Pregenerated sensors for DHX29 (Homo sapiens)
Ensembl gene IDs: ENSG00000067248Ensembl transcript IDs: ENST00000251636.10, ENST00000504778.5, ENST00000513447.1, ENST00000621106.4
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | ATTATTTTCCCTTCTGGGTCTATAGGGTTTAAATTCTaGAGACATCAAGGACTGATAGGGGATGAGGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: IIFPSGSIGFKF*RHQGLIGDEAA Trigger: AGCTGCCTCATCCCCTATCAGTCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGAAGGGAAAATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR GCA 90 bp | ATAGGGTTTAAATTCTGCAGACATCAAGGACTGATAGGGGATGAGGCAGCTACACCCCGGCTCCGGGGCTaGCACCCTGCGCTTCGATCC | + |
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Preference number: 4 (lower is better) Translates to: IGFKFCRHQGLIGDEAATPRLRG*HPALRS Trigger: GGATCGAAGCGCAGGGTGGCAGCCCCGGAGCCGGGG...TGTAGCTGCCTCATCCCCTATCAGTCCTTGATGTCTGCAGAATTTAAACCCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR CCA 90 bp | GAGATTATTTTCCCTTCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGACGGCAGCGGCAGCGGTaGCCGGCCTGGACACTGGCT | + |
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Preference number: 4 (lower is better) Translates to: EIIFPSGSIGFKFCRHQGRQRQR*PAWTLA Trigger: AGCCAGTGTCCAGGCCGGCCACCGCTGCCGCTGCCG...TCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGAAGGGAAAATAATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR GCA 90 bp | ATTTTCCCTTCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGACTGATACCGGGGCTGCCACCCTaGGCTTCGATCCGGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: IFPSGSIGFKFCRHQGLIPGLPP*ASIRAS Trigger: AGAAGCCCGGATCGAAGCGCAGGGTGGCAGCCCCGG...TATCAGTCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGAAGGGAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR GCA 90 bp | ATAGGGTTTAAATTCTGCAGACATCAAGGACTGATAGGGGATGAGGCAGCTACACCCCGACGGTACCACTaGACAGCCGAGAGCTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: IGFKFCRHQGLIGDEAATPRRYH*TAESSS Trigger: TGAAGAGCTCTCGGCTGTGCAGTGGTACCGTCGGGG...TGTAGCTGCCTCATCCCCTATCAGTCCTTGATGTCTGCAGAATTTAAACCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR TCA 90 bp | TCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGACTGATAGGGGATGAGAGGACTGATAGGGGATaGGGCAGCTACACAGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: SGSIGFKFCRHQGLIGDERTDRG*GSYTGN Trigger: ATTCCCTGTGTAGCTGCCTCATCCCCTATCAGTCCT...CTCATCCCCTATCAGTCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR GCA 90 bp | ATAGGGTTTAAATTCTGCAGACATCAAGGACTGATAGGGGATGAGGCAGCTACAGGTGTACTTGTGCTTTaGCTTGGGCCGTCTCCACAA | + |
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Preference number: 4 (lower is better) Translates to: IGFKFCRHQGLIGDEAATGVLVL*LGPSPQ Trigger: TTGTGGAGACGGCCCAAGGCAAAGCACAAGTACACC...TGTAGCTGCCTCATCCCCTATCAGTCCTTGATGTCTGCAGAATTTAAACCCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR CCA 90 bp | GAGATTATTTTCCCTTCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGACAGCGGTGGCCGGCCTaGACACTGGCTTCTTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: EIIFPSGSIGFKFCRHQGQRWPA*TLASCF Trigger: AAAGCAAGAAGCCAGTGTCCAGGCCGGCCACCGCTG...TCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGAAGGGAAAATAATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR TCA 90 bp | GAGATTATTTTCCCTTCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGATTTTTGGACCTTGCTTaGCACGGGGCTCCCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: EIIFPSGSIGFKFCRHQGFLDLA*HGAPWS Trigger: GCTCCAGGGAGCCCCGTGTCAAGCAAGGTCCAAAAA...TCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGAAGGGAAAATAATCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR GCA 90 bp | ACAGATACCACAGACATAGGCCTTGCCCTTATTAACACAACGATGAGCAAAACAACTCCCTGTTTCACCTaGCACAACCACTACCCGATG | + |
