RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DHX32 (Homo sapiens)

Ensembl gene IDs: ENSG00000089876

Ensembl transcript IDs: ENST00000284690.4, ENST00000368721.5, ENST00000415732.1

Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AATAATATACACAGTGTTATTTTCTTCAAGACCGTCCTGTGGATGTaGAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCA +
Preference number: 1 (lower is better)
Translates to: NNIHSVIFFKTVLWM*NPSSRHVSPISSSS
Trigger: TGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCTTGAAGAAAATAACACTGTGTATATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
3UTR-3UTR GCA 90 bp TGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCTTTGGGACCCTGCTaGACCTTGTGTTTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: CGCEIRLRVMYLPYPAVQPLGPC*TLCLLG
Trigger: CCCCAGCAAACACAAGGTGCAGCAGGGTCCCAAAGG...CTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
3UTR-3UTR GCA 90 bp TTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACCTTTGGGACCCTGCTaGACCTTGTGTTTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: FRLSSSTKSRVLSHVSLTPLGPC*TLCLLG
Trigger: CCCCAGCAAACACAAGGTGCAGCAGGGTCCCAAAGG...TGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
3UTR-3UTR TCA 90 bp TTATTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACCGTCCTGTGGATGTaGAATCCGTCTTCGCGTCAT +
Preference number: 2 (lower is better)
Translates to: LFRLSSSTKSRVLSHVSLTVLWM*NPSSRH
Trigger: ATGACGCGAAGACGGATTTCACATCCACAGGACGGT...CAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
3UTR-3UTR GCA 90 bp TTATTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGCTACCTTTGGGACCCTaGTGCACCTTGTGTTTGCTG +
Preference number: 2 (lower is better)
Translates to: LFRLSSSTKSRVLSHVSLLPLGP*CTLCLL
Trigger: CAGCAAACACAAGGTGCAGCAGGGTCCCAAAGGTAG...CAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
3UTR TCA 72 bp CACAGTGTTATTTTCTTCAAGACCGTCCTGTGGATGTaGAATCCGTCTTCGCGTCATGTATCTCCCATATCC +
Preference number: 3 (lower is better)
Translates to: HSVIFFKTVLWM*NPSSRHVSPIS
Trigger: GGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCTTGAAGAAAATAACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CCA 90 bp TGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCACCCGCAGGGCGAGCTaGACCACAGTCTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: CEIRLRVMYLPYPAVQPSTRRAS*TTVCLW
Trigger: CCACAAGCAGACTGTGGTCCAGCTCGCCCTGCGGGT...GGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR GCA 90 bp CGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGGCTTGTGGACCTGTGTaGATATCACGCCCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: RPVDVKSVFASCISHIQQACGPV*ISRPRA
Trigger: AGCACGGGGGCGTGATATGCACACAGGTCCACAAGC...CTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR GCA 90 bp CGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCTACCTTCCTTTGGGACCCTGCTaGACCTTGTGTTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RLRVMYLPYPAVQPSSYLPLGPC*TLCLLG
Trigger: CCCCAGCAAACACAAGGTGCAGCAGGGTCCCAAAGG...AAGGTAGCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp GAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCCCTTTGGGACCCTGCTaGACCTTGTGTTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: EIRLRVMYLPYPAVQPSSPLGPC*TLCLLG
Trigger: CCCCAGCAAACACAAGGTGCAGCAGGGTCCCAAAGG...GCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp CGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGGCTGCACCTTGTGTTTaGTGGGGAGTCACTGGAGAG +
Preference number: 4 (lower is better)
Translates to: RPVDVKSVFASCISHIQQAAPCV*WGVTGE
Trigger: CTCTCCAGTGACTCCCCAGCAAACACAAGGTGCAGC...CTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CCA 90 bp CGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCTACCTTGCTGTGCTCGTTTCCTaGTCTGCTAAGTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: RLRVMYLPYPAVQPSSYLAVLVS*SAKWLP
Trigger: TGGGAGCCACTTAGCAGACCAGGAAACGAGCACAGC...AAGGTAGCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368721.5
CDS-3UTR TCA 90 bp TCTTCAAGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCAGTGCTGGTCTGTTCATaGAGTCACAGTGGCCTAGGC +
Preference number: 4 (lower is better)
Translates to: SSRPSCGCEIRLRVMYLPVLVCS*SHSGLG
Trigger: GCCTAGGCCACTGTGACTTCATGAACAGACCAGCAC...TGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCTTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR TCA 90 bp GAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCACCGTCCTGTGGATGTaGAATCCGTCTTCGCGTCAT +
Preference number: 4 (lower is better)
Translates to: EIRLRVMYLPYPAVQPSSTVLWM*NPSSRH
Trigger: ATGACGCGAAGACGGATTTCACATCCACAGGACGGT...GCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp CGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCTACCTTAGCTGGACCACAGTCTaGTTGTGGACCTGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: RLRVMYLPYPAVQPSSYLSWTTV*LWTCVH
Trigger: ATGCACACAGGTCCACAAGCAGACTGTGGTCCAGCT...AAGGTAGCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR GCA 90 bp TGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCCTCTGGCTGATGGGCTaGATGACGAGCGAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: CEIRLRVMYLPYPAVQPSLWLMG*MTSEFA
Trigger: AGCAAACTCGCTCGTCATGCAGCCCATCAGCCAGAG...GGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp TCTTCAAGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCACTCTGGCTGATGGGCTaGATGACGAGCGAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: SSRPSCGCEIRLRVMYLPLWLMG*MTSEFA
Trigger: AGCAAACTCGCTCGTCATGCAGCCCATCAGCCAGAG...TGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCTTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp GAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCGGCTTCCTGCATTTCTaGTGGCTTCAGTGGCGTCAT +
Preference number: 4 (lower is better)
Translates to: EIRLRVMYLPYPAVQPSSGFLHF*WLQWRH
Trigger: ATGACGCCACTGAAGCCAGCAGAAATGCAGGAAGCC...GCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CCA 90 bp TCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTGGGTCCCACATCAGCTaGTACACAGGTACGGTCCCT +
Preference number: 4 (lower is better)
Translates to: SCGCEIRLRVMYLPYPAVGSHIS*YTGTVP
Trigger: AGGGACCGTACCTGTGTACCAGCTGATGTGGGACCC...AACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368721.5
CDS-3UTR TCA 90 bp TGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCACCGTCCTGTGGATGTaGAATCCGTCTTCGCGTCAT +
Preference number: 4 (lower is better)
Translates to: CEIRLRVMYLPYPAVQPSTVLWM*NPSSRH
Trigger: ATGACGCGAAGACGGATTTCACATCCACAGGACGGT...GGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR TCA 90 bp TGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCTCACTGAGAACTAGGTaGGCTGTGCTCGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: CEIRLRVMYLPYPAVQPSSLRTR*AVLVSW
Trigger: CCAGGAAACGAGCACAGCTCACCTAGTTCTCAGTGA...GGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368721.5
CDS-3UTR GCA 90 bp GAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCGCATCTGTTCTCCGTTaGTGTGTTACCCACTGTGCT +
Preference number: 4 (lower is better)
Translates to: EIRLRVMYLPYPAVQPSSASVLR*CVTHCA
Trigger: AGCACAGTGGGTAACACAGCAACGGAGAACAGATGC...GCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR GCA 90 bp CGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGAGCCAAGAATCTGCTTaGGTATCTCTGCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: RPVDVKSVFASCISHIQQSQESA*VSLPGS
Trigger: AGAGCCAGGCAGAGATACGCAAGCAGATTCTTGGCT...CTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp TCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTGCTGCACCTTGTGTTTaGTGGGGAGTCACTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SCGCEIRLRVMYLPYPAVAAPCV*WGVTGE
