCCCTT +
Preference number: 2 (lower is better)
Translates to: IGAIWLKLGGAHEEAVSQPPRWI*TSCGPL
Trigger: AAGGGGTCCGCAAGAAGTTCATATCCAGCGAGGGGG...CTGGCTCACAGCCTCTTCATGAGCACCGCCGAGCTTCAGCCAGATGGCACCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR TCA 90 bp GTTCTCAGCTTCCTCCTAAAGTACTCAGGGGCAGCCTCGTACAGCCACTGTGCACTCATGAAGAGGCTGTaGGCCAGGCAGCGGCGGACA +
Preference number: 2 (lower is better)
Translates to: VLSFLLKYSGAASYSHCALMKRL*ARQRRT
Trigger: TGTCCGCCGCTGCCTGGCTCACAGCCTCTTCATGAG...TGCACAGTGGCTGTACGAGGCTGCCCCTGAGTACTTTAGGAGGAAGCTGAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR CCA 90 bp GGTGTCCGTGGTGGCATAGGTGCCATCTGGCTGAAGCTCGGCGGTGCTCATGAAGAAGAAGGGGCTTCCTaGTGGATCTGGAAGACGGAG +
Preference number: 2 (lower is better)
Translates to: GVRGGIGAIWLKLGGAHEEEGAS*WIWKTE
Trigger: CTCCGTCTTCCAGATCCACCAGGAAGCCCCTTCTTC...TTCATGAGCACCGCCGAGCTTCAGCCAGATGGCACCTATGCCACCACGGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR CCA 90 bp CTTGCAGTGGAAGAGGACAGACGACGGGTGGATGGCCACTGGCTGGTGGGTGTCGCTGAAGCATCACACTaGCCAGGTTACACCTCTGGA +
Preference number: 2 (lower is better)
Translates to: LAVEEDRRRVDGHWLVGVAEASH*PGYTSG
Trigger: TCCAGAGGTGTAACCTGGCCAGTGTGATGCTTCAGC...GACACCCACCAGCCAGTGGCCATCCACCCGTCGTCTGTCCTCTTCCACTGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR CCA 90 bp TGTTGGTGTAGAGCAGCTCAGTGTACACGACGCAGGCCGGCTTGCAGTGGAAGAGGCATAGGTGCCATCTaGCTGAAGCTCGGCGGTGCT +
Preference number: 2 (lower is better)
Translates to: CWCRAAQCTRRRPACSGRGIGAI*LKLGGA
Trigger: AGCACCGCCGAGCTTCAGCCAGATGGCACCTATGCC...TCTTCCACTGCAAGCCGGCCTGCGTCGTGTACACTGAGCTGCTCTACACCAACA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR CCA 90 bp GGAAGAGGACAGACGACGGGTGGATGGCCACTGGCTGGTGGGTGTCCGTGGTGGCATTCTGAGGCTGTTTaGTGTAAAACACCTGGATCG +
Preference number: 2 (lower is better)
Translates to: GRGQTTGGWPLAGGCPWWHSEAV*CKTPGS
Trigger: CGATCCAGGTGTTTTACACCAAACAGCCTCAGAATG...CCACCACGGACACCCACCAGCCAGTGGCCATCCACCCGTCGTCTGTCCTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR TCA 90 bp GGTGTCCGTGGTGGCATAGGTGCCATCTGGCTGAAGCTCGGCGGTGCTCATGAAGCGCCATTGAAATACTaGGAGAACAGGTCCACATCC +
Preference number: 2 (lower is better)
Translates to: GVRGGIGAIWLKLGGAHEAPLKY*ENRSTS
Trigger: GGATGTGGACCTGTTCTCTCAGTATTTCAATGGCGC...TTCATGAGCACCGCCGAGCTTCAGCCAGATGGCACCTATGCCACCACGGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR TCA 90 bp GCCATCTGGCTGAAGCTCGGCGGTGCTCATGAAGAGGCTGTGAGCCAGGCAGCGCGATGTTGGTTGAAATaGTCACTTTGCGATAGCCCT +
Preference number: 2 (lower is better)
Translates to: AIWLKLGGAHEEAVSQAARCWLK*SLCDSP
Trigger: AGGGCTATCGCAAAGTGATCATTTCAACCAACATCG...CGCTGCCTGGCTCACAGCCTCTTCATGAGCACCGCCGAGCTTCAGCCAGATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR TCA 90 bp GAACTTCTTGCGGACCCCTTGCACTTCCTCTCGCCGGGAAGGAGGGTTGTGGAGTTCATTGCTAGAAGCTaGAGCATCACACTGGCCAGG +
Preference number: 2 (lower is better)
Translates to: ELLADPLHFLSPGRRVVEFIARS*SITLAR
Trigger: CCTGGCCAGTGTGATGCTTCAGCTTCTAGCAATGAA...CTCCACAACCCTCCTTCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAGAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR TCA 90 bp TGTTGGTGTAGAGCAGCTCAGTGTACACGACGCAGGCCGGCTTGCAGTGGAAGATTGAGCAGGGTCATGTaGTCCCCCTCGCTGGATATG +
Preference number: 2 (lower is better)
Translates to: CWCRAAQCTRRRPACSGRLSRVM*SPSLDM
Trigger: CATATCCAGCGAGGGGGATCACATGACCCTGCTCAA...TCTTCCACTGCAAGCCGGCCTGCGTCGTGTACACTGAGCTGCTCTACACCAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR TCA 90 bp GAACTTCTTGCGGACCCCTTGCACTTCCTCTCGCCGGGAAGGAGGGTTGTGGAGCCGAAGCAAAGAGTCTaGAATTGCTTCACGCAGAAG +
Preference number: 2 (lower is better)
Translates to: ELLADPLHFLSPGRRVVEPKQRV*NCFTQK
Trigger: CTTCTGCGTGAAGCAATTTCAGACTCTTTGCTTCGG...CTCCACAACCCTCCTTCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAGAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR TCA 90 bp CTTCTTGCGGACCCCTTGCACTTCCTCTCGCCGGGAAGGAGGGTTGTGGAGGACTGGATAGTCCGTTCGTaGGCTTCATCCAAAATGACA +
Preference number: 2 (lower is better)
Translates to: LLADPLHFLSPGRRVVEDWIVRS*ASSKMT
Trigger: TGTCATTTTGGATGAAGCTCACGAACGGACTATCCA...GTCCTCCACAACCCTCCTTCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR TCA 90 bp CTTTGGGGCCCCTTGGAAGACTCGGAGCTGCTGTGCATAGGGCAGGGAGGCGTACACATCCATCGTAGCTaGCATCACAATCACTTTCAG +
Preference number: 2 (lower is better)
Translates to: LWGPLEDSELLCIGQGGVHIHRS*HHNHFQ
Trigger: CTGAAAGTGATTGTGATGTCAGCTACGATGGATGTG...TACGCCTCCCTGCCCTATGCACAGCAGCTCCGAGTCTTCCAAGGGGCCCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR CCA 90 bp TGTACACGACGCAGGCCGGCTTGCAGTGGAAGAGGACAGACGACGGGTGGATGGGGAGTCAGGGTAAGCTaGTCATCCTTATGTTCAAGA +
Preference number: 2 (lower is better)
Translates to: CTRRRPACSGRGQTTGGWGVRVS*SSLCSR
Trigger: TCTTGAACATAAGGATGACCAGCTTACCCTGACTCC...CCATCCACCCGTCGTCTGTCCTCTTCCACTGCAAGCCGGCCTGCGTCGTGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR CAA 90 bp TGCACAGGACCACGGCTAGTGTTGGAAATAAAGACTGAGCCGGACTaGACATACACAACTCCGGACAGATGGGACCCTGGAATGGGGCTG +
Preference number: 2 (lower is better)
Translates to: CTGPRLVLEIKTEPD*TYTTPDRWDPGMGL
Trigger: CAGCCCCATTCCAGGGTCCCATCTGTCCGGAGTTGTGTATGTCAAGTCCGGCTCAGTCTTTATTTCCAACACTAGCCGTGGTCCTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR-3UTR TCA 90 bp GAGGTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGGCTCCCAGGGACCAGTaGTTCTGGCGGCATCCTGGG +
Preference number: 2 (lower is better)
Translates to: EVRDNSTSLWKLLQKSVLAPRDQ*FWRHPG
Trigger: CCCAGGATGCCGCCAGAATCACTGGTCCCTGGGAGC...CAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR-3UTR GCA 90 bp GAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTACGTGTGTCGTGCGTaGTCCAGGCATAGTTCTGGG +
Preference number: 2 (lower is better)
Translates to: ELRATSKLRNLLWPFQKIYVCRA*SRHSSG
Trigger: CCCAGAACTATGCCTGGAGCACGCACGACACACGTA...GATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR-3UTR CCA 90 bp AAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTATGCTTTCACGCTCCTaGAAGTCAGGCACCTTCAGC +
Preference number: 2 (lower is better)
Translates to: KGNIQAPQPPVALPENLPMLSRS*KSGTFS
Trigger: GCTGAAGGTGCCTGACTTCCAGGAGCGTGAAAGCAT...AGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR-3UTR CCA 90 bp GGCGGACACTCTCCACGTCTCCTCGGGATGATGCGATTGGCATTGACATCTTTAGCCAGGTTACACCTCTaGATCTCTGGCACGGTCATC +
Preference number: 2 (lower is better)
Translates to: GGHSPRLLGMMRLALTSLARLHL*ISGTVI
Trigger: GATGACCGTGCCAGAGATCCAGAGGTGTAACCTGGC...TAAAGATGTCAATGCCAATCGCATCATCCCGAGGAGACGTGGAGAGTGTCCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR TCA 90 bp TGTAGCACTTGTTGGTGTAGAGCAGCTCAGTGTACACGACGCAGGCCGGCTTGCCATCTGTCAGAAACTTaGTCCTGGTGTCTTCTGAGG +
Preference number: 2 (lower is better)
Translates to: CSTCWCRAAQCTRRRPACHLSET*SWCLLR
Trigger: CCTCAGAAGACACCAGGATCAAGTTTCTGACAGATG...GCAAGCCGGCCTGCGTCGTGTACACTGAGCTGCTCTACACCAACAAGTGCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR GCA 90 bp TCCAGAAAGAGAGCATCCATGATCTCTGAAGAGCCTCTTGGGCAGCTTGGCCCCGCCAACCTGGAAGCCTaGTGTAAGGACAACTGTAGT +
Preference number: 2 (lower is better)
Translates to: SRKRASMISEEPLGQLGPANLEA*CKDNCS
Trigger: ACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGC...GGGGCCAAGCTGCCCAAGAGGCTCTTCAGAGATCATGGATGCTCTCTTTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR-3UTR GCA 90 bp AAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTGCCAACCTGGAAGCCTaGTGTAAGGACAACTGTAGT +
Preference number: 2 (lower is better)
Translates to: KGNIQAPQPPVALPENLPANLEA*CKDNCS
Trigger: ACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGC...AGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR-3UTR GCA 90 bp GGATCTCTGGCACGGTCATCTTATCAAACTTCTCAAACTCGTCCTCCGTGTAGAGACTCGGAGCTGCTGTaGATAGGGCAGGGAGGCGTA +
Preference number: 2 (lower is better)
Translates to: GSLARSSYQTSQTRPPCRDSELL*IGQGGV
Trigger: TACGCCTCCCTGCCCTATGCACAGCAGCTCCGAGTC...TCTACACGGAGGACGAGTTTGAGAAGTTTGATAAGATGACCGTGCCAGAGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR CCA 90 bp TGGCACGGTCATCTTATCAAACTTCTCAAACTCGTCCTCCGTGTAGAGCCGGTAGGCACGTCTTGCTCATaGCTTCGATCTCCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: WHGHLIKLLKLVLRVEPVGTSCS*LRSPPA
Trigger: GGCAGGAGGAGATCGAAGCCATGAGCAAGACGTGCC...TACCGGCTCTACACGGAGGACGAGTTTGAGAAGTTTGATAAGATGACCGTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR TCA 90 bp GTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTGCTCCCAGGGACCAGTaGTTCTGGCGGCATCCTGGG +
Preference number: 2 (lower is better)
Translates to: VRDNSTSLWKLLQKSVLFAPRDQ*FWRHPG
Trigger: CCCAGGATGCCGCCAGAATCACTGGTCCCTGGGAGC...AAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR-3UTR TCA 90 bp AGCAGTAACATTCAGCCTAACGGCTCCCAACTCACTGTACGTGTGTCGTGCGTGTCAGGCACCTTCAGCTaGTTCCAAGGCTTCTCTAAG +
Preference number: 2 (lower is better)
Translates to: SSNIQPNGSQLTVRVSCVSGTFS*FQGFSK
Trigger: CTTAGAGAAGCCTTGGAATCAGCTGAAGGTGCCTGA...CACGCACGACACACGTACAGTGAGTTGGGAGCCGTTAGGCTGAATGTTACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR-3UTR GCA 90 bp GGCGGACACTCTCCACGTCTCCTCGGGATGATGCGATTGGCATTGACATCTTTAGCCAACCTGGAAGCCTaGTGTAAGGACAACTGTAGT +
Preference number: 2 (lower is better)
Translates to: GGHSPRLLGMMRLALTSLANLEA*CKDNCS
Trigger: ACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGC...TAAAGATGTCAATGCCAATCGCATCATCCCGAGGAGACGTGGAGAGTGTCCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR GCA 90 bp TCCAGAAAGAGAGCATCCATGATCTCTGAAGAGCCTCTTGGGCAGCTTGGCCCCTCCTTTACTGGTCTCTaGTTGGAGACAGACACAGAG +
Preference number: 2 (lower is better)
Translates to: SRKRASMISEEPLGQLGPSFTGL*LETDTE
Trigger: CTCTGTGTCTGTCTCCAAGCAGAGACCAGTAAAGGA...GGGGCCAAGCTGCCCAAGAGGCTCTTCAGAGATCATGGATGCTCTCTTTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR-3UTR CCA 90 bp ACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTTTCCATATGCTTTCACGCTCCTaGAAGTCAGGCACCTTCAGC +
Preference number: 2 (lower is better)
Translates to: THCTCVVRAPGIVLGTFHMLSRS*KSGTFS
Trigger: GCTGAAGGTGCCTGACTTCCAGGAGCGTGAAAGCAT...ATGGAAAGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR-3UTR CCA 90 bp CATCAGGCCACAGCTTCCAGAAAGAGAGCATCCATGATCTCTGAAGAGCCTCTTCTCCGCAACCTCCTGTaGCCCTTCCAGAAAATCTCC +
Preference number: 2 (lower is better)
Translates to: HQATASRKRASMISEEPLLRNLL*PFQKIS
Trigger: GGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAG...AAGAGGCTCTTCAGAGATCATGGATGCTCTCTTTCTGGAAGCTGTGGCCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR-3UTR CCA 90 bp TGGCACGGTCATCTTATCAAACTTCTCAAACTCGTCCTCCGTGTAGAGCCGGTATTTGCGATAGCCCTTTaGGGCCCCTTGGAAGACTCG +
Preference number: 2 (lower is better)
Translates to: WHGHLIKLLKLVLRVEPVFAIAL*GPLEDS
Trigger: CGAGTCTTCCAAGGGGCCCCAAAGGGCTATCGCAAA...TACCGGCTCTACACGGAGGACGAGTTTGAGAAGTTTGATAAGATGACCGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR CCA 90 bp GGTTCTCAGCTTCCTCCTAAAGTACTCAGGGGCAGCCTCGTACAGCCACTGTGCACACCTCTGGATCTCTaGCACGGTCATCTTATCAAA +
Preference number: 2 (lower is better)
Translates to: GSQLPPKVLRGSLVQPLCTPLDL*HGHLIK
Trigger: TTTGATAAGATGACCGTGCCAGAGATCCAGAGGTGT...GCACAGTGGCTGTACGAGGCTGCCCCTGAGTACTTTAGGAGGAAGCTGAGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR CCA 90 bp GTCAGGATCTCCTCTGTACAGTGGAATTTGGGGGACATGAGGATGGTTTTGGCAGGTCCAGTTGGGCAATaGCCGCCTGAATGTGATCTG +
Preference number: 2 (lower is better)
Translates to: VRISSVQWNLGDMRMVLAGPVGQ*PPECDL
Trigger: CAGATCACATTCAGGCGGCCATTGCCCAACTGGACC...TGCCAAAACCATCCTCATGTCCCCCAAATTCCACTGTACAGAGGAGATCCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR CCA 90 bp TCTCTAAGCGCCAACCTGGAAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCACAGCAGGGAGACAATaGTCAGGATCTCCTCTGTAC +
Preference number: 2 (lower is better)
Translates to: SLSANLEACCKDNCSPSSTAGRQ*SGSPLY
Trigger: GTACAGAGGAGATCCTGACCATTGTCTCCCTGCTGT...GGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGCGCTTAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR TCA 90 bp ACACGTGACAGGATTCAGAAGGTACAAATCAACCTTCACCCAGGAAGCTTACATGACAGGGTCACGCACTaGGGACCAGGAGGCTCCTTT +
Preference number: 2 (lower is better)
Translates to: TRDRIQKVQINLHPGSLHDRVTH*GPGGSF
Trigger: AAAGGAGCCTCCTGGTCCTCAGTGCGTGACCCTGTC...ATGTAAGCTTCCTGGGTGAAGGTTGATTTGTACCTTCTGAATCCTGTCACGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR-3UTR TCA 90 bp TATGACGCAGAGGTCCCGCATGTAGCACTTGTTGGTGTAGAGCAGCTCAGTGTAAGGTCCGATAGATATTaGGCAGGGTCATGTGATCCC +
Preference number: 2 (lower is better)
Translates to: YDAEVPHVALVGVEQLSVRSDRY*AGSCDP
Trigger: GGGATCACATGACCCTGCTCAATATCTATCGGACCT...TACACTGAGCTGCTCTACACCAACAAGTGCTACATGCGGGACCTCTGCGTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR GCA 90 bp GCTGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTACGTGTGTCGTGCGTaGTCCAGGCATAGTTCTGGG +
Preference number: 2 (lower is better)
Translates to: AVLHIIWQAVTFSLTAPNYVCRA*SRHSSG
Trigger: CCCAGAACTATGCCTGGAGCACGCACGACACACGTA...GTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR-3UTR GCA 90 bp TGGCACGGTCATCTTATCAAACTTCTCAAACTCGTCCTCCGTGTAGAGCCGGTAGTCTGGGAGGTGCTTTaGAATGTCTCGGCACGTCTT +
Preference number: 2 (lower is better)
Translates to: WHGHLIKLLKLVLRVEPVVWEVL*NVSARL
Trigger: AAGACGTGCCGAGACATTGCAAAGCACCTCCCAGAC...TACCGGCTCTACACGGAGGACGAGTTTGAGAAGTTTGATAAGATGACCGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR CCA 90 bp ATCTGGAGATGGCTTCGACATGAAGTCAAAGGTGAGCACATTTGGGACTTTCATCCCTTTGGGGCCCCTTaGAAGACTCGGAGCTGCTGT +
Preference number: 2 (lower is better)
Translates to: IWRWLRHEVKGEHIWDFHPFGAP*KTRSCC
Trigger: ACAGCAGCTCCGAGTCTTCCAAGGGGCCCCAAAGGG...ATGAAAGTCCCAAATGTGCTCACCTTTGACTTCATGTCGAAGCCATCTCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR TCA 90 bp TGTAGCACTTGTTGGTGTAGAGCAGCTCAGTGTACACGACGCAGGCCGGCTTGCTTCAGCGATGTTGGTTaGAATGATCACTTTGCGATA +
Preference number: 2 (lower is better)
Translates to: CSTCWCRAAQCTRRRPACFSDVG*NDHFAI
Trigger: TATCGCAAAGTGATCATTTCAACCAACATCGCTGAA...GCAAGCCGGCCTGCGTCGTGTACACTGAGCTGCTCTACACCAACAAGTGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR GCA 90 bp ACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTTTCCATGGAGTTGAGCAAAGATaGTTTCACGCTCCTGGAAGT +
Preference number: 2 (lower is better)
Translates to: THCTCVVRAPGIVLGTFHGVEQR*FHAPGS
Trigger: ACTTCCAGGAGCGTGAAAGCATCTTTGCTCAACTCC...ATGGAAAGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR-3UTR GCA 90 bp GGATCTCTGGCACGGTCATCTTATCAAACTTCTCAAACTCGTCCTCCGTGTAGATGTCTCGGCACGTCTTaGTCATGGCTTCGATCTCCT +
Preference number: 2 (lower is better)
Translates to: GSLARSSYQTSQTRPPCRCLGTS*SWLRSP
Trigger: AGGAGATCGAAGCCATGAGCAAGACGTGCCGAGACA...TCTACACGGAGGACGAGTTTGAGAAGTTTGATAAGATGACCGTGCCAGAGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR CCA 90 bp CTGTGCTCTGACTTCTGCTACCAGCGTCATATTCTTGCTGTTGACAAAATTCTCGCTTCCTGGTGGATCTaGAAGACGGAGACAAGCGCG +
Preference number: 2 (lower is better)
Translates to: LCSDFCYQRHILAVDKILASWWI*KTETSA
Trigger: CGCGCTTGTCTCCGTCTTCCAGATCCACCAGGAAGC...GAGAATTTTGTCAACAGCAAGAATATGACGCTGGTAGCAGAAGTCAGAGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR TCA 90 bp CCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAAGAGTTTCCAGGTACAAATaGTATGTCCATGTCTATATG +
Preference number: 2 (lower is better)
Translates to: PSSATSCGPSRKSPSVTRVSRYK*YVHVYM
Trigger: CATATAGACATGGACATATCATTTGTACCTGGAAAC...TCTTGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR-3UTR TCA 90 bp CTCCCAACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTGTTTCCAGGTACAAATaGTATGTCCATGTCTATATG +
Preference number: 2 (lower is better)
Translates to: LPTHCTCVVRAPGIVLGTVSRYK*YVHVYM
Trigger: CATATAGACATGGACATATCATTTGTACCTGGAAAC...AGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGTTGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR-3UTR GCA 90 bp GACCTGCTGTTTGCAGTCCTGCCCCTTGTAGTGTTACTCTGGGTGTTGCACACTGCAATCTGCTTGGAGTaGATCTATTTACATGAAGCT +
Preference number: 2 (lower is better)
Translates to: DLLFAVLPLVVLLWVLHTAICLE*IYLHEA
Trigger: AGCTTCATGTAAATAGATGCACTCCAAGCAGATTGC...AGTGTGCAACACCCAGAGTAACACTACAAGGGGCAGGACTGCAAACAGCAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR-3UTR CCA 90 bp GAGACACAAGCGTTCAGTAGGGATCGCCATCCCAGGAGGTACGAGATAACAGCAGTACTTCACATCATATaGCAAGCAGTAACATTCAGC +
Preference number: 2 (lower is better)
Translates to: ETQAFSRDRHPRRYEITAVLHII*QAVTFS
Trigger: GCTGAATGTTACTGCTTGCCATATGATGTGAAGTAC...TGCTGTTATCTCGTACCTCCTGGGATGGCGATCCCTACTGAACGCTTGTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR-3UTR CCA 90 bp CTAAGAGGAACCGTTAGTGCCTTTTCTCTGCTCAGAATATCAGAACAGGAACAGGAGACAGACACAGAGTaGTCCACCCTGAGACACAAG +
Preference number: 2 (lower is better)
Translates to: LRGTVSAFSLLRISEQEQETDTE*STLRHK
Trigger: CTTGTGTCTCAGGGTGGACCACTCTGTGTCTGTCTC...CTGTTCCTGTTCTGATATTCTGAGCAGAGAAAAGGCACTAACGGTTCCTCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR-3UTR TCA 90 bp TGTAAGCCCAGATGTGGTGTGGTATCTGGCATAAGCCAATGTTCTCTGGGTTCTCCGAAAAGAAACAGCTaGAATGGTACACAGTCACTC +
Preference number: 2 (lower is better)
Translates to: CKPRCGVVSGISQCSLGSPKRNS*NGTQSL
Trigger: GAGTGACTGTGTACCATTTCAGCTGTTTCTTTTCGG...AGAACCCAGAGAACATTGGCTTATGCCAGATACCACACCACATCTGGGCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR-3UTR GCA 90 bp TACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTTACGTGTGTCGTGCGTaGTCCAGGCATAGTTCTGGG +
Preference number: 2 (lower is better)
Translates to: YEITAPPSGNFYRSQFCFYVCRA*SRHSSG
Trigger: CCCAGAACTATGCCTGGAGCACGCACGACACACGTA...AAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR CAA 90 bp ATGTCCCTCAGCTGTGCTCTGACTTCTGCTACCAGCGTCATATTCTaGCTGTTGACAAAATTCTCTTTGCACCAATCCTTATTTCCGCCT +
Preference number: 2 (lower is better)
Translates to: MSLSCALTSATSVIF*LLTKFSLHQSLFPP
Trigger: AGGCGGAAATAAGGATTGGTGCAAAGAGAATTTTGTCAACAGCAAGAATATGACGCTGGTAGCAGAAGTCAGAGCACAGCTGAGGGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR GCA 90 bp GATCTCTGGCACGGTCATCTTATCAAACTTCTCAAACTCGTCCTCCGTGTAGAGAGGGTTATACTTCTTTaGTTTAACCATGCCCGTGTC +
Preference number: 2 (lower is better)
Translates to: DLWHGHLIKLLKLVLRVERVILL*FNHARV
Trigger: GACACGGGCATGGTTAAAGCAAAGAAGTATAACCCT...CTCTACACGGAGGACGAGTTTGAGAAGTTTGATAAGATGACCGTGCCAGAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR CCA 90 bp CTGTGCTCTGACTTCTGCTACCAGCGTCATATTCTTGCTGTTGACAAAATTCTCCGCCTGAATGTGATCTaGAGATGGCTTCGACATGAA +
Preference number: 2 (lower is better)
Translates to: LCSDFCYQRHILAVDKILRLNVI*RWLRHE
Trigger: TTCATGTCGAAGCCATCTCCAGATCACATTCAGGCG...GAGAATTTTGTCAACAGCAAGAATATGACGCTGGTAGCAGAAGTCAGAGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR CAA 90 bp AACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAAGAACTaGGGATATTGCTGTACTTCACATCATATGGCAAGCAGTAACATT +
Preference number: 2 (lower is better)
Translates to: NLLWPFQKISLSHKN*GYCCTSHHMASSNI
Trigger: AATGTTACTGCTTGCCATATGATGTGAAGTACAGCAATATCCCAAGTTCTTGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR CAA 90 bp CTCAGCTGTGCTCTGACTTCTGCTACCAGCGTCATATTCTTGCTGTaGACAAAATTCTCTTTGCACCAATCCTTATTTCCGCCTAGGTTT +
Preference number: 2 (lower is better)
Translates to: LSCALTSATSVIFLL*TKFSLHQSLFPPRF
Trigger: AAACCTAGGCGGAAATAAGGATTGGTGCAAAGAGAATTTTGTCAACAGCAAGAATATGACGCTGGTAGCAGAAGTCAGAGCACAGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR CCA 90 bp AGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGTACAATGCTTTCACGCTCCTaGAAGTCAGGCACCTTCAGC +
Preference number: 2 (lower is better)
Translates to: SQSHPVRTKSIILRFPGTMLSRS*KSGTFS
Trigger: GCTGAAGGTGCCTGACTTCCAGGAGCGTGAAAGCAT...TGTACCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR-3UTR CCA 90 bp CTTCCCATTGGAGTCAGGGTAAGCTGGTCATCCTTATGTTCAAGAGCACCTAACAATGTGATCTGGAGATaGCTTCGACATGAAGTCAAA +
Preference number: 2 (lower is better)
Translates to: LPIGVRVSWSSLCSRAPNNVIWR*LRHEVK
Trigger: TTTGACTTCATGTCGAAGCCATCTCCAGATCACATT...GTTAGGTGCTCTTGAACATAAGGATGACCAGCTTACCCTGACTCCAATGGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR GCA 90 bp AGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGTACAGCCAACCTGGAAGCCTaGTGTAAGGACAACTGTAGT +
Preference number: 2 (lower is better)
Translates to: SQSHPVRTKSIILRFPGTANLEA*CKDNCS
Trigger: ACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGC...TGTACCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR-3UTR GCA 90 bp ATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTCTATTTAAGAACTTGGGATATTaGTGTACTTCACATCATATG +
Preference number: 2 (lower is better)
Translates to: ITAPPSGNFYRSQFCFLFKNLGY*CTSHHM
Trigger: CATATGATGTGAAGTACAGCAATATCCCAAGTTCTT...AAATAGAAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR CCA 72 bp ACGGGTGGATGGCCACTGGCTGGTGGGTGTCCGTGGTaGCATAGGTGCCATCTGGCTGAAGCTCGGCGGTGC +
Preference number: 3 (lower is better)
Translates to: TGGWPLAGGCPW*HRCHLAEARRC
Trigger: GCACCGCCGAGCTTCAGCCAGATGGCACCTATGCCACCACGGACACCCACCAGCCAGTGGCCATCCACCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR CCA 72 bp ACGACGGGTGGATGGCCACTGGCTGGTGGGTGTCCGTaGTGGCATAGGTGCCATCTGGCTGAAGCTCGGCGG +
Preference number: 3 (lower is better)
Translates to: TTGGWPLAGGCP*WHRCHLAEARR
Trigger: CCGCCGAGCTTCAGCCAGATGGCACCTATGCCACCACGGACACCCACCAGCCAGTGGCCATCCACCCGTCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR CCA 72 bp CAGGCCGGCTTGCAGTGGAAGAGGACAGACGACGGGTaGATGGCCACTGGCTGGTGGGTGTCCGTGGTGGCA +
Preference number: 3 (lower is better)
Translates to: QAGLQWKRTDDG*MATGWWVSVVA
Trigger: TGCCACCACGGACACCCACCAGCCAGTGGCCATCCACCCGTCGTCTGTCCTCTTCCACTGCAAGCCGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR CCA 72 bp CCGGCTTGCAGTGGAAGAGGACAGACGACGGGTGGATaGCCACTGGCTGGTGGGTGTCCGTGGTGGCATAGG +
Preference number: 3 (lower is better)
Translates to: PACSGRGQTTGG*PLAGGCPWWHR
Trigger: CCTATGCCACCACGGACACCCACCAGCCAGTGGCCATCCACCCGTCGTCTGTCCTCTTCCACTGCAAGCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR GCA 72 bp GCCCTTTGGGGCCCCTTGGAAGACTCGGAGCTGCTGTaGATAGGGCAGGGAGGCGTACAGAGGAAGGACCAG +
Preference number: 3 (lower is better)
Translates to: ALWGPLEDSELL*IGQGGVQRKDQ
Trigger: CTGGTCCTTCCTCTGTACGCCTCCCTGCCCTATGCACAGCAGCTCCGAGTCTTCCAAGGGGCCCCAAAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR CCA 72 bp GCAGTGGAAGAGGACAGACGACGGGTGGATGGCCACTaGCTGGTGGGTGTCCGTGGTGGCATAGGTGCCATC +
Preference number: 3 (lower is better)
Translates to: AVEEDRRRVDGH*LVGVRGGIGAI
Trigger: GATGGCACCTATGCCACCACGGACACCCACCAGCCAGTGGCCATCCACCCGTCGTCTGTCCTCTTCCACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR CCA 72 bp AGCAGCTCAGTGTACACGACGCAGGCCGGCTTGCAGTaGAAGAGGACAGACGACGGGTGGATGGCCACTGGC +
Preference number: 3 (lower is better)
Translates to: SSSVYTTQAGLQ*KRTDDGWMATG
Trigger: GCCAGTGGCCATCCACCCGTCGTCTGTCCTCTTCCACTGCAAGCCGGCCTGCGTCGTGTACACTGAGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR CAA 90 bp GGTGTCCGTGGTGGCATAGGTGCCATCTGGCTGAAGCTCGGCGGTGCTCATGAACGCCGGGAAGGAGGGTaGTGGAGGACGCTGTCCACA +
Preference number: 3 (lower is better)
Translates to: GVRGGIGAIWLKLGGAHERREGG*WRTLST
Trigger: TGTGGACAGCGTCCTCCACAACCCTCCTTCCCGGCG...TTCATGAGCACCGCCGAGCTTCAGCCAGATGGCACCTATGCCACCACGGACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR CAA 90 bp CTGGCGGTTCTCAGCTTCCTCCTAAAGTACTCAGGGGCAGCCTCGTACAGCCACGCCCTTTGGGGCCCCTaGGAAGACTCGGAGCTGCTG +
Preference number: 3 (lower is better)
Translates to: LAVLSFLLKYSGAASYSHALWGP*EDSELL
Trigger: CAGCAGCTCCGAGTCTTCCAAGGGGCCCCAAAGGGC...GTGGCTGTACGAGGCTGCCCCTGAGTACTTTAGGAGGAAGCTGAGAACCGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR TCA 72 bp CATAGGTGCCATCTGGCTGAAGCTCGGCGGTGCTCATaGAGAGGCTGTGAGCCAGGCAGCGGCGGACACTCT +
Preference number: 3 (lower is better)
Translates to: HRCHLAEARRCS*RGCEPGSGGHS
Trigger: AGAGTGTCCGCCGCTGCCTGGCTCACAGCCTCTTCATGAGCACCGCCGAGCTTCAGCCAGATGGCACCTATG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR CCA 72 bp TGGCTGGTGGGTGTCCGTGGTGGCATAGGTGCCATCTaGCTGAAGCTCGGCGGTGCTCATGAAGAGGCTGTG +
Preference number: 3 (lower is better)
Translates to: WLVGVRGGIGAI*LKLGGAHEEAV
Trigger: CACAGCCTCTTCATGAGCACCGCCGAGCTTCAGCCAGATGGCACCTATGCCACCACGGACACCCACCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR CCA 72 bp CCAAGCTCCCAGGGACCAGTGATTCTGGCGGCATCCTaGGGCGGCTCAGTTTCTGGCGGTTCTCAGCTTCCT +
Preference number: 3 (lower is better)
Translates to: PSSQGPVILAAS*GGSVSGGSQLP
Trigger: AGGAAGCTGAGAACCGCCAGAAACTGAGCCGCCCCAGGATGCCGCCAGAATCACTGGTCCCTGGGAGCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR GCA 72 bp GGAAGGACCAGCATCGCAGGGCAGCCGTCTGGGAGGTaGTTTGCAATGTCTCGGCACGTCTTGCTCATGGCT +
Preference number: 3 (lower is better)
Translates to: GRTSIAGQPSGR*FAMSRHVLLMA
Trigger: AGCCATGAGCAAGACGTGCCGAGACATTGCAAAGCACCTCCCAGACGGCTGCCCTGCGATGCTGGTCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR GCA 72 bp TCCCCCTCGCTGGATATGAACTTCTTGCGGACCCCTTaGACTTCCTCTCGCCGGGAAGGAGGGTTGTGGAGG +
Preference number: 3 (lower is better)
Translates to: SPSLDMNFLRTP*TSSRREGGLWR
Trigger: CCTCCACAACCCTCCTTCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAGAAGTTCATATCCAGCGAGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR GCA 72 bp TGTAGAGCAGCTCAGTGTACACGACGCAGGCCGGCTTaGAGTGGAAGAGGACAGACGACGGGTGGATGGCCA +
Preference number: 3 (lower is better)
Translates to: CRAAQCTRRRPA*SGRGQTTGGWP
Trigger: TGGCCATCCACCCGTCGTCTGTCCTCTTCCACTGCAAGCCGGCCTGCGTCGTGTACACTGAGCTGCTCTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR CAA 90 bp GGTGTCCGTGGTGGCATAGGTGCCATCTGGCTGAAGCTCGGCGGTGCTCATGAACTTTGCGATAGCCCTTaGGGGCCCCTTGGAAGACTC +
Preference number: 3 (lower is better)
Translates to: GVRGGIGAIWLKLGGAHELCDSP*GPLGRL
