Pregenerated sensors for DHX16 (Homo sapiens)
Ensembl gene IDs: ENSG00000204560Ensembl transcript IDs: ENST00000376437.9, ENST00000376442.8, ENST00000383576.7, ENST00000383577.8, ENST00000414052.6, ENST00000415603.1, ENST00000417308.6, ENST00000421095.6, ENST00000424672.6, ENST00000427297.1, ENST00000436662.1, ENST00000445379.6, ENST00000446074.1, ENST00000447945.1, ENST00000448766.1, ENST00000449252.1, ENST00000449861.6, ENST00000450691.1, ENST00000450902.6, ENST00000451456.6, ENST00000451748.6, ENST00000453879.2, ENST00000456005.5, ENST00000458094.6, ENST00000461170.1, ENST00000462469.1, ENST00000477800.1, ENST00000480637.1, ENST00000480966.1, ENST00000481393.1, ENST00000485518.1, ENST00000492529.1
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACGCTCCCTGCTCCCGGCCCTGAAGCGTCGGGCAGCCGCGCTCACTaGTGGGCCGGTCAGAGGCCTGGAGCCCTCGGCTGGAGCCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: TLPAPGPEASGSRAH*WAGQRPGALGWSLS Trigger: GCTGAGGCTCCAGCCGAGGGCTCCAGGCCTCTGACCGGCCCAGCAGTGAGCGCGGCTGCCCGACGCTTCAGGGCCGGGAGCAGGGAGCGT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS CCA 90 bp | CTCCCTGCTCCCGGCCCTGAAGCGTCGGGCAGCCGCGCTCACTGCTaGGCCGGTCAGAGGCCTGGAGCCCTCGGCTGGAGCCTCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: LPAPGPEASGSRAHC*AGQRPGALGWSLSF Trigger: GAAGCTGAGGCTCCAGCCGAGGGCTCCAGGCCTCTGACCGGCCCAGCAGTGAGCGCGGCTGCCCGACGCTTCAGGGCCGGGAGCAGGGAG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS CCA 90 bp | GCAGCTCGTCCTGAACCCAGCGCTCCAGACCCGCCGGCGTCGCCATaGCGACTCACGCTCCCTGCTCCCGGCCCTGAAGCGTCGGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: AARPEPSAPDPPASP*RLTLPAPGPEASGS Trigger: GCTGCCCGACGCTTCAGGGCCGGGAGCAGGGAGCGTGAGTCGCCATGGCGACGCCGGCGGGTCTGGAGCGCTGGGTTCAGGACGAGCTGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS CCA 90 bp | AACTCCTCGGCAGAGGTGCAGCGCTGTGCGGTACCGATCAGAAACTaGGCGACGTGCCGCTCGCTCAGCCCCAACACCGAGTGCAGCTCG | + |
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Preference number: 5 (lower is better) Translates to: NSSAEVQRCAVPIRN*ATCRSLSPNTECSS Trigger: CGAGCTGCACTCGGTGTTGGGGCTGAGCGAGCGGCACGTCGCCCAGTTTCTGATCGGTACCGCACAGCGCTGCACCTCTGCCGAGGAGTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS TCA 90 bp | CTGCCCGGTACTCCCGGGCGAGATCCCGCACTCGCCGCTTATATTTaGGCTCCTGCCGCTCGTGCCGGCTCAGCTCCACGTCCCCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: LPGTPGRDPALAAYI*APAARAGSAPRPQK Trigger: TTTTTGGGGACGTGGAGCTGAGCCGGCACGAGCGGCAGGAGCTCAAATATAAGCGGCGAGTGCGGGATCTCGCCCGGGAGTACCGGGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000415603.1 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000427297.1 ENST00000436662.1 ENST00000446074.1 ENST00000447945.1 ENST00000448766.1 ENST00000449252.1 ENST00000450691.1 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS CCA 90 bp | ACCAGGAGCTCCCGGATTTTGGAGCCCAGGCGGCGGCAGCGATCCTaGAGCATCTCACAGGCAGCCTCAATCTCCTCCTGTCCTGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: TRSSRILEPRRRQRS*SISQAASISSCPVR Trigger: CCTGACAGGACAGGAGGAGATTGAGGCTGCCTGTGAGATGCTCCAGGATCGCTGCCGCCGCCTGGGCTCCAAAATCCGGGAGCTCCTGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 24 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000450902.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000456005.5 ENST00000458094.6 ENST00000461170.1 ENST00000462469.1 ENST00000477800.1 ENST00000480637.1 ENST00000480966.1 ENST00000481393.1 ENST00000485518.1 ENST00000492529.1 |