Trigger: CTCTCCAGTGACTCCCCAGCAAACACAAGGTGCAGC...AACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CCA 90 bp GAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCTTCATGAAGTCACAGTaGCCTAGGCCCGCAATGTCT +
Preference number: 4 (lower is better)
Translates to: EIRLRVMYLPYPAVQPSSFMKSQ*PRPAMS
Trigger: AGACATTGCGGGCCTAGGCCACTGTGACTTCATGAA...GCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CCA 90 bp GAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCTTGCTGGGGAGTCACTaGAGAGTGCATCTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: EIRLRVMYLPYPAVQPSSLLGSH*RVHLCS
Trigger: TGAACAGAGATGCACTCTCCAGTGACTCCCCAGCAA...GCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CCA 90 bp TGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGGCACCTTGTGTTTGCTaGGGAGTCACTGGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: CGCEIRLRVMYLPYPAVQAPCVC*GVTGEC
Trigger: GCACTCTCCAGTGACTCCCCAGCAAACACAAGGTGC...CTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR TCA 90 bp TGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCCTGGCATCTTCTTGGTaGTTGAGTAACCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: CEIRLRVMYLPYPAVQPSLASSW*LSNQTG
Trigger: CCCTGTCTGGTTACTCAATCACCAAGAAGATGCCAG...GGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR TCA 90 bp TGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCGACACAGGGGATAGGTaGTCCACTACTTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: CEIRLRVMYLPYPAVQPSDTGDR*STTCCR
Trigger: TCTACAGCAAGTAGTGGATCACCTATCCCCTGTGTC...GGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR TCA 90 bp AGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGACACAGGGGATAGGTaGTCCACTACTTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: RPSCGCEIRLRVMYLPYPDTGDR*STTCCR
Trigger: TCTACAGCAAGTAGTGGATCACCTATCCCCTGTGTC...TGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp TCTTCAAGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCAAGCCAAGAATCTGCTTaGGTATCTCTGCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SSRPSCGCEIRLRVMYLPSQESA*VSLPGS
Trigger: AGAGCCAGGCAGAGATACGCAAGCAGATTCTTGGCT...TGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCTTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp TGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCGATGAGCCAAGAATCTaGTTGCGTATCTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: CEIRLRVMYLPYPAVQPSDEPRI*LRISAW
Trigger: CCAGGCAGAGATACGCAAGCAGATTCTTGGCTCATC...GGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp TCTTCAAGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCAGATGAGCCAAGAATCTaGTTGCGTATCTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSRPSCGCEIRLRVMYLPDEPRI*LRISAW
Trigger: CCAGGCAGAGATACGCAAGCAGATTCTTGGCTCATC...TGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCTTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp GAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCGGAGTCACTGGAGAGTaGATCTCTGTTCAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: EIRLRVMYLPYPAVQPSSGVTGE*ISVQFQ
Trigger: CTGAAACTGAACAGAGATGCACTCTCCAGTGACTCC...GCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp TGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCTACCTTTGGGACCCTaGTGCACCTTGTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: CGCEIRLRVMYLPYPAVQLPLGP*CTLCLL
Trigger: CAGCAAACACAAGGTGCAGCAGGGTCCCAAAGGTAG...CTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CCA 90 bp TCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTTTCTGCTGGCTTCAGTaGCGTCATGTCTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SCGCEIRLRVMYLPYPAVFCWLQ*RHVFGG
Trigger: GCCTCCAAAGACATGACGCCACTGAAGCCAGCAGAA...AACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CCA 90 bp GTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCTTCCTGCATTTCTGCTaGCTTCAGTGGCGTCATGTC +
Preference number: 4 (lower is better)
Translates to: VDVKSVFASCISHIQQFSFLHFC*LQWRHV
Trigger: GACATGACGCCACTGAAGCCAGCAGAAATGCAGGAA...GCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CCA 90 bp GTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCTTCATGAAGTCACAGTaGCCTAGGCCCGCAATGTCT +
Preference number: 4 (lower is better)
Translates to: VDVKSVFASCISHIQQFSFMKSQ*PRPAMS
Trigger: AGACATTGCGGGCCTAGGCCACTGTGACTTCATGAA...GCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CCA 90 bp AGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCATTGCTGGGGAGTCACTaGAGAGTGCATCTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: RPSCGCEIRLRVMYLPYPLLGSH*RVHLCS
Trigger: TGAACAGAGATGCACTCTCCAGTGACTCCCCAGCAA...TGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR TCA 90 bp TCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTGTGAGCTCACGCAGCTaGCATTCCACAAGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: SCGCEIRLRVMYLPYPAVVSSRS*HSTSKF
Trigger: AAACTTGCTTGTGGAATGTCAGCTGCGTGAGCTCAC...AACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR TCA 90 bp CGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCTACCTTTCCATGTGGCACATGTaGAAAGCAATTTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RLRVMYLPYPAVQPSSYLSMWHM*KAIWSC
Trigger: ACAGCTCCAAATTGCTTTTCACATGTGCCACATGGA...AAGGTAGCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR TCA 90 bp GAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCTGCCATTCTGAGTGCTaGACAGTTGAGGAAGTAATC +
Preference number: 4 (lower is better)
Translates to: EIRLRVMYLPYPAVQPSSCHSEC*TVEEVI
Trigger: GATTACTTCCTCAACTGTTCAGCACTCAGAATGGCA...GCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp TGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCGGAGTCACTGGAGAGTaGATCTCTGTTCAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: CEIRLRVMYLPYPAVQPSGVTGE*ISVQFQ
Trigger: CTGAAACTGAACAGAGATGCACTCTCCAGTGACTCC...GGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp AGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAACAGGTACGGTCCCTTaGTTGCACTTCCTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RPSCGCEIRLRVMYLPYPTGTVP*LHFLFP
Trigger: TGGAAAAAGGAAGTGCAAGCAAGGGACCGTACCTGT...TGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368721.5
CDS-3UTR CCA 90 bp TGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGACCACAGTCTGCTTGTaGACCTGTGTGCATATCACG +
Preference number: 4 (lower is better)
Translates to: CGCEIRLRVMYLPYPAVQTTVCL*TCVHIT
Trigger: CGTGATATGCACACAGGTCCACAAGCAGACTGTGGT...CTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR TCA 90 bp GTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCGCTGATCAGGTGAGGTaGGGAGTTAATTATGAGCTT +
Preference number: 4 (lower is better)
Translates to: VDVKSVFASCISHIQQFSADQVR*GVNYEL
Trigger: AAGCTCATAATTAACTCCTCACCTCACCTGATCAGC...GCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR TCA 90 bp GTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCTCCATGTGGCACATGTaGAAAGCAATTTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VDVKSVFASCISHIQQFSSMWHM*KAIWSC
Trigger: ACAGCTCCAAATTGCTTTTCACATGTGCCACATGGA...GCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR TCA 90 bp GTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCTGCCATTCTGAGTGCTaGACAGTTGAGGAAGTAATC +
Preference number: 4 (lower is better)
Translates to: VDVKSVFASCISHIQQFSCHSEC*TVEEVI
Trigger: GATTACTTCCTCAACTGTTCAGCACTCAGAATGGCA...GCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp TCTTCAAGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCACATGACGAGCGAGTTTaGTCTTATTCTCGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: SSRPSCGCEIRLRVMYLPHDERV*SYSRVV
Trigger: TACAACCCGAGAATAAGAGCAAACTCGCTCGTCATG...TGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCTTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CCA 90 bp TCTTCAAGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCAGTGTTTAAAGTTTGGTaGGTTCCGGTATTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SSRPSCGCEIRLRVMYLPVFKVW*VPVFPG