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Preference number: 4 (lower is better) Translates to: TDTTDIGLALINTTMSKTTPCFT*HNHYPM Trigger: CATCGGGTAGTGGTTGTGGCAGGTGAAACAGGGAGT...TGTTTTGCTCATCGTTGTGTTAATAAGGGCAAGGCCTATGTCTGTGGTATCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR CCA 90 bp | ATTTTCCCTTCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGACTGATACAGCCTCGGCAGATTTaGCTCTGGAAGCAGACACGG | + |
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Preference number: 4 (lower is better) Translates to: IFPSGSIGFKFCRHQGLIQPRQI*LWKQTR Trigger: CCGTGTCTGCTTCCAGAGCCAAATCTGCCGAGGCTG...TATCAGTCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGAAGGGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR CCA 90 bp | ATAGGGTTTAAATTCTGCAGACATCAAGGACTGATAGGGGATGAGGCAGCTACAAATCTTCCTGACTCCTaGAGGGGGAAGTGTGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: IGFKFCRHQGLIGDEAATNLPDS*RGKCEC Trigger: GCATTCACACTTCCCCCTCCAGGAGTCAGGAAGATT...TGTAGCTGCCTCATCCCCTATCAGTCCTTGATGTCTGCAGAATTTAAACCCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR TCA 90 bp | TCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGACTGATAGGGGATGAGTCCTCCGGCAGTATGTaGTTTCAGAACGATAACCTC | + |
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Preference number: 4 (lower is better) Translates to: SGSIGFKFCRHQGLIGDESSGSM*FQNDNL Trigger: GAGGTTATCGTTCTGAAATCACATACTGCCGGAGGA...CTCATCCCCTATCAGTCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR TCA 90 bp | ATAGGGTTTAAATTCTGCAGACATCAAGGACTGATAGGGGATGAGGCAGCTACAAGACGTTCTCGGTGCTaGACTTCTATATCACCACCA | + |
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Preference number: 4 (lower is better) Translates to: IGFKFCRHQGLIGDEAATRRSRC*TSISPP Trigger: TGGTGGTGATATAGAAGTTCAGCACCGAGAACGTCT...TGTAGCTGCCTCATCCCCTATCAGTCCTTGATGTCTGCAGAATTTAAACCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR GCA 90 bp | ATTTTCCCTTCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGACTGATAGGATGGGTGTACTTGTaGTTTGCCTTGGGCCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IFPSGSIGFKFCRHQGLIGWVYL*FALGRL Trigger: GAGACGGCCCAAGGCAAAGCACAAGTACACCCATCC...TATCAGTCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGAAGGGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR CCA 90 bp | ATTTTCCCTTCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGACTGATAACTGGCTTCTTGCTTTaGGCCTCCCCGGCAATTCCA | + |
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Preference number: 4 (lower is better) Translates to: IFPSGSIGFKFCRHQGLITGFLL*ASPAIP Trigger: TGGAATTGCCGGGGAGGCCCAAAGCAAGAAGCCAGT...TATCAGTCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGAAGGGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR CCA 90 bp | ACAGATACCACAGACATAGGCCTTGCCCTTATTAACACAACGATGAGCAAAACAACTTGTGCTTTGCCTTaGGCCGTCTCCACAATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TDTTDIGLALINTTMSKTTCALP*AVSTMQ Trigger: TTGCATTGTGGAGACGGCCCAAGGCAAAGCACAAGT...TGTTTTGCTCATCGTTGTGTTAATAAGGGCAAGGCCTATGTCTGTGGTATCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR TCA 90 bp | ATAGGGTTTAAATTCTGCAGACATCAAGGACTGATAGGGGATGAGGCAGCTACACAAATCTCGATTTACTaGGGATGGGTGTACTTGTGC | + |