Trigger: GAGTCTTCCAAGGGGCCCCAAAGGGCTATCGCAAAG...TTCATGAGCACCGCCGAGCTTCAGCCAGATGGCACCTATGCCACCACGGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR CCA 72 bp GTACAGAGGAAGGACCAGCATCGCAGGGCAGCCGTCTaGGAGGTGCTTTGCAATGTCTCGGCACGTCTTGCT +
Preference number: 3 (lower is better)
Translates to: VQRKDQHRRAAV*EVLCNVSARLA
Trigger: AGCAAGACGTGCCGAGACATTGCAAAGCACCTCCCAGACGGCTGCCCTGCGATGCTGGTCCTTCCTCTGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR CAA 90 bp CTGGCGGTTCTCAGCTTCCTCCTAAAGTACTCAGGGGCAGCCTCGTACAGCCACATGTCTCGGCACGTCTaGCTCATGGCTTCGATCTCC +
Preference number: 3 (lower is better)
Translates to: LAVLSFLLKYSGAASYSHMSRHV*LMASIS
Trigger: GGAGATCGAAGCCATGAGCAAGACGTGCCGAGACAT...GTGGCTGTACGAGGCTGCCCCTGAGTACTTTAGGAGGAAGCTGAGAACCGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR CAA 90 bp TGTAGCACTTGTTGGTGTAGAGCAGCTCAGTGTACACGACGCAGGCCGGCTTGCCGTCTGGGAGGTGCTTaGCAATGTCTCGGCACGTCT +
Preference number: 3 (lower is better)
Translates to: CSTCWCRAAQCTRRRPACRLGGA*QCLGTS
Trigger: AGACGTGCCGAGACATTGCAAAGCACCTCCCAGACG...GCAAGCCGGCCTGCGTCGTGTACACTGAGCTGCTCTACACCAACAAGTGCTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR TCA 72 bp GTAAGGACAACTGTAGTCCAAGCTCCCAGGGACCAGTaGTTCTGGCGGCATCCTGGGGCGGCTCAGTTTCTG +
Preference number: 3 (lower is better)
Translates to: VRTTVVQAPRDQ*FWRHPGAAQFL
Trigger: CAGAAACTGAGCCGCCCCAGGATGCCGCCAGAATCACTGGTCCCTGGGAGCTTGGACTACAGTTGTCCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR GCA 72 bp CCTGTGCGCTGCCAAGCCTGCGTCTTCGATACCCGCTaGACTGCTAACACCTCAAGACCACTGTCAGGGTTA +
Preference number: 3 (lower is better)
Translates to: PVRCQACVFDTR*TANTSRPLSGL
Trigger: TAACCCTGACAGTGGTCTTGAGGTGTTAGCAGTGCAGCGGGTATCGAAGACGCAGGCTTGGCAGCGCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR CCA 72 bp CAGGGTCACGCACTGAGGACCAGGAGGCTCCTTTACTaGTCTCTGCTTGGAGACAGACACAGAGTGGTCCAC +
Preference number: 3 (lower is better)
Translates to: QGHALRTRRLLY*SLLGDRHRVVH
Trigger: GTGGACCACTCTGTGTCTGTCTCCAAGCAGAGACCAGTAAAGGAGCCTCCTGGTCCTCAGTGCGTGACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR CCA 72 bp ACTGAGCCGGACTTGACATACACAACTCCGGACAGATaGGACCCTGGAATGGGGCTGCTCCATCAGGCCACA +
Preference number: 3 (lower is better)
Translates to: TEPDLTYTTPDR*DPGMGLLHQAT
Trigger: TGTGGCCTGATGGAGCAGCCCCATTCCAGGGTCCCATCTGTCCGGAGTTGTGTATGTCAAGTCCGGCTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR TCA 72 bp ACTCAGGGGCAGCCTCGTACAGCCACTGTGCATCTATaGCGCAGAGGTCCCGCATGTAGCACTTGTTGGTGT +
Preference number: 3 (lower is better)
Translates to: TQGQPRTATVHL*RRGPACSTCWC
Trigger: ACACCAACAAGTGCTACATGCGGGACCTCTGCGTCATAGATGCACAGTGGCTGTACGAGGCTGCCCCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR GCA 72 bp ACACAACTCCGGACAGATGGGACCCTGGAATGGGGCTaGTCCATCAGGCCACAGCTTCCAGAAAGAGAGCAT +
Preference number: 3 (lower is better)
Translates to: TQLRTDGTLEWG*SIRPQLPEREH
Trigger: ATGCTCTCTTTCTGGAAGCTGTGGCCTGATGGAGCAGCCCCATTCCAGGGTCCCATCTGTCCGGAGTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR-3UTR CAA 90 bp GGTGTCCGTGGTGGCATAGGTGCCATCTGGCTGAAGCTCGGCGGTGCTCATGAAGCAAAGAGTCTGAAATaGCTTCACGCAGAAGCATGC +
Preference number: 3 (lower is better)
Translates to: GVRGGIGAIWLKLGGAHEAKSLK*LHAEAC
Trigger: GCATGCTTCTGCGTGAAGCAATTTCAGACTCTTTGC...TTCATGAGCACCGCCGAGCTTCAGCCAGATGGCACCTATGCCACCACGGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR TCA 72 bp TCCATCAGGCCACAGCTTCCAGAAAGAGAGCATCCATaGTCTCTGAAGAGCCTCTTGGGCAGCTTGGCCCCT +
Preference number: 3 (lower is better)
Translates to: SIRPQLPEREHP*SLKSLLGSLAP
Trigger: AGGGGCCAAGCTGCCCAAGAGGCTCTTCAGAGATCATGGATGCTCTCTTTCTGGAAGCTGTGGCCTGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR GCA 72 bp CCTAAAGTACTCAGGGGCAGCCTCGTACAGCCACTGTaGATCTATGACGCAGAGGTCCCGCATGTAGCACTT +
Preference number: 3 (lower is better)
Translates to: PKVLRGSLVQPL*IYDAEVPHVAL
Trigger: AAGTGCTACATGCGGGACCTCTGCGTCATAGATGCACAGTGGCTGTACGAGGCTGCCCCTGAGTACTTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR CCA 72 bp CAAGCGCGGCGTGCAGGTAATCATTCTGAGGCTGTTTaGTGTAAAACACCTGGATCGGATGCTGCCGACCCT +
Preference number: 3 (lower is better)
Translates to: QARRAGNHSEAV*CKTPGSDAADP
Trigger: AGGGTCGGCAGCATCCGATCCAGGTGTTTTACACCAAACAGCCTCAGAATGATTACCTGCACGCCGCGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR TCA 72 bp TACATGTCTCCTGAAAGCACTGACAGGGTCACGCACTaGGGACCAGGAGGCTCCTTTACTGGTCTCTGCTTG +
Preference number: 3 (lower is better)
Translates to: YMSPESTDRVTH*GPGGSFTGLCL
Trigger: CAAGCAGAGACCAGTAAAGGAGCCTCCTGGTCCTCAGTGCGTGACCCTGTCAGTGCTTTCAGGAGACATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR GCA 72 bp GATTCCAAGGCTTCTCTAAGCGCCAACCTGGAAGCCTaGTGTAAGGACAACTGTAGTCCAAGCTCCCAGGGA +
Preference number: 3 (lower is better)
Translates to: DSKASLSANLEA*CKDNCSPSSQG
Trigger: TCCCTGGGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGCGCTTAGAGAAGCCTTGGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
ENST00000574023.1
3UTR GCA 72 bp CTACAAACTCTGCCTCCCAAGTTCAAGCAATTCTTGTaGCTCAGCCTCCCCGGTAGCTGGGATTACAGGCGT +
Preference number: 3 (lower is better)
Translates to: LQTLPPKFKQFL*LSLPGSWDYRR
Trigger: ACGCCTGTAATCCCAGCTACCGGGGAGGCTGAGGCACAAGAATTGCTTGAACTTGGGAGGCAGAGTTTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR GCA 72 bp CTAACGGCTCCCAACTCACTGTACGTGTGTCGTGCGTaGTCCAGGCATAGTTCTGGGTACTTTCCATTCCTT +
Preference number: 3 (lower is better)
Translates to: LTAPNSLYVCRA*SRHSSGYFPFL
Trigger: AAGGAATGGAAAGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGTTGGGAGCCGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR CCA 72 bp GAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTaGCCCTTCCAGAAAATCTCCCTCAGTCACAAGAAC +
Preference number: 3 (lower is better)
Translates to: ELRATSKLRNLL*PFQKISLSHKN
Trigger: GTTCTTGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR-3UTR CAA 90 bp TCAGTGTACACGACGCAGGCCGGCTTGCAGTGGAAGAGGACAGACGACGGGTGGATGGTTTTGGCAAATTaGGGTTCTAAAGGAAATGCT +
Preference number: 3 (lower is better)
Translates to: SVYTTQAGLQWKRTDDGWMVLAN*GSKGNA
Trigger: AGCATTTCCTTTAGAACCCAAATTTGCCAAAACCAT...CCACCCGTCGTCTGTCCTCTTCCACTGCAAGCCGGCCTGCGTCGTGTACACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR-3UTR CAA 90 bp TGTACACGACGCAGGCCGGCTTGCAGTGGAAGAGGACAGACGACGGGTGGATGGTTGACAAAATTCTCTTaGCACCAATCCTTATTTCCG +
Preference number: 3 (lower is better)
Translates to: CTRRRPACSGRGQTTGGWLTKFS*HQSLFP
Trigger: CGGAAATAAGGATTGGTGCAAAGAGAATTTTGTCAA...CCATCCACCCGTCGTCTGTCCTCTTCCACTGCAAGCCGGCCTGCGTCGTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR TCA 72 bp CTGCACAGGACCACGGCTAGTGTTGGAAATAAAGACTaGGCCGGACTTGACATACACAACTCCGGACAGATG +
Preference number: 3 (lower is better)
Translates to: LHRTTASVGNKD*AGLDIHNSGQM
Trigger: CATCTGTCCGGAGTTGTGTATGTCAAGTCCGGCTCAGTCTTTATTTCCAACACTAGCCGTGGTCCTGTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR GCA 72 bp GAATGCAGTGGCGTGATCTTGGCTCACTACAAACTCTaGCTCCCAAGTTCAAGCAATTCTTGTGCCTCAGCC +
Preference number: 3 (lower is better)
Translates to: ECSGVILAHYKL*LPSSSNSCASA
Trigger: GGCTGAGGCACAAGAATTGCTTGAACTTGGGAGGCAGAGTTTGTAGTGAGCCAAGATCACGCCACTGCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR CCA 72 bp TATGTTCAAGAGCACCTAACAGGTCCAGTTGGGCAATaGCCGCCTGAATGTGATCTGGAGATGGCTTCGACA +
Preference number: 3 (lower is better)
Translates to: YVQEHLTGPVGQ*PPECDLEMAST
Trigger: TGTCGAAGCCATCTCCAGATCACATTCAGGCGGCCATTGCCCAACTGGACCTGTTAGGTGCTCTTGAACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR GCA 72 bp TGTCTATATGGTTCAGTCCCAGGAGTTGAGCAAAGATaGTTTCACGCTCCTGGAAGTCAGGCACCTTCAGCT +
Preference number: 3 (lower is better)
Translates to: CLYGSVPGVEQR*FHAPGSQAPSA
Trigger: AGCTGAAGGTGCCTGACTTCCAGGAGCGTGAAAGCATCTTTGCTCAACTCCTGGGACTGAACCATATAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR GCA 72 bp GAAGACAAACACCTGAGGCATGCAATCTGCTTGGAGTaGATCTATTTACATGAAGCTGCTCACGGGAGCTGG +
Preference number: 3 (lower is better)
Translates to: EDKHLRHAICLE*IYLHEAAHGSW
Trigger: CCAGCTCCCGTGAGCAGCTTCATGTAAATAGATGCACTCCAAGCAGATTGCATGCCTCAGGTGTTTGTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR CCA 72 bp GCTGCCATCTTTCTTCCCATTGGAGTCAGGGTAAGCTaGTCATCCTTATGTTCAAGAGCACCTAACAGGTCC +
Preference number: 3 (lower is better)
Translates to: AAIFLPIGVRVS*SSLCSRAPNRS
Trigger: GGACCTGTTAGGTGCTCTTGAACATAAGGATGACCAGCTTACCCTGACTCCAATGGGAAGAAAGATGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR GCA 72 bp GTACACAGTCACTCCTCATGCCCGCATGTTCACTGGTaGCCAGTTAGAGAGAAAAATGGCAACTGTGTATGT +
Preference number: 3 (lower is better)
Translates to: VHSHSSCPHVHW*PVREKNGNCVC
Trigger: ACATACACAGTTGCCATTTTTCTCTCTAACTGGGCACCAGTGAACATGCGGGCATGAGGAGTGACTGTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR GCA 72 bp CTCCAATTCCCTCTGACAATGAGGGTTAGAGAGAGGTaGCTAGCAGTTAGAAAGCAGCAAAGCCAGATTGTC +
Preference number: 3 (lower is better)
Translates to: LQFPLTMRVRER*LAVRKQQSQIV
Trigger: GACAATCTGGCTTTGCTGCTTTCTAACTGCTAGGCACCTCTCTCTAACCCTCATTGTCAGAGGGAATTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR-3UTR CAA 90 bp GAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCCAAGAACTTGGGATATaGCTGTACTTCACATCATAT +
Preference number: 3 (lower is better)
Translates to: ELRATSKLRNLLWPFQKIQELGI*LYFTSY
Trigger: ATATGATGTGAAGTACAGCAATATCCCAAGTTCTTG...GATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR-3UTR CAA 90 bp CAAGAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAACAAGAACTTGGGATATaGCTGTACTTCACATCATAT +
Preference number: 3 (lower is better)
Translates to: QELRATSKLRNLLWPFQKQELGI*LYFTSY
Trigger: ATATGATGTGAAGTACAGCAATATCCCAAGTTCTTG...TTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR TCA 72 bp CCCCTTGTAGTGTTACTCTGGGTGTTGCACACTCCATaGTTACTAGAAGACAAACACCTGAGGCATGCAATC +
Preference number: 3 (lower is better)
Translates to: PLVVLLWVLHTP*LLEDKHLRHAI
Trigger: GATTGCATGCCTCAGGTGTTTGTCTTCTAGTAATCATGGAGTGTGCAACACCCAGAGTAACACTACAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR TCA 72 bp GAAATACTGAGAGAACAGGTCCACATCCATCGTAGCTaGCATCACAATCACTTTCAGAGGAAGTTTCCCGAG +
Preference number: 3 (lower is better)
Translates to: EILREQVHIHRS*HHNHFQRKFPE
Trigger: CTCGGGAAACTTCCTCTGAAAGTGATTGTGATGTCAGCTACGATGGATGTGGACCTGTTCTCTCAGTATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR TCA 72 bp CAAAACACTGATAGGTCAGTTTCCCATGTCTACACGTaGCAGGATTCAGAAGGTACAAATCAACCTTCACCC +
Preference number: 3 (lower is better)
Translates to: QNTDRSVSHVYT*QDSEGTNQPSP
Trigger: GGGTGAAGGTTGATTTGTACCTTCTGAATCCTGTCACGTGTAGACATGGGAAACTGACCTATCAGTGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR TCA 72 bp CAAAATGACACAGCTGTATTTCCGAAGCAAAGAGTCTaGAATTGCTTCACGCAGAAGCATGCCATCTGTCAG +
Preference number: 3 (lower is better)
Translates to: QNDTAVFPKQRV*NCFTQKHAICQ
Trigger: CTGACAGATGGCATGCTTCTGCGTGAAGCAATTTCAGACTCTTTGCTTCGGAAATACAGCTGTGTCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR CCA 72 bp GAGCTGGTGATTCTTCCAGATATGGGTTTCGTAGGTTaGCAAAGAGTTATCACACCATCAGAGATTTTACCA +
Preference number: 3 (lower is better)
Translates to: ELVILPDMGFVG*QRVITPSEILP
Trigger: TGGTAAAATCTCTGATGGTGTGATAACTCTTTGCCAACCTACGAAACCCATATCTGGAAGAATCACCAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR GCA 72 bp CAGAAAATCTCCCTCAGTCACAAGAACTTGGGATATTaGTGTACTTCACATCATATGGCAAGCAGTAACATT +
Preference number: 3 (lower is better)
Translates to: QKISLSHKNLGY*CTSHHMASSNI
Trigger: AATGTTACTGCTTGCCATATGATGTGAAGTACAGCAATATCCCAAGTTCTTGTGACTGAGGGAGATTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp CAGGGAGGCGTACAGAGGAAGGACCAGCATCGCAGGGCAGCCGTCTGGGAGGTGCTCCTCTGCCGCCGCTaGCCGCAGTCAGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: QGGVQRKDQHRRAAVWEVLLCRR*PQSAAS
Trigger: TGATGCTGCTGACTGCGGGCAGCGGCGGCAGAGGAG...CACCTCCCAGACGGCTGCCCTGCGATGCTGGTCCTTCCTCTGTACGCCTCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR GCA 90 bp CAGGGAGGCGTACAGAGGAAGGACCAGCATCGCAGGGCAGCCGTCTGGGAGGTGGGCAGACTCCGGCGCTaGAGCTCCACAGCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: QGGVQRKDQHRRAAVWEVGRLRR*SSTASG
Trigger: CCCTGAAGCTGTGGAGCTGCAGCGCCGGAGTCTGCC...CACCTCCCAGACGGCTGCCCTGCGATGCTGGTCCTTCCTCTGTACGCCTCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp GGAAGAGGACAGACGACGGGTGGATGGCCACTGGCTGGTGGGTGTCCGTGGTGGGCTGGTGGGTGTCCGTaGTGGCATAGGTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: GRGQTTGGWPLAGGCPWWAGGCP*WHRCHL
Trigger: CAGATGGCACCTATGCCACCACGGACACCCACCAGC...CCACCACGGACACCCACCAGCCAGTGGCCATCCACCCGTCGTCTGTCCTCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp TCCTCTCGCCGGGAAGGAGGGTTGTGGAGGACGCTGTCCACAGACAGCAGGGAGCAGACGACGGGTGGATaGCCACTGGCTGGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: SSRREGGLWRTLSTDSREQTTGG*PLAGGC
Trigger: ACACCCACCAGCCAGTGGCCATCCACCCGTCGTCTG...CTCCCTGCTGTCTGTGGACAGCGTCCTCCACAACCCTCCTTCCCGGCGAGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp CTTCTTGCGGACCCCTTGCACTTCCTCTCGCCGGGAAGGAGGGTTGTGGAGGACAGTTGCCCCCGCGCTTaGAAGATGGGCAGACTCCGG +
Preference number: 4 (lower is better)
Translates to: LLADPLHFLSPGRRVVEDSCPRA*KMGRLR
Trigger: CCGGAGTCTGCCCATCTTCCAAGCGCGGGGGCAACT...GTCCTCCACAACCCTCCTTCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp CTTGCGGACCCCTTGCACTTCCTCTCGCCGGGAAGGAGGGTTGTGGAGGACGCTGGCATAGGTGCCATCTaGCTGAAGCTCGGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: LADPLHFLSPGRRVVEDAGIGAI*LKLGGA
Trigger: AGCACCGCCGAGCTTCAGCCAGATGGCACCTATGCC...AGCGTCCTCCACAACCCTCCTTCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR TCA 90 bp TCCCTGTGCGCTGCCAAGCCTGCGTCTTCGATACCCGCTGCACTGCTAACACCTCTCATGAAGAGGCTGTaGGCCAGGCAGCGGCGGACA +
Preference number: 4 (lower is better)
Translates to: SLCAAKPASSIPAALLTPLMKRL*ARQRRT
Trigger: TGTCCGCCGCTGCCTGGCTCACAGCCTCTTCATGAG...AGGTGTTAGCAGTGCAGCGGGTATCGAAGACGCAGGCTTGGCAGCGCACAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp GAGTGGTCCACCCTGAGACACAAGCGTTCAGTAGGGATCGCCATCCCAGGAGGTCCCGCGCTTGGAAGATaGGCAGACTCCGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: EWSTLRHKRSVGIAIPGGPALGR*ADSGAA
Trigger: TGCAGCGCCGGAGTCTGCCCATCTTCCAAGCGCGGG...ACCTCCTGGGATGGCGATCCCTACTGAACGCTTGTGTCTCAGGGTGGACCACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp CTTGCGGACCCCTTGCACTTCCTCTCGCCGGGAAGGAGGGTTGTGGAGGACGCTTTGAGCAGGGTCATGTaGTCCCCCTCGCTGGATATG +
Preference number: 4 (lower is better)
Translates to: LADPLHFLSPGRRVVEDALSRVM*SPSLDM
Trigger: CATATCCAGCGAGGGGGATCACATGACCCTGCTCAA...AGCGTCCTCCACAACCCTCCTTCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR GCA 90 bp CTTGCAGTGGAAGAGGACAGACGACGGGTGGATGGCCACTGGCTGGTGGGTGTCCAGCCGTCTGGGAGGTaGTTTGCAATGTCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: LAVEEDRRRVDGHWLVGVQPSGR*FAMSRH
Trigger: GTGCCGAGACATTGCAAAGCACCTCCCAGACGGCTG...GACACCCACCAGCCAGTGGCCATCCACCCGTCGTCTGTCCTCTTCCACTGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR GCA 90 bp GAGTGGTCCACCCTGAGACACAAGCGTTCAGTAGGGATCGCCATCCCAGGAGGTCGACGCAGGCCGGCTTaGAGTGGAAGAGGACAGACG +
Preference number: 4 (lower is better)
Translates to: EWSTLRHKRSVGIAIPGGRRRPA*SGRGQT
Trigger: CGTCTGTCCTCTTCCACTGCAAGCCGGCCTGCGTCG...ACCTCCTGGGATGGCGATCCCTACTGAACGCTTGTGTCTCAGGGTGGACCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp GAGTGGTCCACCCTGAGACACAAGCGTTCAGTAGGGATCGCCATCCCAGGAGGTTCCAGGTTTCGGAGCTaGGCCAACAGTTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: EWSTLRHKRSVGIAIPGGSRFRS*ANSCPR
Trigger: GCGGGGGCAACTGTTGGCCCAGCTCCGAAACCTGGA...ACCTCCTGGGATGGCGATCCCTACTGAACGCTTGTGTCTCAGGGTGGACCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp GAGTGGTCCACCCTGAGACACAAGCGTTCAGTAGGGATCGCCATCCCAGGAGGTCAGACGACGGGTGGATaGCCACTGGCTGGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: EWSTLRHKRSVGIAIPGGQTTGG*PLAGGC
Trigger: ACACCCACCAGCCAGTGGCCATCCACCCGTCGTCTG...ACCTCCTGGGATGGCGATCCCTACTGAACGCTTGTGTCTCAGGGTGGACCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp GAGTGGTCCACCCTGAGACACAAGCGTTCAGTAGGGATCGCCATCCCAGGAGGTCAGGCCGGCTTGCAGTaGAAGAGGACAGACGACGGG +
Preference number: 4 (lower is better)
Translates to: EWSTLRHKRSVGIAIPGGQAGLQ*KRTDDG
Trigger: CCCGTCGTCTGTCCTCTTCCACTGCAAGCCGGCCTG...ACCTCCTGGGATGGCGATCCCTACTGAACGCTTGTGTCTCAGGGTGGACCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp TGTACACGACGCAGGCCGGCTTGCAGTGGAAGAGGACAGACGACGGGTGGATGGGGACGGGGGCGCCATTaGAATACTGAGAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: CTRRRPACSGRGQTTGGWGRGRH*NTERTG
Trigger: ACCTGTTCTCTCAGTATTTCAATGGCGCCCCCGTCC...CCATCCACCCGTCGTCTGTCCTCTTCCACTGCAAGCCGGCCTGCGTCGTGTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR TCA 90 bp GGTGTCCGTGGTGGCATAGGTGCCATCTGGCTGAAGCTCGGCGGTGCTCATGAACCCCCTCGCTGGATATaGACTTCTTGCGGACCCCTT +
Preference number: 4 (lower is better)
Translates to: GVRGGIGAIWLKLGGAHEPPRWI*TSCGPL
Trigger: AAGGGGTCCGCAAGAAGTTCATATCCAGCGAGGGGG...TTCATGAGCACCGCCGAGCTTCAGCCAGATGGCACCTATGCCACCACGGACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR TCA 90 bp CAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCGCTCCCAGGGACCAGTaGTTCTGGCGGCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: QHPSSATSCGPSRKSPSVAPRDQ*FWRHPG
Trigger: CCCAGGATGCCGCCAGAATCACTGGTCCCTGGGAGC...GACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp GAGACACAAGCGTTCAGTAGGGATCGCCATCCCAGGAGGTACGAGATAACAGCACTGGCCGGAATCTCTTaGCCGGCGGGAAGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: ETQAFSRDRHPRRYEITALAGIS*PAGSPP
Trigger: AGGCGGGCTTCCCGCCGGCCAAGAGATTCCGGCCAG...TGCTGTTATCTCGTACCTCCTGGGATGGCGATCCCTACTGAACGCTTGTGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000433302.7
CDS-3UTR CCA 90 bp TCCAGAAAGAGAGCATCCATGATCTCTGAAGAGCCTCTTGGGCAGCTTGGCCCCCGGAGGTCCAGAGCCTaGCCGGAATCTCTTGGCCGG +
Preference number: 4 (lower is better)
Translates to: SRKRASMISEEPLGQLGPRRSRA*PESLGR
Trigger: CCGGCCAAGAGATTCCGGCCAGGCTCTGGACCTCCG...GGGGCCAAGCTGCCCAAGAGGCTCTTCAGAGATCATGGATGCTCTCTTTCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp CTTTGGGGCCCCTTGGAAGACTCGGAGCTGCTGTGCATAGGGCAGGGAGGCGTAGCCAGGTTACACCTCTaGATCTCTGGCACGGTCATC +
Preference number: 4 (lower is better)
Translates to: LWGPLEDSELLCIGQGGVARLHL*ISGTVI
Trigger: GATGACCGTGCCAGAGATCCAGAGGTGTAACCTGGC...TACGCCTCCCTGCCCTATGCACAGCAGCTCCGAGTCTTCCAAGGGGCCCCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp CAGGGAGGCGTACAGAGGAAGGACCAGCATCGCAGGGCAGCCGTCTGGGAGGTGACAGCAGGGAGACAATaGTCAGGATCTCCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: QGGVQRKDQHRRAAVWEVTAGRQ*SGSPLY
Trigger: GTACAGAGGAGATCCTGACCATTGTCTCCCTGCTGT...CACCTCCCAGACGGCTGCCCTGCGATGCTGGTCCTTCCTCTGTACGCCTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp TGTAGCACTTGTTGGTGTAGAGCAGCTCAGTGTACACGACGCAGGCCGGCTTGCTGGATGGCCACTGGCTaGTGGGTGTCCGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: CSTCWCRAAQCTRRRPACWMATG*WVSVVA
Trigger: TGCCACCACGGACACCCACCAGCCAGTGGCCATCCA...GCAAGCCGGCCTGCGTCGTGTACACTGAGCTGCTCTACACCAACAAGTGCTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp CTCCCAACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTCGGGTGGATGGCCACTaGCTGGTGGGTGTCCGTGGT +
Preference number: 4 (lower is better)
Translates to: LPTHCTCVVRAPGIVLGTRVDGH*LVGVRG
Trigger: ACCACGGACACCCACCAGCCAGTGGCCATCCACCCG...AGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGTTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp CTGGCGGTTCTCAGCTTCCTCCTAAAGTACTCAGGGGCAGCCTCGTACAGCCACGGGCGGCTCAGTTTCTaGCGGTTCTCAGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LAVLSFLLKYSGAASYSHGRLSF*RFSASS
Trigger: GGAGGAAGCTGAGAACCGCCAGAAACTGAGCCGCCC...GTGGCTGTACGAGGCTGCCCCTGAGTACTTTAGGAGGAAGCTGAGAACCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR CAA 72 bp CCGTCTGGGAGGTGCTTTGCAATGTCTCGGCACGTCTaGCTCATGGCTTCGATCTCCTCCTGCCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: PSGRCFAMSRHV*LMASISSCPVR
Trigger: CCTCACTGGGCAGGAGGAGATCGAAGCCATGAGCAAGACGTGCCGAGACATTGCAAAGCACCTCCCAGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
3UTR CAA 72 bp ATCCCCCTCGCTGGATATGAACTTCTTGCGGACCCCTaGCACTTCCTCTCGCCGGGAAGGAGGGTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: IPLAGYELLADP*HFLSPGRRVVE
Trigger: CTCCACAACCCTCCTTCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAGAAGTTCATATCCAGCGAGGGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR TCA 90 bp CATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACACTCATGAAGAGGCTGTaGGCCAGGCAGCGGCGGACA +
Preference number: 4 (lower is better)
Translates to: HPSSATSCGPSRKSPSVTLMKRL*ARQRRT
Trigger: TGTCCGCCGCTGCCTGGCTCACAGCCTCTTCATGAG...TGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp CAGCTTCCTCCTAAAGTACTCAGGGGCAGCCTCGTACAGCCACTGTGCATCTATGCTCGGCGGTGCTCATaGAGAGGCTGTGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QLPPKVLRGSLVQPLCIYARRCS*RGCEPG
Trigger: GCCTGGCTCACAGCCTCTTCATGAGCACCGCCGAGC...ATAGATGCACAGTGGCTGTACGAGGCTGCCCCTGAGTACTTTAGGAGGAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR TCA 90 bp GAGTGGTCCACCCTGAGACACAAGCGTTCAGTAGGGATCGCCATCCCAGGAGGTGCCACTGTGCATCTATaGCGCAGAGGTCCCGCATGT +
Preference number: 4 (lower is better)
Translates to: EWSTLRHKRSVGIAIPGGATVHL*RRGPAC
Trigger: ACATGCGGGACCTCTGCGTCATAGATGCACAGTGGC...ACCTCCTGGGATGGCGATCCCTACTGAACGCTTGTGTCTCAGGGTGGACCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp GAGACACAAGCGTTCAGTAGGGATCGCCATCCCAGGAGGTACGAGATAACAGCAAGCGCCGAGAGCTCCTaGCCCCTCTCAGGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: ETQAFSRDRHPRRYEITASAESS*PLSGAD
Trigger: GTCTGCACCTGAGAGGGGGCAGGAGCTCTCGGCGCT...TGCTGTTATCTCGTACCTCCTGGGATGGCGATCCCTACTGAACGCTTGTGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR GCA 90 bp GACCTGCTGTTTGCAGTCCTGCCCCTTGTAGTGTTACTCTGGGTGTTGCACACTGGCAGACTCCGGCGCTaGAGCTCCACAGCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: DLLFAVLPLVVLLWVLHTGRLRR*SSTASG
Trigger: CCCTGAAGCTGTGGAGCTGCAGCGCCGGAGTCTGCC...AGTGTGCAACACCCAGAGTAACACTACAAGGGGCAGGACTGCAAACAGCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR GCA 90 bp CTGGAAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCCAGGGACCAGTGATTGGCAGACTCCGGCGCTaGAGCTCCACAGCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LEACCKDNCSPSSQGPVIGRLRR*SSTASG
Trigger: CCCTGAAGCTGTGGAGCTGCAGCGCCGGAGTCTGCC...AATCACTGGTCCCTGGGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
ENST00000574023.1
CDS-3UTR GCA 90 bp GAGTGGTCCACCCTGAGACACAAGCGTTCAGTAGGGATCGCCATCCCAGGAGGTCAGCCGTCTGGGAGGTaGTTTGCAATGTCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: EWSTLRHKRSVGIAIPGGQPSGR*FAMSRH
Trigger: GTGCCGAGACATTGCAAAGCACCTCCCAGACGGCTG...ACCTCCTGGGATGGCGATCCCTACTGAACGCTTGTGTCTCAGGGTGGACCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp CTCCCAACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTGTGCGCTGCCAAGCCTaGGTCTTCGATACCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LPTHCTCVVRAPGIVLGTVRCQA*VFDTRC
Trigger: GCAGCGGGTATCGAAGACGCAGGCTTGGCAGCGCAC...AGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGTTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp AAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTGTGCGCTGCCAAGCCTaGGTCTTCGATACCCGCTGC +
Preference number: 4 (lower is better)
Translates to: KGNIQAPQPPVALPENLPVRCQA*VFDTRC
Trigger: GCAGCGGGTATCGAAGACGCAGGCTTGGCAGCGCAC...AGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTTTCCATCTGGCCGGAATCTCTTaGCCGGCGGGAAGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: THCTCVVRAPGIVLGTFHLAGIS*PAGSPP
Trigger: AGGCGGGCTTCCCGCCGGCCAAGAGATTCCGGCCAG...ATGGAAAGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000433302.7
CDS-3UTR CCA 90 bp CATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAAGTTGCCCCCGCGCTTaGAAGATGGGCAGACTCCGG +
Preference number: 4 (lower is better)
Translates to: HPSSATSCGPSRKSPSVTSCPRA*KMGRLR
Trigger: CCGGAGTCTGCCCATCTTCCAAGCGCGGGGGCAACT...TGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp TGTTGGTGTAGAGCAGCTCAGTGTACACGACGCAGGCCGGCTTGCAGTGGAAGAGGTGGGTGTCCGTGGTaGCATAGGTGCCATCTGGCT +
Preference number: 4 (lower is better)
Translates to: CWCRAAQCTRRRPACSGRGGCPW*HRCHLA
Trigger: AGCCAGATGGCACCTATGCCACCACGGACACCCACC...TCTTCCACTGCAAGCCGGCCTGCGTCGTGTACACTGAGCTGCTCTACACCAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp GAGACACAAGCGTTCAGTAGGGATCGCCATCCCAGGAGGTACGAGATAACAGCACGGGTGGATGGCCACTaGCTGGTGGGTGTCCGTGGT +
Preference number: 4 (lower is better)
Translates to: ETQAFSRDRHPRRYEITARVDGH*LVGVRG
Trigger: ACCACGGACACCCACCAGCCAGTGGCCATCCACCCG...TGCTGTTATCTCGTACCTCCTGGGATGGCGATCCCTACTGAACGCTTGTGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp GTTCTCAGCTTCCTCCTAAAGTACTCAGGGGCAGCCTCGTACAGCCACTGTGCACAGGCCGGCTTGCAGTaGAAGAGGACAGACGACGGG +
Preference number: 4 (lower is better)
Translates to: VLSFLLKYSGAASYSHCAQAGLQ*KRTDDG
Trigger: CCCGTCGTCTGTCCTCTTCCACTGCAAGCCGGCCTG...TGCACAGTGGCTGTACGAGGCTGCCCCTGAGTACTTTAGGAGGAAGCTGAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR TCA 90 bp CAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCAGCCAGTTTCCCCGATaGGGACCGCGTTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QHPSSATSCGPSRKSPSVSQFPR*GPRCPG
Trigger: ACCTGGACAACGCGGTCCTCATCGGGGAAACTGGCT...GACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR TCA 90 bp CTTGCAGTGGAAGAGGACAGACGACGGGTGGATGGCCACTGGCTGGTGGGTGTCAGGTCCGATAGATATTaGGCAGGGTCATGTGATCCC +
Preference number: 4 (lower is better)
Translates to: LAVEEDRRRVDGHWLVGVRSDRY*AGSCDP
Trigger: GGGATCACATGACCCTGCTCAATATCTATCGGACCT...GACACCCACCAGCCAGTGGCCATCCACCCGTCGTCTGTCCTCTTCCACTGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR GCA 90 bp CAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCCTGCCCCCTCTCAGGTaGAGACAACAGGAGCACACC +