Trigger: GCCAGGAAATACCGGAACCCACCAAACTTTAAACAC...TGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCTTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR CCA 90 bp TCTTCAAGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCACGTGCTGGTAGTGGATaGAAAGACAATATTCAGCAC +
Preference number: 4 (lower is better)
Translates to: SSRPSCGCEIRLRVMYLPRAGSG*KDNIQH
Trigger: GTGCTGAATATTGTCTTTCCATCCACTACCAGCACG...TGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCTTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR CCA 90 bp CGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCTACCTTTCAGGATTGTTTCGTTaGTACAGCAGTTCTCGAAAG +
Preference number: 4 (lower is better)
Translates to: RLRVMYLPYPAVQPSSYLSGLFR*YSSSRK
Trigger: CTTTCGAGAACTGCTGTACCAACGAAACAATCCTGA...AAGGTAGCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR CCA 90 bp TGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCGTGGCGTCATGTCTTTaGAGGCAAATTCTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: CEIRLRVMYLPYPAVQPSVASCL*RQILQC
Trigger: ACACTGAAGAATTTGCCTCCAAAGACATGACGCCAC...GGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CCA 90 bp CGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCTACCTTCTGCATCAAACTTTCTaGTGCTGGTCTGTTCATGAA +
Preference number: 4 (lower is better)
Translates to: RLRVMYLPYPAVQPSSYLLHQTF*CWSVHE
Trigger: TTCATGAACAGACCAGCACCAGAAAGTTTGATGCAG...AAGGTAGCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CCA 90 bp GAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCTTAGAGTGTTTTCCTTaGAGCCAAAAGCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: EIRLRVMYLPYPAVQPSSLECFP*SQKQVL
Trigger: CAGAACCTGCTTTTGGCTCCAAGGAAAACACTCTAA...GCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR TCA 90 bp TGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGTTTGCTGATCAGGTaGGGTGAGGAGTTAATTATG +
Preference number: 4 (lower is better)
Translates to: CEIRLRVMYLPYPAVQPSSLLIR*GEELIM
Trigger: CATAATTAACTCCTCACCTCACCTGATCAGCAAACT...GGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR TCA 90 bp CGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTCAAAAGAATCCTTTTaGGCCTCACTAAGGTACACA +
Preference number: 4 (lower is better)
Translates to: RPVDVKSVFASCISHIQQSKESF*ASLRYT
Trigger: TGTGTACCTTAGTGAGGCTCAAAAGGATTCTTTTGA...CTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR TCA 90 bp TGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGTTCTCACCCGAGTGGTaGATTTCAAAGATAAGGCGT +
Preference number: 4 (lower is better)
Translates to: CGCEIRLRVMYLPYPAVQFSPEW*ISKIRR
Trigger: ACGCCTTATCTTTGAAATTCACCACTCGGGTGAGAA...CTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR TCA 90 bp TCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCTGATGAGGGTAAAGTaGTCTCCTTCGGGATGTAAA +
Preference number: 4 (lower is better)
Translates to: SCGCEIRLRVMYLPYPAVLMRVK*SPSGCK
Trigger: TTTACATCCCGAAGGAGATCACTTTACCCTCATCAG...AACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR TCA 90 bp CGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTGTCCCATGTGTCTCTaGCACATTTACAAAATACCA +
Preference number: 4 (lower is better)
Translates to: RPVDVKSVFASCISHIQQCPMCL*HIYKIP
Trigger: TGGTATTTTGTAAATGTGTCAGAGACACATGGGACA...CTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp AGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCACTATCAGTAACCCATTaGAAACAGGGCTTAAAAGCC +
Preference number: 4 (lower is better)
Translates to: RPSCGCEIRLRVMYLPYPLSVTH*KQGLKA
Trigger: GGCTTTTAAGCCCTGTTTGCAATGGGTTACTGATAG...TGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR CCA 90 bp AGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCACTGGTGTTTAAAGTTTaGTGGGTTCCGGTATTTCCT +
Preference number: 4 (lower is better)
Translates to: RPSCGCEIRLRVMYLPYPLVFKV*WVPVFP
Trigger: AGGAAATACCGGAACCCACCAAACTTTAAACACCAG...TGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR CCA 90 bp AGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCACAAACTTTCTGGTGCTaGTCTGTTCATGAAGTCACA +
Preference number: 4 (lower is better)
Translates to: RPSCGCEIRLRVMYLPYPQTFWC*SVHEVT
Trigger: TGTGACTTCATGAACAGACCAGCACCAGAAAGTTTG...TGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CCA 90 bp TCTTCAAGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCACTGCATCAAACTTTCTaGTGCTGGTCTGTTCATGAA +
Preference number: 4 (lower is better)
Translates to: SSRPSCGCEIRLRVMYLPLHQTF*CWSVHE
Trigger: TTCATGAACAGACCAGCACCAGAAAGTTTGATGCAG...TGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCTTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CCA 90 bp AGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACATGCACCTTGTGTTTGCTaGGGAGTCACTGGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: RLSSSTKSRVLSHVSLTHAPCVC*GVTGEC
Trigger: GCACTCTCCAGTGACTCCCCAGCAAACACAAGGTGC...ATGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CCA 90 bp TTATTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGTCCTGGTCTGCTAAGTaGCTCCCAGGAAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LFRLSSSTKSRVLSHVSLSWSAK*LPGSWA
Trigger: TGCCCAGCTTCCTGGGAGCCACTTAGCAGACCAGGA...CAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368721.5
CDS-3UTR TCA 90 bp TTATTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGGTGCTGGTCTGTTCATaGAGTCACAGTGGCCTAGGC +
Preference number: 4 (lower is better)
Translates to: LFRLSSSTKSRVLSHVSLVLVCS*SHSGLG
Trigger: GCCTAGGCCACTGTGACTTCATGAACAGACCAGCAC...CAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR TCA 90 bp CGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGGTTGATCCTAATGAGTaGAAACTTGCCAATTGGAAT +
Preference number: 4 (lower is better)
Translates to: RPVDVKSVFASCISHIQQVDPNE*KLANWN
Trigger: ATTCCAATTGGCAAGTTTTCACTCATTAGGATCAAC...CTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368721.5
CDS-3UTR GCA 90 bp AGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACATCTGTGTTACCCACTGTaGTGGCTCACTACAGCACTC +
Preference number: 4 (lower is better)
Translates to: RLSSSTKSRVLSHVSLTHLCYPL*WLTTAL
Trigger: GAGTGCTGTAGTGAGCCAGCACAGTGGGTAACACAG...ATGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR GCA 90 bp TTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACAGGCTTCCTGCATTTCTaGTGGCTTCAGTGGCGTCAT +
Preference number: 4 (lower is better)
Translates to: FRLSSSTKSRVLSHVSLTGFLHF*WLQWRH
Trigger: ATGACGCCACTGAAGCCAGCAGAAATGCAGGAAGCC...TGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp TCTTCAAGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATTGTGGTACCAGCTaGATAAATAGTTCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: SSRPSCGCEIRLRVMYLPYCGTS*INSSGE
Trigger: CTCTCCTGAACTATTTATGCAGCTGGTACCACAATA...TGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCTTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp TTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACTACCTTTGGGACCCTaGTGCACCTTGTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: FRLSSSTKSRVLSHVSLTLPLGP*CTLCLL
Trigger: CAGCAAACACAAGGTGCAGCAGGGTCCCAAAGGTAG...TGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp AGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAATGACTTCCCACAACTaGCATAGTTTTTACAGCTCA +
Preference number: 4 (lower is better)
Translates to: RPSCGCEIRLRVMYLPYPMTSHN*HSFYSS
Trigger: TGAGCTGTAAAAACTATGGCAGTTGTGGGAAGTCAT...TGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368721.5
CDS-3UTR CCA 90 bp TGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGGGTTCCGGTATTTCCTaGCTGGTTCAGAAAATGATT +
Preference number: 4 (lower is better)
Translates to: CGCEIRLRVMYLPYPAVQGSGIS*LVQKMI