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Preference number: 4 (lower is better) Translates to: IGFKFCRHQGLIGDEAATQISIY*GWVYLC Trigger: GCACAAGTACACCCATCCTCAGTAAATCGAGATTTG...TGTAGCTGCCTCATCCCCTATCAGTCCTTGATGTCTGCAGAATTTAAACCCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR TCA 90 bp | GAGATTATTTTCCCTTCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGACTAAAACAATCTTCCTaGCTCCTGGAGGGGGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: EIIFPSGSIGFKFCRHQGLKQSS*LLEGEV Trigger: CACTTCCCCCTCCAGGAGTCAGGAAGATTGTTTTAG...TCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGAAGGGAAAATAATCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR TCA 90 bp | ACAGATACCACAGACATAGGCCTTGCCCTTATTAACACAACGATGAGCAAAACAAATTCATTGCATTGCTaGTCACTTGGAGCTGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: TDTTDIGLALINTTMSKTNSLHC*SLGAEE Trigger: CTCCTCAGCTCCAAGTGATCAGCAATGCAATGAATT...TGTTTTGCTCATCGTTGTGTTAATAAGGGCAAGGCCTATGTCTGTGGTATCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR GCA 90 bp | ATTTTCCCTTCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGACTGATAAGGGGGAAGTGTGAATaGTGCAGCTTGATCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: IFPSGSIGFKFCRHQGLIRGKCE*CSLILG Trigger: ACCCAAGATCAAGCTGCAGCATTCACACTTCCCCCT...TATCAGTCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGAAGGGAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR CCA 90 bp | ACAGATACCACAGACATAGGCCTTGCCCTTATTAACACAACGATGAGCAAAACAAGAAGGGCAATTTCTTaGAATGAGAGGGTCTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: TDTTDIGLALINTTMSKTRRAIS*NERVCE Trigger: CTCACAGACCCTCTCATTCCAAGAAATTGCCCTTCT...TGTTTTGCTCATCGTTGTGTTAATAAGGGCAAGGCCTATGTCTGTGGTATCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR GCA 90 bp | TCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGACTGATAGGGGATGAGTGTTGCTGCTGTTGCTaGTGTTTCAGTTTATTCAGA | + |
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Preference number: 4 (lower is better) Translates to: SGSIGFKFCRHQGLIGDECCCCC*CFSLFR Trigger: TCTGAATAAACTGAAACAGCAGCAACAGCAGCAACA...CTCATCCCCTATCAGTCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR GCA 90 bp | ACAGATACCACAGACATAGGCCTTGCCCTTATTAACACAACGATGAGCAAAACATCGGAGCAAATTCATTaGATTGCTGATCACTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: TDTTDIGLALINTTMSKTSEQIH*IADHLE Trigger: CTCCAAGTGATCAGCAATGCAATGAATTTGCTCCGA...TGTTTTGCTCATCGTTGTGTTAATAAGGGCAAGGCCTATGTCTGTGGTATCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR TCA 90 bp | GAGATTATTTTCCCTTCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGACTTCAAATTCCTGACTaGATCCTTCAGGAAGTGCAT | + |
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Preference number: 4 (lower is better) Translates to: EIIFPSGSIGFKFCRHQGLQIPD*ILQEVH Trigger: ATGCACTTCCTGAAGGATTCAGTCAGGAATTTGAAG...TCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGAAGGGAAAATAATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR TCA 90 bp | ACAGATACCACAGACATAGGCCTTGCCCTTATTAACACAACGATGAGCAAAACATGGACACTTCTTTCATaGACCTCATCTACAATAACA | + |