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| CDS GCA 90 bp | AGGTATCAGTGTCTCGTAGGCGCTGCACGAACTCCTCGGCAGAGGTaGAGCGCTGTGCGGTACCGATCAGAAACTGGGCGACGTGCCGCT | + |
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Preference number: 5 (lower is better) Translates to: RYQCLVGAARTPRQR*SAVRYRSETGRRAA Trigger: AGCGGCACGTCGCCCAGTTTCTGATCGGTACCGCACAGCGCTGCACCTCTGCCGAGGAGTTCGTGCAGCGCCTACGAGACACTGATACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS GCA 90 bp | TACTCCCGGGCGAGATCCCGCACTCGCCGCTTATATTTGAGCTCCTaGCGCTCGTGCCGGCTCAGCTCCACGTCCCCAAAAAGGAACTCC | + |
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Preference number: 5 (lower is better) Translates to: YSRARSRTRRLYLSS*RSCRLSSTSPKRNS Trigger: GGAGTTCCTTTTTGGGGACGTGGAGCTGAGCCGGCACGAGCGGCAGGAGCTCAAATATAAGCGGCGAGTGCGGGATCTCGCCCGGGAGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 16 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000415603.1 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000427297.1 ENST00000436662.1 ENST00000446074.1 ENST00000447945.1 ENST00000448766.1 ENST00000449252.1 ENST00000450691.1 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS GCA 90 bp | CATGTGGTAGCGATTGGTGGCCTCCAGCTTCTCCTGCTCCCCAGCTaGCCGGTACTCCCGGGCGAGATCCCGCACTCGCCGCTTATATTT | + |
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Preference number: 5 (lower is better) Translates to: HVVAIGGLQLLLLPS*PVLPGEIPHSPLIF Trigger: AAATATAAGCGGCGAGTGCGGGATCTCGCCCGGGAGTACCGGGCAGCTGGGGAGCAGGAGAAGCTGGAGGCCACCAATCGCTACCACATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000415603.1 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000427297.1 ENST00000436662.1 ENST00000446074.1 ENST00000447945.1 ENST00000448766.1 ENST00000449252.1 ENST00000450691.1 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS CCA 90 bp | AGGGCAGATTGGCATAAATGGGCAGCACCAGGAGCTCCCGGATTTTaGAGCCCAGGCGGCGGCAGCGATCCTGGAGCATCTCACAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: RADWHKWAAPGAPGF*SPGGGSDPGASHRQ Trigger: CTGCCTGTGAGATGCTCCAGGATCGCTGCCGCCGCCTGGGCTCCAAAATCCGGGAGCTCCTGGTGCTGCCCATTTATGCCAATCTGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 24 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000450902.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000456005.5 ENST00000458094.6 ENST00000461170.1 ENST00000462469.1 ENST00000477800.1 ENST00000480637.1 ENST00000480966.1 ENST00000481393.1 ENST00000485518.1 ENST00000492529.1 |
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| CDS CCA 90 bp | GCTGGAAGATACGGGCCTGCATGTCAGAGGGCAGATTGGCATAAATaGGCAGCACCAGGAGCTCCCGGATTTTGGAGCCCAGGCGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: AGRYGPACQRADWHK*AAPGAPGFWSPGGG Trigger: GCCGCCGCCTGGGCTCCAAAATCCGGGAGCTCCTGGTGCTGCCCATTTATGCCAATCTGCCCTCTGACATGCAGGCCCGTATCTTCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 24 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000450902.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000456005.5 ENST00000458094.6 ENST00000461170.1 ENST00000462469.1 ENST00000477800.1 ENST00000480637.1 ENST00000480966.1 ENST00000481393.1 ENST00000485518.1 ENST00000492529.1 |
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| CDS GCA 90 bp | GCGAGATCCCGCACTCGCCGCTTATATTTGAGCTCCTGCCGCTCGTaGCGGCTCAGCTCCACGTCCCCAAAAAGGAACTCCTCATCAGCC | + |