Trigger: AATCATTTTCTGAACCAGCCAGGAAATACCGGAACC...CTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR TCA 90 bp AGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCACTTCGGCATTGTAAATaGTTGTCAATAAACCACACT +
Preference number: 4 (lower is better)
Translates to: RPSCGCEIRLRVMYLPYPLRHCK*LSINHT
Trigger: AGTGTGGTTTATTGACAATCATTTACAATGCCGAAG...TGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR TCA 90 bp TCTTCAAGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATTTCATCGAGTGGCTTaGACAATGAACATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SSRPSCGCEIRLRVMYLPFHRVA*TMNISL
Trigger: AAGAGAAATGTTCATTGTTCAAGCCACTCGATGAAA...TGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCTTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR TCA 90 bp GTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCGATAACAAATCTGACTaGGTTGCTCCAGATCAAAAA +
Preference number: 4 (lower is better)
Translates to: VDVKSVFASCISHIQQFSDNKSD*VAPDQK
Trigger: TTTTTGATCTGGAGCAACTCAGTCAGATTTGTTATC...GCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR TCA 90 bp GTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCATCAAGAGGAAACTCTaGCATGATGATTCCAAATTC +
Preference number: 4 (lower is better)
Translates to: VDVKSVFASCISHIQQFSIKRKL*HDDSKF
Trigger: GAATTTGGAATCATCATGTCAGAGTTTCCTCTTGAT...GCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR TCA 90 bp AGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACATCTGGCATCTTCTTGGTaGTTGAGTAACCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: RLSSSTKSRVLSHVSLTHLASSW*LSNQTG
Trigger: CCCTGTCTGGTTACTCAATCACCAAGAAGATGCCAG...ATGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp AGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACATGCCAAAAGCAGGTTCTaGATAGGGAAGCTCGATTCG +
Preference number: 4 (lower is better)
Translates to: RLSSSTKSRVLSHVSLTHAKSRF*IGKLDS
Trigger: CGAATCGAGCTTCCCTATGCAGAACCTGCTTTTGGC...ATGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp CGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCTACCTTAAATCCCTGTGTTGCTaGCTACATGTATCTTTAAAT +
Preference number: 4 (lower is better)
Translates to: RLRVMYLPYPAVQPSSYLKSLCC*LHVSLN
Trigger: ATTTAAAGATACATGTAGGCAGCAACACAGGGATTT...AAGGTAGCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368721.5
CDS-3UTR GCA 90 bp TGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAAGAAATCCCTGTGTTaGTGCCTACATGTATCTTTA +
Preference number: 4 (lower is better)
Translates to: CEIRLRVMYLPYPAVQPSKKSLC*CLHVSL
Trigger: TAAAGATACATGTAGGCAGCAACACAGGGATTTCTT...GGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368721.5
CDS-3UTR CCA 90 bp GTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCAGGAATAATTTAGGCTaGTGTTTAAAGTTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: VDVKSVFASCISHIQQFSRNNLG*CLKFGG
Trigger: CCCACCAAACTTTAAACACCAGCCTAAATTATTCCT...GCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR CCA 90 bp TTATTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGTTCTGCTGGCTTCAGTaGCGTCATGTCTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LFRLSSSTKSRVLSHVSLFCWLQ*RHVFGG
Trigger: GCCTCCAAAGACATGACGCCACTGAAGCCAGCAGAA...CAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CCA 90 bp TTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACATTCCTGCATTTCTGCTaGCTTCAGTGGCGTCATGTC +
Preference number: 4 (lower is better)
Translates to: FRLSSSTKSRVLSHVSLTFLHFC*LQWRHV
Trigger: GACATGACGCCACTGAAGCCAGCAGAAATGCAGGAA...TGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR TCA 90 bp TCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTGAGTGGCTTGAACAATaGACATTTCTCTTTTGGATA +
Preference number: 4 (lower is better)
Translates to: SCGCEIRLRVMYLPYPAVEWLEQ*TFLFWI
Trigger: TATCCAAAAGAGAAATGTTCATTGTTCAAGCCACTC...AACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp TTATTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGGCCAAAAGCAGGTTCTaGATAGGGAAGCTCGATTCG +
Preference number: 4 (lower is better)
Translates to: LFRLSSSTKSRVLSHVSLAKSRF*IGKLDS
Trigger: CGAATCGAGCTTCCCTATGCAGAACCTGCTTTTGGC...CAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp TTATTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGGAACTAGGTGAGCTGTaGTCGTTTCCTGGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: LFRLSSSTKSRVLSHVSLELGEL*SFPGLL
Trigger: TAGCAGACCAGGAAACGAGCACAGCTCACCTAGTTC...CAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368721.5
CDS-3UTR CCA 90 bp TTATTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGTGTTACCCACTGTGCTaGCTCACTACAGCACTCTTC +
Preference number: 4 (lower is better)
Translates to: LFRLSSSTKSRVLSHVSLCYPLC*LTTALF
Trigger: GAAGAGTGCTGTAGTGAGCCAGCACAGTGGGTAACA...CAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR GCA 90 bp AGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACATCATGACGAGCGAGTTTaGTCTTATTCTCGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: RLSSSTKSRVLSHVSLTHHDERV*SYSRVV
Trigger: TACAACCCGAGAATAAGAGCAAACTCGCTCGTCATG...ATGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp AGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACATGTACGGTCCCTTGCTTaGACTTCCTTTTTCCACATA +
Preference number: 4 (lower is better)
Translates to: RLSSSTKSRVLSHVSLTHVRSLA*TSFFHI
Trigger: TATGTGGAAAAAGGAAGTGCAAGCAAGGGACCGTAC...ATGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368721.5
CDS-3UTR CCA 90 bp TTATTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGTTCAGAGGAAGAGTTTaGACACTCCAGCCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LFRLSSSTKSRVLSHVSLFRGRV*TLQPFF
Trigger: GAAGAAGGGCTGGAGTGTCCAAACTCTTCCTCTGAA...CAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR TCA 90 bp TTATTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGCTGATGAGGGTAAAGTaGTCTCCTTCGGGATGTAAA +
Preference number: 4 (lower is better)
Translates to: LFRLSSSTKSRVLSHVSLLMRVK*SPSGCK
Trigger: TTTACATCCCGAAGGAGATCACTTTACCCTCATCAG...CAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CCA 90 bp TTATTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGGTGGCGTCATGTCTTTaGAGGCAAATTCTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: LFRLSSSTKSRVLSHVSLVASCL*RQILQC
Trigger: ACACTGAAGAATTTGCCTCCAAAGACATGACGCCAC...CAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CCA 90 bp TTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACAAACTTTCTGGTGCTaGTCTGTTCATGAAGTCACA +
Preference number: 4 (lower is better)
Translates to: FRLSSSTKSRVLSHVSLTQTFWC*SVHEVT
Trigger: TGTGACTTCATGAACAGACCAGCACCAGAAAGTTTG...TGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CCA 90 bp TTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACATTAGAGTGTTTTCCTTaGAGCCAAAAGCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: FRLSSSTKSRVLSHVSLTLECFP*SQKQVL
Trigger: CAGAACCTGCTTTTGGCTCCAAGGAAAACACTCTAA...TGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CCA 90 bp AGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACATACCAAGCAAACAGCATaGCTGTTGATCCTAATGAGT +
Preference number: 4 (lower is better)
Translates to: RLSSSTKSRVLSHVSLTHTKQTA*LLILMS
Trigger: ACTCATTAGGATCAACAGCCATGCTGTTTGCTTGGT...ATGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368721.5
CDS-3UTR TCA 90 bp AGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACATTGTCCCATGTGTCTCTaGCACATTTACAAAATACCA +
Preference number: 4 (lower is better)
Translates to: RLSSSTKSRVLSHVSLTHCPMCL*HIYKIP
Trigger: TGGTATTTTGTAAATGTGTCAGAGACACATGGGACA...ATGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR TCA 90 bp TTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACAAAAGATGCACCTAAATaGGAAAACGTCTTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: FRLSSSTKSRVLSHVSLTKDAPK*ENVFGE
Trigger: TTCCCCAAAGACGTTTTCTCATTTAGGTGCATCTTT...TGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368721.5