Preference number: 4 (lower is better)
Translates to: QHPSSATSCGPSRKSPSVLPPLR*RQQEHT
Trigger: GGTGTGCTCCTGTTGTCTGCACCTGAGAGGGGGCAG...GACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR GCA 90 bp GAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCGTGCGCTGCCAAGCCTaGGTCTTCGATACCCGCTGC +
Preference number: 4 (lower is better)
Translates to: ELRATSKLRNLLWPFQKIVRCQA*VFDTRC
Trigger: GCAGCGGGTATCGAAGACGCAGGCTTGGCAGCGCAC...GATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp ACAAGAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAGCCCTCCCTGTGCGCTaGCAAGCCTGCGTCTTCGAT +
Preference number: 4 (lower is better)
Translates to: TRTKGNIQAPQPPVALPEALPVR*QACVFD
Trigger: ATCGAAGACGCAGGCTTGGCAGCGCACAGGGAGGGC...TTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp TGTTGGTGTAGAGCAGCTCAGTGTACACGACGCAGGCCGGCTTGCAGTGGAAGAAGAGCCGGTAGCAGATaGCACTGTCCTCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: CWCRAAQCTRRRPACSGRRAGSR*HCPLCQ
Trigger: CTGGCAGAGAGGACAGTGGCATCTGCTACCGGCTCT...TCTTCCACTGCAAGCCGGCCTGCGTCGTGTACACTGAGCTGCTCTACACCAACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR GCA 90 bp AGCAGTAACATTCAGCCTAACGGCTCCCAACTCACTGTACGTGTGTCGTGCGTGCGACGCAGGCCGGCTTaGAGTGGAAGAGGACAGACG +
Preference number: 4 (lower is better)
Translates to: SSNIQPNGSQLTVRVSCVRRRPA*SGRGQT
Trigger: CGTCTGTCCTCTTCCACTGCAAGCCGGCCTGCGTCG...CACGCACGACACACGTACAGTGAGTTGGGAGCCGTTAGGCTGAATGTTACTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp GAGTGGTCCACCCTGAGACACAAGCGTTCAGTAGGGATCGCCATCCCAGGAGGTCCAGGACCTGCTGTTTaGAGTCCTGCCCCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: EWSTLRHKRSVGIAIPGGPGPAV*SPAPCS
Trigger: ACTACAAGGGGCAGGACTGCAAACAGCAGGTCCTGG...ACCTCCTGGGATGGCGATCCCTACTGAACGCTTGTGTCTCAGGGTGGACCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp GAGACACAAGCGTTCAGTAGGGATCGCCATCCCAGGAGGTACGAGATAACAGCATCCAGGTTTCGGAGCTaGGCCAACAGTTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: ETQAFSRDRHPRRYEITASRFRS*ANSCPR
Trigger: GCGGGGGCAACTGTTGGCCCAGCTCCGAAACCTGGA...TGCTGTTATCTCGTACCTCCTGGGATGGCGATCCCTACTGAACGCTTGTGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp GAGTGGTCCACCCTGAGACACAAGCGTTCAGTAGGGATCGCCATCCCAGGAGGTGAAGGGGCTTCCTGGTaGATCTGGAAGACGGAGACA +
Preference number: 4 (lower is better)
Translates to: EWSTLRHKRSVGIAIPGGEGASW*IWKTET
Trigger: TGTCTCCGTCTTCCAGATCCACCAGGAAGCCCCTTC...ACCTCCTGGGATGGCGATCCCTACTGAACGCTTGTGTCTCAGGGTGGACCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR CCA 90 bp CTCCCAACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTCGCAGGGCAGCCGTCTaGGAGGTGCTTTGCAATGTC +
Preference number: 4 (lower is better)
Translates to: LPTHCTCVVRAPGIVLGTRRAAV*EVLCNV
Trigger: GACATTGCAAAGCACCTCCCAGACGGCTGCCCTGCG...AGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGTTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp CATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACACCCTTTGGGGCCCCTTaGAAGACTCGGAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: HPSSATSCGPSRKSPSVTPFGAP*KTRSCC
Trigger: ACAGCAGCTCCGAGTCTTCCAAGGGGCCCCAAAGGG...TGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR CCA 90 bp GGAAGAGGACAGACGACGGGTGGATGGCCACTGGCTGGTGGGTGTCCGTGGTGGGGAGTCAGGGTAAGCTaGTCATCCTTATGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: GRGQTTGGWPLAGGCPWWGVRVS*SSLCSR
Trigger: TCTTGAACATAAGGATGACCAGCTTACCCTGACTCC...CCACCACGGACACCCACCAGCCAGTGGCCATCCACCCGTCGTCTGTCCTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp ACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACCGGGAAGGAGGGTTGTaGAGGACGCTGTCCACAGAC +
Preference number: 4 (lower is better)
Translates to: TSKLRNLLWPFQKISLSHREGGL*RTLSTD
Trigger: GTCTGTGGACAGCGTCCTCCACAACCCTCCTTCCCG...GTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACGGTGGGTGTCCGTGGTaGCATAGGTGCCATCTGGCT +
Preference number: 4 (lower is better)
Translates to: TSKLRNLLWPFQKISLSHGGCPW*HRCHLA
Trigger: AGCCAGATGGCACCTATGCCACCACGGACACCCACC...GTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp AAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTGGTGGGTGTCCGTGGTaGCATAGGTGCCATCTGGCT +
Preference number: 4 (lower is better)
Translates to: KGNIQAPQPPVALPENLPGGCPW*HRCHLA
Trigger: AGCCAGATGGCACCTATGCCACCACGGACACCCACC...AGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp CAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCGCTGGTGGGTGTCCGTaGTGGCATAGGTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: QHPSSATSCGPSRKSPSVAGGCP*WHRCHL
Trigger: CAGATGGCACCTATGCCACCACGGACACCCACCAGC...GACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ACAAGAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAGGACAGACGACGGGTaGATGGCCACTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TRTKGNIQAPQPPVALPERTDDG*MATGWW
Trigger: CCACCAGCCAGTGGCCATCCACCCGTCGTCTGTCCT...TTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp CAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCGATGGGACCCTGGAATaGGGCTGCTCCATCAGGCCA +
Preference number: 4 (lower is better)
Translates to: QHPSSATSCGPSRKSPSVDGTLE*GCSIRP
Trigger: TGGCCTGATGGAGCAGCCCCATTCCAGGGTCCCATC...GACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR TCA 90 bp AAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCCCCCTCGCTGGATATaGACTTCTTGCGGACCCCTT +
Preference number: 4 (lower is better)
Translates to: KGNIQAPQPPVALPENLPPPRWI*TSCGPL
Trigger: AAGGGGTCCGCAAGAAGTTCATATCCAGCGAGGGGG...AGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp ACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACCCCCCTCGCTGGATATaGACTTCTTGCGGACCCCTT +
Preference number: 4 (lower is better)
Translates to: TSKLRNLLWPFQKISLSHPPRWI*TSCGPL
Trigger: AAGGGGTCCGCAAGAAGTTCATATCCAGCGAGGGGG...GTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp ACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTTTCCATCTCATGAAGAGGCTGTaGGCCAGGCAGCGGCGGACA +
Preference number: 4 (lower is better)
Translates to: THCTCVVRAPGIVLGTFHLMKRL*ARQRRT
Trigger: TGTCCGCCGCTGCCTGGCTCACAGCCTCTTCATGAG...ATGGAAAGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp CCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAAGAGCCACTGTGCATCTATaGCGCAGAGGTCCCGCATGT +
Preference number: 4 (lower is better)
Translates to: PSSATSCGPSRKSPSVTRATVHL*RRGPAC
Trigger: ACATGCGGGACCTCTGCGTCATAGATGCACAGTGGC...TCTTGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp CAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAAGAACTGGGATTACAGGCATaGGGTGATCCGCCCGCCTTG +
Preference number: 4 (lower is better)
Translates to: QAPQPPVALPENLPQSQELGLQA*GDPPAL
Trigger: CAAGGCGGGCGGATCACCTCATGCCTGTAATCCCAG...TTCTTGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR GCA 90 bp ACAAGAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAGCAGCATCACCACTTaGCTCCCGGGAGGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: TRTKGNIQAPQPPVALPESSITT*LPGGKD
Trigger: GTCCTTCCCTCCCGGGAGGCAAGTGGTGATGCTGCT...TTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000433302.7
CDS-3UTR GCA 90 bp CAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAAGAAAGCTGGGCCAACAGTTaGCCCCGCGCTTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: QAPQPPVALPENLPQSQESWANS*PRAWKM
Trigger: CATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCT...TTCTTGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp GAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCGACTCGGAGCTGCTGTaGATAGGGCAGGGAGGCGTA +
Preference number: 4 (lower is better)
Translates to: ELRATSKLRNLLWPFQKIDSELL*IGQGGV
Trigger: TACGCCTCCCTGCCCTATGCACAGCAGCTCCGAGTC...GATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp ACAAGAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAGACTCGGAGCTGCTGTaGATAGGGCAGGGAGGCGTA +
Preference number: 4 (lower is better)
Translates to: TRTKGNIQAPQPPVALPEDSELL*IGQGGV
Trigger: TACGCCTCCCTGCCCTATGCACAGCAGCTCCGAGTC...TTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp TCTCTAAGCGCCAACCTGGAAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCGACTCGGAGCTGCTGTaGATAGGGCAGGGAGGCGTA +
Preference number: 4 (lower is better)
Translates to: SLSANLEACCKDNCSPSSDSELL*IGQGGV
Trigger: TACGCCTCCCTGCCCTATGCACAGCAGCTCCGAGTC...GGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGCGCTTAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
ENST00000574023.1
CDS-3UTR GCA 90 bp TCCCTGTGCGCTGCCAAGCCTGCGTCTTCGATACCCGCTGCACTGCTAACACCTGTCTTCGATACCCGCTaGACTGCTAACACCTCAAGA +
Preference number: 4 (lower is better)
Translates to: SLCAAKPASSIPAALLTPVFDTR*TANTSR
Trigger: TCTTGAGGTGTTAGCAGTGCAGCGGGTATCGAAGAC...AGGTGTTAGCAGTGCAGCGGGTATCGAAGACGCAGGCTTGGCAGCGCACAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR GCA 90 bp CTCCCAACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTAGAGCCGGTAGCAGATaGCACTGTCCTCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LPTHCTCVVRAPGIVLGTRAGSR*HCPLCQ
Trigger: CTGGCAGAGAGGACAGTGGCATCTGCTACCGGCTCT...AGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGTTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp TCTCTAAGCGCCAACCTGGAAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCCCGTGGTGGCATAGGTaGCATCTGGCTGAAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SLSANLEACCKDNCSPSSPWWHR*HLAEAR
Trigger: CCGAGCTTCAGCCAGATGGCACCTATGCCACCACGG...GGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGCGCTTAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
ENST00000574023.1
CDS-3UTR GCA 90 bp ATAGGTGCCATCTGGCTGAAGCTCGGCGGTGCTCATGAAGAGGCTGTGAGCCAGCTCGTACAGCCACTGTaGATCTATGACGCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: IGAIWLKLGGAHEEAVSQLVQPL*IYDAEV
Trigger: GACCTCTGCGTCATAGATGCACAGTGGCTGTACGAG...CTGGCTCACAGCCTCTTCATGAGCACCGCCGAGCTTCAGCCAGATGGCACCTAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR GCA 90 bp TCCAGAAAGAGAGCATCCATGATCTCTGAAGAGCCTCTTGGGCAGCTTGGCCCCACCCTGGAATGGGGCTaGTCCATCAGGCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: SRKRASMISEEPLGQLGPTLEWG*SIRPQL
Trigger: AAGCTGTGGCCTGATGGAGCAGCCCCATTCCAGGGT...GGGGCCAAGCTGCCCAAGAGGCTCTTCAGAGATCATGGATGCTCTCTTTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp ATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCACTGTACGTGTGTCGAGTTGCCCCCGCGCTTaGAAGATGGGCAGACTCCGG +
Preference number: 4 (lower is better)
Translates to: MASSNIQPNGSQLTVRVSSCPRA*KMGRLR
Trigger: CCGGAGTCTGCCCATCTTCCAAGCGCGGGGGCAACT...CGACACACGTACAGTGAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTTTCCATTCCAGGTTTCGGAGCTaGGCCAACAGTTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: THCTCVVRAPGIVLGTFHSRFRS*ANSCPR
Trigger: GCGGGGGCAACTGTTGGCCCAGCTCCGAAACCTGGA...ATGGAAAGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp CAGCTTCCTCCTAAAGTACTCAGGGGCAGCCTCGTACAGCCACTGTGCATCTATCCCTTTGGGGCCCCTTaGAAGACTCGGAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QLPPKVLRGSLVQPLCIYPFGAP*KTRSCC
Trigger: ACAGCAGCTCCGAGTCTTCCAAGGGGCCCCAAAGGG...ATAGATGCACAGTGGCTGTACGAGGCTGCCCCTGAGTACTTTAGGAGGAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp CAGCTTCCTCCTAAAGTACTCAGGGGCAGCCTCGTACAGCCACTGTGCATCTATCGGGAAGGAGGGTTGTaGAGGACGCTGTCCACAGAC +
Preference number: 4 (lower is better)
Translates to: QLPPKVLRGSLVQPLCIYREGGL*RTLSTD
Trigger: GTCTGTGGACAGCGTCCTCCACAACCCTCCTTCCCG...ATAGATGCACAGTGGCTGTACGAGGCTGCCCCTGAGTACTTTAGGAGGAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp TCTCTAAGCGCCAACCTGGAAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCGCTGGTGGGTGTCCGTaGTGGCATAGGTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: SLSANLEACCKDNCSPSSAGGCP*WHRCHL
Trigger: CAGATGGCACCTATGCCACCACGGACACCCACCAGC...GGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGCGCTTAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
ENST00000574023.1
CDS-3UTR CCA 90 bp ACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTTTCCATTGGATGGCCACTGGCTaGTGGGTGTCCGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: THCTCVVRAPGIVLGTFHWMATG*WVSVVA
Trigger: TGCCACCACGGACACCCACCAGCCAGTGGCCATCCA...ATGGAAAGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCACTGTACGTGTGTCGTGGATGGCCACTGGCTaGTGGGTGTCCGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: MASSNIQPNGSQLTVRVSWMATG*WVSVVA
Trigger: TGCCACCACGGACACCCACCAGCCAGTGGCCATCCA...CGACACACGTACAGTGAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp AGCAGTAACATTCAGCCTAACGGCTCCCAACTCACTGTACGTGTGTCGTGCGTGGGGCGGCTCAGTTTCTaGCGGTTCTCAGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SSNIQPNGSQLTVRVSCVGRLSF*RFSASS
Trigger: GGAGGAAGCTGAGAACCGCCAGAAACTGAGCCGCCC...CACGCACGACACACGTACAGTGAGTTGGGAGCCGTTAGGCTGAATGTTACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp ATAGGTGCCATCTGGCTGAAGCTCGGCGGTGCTCATGAAGAGGCTGTGAGCCAGGCGCCATTGAAATACTaGGAGAACAGGTCCACATCC +
Preference number: 4 (lower is better)
Translates to: IGAIWLKLGGAHEEAVSQAPLKY*ENRSTS
Trigger: GGATGTGGACCTGTTCTCTCAGTATTTCAATGGCGC...CTGGCTCACAGCCTCTTCATGAGCACCGCCGAGCTTCAGCCAGATGGCACCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR TCA 90 bp CAAGAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAATCTCCTCCTGCCCAGTaGGGAACACCAGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: QELRATSKLRNLLWPFQKSPPAQ*GTPGCP
Trigger: AGGACATCCTGGTGTTCCTCACTGGGCAGGAGGAGA...TTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp CTTCTTGCGGACCCCTTGCACTTCCTCTCGCCGGGAAGGAGGGTTGTGGAGGACCGATGTTGGTTGAAATaGTCACTTTGCGATAGCCCT +
Preference number: 4 (lower is better)
Translates to: LLADPLHFLSPGRRVVEDRCWLK*SLCDSP
Trigger: AGGGCTATCGCAAAGTGATCATTTCAACCAACATCG...GTCCTCCACAACCCTCCTTCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR TCA 90 bp GAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCGCCACTGTGCATCTATaGCGCAGAGGTCCCGCATGT +
Preference number: 4 (lower is better)
Translates to: ELRATSKLRNLLWPFQKIATVHL*RRGPAC
Trigger: ACATGCGGGACCTCTGCGTCATAGATGCACAGTGGC...GATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp GGATCTCTGGCACGGTCATCTTATCAAACTTCTCAAACTCGTCCTCCGTGTAGAGCTCCCAGGGACCAGTaGTTCTGGCGGCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: GSLARSSYQTSQTRPPCRAPRDQ*FWRHPG
Trigger: CCCAGGATGCCGCCAGAATCACTGGTCCCTGGGAGC...TCTACACGGAGGACGAGTTTGAGAAGTTTGATAAGATGACCGTGCCAGAGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR GCA 90 bp GCTGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACCTCCTCTGCCGCCGCTaGCCGCAGTCAGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: AVLHIIWQAVTFSLTAPNLLCRR*PQSAAS
Trigger: TGATGCTGCTGACTGCGGGCAGCGGCGGCAGAGGAG...GTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000433302.7
CDS-3UTR GCA 90 bp ATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCACTGTACGTGTGTCGAGCTGGGCCAACAGTTaGCCCCGCGCTTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: MASSNIQPNGSQLTVRVSSWANS*PRAWKM
Trigger: CATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCT...CGACACACGTACAGTGAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp ACAAGAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAACAGCCGTCTGGGAGGTaGTTTGCAATGTCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: TRTKGNIQAPQPPVALPEQPSGR*FAMSRH
Trigger: GTGCCGAGACATTGCAAAGCACCTCCCAGACGGCTG...TTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp GAGACACAAGCGTTCAGTAGGGATCGCCATCCCAGGAGGTACGAGATAACAGCACAGCCGTCTGGGAGGTaGTTTGCAATGTCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: ETQAFSRDRHPRRYEITAQPSGR*FAMSRH
Trigger: GTGCCGAGACATTGCAAAGCACCTCCCAGACGGCTG...TGCTGTTATCTCGTACCTCCTGGGATGGCGATCCCTACTGAACGCTTGTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp GAGTGGTCCACCCTGAGACACAAGCGTTCAGTAGGGATCGCCATCCCAGGAGGTGCCAACCTGGAAGCCTaGTGTAAGGACAACTGTAGT +
Preference number: 4 (lower is better)
Translates to: EWSTLRHKRSVGIAIPGGANLEA*CKDNCS
Trigger: ACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGC...ACCTCCTGGGATGGCGATCCCTACTGAACGCTTGTGTCTCAGGGTGGACCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp TCCAGAAAGAGAGCATCCATGATCTCTGAAGAGCCTCTTGGGCAGCTTGGCCCCTACGTGTGTCGTGCGTaGTCCAGGCATAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SRKRASMISEEPLGQLGPYVCRA*SRHSSG
Trigger: CCCAGAACTATGCCTGGAGCACGCACGACACACGTA...GGGGCCAAGCTGCCCAAGAGGCTCTTCAGAGATCATGGATGCTCTCTTTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp GTCAGGATCTCCTCTGTACAGTGGAATTTGGGGGACATGAGGATGGTTTTGGCATCCAGGTTTCGGAGCTaGGCCAACAGTTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: VRISSVQWNLGDMRMVLASRFRS*ANSCPR
Trigger: GCGGGGGCAACTGTTGGCCCAGCTCCGAAACCTGGA...TGCCAAAACCATCCTCATGTCCCCCAAATTCCACTGTACAGAGGAGATCCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp CTGGAAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCCAGGGACCAGTGATTGGCACGTCTTGCTCATaGCTTCGATCTCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LEACCKDNCSPSSQGPVIGTSCS*LRSPPA
Trigger: GGCAGGAGGAGATCGAAGCCATGAGCAAGACGTGCC...AATCACTGGTCCCTGGGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
ENST00000574023.1
CDS-3UTR CCA 90 bp ACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTTTCCATCCCTTTGGGGCCCCTTaGAAGACTCGGAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: THCTCVVRAPGIVLGTFHPFGAP*KTRSCC
Trigger: ACAGCAGCTCCGAGTCTTCCAAGGGGCCCCAAAGGG...ATGGAAAGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR CCA 90 bp AAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTGCCAGGTTACACCTCTaGATCTCTGGCACGGTCATC +
Preference number: 4 (lower is better)
Translates to: KGNIQAPQPPVALPENLPARLHL*ISGTVI
Trigger: GATGACCGTGCCAGAGATCCAGAGGTGTAACCTGGC...AGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp CAGGGAGGCGTACAGAGGAAGGACCAGCATCGCAGGGCAGCCGTCTGGGAGGTGAATGTGATCTGGAGATaGCTTCGACATGAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: QGGVQRKDQHRRAAVWEVNVIWR*LRHEVK
Trigger: TTTGACTTCATGTCGAAGCCATCTCCAGATCACATT...CACCTCCCAGACGGCTGCCCTGCGATGCTGGTCCTTCCTCTGTACGCCTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp CATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAGGTCCAGTTGGGCAATaGCCGCCTGAATGTGATCTG +
Preference number: 4 (lower is better)
Translates to: HPSSATSCGPSRKSPSVTGPVGQ*PPECDL
Trigger: CAGATCACATTCAGGCGGCCATTGCCCAACTGGACC...TGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTTTCCATCGGGAAGGAGGGTTGTaGAGGACGCTGTCCACAGAC +
Preference number: 4 (lower is better)
Translates to: THCTCVVRAPGIVLGTFHREGGL*RTLSTD
Trigger: GTCTGTGGACAGCGTCCTCCACAACCCTCCTTCCCG...ATGGAAAGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCACTGTACGTGTGTCGGGCATAGGTGCCATCTaGCTGAAGCTCGGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: MASSNIQPNGSQLTVRVSGIGAI*LKLGGA
Trigger: AGCACCGCCGAGCTTCAGCCAGATGGCACCTATGCC...CGACACACGTACAGTGAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp CAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCCTCCGCAACCTCCTGTaGCCCTTCCAGAAAATCTCC +
Preference number: 4 (lower is better)
Translates to: QHPSSATSCGPSRKSPSVLRNLL*PFQKIS
Trigger: GGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAG...GACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp CTGGAAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCCAGGGACCAGTGATTGGACAGATGGGACCCTaGAATGGGGCTGCTCCATCA +
Preference number: 4 (lower is better)
Translates to: LEACCKDNCSPSSQGPVIGQMGP*NGAAPS
Trigger: TGATGGAGCAGCCCCATTCCAGGGTCCCATCTGTCC...AATCACTGGTCCCTGGGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR TCA 90 bp GCCATCTGGCTGAAGCTCGGCGGTGCTCATGAAGAGGCTGTGAGCCAGGCAGCGTTCAGCGATGTTGGTTaGAATGATCACTTTGCGATA +
Preference number: 4 (lower is better)
Translates to: AIWLKLGGAHEEAVSQAAFSDVG*NDHFAI
Trigger: TATCGCAAAGTGATCATTTCAACCAACATCGCTGAA...CGCTGCCTGGCTCACAGCCTCTTCATGAGCACCGCCGAGCTTCAGCCAGATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR TCA 90 bp TCTCTAAGCGCCAACCTGGAAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCTTGAGCAGGGTCATGTaGTCCCCCTCGCTGGATATG +
Preference number: 4 (lower is better)
Translates to: SLSANLEACCKDNCSPSSLSRVM*SPSLDM
Trigger: CATATCCAGCGAGGGGGATCACATGACCCTGCTCAA...GGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGCGCTTAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
ENST00000574023.1
CDS-3UTR TCA 90 bp TGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCGCTCGGCGGTGCTCATaGAGAGGCTGTGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: CTSHHMASSNIQPNGSQLARRCS*RGCEPG
Trigger: GCCTGGCTCACAGCCTCTTCATGAGCACCGCCGAGC...GAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp CATCAGGCCACAGCTTCCAGAAAGAGAGCATCCATGATCTCTGAAGAGCCTCTTGACAGGGTCACGCACTaGGGACCAGGAGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: HQATASRKRASMISEEPLDRVTH*GPGGSF
Trigger: AAAGGAGCCTCCTGGTCCTCAGTGCGTGACCCTGTC...AAGAGGCTCTTCAGAGATCATGGATGCTCTCTTTCTGGAAGCTGTGGCCTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR TCA 90 bp ACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAGACTGAGCCGGACTTaGCATACACAACTCCGGACA +
Preference number: 4 (lower is better)
Translates to: TSKLRNLLWPFQKISLSHRLSRT*HTQLRT
Trigger: TGTCCGGAGTTGTGTATGTCAAGTCCGGCTCAGTCT...GTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR TCA 90 bp AGCAGTAACATTCAGCCTAACGGCTCCCAACTCACTGTACGTGTGTCGTGCGTGTGTATAGCCAACCGATaGGGACCGCGTTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SSNIQPNGSQLTVRVSCVCIANR*GPRCPG
Trigger: ACCTGGACAACGCGGTCCTCATCGGTTGGCTATACA...CACGCACGACACACGTACAGTGAGTTGGGAGCCGTTAGGCTGAATGTTACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572490.1
CDS-3UTR GCA 90 bp GCTCCAGGCATAGTTCTGGGTACTTTCCATTCCTTTTCTCTAAACTTTATGAACTTCCTCGCCGCCACGTaGTGGCGGCTCCCGGCGACC +
Preference number: 4 (lower is better)
Translates to: APGIVLGTFHSFSLNFMNFLAAT*WRLPAT
Trigger: GGTCGCCGGGAGCCGCCAGCACGTGGCGGCGAGGAA...GTTCATAAAGTTTAGAGAAAAGGAATGGAAAGTACCCAGAACTATGCCTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR GCA 90 bp TCCAGAAAGAGAGCATCCATGATCTCTGAAGAGCCTCTTGGGCAGCTTGGCCCCTGTCTCGGCACGTCTTaGTCATGGCTTCGATCTCCT +
Preference number: 4 (lower is better)
Translates to: SRKRASMISEEPLGQLGPCLGTS*SWLRSP
Trigger: AGGAGATCGAAGCCATGAGCAAGACGTGCCGAGACA...GGGGCCAAGCTGCCCAAGAGGCTCTTCAGAGATCATGGATGCTCTCTTTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR GCA 90 bp CATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAGTCTGGGAGGTGCTTTaGAATGTCTCGGCACGTCTT +
Preference number: 4 (lower is better)
Translates to: HPSSATSCGPSRKSPSVTVWEVL*NVSARL
Trigger: AAGACGTGCCGAGACATTGCAAAGCACCTCCCAGAC...TGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp AAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTGTCTGGGAGGTGCTTTaGAATGTCTCGGCACGTCTT +
Preference number: 4 (lower is better)
Translates to: KGNIQAPQPPVALPENLPVWEVL*NVSARL
Trigger: AAGACGTGCCGAGACATTGCAAAGCACCTCCCAGAC...AGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp TCCCTGTGCGCTGCCAAGCCTGCGTCTTCGATACCCGCTGCACTGCTAACACCTCTGTGCTCTGACTTCTaGTACCAGCGTCATATTCTT +
Preference number: 4 (lower is better)
Translates to: SLCAAKPASSIPAALLTPLCSDF*YQRHIL
Trigger: AAGAATATGACGCTGGTAGCAGAAGTCAGAGCACAG...AGGTGTTAGCAGTGCAGCGGGTATCGAAGACGCAGGCTTGGCAGCGCACAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR GCA 90 bp TGTAAGCCCAGATGTGGTGTGGTATCTGGCATAAGCCAATGTTCTCTGGGTTCTCGACGCAGGCCGGCTTaGAGTGGAAGAGGACAGACG +
Preference number: 4 (lower is better)
Translates to: CKPRCGVVSGISQCSLGSRRRPA*SGRGQT
Trigger: CGTCTGTCCTCTTCCACTGCAAGCCGGCCTGCGTCG...AGAACCCAGAGAACATTGGCTTATGCCAGATACCACACCACATCTGGGCTTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR GCA 90 bp AAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCTCGTACAGCCACTGTaGATCTATGACGCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: KGNIQAPQPPVALPENLPLVQPL*IYDAEV
Trigger: GACCTCTGCGTCATAGATGCACAGTGGCTGTACGAG...AGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp TCTCTAAGCGCCAACCTGGAAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCTACGTGTGTCGTGCGTaGTCCAGGCATAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SLSANLEACCKDNCSPSSYVCRA*SRHSSG
Trigger: CCCAGAACTATGCCTGGAGCACGCACGACACACGTA...GGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGCGCTTAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp GACCTGCTGTTTGCAGTCCTGCCCCTTGTAGTGTTACTCTGGGTGTTGCACACTACAGCAATGATGCCCTaGCGGCTGATCCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: DLLFAVLPLVVLLWVLHTTAMMP*RLIPPS
Trigger: TGAAGGAGGGATCAGCCGCCAGGGCATCATTGCTGT...AGTGTGCAACACCCAGAGTAACACTACAAGGGGCAGGACTGCAAACAGCAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp TATGACGCAGAGGTCCCGCATGTAGCACTTGTTGGTGTAGAGCAGCTCAGTGTAGCTTCCTGGTGGATCTaGAAGACGGAGACAAGCGCG +
Preference number: 4 (lower is better)
Translates to: YDAEVPHVALVGVEQLSVASWWI*KTETSA
Trigger: CGCGCTTGTCTCCGTCTTCCAGATCCACCAGGAAGC...TACACTGAGCTGCTCTACACCAACAAGTGCTACATGCGGGACCTCTGCGTCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp GTCAGGATCTCCTCTGTACAGTGGAATTTGGGGGACATGAGGATGGTTTTGGCACGCAGGGCAGCCGTCTaGGAGGTGCTTTGCAATGTC +
Preference number: 4 (lower is better)
Translates to: VRISSVQWNLGDMRMVLARRAAV*EVLCNV
Trigger: GACATTGCAAAGCACCTCCCAGACGGCTGCCCTGCG...TGCCAAAACCATCCTCATGTCCCCCAAATTCCACTGTACAGAGGAGATCCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp CTCCCAACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTGCTGAAGCATCACACTaGCCAGGTTACACCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LPTHCTCVVRAPGIVLGTAEASH*PGYTSG