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Preference number: 5 (lower is better) Translates to: ARSRTRRLYLSSCRS*RLSSTSPKRNSSSA Trigger: GGCTGATGAGGAGTTCCTTTTTGGGGACGTGGAGCTGAGCCGGCACGAGCGGCAGGAGCTCAAATATAAGCGGCGAGTGCGGGATCTCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 16 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000415603.1 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000427297.1 ENST00000436662.1 ENST00000446074.1 ENST00000447945.1 ENST00000448766.1 ENST00000449252.1 ENST00000450691.1 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS TCA 90 bp | GTACCTTGTTCCAGAGTCTCAGGGCGAAGTCCCGGGCCGGCCCACTaGGATCCAAGGTATCAGTGTCTCGTAGGCGCTGCACGAACTCCT | + |
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Preference number: 5 (lower is better) Translates to: VPCSRVSGRSPGPAH*DPRYQCLVGAARTP Trigger: AGGAGTTCGTGCAGCGCCTACGAGACACTGATACCTTGGATCTCAGTGGGCCGGCCCGGGACTTCGCCCTGAGACTCTGGAACAAGGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS TCA 90 bp | CGCTGTCGAACCCGCTCAGCAAAGGCATCACGCTCCTCCAGGTCCTaGAGGCGTTCACGCTCTGTCCGTTCCCACTCATCTTCCGACTCT | + |
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Preference number: 5 (lower is better) Translates to: RCRTRSAKASRSSRS*RRSRSVRSHSSSDS Trigger: AGAGTCGGAAGATGAGTGGGAACGGACAGAGCGTGAACGCCTTCAGGACCTGGAGGAGCGTGATGCCTTTGCTGAGCGGGTTCGACAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000415603.1 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000427297.1 ENST00000436662.1 ENST00000446074.1 ENST00000447945.1 ENST00000448766.1 ENST00000449252.1 ENST00000450691.1 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS TCA 90 bp | TCCGCAGCTCAGGGACCATGGCCTTCCGGTCTTCCTCGGCCATCTTaGGGCGCTTCTGAGCCTCTTCATAAGCCTTCTTGTCTGACCGTT | + |
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Preference number: 5 (lower is better) Translates to: SAAQGPWPSGLPRPS*GASEPLHKPSCLTV Trigger: AACGGTCAGACAAGAAGGCTTATGAAGAGGCTCAGAAGCGCCTCAAGATGGCCGAGGAAGACCGGAAGGCCATGGTCCCTGAGCTGCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000415603.1 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000427297.1 ENST00000436662.1 ENST00000446074.1 ENST00000447945.1 ENST00000448766.1 ENST00000449252.1 ENST00000450691.1 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS TCA 90 bp | GCAGCCAGCGTGGCTGTTGCTCAAAGAGGGAGGAGTTGGGATGAATaGAGACTGTCTGCTGCTGTTTCACTGTGCGGTAGCCACTCCGAG | + |
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Preference number: 5 (lower is better) Translates to: AASVAVAQRGRSWDE*RLSAAVSLCGSHSE Trigger: CTCGGAGTGGCTACCGCACAGTGAAACAGCAGCAGACAGTCTTCATTCATCCCAACTCCTCCCTCTTTGAGCAACAGCCACGCTGGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000458094.6 |
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| CDS GCA 90 bp | TGTCTGCTGCTGTTTCACTGTGCGGTAGCCACTCCGAGTCAACCGTaGCGTGTGGTAAAAGTAACCAGCAGTGATGGCCTTGCGTACACG | + |
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Preference number: 5 (lower is better) Translates to: CLLLFHCAVATPSQP*RVVKVTSSDGLAYT Trigger: CGTGTACGCAAGGCCATCACTGCTGGTTACTTTTACCACACGGCACGGTTGACTCGGAGTGGCTACCGCACAGTGAAACAGCAGCAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000458094.6 |
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| CDS TCA 90 bp | CAGCATGGACGACCTTGTCCTTTGGTCGGTAGAAGATGGAGTTGTTaGCAGAGAGCATGGCAGCCACTGTCAGGATCTCCTCTGAACAGC | + |
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Preference number: 5 (lower is better) Translates to: QHGRPCPLVGRRWSC*QRAWQPLSGSPLNS Trigger: GCTGTTCAGAGGAGATCCTGACAGTGGCTGCCATGCTCTCTGTCAACAACTCCATCTTCTACCGACCAAAGGACAAGGTCGTCCATGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000458094.6 |