CDS-3UTR TCA 90 bp TTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACAGAGTGGCTTGAACAATaGACATTTCTCTTTTGGATA +
Preference number: 4 (lower is better)
Translates to: FRLSSSTKSRVLSHVSLTEWLEQ*TFLFWI
Trigger: TATCCAAAAGAGAAATGTTCATTGTTCAAGCCACTC...TGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR TCA 90 bp AGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACATGATAACAAATCTGACTaGGTTGCTCCAGATCAAAAA +
Preference number: 4 (lower is better)
Translates to: RLSSSTKSRVLSHVSLTHDNKSD*VAPDQK
Trigger: TTTTTGATCTGGAGCAACTCAGTCAGATTTGTTATC...ATGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR TCA 90 bp TTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACAATCAAGAGGAAACTCTaGCATGATGATTCCAAATTC +
Preference number: 4 (lower is better)
Translates to: FRLSSSTKSRVLSHVSLTIKRKL*HDDSKF
Trigger: GAATTTGGAATCATCATGTCAGAGTTTCCTCTTGAT...TGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR GCA 90 bp TTATTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGTATTGTGGTACCAGCTaGATAAATAGTTCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LFRLSSSTKSRVLSHVSLYCGTS*INSSGE
Trigger: CTCTCCTGAACTATTTATGCAGCTGGTACCACAATA...CAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS CCA 90 bp CCCAGGAAGCTGGGCAGAGGCCGCTCCAGGGGGTCCCACATCAGCTaGTACACAGGTACGGTCCCTTGCTTGCACTTCCTTTTTCCACAT +
Preference number: 5 (lower is better)
Translates to: PRKLGRGRSRGSHIS*YTGTVPCLHFLFPH
Trigger: ATGTGGAAAAAGGAAGTGCAAGCAAGGGACCGTACCTGTGTACCAGCTGATGTGGGACCCCCTGGAGCGGCCTCTGCCCAGCTTCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368721.5
CDS GCA 90 bp CCACCCGCAGGGCGAGCTGGACCACAGTCTGCTTGTGGACCTGTGTaGATATCACGCCCCCGTGCTGGTAGTGGATGGAAAGACAATATT +
Preference number: 5 (lower is better)
Translates to: PPAGRAGPQSACGPV*ISRPRAGSGWKDNI
Trigger: AATATTGTCTTTCCATCCACTACCAGCACGGGGGCGTGATATGCACACAGGTCCACAAGCAGACTGTGGTCCAGCTCGCCCTGCGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS GCA 90 bp CCCATATCCAGCAGTTCAGCCATCCAGCTACCTTTGGGACCCTGCTaGACCTTGTGTTTGCTGGGGAGTCACTGGAGAGTGCATCTCTGT +
Preference number: 5 (lower is better)
Translates to: PISSSSAIQLPLGPC*TLCLLGSHWRVHLC
Trigger: ACAGAGATGCACTCTCCAGTGACTCCCCAGCAAACACAAGGTGCAGCAGGGTCCCAAAGGTAGCTGGATGGCTGAACTGCTGGATATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp GAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCGGACCCTGCTGCACCTaGTGTTTGCTGGGGAGTCAC +
Preference number: 5 (lower is better)
Translates to: EIRLRVMYLPYPAVQPSSGPCCT*CLLGSH
Trigger: GTGACTCCCCAGCAAACACAAGGTGCAGCAGGGTCC...GCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS CCA 90 bp GCTTGTGGACCTGTGTGCATATCACGCCCCCGTGCTGGTAGTGGATaGAAAGACAATATTCAGCACACCACTGAGGAACCTGAGCGCTCT +
Preference number: 5 (lower is better)
Translates to: ACGPVCISRPRAGSG*KDNIQHTTEEPERS
Trigger: AGAGCGCTCAGGTTCCTCAGTGGTGTGCTGAATATTGTCTTTCCATCCACTACCAGCACGGGGGCGTGATATGCACACAGGTCCACAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS CCA 90 bp GAAGAAGATGAGCCAAGAATCTGCTTGCGTATCTCTGCCTGGCTCTaGCTGATGGGCTGCATGACGAGCGAGTTTGCTCTTATTCTCGGG +
Preference number: 5 (lower is better)
Translates to: EEDEPRICLRISAWL*LMGCMTSEFALILG
Trigger: CCCGAGAATAAGAGCAAACTCGCTCGTCATGCAGCCCATCAGCCAGAGCCAGGCAGAGATACGCAAGCAGATTCTTGGCTCATCTTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS CCA 90 bp CTACCTTTGGGACCCTGCTGCACCTTGTGTTTGCTGGGGAGTCACTaGAGAGTGCATCTCTGTTCAGTTTCAGGGCACGTCTCACACATT +
Preference number: 5 (lower is better)
Translates to: LPLGPCCTLCLLGSH*RVHLCSVSGHVSHI
Trigger: AATGTGTGAGACGTGCCCTGAAACTGAACAGAGATGCACTCTCCAGTGACTCCCCAGCAAACACAAGGTGCAGCAGGGTCCCAAAGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp CGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCTACCTTGAGCCAAGAATCTGCTaGCGTATCTCTGCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: RLRVMYLPYPAVQPSSYLEPRIC*RISAWL
Trigger: GAGCCAGGCAGAGATACGCAAGCAGATTCTTGGCTC...AAGGTAGCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp TGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGGGACCCTGCTGCACCTaGTGTTTGCTGGGGAGTCAC +
Preference number: 5 (lower is better)
Translates to: CGCEIRLRVMYLPYPAVQGPCCT*CLLGSH
Trigger: GTGACTCCCCAGCAAACACAAGGTGCAGCAGGGTCC...CTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS GCA 90 bp CCAAGAATCTGCTTGCGTATCTCTGCCTGGCTCTGGCTGATGGGCTaGATGACGAGCGAGTTTGCTCTTATTCTCGGGTTGTACACCTTT +
Preference number: 5 (lower is better)
Translates to: PRICLRISAWLWLMG*MTSEFALILGLYTF
Trigger: AAAGGTGTACAACCCGAGAATAAGAGCAAACTCGCTCGTCATGCAGCCCATCAGCCAGAGCCAGGCAGAGATACGCAAGCAGATTCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp CGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTGCATCTGTTCTCCGTaGCTGTGTTACCCACTGTGC +
Preference number: 5 (lower is better)
Translates to: RPVDVKSVFASCISHIQQCICSP*LCYPLC
Trigger: GCACAGTGGGTAACACAGCAACGGAGAACAGATGCA...CTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR CAA 90 bp AGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCATGCTGCACCTTGTGTTaGCTGGGGAGTCACTGGAGA +
Preference number: 5 (lower is better)
Translates to: RPSCGCEIRLRVMYLPYPCCTLC*LGSHWR
Trigger: TCTCCAGTGACTCCCCAGCAAACACAAGGTGCAGCA...TGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp TGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCTGCTGCACCTTGTGTTaGCTGGGGAGTCACTGGAGA +
Preference number: 5 (lower is better)
Translates to: CEIRLRVMYLPYPAVQPSCCTLC*LGSHWR
Trigger: TCTCCAGTGACTCCCCAGCAAACACAAGGTGCAGCA...GGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp TCTTCAAGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATGGACCACAGTCTGCTaGTGGACCTGTGTGCATATC +
Preference number: 5 (lower is better)
Translates to: SSRPSCGCEIRLRVMYLPWTTVC*WTCVHI
Trigger: GATATGCACACAGGTCCACAAGCAGACTGTGGTCCA...TGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCTTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS TCA 90 bp CCATCTAGAAAAATAGCAAGGTATCACAGGTCACTGAGAACTAGGTaGGCTGTGCTCGTTTCCTGGTCTGCTAAGTGGCTCCCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: PSRKIARYHRSLRTR*AVLVSWSAKWLPGS
Trigger: GCTTCCTGGGAGCCACTTAGCAGACCAGGAAACGAGCACAGCTCACCTAGTTCTCAGTGACCTGTGATACCTTGCTATTTTTCTAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368721.5
CDS CCA 90 bp TTTCCTGAAGAAGATGAGCCAAGAATCTGCTTGCGTATCTCTGCCTaGCTCTGGCTGATGGGCTGCATGACGAGCGAGTTTGCTCTTATT +
Preference number: 5 (lower is better)
Translates to: FPEEDEPRICLRISA*LWLMGCMTSEFALI
Trigger: AATAAGAGCAAACTCGCTCGTCATGCAGCCCATCAGCCAGAGCCAGGCAGAGATACGCAAGCAGATTCTTGGCTCATCTTCTTCAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp AGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCACCTTCTTCTTCCATCTaGTCTGACAGTGAGCTCACG +
Preference number: 5 (lower is better)
Translates to: RPSCGCEIRLRVMYLPYPPSSSI*SDSELT
Trigger: CGTGAGCTCACTGTCAGACAAGATGGAAGAAGAAGG...TGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR CAA 90 bp GAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCACCATGCTTGTTAGGTaGGCTTCCTGCATTTCTGCT +
Preference number: 5 (lower is better)
Translates to: EIRLRVMYLPYPAVQPSSTMLVR*ASCISA
Trigger: AGCAGAAATGCAGGAAGCCAACCTAACAAGCATGGT...GCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp TGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCACAGGTACGGTCCCTaGCTTGCACTTCCTTTTTCC +
Preference number: 5 (lower is better)
Translates to: CGCEIRLRVMYLPYPAVQHRYGP*LALPFS
Trigger: GGAAAAAGGAAGTGCAAGCAAGGGACCGTACCTGTG...CTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368721.5
CDS TCA 90 bp GCTGAATTTATGGAAGAGGACCCACTCTGGCATCTTCTTGGTGATTaGGTAACCAGACAGGGGATGCAGCTGAGCAACCTGCTTATGTGT +
Preference number: 5 (lower is better)
Translates to: AEFMEEDPLWHLLGD*VTRQGMQLSNLLMC