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Preference number: 4 (lower is better) Translates to: TDTTDIGLALINTTMSKTWTLLS*TSSTIT Trigger: TGTTATTGTAGATGAGGTTCATGAAAGAAGTGTCCA...TGTTTTGCTCATCGTTGTGTTAATAAGGGCAAGGCCTATGTCTGTGGTATCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR TCA 90 bp | GAGATTATTTTCCCTTCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGAAGCTTGATCTTGGGTTaGAAGAATAGAATGCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: EIIFPSGSIGFKFCRHQGSLILG*KNRMQS Trigger: GCTCTGCATTCTATTCTTTCAACCCAAGATCAAGCT...TCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGAAGGGAAAATAATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR TCA 90 bp | ACAGATACCACAGACATAGGCCTTGCCCTTATTAACACAACGATGAGCAAAACATATAAGAGCCATCCATaGGTTTGCAAATCTCGATTT | + |
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Preference number: 4 (lower is better) Translates to: TDTTDIGLALINTTMSKTYKSHP*VCKSRF Trigger: AAATCGAGATTTGCAAACTCATGGATGGCTCTTATA...TGTTTTGCTCATCGTTGTGTTAATAAGGGCAAGGCCTATGTCTGTGGTATCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR GCA 90 bp | TCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGACTGATAGGGGATGAGATAGGGTTTAAATTCTaGAGACATCAAGGACTGATA | + |
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Preference number: 4 (lower is better) Translates to: SGSIGFKFCRHQGLIGDEIGFKF*RHQGLI Trigger: TATCAGTCCTTGATGTCTGCAGAATTTAAACCCTAT...CTCATCCCCTATCAGTCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR CCA 90 bp | ATTTTCCCTTCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGACTGATATTTCGCTGTCCACAGTaGCACTCATTAGAATCAAGT | + |
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Preference number: 4 (lower is better) Translates to: IFPSGSIGFKFCRHQGLIFRCPQ*HSLESS Trigger: ACTTGATTCTAATGAGTGCCACTGTGGACAGCGAAA...TATCAGTCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGAAGGGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR GCA 90 bp | ACAGATACCACAGACATAGGCCTTGCCCTTATTAACACAACGATGAGCAAAACAGTTTTTGTTTTAGGTTaGAATGGAGGTGAAATAGTG | + |
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Preference number: 4 (lower is better) Translates to: TDTTDIGLALINTTMSKTVFVLG*NGGEIV Trigger: CACTATTTCACCTCCATTGCAACCTAAAACAAAAAC...TGTTTTGCTCATCGTTGTGTTAATAAGGGCAAGGCCTATGTCTGTGGTATCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR GCA 90 bp | GAGATTATTTTCCCTTCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGAATGAGAACTCTCAGCTaGTTGAAAATGACAGCTATC | + |
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Preference number: 4 (lower is better) Translates to: EIIFPSGSIGFKFCRHQGMRTLS*LKMTAI Trigger: GATAGCTGTCATTTTCAAGCAGCTGAGAGTTCTCAT...TCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGAAGGGAAAATAATCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR CCA 90 bp | GAGATTATTTTCCCTTCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGAAGAGTGTATTGGTCATaGCATCTTCAATGTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: EIIFPSGSIGFKFCRHQGRVYWS*HLQCPL Trigger: CAAAGGACATTGAAGATGCCATGACCAATACACTCT...TCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGAAGGGAAAATAATCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR CCA 90 bp | GAGATTATTTTCCCTTCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGAAAACATCTCGGTAAGTaGGAGGAAGTAACTGATGAA | + |