Trigger: TCCAGAGGTGTAACCTGGCCAGTGTGATGCTTCAGC...AGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGTTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp CAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAAGAAGGTCCAGTTGGGCAATaGCCGCCTGAATGTGATCTG +
Preference number: 4 (lower is better)
Translates to: QAPQPPVALPENLPQSQEGPVGQ*PPECDL
Trigger: CAGATCACATTCAGGCGGCCATTGCCCAACTGGACC...TTCTTGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp TCTCTAAGCGCCAACCTGGAAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCGGTCCAGTTGGGCAATaGCCGCCTGAATGTGATCTG +
Preference number: 4 (lower is better)
Translates to: SLSANLEACCKDNCSPSSGPVGQ*PPECDL
Trigger: CAGATCACATTCAGGCGGCCATTGCCCAACTGGACC...GGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGCGCTTAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
ENST00000574023.1
CDS-3UTR CCA 90 bp TCACAATCACTTTCAGAGGAAGTTTCCCGAGTTCCTTTCTCCTCTTCTGTGCAGCGGGTGGATGGCCACTaGCTGGTGGGTGTCCGTGGT +
Preference number: 4 (lower is better)
Translates to: SQSLSEEVSRVPFSSSVQRVDGH*LVGVRG
Trigger: ACCACGGACACCCACCAGCCAGTGGCCATCCACCCG...CTGCACAGAAGAGGAGAAAGGAACTCGGGAAACTTCCTCTGAAAGTGATTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp GCTGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACCAGACGACGGGTGGATaGCCACTGGCTGGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: AVLHIIWQAVTFSLTAPNQTTGG*PLAGGC
Trigger: ACACCCACCAGCCAGTGGCCATCCACCCGTCGTCTG...GTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp GTCAGGATCTCCTCTGTACAGTGGAATTTGGGGGACATGAGGATGGTTTTGGCAATTCTGGCGGCATCCTaGGGCGGCTCAGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: VRISSVQWNLGDMRMVLAILAAS*GGSVSG
Trigger: GCCAGAAACTGAGCCGCCCCAGGATGCCGCCAGAAT...TGCCAAAACCATCCTCATGTCCCCCAAATTCCACTGTACAGAGGAGATCCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp GACCTGCTGTTTGCAGTCCTGCCCCTTGTAGTGTTACTCTGGGTGTTGCACACTCTCCGCAACCTCCTGTaGCCCTTCCAGAAAATCTCC +
Preference number: 4 (lower is better)
Translates to: DLLFAVLPLVVLLWVLHTLRNLL*PFQKIS
Trigger: GGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAG...AGTGTGCAACACCCAGAGTAACACTACAAGGGGCAGGACTGCAAACAGCAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR CAA 72 bp GGCGGACACTCTCCACGTCTCCTCGGGATGATGCGATaGGCATTGACATCTTTAAGCAGATGTCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GGHSPRLLGMMR*ALTSLSRCPSA
Trigger: AGCTGAGGGACATCTGCTTAAAGATGTCAATGCCAATCGCATCATCCCGAGGAGACGTGGAGAGTGTCCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR TCA 90 bp TGTTGGTGTAGAGCAGCTCAGTGTACACGACGCAGGCCGGCTTGCAGTGGAAGACCGAAGCAAAGAGTCTaGAATTGCTTCACGCAGAAG +
Preference number: 4 (lower is better)
Translates to: CWCRAAQCTRRRPACSGRPKQRV*NCFTQK
Trigger: CTTCTGCGTGAAGCAATTTCAGACTCTTTGCTTCGG...TCTTCCACTGCAAGCCGGCCTGCGTCGTGTACACTGAGCTGCTCTACACCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR TCA 90 bp CAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCGCGCCATTGAAATACTaGGAGAACAGGTCCACATCC +
Preference number: 4 (lower is better)
Translates to: QHPSSATSCGPSRKSPSVAPLKY*ENRSTS
Trigger: GGATGTGGACCTGTTCTCTCAGTATTTCAATGGCGC...GACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR TCA 90 bp CCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAAGATTCATTGCTAGAAGCTaGAGCATCACACTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PSSATSCGPSRKSPSVTRFIARS*SITLAR
Trigger: CCTGGCCAGTGTGATGCTTCAGCTTCTAGCAATGAA...TCTTGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp CAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCTCAGGCACCTTCAGCTaGTTCCAAGGCTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: QHPSSATSCGPSRKSPSVSGTFS*FQGFSK
Trigger: CTTAGAGAAGCCTTGGAATCAGCTGAAGGTGCCTGA...GACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp GAGCACATCTGTGTGGATAGTCCGTTCGTGAGCTTCATCCAAAATGACACAGCTAGCTGGGCCAACAGTTaGCCCCGCGCTTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: EHICVDSPFVSFIQNDTASWANS*PRAWKM
Trigger: CATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCT...AGCTGTGTCATTTTGGATGAAGCTCACGAACGGACTATCCACACAGATGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR GCA 90 bp CCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAAGAGTCTTCGATACCCGCTaGACTGCTAACACCTCAAGA +
Preference number: 4 (lower is better)
Translates to: PSSATSCGPSRKSPSVTRVFDTR*TANTSR
Trigger: TCTTGAGGTGTTAGCAGTGCAGCGGGTATCGAAGAC...TCTTGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp AAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTGTCTTCGATACCCGCTaGACTGCTAACACCTCAAGA +
Preference number: 4 (lower is better)
Translates to: KGNIQAPQPPVALPENLPVFDTR*TANTSR
Trigger: TCTTGAGGTGTTAGCAGTGCAGCGGGTATCGAAGAC...AGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp GAGTCTGAAATTGCTTCACGCAGAAGCATGCCATCTGTCAGAAACTTGATCCTGGTGCGCTGCCAAGCCTaGGTCTTCGATACCCGCTGC +
Preference number: 4 (lower is better)
Translates to: ESEIASRRSMPSVRNLILVRCQA*VFDTRC
Trigger: GCAGCGGGTATCGAAGACGCAGGCTTGGCAGCGCAC...CAGGATCAAGTTTCTGACAGATGGCATGCTTCTGCGTGAAGCAATTTCAGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR GCA 90 bp GTCAGGATCTCCTCTGTACAGTGGAATTTGGGGGACATGAGGATGGTTTTGGCATTCTTGCGGACCCCTTaGACTTCCTCTCGCCGGGAA +
Preference number: 4 (lower is better)
Translates to: VRISSVQWNLGDMRMVLAFLRTP*TSSRRE
Trigger: TTCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAGAA...TGCCAAAACCATCCTCATGTCCCCCAAATTCCACTGTACAGAGGAGATCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR GCA 90 bp CAAGAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAACTCGTACAGCCACTGTaGATCTATGACGCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: QELRATSKLRNLLWPFQKLVQPL*IYDAEV
Trigger: GACCTCTGCGTCATAGATGCACAGTGGCTGTACGAG...TTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp GAGACACAAGCGTTCAGTAGGGATCGCCATCCCAGGAGGTACGAGATAACAGCACCACAGGGCAGAACTTaGCTCCATTCAGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: ETQAFSRDRHPRRYEITAPQGRT*LHSGIS
Trigger: AGAGATGCCTGAATGGAGGCAAGTTCTGCCCTGTGG...TGCTGTTATCTCGTACCTCCTGGGATGGCGATCCCTACTGAACGCTTGTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp TGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCAGTTGCCCCCGCGCTTaGAAGATGGGCAGACTCCGG +
Preference number: 4 (lower is better)
Translates to: CTSHHMASSNIQPNGSQLSCPRA*KMGRLR
Trigger: CCGGAGTCTGCCCATCTTCCAAGCGCGGGGGCAACT...GAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ACAAGAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAGCTGAAGCATCACACTaGCCAGGTTACACCTCTGGA +
Preference number: 4 (lower is better)
Translates to: TRTKGNIQAPQPPVALPEAEASH*PGYTSG
Trigger: TCCAGAGGTGTAACCTGGCCAGTGTGATGCTTCAGC...TTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp CAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAAGAAATGCTTTCACGCTCCTaGAAGTCAGGCACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: QAPQPPVALPENLPQSQEMLSRS*KSGTFS
Trigger: GCTGAAGGTGCCTGACTTCCAGGAGCGTGAAAGCAT...TTCTTGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp GACCTGCTGTTTGCAGTCCTGCCCCTTGTAGTGTTACTCTGGGTGTTGCACACTGAGACAGACACAGAGTaGTCCACCCTGAGACACAAG +
Preference number: 4 (lower is better)
Translates to: DLLFAVLPLVVLLWVLHTETDTE*STLRHK
Trigger: CTTGTGTCTCAGGGTGGACCACTCTGTGTCTGTCTC...AGTGTGCAACACCCAGAGTAACACTACAAGGGGCAGGACTGCAAACAGCAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp GAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCGAGACAGACACAGAGTaGTCCACCCTGAGACACAAG +
Preference number: 4 (lower is better)
Translates to: ELRATSKLRNLLWPFQKIETDTE*STLRHK
Trigger: CTTGTGTCTCAGGGTGGACCACTCTGTGTCTGTCTC...GATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp CATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAAGGAGGCTCCTTTACTaGTCTCTGCTTGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: HPSSATSCGPSRKSPSVTRRLLY*SLLGDR
Trigger: TCTGTCTCCAAGCAGAGACCAGTAAAGGAGCCTCCT...TGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp CTCCCAACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTTGCCCGCATGTTCACTaGTGCCCAGTTAGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: LPTHCTCVVRAPGIVLGTCPHVH*CPVREK
Trigger: TTTCTCTCTAACTGGGCACCAGTGAACATGCGGGCA...AGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGTTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp ATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCACTGTACGTGTGTCGCAAGACCACTGTCTTTaGGGCCCCTTGGAAGACTCG +
Preference number: 4 (lower is better)
Translates to: MASSNIQPNGSQLTVRVSQDHCL*GPLEDS
Trigger: CGAGTCTTCCAAGGGGCCCCAAAGACAGTGGTCTTG...CGACACACGTACAGTGAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433302.7
3UTR CAA 72 bp CCACGGCTAGTGTTGGAAATAAAGACTGAGCCGGACTaGACATACACAACTCCGGACAGATGGGACCCTGGA +
Preference number: 4 (lower is better)
Translates to: PRLVLEIKTEPD*TYTTPDRWDPG
Trigger: TCCAGGGTCCCATCTGTCCGGAGTTGTGTATGTCAAGTCCGGCTCAGTCTTTATTTCCAACACTAGCCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR TCA 90 bp CTGGAAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCCAGGGACCAGTGATTGATCCTGGTGTCTTCTaGGGTGACATCATCAAAGCG +
Preference number: 4 (lower is better)
Translates to: LEACCKDNCSPSSQGPVIDPGVF*GDIIKA
Trigger: CGCTTTGATGATGTCACCTCAGAAGACACCAGGATC...AATCACTGGTCCCTGGGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000572490.1
ENST00000574023.1
CDS-3UTR TCA 90 bp CCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAAGACCGAAGCAAAGAGTCTaGAATTGCTTCACGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PSSATSCGPSRKSPSVTRPKQRV*NCFTQK
Trigger: CTTCTGCGTGAAGCAATTTCAGACTCTTTGCTTCGG...TCTTGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR TCA 90 bp TGTTGGTGTAGAGCAGCTCAGTGTACACGACGCAGGCCGGCTTGCAGTGGAAGACACATCCATCGTAGCTaGCATCACAATCACTTTCAG +
Preference number: 4 (lower is better)
Translates to: CWCRAAQCTRRRPACSGRHIHRS*HHNHFQ
Trigger: CTGAAAGTGATTGTGATGTCAGCTACGATGGATGTG...TCTTCCACTGCAAGCCGGCCTGCGTCGTGTACACTGAGCTGCTCTACACCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR TCA 90 bp TCTCTAAGCGCCAACCTGGAAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCGCGCCATTGAAATACTaGGAGAACAGGTCCACATCC +
Preference number: 4 (lower is better)
Translates to: SLSANLEACCKDNCSPSSAPLKY*ENRSTS
Trigger: GGATGTGGACCTGTTCTCTCAGTATTTCAATGGCGC...GGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGCGCTTAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000572490.1
ENST00000574023.1
CDS-3UTR TCA 90 bp GATCTCTGGCACGGTCATCTTATCAAACTTCTCAAACTCGTCCTCCGTGTAGAGTCTCCTCCTGCCCAGTaGGGAACACCAGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: DLWHGHLIKLLKLVLRVESPPAQ*GTPGCP
Trigger: AGGACATCCTGGTGTTCCTCACTGGGCAGGAGGAGA...CTCTACACGGAGGACGAGTTTGAGAAGTTTGATAAGATGACCGTGCCAGAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR TCA 90 bp AGCAGTAACATTCAGCCTAACGGCTCCCAACTCACTGTACGTGTGTCGTGCGTGAGGTCCGATAGATATTaGGCAGGGTCATGTGATCCC +
Preference number: 4 (lower is better)
Translates to: SSNIQPNGSQLTVRVSCVRSDRY*AGSCDP
Trigger: GGGATCACATGACCCTGCTCAATATCTATCGGACCT...CACGCACGACACACGTACAGTGAGTTGGGAGCCGTTAGGCTGAATGTTACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp GTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTGCTCGGCGGTGCTCATaGAGAGGCTGTGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VRDNSTSLWKLLQKSVLFARRCS*RGCEPG
Trigger: GCCTGGCTCACAGCCTCTTCATGAGCACCGCCGAGC...AAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp GGATCTCTGGCACGGTCATCTTATCAAACTTCTCAAACTCGTCCTCCGTGTAGAGCCACTGTGCATCTATaGCGCAGAGGTCCCGCATGT +
Preference number: 4 (lower is better)
Translates to: GSLARSSYQTSQTRPPCRATVHL*RRGPAC
Trigger: ACATGCGGGACCTCTGCGTCATAGATGCACAGTGGC...TCTACACGGAGGACGAGTTTGAGAAGTTTGATAAGATGACCGTGCCAGAGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR TCA 90 bp ACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTTTCCATAGCATCCATGATCTCTaGAGAGCCTCTTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: THCTCVVRAPGIVLGTFHSIHDL*RASWAA
Trigger: AGCTGCCCAAGAGGCTCTTCAGAGATCATGGATGCT...ATGGAAAGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR TCA 90 bp CTGGAAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCCAGGGACCAGTGATTGTGCATCTATTTACATaGAGCTGCTCACGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LEACCKDNCSPSSQGPVIVHLFT*SCSREL
Trigger: CAGCTCCCGTGAGCAGCTTCATGTAAATAGATGCAC...AATCACTGGTCCCTGGGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR GCA 90 bp CTGGAAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCCAGGGACCAGTGATTGTCTTCGATACCCGCTaGACTGCTAACACCTCAAGA +
Preference number: 4 (lower is better)
Translates to: LEACCKDNCSPSSQGPVIVFDTR*TANTSR
Trigger: TCTTGAGGTGTTAGCAGTGCAGCGGGTATCGAAGAC...AATCACTGGTCCCTGGGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
ENST00000574023.1
CDS-3UTR GCA 90 bp CTGTGCTCTGACTTCTGCTACCAGCGTCATATTCTTGCTGTTGACAAAATTCTCGCCCTCCCTGTGCGCTaGCAAGCCTGCGTCTTCGAT +
Preference number: 4 (lower is better)
Translates to: LCSDFCYQRHILAVDKILALPVR*QACVFD
Trigger: ATCGAAGACGCAGGCTTGGCAGCGCACAGGGAGGGC...GAGAATTTTGTCAACAGCAAGAATATGACGCTGGTAGCAGAAGTCAGAGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR GCA 90 bp CTGTGCTCTGACTTCTGCTACCAGCGTCATATTCTTGCTGTTGACAAAATTCTCCGACGCAGGCCGGCTTaGAGTGGAAGAGGACAGACG +
Preference number: 4 (lower is better)
Translates to: LCSDFCYQRHILAVDKILRRRPA*SGRGQT
Trigger: CGTCTGTCCTCTTCCACTGCAAGCCGGCCTGCGTCG...GAGAATTTTGTCAACAGCAAGAATATGACGCTGGTAGCAGAAGTCAGAGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR GCA 90 bp GAGACACAAGCGTTCAGTAGGGATCGCCATCCCAGGAGGTACGAGATAACAGCAGCCAACCTGGAAGCCTaGTGTAAGGACAACTGTAGT +
Preference number: 4 (lower is better)
Translates to: ETQAFSRDRHPRRYEITAANLEA*CKDNCS
Trigger: ACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGC...TGCTGTTATCTCGTACCTCCTGGGATGGCGATCCCTACTGAACGCTTGTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp CTCCCAACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTGGAGTTGAGCAAAGATaGTTTCACGCTCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LPTHCTCVVRAPGIVLGTGVEQR*FHAPGS
Trigger: ACTTCCAGGAGCGTGAAAGCATCTTTGCTCAACTCC...AGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGTTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp CCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAAGATCCTTTACTGGTCTCTaGTTGGAGACAGACACAGAG +
Preference number: 4 (lower is better)
Translates to: PSSATSCGPSRKSPSVTRSFTGL*LETDTE
Trigger: CTCTGTGTCTGTCTCCAAGCAGAGACCAGTAAAGGA...TCTTGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp CCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAAGAAGGCGTGTGCCACCATaGCCAGCTAAGTTTTCTATT +
Preference number: 4 (lower is better)
Translates to: PSSATSCGPSRKSPSVTRRRVPP*PAKFSI
Trigger: AATAGAAAACTTAGCTGGGCATGGTGGCACACGCCT...TCTTGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp TGTTGGTGTAGAGCAGCTCAGTGTACACGACGCAGGCCGGCTTGCAGTGGAAGACATTCTGAGGCTGTTTaGTGTAAAACACCTGGATCG +
Preference number: 4 (lower is better)
Translates to: CWCRAAQCTRRRPACSGRHSEAV*CKTPGS
Trigger: CGATCCAGGTGTTTTACACCAAACAGCCTCAGAATG...TCTTCCACTGCAAGCCGGCCTGCGTCGTGTACACTGAGCTGCTCTACACCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp TGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCCGCAGGGCAGCCGTCTaGGAGGTGCTTTGCAATGTC +
Preference number: 4 (lower is better)
Translates to: CTSHHMASSNIQPNGSQLRRAAV*EVLCNV
Trigger: GACATTGCAAAGCACCTCCCAGACGGCTGCCCTGCG...GAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp GAGGTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGGGCATAGGTGCCATCTaGCTGAAGCTCGGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: EVRDNSTSLWKLLQKSVLGIGAI*LKLGGA
Trigger: AGCACCGCCGAGCTTCAGCCAGATGGCACCTATGCC...CAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ACACGTGACAGGATTCAGAAGGTACAAATCAACCTTCACCCAGGAAGCTTACATTGGATGGCCACTGGCTaGTGGGTGTCCGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: TRDRIQKVQINLHPGSLHWMATG*WVSVVA
Trigger: TGCCACCACGGACACCCACCAGCCAGTGGCCATCCA...ATGTAAGCTTCCTGGGTGAAGGTTGATTTGTACCTTCTGAATCCTGTCACGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp ATCTGGAGATGGCTTCGACATGAAGTCAAAGGTGAGCACATTTGGGACTTTCATAGGACAGACGACGGGTaGATGGCCACTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: IWRWLRHEVKGEHIWDFHRTDDG*MATGWW
Trigger: CCACCAGCCAGTGGCCATCCACCCGTCGTCTGTCCT...ATGAAAGTCCCAAATGTGCTCACCTTTGACTTCATGTCGAAGCCATCTCCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR TCA 90 bp GAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCCATCTGTCAGAAACTTaGTCCTGGTGTCTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: ELRATSKLRNLLWPFQKIHLSET*SWCLLR
Trigger: CCTCAGAAGACACCAGGATCAAGTTTCTGACAGATG...GATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR TCA 90 bp TGTAAGCCCAGATGTGGTGTGGTATCTGGCATAAGCCAATGTTCTCTGGGTTCTGGACGGGGGCGCCATTaGAATACTGAGAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: CKPRCGVVSGISQCSLGSGRGRH*NTERTG
Trigger: ACCTGTTCTCTCAGTATTTCAATGGCGCCCCCGTCC...AGAACCCAGAGAACATTGGCTTATGCCAGATACCACACCACATCTGGGCTTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR TCA 90 bp AAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTGGAATTTGGGGGACATaGGGATGGTTTTGGCAAATT +
Preference number: 4 (lower is better)
Translates to: KGNIQAPQPPVALPENLPGIWGT*GWFWQI
Trigger: AATTTGCCAAAACCATCCTCATGTCCCCCAAATTCC...AGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp TGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCCCCCCTCGCTGGATATaGACTTCTTGCGGACCCCTT +
Preference number: 4 (lower is better)
Translates to: CTSHHMASSNIQPNGSQLPPRWI*TSCGPL
Trigger: AAGGGGTCCGCAAGAAGTTCATATCCAGCGAGGGGG...GAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp TACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTGCTCGGCGGTGCTCATaGAGAGGCTGTGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: YEITAPPSGNFYRSQFCFARRCS*RGCEPG
Trigger: GCCTGGCTCACAGCCTCTTCATGAGCACCGCCGAGC...AAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp CTTCCCATTGGAGTCAGGGTAAGCTGGTCATCCTTATGTTCAAGAGCACCTAACTGTATAGCCAACCGATaGGGACCGCGTTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LPIGVRVSWSSLCSRAPNCIANR*GPRCPG
Trigger: ACCTGGACAACGCGGTCCTCATCGGTTGGCTATACA...GTTAGGTGCTCTTGAACATAAGGATGACCAGCTTACCCTGACTCCAATGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR GCA 90 bp TACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTCTCCTCTGCCGCCGCTaGCCGCAGTCAGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: YEITAPPSGNFYRSQFCFLLCRR*PQSAAS
Trigger: TGATGCTGCTGACTGCGGGCAGCGGCGGCAGAGGAG...AAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000433302.7
CDS-3UTR GCA 90 bp GCTCCAGGCATAGTTCTGGGTACTTTCCATTCCTTTTCTCTAAACTTTATGAACGGCAGACTCCGGCGCTaGAGCTCCACAGCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: APGIVLGTFHSFSLNFMNGRLRR*SSTASG
Trigger: CCCTGAAGCTGTGGAGCTGCAGCGCCGGAGTCTGCC...GTTCATAAAGTTTAGAGAAAAGGAATGGAAAGTACCCAGAACTATGCCTGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp GTCAGGATCTCCTCTGTACAGTGGAATTTGGGGGACATGAGGATGGTTTTGGCAGTCTGGGAGGTGCTTTaGAATGTCTCGGCACGTCTT +
Preference number: 4 (lower is better)
Translates to: VRISSVQWNLGDMRMVLAVWEVL*NVSARL
Trigger: AAGACGTGCCGAGACATTGCAAAGCACCTCCCAGAC...TGCCAAAACCATCCTCATGTCCCCCAAATTCCACTGTACAGAGGAGATCCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR GCA 90 bp GACCTGCTGTTTGCAGTCCTGCCCCTTGTAGTGTTACTCTGGGTGTTGCACACTGGAGTTGAGCAAAGATaGTTTCACGCTCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: DLLFAVLPLVVLLWVLHTGVEQR*FHAPGS
Trigger: ACTTCCAGGAGCGTGAAAGCATCTTTGCTCAACTCC...AGTGTGCAACACCCAGAGTAACACTACAAGGGGCAGGACTGCAAACAGCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR GCA 90 bp ACAAGAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAACAAACACCTGAGGCATaGAATCTGCTTGGAGTGCAT +
Preference number: 4 (lower is better)
Translates to: TRTKGNIQAPQPPVALPEQTPEA*NLLGVH
Trigger: ATGCACTCCAAGCAGATTGCATGCCTCAGGTGTTTG...TTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp AAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCATTCTGAGGCTGTTTaGTGTAAAACACCTGGATCG +
Preference number: 4 (lower is better)
Translates to: KGNIQAPQPPVALPENLPHSEAV*CKTPGS
Trigger: CGATCCAGGTGTTTTACACCAAACAGCCTCAGAATG...AGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR CCA 90 bp GAGGTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGGGCACGTCTTGCTCATaGCTTCGATCTCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: EVRDNSTSLWKLLQKSVLGTSCS*LRSPPA
Trigger: GGCAGGAGGAGATCGAAGCCATGAGCAAGACGTGCC...CAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp CTTCCCATTGGAGTCAGGGTAAGCTGGTCATCCTTATGTTCAAGAGCACCTAACTTTGCGATAGCCCTTTaGGGCCCCTTGGAAGACTCG +
Preference number: 4 (lower is better)
Translates to: LPIGVRVSWSSLCSRAPNFAIAL*GPLEDS
Trigger: CGAGTCTTCCAAGGGGCCCCAAAGGGCTATCGCAAA...GTTAGGTGCTCTTGAACATAAGGATGACCAGCTTACCCTGACTCCAATGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp CATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAACACCTCTGGATCTCTaGCACGGTCATCTTATCAAA +
Preference number: 4 (lower is better)
Translates to: HPSSATSCGPSRKSPSVTTPLDL*HGHLIK
Trigger: TTTGATAAGATGACCGTGCCAGAGATCCAGAGGTGT...TGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACACACCTCTGGATCTCTaGCACGGTCATCTTATCAAA +
Preference number: 4 (lower is better)
Translates to: TSKLRNLLWPFQKISLSHTPLDL*HGHLIK
Trigger: TTTGATAAGATGACCGTGCCAGAGATCCAGAGGTGT...GTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp GAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCCGCCTGAATGTGATCTaGAGATGGCTTCGACATGAA +
Preference number: 4 (lower is better)
Translates to: ELRATSKLRNLLWPFQKIRLNVI*RWLRHE
Trigger: TTCATGTCGAAGCCATCTCCAGATCACATTCAGGCG...GATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp CAGCTTCCTCCTAAAGTACTCAGGGGCAGCCTCGTACAGCCACTGTGCATCTATCGCCTGAATGTGATCTaGAGATGGCTTCGACATGAA +
Preference number: 4 (lower is better)
Translates to: QLPPKVLRGSLVQPLCIYRLNVI*RWLRHE
Trigger: TTCATGTCGAAGCCATCTCCAGATCACATTCAGGCG...ATAGATGCACAGTGGCTGTACGAGGCTGCCCCTGAGTACTTTAGGAGGAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp GAGACACAAGCGTTCAGTAGGGATCGCCATCCCAGGAGGTACGAGATAACAGCACATCTTTCTTCCCATTaGAGTCAGGGTAAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: ETQAFSRDRHPRRYEITAHLSSH*SQGKLV
Trigger: GACCAGCTTACCCTGACTCCAATGGGAAGAAAGATG...TGCTGTTATCTCGTACCTCCTGGGATGGCGATCCCTACTGAACGCTTGTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp GAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCATCTCCTCTGTACAGTaGAATTTGGGGGACATGAGG +
Preference number: 4 (lower is better)
Translates to: ELRATSKLRNLLWPFQKIISSVQ*NLGDMR
Trigger: CCTCATGTCCCCCAAATTCCACTGTACAGAGGAGAT...GATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp TCTCTAAGCGCCAACCTGGAAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCATCTCCTCTGTACAGTaGAATTTGGGGGACATGAGG +
Preference number: 4 (lower is better)
Translates to: SLSANLEACCKDNCSPSSISSVQ*NLGDMR
Trigger: CCTCATGTCCCCCAAATTCCACTGTACAGAGGAGAT...GGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGCGCTTAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
ENST00000574023.1
CDS-3UTR CCA 90 bp ATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCACTGTACGTGTGTCGACAGCAGGGAGACAATaGTCAGGATCTCCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: MASSNIQPNGSQLTVRVSTAGRQ*SGSPLY
Trigger: GTACAGAGGAGATCCTGACCATTGTCTCCCTGCTGT...CGACACACGTACAGTGAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp AGGTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTGGCATAGGTGCCATCTaGCTGAAGCTCGGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: RYEITAPPSGNFYRSQFCGIGAI*LKLGGA
Trigger: AGCACCGCCGAGCTTCAGCCAGATGGCACCTATGCC...ACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp GTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTCAGACGACGGGTGGATaGCCACTGGCTGGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: VRDNSTSLWKLLQKSVLFQTTGG*PLAGGC
Trigger: ACACCCACCAGCCAGTGGCCATCCACCCGTCGTCTG...AAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp AGTGTTACTCTGGGTGTTGCACACTCCATGATTACTAGAAGACAAACACCTGAGGGGCGGCTCAGTTTCTaGCGGTTCTCAGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SVTLGVAHSMITRRQTPEGRLSF*RFSASS
Trigger: GGAGGAAGCTGAGAACCGCCAGAAACTGAGCCGCCC...CTCAGGTGTTTGTCTTCTAGTAATCATGGAGTGTGCAACACCCAGAGTAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp ACACGTGACAGGATTCAGAAGGTACAAATCAACCTTCACCCAGGAAGCTTACATATTCTGGCGGCATCCTaGGGCGGCTCAGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: TRDRIQKVQINLHPGSLHILAAS*GGSVSG
Trigger: GCCAGAAACTGAGCCGCCCCAGGATGCCGCCAGAAT...ATGTAAGCTTCCTGGGTGAAGGTTGATTTGTACCTTCTGAATCCTGTCACGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp CTCCCAACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTAACAGCACCTCCCTCTaGAAACTTCTACAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LPTHCTCVVRAPGIVLGTNSTSL*KLLQKS
Trigger: TGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTT...AGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGTTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp TGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCACAACTCCGGACAGATaGGACCCTGGAATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: CTSHHMASSNIQPNGSQLTTPDR*DPGMGL
Trigger: CAGCCCCATTCCAGGGTCCCATCTGTCCGGAGTTGT...GAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp ACAAGAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAACGTATCTCAGATGCATaGCCTACTATCACACTGGTC +
Preference number: 4 (lower is better)
Translates to: TRTKGNIQAPQPPVALPERISDA*PTITLV