Trigger: ACACATAAGCAGGTTGCTCAGCTGCATCCCCTGTCTGGTTACTCAATCACCAAGAAGATGCCAGAGTGGGTCCTCTTCCATAAATTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp CGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCTACCTTGCTCTTATTCTCGGGTaGTACACCTTTCTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: RLRVMYLPYPAVQPSSYLALILG*YTFLLS
Trigger: GGAAAGAAGAAAGGTGTACAACCCGAGAATAAGAGC...AAGGTAGCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp TGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGTGGCGTCATGTCTTaGGAGGCAAATTCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: CEIRLRVMYLPYPAVQPSSGVMS*EANSSV
Trigger: CACTGAAGAATTTGCCTCCAAAGACATGACGCCACT...GGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp TCTTCAAGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCACCTATCAGTAACCCATaGCAAACAGGGCTTAAAAGC +
Preference number: 5 (lower is better)
Translates to: SSRPSCGCEIRLRVMYLPPISNP*QTGLKS
Trigger: GCTTTTAAGCCCTGTTTGCAATGGGTTACTGATAGG...TGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCTTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR CAA 90 bp AGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCACTCAGGATTGTTTCGTaGGTACAGCAGTTCTCGAAA +
Preference number: 5 (lower is better)
Translates to: RPSCGCEIRLRVMYLPYPLRIVS*VQQFSK
Trigger: TTTCGAGAACTGCTGTACCAACGAAACAATCCTGAG...TGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR CAA 90 bp CGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCTACCTTGACTTTCTCAATATCTaGTTCACAGGCCAGAAAGAC +
Preference number: 5 (lower is better)
Translates to: RLRVMYLPYPAVQPSSYLDFLNI*FTGQKD
Trigger: GTCTTTCTGGCCTGTGAACAAGATATTGAGAAAGTC...AAGGTAGCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR CAA 90 bp TGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCGCTCTTATTCTCGGGTaGTACACCTTTCTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: CEIRLRVMYLPYPAVQPSALILG*YTFLLS
Trigger: GGAAAGAAGAAAGGTGTACAACCCGAGAATAAGAGC...GGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp TGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGACCATGCTTGTTAGGTaGGCTTCCTGCATTTCTGCT +
Preference number: 5 (lower is better)
Translates to: CGCEIRLRVMYLPYPAVQTMLVR*ASCISA
Trigger: AGCAGAAATGCAGGAAGCCAACCTAACAAGCATGGT...CTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp TGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCGCTGTTCCTTATTCATaGTTGACACAGGGGATAGGT +
Preference number: 5 (lower is better)
Translates to: CEIRLRVMYLPYPAVQPSAVPYS*LTQGIG
Trigger: ACCTATCCCCTGTGTCAACAATGAATAAGGAACAGC...GGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp AGACCGTCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCTGTTCCTTATTCATaGTTGACACAGGGGATAGGT +
Preference number: 5 (lower is better)
Translates to: RPSCGCEIRLRVMYLPYPAVPYS*LTQGIG
Trigger: ACCTATCCCCTGTGTCAACAATGAATAAGGAACAGC...TGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGACGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp CGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCTACCTTGCACGTCTCACACATTaGCTGTTCCTTATTCATTGT +
Preference number: 5 (lower is better)
Translates to: RLRVMYLPYPAVQPSSYLARLTH*LFLIHC
Trigger: ACAATGAATAAGGAACAGCAAATGTGTGAGACGTGC...AAGGTAGCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS GCA 90 bp ATTCCTCAAACCTGCATCTGTTCTCCGTTGCTGTGTTACCCACTGTaGTGGCTCACTACAGCACTCTTCGGCATTGTAAATGATTGTCAA +
Preference number: 5 (lower is better)
Translates to: IPQTCICSPLLCYPL*WLTTALFGIVNDCQ
Trigger: TTGACAATCATTTACAATGCCGAAGAGTGCTGTAGTGAGCCAGCACAGTGGGTAACACAGCAACGGAGAACAGATGCAGGTTTGAGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000415732.1
CDS-3UTR CAA 90 bp GTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCTACAATACCTCAGGATaGTTTCGTTGGTACAGCAGT +
Preference number: 5 (lower is better)
Translates to: VDVKSVFASCISHIQQFSYNTSG*FRWYSS
Trigger: ACTGCTGTACCAACGAAACAATCCTGAGGTATTGTA...GCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR CAA 90 bp CGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCTACCTTGGACATCATTTCTCTTaGCAGCATATCATCAGTACA +
Preference number: 5 (lower is better)
Translates to: RLRVMYLPYPAVQPSSYLGHHFS*QHIIST
Trigger: TGTACTGATGATATGCTGCAAAGAGAAATGATGTCC...AAGGTAGCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR CAA 90 bp AGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACATGAGCCAAGAATCTGCTaGCGTATCTCTGCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: RLSSSTKSRVLSHVSLTHEPRIC*RISAWL
Trigger: GAGCCAGGCAGAGATACGCAAGCAGATTCTTGGCTC...ATGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp TCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTTTACCATGGCTGCGATaGTTAGCACTTCATCTACAC +
Preference number: 5 (lower is better)
Translates to: SCGCEIRLRVMYLPYPAVLPWLR*LALHLH
Trigger: GTGTAGATGAAGTGCTAACAATCGCAGCCATGGTAA...AACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp CGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCTACCTTATTCAGAGTTGTGTCTaGGTAAGCCTTGTAAATGCT +
Preference number: 5 (lower is better)
Translates to: RLRVMYLPYPAVQPSSYLIQSCV*VSLVNA
Trigger: AGCATTTACAAGGCTTACCAAGACACAACTCTGAAT...AAGGTAGCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp GAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCAGCAAAGAAATCCCTGTGTaGCTGCCTACATGTATCTTT +
Preference number: 5 (lower is better)
Translates to: EIRLRVMYLPYPAVQPSSKEIPV*LPTCIF
Trigger: AAAGATACATGTAGGCAGCAACACAGGGATTTCTTT...GCTGGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368721.5
CDS GCA 90 bp TCTATCCTCTTCATAAAAAGCACCATGCTTGTTAGGTTGGCTTCCTaGATTTCTGCTGGCTTCAGTGGCGTCATGTCTTTGGAGGCAAAT +
Preference number: 5 (lower is better)
Translates to: SILFIKSTMLVRLAS*ISAGFSGVMSLEAN
Trigger: ATTTGCCTCCAAAGACATGACGCCACTGAAGCCAGCAGAAATGCAGGAAGCCAACCTAACAAGCATGGTGCTTTTTATGAAGAGGATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp GTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCGTTTCATCGAGTGGCTaGAACAATGAACATTTCTCT +
Preference number: 5 (lower is better)
Translates to: VDVKSVFASCISHIQQFSVSSSG*NNEHFS
Trigger: AGAGAAATGTTCATTGTTCAAGCCACTCGATGAAAC...GCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp TGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGCCATCCACAAATCTGACTGAGTaGCTCCAGATCAAAAACTCT +
Preference number: 5 (lower is better)
Translates to: CEIRLRVMYLPYPAVQPSTNLTE*LQIKNS
Trigger: AGAGTTTTTGATCTGGAGCAACTCAGTCAGATTTGT...GGATGGCTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp TGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGTTTAGAGTGTTTTCCTaGGAGCCAAAAGCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: CGCEIRLRVMYLPYPAVQFRVFS*EPKAGS
Trigger: AGAACCTGCTTTTGGCTCCAAGGAAAACACTCTAAA...CTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp TCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTGTTCCTTATTCATTGTaGACACAGGGGATAGGTGAT +
Preference number: 5 (lower is better)
Translates to: SCGCEIRLRVMYLPYPAVVPYSL*TQGIGD
Trigger: ATCACCTATCCCCTGTGTCAACAATGAATAAGGAAC...AACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp TGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAGACAAATCTGACTGAGTaGCTCCAGATCAAAAACTCT +
Preference number: 5 (lower is better)
Translates to: CGCEIRLRVMYLPYPAVQTNLTE*LQIKNS
Trigger: AGAGTTTTTGATCTGGAGCAACTCAGTCAGATTTGT...CTGAACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS TCA 90 bp ACACCACTGAGGAACCTGAGCGCTCTTACCACATTTAGCATCTCCTaGAACAATCACGATTTGATTTTGAAGCAGGTTCTCCATAAAGGA +
Preference number: 5 (lower is better)
Translates to: TPLRNLSALTTFSIS*NNHDLILKQVLHKG
Trigger: TCCTTTATGGAGAACCTGCTTCAAAATCAAATCGTGATTGTTTCAGGAGATGCTAAATGTGGTAAGAGCGCTCAGGTTCCTCAGTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000415732.1