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Preference number: 4 (lower is better) Translates to: EIIFPSGSIGFKFCRHQGKHLGK*EEVTDE Trigger: TTCATCAGTTACTTCCTCCCACTTACCGAGATGTTT...TCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGAAGGGAAAATAATCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR CCA 90 bp | ATTTTCCCTTCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGACTGATATGCTCCAGTCTGAACTaGGATGTATTCCTGATATTT | + |
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Preference number: 4 (lower is better) Translates to: IFPSGSIGFKFCRHQGLICSSLN*DVFLIF Trigger: AAATATCAGGAATACATCCCAGTTCAGACTGGAGCA...TATCAGTCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGAAGGGAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR CCA 90 bp | ATTTTCCCTTCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGACTGATACTCTCAAATACACTCTaGCATACCTTATCTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: IFPSGSIGFKFCRHQGLILSNTL*HTLSSP Trigger: AGGAGAAGATAAGGTATGCCAGAGTGTATTTGAGAG...TATCAGTCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGAAGGGAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR CAA 90 bp | ATAGGGTTTAAATTCTGCAGACATCAAGGACTGATAGGGGATGAGGCAGCTACACCAGCCTCGGCAGATTaGGCTCTGGAAGCAGACACG | + |
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Preference number: 5 (lower is better) Translates to: IGFKFCRHQGLIGDEAATPASAD*ALEADT Trigger: CGTGTCTGCTTCCAGAGCCAAATCTGCCGAGGCTGG...TGTAGCTGCCTCATCCCCTATCAGTCCTTGATGTCTGCAGAATTTAAACCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR CAA 90 bp | TCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGACTGATAGGGGATGAGCACTGGCTTCTTGCTTaGGGCCTCCCCGGCAATTCC | + |
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Preference number: 5 (lower is better) Translates to: SGSIGFKFCRHQGLIGDEHWLLA*GLPGNS Trigger: GGAATTGCCGGGGAGGCCCAAAGCAAGAAGCCAGTG...CTCATCCCCTATCAGTCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR CAA 90 bp | TCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGACTGATAGGGGATGAGGGGTGTACTTGTGCTTaGCCTTGGGCCGTCTCCACA | + |
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Preference number: 5 (lower is better) Translates to: SGSIGFKFCRHQGLIGDEGCTCA*PWAVST Trigger: TGTGGAGACGGCCCAAGGCAAAGCACAAGTACACCC...CTCATCCCCTATCAGTCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS CCA 90 bp | TCATACAGTCCAGCCACCAGTACAGCTTTAAGAAGGGCAATTTCTTaGAATGAGAGGGTCTGTGAGGCTCTGTTTCCTTCCCAGCTGGTA | + |
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Preference number: 5 (lower is better) Translates to: SYSPATSTALRRAIS*NERVCEALFPSQLV Trigger: TACCAGCTGGGAAGGAAACAGAGCCTCACAGACCCTCTCATTCCAAGAAATTGCCCTTCTTAAAGCTGTACTGGTGGCTGGACTGTATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000251636.10 ENST00000504778.5 ENST00000621106.4 |
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| CDS-3UTR CAA 90 bp | ATAGGGTTTAAATTCTGCAGACATCAAGGACTGATAGGGGATGAGGCAGCTACATACTTGTGCTTTGCCTaGGGCCGTCTCCACAATGCA | + |
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Preference number: 5 (lower is better) Translates to: IGFKFCRHQGLIGDEAATYLCFA*GRLHNA Trigger: TGCATTGTGGAGACGGCCCAAGGCAAAGCACAAGTA...TGTAGCTGCCTCATCCCCTATCAGTCCTTGATGTCTGCAGAATTTAAACCCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS CCA 90 bp | TGCAAATCTCGATTTACTGAGGATGGGTGTACTTGTGCTTTGCCTTaGGCCGTCTCCACAATGCAAGCCAATTTTTCTGTAACATCCACT | + |
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Preference number: 5 (lower is better) Translates to: CKSRFTEDGCTCALP*AVSTMQANFSVTST Trigger: AGTGGATGTTACAGAAAAATTGGCTTGCATTGTGGAGACGGCCCAAGGCAAAGCACAAGTACACCCATCCTCAGTAAATCGAGATTTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000251636.10 ENST00000504778.5 ENST00000621106.4 |