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| CDS TCA 90 bp | AAACATTTAGCAGAACCAGGTGGTCACCGCCAGGGAGAAAGAAGTTaGCACGGGCATTGTCAGCATGGACGACCTTGTCCTTTGGTCGGT | + |
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Preference number: 5 (lower is better) Translates to: KHLAEPGGHRQGERS*HGHCQHGRPCPLVG Trigger: ACCGACCAAAGGACAAGGTCGTCCATGCTGACAATGCCCGTGTCAACTTCTTTCTCCCTGGCGGTGACCACCTGGTTCTGCTAAATGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000458094.6 |
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| CDS CCA 90 bp | AAAGAAGTTGACACGGGCATTGTCAGCATGGACGACCTTGTCCTTTaGTCGGTAGAAGATGGAGTTGTTGACAGAGAGCATGGCAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: KEVDTGIVSMDDLVL*SVEDGVVDREHGSH Trigger: GTGGCTGCCATGCTCTCTGTCAACAACTCCATCTTCTACCGACCAAAGGACAAGGTCGTCCATGCTGACAATGCCCGTGTCAACTTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000458094.6 |
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| CDS CCA 90 bp | GAACTCTTTGGTGGTCAAGACAAGTTCGTGGTAGAGCAGCCAGCGTaGCTGTTGCTCAAAGAGGGAGGAGTTGGGATGAATGAAGACTGT | + |
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Preference number: 5 (lower is better) Translates to: ELFGGQDKFVVEQPA*LLLKEGGVGMNEDC Trigger: ACAGTCTTCATTCATCCCAACTCCTCCCTCTTTGAGCAACAGCCACGCTGGCTGCTCTACCACGAACTTGTCTTGACCACCAAAGAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000458094.6 |
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| CDS CCA 90 bp | GGCTGGCTCGATGGGCAAAAACATCTGCATCAGACACTCTTGCGCTaGCTGGCTCTCCATGGGTTCTTAGAGATCTTTTGCAAGGGATAT | + |
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Preference number: 5 (lower is better) Translates to: GWLDGQKHLHQTLLR*LALHGFLEIFCKGY Trigger: ATATCCCTTGCAAAAGATCTCTAAGAACCCATGGAGAGCCAGCCAGCGCAAGAGTGTCTGATGCAGATGTTTTTGCCCATCGAGCCAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000376437.9 ENST00000383576.7 ENST00000414052.6 ENST00000445379.6 ENST00000449861.6 ENST00000451748.6 ENST00000453879.2 ENST00000456005.5 |
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| CDS GCA 90 bp | GTTTCTTCTGGAGGCTGCTTCCAGCCCTACTCACAGTCTCCTCACTaGTCTCTTCACTGTCTTCCAGTAACCTATAAGATCGGTTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: VSSGGCFQPYSQSPH*SLHCLPVTYKIGSS Trigger: AGAAGAACCGATCTTATAGGTTACTGGAAGACAGTGAAGAGAGCAGTGAGGAGACTGTGAGTAGGGCTGGAAGCAGCCTCCAGAAGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000415603.1 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000427297.1 ENST00000436662.1 ENST00000446074.1 ENST00000447945.1 ENST00000448766.1 ENST00000449252.1 ENST00000450691.1 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS TCA 90 bp | CTGGCTGGCTCTCCATGGGTTCTTAGAGATCTTTTGCAAGGGATATaGAGGATAAAATCCTATCTGTCCAATTGCTCCACTGTGATCTTC | + |
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Preference number: 5 (lower is better) Translates to: LAGSPWVLRDLLQGI*RIKSYLSNCSTVIF Trigger: GAAGATCACAGTGGAGCAATTGGACAGATAGGATTTTATCCTTCATATCCCTTGCAAAAGATCTCTAAGAACCCATGGAGAGCCAGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000376437.9 ENST00000383576.7 ENST00000414052.6 ENST00000445379.6 ENST00000449861.6 ENST00000451748.6 ENST00000453879.2 ENST00000456005.5 |