CDS TCA 90 bp TCACACATTTGCTGTTCCTTATTCATTGTTGACACAGGGGATAGGTaGTCCACTACTTGCTGTAGAATGTCCTTACTTTCACTAGGAGGC +
Preference number: 5 (lower is better)
Translates to: SHICCSLFIVDTGDR*STTCCRMSLLSLGG
Trigger: GCCTCCTAGTGAAAGTAAGGACATTCTACAGCAAGTAGTGGATCACCTATCCCCTGTGTCAACAATGAATAAGGAACAGCAAATGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp AGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACATTTTCAGAGGAAGAGTTaGGACACTCCAGCCCTTCTT +
Preference number: 5 (lower is better)
Translates to: RLSSSTKSRVLSHVSLTHFQRKS*DTPALL
Trigger: AAGAAGGGCTGGAGTGTCCAAACTCTTCCTCTGAAA...ATGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR CAA 90 bp TCCTGTGGATGTGAAATCCGTCTTCGCGTCATGTATCTCCCATATCCAGCAGTTCAAGTAACACATCAGTaGCAATGCTTCTTTCATGAA +
Preference number: 5 (lower is better)
Translates to: SCGCEIRLRVMYLPYPAVQVTHQ*QCFFHE
Trigger: TTCATGAAAGAAGCATTGCAACTGATGTGTTACTTG...AACTGCTGGATATGGGAGATACATGACGCGAAGACGGATTTCACATCCACAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR CAA 90 bp TTATTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGAGTGGCGTCATGTCTTaGGAGGCAAATTCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: LFRLSSSTKSRVLSHVSLSGVMS*EANSSV
Trigger: CACTGAAGAATTTGCCTCCAAAGACATGACGCCACT...CAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp TTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACATGTGAAAAGCAATTaGGAGCTGTTACCATGGCTG +
Preference number: 5 (lower is better)
Translates to: FRLSSSTKSRVLSHVSLTHVKSN*ELLPWL
Trigger: CAGCCATGGTAACAGCTCCAAATTGCTTTTCACATG...TGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp AGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACATCATGTGAAAAGCAATTaGGAGCTGTTACCATGGCTG +
Preference number: 5 (lower is better)
Translates to: RLSSSTKSRVLSHVSLTHHVKSN*ELLPWL
Trigger: CAGCCATGGTAACAGCTCCAAATTGCTTTTCACATG...ATGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp TTATTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGTTACCATGGCTGCGATaGTTAGCACTTCATCTACAC +
Preference number: 5 (lower is better)
Translates to: LFRLSSSTKSRVLSHVSLLPWLR*LALHLH
Trigger: GTGTAGATGAAGTGCTAACAATCGCAGCCATGGTAA...CAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp TTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACAGTTCCTTATTCATTGTaGACACAGGGGATAGGTGAT +
Preference number: 5 (lower is better)
Translates to: FRLSSSTKSRVLSHVSLTVPYSL*TQGIGD
Trigger: ATCACCTATCCCCTGTGTCAACAATGAATAAGGAAC...TGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp AGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACATGCACGTCTCACACATTaGCTGTTCCTTATTCATTGT +
Preference number: 5 (lower is better)
Translates to: RLSSSTKSRVLSHVSLTHARLTH*LFLIHC
Trigger: ACAATGAATAAGGAACAGCAAATGTGTGAGACGTGC...ATGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS TCA 90 bp TCACAGGCCAGAAAGACTACAATGTCACCTTTCTCACCCGAGTGGTaGATTTCAAAGATAAGGCGTAAAATAGACTCAAAAGAATCCTTT +
Preference number: 5 (lower is better)
Translates to: SQARKTTMSPFSPEW*ISKIRRKIDSKESF
Trigger: AAAGGATTCTTTTGAGTCTATTTTACGCCTTATCTTTGAAATTCACCACTCGGGTGAGAAAGGTGACATTGTAGTCTTTCTGGCCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS-3UTR CAA 90 bp AGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACATGTTTCATCGAGTGGCTaGAACAATGAACATTTCTCT +
Preference number: 5 (lower is better)
Translates to: RLSSSTKSRVLSHVSLTHVSSSG*NNEHFS
Trigger: AGAGAAATGTTCATTGTTCAAGCCACTCGATGAAAC...ATGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp TTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACAATTCAGAGTTGTGTCTaGGTAAGCCTTGTAAATGCT +
Preference number: 5 (lower is better)
Translates to: FRLSSSTKSRVLSHVSLTIQSCV*VSLVNA
Trigger: AGCATTTACAAGGCTTACCAAGACACAACTCTGAAT...TGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp AGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACATGGAAGCTCGATTCGCTaGATAATTTCTAAGAGTTCA +
Preference number: 5 (lower is better)
Translates to: RLSSSTKSRVLSHVSLTHGSSIR*IISKSS
Trigger: TGAACTCTTAGAAATTATCAAGCGAATCGAGCTTCC...ATGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp TTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACAGGAAGCTCGATTCGCTaGATAATTTCTAAGAGTTCA +
Preference number: 5 (lower is better)
Translates to: FRLSSSTKSRVLSHVSLTGSSIR*IISKSS
Trigger: TGAACTCTTAGAAATTATCAAGCGAATCGAGCTTCC...TGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS-3UTR CAA 90 bp TTATTCAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGCAAACAGCATGGCTGTaGATCCTAATGAGTGAAAAC +
Preference number: 5 (lower is better)
Translates to: LFRLSSSTKSRVLSHVSLQTAWL*ILMSEN
Trigger: GTTTTCACTCATTAGGATCAACAGCCATGCTGTTTG...CAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368721.5
CDS CAA 72 bp TCCGCCACCCGCAGGGCGAGCTGGACCACAGTCTGCTaGTGGACCTGTGTGCATATCACGCCCCCGTGCTGG +
Preference number: 6 (lower is better)
Translates to: SATRRASWTTVC*WTCVHITPPCW
Trigger: CCAGCACGGGGGCGTGATATGCACACAGGTCCACAAGCAGACTGTGGTCCAGCTCGCCCTGCGGGTGGCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS CCA 72 bp CTGGGCAGAGGCCGCTCCAGGGGGTCCCACATCAGCTaGTACACAGGTACGGTCCCTTGCTTGCACTTCCTT +
Preference number: 6 (lower is better)
Translates to: LGRGRSRGSHIS*YTGTVPCLHFL
Trigger: AAGGAAGTGCAAGCAAGGGACCGTACCTGTGTACCAGCTGATGTGGGACCCCCTGGAGCGGCCTCTGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368721.5
CDS GCA 72 bp GGGCGAGCTGGACCACAGTCTGCTTGTGGACCTGTGTaGATATCACGCCCCCGTGCTGGTAGTGGATGGAAA +
Preference number: 6 (lower is better)
Translates to: GRAGPQSACGPV*ISRPRAGSGWK
Trigger: TTTCCATCCACTACCAGCACGGGGGCGTGATATGCACACAGGTCCACAAGCAGACTGTGGTCCAGCTCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS GCA 72 bp AGCAGTTCAGCCATCCAGCTACCTTTGGGACCCTGCTaGACCTTGTGTTTGCTGGGGAGTCACTGGAGAGTG +
Preference number: 6 (lower is better)
Translates to: SSSAIQLPLGPC*TLCLLGSHWRV
Trigger: CACTCTCCAGTGACTCCCCAGCAAACACAAGGTGCAGCAGGGTCCCAAAGGTAGCTGGATGGCTGAACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS GCA 72 bp TGCTTGCGTATCTCTGCCTGGCTCTGGCTGATGGGCTaGATGACGAGCGAGTTTGCTCTTATTCTCGGGTTG +
Preference number: 6 (lower is better)
Translates to: CLRISAWLWLMG*MTSEFALILGL
Trigger: CAACCCGAGAATAAGAGCAAACTCGCTCGTCATGCAGCCCATCAGCCAGAGCCAGGCAGAGATACGCAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS GCA 72 bp TCCAGCTACCTTTGGGACCCTGCTGCACCTTGTGTTTaGTGGGGAGTCACTGGAGAGTGCATCTCTGTTCAG +
Preference number: 6 (lower is better)
Translates to: SSYLWDPAAPCV*WGVTGECISVQ
Trigger: CTGAACAGAGATGCACTCTCCAGTGACTCCCCAGCAAACACAAGGTGCAGCAGGGTCCCAAAGGTAGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS CCA 72 bp TTAACATCCATTTCATCCGCCACCCGCAGGGCGAGCTaGACCACAGTCTGCTTGTGGACCTGTGTGCATATC +
Preference number: 6 (lower is better)
Translates to: LTSISSATRRAS*TTVCLWTCVHI
Trigger: GATATGCACACAGGTCCACAAGCAGACTGTGGTCCAGCTCGCCCTGCGGGTGGCGGATGAAATGGATGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS CCA 72 bp GAGCCAAGAATCTGCTTGCGTATCTCTGCCTGGCTCTaGCTGATGGGCTGCATGACGAGCGAGTTTGCTCTT +
Preference number: 6 (lower is better)
Translates to: EPRICLRISAWL*LMGCMTSEFAL
Trigger: AAGAGCAAACTCGCTCGTCATGCAGCCCATCAGCCAGAGCCAGGCAGAGATACGCAAGCAGATTCTTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS CAA 72 bp TCTCCCATATCCAGCAGTTCAGCCATCCAGCTACCTTaGGGACCCTGCTGCACCTTGTGTTTGCTGGGGAGT +
Preference number: 6 (lower is better)
Translates to: SPISSSSAIQLP*GPCCTLCLLGS
Trigger: ACTCCCCAGCAAACACAAGGTGCAGCAGGGTCCCAAAGGTAGCTGGATGGCTGAACTGCTGGATATGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS CCA 72 bp GAAGATGAGCCAAGAATCTGCTTGCGTATCTCTGCCTaGCTCTGGCTGATGGGCTGCATGACGAGCGAGTTT +
Preference number: 6 (lower is better)
Translates to: EDEPRICLRISA*LWLMGCMTSEF