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| CDS-3UTR CAA 90 bp | ACAGATACCACAGACATAGGCCTTGCCCTTATTAACACAACGATGAGCAAAACAATTATCTTCCCCACATaGTCATACAGTCCAGCCACC | + |
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Preference number: 5 (lower is better) Translates to: TDTTDIGLALINTTMSKTIIFPT*SYSPAT Trigger: GGTGGCTGGACTGTATGACAATGTGGGGAAGATAAT...TGTTTTGCTCATCGTTGTGTTAATAAGGGCAAGGCCTATGTCTGTGGTATCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS TCA 90 bp | TTGGGCCGTCTCCACAATGCAAGCCAATTTTTCTGTAACATCCACTaGCTTTGTATAGATTATCTTCCCCACATTGTCATACAGTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: LGRLHNASQFFCNIH*LCIDYLPHIVIQSS Trigger: GCTGGACTGTATGACAATGTGGGGAAGATAATCTATACAAAGTCAGTGGATGTTACAGAAAAATTGGCTTGCATTGTGGAGACGGCCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000251636.10 ENST00000504778.5 ENST00000621106.4 |
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| CDS TCA 90 bp | TACACTCTGGCATACCTTATCTTCTCCTGGTATAAGAGCCATCCATaGGTTTGCAAATCTCGATTTACTGAGGATGGGTGTACTTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: YTLAYLIFSWYKSHP*VCKSRFTEDGCTCA Trigger: AGCACAAGTACACCCATCCTCAGTAAATCGAGATTTGCAAACTCATGGATGGCTCTTATACCAGGAGAAGATAAGGTATGCCAGAGTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000251636.10 ENST00000504778.5 ENST00000621106.4 |
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| CDS-3UTR CAA 90 bp | GAGATTATTTTCCCTTCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGAATAAATTTTTGGACCTaGCTTGACACGGGGCTCCCT | + |
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Preference number: 5 (lower is better) Translates to: EIIFPSGSIGFKFCRHQGINFWT*LDTGLP Trigger: AGGGAGCCCCGTGTCAAGCAAGGTCCAAAAATTTAT...TCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGAAGGGAAAATAATCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR CAA 90 bp | ACAGATACCACAGACATAGGCCTTGCCCTTATTAACACAACGATGAGCAAAACAAGAACTCTCAGCTGCTaGAAAATGACAGCTATCTTT | + |
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Preference number: 5 (lower is better) Translates to: TDTTDIGLALINTTMSKTRTLSC*KMTAIF Trigger: AAAGATAGCTGTCATTTTCAAGCAGCTGAGAGTTCT...TGTTTTGCTCATCGTTGTGTTAATAAGGGCAAGGCCTATGTCTGTGGTATCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR CAA 90 bp | ACAGATACCACAGACATAGGCCTTGCCCTTATTAACACAACGATGAGCAAAACAATGATCTGCAGAATCTaGTCATTTTCAAGGGACATC | + |
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Preference number: 5 (lower is better) Translates to: TDTTDIGLALINTTMSKTMICRI*SFSRDI Trigger: GATGTCCCTTGAAAATGACAAGATTCTGCAGATCAT...TGTTTTGCTCATCGTTGTGTTAATAAGGGCAAGGCCTATGTCTGTGGTATCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR CAA 90 bp | GAGATTATTTTCCCTTCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGATCATCACATACTCTGTaGGCTAAACTAACTGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: EIIFPSGSIGFKFCRHQGSSHTL*AKLTAE Trigger: CTCAGCAGTTAGTTTAGCCAACAGAGTATGTGATGA...TCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGAAGGGAAAATAATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS GCA 90 bp | TCAGAAATGTCACACAATACTGGTTTATGTGTTTTACATTTCCAGTaGTATGCCATACCTTTCTCTTGTGTACATTCGGAAACAGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: SEMSHNTGLCVLHFQ*YAIPFSCVHSETEA Trigger: GGCTTCTGTTTCCGAATGTACACAAGAGAAAGGTATGGCATAGCACTGGAAATGTAAAACACATAAACCAGTATTGTGTGACATTTCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513447.1 |