Trigger: GACCAGTGTGATAGTAGGCCATGCATCTGAGATACG...TTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR TCA 90 bp TGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCGGACGGGGGCGCCATTaGAATACTGAGAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: CTSHHMASSNIQPNGSQLGRGRH*NTERTG
Trigger: ACCTGTTCTCTCAGTATTTCAATGGCGCCCCCGTCC...GAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR TCA 90 bp CAAGAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAACGATGTTGGTTGAAATaGTCACTTTGCGATAGCCCT +
Preference number: 4 (lower is better)
Translates to: QELRATSKLRNLLWPFQKRCWLK*SLCDSP
Trigger: AGGGCTATCGCAAAGTGATCATTTCAACCAACATCG...TTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR TCA 90 bp GACCTGCTGTTTGCAGTCCTGCCCCTTGTAGTGTTACTCTGGGTGTTGCACACTGGAATTTGGGGGACATaGGGATGGTTTTGGCAAATT +
Preference number: 4 (lower is better)
Translates to: DLLFAVLPLVVLLWVLHTGIWGT*GWFWQI
Trigger: AATTTGCCAAAACCATCCTCATGTCCCCCAAATTCC...AGTGTGCAACACCCAGAGTAACACTACAAGGGGCAGGACTGCAAACAGCAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR TCA 90 bp GAGGTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTGAGCAGGGTCATGTaGTCCCCCTCGCTGGATATG +
Preference number: 4 (lower is better)
Translates to: EVRDNSTSLWKLLQKSVLLSRVM*SPSLDM
Trigger: CATATCCAGCGAGGGGGATCACATGACCCTGCTCAA...CAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp AGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGTACAGCTCCCAGGGACCAGTaGTTCTGGCGGCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: SQSHPVRTKSIILRFPGTAPRDQ*FWRHPG
Trigger: CCCAGGATGCCGCCAGAATCACTGGTCCCTGGGAGC...TGTACCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp ACAAGAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAACCGAAAAGAAACAGCTaGAATGGTACACAGTCACTC +
Preference number: 4 (lower is better)
Translates to: TRTKGNIQAPQPPVALPEPKRNS*NGTQSL
Trigger: GAGTGACTGTGTACCATTTCAGCTGTTTCTTTTCGG...TTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR TCA 90 bp CAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCCGTCGGGTGCAAATTTaGGCATTATTTACAAGAGCT +
Preference number: 4 (lower is better)
Translates to: QHPSSATSCGPSRKSPSVRRVQI*ALFTRA
Trigger: AGCTCTTGTAAATAATGCTCAAATTTGCACCCGACG...GACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR GCA 90 bp ATCTGGAGATGGCTTCGACATGAAGTCAAAGGTGAGCACATTTGGGACTTTCATGCTTCGATCTCCTCCTaGCCAGTGAGGAACACCAGG +
Preference number: 4 (lower is better)
Translates to: IWRWLRHEVKGEHIWDFHASISS*PVRNTR
Trigger: CCTGGTGTTCCTCACTGGGCAGGAGGAGATCGAAGC...ATGAAAGTCCCAAATGTGCTCACCTTTGACTTCATGTCGAAGCCATCTCCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR GCA 90 bp GTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTGACTCGGAGCTGCTGTaGATAGGGCAGGGAGGCGTA +
Preference number: 4 (lower is better)
Translates to: VRDNSTSLWKLLQKSVLFDSELL*IGQGGV
Trigger: TACGCCTCCCTGCCCTATGCACAGCAGCTCCGAGTC...AAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp AGGTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTAGAGCCGGTAGCAGATaGCACTGTCCTCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RYEITAPPSGNFYRSQFCRAGSR*HCPLCQ
Trigger: CTGGCAGAGAGGACAGTGGCATCTGCTACCGGCTCT...ACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp AGTGTTACTCTGGGTGTTGCACACTCCATGATTACTAGAAGACAAACACCTGAGTTCTTGCGGACCCCTTaGACTTCCTCTCGCCGGGAA +
Preference number: 4 (lower is better)
Translates to: SVTLGVAHSMITRRQTPEFLRTP*TSSRRE
Trigger: TTCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAGAA...CTCAGGTGTTTGTCTTCTAGTAATCATGGAGTGTGCAACACCCAGAGTAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR GCA 90 bp TCTCTAAGCGCCAACCTGGAAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCCTGTGCTCTGACTTCTaGTACCAGCGTCATATTCTT +
Preference number: 4 (lower is better)
Translates to: SLSANLEACCKDNCSPSSLCSDF*YQRHIL
Trigger: AAGAATATGACGCTGGTAGCAGAAGTCAGAGCACAG...GGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGCGCTTAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
ENST00000574023.1
CDS-3UTR GCA 90 bp GTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTCCGTGGTGGCATAGGTaGCATCTGGCTGAAGCTCGG +
Preference number: 4 (lower is better)
Translates to: VRDNSTSLWKLLQKSVLFPWWHR*HLAEAR
Trigger: CCGAGCTTCAGCCAGATGGCACCTATGCCACCACGG...AAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp ATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCACTGTACGTGTGTCGGGAGTTGAGCAAAGATaGTTTCACGCTCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: MASSNIQPNGSQLTVRVSGVEQR*FHAPGS
Trigger: ACTTCCAGGAGCGTGAAAGCATCTTTGCTCAACTCC...CGACACACGTACAGTGAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp CTAAGAGGAACCGTTAGTGCCTTTTCTCTGCTCAGAATATCAGAACAGGAACAGGCTTCCTGGTGGATCTaGAAGACGGAGACAAGCGCG +
Preference number: 4 (lower is better)
Translates to: LRGTVSAFSLLRISEQEQASWWI*KTETSA
Trigger: CGCGCTTGTCTCCGTCTTCCAGATCCACCAGGAAGC...CTGTTCCTGTTCTGATATTCTGAGCAGAGAAAAGGCACTAACGGTTCCTCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp AACAGGTCCACATCCATCGTAGCTGACATCACAATCACTTTCAGAGGAAGTTTCGGCACGTCTTGCTCATaGCTTCGATCTCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: NRSTSIVADITITFRGSFGTSCS*LRSPPA
Trigger: GGCAGGAGGAGATCGAAGCCATGAGCAAGACGTGCC...GAAACTTCCTCTGAAAGTGATTGTGATGTCAGCTACGATGGATGTGGACCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp CAGCTTCCTCCTAAAGTACTCAGGGGCAGCCTCGTACAGCCACTGTGCATCTATACACCTCTGGATCTCTaGCACGGTCATCTTATCAAA +
Preference number: 4 (lower is better)
Translates to: QLPPKVLRGSLVQPLCIYTPLDL*HGHLIK
Trigger: TTTGATAAGATGACCGTGCCAGAGATCCAGAGGTGT...ATAGATGCACAGTGGCTGTACGAGGCTGCCCCTGAGTACTTTAGGAGGAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp GTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTATTCTGGCGGCATCCTaGGGCGGCTCAGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: VRDNSTSLWKLLQKSVLFILAAS*GGSVSG
Trigger: GCCAGAAACTGAGCCGCCCCAGGATGCCGCCAGAAT...AAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ACAAGAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAACAGCACCTCCCTCTaGAAACTTCTACAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: TRTKGNIQAPQPPVALPENSTSL*KLLQKS
Trigger: TGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTT...TTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp TGTAAGCCCAGATGTGGTGTGGTATCTGGCATAAGCCAATGTTCTCTGGGTTCTGCCTCTTGGGCAGCTTaGCCCCTGGTTATAACTATG +
Preference number: 4 (lower is better)
Translates to: CKPRCGVVSGISQCSLGSASWAA*PLVITM
Trigger: CATAGTTATAACCAGGGGCCAAGCTGCCCAAGAGGC...AGAACCCAGAGAACATTGGCTTATGCCAGATACCACACCACATCTGGGCTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR TCA 90 bp ACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTTTCCATTGGATAGTCCGTTCGTaGGCTTCATCCAAAATGACA +
Preference number: 4 (lower is better)
Translates to: THCTCVVRAPGIVLGTFHWIVRS*ASSKMT
Trigger: TGTCATTTTGGATGAAGCTCACGAACGGACTATCCA...ATGGAAAGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR TCA 90 bp ACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTTTCCATCACATCCATCGTAGCTaGCATCACAATCACTTTCAG +
Preference number: 4 (lower is better)
Translates to: THCTCVVRAPGIVLGTFHHIHRS*HHNHFQ
Trigger: CTGAAAGTGATTGTGATGTCAGCTACGATGGATGTG...ATGGAAAGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR TCA 90 bp GCTGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTTCATTGCTAGAAGCTaGAGCATCACACTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AVLHIIWQAVTFSLTAPNFIARS*SITLAR
Trigger: CCTGGCCAGTGTGATGCTTCAGCTTCTAGCAATGAA...GTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp AGGCATAGTTCTGGGTACTTTCCATTCCTTTTCTCTAAACTTTATGAACCCAATGCTCCCAGGGACCAGTaGTTCTGGCGGCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: RHSSGYFPFLFSKLYEPNAPRDQ*FWRHPG
Trigger: CCCAGGATGCCGCCAGAATCACTGGTCCCTGGGAGC...ATTGGGTTCATAAAGTTTAGAGAAAAGGAATGGAAAGTACCCAGAACTATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp ACTTGGGATATTGCTGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAAGAAGGGGCTTCCGATaGGGACCGCGTTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TWDIAVLHIIWQAVTFSLRRGFR*GPRCPG
Trigger: ACCTGGACAACGCGGTCCTCATCGGAAGCCCCTTCT...TAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACAGCAATATCCCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433302.7
CDS-3UTR GCA 90 bp TCACAATCACTTTCAGAGGAAGTTTCCCGAGTTCCTTTCTCCTCTTCTGTGCAGTGTCTCGGCACGTCTTaGTCATGGCTTCGATCTCCT +
Preference number: 4 (lower is better)
Translates to: SQSLSEEVSRVPFSSSVQCLGTS*SWLRSP
Trigger: AGGAGATCGAAGCCATGAGCAAGACGTGCCGAGACA...CTGCACAGAAGAGGAGAAAGGAACTCGGGAAACTTCCTCTGAAAGTGATTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR GCA 90 bp GAGGTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGAGCCTCCCATCCCAATaGTGGGATTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: EVRDNSTSLWKLLQKSVLSLPSQ*WDYRHE
Trigger: CTCATGCCTGTAATCCCAGCATTGGGATGGGAGGCT...CAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR GCA 90 bp CAAGAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAACTGAGGCATGCAATCTaGTTGGAGTGCATCTATTTA +
Preference number: 4 (lower is better)
Translates to: QELRATSKLRNLLWPFQKLRHAI*LECIYL
Trigger: TAAATAGATGCACTCCAAGCAGATTGCATGCCTCAG...TTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp ATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGCGGAGGTCCAGAGCCTaGCCGGAATCTCTTGGCCGG +
Preference number: 4 (lower is better)
Translates to: IKSKSPSKNQKHNFEVSRRRSRA*PESLGR
Trigger: CCGGCCAAGAGATTCCGGCCAGGCTCTGGACCTCCG...CCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000433302.7
CDS-3UTR CCA 90 bp AGTGTTACTCTGGGTGTTGCACACTCCATGATTACTAGAAGACAAACACCTGAGGAAGGGGCTTCCTGGTaGATCTGGAAGACGGAGACA +
Preference number: 4 (lower is better)
Translates to: SVTLGVAHSMITRRQTPEEGASW*IWKTET
Trigger: TGTCTCCGTCTTCCAGATCCACCAGGAAGCCCCTTC...CTCAGGTGTTTGTCTTCTAGTAATCATGGAGTGTGCAACACCCAGAGTAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp ATCTGGAGATGGCTTCGACATGAAGTCAAAGGTGAGCACATTTGGGACTTTCATGAAGGGGCTTCCTGGTaGATCTGGAAGACGGAGACA +
Preference number: 4 (lower is better)
Translates to: IWRWLRHEVKGEHIWDFHEGASW*IWKTET
Trigger: TGTCTCCGTCTTCCAGATCCACCAGGAAGCCCCTTC...ATGAAAGTCCCAAATGTGCTCACCTTTGACTTCATGTCGAAGCCATCTCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp AACAGGTCCACATCCATCGTAGCTGACATCACAATCACTTTCAGAGGAAGTTTCGAAGAAGGGGCTTCCTaGTGGATCTGGAAGACGGAG +
Preference number: 4 (lower is better)
Translates to: NRSTSIVADITITFRGSFEEGAS*WIWKTE
Trigger: CTCCGTCTTCCAGATCCACCAGGAAGCCCCTTCTTC...GAAACTTCCTCTGAAAGTGATTGTGATGTCAGCTACGATGGATGTGGACCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp AGTGTTACTCTGGGTGTTGCACACTCCATGATTACTAGAAGACAAACACCTGAGTTTGCGATAGCCCTTTaGGGCCCCTTGGAAGACTCG +
Preference number: 4 (lower is better)
Translates to: SVTLGVAHSMITRRQTPEFAIAL*GPLEDS
Trigger: CGAGTCTTCCAAGGGGCCCCAAAGGGCTATCGCAAA...CTCAGGTGTTTGTCTTCTAGTAATCATGGAGTGTGCAACACCCAGAGTAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp ATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCACTGTACGTGTGTCGACACCTCTGGATCTCTaGCACGGTCATCTTATCAAA +
Preference number: 4 (lower is better)
Translates to: MASSNIQPNGSQLTVRVSTPLDL*HGHLIK
Trigger: TTTGATAAGATGACCGTGCCAGAGATCCAGAGGTGT...CGACACACGTACAGTGAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp AGGTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTGCCAGGTTACACCTCTaGATCTCTGGCACGGTCATC +
Preference number: 4 (lower is better)
Translates to: RYEITAPPSGNFYRSQFCARLHL*ISGTVI
Trigger: GATGACCGTGCCAGAGATCCAGAGGTGTAACCTGGC...ACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp CAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCAATGTGATCTGGAGATaGCTTCGACATGAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: QHPSSATSCGPSRKSPSVNVIWR*LRHEVK
Trigger: TTTGACTTCATGTCGAAGCCATCTCCAGATCACATT...GACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp CATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAAATGTGATCTGGAGATaGCTTCGACATGAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: HPSSATSCGPSRKSPSVTNVIWR*LRHEVK
Trigger: TTTGACTTCATGTCGAAGCCATCTCCAGATCACATT...TGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp GTCAGGATCTCCTCTGTACAGTGGAATTTGGGGGACATGAGGATGGTTTTGGCACATCTTTCTTCCCATTaGAGTCAGGGTAAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: VRISSVQWNLGDMRMVLAHLSSH*SQGKLV
Trigger: GACCAGCTTACCCTGACTCCAATGGGAAGAAAGATG...TGCCAAAACCATCCTCATGTCCCCCAAATTCCACTGTACAGAGGAGATCCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp GCTCCAGGCATAGTTCTGGGTACTTTCCATTCCTTTTCTCTAAACTTTATGAACCGGGAAGGAGGGTTGTaGAGGACGCTGTCCACAGAC +
Preference number: 4 (lower is better)
Translates to: APGIVLGTFHSFSLNFMNREGGL*RTLSTD
Trigger: GTCTGTGGACAGCGTCCTCCACAACCCTCCTTCCCG...GTTCATAAAGTTTAGAGAAAAGGAATGGAAAGTACCCAGAACTATGCCTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp TACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTGCTGGTGGGTGTCCGTaGTGGCATAGGTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: YEITAPPSGNFYRSQFCFAGGCP*WHRCHL
Trigger: CAGATGGCACCTATGCCACCACGGACACCCACCAGC...AAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTCTATTTCGGGTGGATGGCCACTaGCTGGTGGGTGTCCGTGGT +
Preference number: 4 (lower is better)
Translates to: ITAPPSGNFYRSQFCFLFRVDGH*LVGVRG
Trigger: ACCACGGACACCCACCAGCCAGTGGCCATCCACCCG...AAATAGAAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ACTTGGGATATTGCTGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAGGGCGGCTCAGTTTCTaGCGGTTCTCAGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TWDIAVLHIIWQAVTFSLGRLSF*RFSASS
Trigger: GGAGGAAGCTGAGAACCGCCAGAAACTGAGCCGCCC...TAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACAGCAATATCCCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp TGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCATGCTTTCACGCTCCTaGAAGTCAGGCACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: CTSHHMASSNIQPNGSQLMLSRS*KSGTFS
Trigger: GCTGAAGGTGCCTGACTTCCAGGAGCGTGAAAGCAT...GAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ACTTGGGATATTGCTGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAAGCCTCCCCGGTAGCTaGGATTACAGGCGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: TWDIAVLHIIWQAVTFSLSLPGS*DYRRVP
Trigger: TGGCACACGCCTGTAATCCCAGCTACCGGGGAGGCT...TAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACAGCAATATCCCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp TCTCTAAGCGCCAACCTGGAAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCATGGGTTTCGTAGGTTaGCAAAGAGTTATCACACCA +
Preference number: 4 (lower is better)
Translates to: SLSANLEACCKDNCSPSSMGFVG*QRVITP
Trigger: TGGTGTGATAACTCTTTGCCAACCTACGAAACCCAT...GGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGCGCTTAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR CAA 72 bp TACAGTACATCATCAGTTTCACCCACAGGGCAGAACTaGCCTCCATTCAGGCATCTCTTTACAACTGGCAGC +
Preference number: 4 (lower is better)
Translates to: YSTSSVSPTGQN*PPFRHLFTTGS
Trigger: GCTGCCAGTTGTAAAGAGATGCCTGAATGGAGGCAAGTTCTGCCCTGTGGGTGAAACTGATGATGTACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR TCA 90 bp TCACAATCACTTTCAGAGGAAGTTTCCCGAGTTCCTTTCTCCTCTTCTGTGCAGGATCCTGGTGTCTTCTaGGGTGACATCATCAAAGCG +
Preference number: 4 (lower is better)
Translates to: SQSLSEEVSRVPFSSSVQDPGVF*GDIIKA
Trigger: CGCTTTGATGATGTCACCTCAGAAGACACCAGGATC...CTGCACAGAAGAGGAGAAAGGAACTCGGGAAACTTCCTCTGAAAGTGATTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR TCA 90 bp GTCAGGATCTCCTCTGTACAGTGGAATTTGGGGGACATGAGGATGGTTTTGGCATGGATAGTCCGTTCGTaGGCTTCATCCAAAATGACA +
Preference number: 4 (lower is better)
Translates to: VRISSVQWNLGDMRMVLAWIVRS*ASSKMT
Trigger: TGTCATTTTGGATGAAGCTCACGAACGGACTATCCA...TGCCAAAACCATCCTCATGTCCCCCAAATTCCACTGTACAGAGGAGATCCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR TCA 90 bp GAGACACAAGCGTTCAGTAGGGATCGCCATCCCAGGAGGTACGAGATAACAGCATTCAGCGATGTTGGTTaGAATGATCACTTTGCGATA +
Preference number: 4 (lower is better)
Translates to: ETQAFSRDRHPRRYEITAFSDVG*NDHFAI
Trigger: TATCGCAAAGTGATCATTTCAACCAACATCGCTGAA...TGCTGTTATCTCGTACCTCCTGGGATGGCGATCCCTACTGAACGCTTGTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR TCA 90 bp TCTCTAAGCGCCAACCTGGAAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCTTCAGCGATGTTGGTTaGAATGATCACTTTGCGATA +
Preference number: 4 (lower is better)
Translates to: SLSANLEACCKDNCSPSSFSDVG*NDHFAI
Trigger: TATCGCAAAGTGATCATTTCAACCAACATCGCTGAA...GGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGCGCTTAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000572490.1
ENST00000574023.1
CDS-3UTR TCA 90 bp GGCTCAGGTGTTAAATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTCTCATGAAGAGGCTGTaGGCCAGGCAGCGGCGGACA +
Preference number: 4 (lower is better)
Translates to: GSGVKLSQSHPVRTKSIILMKRL*ARQRRT
Trigger: TGTCCGCCGCTGCCTGGCTCACAGCCTCTTCATGAG...AATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAATTTAACACCTGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp TGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCTCAGGCACCTTCAGCTaGTTCCAAGGCTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: CTSHHMASSNIQPNGSQLSGTFS*FQGFSK
Trigger: CTTAGAGAAGCCTTGGAATCAGCTGAAGGTGCCTGA...GAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp ACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACGTTTCCAGGTACAAATaGTATGTCCATGTCTATATG +
Preference number: 4 (lower is better)
Translates to: TSKLRNLLWPFQKISLSHVSRYK*YVHVYM
Trigger: CATATAGACATGGACATATCATTTGTACCTGGAAAC...GTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp CTAAGAGGAACCGTTAGTGCCTTTTCTCTGCTCAGAATATCAGAACAGGAACAGGCTCACGGGAGCTGGTaGTTCTTCCAGATATGGGTT +
Preference number: 4 (lower is better)
Translates to: LRGTVSAFSLLRISEQEQAHGSW*FFQIWV
Trigger: AACCCATATCTGGAAGAATCACCAGCTCCCGTGAGC...CTGTTCCTGTTCTGATATTCTGAGCAGAGAAAAGGCACTAACGGTTCCTCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR GCA 90 bp GCTCCAGGCATAGTTCTGGGTACTTTCCATTCCTTTTCTCTAAACTTTATGAACGCTTCGATCTCCTCCTaGCCAGTGAGGAACACCAGG +
Preference number: 4 (lower is better)
Translates to: APGIVLGTFHSFSLNFMNASISS*PVRNTR
Trigger: CCTGGTGTTCCTCACTGGGCAGGAGGAGATCGAAGC...GTTCATAAAGTTTAGAGAAAAGGAATGGAAAGTACCCAGAACTATGCCTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp TACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTGCTTCGATCTCCTCCTaGCCAGTGAGGAACACCAGG +
Preference number: 4 (lower is better)
Translates to: YEITAPPSGNFYRSQFCFASISS*PVRNTR
Trigger: CCTGGTGTTCCTCACTGGGCAGGAGGAGATCGAAGC...AAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp AGGTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTGTCTCGGCACGTCTTaGTCATGGCTTCGATCTCCT +
Preference number: 4 (lower is better)
Translates to: RYEITAPPSGNFYRSQFCCLGTS*SWLRSP
Trigger: AGGAGATCGAAGCCATGAGCAAGACGTGCCGAGACA...ACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp AGGCATAGTTCTGGGTACTTTCCATTCCTTTTCTCTAAACTTTATGAACCCAATGCCCTCCCTGTGCGCTaGCAAGCCTGCGTCTTCGAT +
Preference number: 4 (lower is better)
Translates to: RHSSGYFPFLFSKLYEPNALPVR*QACVFD
Trigger: ATCGAAGACGCAGGCTTGGCAGCGCACAGGGAGGGC...ATTGGGTTCATAAAGTTTAGAGAAAAGGAATGGAAAGTACCCAGAACTATGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp GCTCCAGGCATAGTTCTGGGTACTTTCCATTCCTTTTCTCTAAACTTTATGAACAGAGCCGGTAGCAGATaGCACTGTCCTCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: APGIVLGTFHSFSLNFMNRAGSR*HCPLCQ
Trigger: CTGGCAGAGAGGACAGTGGCATCTGCTACCGGCTCT...GTTCATAAAGTTTAGAGAAAAGGAATGGAAAGTACCCAGAACTATGCCTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp GCTCCAGGCATAGTTCTGGGTACTTTCCATTCCTTTTCTCTAAACTTTATGAACTTCTTGCGGACCCCTTaGACTTCCTCTCGCCGGGAA +
Preference number: 4 (lower is better)
Translates to: APGIVLGTFHSFSLNFMNFLRTP*TSSRRE
Trigger: TTCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAGAA...GTTCATAAAGTTTAGAGAAAAGGAATGGAAAGTACCCAGAACTATGCCTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp GCTCCAGGCATAGTTCTGGGTACTTTCCATTCCTTTTCTCTAAACTTTATGAACGGCACGTCTTGCTCATaGCTTCGATCTCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: APGIVLGTFHSFSLNFMNGTSCS*LRSPPA
Trigger: GGCAGGAGGAGATCGAAGCCATGAGCAAGACGTGCC...GTTCATAAAGTTTAGAGAAAAGGAATGGAAAGTACCCAGAACTATGCCTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ATCTGGAGATGGCTTCGACATGAAGTCAAAGGTGAGCACATTTGGGACTTTCATGCTGAAGCATCACACTaGCCAGGTTACACCTCTGGA +
Preference number: 4 (lower is better)
Translates to: IWRWLRHEVKGEHIWDFHAEASH*PGYTSG
Trigger: TCCAGAGGTGTAACCTGGCCAGTGTGATGCTTCAGC...ATGAAAGTCCCAAATGTGCTCACCTTTGACTTCATGTCGAAGCCATCTCCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp AAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTTGGTTTTGGCAAATTTaGGTTCTAAAGGAAATGCTG +
Preference number: 4 (lower is better)
Translates to: KGNIQAPQPPVALPENLPWFWQI*VLKEML
Trigger: CAGCATTTCCTTTAGAACCCAAATTTGCCAAAACCA...AGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp AGGCATAGTTCTGGGTACTTTCCATTCCTTTTCTCTAAACTTTATGAACCCAATAGGACAGACGACGGGTaGATGGCCACTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RHSSGYFPFLFSKLYEPNRTDDG*MATGWW
Trigger: CCACCAGCCAGTGGCCATCCACCCGTCGTCTGTCCT...ATTGGGTTCATAAAGTTTAGAGAAAAGGAATGGAAAGTACCCAGAACTATGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTCTATTTCAGGCCGGCTTGCAGTaGAAGAGGACAGACGACGGG +
Preference number: 4 (lower is better)
Translates to: ITAPPSGNFYRSQFCFLFQAGLQ*KRTDDG
Trigger: CCCGTCGTCTGTCCTCTTCCACTGCAAGCCGGCCTG...AAATAGAAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGCAGGCCGGCTTGCAGTaGAAGAGGACAGACGACGGG +
Preference number: 4 (lower is better)
Translates to: IKSKSPSKNQKHNFEVSRQAGLQ*KRTDDG
Trigger: CCCGTCGTCTGTCCTCTTCCACTGCAAGCCGGCCTG...CCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp TGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCAGGAGGCTCCTTTACTaGTCTCTGCTTGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: CTSHHMASSNIQPNGSQLRRLLY*SLLGDR
Trigger: TCTGTCTCCAAGCAGAGACCAGTAAAGGAGCCTCCT...GAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp GCTCCAGGCATAGTTCTGGGTACTTTCCATTCCTTTTCTCTAAACTTTATGAACGTCTTTGGGGCCCCTTaGAAGACTCGGAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: APGIVLGTFHSFSLNFMNVFGAP*KTRSCC
Trigger: ACAGCAGCTCCGAGTCTTCCAAGGGGCCCCAAAGAC...GTTCATAAAGTTTAGAGAAAAGGAATGGAAAGTACCCAGAACTATGCCTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433302.7
CDS-3UTR TCA 90 bp AGGTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTCAGGCACCTTCAGCTaGTTCCAAGGCTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: RYEITAPPSGNFYRSQFCSGTFS*FQGFSK
Trigger: CTTAGAGAAGCCTTGGAATCAGCTGAAGGTGCCTGA...ACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp GACCTGCTGTTTGCAGTCCTGCCCCTTGTAGTGTTACTCTGGGTGTTGCACACTGTTTCCAGGTACAAATaGTATGTCCATGTCTATATG +
Preference number: 4 (lower is better)
Translates to: DLLFAVLPLVVLLWVLHTVSRYK*YVHVYM
Trigger: CATATAGACATGGACATATCATTTGTACCTGGAAAC...AGTGTGCAACACCCAGAGTAACACTACAAGGGGCAGGACTGCAAACAGCAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR TCA 90 bp CAAGAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAGTTTCCAGGTACAAATaGTATGTCCATGTCTATATG +
Preference number: 4 (lower is better)
Translates to: QELRATSKLRNLLWPFQKVSRYK*YVHVYM
Trigger: CATATAGACATGGACATATCATTTGTACCTGGAAAC...TTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp CATCAGGCCACAGCTTCCAGAAAGAGAGCATCCATGATCTCTGAAGAGCCTCTTGTGTTGCACACTCCATaGTTACTAGAAGACAAACAC +
Preference number: 4 (lower is better)
Translates to: HQATASRKRASMISEEPLVLHTP*LLEDKH
Trigger: GTGTTTGTCTTCTAGTAATCATGGAGTGTGCAACAC...AAGAGGCTCTTCAGAGATCATGGATGCTCTCTTTCTGGAAGCTGTGGCCTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR GCA 90 bp ATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTCTATTTAGCAGCATCACCACTTaGCTCCCGGGAGGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: ITAPPSGNFYRSQFCFLFSSITT*LPGGKD
Trigger: GTCCTTCCCTCCCGGGAGGCAAGTGGTGATGCTGCT...AAATAGAAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000433302.7
CDS-3UTR GCA 90 bp ATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGAGCTGGGCCAACAGTTaGCCCCGCGCTTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: IKSKSPSKNQKHNFEVSRSWANS*PRAWKM
Trigger: CATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCT...CCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp ATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGCCGTGGTGGCATAGGTaGCATCTGGCTGAAGCTCGG +
Preference number: 4 (lower is better)
Translates to: IKSKSPSKNQKHNFEVSRPWWHR*HLAEAR
Trigger: CCGAGCTTCAGCCAGATGGCACCTATGCCACCACGG...CCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp ATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTCTATTTCCGTGGTGGCATAGGTaGCATCTGGCTGAAGCTCGG +
Preference number: 4 (lower is better)
Translates to: ITAPPSGNFYRSQFCFLFPWWHR*HLAEAR
Trigger: CCGAGCTTCAGCCAGATGGCACCTATGCCACCACGG...AAATAGAAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp ATCTGGAGATGGCTTCGACATGAAGTCAAAGGTGAGCACATTTGGGACTTTCATGCCAACCTGGAAGCCTaGTGTAAGGACAACTGTAGT +
Preference number: 4 (lower is better)
Translates to: IWRWLRHEVKGEHIWDFHANLEA*CKDNCS
Trigger: ACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGC...ATGAAAGTCCCAAATGTGCTCACCTTTGACTTCATGTCGAAGCCATCTCCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp ATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTCTATTTCGCAGGGCAGCCGTCTaGGAGGTGCTTTGCAATGTC +
Preference number: 4 (lower is better)
Translates to: ITAPPSGNFYRSQFCFLFRRAAV*EVLCNV
Trigger: GACATTGCAAAGCACCTCCCAGACGGCTGCCCTGCG...AAATAGAAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ACTTGGGATATTGCTGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTATTTGCGATAGCCCTTTaGGGCCCCTTGGAAGACTCG +