Trigger: AAACTCGCTCGTCATGCAGCCCATCAGCCAGAGCCAGGCAGAGATACGCAAGCAGATTCTTGGCTCATCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS CCA 72 bp CCTGTGTGCATATCACGCCCCCGTGCTGGTAGTGGATaGAAAGACAATATTCAGCACACCACTGAGGAACCT +
Preference number: 6 (lower is better)
Translates to: PVCISRPRAGSG*KDNIQHTTEEP
Trigger: AGGTTCCTCAGTGGTGTGCTGAATATTGTCTTTCCATCCACTACCAGCACGGGGGCGTGATATGCACACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS CCA 72 bp AGCTACCTTTGGGACCCTGCTGCACCTTGTGTTTGCTaGGGAGTCACTGGAGAGTGCATCTCTGTTCAGTTT +
Preference number: 6 (lower is better)
Translates to: SYLWDPAAPCVC*GVTGECISVQF
Trigger: AAACTGAACAGAGATGCACTCTCCAGTGACTCCCCAGCAAACACAAGGTGCAGCAGGGTCCCAAAGGTAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS GCA 72 bp CTGGCTCTGGCTGATGGGCTGCATGACGAGCGAGTTTaGTCTTATTCTCGGGTTGTACACCTTTCTTCTTTC +
Preference number: 6 (lower is better)
Translates to: LALADGLHDERV*SYSRVVHLSSF
Trigger: GAAAGAAGAAAGGTGTACAACCCGAGAATAAGAGCAAACTCGCTCGTCATGCAGCCCATCAGCCAGAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS CAA 72 bp GAAGAGTTTGGACACTCCAGCCCTTCTTCTTCCATCTaGTCTGACAGTGAGCTCACGCAGCTGACATTCCAC +
Preference number: 6 (lower is better)
Translates to: EEFGHSSPSSSI*SDSELTQLTFH
Trigger: GTGGAATGTCAGCTGCGTGAGCTCACTGTCAGACAAGATGGAAGAAGAAGGGCTGGAGTGTCCAAACTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000415732.1
CDS GCA 72 bp ACCTGCATCTGTTCTCCGTTGCTGTGTTACCCACTGTaGTGGCTCACTACAGCACTCTTCGGCATTGTAAAT +
Preference number: 6 (lower is better)
Translates to: TCICSPLLCYPL*WLTTALFGIVN
Trigger: ATTTACAATGCCGAAGAGTGCTGTAGTGAGCCAGCACAGTGGGTAACACAGCAACGGAGAACAGATGCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000415732.1
CDS TCA 72 bp ATTTATGGAAGAGGACCCACTCTGGCATCTTCTTGGTaGTTGAGTAACCAGACAGGGGATGCAGCTGAGCAA +
Preference number: 6 (lower is better)
Translates to: IYGRGPTLASSW*LSNQTGDAAEQ
Trigger: TTGCTCAGCTGCATCCCCTGTCTGGTTACTCAATCACCAAGAAGATGCCAGAGTGGGTCCTCTTCCATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS TCA 72 bp AAAATAGCAAGGTATCACAGGTCACTGAGAACTAGGTaGGCTGTGCTCGTTTCCTGGTCTGCTAAGTGGCTC +
Preference number: 6 (lower is better)
Translates to: KIARYHRSLRTR*AVLVSWSAKWL
Trigger: GAGCCACTTAGCAGACCAGGAAACGAGCACAGCTCACCTAGTTCTCAGTGACCTGTGATACCTTGCTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368721.5
CDS GCA 72 bp CAAGTTAAATTCCTCAAACCTGCATCTGTTCTCCGTTaGTGTGTTACCCACTGTGCTGGCTCACTACAGCAC +
Preference number: 6 (lower is better)
Translates to: QVKFLKPASVLR*CVTHCAGSLQH
Trigger: GTGCTGTAGTGAGCCAGCACAGTGGGTAACACAGCAACGGAGAACAGATGCAGGTTTGAGGAATTTAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000415732.1
CDS CCA 72 bp TGCATCTGTTCTCCGTTGCTGTGTTACCCACTGTGCTaGCTCACTACAGCACTCTTCGGCATTGTAAATGAT +
Preference number: 6 (lower is better)
Translates to: CICSPLLCYPLC*LTTALFGIVND
Trigger: ATCATTTACAATGCCGAAGAGTGCTGTAGTGAGCCAGCACAGTGGGTAACACAGCAACGGAGAACAGATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000415732.1
CDS CAA 72 bp AAAAATTTTCCTGAAGAAGATGAGCCAAGAATCTGCTaGCGTATCTCTGCCTGGCTCTGGCTGATGGGCTGC +
Preference number: 6 (lower is better)
Translates to: KNFPEEDEPRIC*RISAWLWLMGC
Trigger: GCAGCCCATCAGCCAGAGCCAGGCAGAGATACGCAAGCAGATTCTTGGCTCATCTTCTTCAGGAAAATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS CAA 90 bp TTTTCAGAGGAAGAGTTTGGACACTCCAGCCCTTCTTCTTCCATCTaGTCTGACAGTGAGCTCACGCAGCTGACATTCCACAAGCAAGTT +
Preference number: 6 (lower is better)
Translates to: FSEEEFGHSSPSSSI*SDSELTQLTFHKQV
Trigger: AACTTGCTTGTGGAATGTCAGCTGCGTGAGCTCACTGTCAGACAAGATGGAAGAAGAAGGGCTGGAGTGTCCAAACTCTTCCTCTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000415732.1
CDS CAA 72 bp CAGGGCACGTCTCACACATTTGCTGTTCCTTATTCATaGTTGACACAGGGGATAGGTGATCCACTACTTGCT +
Preference number: 6 (lower is better)
Translates to: QGTSHTFAVPYS*LTQGIGDPLLA
Trigger: AGCAAGTAGTGGATCACCTATCCCCTGTGTCAACAATGAATAAGGAACAGCAAATGTGTGAGACGTGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS CAA 90 bp CAGTTTCAGGGCACGTCTCACACATTTGCTGTTCCTTATTCATTGTaGACACAGGGGATAGGTGATCCACTACTTGCTGTAGAATGTCCT +
Preference number: 6 (lower is better)
Translates to: QFQGTSHTFAVPYSL*TQGIGDPLLAVECP
Trigger: AGGACATTCTACAGCAAGTAGTGGATCACCTATCCCCTGTGTCAACAATGAATAAGGAACAGCAAATGTGTGAGACGTGCCCTGAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS GCA 72 bp CATCTCTGTTCAGTTTCAGGGCACGTCTCACACATTTaGTGTTCCTTATTCATTGTTGACACAGGGGATAGG +
Preference number: 6 (lower is better)
Translates to: HLCSVSGHVSHI*CSLFIVDTGDR
Trigger: CCTATCCCCTGTGTCAACAATGAATAAGGAACAGCAAATGTGTGAGACGTGCCCTGAAACTGAACAGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS CAA 72 bp GGGATTCAGGAAAATAGCGTTTTTCAGAGGAAGAGTTaGGACACTCCAGCCCTTCTTCTTCCATCTTGTCTG +
Preference number: 6 (lower is better)
Translates to: GIQENSVFQRKS*DTPALLLPSCL
Trigger: CAGACAAGATGGAAGAAGAAGGGCTGGAGTGTCCAAACTCTTCCTCTGAAAAACGCTATTTTCCTGAATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000415732.1
CDS CAA 72 bp TCCTGCATTTCTGCTGGCTTCAGTGGCGTCATGTCTTaGGAGGCAAATTCTTCAGTGTACAGGCAGAAAAAT +
Preference number: 6 (lower is better)
Translates to: SCISAGFSGVMS*EANSSVYRQKN
Trigger: ATTTTTCTGCCTGTACACTGAAGAATTTGCCTCCAAAGACATGACGCCACTGAAGCCAGCAGAAATGCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS CAA 90 bp GTTCAGTTTCAGGGCACGTCTCACACATTTGCTGTTCCTTATTCATaGTTGACACAGGGGATAGGTGATCCACTACTTGCTGTAGAATGT +
Preference number: 6 (lower is better)
Translates to: VQFQGTSHTFAVPYS*LTQGIGDPLLAVEC
Trigger: ACATTCTACAGCAAGTAGTGGATCACCTATCCCCTGTGTCAACAATGAATAAGGAACAGCAAATGTGTGAGACGTGCCCTGAAACTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS TCA 72 bp GAGTTCAGCTCGAATAACATCTGCCATTCTGAGTGCTaGACAGTTGAGGAAGTAATCACGACACCACTTTTC +
Preference number: 6 (lower is better)
Translates to: EFSSNNICHSEC*TVEEVITTPLF
Trigger: GAAAAGTGGTGTCGTGATTACTTCCTCAACTGTTCAGCACTCAGAATGGCAGATGTTATTCGAGCTGAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS CCA 72 bp GCATATCATCAGTACAATACCTCAGGATTGTTTCGTTaGTACAGCAGTTCTCGAAAGGGATCACGTAGCCAA +
Preference number: 6 (lower is better)
Translates to: AYHQYNTSGLFR*YSSSRKGSRSQ
Trigger: TTGGCTACGTGATCCCTTTCGAGAACTGCTGTACCAACGAAACAATCCTGAGGTATTGTACTGATGATATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284690.4
CDS TCA 72 bp AGGAACCTGAGCGCTCTTACCACATTTAGCATCTCCTaGAACAATCACGATTTGATTTTGAAGCAGGTTCTC +
Preference number: 6 (lower is better)
Translates to: RNLSALTTFSIS*NNHDLILKQVL
Trigger: GAGAACCTGCTTCAAAATCAAATCGTGATTGTTTCAGGAGATGCTAAATGTGGTAAGAGCGCTCAGGTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000415732.1
CDS CAA 72 bp CACACAGTACTCACTGCTAGAATTCAGAGTTGTGTCTaGGTAAGCCTTGTAAATGCTGATGAGGGTAAAGTG +
Preference number: 6 (lower is better)
Translates to: HTVLTARIQSCV*VSLVNADEGKV
Trigger: CACTTTACCCTCATCAGCATTTACAAGGCTTACCAAGACACAACTCTGAATTCTAGCAGTGAGTACTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS TCA 72 bp TGCTGTTCCTTATTCATTGTTGACACAGGGGATAGGTaGTCCACTACTTGCTGTAGAATGTCCTTACTTTCA +
Preference number: 6 (lower is better)
Translates to: CCSLFIVDTGDR*STTCCRMSLLS
Trigger: TGAAAGTAAGGACATTCTACAGCAAGTAGTGGATCACCTATCCCCTGTGTCAACAATGAATAAGGAACAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000368721.5
CDS GCA 72 bp CATTCCACAAGCAAGTTTCTCCTATCAGTAACCCATTaGAAACAGGGCTTAAAAGCCTATTTATACAAACCC +
Preference number: 6 (lower is better)
Translates to: HSTSKFLLSVTH*KQGLKAYLYKP
Trigger: GGGTTTGTATAAATAGGCTTTTAAGCCCTGTTTGCAATGGGTTACTGATAGGAGAAACTTGCTTGTGGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284690.4
ENST00000415732.1
CDS TCA 72 bp AGAAAGACTACAATGTCACCTTTCTCACCCGAGTGGTaGATTTCAAAGATAAGGCGTAAAATAGACTCAAAA +
Preference number: 6 (lower is better)
Translates to: RKTTMSPFSPEW*ISKIRRKIDSK
Trigger: TTTTGAGTCTATTTTACGCCTTATCTTTGAAATTCACCACTCGGGTGAGAAAGGTGACATTGTAGTCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284690.4