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| CDS-3UTR CAA 90 bp | ATTTTCCCTTCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGACTGATAAATAGTGGCTTGTATTaGAGGAGACTGAAATTTAGG | + |
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Preference number: 5 (lower is better) Translates to: IFPSGSIGFKFCRHQGLINSGLY*RRLKFR Trigger: CCTAAATTTCAGTCTCCTCAAATACAAGCCACTATT...TATCAGTCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGAAGGGAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS-3UTR CAA 90 bp | GAGATTATTTTCCCTTCTGGGTCTATAGGGTTTAAATTCTGCAGACATCAAGGACTTCAAATCTTTCTCTaGTGTACATTCGGAAACAGA | + |
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Preference number: 5 (lower is better) Translates to: EIIFPSGSIGFKFCRHQGLQIFL*CTFGNR Trigger: TCTGTTTCCGAATGTACACAAGAGAAAGATTTGAAG...TCCTTGATGTCTGCAGAATTTAAACCCTATAGACCCAGAAGGGAAAATAATCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251636.10 |
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| CDS CCA 72 bp | CCAGCCACCAGTACAGCTTTAAGAAGGGCAATTTCTTaGAATGAGAGGGTCTGTGAGGCTCTGTTTCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: PATSTALRRAIS*NERVCEALFPS Trigger: GGAAGGAAACAGAGCCTCACAGACCCTCTCATTCCAAGAAATTGCCCTTCTTAAAGCTGTACTGGTGGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000251636.10 ENST00000504778.5 ENST00000621106.4 |
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| CDS CCA 72 bp | CGATTTACTGAGGATGGGTGTACTTGTGCTTTGCCTTaGGCCGTCTCCACAATGCAAGCCAATTTTTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: RFTEDGCTCALP*AVSTMQANFSV Trigger: TACAGAAAAATTGGCTTGCATTGTGGAGACGGCCCAAGGCAAAGCACAAGTACACCCATCCTCAGTAAATCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000251636.10 ENST00000504778.5 ENST00000621106.4 |
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| CDS GCA 72 bp | AATCTCGATTTACTGAGGATGGGTGTACTTGTGCTTTaGCTTGGGCCGTCTCCACAATGCAAGCCAATTTTT | + |
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Preference number: 6 (lower is better) Translates to: NLDLLRMGVLVL*LGPSPQCKPIF Trigger: AAAAATTGGCTTGCATTGTGGAGACGGCCCAAGGCAAAGCACAAGTACACCCATCCTCAGTAAATCGAGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000251636.10 ENST00000504778.5 ENST00000621106.4 |
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| CDS CAA 72 bp | AAATCTCGATTTACTGAGGATGGGTGTACTTGTGCTTaGCCTTGGGCCGTCTCCACAATGCAAGCCAATTTT | + |
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Preference number: 6 (lower is better) Translates to: KSRFTEDGCTCA*PWAVSTMQANF Trigger: AAAATTGGCTTGCATTGTGGAGACGGCCCAAGGCAAAGCACAAGTACACCCATCCTCAGTAAATCGAGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000251636.10 ENST00000504778.5 ENST00000621106.4 |
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| CDS TCA 72 bp | GCATACCTTATCTTCTCCTGGTATAAGAGCCATCCATaGGTTTGCAAATCTCGATTTACTGAGGATGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: AYLIFSWYKSHP*VCKSRFTEDGC Trigger: ACACCCATCCTCAGTAAATCGAGATTTGCAAACTCATGGATGGCTCTTATACCAGGAGAAGATAAGGTATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000251636.10 ENST00000504778.5 ENST00000621106.4 |
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