Preference number: 4 (lower is better)
Translates to: TWDIAVLHIIWQAVTFSLFAIAL*GPLEDS
Trigger: CGAGTCTTCCAAGGGGCCCCAAAGGGCTATCGCAAA...TAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACAGCAATATCCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR CCA 90 bp GAGGTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGCATCTTTCTTCCCATTaGAGTCAGGGTAAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: EVRDNSTSLWKLLQKSVLHLSSH*SQGKLV
Trigger: GACCAGCTTACCCTGACTCCAATGGGAAGAAAGATG...CAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGATTCTGGCGGCATCCTaGGGCGGCTCAGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: IKSKSPSKNQKHNFEVSRILAAS*GGSVSG
Trigger: GCCAGAAACTGAGCCGCCCCAGGATGCCGCCAGAAT...CCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp GCTGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACAACAGCACCTCCCTCTaGAAACTTCTACAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: AVLHIIWQAVTFSLTAPNNSTSL*KLLQKS
Trigger: TGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTT...GTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR CAA 72 bp GAGACAATGGTCAGGATCTCCTCTGTACAGTGGAATTaGGGGGACATGAGGATGGTTTTGGCAAATTTGGGT +
Preference number: 4 (lower is better)
Translates to: ETMVRISSVQWN*GDMRMVLANLG
Trigger: ACCCAAATTTGCCAAAACCATCCTCATGTCCCCCAAATTCCACTGTACAGAGGAGATCCTGACCATTGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR TCA 90 bp ATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTCTATTTTCTCCTCCTGCCCAGTaGGGAACACCAGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: ITAPPSGNFYRSQFCFLFSPPAQ*GTPGCP
Trigger: AGGACATCCTGGTGTTCCTCACTGGGCAGGAGGAGA...AAATAGAAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp GAGTCTGAAATTGCTTCACGCAGAAGCATGCCATCTGTCAGAAACTTGATCCTGGGAATTTGGGGGACATaGGGATGGTTTTGGCAAATT +
Preference number: 4 (lower is better)
Translates to: ESEIASRRSMPSVRNLILGIWGT*GWFWQI
Trigger: AATTTGCCAAAACCATCCTCATGTCCCCCAAATTCC...CAGGATCAAGTTTCTGACAGATGGCATGCTTCTGCGTGAAGCAATTTCAGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR TCA 90 bp AGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGTACATTGAGCAGGGTCATGTaGTCCCCCTCGCTGGATATG +
Preference number: 4 (lower is better)
Translates to: SQSHPVRTKSIILRFPGTLSRVM*SPSLDM
Trigger: CATATCCAGCGAGGGGGATCACATGACCCTGCTCAA...TGTACCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp AGTGTTACTCTGGGTGTTGCACACTCCATGATTACTAGAAGACAAACACCTGAGTCCCATGTCTACACGTaGCAGGATTCAGAAGGTACA +
Preference number: 4 (lower is better)
Translates to: SVTLGVAHSMITRRQTPESHVYT*QDSEGT
Trigger: TGTACCTTCTGAATCCTGTCACGTGTAGACATGGGA...CTCAGGTGTTTGTCTTCTAGTAATCATGGAGTGTGCAACACCCAGAGTAACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR TCA 90 bp GAGGTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGGTTGGAAATAAAGACTaGGCCGGACTTGACATACAC +
Preference number: 4 (lower is better)
Translates to: EVRDNSTSLWKLLQKSVLVGNKD*AGLDIH
Trigger: GTGTATGTCAAGTCCGGCTCAGTCTTTATTTCCAAC...CAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR TCA 90 bp TGTAAGCCCAGATGTGGTGTGGTATCTGGCATAAGCCAATGTTCTCTGGGTTCTACGTATAACCATTTCTaGCAGACAGCCCTAAACACT +
Preference number: 4 (lower is better)
Translates to: CKPRCGVVSGISQCSLGSTYNHF*QTALNT
Trigger: AGTGTTTAGGGCTGTCTGTCAGAAATGGTTATACGT...AGAACCCAGAGAACATTGGCTTATGCCAGATACCACACCACATCTGGGCTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR GCA 90 bp ATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGGCTTCGATCTCCTCCTaGCCAGTGAGGAACACCAGG +
Preference number: 4 (lower is better)
Translates to: IKSKSPSKNQKHNFEVSRASISS*PVRNTR
Trigger: CCTGGTGTTCCTCACTGGGCAGGAGGAGATCGAAGC...CCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp TACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTGTCTGGGAGGTGCTTTaGAATGTCTCGGCACGTCTT +
Preference number: 4 (lower is better)
Translates to: YEITAPPSGNFYRSQFCFVWEVL*NVSARL
Trigger: AAGACGTGCCGAGACATTGCAAAGCACCTCCCAGAC...AAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp CTTCCCATTGGAGTCAGGGTAAGCTGGTCATCCTTATGTTCAAGAGCACCTAACAGGGTTATACTTCTTTaGTTTAACCATGCCCGTGTC +
Preference number: 4 (lower is better)
Translates to: LPIGVRVSWSSLCSRAPNRVILL*FNHARV
Trigger: GACACGGGCATGGTTAAAGCAAAGAAGTATAACCCT...GTTAGGTGCTCTTGAACATAAGGATGACCAGCTTACCCTGACTCCAATGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR GCA 90 bp GGCTCAGGTGTTAAATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTCTTGCGGACCCCTTaGACTTCCTCTCGCCGGGAA +
Preference number: 4 (lower is better)
Translates to: GSGVKLSQSHPVRTKSIIFLRTP*TSSRRE
Trigger: TTCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAGAA...AATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAATTTAACACCTGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp GAGGTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGCTGTGCTCTGACTTCTaGTACCAGCGTCATATTCTT +
Preference number: 4 (lower is better)
Translates to: EVRDNSTSLWKLLQKSVLLCSDF*YQRHIL
Trigger: AAGAATATGACGCTGGTAGCAGAAGTCAGAGCACAG...CAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp ACTTGGGATATTGCTGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTACTCGTACAGCCACTGTaGATCTATGACGCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: TWDIAVLHIIWQAVTFSLLVQPL*IYDAEV
Trigger: GACCTCTGCGTCATAGATGCACAGTGGCTGTACGAG...TAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACAGCAATATCCCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp TGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCCCGCATGTTCACTGGTaGCCAGTTAGAGAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: CTSHHMASSNIQPNGSQLPHVHW*PVREKN
Trigger: ATTTTTCTCTCTAACTGGGCACCAGTGAACATGCGG...GAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR GCA 90 bp GCTCCAGGCATAGTTCTGGGTACTTTCCATTCCTTTTCTCTAAACTTTATGAACTTCAAGCAATTCTTGTaGCTCAGCCTCCCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: APGIVLGTFHSFSLNFMNFKQFL*LSLPGS
Trigger: GCTACCGGGGAGGCTGAGGCACAAGAATTGCTTGAA...GTTCATAAAGTTTAGAGAAAAGGAATGGAAAGTACCCAGAACTATGCCTGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp GGCTCAGGTGTTAAATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTGCTACTCGACGAGGCTaGGTCACAGCAATGATGCCC +
Preference number: 4 (lower is better)
Translates to: GSGVKLSQSHPVRTKSIIATRRG*VTAMMP
Trigger: GGGCATCATTGCTGTGACCCAGCCTCGTCGAGTAGC...AATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAATTTAACACCTGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp ATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGGCTTCCTGGTGGATCTaGAAGACGGAGACAAGCGCG +
Preference number: 4 (lower is better)
Translates to: IKSKSPSKNQKHNFEVSRASWWI*KTETSA
Trigger: CGCGCTTGTCTCCGTCTTCCAGATCCACCAGGAAGC...CCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR CCA 90 bp AGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGTACAGAAGAAGGGGCTTCCTaGTGGATCTGGAAGACGGAG +
Preference number: 4 (lower is better)
Translates to: SQSHPVRTKSIILRFPGTEEGAS*WIWKTE
Trigger: CTCCGTCTTCCAGATCCACCAGGAAGCCCCTTCTTC...TGTACCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR CCA 90 bp AGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGTACAGCCAGGTTACACCTCTaGATCTCTGGCACGGTCATC +
Preference number: 4 (lower is better)
Translates to: SQSHPVRTKSIILRFPGTARLHL*ISGTVI
Trigger: GATGACCGTGCCAGAGATCCAGAGGTGTAACCTGGC...TGTACCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ACTTGGGATATTGCTGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAGCTGAAGCATCACACTaGCCAGGTTACACCTCTGGA +
Preference number: 4 (lower is better)
Translates to: TWDIAVLHIIWQAVTFSLAEASH*PGYTSG
Trigger: TCCAGAGGTGTAACCTGGCCAGTGTGATGCTTCAGC...TAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACAGCAATATCCCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp TGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCGGAGTCAGGGTAAGCTaGTCATCCTTATGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: CTSHHMASSNIQPNGSQLGVRVS*SSLCSR
Trigger: TCTTGAACATAAGGATGACCAGCTTACCCTGACTCC...GAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ACACGTGACAGGATTCAGAAGGTACAAATCAACCTTCACCCAGGAAGCTTACATATCTCCTCTGTACAGTaGAATTTGGGGGACATGAGG +
Preference number: 4 (lower is better)
Translates to: TRDRIQKVQINLHPGSLHISSVQ*NLGDMR
Trigger: CCTCATGTCCCCCAAATTCCACTGTACAGAGGAGAT...ATGTAAGCTTCCTGGGTGAAGGTTGATTTGTACCTTCTGAATCCTGTCACGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp ATCTGGAGATGGCTTCGACATGAAGTCAAAGGTGAGCACATTTGGGACTTTCATATCTCCTCTGTACAGTaGAATTTGGGGGACATGAGG +
Preference number: 4 (lower is better)
Translates to: IWRWLRHEVKGEHIWDFHISSVQ*NLGDMR
Trigger: CCTCATGTCCCCCAAATTCCACTGTACAGAGGAGAT...ATGAAAGTCCCAAATGTGCTCACCTTTGACTTCATGTCGAAGCCATCTCCAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CCA 90 bp GCTCCAGGCATAGTTCTGGGTACTTTCCATTCCTTTTCTCTAAACTTTATGAACATGCTTTCACGCTCCTaGAAGTCAGGCACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: APGIVLGTFHSFSLNFMNMLSRS*KSGTFS
Trigger: GCTGAAGGTGCCTGACTTCCAGGAGCGTGAAAGCAT...GTTCATAAAGTTTAGAGAAAAGGAATGGAAAGTACCCAGAACTATGCCTGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp CATCAGGCCACAGCTTCCAGAAAGAGAGCATCCATGATCTCTGAAGAGCCTCTTGTACTTCACATCATATaGCAAGCAGTAACATTCAGC +
Preference number: 4 (lower is better)
Translates to: HQATASRKRASMISEEPLVLHII*QAVTFS
Trigger: GCTGAATGTTACTGCTTGCCATATGATGTGAAGTAC...AAGAGGCTCTTCAGAGATCATGGATGCTCTCTTTCTGGAAGCTGTGGCCTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp TCTCTGAAGAGCCTCTTGGGCAGCTTGGCCCCTGGTTATAACTATGATTCATTCATGTGGTGTGGTATCTaGCATAAGCCAATGTTCTCT +
Preference number: 4 (lower is better)
Translates to: SLKSLLGSLAPGYNYDSFMWCGI*HKPMFS
Trigger: AGAGAACATTGGCTTATGCCAGATACCACACCACAT...GAATGAATCATAGTTATAACCAGGGGCCAAGCTGCCCAAGAGGCTCTTCAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
3UTR CAA 72 bp TGGCCCTTCCAGAAAATCTCCCTCAGTCACAAGAACTaGGGATATTGCTGTACTTCACATCATATGGCAAGC +
Preference number: 4 (lower is better)
Translates to: WPFQKISLSHKN*GYCCTSHHMAS
Trigger: GCTTGCCATATGATGTGAAGTACAGCAATATCCCAAGTTCTTGTGACTGAGGGAGATTTTCTGGAAGGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR CAA 72 bp TTACTAGAAGACAAACACCTGAGGCATGCAATCTGCTaGGAGTGCATCTATTTACATGAAGCTGCTCACGGG +
Preference number: 4 (lower is better)
Translates to: LLEDKHLRHAIC*ECIYLHEAAHG
Trigger: CCCGTGAGCAGCTTCATGTAAATAGATGCACTCCAAGCAGATTGCATGCCTCAGGTGTTTGTCTTCTAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR TCA 90 bp ACACGTGACAGGATTCAGAAGGTACAAATCAACCTTCACCCAGGAAGCTTACATTGGATAGTCCGTTCGTaGGCTTCATCCAAAATGACA +
Preference number: 4 (lower is better)
Translates to: TRDRIQKVQINLHPGSLHWIVRS*ASSKMT
Trigger: TGTCATTTTGGATGAAGCTCACGAACGGACTATCCA...ATGTAAGCTTCCTGGGTGAAGGTTGATTTGTACCTTCTGAATCCTGTCACGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR TCA 90 bp AGGTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTCACATCCATCGTAGCTaGCATCACAATCACTTTCAG +
Preference number: 4 (lower is better)
Translates to: RYEITAPPSGNFYRSQFCHIHRS*HHNHFQ
Trigger: CTGAAAGTGATTGTGATGTCAGCTACGATGGATGTG...ACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR TCA 90 bp TACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTTGGAATGCAGTGGCGTaGTCTTGGCTCACTACAAAC +
Preference number: 4 (lower is better)
Translates to: YEITAPPSGNFYRSQFCFWNAVA*SWLTTN
Trigger: GTTTGTAGTGAGCCAAGATCACGCCACTGCATTCCA...AAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR GCA 90 bp GAGGTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGAGGGTTATACTTCTTTaGTTTAACCATGCCCGTGTC +
Preference number: 4 (lower is better)
Translates to: EVRDNSTSLWKLLQKSVLRVILL*FNHARV
Trigger: GACACGGGCATGGTTAAAGCAAAGAAGTATAACCCT...CAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR GCA 90 bp ATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGTACGTGTGTCGTGCGTaGTCCAGGCATAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: IKSKSPSKNQKHNFEVSRYVCRA*SRHSSG
Trigger: CCCAGAACTATGCCTGGAGCACGCACGACACACGTA...CCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp ATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCACTGTACGTGTGTCGAAGAACTTGGGATATTaGTGTACTTCACATCATATG +
Preference number: 4 (lower is better)
Translates to: MASSNIQPNGSQLTVRVSKNLGY*CTSHHM
Trigger: CATATGATGTGAAGTACAGCAATATCCCAAGTTCTT...CGACACACGTACAGTGAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp AGGCATAGTTCTGGGTACTTTCCATTCCTTTTCTCTAAACTTTATGAACCCAATCACAGTCACTCCTCATaGCCGCATGTTCACTGGTGC +
Preference number: 4 (lower is better)
Translates to: RHSSGYFPFLFSKLYEPNHSHSS*PHVHWC
Trigger: GCACCAGTGAACATGCGGGCATGAGGAGTGACTGTG...ATTGGGTTCATAAAGTTTAGAGAAAAGGAATGGAAAGTACCCAGAACTATGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp ATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGGAAGAAGGGGCTTCCTaGTGGATCTGGAAGACGGAG +
Preference number: 4 (lower is better)
Translates to: IKSKSPSKNQKHNFEVSREEGAS*WIWKTE
Trigger: CTCCGTCTTCCAGATCCACCAGGAAGCCCCTTCTTC...CCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR CCA 90 bp GGCTCAGGTGTTAAATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTGGTCCAGTTGGGCAATaGCCGCCTGAATGTGATCTG +
Preference number: 4 (lower is better)
Translates to: GSGVKLSQSHPVRTKSIIGPVGQ*PPECDL
Trigger: CAGATCACATTCAGGCGGCCATTGCCCAACTGGACC...AATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAATTTAACACCTGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp TACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTACAGCAGGGAGACAATaGTCAGGATCTCCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: YEITAPPSGNFYRSQFCFTAGRQ*SGSPLY
Trigger: GTACAGAGGAGATCCTGACCATTGTCTCCCTGCTGT...AAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ACTTGGGATATTGCTGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAACAGCAGGGAGACAATaGTCAGGATCTCCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: TWDIAVLHIIWQAVTFSLTAGRQ*SGSPLY
Trigger: GTACAGAGGAGATCCTGACCATTGTCTCCCTGCTGT...TAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACAGCAATATCCCAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ACTTGGGATATTGCTGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAAGGAGGCTCCTTTACTaGTCTCTGCTTGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: TWDIAVLHIIWQAVTFSLRRLLY*SLLGDR
Trigger: TCTGTCTCCAAGCAGAGACCAGTAAAGGAGCCTCCT...TAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACAGCAATATCCCAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ACACGTGACAGGATTCAGAAGGTACAAATCAACCTTCACCCAGGAAGCTTACATAACAGGAACAGACTGTaGATATCCTCCAATTCCCTC +
Preference number: 4 (lower is better)
Translates to: TRDRIQKVQINLHPGSLHNRNRL*ISSNSL
Trigger: GAGGGAATTGGAGGATATCCACAGTCTGTTCCTGTT...ATGTAAGCTTCCTGGGTGAAGGTTGATTTGTACCTTCTGAATCCTGTCACGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp TGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCGCATCTCTTTACAACTaGCAGCAATGCAGCATTAAG +
Preference number: 4 (lower is better)
Translates to: CTSHHMASSNIQPNGSQLASLYN*QQCSIK
Trigger: CTTAATGCTGCATTGCTGCCAGTTGTAAAGAGATGC...GAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR TCA 90 bp TACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTCCGAAGCAAAGAGTCTaGAATTGCTTCACGCAGAAG +
Preference number: 4 (lower is better)
Translates to: YEITAPPSGNFYRSQFCFPKQRV*NCFTQK
Trigger: CTTCTGCGTGAAGCAATTTCAGACTCTTTGCTTCGG...AAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR TCA 90 bp TACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTGAAAGAGAGCATCCATaGTCTCTGAAGAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: YEITAPPSGNFYRSQFCFEREHP*SLKSLL
Trigger: CAAGAGGCTCTTCAGAGATCATGGATGCTCTCTTTC...AAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR TCA 90 bp ATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTCTATTTGCCCTAAACACTAGCTaGGAGCTTGACTGCACAGGA +
Preference number: 4 (lower is better)
Translates to: ITAPPSGNFYRSQFCFLFALNTS*ELDCTG
Trigger: TCCTGTGCAGTCAAGCTCTCAGCTAGTGTTTAGGGC...AAATAGAAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR GCA 90 bp ATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTCTATTTTGTCTCGGCACGTCTTaGTCATGGCTTCGATCTCCT +
Preference number: 4 (lower is better)
Translates to: ITAPPSGNFYRSQFCFLFCLGTS*SWLRSP
Trigger: AGGAGATCGAAGCCATGAGCAAGACGTGCCGAGACA...AAATAGAAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp TACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTTCCTTTACTGGTCTCTaGTTGGAGACAGACACAGAG +
Preference number: 4 (lower is better)
Translates to: YEITAPPSGNFYRSQFCFSFTGL*LETDTE
Trigger: CTCTGTGTCTGTCTCCAAGCAGAGACCAGTAAAGGA...AAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp TACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTAGGGTTAGAGAGAGGTaGCTAGCAGTTAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: YEITAPPSGNFYRSQFCFRVRER*LAVRKQ
Trigger: CTGCTTTCTAACTGCTAGGCACCTCTCTCTAACCCT...AAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR GCA 90 bp TCTCTGAAGAGCCTCTTGGGCAGCTTGGCCCCTGGTTATAACTATGATTCATTCTGTCAGATCTTCTTTTaGCCACGTATAACCATTTCT +
Preference number: 4 (lower is better)
Translates to: SLKSLLGSLAPGYNYDSFCQIFF*PRITIS
Trigger: AGAAATGGTTATACGTGGGCAAAAGAAGATCTGACA...GAATGAATCATAGTTATAACCAGGGGCCAAGCTGCCCAAGAGGCTCTTCAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp GAGGTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGAATGTGATCTGGAGATaGCTTCGACATGAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: EVRDNSTSLWKLLQKSVLNVIWR*LRHEVK
Trigger: TTTGACTTCATGTCGAAGCCATCTCCAGATCACATT...CAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp GAGGTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGGTACTTCACATCATATaGCAAGCAGTAACATTCAGC +
Preference number: 4 (lower is better)
Translates to: EVRDNSTSLWKLLQKSVLVLHII*QAVTFS
Trigger: GCTGAATGTTACTGCTTGCCATATGATGTGAAGTAC...CAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp GGCTCAGGTGTTAAATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTGAGACAGACACAGAGTaGTCCACCCTGAGACACAAG +
Preference number: 4 (lower is better)
Translates to: GSGVKLSQSHPVRTKSIIETDTE*STLRHK
Trigger: CTTGTGTCTCAGGGTGGACCACTCTGTGTCTGTCTC...AATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAATTTAACACCTGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR CAA 72 bp AGCTGTGCTCTGACTTCTGCTACCAGCGTCATATTCTaGCTGTTGACAAAATTCTCTTTGCACCAATCCTTA +
Preference number: 4 (lower is better)
Translates to: SCALTSATSVIF*LLTKFSLHQSL
Trigger: TAAGGATTGGTGCAAAGAGAATTTTGTCAACAGCAAGAATATGACGCTGGTAGCAGAAGTCAGAGCACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR TCA 90 bp ATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGGATCCTGGTGTCTTCTaGGGTGACATCATCAAAGCG +
Preference number: 4 (lower is better)
Translates to: IKSKSPSKNQKHNFEVSRDPGVF*GDIIKA
Trigger: CGCTTTGATGATGTCACCTCAGAAGACACCAGGATC...CCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR TCA 90 bp ATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGTTCATTGCTAGAAGCTaGAGCATCACACTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: IKSKSPSKNQKHNFEVSRFIARS*SITLAR
Trigger: CCTGGCCAGTGTGATGCTTCAGCTTCTAGCAATGAA...CCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp ATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGAGGTCCGATAGATATTaGGCAGGGTCATGTGATCCC +
Preference number: 4 (lower is better)
Translates to: IKSKSPSKNQKHNFEVSRRSDRY*AGSCDP
Trigger: GGGATCACATGACCCTGCTCAATATCTATCGGACCT...CCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp ATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTCTATTTGCCAACCTGGAAGCCTaGTGTAAGGACAACTGTAGT +
Preference number: 4 (lower is better)
Translates to: ITAPPSGNFYRSQFCFLFANLEA*CKDNCS
Trigger: ACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGC...AAATAGAAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp GCTGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACAAGAACTTGGGATATTaGTGTACTTCACATCATATG +
Preference number: 4 (lower is better)
Translates to: AVLHIIWQAVTFSLTAPNKNLGY*CTSHHM
Trigger: CATATGATGTGAAGTACAGCAATATCCCAAGTTCTT...GTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp CTAAGAGGAACCGTTAGTGCCTTTTCTCTGCTCAGAATATCAGAACAGGAACAGATATCGTATCTCAGATaGATGGCCTACTATCACACT +
Preference number: 4 (lower is better)
Translates to: LRGTVSAFSLLRISEQEQISYLR*MAYYHT
Trigger: AGTGTGATAGTAGGCCATGCATCTGAGATACGATAT...CTGTTCCTGTTCTGATATTCTGAGCAGAGAAAAGGCACTAACGGTTCCTCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp AGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGTACACGCCTGAATGTGATCTaGAGATGGCTTCGACATGAA +
Preference number: 4 (lower is better)
Translates to: SQSHPVRTKSIILRFPGTRLNVI*RWLRHE
Trigger: TTCATGTCGAAGCCATCTCCAGATCACATTCAGGCG...TGTACCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ACTTGGGATATTGCTGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAGGAGTCAGGGTAAGCTaGTCATCCTTATGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: TWDIAVLHIIWQAVTFSLGVRVS*SSLCSR
Trigger: TCTTGAACATAAGGATGACCAGCTTACCCTGACTCC...TAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACAGCAATATCCCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp TACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTGGAGTCAGGGTAAGCTaGTCATCCTTATGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: YEITAPPSGNFYRSQFCFGVRVS*SSLCSR
Trigger: TCTTGAACATAAGGATGACCAGCTTACCCTGACTCC...AAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp GAGTCTGAAATTGCTTCACGCAGAAGCATGCCATCTGTCAGAAACTTGATCCTGTGGTTTTGGCAAATTTaGGTTCTAAAGGAAATGCTG +
Preference number: 4 (lower is better)
Translates to: ESEIASRRSMPSVRNLILWFWQI*VLKEML
Trigger: CAGCATTTCCTTTAGAACCCAAATTTGCCAAAACCA...CAGGATCAAGTTTCTGACAGATGGCATGCTTCTGCGTGAAGCAATTTCAGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR TCA 90 bp AGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGTACAGGAATTTGGGGGACATaGGGATGGTTTTGGCAAATT +
Preference number: 4 (lower is better)
Translates to: SQSHPVRTKSIILRFPGTGIWGT*GWFWQI
Trigger: AATTTGCCAAAACCATCCTCATGTCCCCCAAATTCC...TGTACCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp ATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTCTATTTTCCTTTACTGGTCTCTaGTTGGAGACAGACACAGAG +
Preference number: 4 (lower is better)
Translates to: ITAPPSGNFYRSQFCFLFSFTGL*LETDTE
Trigger: CTCTGTGTCTGTCTCCAAGCAGAGACCAGTAAAGGA...AAATAGAAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTCTATTTCATCTTTCTTCCCATTaGAGTCAGGGTAAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: ITAPPSGNFYRSQFCFLFHLSSH*SQGKLV
Trigger: GACCAGCTTACCCTGACTCCAATGGGAAGAAAGATG...AAATAGAAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp CTAAGAGGAACCGTTAGTGCCTTTTCTCTGCTCAGAATATCAGAACAGGAACAGTGGTTTTGGCAAATTTaGGTTCTAAAGGAAATGCTG +
Preference number: 4 (lower is better)
Translates to: LRGTVSAFSLLRISEQEQWFWQI*VLKEML
Trigger: CAGCATTTCCTTTAGAACCCAAATTTGCCAAAACCA...CTGTTCCTGTTCTGATATTCTGAGCAGAGAAAAGGCACTAACGGTTCCTCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp ATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGTGGCAACTGTGTATGTaGGAGTCACCTACACACACA +
Preference number: 4 (lower is better)
Translates to: IKSKSPSKNQKHNFEVSRWQLCM*ESPTHT
Trigger: TGTGTGTGTAGGTGACTCCCACATACACAGTTGCCA...CCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR TCA 90 bp AGGCATAGTTCTGGGTACTTTCCATTCCTTTTCTCTAAACTTTATGAACCCAATCGATGTTGGTTGAAATaGTCACTTTGCGATAGCCCT +
Preference number: 4 (lower is better)
Translates to: RHSSGYFPFLFSKLYEPNRCWLK*SLCDSP
Trigger: AGGGCTATCGCAAAGTGATCATTTCAACCAACATCG...ATTGGGTTCATAAAGTTTAGAGAAAAGGAATGGAAAGTACCCAGAACTATGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR GCA 90 bp GGCTCAGGTGTTAAATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTCTGTGCTCTGACTTCTaGTACCAGCGTCATATTCTT +
Preference number: 4 (lower is better)
Translates to: GSGVKLSQSHPVRTKSIILCSDF*YQRHIL
Trigger: AAGAATATGACGCTGGTAGCAGAAGTCAGAGCACAG...AATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAATTTAACACCTGAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR GCA 90 bp GCTCCAGGCATAGTTCTGGGTACTTTCCATTCCTTTTCTCTAAACTTTATGAACTTAGTGCCTTTTCTCTaGTCAGAATATCAGAACAGG +
Preference number: 4 (lower is better)
Translates to: APGIVLGTFHSFSLNFMNLVPFL*SEYQNR
Trigger: CCTGTTCTGATATTCTGAGCAGAGAAAAGGCACTAA...GTTCATAAAGTTTAGAGAAAAGGAATGGAAAGTACCCAGAACTATGCCTGGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR GCA 90 bp GCTCCAGGCATAGTTCTGGGTACTTTCCATTCCTTTTCTCTAAACTTTATGAACGCAATCTGCTTGGAGTaGATCTATTTACATGAAGCT +
Preference number: 4 (lower is better)
Translates to: APGIVLGTFHSFSLNFMNAICLE*IYLHEA
Trigger: AGCTTCATGTAAATAGATGCACTCCAAGCAGATTGC...GTTCATAAAGTTTAGAGAAAAGGAATGGAAAGTACCCAGAACTATGCCTGGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp GGCTCAGGTGTTAAATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTCATTCTGAGGCTGTTTaGTGTAAAACACCTGGATCG +
Preference number: 4 (lower is better)
Translates to: GSGVKLSQSHPVRTKSIIHSEAV*CKTPGS
Trigger: CGATCCAGGTGTTTTACACCAAACAGCCTCAGAATG...AATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAATTTAACACCTGAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR CCA 90 bp AGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGTACAGGCATGCAATCTGCTTaGAGTGCATCTATTTACATG +
Preference number: 4 (lower is better)
Translates to: SQSHPVRTKSIILRFPGTGMQSA*SASIYM
Trigger: CATGTAAATAGATGCACTCCAAGCAGATTGCATGCC...TGTACCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR GCA 90 bp ATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGAGGGTTATACTTCTTTaGTTTAACCATGCCCGTGTC +
Preference number: 4 (lower is better)
Translates to: IKSKSPSKNQKHNFEVSRRVILL*FNHARV
Trigger: GACACGGGCATGGTTAAAGCAAAGAAGTATAACCCT...CCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR GCA 90 bp GTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTGATTTGATCGTCGGGTaGAAATTTGAGCATTATTTA +
Preference number: 4 (lower is better)
Translates to: VRDNSTSLWKLLQKSVLFDLIVG*KFEHYL
Trigger: TAAATAATGCTCAAATTTGCACCCGACGATCAAATC...AAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CCA 90 bp AGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGTACATGGTTTTGGCAAATTTaGGTTCTAAAGGAAATGCTG +
Preference number: 4 (lower is better)
Translates to: SQSHPVRTKSIILRFPGTWFWQI*VLKEML
Trigger: CAGCATTTCCTTTAGAACCCAAATTTGCCAAAACCA...TGTACCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
3UTR CAA 72 bp AGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTaGAGGTTTCCAGGTACAAATGATATGTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: SQSHPVRTKSII*RFPGTNDMSMS
Trigger: AGACATGGACATATCATTTGTACCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR TCA 90 bp AGGCATAGTTCTGGGTACTTTCCATTCCTTTTCTCTAAACTTTATGAACCCAATTCATTCATTAAGAAATaGCAAAACACCCCACAGATG +
Preference number: 4 (lower is better)
Translates to: RHSSGYFPFLFSKLYEPNSFIKK*QNTPQM
Trigger: CATCTGTGGGGTGTTTTGTCATTTCTTAATGAATGA...ATTGGGTTCATAAAGTTTAGAGAAAAGGAATGGAAAGTACCCAGAACTATGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR GCA 90 bp AGGCATAGTTCTGGGTACTTTCCATTCCTTTTCTCTAAACTTTATGAACCCAATAAGAACTTGGGATATTaGTGTACTTCACATCATATG +
Preference number: 4 (lower is better)
Translates to: RHSSGYFPFLFSKLYEPNKNLGY*CTSHHM
Trigger: CATATGATGTGAAGTACAGCAATATCCCAAGTTCTT...ATTGGGTTCATAAAGTTTAGAGAAAAGGAATGGAAAGTACCCAGAACTATGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CCA 90 bp ATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGTATGTGGAGTCAGAATaGGTTTTCCAATCTGATTTA +
Preference number: 4 (lower is better)
Translates to: IKSKSPSKNQKHNFEVSRYVESE*VFQSDL
Trigger: TAAATCAGATTGGAAAACCCATTCTGACTCCACATA...CCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS CCA 90 bp TGGGCAGACTCCGGCGCTGCAGCTCCACAGCTTCAGGGTAGGGACTaGCCGAGGGCTGGGCCAGGGGCGGCTGCTGCCTCCGGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: WADSGAAAPQLQGRD*PRAGPGAAAASGLL
Trigger: GAGGAGGCCGGAGGCAGCAGCCGCCCCTGGCCCAGCCCTCGGCCAGTCCCTACCCTGAAGCTGTGGAGCTGCAGCGCCGGAGTCTGCCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
ENST00000574023.1
CDS GCA 90 bp CGCGGCGGGAGGCGCAAGCGCCGAGAGCTCCTGCCCCCTCTCAGGTaGAGACAACAGGAGCACACCGCCCCTTCCTCGCCGCCACGTGCT +
Preference number: 5 (lower is better)
Translates to: RGGRRKRRELLPPLR*RQQEHTAPSSPPRA
Trigger: AGCACGTGGCGGCGAGGAAGGGGCGGTGTGCTCCTGTTGTCTGCACCTGAGAGGGGGCAGGAGCTCTCGGCGCTTGCGCCTCCCGCCGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS GCA 90 bp TGTCGGGAGGGCACCGCGGCGGGAGGCGCAAGCGCCGAGAGCTCCTaGCCCCTCTCAGGTGCAGACAACAGGAGCACACCGCCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: CREGTAAGGASAESS*PLSGADNRSTPPLP
Trigger: AGGAAGGGGCGGTGTGCTCCTGTTGTCTGCACCTGAGAGGGGGCAGGAGCTCTCGGCGCTTGCGCCTCCCGCCGCGGTGCCCTCCCGACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS GCA 90 bp CCGATGAGGACCGCGTTGTCCAGGTTTCGGAGCTGGGCCAACAGTTaGCCCCGCGCTTGGAAGATGGGCAGACTCCGGCGCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PMRTALSRFRSWANS*PRAWKMGRLRRCSS
Trigger: GGAGCTGCAGCGCCGGAGTCTGCCCATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCTCCGAAACCTGGACAACGCGGTCCTCATCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
ENST00000574023.1
CDS CCA 90 bp GCGTTGTCCAGGTTTCGGAGCTGGGCCAACAGTTGCCCCCGCGCTTaGAAGATGGGCAGACTCCGGCGCTGCAGCTCCACAGCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: ALSRFRSWANSCPRA*KMGRLRRCSSTASG
Trigger: CCCTGAAGCTGTGGAGCTGCAGCGCCGGAGTCTGCCCATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCTCCGAAACCTGGACAACGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
ENST00000574023.1
CDS-3UTR CAA 90 bp TGTACACGACGCAGGCCGGCTTGCAGTGGAAGAGGACAGACGACGGGTGGATGGCAGTTGCCCCCGCGCTaGGAAGATGGGCAGACTCCG +
Preference number: 5 (lower is better)
Translates to: CTRRRPACSGRGQTTGGWQLPPR*EDGQTP
Trigger: CGGAGTCTGCCCATCTTCCAAGCGCGGGGGCAACTG...CCATCCACCCGTCGTCTGTCCTCTTCCACTGCAAGCCGGCCTGCGTCGTGTACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CAA 90 bp TGTACACGACGCAGGCCGGCTTGCAGTGGAAGAGGACAGACGACGGGTGGATGGCGCCGGGAAGGAGGGTaGTGGAGGACGCTGTCCACA +
Preference number: 5 (lower is better)
Translates to: CTRRRPACSGRGQTTGGWRREGG*WRTLST
Trigger: TGTGGACAGCGTCCTCCACAACCCTCCTTCCCGGCG...CCATCCACCCGTCGTCTGTCCTCTTCCACTGCAAGCCGGCCTGCGTCGTGTACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS CCA 90 bp AAGAAGGGGCTTCCGATGAGGACCGCGTTGTCCAGGTTTCGGAGCTaGGCCAACAGTTGCCCCCGCGCTTGGAAGATGGGCAGACTCCGG +
Preference number: 5 (lower is better)
Translates to: KKGLPMRTALSRFRS*ANSCPRAWKMGRLR
Trigger: CCGGAGTCTGCCCATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCTCCGAAACCTGGACAACGCGGTCCTCATCGGAAGCCCCTTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433302.7
CDS-3UTR CAA 90 bp CATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACACCTGGCCGGAATCTCTaGGCCGGCGGGAAGCCCGCC +
Preference number: 5 (lower is better)
Translates to: HPSSATSCGPSRKSPSVTPGRNL*AGGKPA
Trigger: GGCGGGCTTCCCGCCGGCCAAGAGATTCCGGCCAGG...TGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000433302.7
CDS-3UTR CAA 90 bp CCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAAGACCTGGCCGGAATCTCTaGGCCGGCGGGAAGCCCGCC +
Preference number: 5 (lower is better)
Translates to: PSSATSCGPSRKSPSVTRPGRNL*AGGKPA
Trigger: GGCGGGCTTCCCGCCGGCCAAGAGATTCCGGCCAGG...TCTTGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000433302.7
CDS-3UTR CAA 90 bp CTTCTTGCGGACCCCTTGCACTTCCTCTCGCCGGGAAGGAGGGTTGTGGAGGACGAGCTGGGCCAACAGTaGCCCCCGCGCTTGGAAGAT +
Preference number: 5 (lower is better)
Translates to: LLADPLHFLSPGRRVVEDELGQQ*PPRLED
Trigger: ATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCTC...GTCCTCCACAACCCTCCTTCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CAA 90 bp CTTCTTGCGGACCCCTTGCACTTCCTCTCGCCGGGAAGGAGGGTTGTGGAGGACCTTCTTGCGGACCCCTaGCACTTCCTCTCGCCGGGA +
Preference number: 5 (lower is better)
Translates to: LLADPLHFLSPGRRVVEDLLADP*HFLSPG
Trigger: TCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAGAAG...GTCCTCCACAACCCTCCTTCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS GCA 90 bp CCAGCCCTCCCTGTGCGCTGCCAAGCCTGCGTCTTCGATACCCGCTaGACTGCTAACACCTCAAGACCACTGTCTTTGGGGCCCCTTGGA +
Preference number: 5 (lower is better)
Translates to: PALPVRCQACVFDTR*TANTSRPLSLGPLG
Trigger: TCCAAGGGGCCCCAAAGACAGTGGTCTTGAGGTGTTAGCAGTGCAGCGGGTATCGAAGACGCAGGCTTGGCAGCGCACAGGGAGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433302.7
CDS CCA 90 bp CTGTATAGCCAACCGATGAGGACCGCGTTGTCCAGGTTTCGGAGCTaGGCCAACAGTTGCCCCCGCGCTTGGAAGATGGGCAGACTCCGG +
Preference number: 5 (lower is better)
Translates to: LYSQPMRTALSRFRS*ANSCPRAWKMGRLR
Trigger: CCGGAGTCTGCCCATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCTCCGAAACCTGGACAACGCGGTCCTCATCGGTTGGCTATACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572490.1
ENST00000574023.1
CDS-3UTR CAA 90 bp CAGGGAGGCGTACAGAGGAAGGACCAGCATCGCAGGGCAGCCGTCTGGGAGGTGATGTCTCGGCACGTCTaGCTCATGGCTTCGATCTCC +
Preference number: 5 (lower is better)
Translates to: QGGVQRKDQHRRAAVWEVMSRHV*LMASIS
Trigger: GGAGATCGAAGCCATGAGCAAGACGTGCCGAGACAT...CACCTCCCAGACGGCTGCCCTGCGATGCTGGTCCTTCCTCTGTACGCCTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CAA 90 bp ATAGGTGCCATCTGGCTGAAGCTCGGCGGTGCTCATGAAGAGGCTGTGAGCCAGGCCCTTTGGGGCCCCTaGGAAGACTCGGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: IGAIWLKLGGAHEEAVSQALWGP*EDSELL
Trigger: CAGCAGCTCCGAGTCTTCCAAGGGGCCCCAAAGGGC...CTGGCTCACAGCCTCTTCATGAGCACCGCCGAGCTTCAGCCAGATGGCACCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CAA 90 bp GAGTGGTCCACCCTGAGACACAAGCGTTCAGTAGGGATCGCCATCCCAGGAGGTCGCCGGGAAGGAGGGTaGTGGAGGACGCTGTCCACA +
Preference number: 5 (lower is better)
Translates to: EWSTLRHKRSVGIAIPGGRREGG*WRTLST
Trigger: TGTGGACAGCGTCCTCCACAACCCTCCTTCCCGGCG...ACCTCCTGGGATGGCGATCCCTACTGAACGCTTGTGTCTCAGGGTGGACCACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS GCA 90 bp CAAGACCACTGTCTTTGGGGCCCCTTGGAAGACTCGGAGCTGCTGTaGATAGGGCAGGGAGGCGTACAGAGGAAGGACCAGCATCGCAGG +
Preference number: 5 (lower is better)
Translates to: QDHCLWGPLEDSELL*IGQGGVQRKDQHRR
Trigger: CCTGCGATGCTGGTCCTTCCTCTGTACGCCTCCCTGCCCTATGCACAGCAGCTCCGAGTCTTCCAAGGGGCCCCAAAGACAGTGGTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433302.7
CDS-3UTR CAA 90 bp CTGGAAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCCAGGGACCAGTGATTGCCCTTTGGGGCCCCTaGGAAGACTCGGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LEACCKDNCSPSSQGPVIALWGP*EDSELL
Trigger: CAGCAGCTCCGAGTCTTCCAAGGGGCCCCAAAGGGC...AATCACTGGTCCCTGGGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000572490.1
ENST00000574023.1
CDS-3UTR CAA 90 bp CATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAACGACGCAGGCCGGCTaGCAGTGGAAGAGGACAGAC +
Preference number: 5 (lower is better)
Translates to: HPSSATSCGPSRKSPSVTTTQAG*QWKRTD
Trigger: GTCTGTCCTCTTCCACTGCAAGCCGGCCTGCGTCGT...TGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp CAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACGACGCAGGCCGGCTaGCAGTGGAAGAGGACAGAC +
Preference number: 5 (lower is better)
Translates to: QHPSSATSCGPSRKSPSVTTQAG*QWKRTD
Trigger: GTCTGTCCTCTTCCACTGCAAGCCGGCCTGCGTCGT...GACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp CAGCTTCCTCCTAAAGTACTCAGGGGCAGCCTCGTACAGCCACTGTGCATCTATCAGCAGCATCACCACTaGCCTCCCGGGAGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: QLPPKVLRGSLVQPLCIYQQHHH*PPGREG
Trigger: TCCTTCCCTCCCGGGAGGCAAGTGGTGATGCTGCTG...ATAGATGCACAGTGGCTGTACGAGGCTGCCCCTGAGTACTTTAGGAGGAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CAA 90 bp AGCAGTAACATTCAGCCTAACGGCTCCCAACTCACTGTACGTGTGTCGTGCGTGGAGCTGGGCCAACAGTaGCCCCCGCGCTTGGAAGAT +
Preference number: 5 (lower is better)
Translates to: SSNIQPNGSQLTVRVSCVELGQQ*PPRLED
Trigger: ATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCTC...CACGCACGACACACGTACAGTGAGTTGGGAGCCGTTAGGCTGAATGTTACTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp AGCAGTAACATTCAGCCTAACGGCTCCCAACTCACTGTACGTGTGTCGTGCGTGCCGATGAGGACCGCGTaGTCCAGGTTTCGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SSNIQPNGSQLTVRVSCVPMRTA*SRFRSW
Trigger: CCAGCTCCGAAACCTGGACAACGCGGTCCTCATCGG...CACGCACGACACACGTACAGTGAGTTGGGAGCCGTTAGGCTGAATGTTACTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp CAAGAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAACCGATGAGGACCGCGTaGTCCAGGTTTCGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: QELRATSKLRNLLWPFQKPMRTA*SRFRSW
Trigger: CCAGCTCCGAAACCTGGACAACGCGGTCCTCATCGG...TTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp GGTTCTCAGCTTCCTCCTAAAGTACTCAGGGGCAGCCTCGTACAGCCACTGTGCCTTTGCGATAGCCCTTaGGGGCCCCTTGGAAGACTC +
Preference number: 5 (lower is better)
Translates to: GSQLPPKVLRGSLVQPLCLCDSP*GPLGRL
Trigger: GAGTCTTCCAAGGGGCCCCAAAGGGCTATCGCAAAG...GCACAGTGGCTGTACGAGGCTGCCCCTGAGTACTTTAGGAGGAAGCTGAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CAA 90 bp GAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCCTTCTTGCGGACCCCTaGCACTTCCTCTCGCCGGGA +
Preference number: 5 (lower is better)
Translates to: ELRATSKLRNLLWPFQKILLADP*HFLSPG
Trigger: TCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAGAAG...GATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp GCTGTTTGGTGTAAAACACCTGGATCGGATGCTGCCGACCCTCTAGGTAGAGGAACGACGCAGGCCGGCTaGCAGTGGAAGAGGACAGAC +
Preference number: 5 (lower is better)
Translates to: AVWCKTPGSDAADPLGRGTTQAG*QWKRTD
Trigger: GTCTGTCCTCTTCCACTGCAAGCCGGCCTGCGTCGT...TCCTCTACCTAGAGGGTCGGCAGCATCCGATCCAGGTGTTTTACACCAAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CAA 90 bp CTCCCAACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTTGTCTTTGGGGCCCCTaGGAAGACTCGGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LPTHCTCVVRAPGIVLGTCLWGP*EDSELL
Trigger: CAGCAGCTCCGAGTCTTCCAAGGGGCCCCAAAGACA...AGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGTTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433302.7
CDS-3UTR CAA 90 bp ATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCACTGTACGTGTGTCGCAGCAGCATCACCACTaGCCTCCCGGGAGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: MASSNIQPNGSQLTVRVSQQHHH*PPGREG
Trigger: TCCTTCCCTCCCGGGAGGCAAGTGGTGATGCTGCTG...CGACACACGTACAGTGAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000433302.7
CDS-3UTR CAA 90 bp ACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTTTCCATGAGCTGGGCCAACAGTaGCCCCCGCGCTTGGAAGAT +
Preference number: 5 (lower is better)
Translates to: THCTCVVRAPGIVLGTFHELGQQ*PPRLED
Trigger: ATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCTC...ATGGAAAGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp GTTCTCAGCTTCCTCCTAAAGTACTCAGGGGCAGCCTCGTACAGCCACTGTGCACGTCTGGGAGGTGCTTaGCAATGTCTCGGCACGTCT +
Preference number: 5 (lower is better)
Translates to: VLSFLLKYSGAASYSHCARLGGA*QCLGTS
Trigger: AGACGTGCCGAGACATTGCAAAGCACCTCCCAGACG...TGCACAGTGGCTGTACGAGGCTGCCCCTGAGTACTTTAGGAGGAAGCTGAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS CCA 90 bp TCTGAGACTCTAGTAGCAAGAGAGATGGCAGCTACTCGACGAGGCTaGGTCACAGCAATGATGCCCTGGCGGCTGATCCCTCCTTCATAC +
Preference number: 5 (lower is better)
Translates to: SETLVAREMAATRRG*VTAMMPWRLIPPSY
Trigger: GTATGAAGGAGGGATCAGCCGCCAGGGCATCATTGCTGTGACCCAGCCTCGTCGAGTAGCTGCCATCTCTCTTGCTACTAGAGTCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CAA 90 bp CAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCATGTCTCGGCACGTCTaGCTCATGGCTTCGATCTCC +
Preference number: 5 (lower is better)
Translates to: QHPSSATSCGPSRKSPSVMSRHV*LMASIS
Trigger: GGAGATCGAAGCCATGAGCAAGACGTGCCGAGACAT...GACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp AGCAGTAACATTCAGCCTAACGGCTCCCAACTCACTGTACGTGTGTCGTGCGTGCGTCTGGGAGGTGCTTaGCAATGTCTCGGCACGTCT +
Preference number: 5 (lower is better)
Translates to: SSNIQPNGSQLTVRVSCVRLGGA*QCLGTS
Trigger: AGACGTGCCGAGACATTGCAAAGCACCTCCCAGACG...CACGCACGACACACGTACAGTGAGTTGGGAGCCGTTAGGCTGAATGTTACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp CAAGAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAACGTCTGGGAGGTGCTTaGCAATGTCTCGGCACGTCT +
Preference number: 5 (lower is better)
Translates to: QELRATSKLRNLLWPFQKRLGGA*QCLGTS
Trigger: AGACGTGCCGAGACATTGCAAAGCACCTCCCAGACG...TTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp GAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCCTTTGCGATAGCCCTTaGGGGCCCCTTGGAAGACTC +
Preference number: 5 (lower is better)
Translates to: ELRATSKLRNLLWPFQKILCDSP*GPLGRL
Trigger: GAGTCTTCCAAGGGGCCCCAAAGGGCTATCGCAAAG...GATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR CAA 90 bp CAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCTCAAGACCACTGTCTTaGGGGCCCCTTGGAAGACTC +
Preference number: 5 (lower is better)
Translates to: QHPSSATSCGPSRKSPSVSRPLS*GPLGRL
Trigger: GAGTCTTCCAAGGGGCCCCAAAGACAGTGGTCTTGA...GACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433302.7
CDS-3UTR CAA 90 bp TGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCCAGTTGCCCCCGCGCTaGGAAGATGGGCAGACTCCG +
Preference number: 5 (lower is better)
Translates to: CTSHHMASSNIQPNGSQLQLPPR*EDGQTP
Trigger: CGGAGTCTGCCCATCTTCCAAGCGCGGGGGCAACTG...GAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp GAGGTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGCAGTTGCCCCCGCGCTaGGAAGATGGGCAGACTCCG +
Preference number: 5 (lower is better)
Translates to: EVRDNSTSLWKLLQKSVLQLPPR*EDGQTP
Trigger: CGGAGTCTGCCCATCTTCCAAGCGCGGGGGCAACTG...CAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp GAGCACATCTGTGTGGATAGTCCGTTCGTGAGCTTCATCCAAAATGACACAGCTCCGATGAGGACCGCGTaGTCCAGGTTTCGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: EHICVDSPFVSFIQNDTAPMRTA*SRFRSW
Trigger: CCAGCTCCGAAACCTGGACAACGCGGTCCTCATCGG...AGCTGTGTCATTTTGGATGAAGCTCACGAACGGACTATCCACACAGATGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CAA 90 bp CTTTGGGGCCCCTTGGAAGACTCGGAGCTGCTGTGCATAGGGCAGGGAGGCGTAGAGGTTTCAGCGATGTaGGTTGAAATGATCACTTTG +
Preference number: 5 (lower is better)
Translates to: LWGPLEDSELLCIGQGGVEVSAM*VEMITL
Trigger: CAAAGTGATCATTTCAACCAACATCGCTGAAACCTC...TACGCCTCCCTGCCCTATGCACAGCAGCTCCGAGTCTTCCAAGGGGCCCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CAA 90 bp CTTCTTGCGGACCCCTTGCACTTCCTCTCGCCGGGAAGGAGGGTTGTGGAGGACCATTTGGGACTTTCATaGCTAGAAGCTGAAGCATCA +
Preference number: 5 (lower is better)
Translates to: LLADPLHFLSPGRRVVEDHLGLS*LEAEAS
Trigger: TGATGCTTCAGCTTCTAGCAATGAAAGTCCCAAATG...GTCCTCCACAACCCTCCTTCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CAA 90 bp GCTGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACCTTCTTGCGGACCCCTaGCACTTCCTCTCGCCGGGA +
Preference number: 5 (lower is better)
Translates to: AVLHIIWQAVTFSLTAPNLLADP*HFLSPG
Trigger: TCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAGAAG...GTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp TCCAGAAAGAGAGCATCCATGATCTCTGAAGAGCCTCTTGGGCAGCTTGGCCCCAGCCTCTTGGGCAGCTaGGCCCCTGGTTATAACTAT +
Preference number: 5 (lower is better)
Translates to: SRKRASMISEEPLGQLGPSLLGS*APGYNY
Trigger: ATAGTTATAACCAGGGGCCAAGCTGCCCAAGAGGCT...GGGGCCAAGCTGCCCAAGAGGCTCTTCAGAGATCATGGATGCTCTCTTTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CAA 90 bp CAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACTGAGGGATCTGAGTaGTCTTCCCAGAGCCAGTTT +
Preference number: 5 (lower is better)
Translates to: QHPSSATSCGPSRKSPSVTEGSE*SSQSQF
Trigger: AAACTGGCTCTGGGAAGACAACTCAGATCCCTCAGT...GACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CAA 90 bp TGTTGGTGTAGAGCAGCTCAGTGTACACGACGCAGGCCGGCTTGCAGTGGAAGAGCAAAGAGTCTGAAATaGCTTCACGCAGAAGCATGC +
Preference number: 5 (lower is better)
Translates to: CWCRAAQCTRRRPACSGRAKSLK*LHAEAC
Trigger: GCATGCTTCTGCGTGAAGCAATTTCAGACTCTTTGC...TCTTCCACTGCAAGCCGGCCTGCGTCGTGTACACTGAGCTGCTCTACACCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CAA 90 bp ACACGTGACAGGATTCAGAAGGTACAAATCAACCTTCACCCAGGAAGCTTACATCGCCGGGAAGGAGGGTaGTGGAGGACGCTGTCCACA +
Preference number: 5 (lower is better)
Translates to: TRDRIQKVQINLHPGSLHRREGG*WRTLST
Trigger: TGTGGACAGCGTCCTCCACAACCCTCCTTCCCGGCG...ATGTAAGCTTCCTGGGTGAAGGTTGATTTGTACCTTCTGAATCCTGTCACGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CAA 90 bp AGGTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTCGCCGGGAAGGAGGGTaGTGGAGGACGCTGTCCACA +
Preference number: 5 (lower is better)
Translates to: RYEITAPPSGNFYRSQFCRREGG*WRTLST
Trigger: TGTGGACAGCGTCCTCCACAACCCTCCTTCCCGGCG...ACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp GAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCCTGGATATGAACTTCTaGCGGACCCCTTGCACTTCC +
Preference number: 5 (lower is better)
Translates to: ELRATSKLRNLLWPFQKILDMNF*RTPCTS
Trigger: GGAAGTGCAAGGGGTCCGCAAGAAGTTCATATCCAG...GATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp CTTGCGGACCCCTTGCACTTCCTCTCGCCGGGAAGGAGGGTTGTGGAGGACGCTTTGACAAAATTCTCTTaGCACCAATCCTTATTTCCG +
Preference number: 5 (lower is better)
Translates to: LADPLHFLSPGRRVVEDALTKFS*HQSLFP
Trigger: CGGAAATAAGGATTGGTGCAAAGAGAATTTTGTCAA...AGCGTCCTCCACAACCCTCCTTCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CAA 90 bp CATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACACCATCTGTCAGAAACTaGATCCTGGTGTCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: HPSSATSCGPSRKSPSVTPSVRN*ILVSSE
Trigger: CTCAGAAGACACCAGGATCAAGTTTCTGACAGATGG...TGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR CAA 90 bp CAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCTCTGTACAGTGGAATTaGGGGGACATGAGGATGGTT +
Preference number: 5 (lower is better)
Translates to: QHPSSATSCGPSRKSPSVSVQWN*GDMRMV
Trigger: AACCATCCTCATGTCCCCCAAATTCCACTGTACAGA...GACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp AGGTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTCTTCTTGCGGACCCCTaGCACTTCCTCTCGCCGGGA +
Preference number: 5 (lower is better)
Translates to: RYEITAPPSGNFYRSQFCLLADP*HFLSPG
Trigger: TCCCGGCGAGAGGAAGTGCAAGGGGTCCGCAAGAAG...ACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp CTCCCAACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTCTCGGGATGATGCGATaGGCATTGACATCTTTAAGC +
Preference number: 5 (lower is better)
Translates to: LPTHCTCVVRAPGIVLGTLGMMR*ALTSLS
Trigger: GCTTAAAGATGTCAATGCCAATCGCATCATCCCGAG...AGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGTTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp TCTCTAAGCGCCAACCTGGAAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCTTGGCCAGGCTGGTCTaGAACTTCTCAAGCAATCCA +
Preference number: 5 (lower is better)
Translates to: SLSANLEACCKDNCSPSSLARLV*NFSSNP
Trigger: TGGATTGCTTGAGAAGTTCAAGACCAGCCTGGCCAA...GGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGCGCTTAGAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CAA 90 bp TGTAAGCCCAGATGTGGTGTGGTATCTGGCATAAGCCAATGTTCTCTGGGTTCTCCCACAGGGCAGAACTaGCCTCCATTCAGGCATCTC +
Preference number: 5 (lower is better)
Translates to: CKPRCGVVSGISQCSLGSPTGQN*PPFRHL
Trigger: GAGATGCCTGAATGGAGGCAAGTTCTGCCCTGTGGG...AGAACCCAGAGAACATTGGCTTATGCCAGATACCACACCACATCTGGGCTTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CAA 90 bp GAGACACAAGCGTTCAGTAGGGATCGCCATCCCAGGAGGTACGAGATAACAGCACCATCTGTCAGAAACTaGATCCTGGTGTCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: ETQAFSRDRHPRRYEITAPSVRN*ILVSSE
Trigger: CTCAGAAGACACCAGGATCAAGTTTCTGACAGATGG...TGCTGTTATCTCGTACCTCCTGGGATGGCGATCCCTACTGAACGCTTGTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR CAA 90 bp AGCAGTAACATTCAGCCTAACGGCTCCCAACTCACTGTACGTGTGTCGTGCGTGGCAAAGAGTCTGAAATaGCTTCACGCAGAAGCATGC +
Preference number: 5 (lower is better)
Translates to: SSNIQPNGSQLTVRVSCVAKSLK*LHAEAC
Trigger: GCATGCTTCTGCGTGAAGCAATTTCAGACTCTTTGC...CACGCACGACACACGTACAGTGAGTTGGGAGCCGTTAGGCTGAATGTTACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR CAA 90 bp ACTTGGGATATTGCTGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAGCCCTTTGGGGCCCCTaGGAAGACTCGGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: TWDIAVLHIIWQAVTFSLALWGP*EDSELL
Trigger: CAGCAGCTCCGAGTCTTCCAAGGGGCCCCAAAGGGC...TAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACAGCAATATCCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR CAA 90 bp CTGGAAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCCAGGGACCAGTGATTTCTGTACAGTGGAATTaGGGGGACATGAGGATGGTT +
Preference number: 5 (lower is better)
Translates to: LEACCKDNCSPSSQGPVISVQWN*GDMRMV
Trigger: AACCATCCTCATGTCCCCCAAATTCCACTGTACAGA...AATCACTGGTCCCTGGGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
ENST00000574023.1
CDS-3UTR CAA 90 bp CTGGCGGTTCTCAGCTTCCTCCTAAAGTACTCAGGGGCAGCCTCGTACAGCCACATGATGCGATTGGCATaGACATCTTTAAGCAGATGT +
Preference number: 5 (lower is better)
Translates to: LAVLSFLLKYSGAASYSHMMRLA*TSLSRC
Trigger: ACATCTGCTTAAAGATGTCAATGCCAATCGCATCAT...GTGGCTGTACGAGGCTGCCCCTGAGTACTTTAGGAGGAAGCTGAGAACCGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CAA 90 bp GAGACACAAGCGTTCAGTAGGGATCGCCATCCCAGGAGGTACGAGATAACAGCACTCGGGATGATGCGATaGGCATTGACATCTTTAAGC +
Preference number: 5 (lower is better)
Translates to: ETQAFSRDRHPRRYEITALGMMR*ALTSLS
Trigger: GCTTAAAGATGTCAATGCCAATCGCATCATCCCGAG...TGCTGTTATCTCGTACCTCCTGGGATGGCGATCCCTACTGAACGCTTGTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp GTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTACGACGCAGGCCGGCTaGCAGTGGAAGAGGACAGAC +
Preference number: 5 (lower is better)
Translates to: VRDNSTSLWKLLQKSVLFTTQAG*QWKRTD
Trigger: GTCTGTCCTCTTCCACTGCAAGCCGGCCTGCGTCGT...AAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp ATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACTCACTGTACGTGTGTCGTTTACTGGTCTCTGCTaGGAGACAGACACAGAGTGG +
Preference number: 5 (lower is better)
Translates to: MASSNIQPNGSQLTVRVSFTGLC*ETDTEW
Trigger: CCACTCTGTGTCTGTCTCCAAGCAGAGACCAGTAAA...CGACACACGTACAGTGAGTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp ACACGTGACAGGATTCAGAAGGTACAAATCAACCTTCACCCAGGAAGCTTACATTCTCTGAAGAGCCTCTaGGGCAGCTTGGCCCCTGGT +
Preference number: 5 (lower is better)
Translates to: TRDRIQKVQINLHPGSLHSLKSL*GSLAPG
Trigger: ACCAGGGGCCAAGCTGCCCAAGAGGCTCTTCAGAGA...ATGTAAGCTTCCTGGGTGAAGGTTGATTTGTACCTTCTGAATCCTGTCACGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS TCA 90 bp ACGCAGAAGCATGCCATCTGTCAGAAACTTGATCCTGGTGTCTTCTaGGGTGACATCATCAAAGCGCACTGTATAGCCAACCAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: TQKHAICQKLDPGVF*GDIIKAHCIANQLP
Trigger: GGGAAGCTGGTTGGCTATACAGTGCGCTTTGATGATGTCACCTCAGAAGACACCAGGATCAAGTTTCTGACAGATGGCATGCTTCTGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CAA 90 bp TACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTGAGCTGGGCCAACAGTaGCCCCCGCGCTTGGAAGAT +
Preference number: 5 (lower is better)
Translates to: YEITAPPSGNFYRSQFCFELGQQ*PPRLED
Trigger: ATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCTC...AAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp AGGTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTCTTTGCGATAGCCCTTaGGGGCCCCTTGGAAGACTC +
Preference number: 5 (lower is better)
Translates to: RYEITAPPSGNFYRSQFCLCDSP*GPLGRL
Trigger: GAGTCTTCCAAGGGGCCCCAAAGGGCTATCGCAAAG...ACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR CAA 90 bp TCCAGAAAGAGAGCATCCATGATCTCTGAAGAGCCTCTTGGGCAGCTTGGCCCCGAGGTTTCAGCGATGTaGGTTGAAATGATCACTTTG +
Preference number: 5 (lower is better)
Translates to: SRKRASMISEEPLGQLGPEVSAM*VEMITL
Trigger: CAAAGTGATCATTTCAACCAACATCGCTGAAACCTC...GGGGCCAAGCTGCCCAAGAGGCTCTTCAGAGATCATGGATGCTCTCTTTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CAA 90 bp AAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCATTTGGGACTTTCATaGCTAGAAGCTGAAGCATCA +
Preference number: 5 (lower is better)
Translates to: KGNIQAPQPPVALPENLPHLGLS*LEAEAS
Trigger: TGATGCTTCAGCTTCTAGCAATGAAAGTCCCAAATG...AGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp GGATCTCTGGCACGGTCATCTTATCAAACTTCTCAAACTCGTCCTCCGTGTAGACTGGATATGAACTTCTaGCGGACCCCTTGCACTTCC +
Preference number: 5 (lower is better)
Translates to: GSLARSSYQTSQTRPPCRLDMNF*RTPCTS
Trigger: GGAAGTGCAAGGGGTCCGCAAGAAGTTCATATCCAG...TCTACACGGAGGACGAGTTTGAGAAGTTTGATAAGATGACCGTGCCAGAGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS TCA 90 bp GGCGCCATTGAAATACTGAGAGAACAGGTCCACATCCATCGTAGCTaGCATCACAATCACCTGCATAAGAGAACGAAGAGGAGGACCAGA +
Preference number: 5 (lower is better)
Translates to: GAIEILREQVHIHRS*HHNHLHKRTKRRTR
Trigger: TCTGGTCCTCCTCTTCGTTCTCTTATGCAGGTGATTGTGATGTCAGCTACGATGGATGTGGACCTGTTCTCTCAGTATTTCAATGGCGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575153.5
CDS-3UTR CAA 90 bp ATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGCAGTTGCCCCCGCGCTaGGAAGATGGGCAGACTCCG +
Preference number: 5 (lower is better)
Translates to: IKSKSPSKNQKHNFEVSRQLPPR*EDGQTP
Trigger: CGGAGTCTGCCCATCTTCCAAGCGCGGGGGCAACTG...CCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp CTGGAAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCCAGGGACCAGTGATTCATTTGGGACTTTCATaGCTAGAAGCTGAAGCATCA +
Preference number: 5 (lower is better)
Translates to: LEACCKDNCSPSSQGPVIHLGLS*LEAEAS
Trigger: TGATGCTTCAGCTTCTAGCAATGAAAGTCCCAAATG...AATCACTGGTCCCTGGGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
ENST00000574023.1
CDS-3UTR CAA 90 bp CTCCCAACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTGACATGAGGATGGTTTaGGCAAATTTGGGTTCTAAA +
Preference number: 5 (lower is better)
Translates to: LPTHCTCVVRAPGIVLGTDMRMV*ANLGSK
Trigger: TTTAGAACCCAAATTTGCCAAAACCATCCTCATGTC...AGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGTTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp ACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACGACATGAGGATGGTTTaGGCAAATTTGGGTTCTAAA +
Preference number: 5 (lower is better)
Translates to: TSKLRNLLWPFQKISLSHDMRMV*ANLGSK
Trigger: TTTAGAACCCAAATTTGCCAAAACCATCCTCATGTC...GTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp CATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAACCAGCGTCATATTCTaGCTGTTGACAAAATTCTCT +
Preference number: 5 (lower is better)
Translates to: HPSSATSCGPSRKSPSVTTSVIF*LLTKFS
Trigger: AGAGAATTTTGTCAACAGCAAGAATATGACGCTGGT...TGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp TCCAGAAAGAGAGCATCCATGATCTCTGAAGAGCCTCTTGGGCAGCTTGGCCCCATGATGCGATTGGCATaGACATCTTTAAGCAGATGT +
Preference number: 5 (lower is better)
Translates to: SRKRASMISEEPLGQLGPMMRLA*TSLSRC
Trigger: ACATCTGCTTAAAGATGTCAATGCCAATCGCATCAT...GGGGCCAAGCTGCCCAAGAGGCTCTTCAGAGATCATGGATGCTCTCTTTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CAA 90 bp GTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTACACTAGCTGAGAGCTaGACTGCACAGGACCACGGC +
Preference number: 5 (lower is better)
Translates to: VRDNSTSLWKLLQKSVLFTLAES*TAQDHG
Trigger: GCCGTGGTCCTGTGCAGTCAAGCTCTCAGCTAGTGT...AAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CAA 90 bp TCTCTAAGCGCCAACCTGGAAGCCTGCTGTAAGGACAACTGTAGTCCAAGCTCCCTGTCAGATCTTCTTTaGCCCACGTATAACCATTTC +
Preference number: 5 (lower is better)
Translates to: SLSANLEACCKDNCSPSSLSDLL*PTYNHF
Trigger: GAAATGGTTATACGTGGGCAAAAGAAGATCTGACAG...GGAGCTTGGACTACAGTTGTCCTTACAGCAGGCTTCCAGGTTGGCGCTTAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CAA 90 bp ATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGCAGCAGCATCACCACTaGCCTCCCGGGAGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: IKSKSPSKNQKHNFEVSRQQHHH*PPGREG
Trigger: TCCTTCCCTCCCGGGAGGCAAGTGGTGATGCTGCTG...CCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000433302.7
CDS-3UTR CAA 90 bp ATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTCTATTTCCGATGAGGACCGCGTaGTCCAGGTTTCGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: ITAPPSGNFYRSQFCFLFPMRTA*SRFRSW
Trigger: CCAGCTCCGAAACCTGGACAACGCGGTCCTCATCGG...AAATAGAAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp GCTGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACGCAAAGAGTCTGAAATaGCTTCACGCAGAAGCATGC +
Preference number: 5 (lower is better)
Translates to: AVLHIIWQAVTFSLTAPNAKSLK*LHAEAC
Trigger: GCATGCTTCTGCGTGAAGCAATTTCAGACTCTTTGC...GTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR CAA 90 bp ACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTTTCCATCATTTGGGACTTTCATaGCTAGAAGCTGAAGCATCA +
Preference number: 5 (lower is better)
Translates to: THCTCVVRAPGIVLGTFHHLGLS*LEAEAS
Trigger: TGATGCTTCAGCTTCTAGCAATGAAAGTCCCAAATG...ATGGAAAGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp CCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAAGAATGGTTTTGGCAAATTaGGGTTCTAAAGGAAATGCT +
Preference number: 5 (lower is better)
Translates to: PSSATSCGPSRKSPSVTRMVLAN*GSKGNA
Trigger: AGCATTTCCTTTAGAACCCAAATTTGCCAAAACCAT...TCTTGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp CATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACATTGACAAAATTCTCTTaGCACCAATCCTTATTTCCG +
Preference number: 5 (lower is better)
Translates to: HPSSATSCGPSRKSPSVTLTKFS*HQSLFP
Trigger: CGGAAATAAGGATTGGTGCAAAGAGAATTTTGTCAA...TGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp CCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCACAAGATTGACAAAATTCTCTTaGCACCAATCCTTATTTCCG +
Preference number: 5 (lower is better)
Translates to: PSSATSCGPSRKSPSVTRLTKFS*HQSLFP
Trigger: CGGAAATAAGGATTGGTGCAAAGAGAATTTTGTCAA...TCTTGTGACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp CAAGAACTAAGGGCAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAACCAGCGTCATATTCTaGCTGTTGACAAAATTCTCT +
Preference number: 5 (lower is better)
Translates to: QELRATSKLRNLLWPFQKTSVIF*LLTKFS
Trigger: AGAGAATTTTGTCAACAGCAAGAATATGACGCTGGT...TTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTGCCCTTAGTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp AGCAGTAACATTCAGCCTAACGGCTCCCAACTCACTGTACGTGTGTCGTGCGTGATGATGCGATTGGCATaGACATCTTTAAGCAGATGT +
Preference number: 5 (lower is better)
Translates to: SSNIQPNGSQLTVRVSCVMMRLA*TSLSRC
Trigger: ACATCTGCTTAAAGATGTCAATGCCAATCGCATCAT...CACGCACGACACACGTACAGTGAGTTGGGAGCCGTTAGGCTGAATGTTACTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp CTCCCAACTCACTGTACGTGTGTCGTGCGTGCTCCAGGCATAGTTCTGGGTACTCAAGAACTTGGGATATaGCTGTACTTCACATCATAT +
Preference number: 5 (lower is better)
Translates to: LPTHCTCVVRAPGIVLGTQELGI*LYFTSY
Trigger: ATATGATGTGAAGTACAGCAATATCCCAAGTTCTTG...AGTACCCAGAACTATGCCTGGAGCACGCACGACACACGTACAGTGAGTTGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp CAACATCCAAGCTCCGCAACCTCCTGTGGCCCTTCCAGAAAATCTCCCTCAGTCCAAGAACTTGGGATATaGCTGTACTTCACATCATAT +
Preference number: 5 (lower is better)
Translates to: QHPSSATSCGPSRKSPSVQELGI*LYFTSY
Trigger: ATATGATGTGAAGTACAGCAATATCCCAAGTTCTTG...GACTGAGGGAGATTTTCTGGAAGGGCCACAGGAGGTTGCGGAGCTTGGATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp AGGTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTAGCAGCAAAGCCAGATaGTCCCAAGTCCCTACGAAG +
Preference number: 5 (lower is better)
Translates to: RYEITAPPSGNFYRSQFCSSKAR*SQVPTK
Trigger: CTTCGTAGGGACTTGGGACAATCTGGCTTTGCTGCT...ACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CAA 90 bp TCACAATCACTTTCAGAGGAAGTTTCCCGAGTTCCTTTCTCCTCTTCTGTGCAGCCATCTGTCAGAAACTaGATCCTGGTGTCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: SQSLSEEVSRVPFSSSVQPSVRN*ILVSSE
Trigger: CTCAGAAGACACCAGGATCAAGTTTCTGACAGATGG...CTGCACAGAAGAGGAGAAAGGAACTCGGGAAACTTCCTCTGAAAGTGATTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CAA 90 bp TACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTATGTCTCGGCACGTCTaGCTCATGGCTTCGATCTCC +
Preference number: 5 (lower is better)
Translates to: YEITAPPSGNFYRSQFCFMSRHV*LMASIS
Trigger: GGAGATCGAAGCCATGAGCAAGACGTGCCGAGACAT...AAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp GTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTCTGGATATGAACTTCTaGCGGACCCCTTGCACTTCC +
Preference number: 5 (lower is better)
Translates to: VRDNSTSLWKLLQKSVLFLDMNF*RTPCTS
Trigger: GGAAGTGCAAGGGGTCCGCAAGAAGTTCATATCCAG...AAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp AGCAGTAACATTCAGCCTAACGGCTCCCAACTCACTGTACGTGTGTCGTGCGTGTTGACAAAATTCTCTTaGCACCAATCCTTATTTCCG +
Preference number: 5 (lower is better)
Translates to: SSNIQPNGSQLTVRVSCVLTKFS*HQSLFP
Trigger: CGGAAATAAGGATTGGTGCAAAGAGAATTTTGTCAA...CACGCACGACACACGTACAGTGAGTTGGGAGCCGTTAGGCTGAATGTTACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp AGGCATAGTTCTGGGTACTTTCCATTCCTTTTCTCTAAACTTTATGAACCCAATCGTCTGGGAGGTGCTTaGCAATGTCTCGGCACGTCT +
Preference number: 5 (lower is better)
Translates to: RHSSGYFPFLFSKLYEPNRLGGA*QCLGTS
Trigger: AGACGTGCCGAGACATTGCAAAGCACCTCCCAGACG...ATTGGGTTCATAAAGTTTAGAGAAAAGGAATGGAAAGTACCCAGAACTATGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp GCTGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAACGGCTCCCAACGAGGTTTCAGCGATGTaGGTTGAAATGATCACTTTG +
Preference number: 5 (lower is better)
Translates to: AVLHIIWQAVTFSLTAPNEVSAM*VEMITL
Trigger: CAAAGTGATCATTTCAACCAACATCGCTGAAACCTC...GTTGGGAGCCGTTAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000572490.1
CDS-3UTR CAA 90 bp AGTGTTACTCTGGGTGTTGCACACTCCATGATTACTAGAAGACAAACACCTGAGTCTGTACAGTGGAATTaGGGGGACATGAGGATGGTT +
Preference number: 5 (lower is better)
Translates to: SVTLGVAHSMITRRQTPESVQWN*GDMRMV
Trigger: AACCATCCTCATGTCCCCCAAATTCCACTGTACAGA...CTCAGGTGTTTGTCTTCTAGTAATCATGGAGTGTGCAACACCCAGAGTAACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CAA 90 bp CTGTGCTCTGACTTCTGCTACCAGCGTCATATTCTTGCTGTTGACAAAATTCTCCTCGGGATGATGCGATaGGCATTGACATCTTTAAGC +
Preference number: 5 (lower is better)
Translates to: LCSDFCYQRHILAVDKILLGMMR*ALTSLS
Trigger: GCTTAAAGATGTCAATGCCAATCGCATCATCCCGAG...GAGAATTTTGTCAACAGCAAGAATATGACGCTGGTAGCAGAAGTCAGAGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CAA 90 bp TGTAAGCCCAGATGTGGTGTGGTATCTGGCATAAGCCAATGTTCTCTGGGTTCTACCCCACAGATGTATTaGGACCAAGTAAGCACAATA +
Preference number: 5 (lower is better)
Translates to: CKPRCGVVSGISQCSLGSTPQMY*DQVSTI
Trigger: TATTGTGCTTACTTGGTCCAAATACATCTGTGGGGT...AGAACCCAGAGAACATTGGCTTATGCCAGATACCACACCACATCTGGGCTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CAA 90 bp TACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTAAGACTGAGCCGGACTaGACATACACAACTCCGGAC +
Preference number: 5 (lower is better)
Translates to: YEITAPPSGNFYRSQFCFKTEPD*TYTTPD
Trigger: GTCCGGAGTTGTGTATGTCAAGTCCGGCTCAGTCTT...AAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CAA 90 bp ATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTCTATTTATGTCTCGGCACGTCTaGCTCATGGCTTCGATCTCC +
Preference number: 5 (lower is better)
Translates to: ITAPPSGNFYRSQFCFLFMSRHV*LMASIS
Trigger: GGAGATCGAAGCCATGAGCAAGACGTGCCGAGACAT...AAATAGAAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp GATCTCTGGCACGGTCATCTTATCAAACTTCTCAAACTCGTCCTCCGTGTAGAGGACATGAGGATGGTTTaGGCAAATTTGGGTTCTAAA +
Preference number: 5 (lower is better)
Translates to: DLWHGHLIKLLKLVLRVEDMRMV*ANLGSK
Trigger: TTTAGAACCCAAATTTGCCAAAACCATCCTCATGTC...CTCTACACGGAGGACGAGTTTGAGAAGTTTGATAAGATGACCGTGCCAGAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CAA 90 bp AGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTTTGAGGTTTCCAGGTACACTGGATATGAACTTCTaGCGGACCCCTTGCACTTCC +
Preference number: 5 (lower is better)
Translates to: SQSHPVRTKSIILRFPGTLDMNF*RTPCTS
Trigger: GGAAGTGCAAGGGGTCCGCAAGAAGTTCATATCCAG...TGTACCTGGAAACCTCAAAATTATGCTTTTGGTTCTTACTGGGTGACTTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp GAGCACATCTGTGTGGATAGTCCGTTCGTGAGCTTCATCCAAAATGACACAGCTACCAGCGTCATATTCTaGCTGTTGACAAAATTCTCT +
Preference number: 5 (lower is better)
Translates to: EHICVDSPFVSFIQNDTATSVIF*LLTKFS
Trigger: AGAGAATTTTGTCAACAGCAAGAATATGACGCTGGT...AGCTGTGTCATTTTGGATGAAGCTCACGAACGGACTATCCACACAGATGTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CAA 90 bp ACTTGGGATATTGCTGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTATTTACTGGTCTCTGCTaGGAGACAGACACAGAGTGG +
Preference number: 5 (lower is better)
Translates to: TWDIAVLHIIWQAVTFSLFTGLC*ETDTEW
Trigger: CCACTCTGTGTCTGTCTCCAAGCAGAGACCAGTAAA...TAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACAGCAATATCCCAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp GATCTCTGGCACGGTCATCTTATCAAACTTCTCAAACTCGTCCTCCGTGTAGAGATGGTTTTGGCAAATTaGGGTTCTAAAGGAAATGCT +
Preference number: 5 (lower is better)
Translates to: DLWHGHLIKLLKLVLRVEMVLAN*GSKGNA
Trigger: AGCATTTCCTTTAGAACCCAAATTTGCCAAAACCAT...CTCTACACGGAGGACGAGTTTGAGAAGTTTGATAAGATGACCGTGCCAGAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574023.1
CDS-3UTR CAA 90 bp ACTTGGGATATTGCTGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTATCTGTACAGTGGAATTaGGGGGACATGAGGATGGTT +
Preference number: 5 (lower is better)
Translates to: TWDIAVLHIIWQAVTFSLSVQWN*GDMRMV
Trigger: AACCATCCTCATGTCCCCCAAATTCCACTGTACAGA...TAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACAGCAATATCCCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp AGGCATAGTTCTGGGTACTTTCCATTCCTTTTCTCTAAACTTTATGAACCCAATAAGTTCAAGCAATTCTaGTGCCTCAGCCTCCCCGGT +
Preference number: 5 (lower is better)
Translates to: RHSSGYFPFLFSKLYEPNKFKQF*CLSLPG
Trigger: ACCGGGGAGGCTGAGGCACAAGAATTGCTTGAACTT...ATTGGGTTCATAAAGTTTAGAGAAAAGGAATGGAAAGTACCCAGAACTATGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CAA 90 bp CTAAGAGGAACCGTTAGTGCCTTTTCTCTGCTCAGAATATCAGAACAGGAACAGAGGCATGCAATCTGCTaGGAGTGCATCTATTTACAT +
Preference number: 5 (lower is better)
Translates to: LRGTVSAFSLLRISEQEQRHAIC*ECIYLH
Trigger: ATGTAAATAGATGCACTCCAAGCAGATTGCATGCCT...CTGTTCCTGTTCTGATATTCTGAGCAGAGAAAAGGCACTAACGGTTCCTCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CAA 90 bp GAGGTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGATGGTTTTGGCAAATTaGGGTTCTAAAGGAAATGCT +
Preference number: 5 (lower is better)
Translates to: EVRDNSTSLWKLLQKSVLMVLAN*GSKGNA
Trigger: AGCATTTCCTTTAGAACCCAAATTTGCCAAAACCAT...CAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp AGGCATAGTTCTGGGTACTTTCCATTCCTTTTCTCTAAACTTTATGAACCCAATTTTACTGGTCTCTGCTaGGAGACAGACACAGAGTGG +
Preference number: 5 (lower is better)
Translates to: RHSSGYFPFLFSKLYEPNFTGLC*ETDTEW
Trigger: CCACTCTGTGTCTGTCTCCAAGCAGAGACCAGTAAA...ATTGGGTTCATAAAGTTTAGAGAAAAGGAATGGAAAGTACCCAGAACTATGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp GTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTGACATGAGGATGGTTTaGGCAAATTTGGGTTCTAAA +
Preference number: 5 (lower is better)
Translates to: VRDNSTSLWKLLQKSVLFDMRMV*ANLGSK
Trigger: TTTAGAACCCAAATTTGCCAAAACCATCCTCATGTC...AAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp GTACGAGATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTACCAGCGTCATATTCTaGCTGTTGACAAAATTCTCT +
Preference number: 5 (lower is better)
Translates to: VRDNSTSLWKLLQKSVLFTSVIF*LLTKFS
Trigger: AGAGAATTTTGTCAACAGCAAGAATATGACGCTGGT...AAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTATCTCGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp GGCTCAGGTGTTAAATTAAGTCAAAGTCACCCAGTAAGAACCAAAAGCATAATTCTCGGGATGATGCGATaGGCATTGACATCTTTAAGC +
Preference number: 5 (lower is better)
Translates to: GSGVKLSQSHPVRTKSIILGMMR*ALTSLS
Trigger: GCTTAAAGATGTCAATGCCAATCGCATCATCCCGAG...AATTATGCTTTTGGTTCTTACTGGGTGACTTTGACTTAATTTAACACCTGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp AGTGTTACTCTGGGTGTTGCACACTCCATGATTACTAGAAGACAAACACCTGAGCAAGAACTTGGGATATaGCTGTACTTCACATCATAT +
Preference number: 5 (lower is better)
Translates to: SVTLGVAHSMITRRQTPEQELGI*LYFTSY
Trigger: ATATGATGTGAAGTACAGCAATATCCCAAGTTCTTG...CTCAGGTGTTTGTCTTCTAGTAATCATGGAGTGTGCAACACCCAGAGTAACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS-3UTR CAA 90 bp ACTTGGGATATTGCTGTACTTCACATCATATGGCAAGCAGTAACATTCAGCCTAATGATGCGATTGGCATaGACATCTTTAAGCAGATGT +
Preference number: 5 (lower is better)
Translates to: TWDIAVLHIIWQAVTFSLMMRLA*TSLSRC
Trigger: ACATCTGCTTAAAGATGTCAATGCCAATCGCATCAT...TAGGCTGAATGTTACTGCTTGCCATATGATGTGAAGTACAGCAATATCCCAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS-3UTR CAA 90 bp ATAACAGCACCTCCCTCTGGAAACTTCTACAGAAGTCAGTTTTGTTTTCTATTTATGGTTTTGGCAAATTaGGGTTCTAAAGGAAATGCT +
Preference number: 5 (lower is better)
Translates to: ITAPPSGNFYRSQFCFLFMVLAN*GSKGNA
Trigger: AGCATTTCCTTTAGAACCCAAATTTGCCAAAACCAT...AAATAGAAAACAAAACTGACTTCTGTAGAAGTTTCCAGAGGGAGGTGCTGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
CDS CAA 72 bp GCGCGGCTCGGAGGTCCAGAGCCTGGCCGGAATCTCTaGGCCGGCGGGAAGCCCGCCTCCTCCGGCATGTCG +
Preference number: 6 (lower is better)
Translates to: ARLGGPEPGRNL*AGGKPASSGMS
Trigger: CGACATGCCGGAGGAGGCGGGCTTCCCGCCGGCCAAGAGATTCCGGCCAGGCTCTGGACCTCCGAGCCGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000433302.7
CDS CAA 90 bp AAGGACCCAGCGCGGCTCGGAGGTCCAGAGCCTGGCCGGAATCTCTaGGCCGGCGGGAAGCCCGCCTCCTCCGGCATGTCGGGAGGGCAC +
Preference number: 6 (lower is better)
Translates to: KDPARLGGPEPGRNL*AGGKPASSGMSGGH
Trigger: GTGCCCTCCCGACATGCCGGAGGAGGCGGGCTTCCCGCCGGCCAAGAGATTCCGGCCAGGCTCTGGACCTCCGAGCCGCGCTGGGTCCTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000433302.7
CDS CCA 72 bp AGGGAAGGACCCAGCGCGGCTCGGAGGTCCAGAGCCTaGCCGGAATCTCTTGGCCGGCGGGAAGCCCGCCTC +
Preference number: 6 (lower is better)
Translates to: REGPSAARRSRA*PESLGRREARL
Trigger: GAGGCGGGCTTCCCGCCGGCCAAGAGATTCCGGCCAGGCTCTGGACCTCCGAGCCGCGCTGGGTCCTTCCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225296.8
ENST00000433302.7
CDS GCA 72 bp AGGCGCAAGCGCCGAGAGCTCCTGCCCCCTCTCAGGTaGAGACAACAGGAGCACACCGCCCCTTCCTCGCCG +
Preference number: 6 (lower is better)
Translates to: RRKRRELLPPLR*RQQEHTAPSSP
Trigger: CGGCGAGGAAGGGGCGGTGTGCTCCTGTTGTCTGCACCTGAGAGGGGGCAGGAGCTCTCGGCGCTTGCGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS CAA 90 bp CCCGATGAGGACCGCGTTGTCCAGGTTTCGGAGCTGGGCCAACAGTaGCCCCCGCGCTTGGAAGATGGGCAGACTCCGGCGCTGCAGCTC +
Preference number: 6 (lower is better)
Translates to: PDEDRVVQVSELGQQ*PPRLEDGQTPALQL
Trigger: GAGCTGCAGCGCCGGAGTCTGCCCATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCTCCGAAACCTGGACAACGCGGTCCTCATCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS GCA 72 bp ACCGCGTTGTCCAGGTTTCGGAGCTGGGCCAACAGTTaGCCCCGCGCTTGGAAGATGGGCAGACTCCGGCGC +
Preference number: 6 (lower is better)
Translates to: TALSRFRSWANS*PRAWKMGRLRR
Trigger: GCGCCGGAGTCTGCCCATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCTCCGAAACCTGGACAACGCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
ENST00000574023.1
CDS CCA 72 bp GGAGCTGGGCCAACAGTTGCCCCCGCGCTTGGAAGATaGGCAGACTCCGGCGCTGCAGCTCCACAGCTTCAG +
Preference number: 6 (lower is better)
Translates to: GAGPTVAPALGR*ADSGAAAPQLQ
Trigger: CTGAAGCTGTGGAGCTGCAGCGCCGGAGTCTGCCCATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
ENST00000574023.1
CDS CAA 72 bp CAGGTTTCGGAGCTGGGCCAACAGTTGCCCCCGCGCTaGGAAGATGGGCAGACTCCGGCGCTGCAGCTCCAC +
Preference number: 6 (lower is better)
Translates to: QVSELGQQLPPR*EDGQTPALQLH
Trigger: GTGGAGCTGCAGCGCCGGAGTCTGCCCATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCTCCGAAACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
ENST00000574023.1
CDS CAA 72 bp GACCGCGTTGTCCAGGTTTCGGAGCTGGGCCAACAGTaGCCCCCGCGCTTGGAAGATGGGCAGACTCCGGCG +
Preference number: 6 (lower is better)
Translates to: DRVVQVSELGQQ*PPRLEDGQTPA
Trigger: CGCCGGAGTCTGCCCATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCTCCGAAACCTGGACAACGCGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
ENST00000574023.1
CDS CAA 90 bp CGCGTTGTCCAGGTTTCGGAGCTGGGCCAACAGTTGCCCCCGCGCTaGGAAGATGGGCAGACTCCGGCGCTGCAGCTCCACAGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: RVVQVSELGQQLPPR*EDGQTPALQLHSFR
Trigger: CCTGAAGCTGTGGAGCTGCAGCGCCGGAGTCTGCCCATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCTCCGAAACCTGGACAACGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
ENST00000574023.1
CDS CAA 90 bp TCCGATGAGGACCGCGTTGTCCAGGTTTCGGAGCTGGGCCAACAGTaGCCCCCGCGCTTGGAAGATGGGCAGACTCCGGCGCTGCAGCTC +
Preference number: 6 (lower is better)
Translates to: SDEDRVVQVSELGQQ*PPRLEDGQTPALQL
Trigger: GAGCTGCAGCGCCGGAGTCTGCCCATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCTCCGAAACCTGGACAACGCGGTCCTCATCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433302.7
CDS CAA 90 bp ACCGATGAGGACCGCGTTGTCCAGGTTTCGGAGCTGGGCCAACAGTaGCCCCCGCGCTTGGAAGATGGGCAGACTCCGGCGCTGCAGCTC +
Preference number: 6 (lower is better)
Translates to: TDEDRVVQVSELGQQ*PPRLEDGQTPALQL
Trigger: GAGCTGCAGCGCCGGAGTCTGCCCATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCTCCGAAACCTGGACAACGCGGTCCTCATCGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572490.1
ENST00000574023.1
CDS CCA 72 bp AGGTTTCGGAGCTGGGCCAACAGTTGCCCCCGCGCTTaGAAGATGGGCAGACTCCGGCGCTGCAGCTCCACA +
Preference number: 6 (lower is better)
Translates to: RFRSWANSCPRA*KMGRLRRCSST
Trigger: TGTGGAGCTGCAGCGCCGGAGTCTGCCCATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCTCCGAAACCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225296.8
ENST00000433302.7
ENST00000572490.1
ENST00000574023.1
CDS CCA 72 bp TCCCCGATGAGGACCGCGTTGTCCAGGTTTCGGAGCTaGGCCAACAGTTGCCCCCGCGCTTGGAAGATGGGC +
Preference number: 6 (lower is better)
Translates to: SPMRTALSRFRS*ANSCPRAWKMG
Trigger: GCCCATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCTCCGAAACCTGGACAACGCGGTCCTCATCGGGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS CCA 72 bp CTTCCGATGAGGACCGCGTTGTCCAGGTTTCGGAGCTaGGCCAACAGTTGCCCCCGCGCTTGGAAGATGGGC +
Preference number: 6 (lower is better)
Translates to: LPMRTALSRFRS*ANSCPRAWKMG
Trigger: GCCCATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCTCCGAAACCTGGACAACGCGGTCCTCATCGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433302.7
CDS CCA 72 bp CAACCGATGAGGACCGCGTTGTCCAGGTTTCGGAGCTaGGCCAACAGTTGCCCCCGCGCTTGGAAGATGGGC +
Preference number: 6 (lower is better)
Translates to: QPMRTALSRFRS*ANSCPRAWKMG
Trigger: GCCCATCTTCCAAGCGCGGGGGCAACTGTTGGCCCAGCTCCGAAACCTGGACAACGCGGTCCTCATCGGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572490.1
ENST00000574023.1
CDS GCA 72 bp TGTCTTTGGGGCCCCTTGGAAGACTCGGAGCTGCTGTaGATAGGGCAGGGAGGCGTACAGAGGAAGGACCAG +
Preference number: 6 (lower is better)
Translates to: CLWGPLEDSELL*IGQGGVQRKDQ
Trigger: CTGGTCCTTCCTCTGTACGCCTCCCTGCCCTATGCACAGCAGCTCCGAGTCTTCCAAGGGGCCCCAAAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433302.7
CDS CAA 72 bp TGTCCTGTGAAGAAGGGGCTTCCGATGAGGACCGCGTaGTCCAGGTTTCGGAGCTGGGCCAACAGTTGCCCC +
Preference number: 6 (lower is better)
Translates to: CPVKKGLPMRTA*SRFRSWANSCP
Trigger: GGGGCAACTGTTGGCCCAGCTCCGAAACCTGGACAACGCGGTCCTCATCGGAAGCCCCTTCTTCACAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433302.7
CDS GCA 72 bp CCTGTGCGCTGCCAAGCCTGCGTCTTCGATACCCGCTaGACTGCTAACACCTCAAGACCACTGTCTTTGGGG +
Preference number: 6 (lower is better)
Translates to: PVRCQACVFDTR*TANTSRPLSLG
Trigger: CCCCAAAGACAGTGGTCTTGAGGTGTTAGCAGTGCAGCGGGTATCGAAGACGCAGGCTTGGCAGCGCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433302.7
CDS CAA 72 bp CAAAGCGCACTGTATAGCCAACCGATGAGGACCGCGTaGTCCAGGTTTCGGAGCTGGGCCAACAGTTGCCCC +
Preference number: 6 (lower is better)
Translates to: QSALYSQPMRTA*SRFRSWANSCP
Trigger: GGGGCAACTGTTGGCCCAGCTCCGAAACCTGGACAACGCGGTCCTCATCGGTTGGCTATACAGTGCGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572490.1
ENST00000574023.1
CDS CCA 72 bp CTAGTAGCAAGAGAGATGGCAGCTACTCGACGAGGCTaGGTCACAGCAATGATGCCCTGGCGGCTGATCCCT +
Preference number: 6 (lower is better)
Translates to: LVAREMAATRRG*VTAMMPWRLIP
Trigger: AGGGATCAGCCGCCAGGGCATCATTGCTGTGACCCAGCCTCGTCGAGTAGCTGCCATCTCTCTTGCTACTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225296.8
CDS CAA 90 bp GAGTCTGAAATTGCTTCACGCAGAAGCATGCCATCTGTCAGAAACTaGATCCTGGTGTCTTCTGAGGTGACATCATCAAAGCGCACTGTA +
Preference number: 6 (lower is better)
Translates to: ESEIASRRSMPSVRN*ILVSSEVTSSKRTV
Trigger: TACAGTGCGCTTTGATGATGTCACCTCAGAAGACACCAGGATCAAGTTTCTGACAGATGGCATGCTTCTGCGTGAAGCAATTTCAGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000572490.1
ENST00000574023.1
CDS TCA 72 bp GAAATACTGAGAGAACAGGTCCACATCCATCGTAGCTaGCATCACAATCACCTGCATAAGAGAACGAAGAGG +
Preference number: 6 (lower is better)
Translates to: EILREQVHIHRS*HHNHLHKRTKR
Trigger: CCTCTTCGTTCTCTTATGCAGGTGATTGTGATGTCAGCTACGATGGATGTGGACCTGTTCTCTCAGTATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575153.5
CDS CAA 72 bp ATTGCTTCACGCAGAAGCATGCCATCTGTCAGAAACTaGATCCTGGTGTCTTCTGAGGTGACATCATCAAAG +
Preference number: 6 (lower is better)
Translates to: IASRRSMPSVRN*ILVSSEVTSSK
Trigger: CTTTGATGATGTCACCTCAGAAGACACCAGGATCAAGTTTCTGACAGATGGCATGCTTCTGCGTGAAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225296.8
ENST00000572490.1
ENST00000574023.1