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| CDS GCA 72 bp | GCTCCCGGCCCTGAAGCGTCGGGCAGCCGCGCTCACTaGTGGGCCGGTCAGAGGCCTGGAGCCCTCGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: APGPEASGSRAH*WAGQRPGALGW Trigger: CCAGCCGAGGGCTCCAGGCCTCTGACCGGCCCAGCAGTGAGCGCGGCTGCCCGACGCTTCAGGGCCGGGAGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS CCA 72 bp | CCCGGCCCTGAAGCGTCGGGCAGCCGCGCTCACTGCTaGGCCGGTCAGAGGCCTGGAGCCCTCGGCTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: PGPEASGSRAHC*AGQRPGALGWS Trigger: GCTCCAGCCGAGGGCTCCAGGCCTCTGACCGGCCCAGCAGTGAGCGCGGCTGCCCGACGCTTCAGGGCCGGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS CCA 72 bp | CCTGAACCCAGCGCTCCAGACCCGCCGGCGTCGCCATaGCGACTCACGCTCCCTGCTCCCGGCCCTGAAGCG | + |
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Preference number: 6 (lower is better) Translates to: PEPSAPDPPASP*RLTLPAPGPEA Trigger: CGCTTCAGGGCCGGGAGCAGGGAGCGTGAGTCGCCATGGCGACGCCGGCGGGTCTGGAGCGCTGGGTTCAGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS GCA 72 bp | GCGATTGGTGGCCTCCAGCTTCTCCTGCTCCCCAGCTaGCCGGTACTCCCGGGCGAGATCCCGCACTCGCCG | + |
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Preference number: 6 (lower is better) Translates to: AIGGLQLLLLPS*PVLPGEIPHSP Trigger: CGGCGAGTGCGGGATCTCGCCCGGGAGTACCGGGCAGCTGGGGAGCAGGAGAAGCTGGAGGCCACCAATCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000415603.1 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000427297.1 ENST00000436662.1 ENST00000446074.1 ENST00000447945.1 ENST00000448766.1 ENST00000449252.1 ENST00000450691.1 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS GCA 72 bp | AGAGGCAGCATCTCGGGCCCCAAACTTCAGGGACGCTaGCCCAAGCCGCGCCTCCTCCCAGCGCCGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: RGSISGPKLQGR*PKPRLLPAPLL Trigger: GAGCAGCGGCGCTGGGAGGAGGCGCGGCTTGGGGCAGCGTCCCTGAAGTTTGGGGCCCGAGATGCTGCCTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000415603.1 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000427297.1 ENST00000436662.1 ENST00000446074.1 ENST00000447945.1 ENST00000448766.1 ENST00000449252.1 ENST00000450691.1 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS CCA 72 bp | GGGCAGCCGCGCTCACTGCTGGGCCGGTCAGAGGCCTaGAGCCCTCGGCTGGAGCCTCAGCTTCGCAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: GQPRSLLGRSEA*SPRLEPQLRKS Trigger: TGACTTGCGAAGCTGAGGCTCCAGCCGAGGGCTCCAGGCCTCTGACCGGCCCAGCAGTGAGCGCGGCTGCCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS GCA 72 bp | GGCGGAAGCACTTCCCTGCAGCCACCCGACCTGCCCTaGCAGCTCGCTGATTGGCTGAGGCCTTGCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GGSTSLQPPDLP*QLADWLRPCCR Trigger: CCTGCAGCAAGGCCTCAGCCAATCAGCGAGCTGGCAGGGCAGGTCGGGTGGCTGCAGGGAAGTGCTTCCGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000458094.6 |
||
| CDS GCA 72 bp | CAGCGCTGTGCGGTACCGATCAGAAACTGGGCGACGTaGCGCTCGCTCAGCCCCAACACCGAGTGCAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: QRCAVPIRNWAT*RSLSPNTECSS Trigger: CGAGCTGCACTCGGTGTTGGGGCTGAGCGAGCGGCACGTCGCCCAGTTTCTGATCGGTACCGCACAGCGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
||
| CDS GCA 72 bp | GCGCTGCACGAACTCCTCGGCAGAGGTGCAGCGCTGTaGGGTACCGATCAGAAACTGGGCGACGTGCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALHELLGRGAAL*GTDQKLGDVPL Trigger: GAGCGGCACGTCGCCCAGTTTCTGATCGGTACCGCACAGCGCTGCACCTCTGCCGAGGAGTTCGTGCAGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
||
| CDS CCA 72 bp | GCAGAGGTGCAGCGCTGTGCGGTACCGATCAGAAACTaGGCGACGTGCCGCTCGCTCAGCCCCAACACCGAG | + |
|
Preference number: 6 (lower is better) Translates to: AEVQRCAVPIRN*ATCRSLSPNTE Trigger: CTCGGTGTTGGGGCTGAGCGAGCGGCACGTCGCCCAGTTTCTGATCGGTACCGCACAGCGCTGCACCTCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
||
| CDS CAA 90 bp | GCTGCCCGGTACTCCCGGGCGAGATCCCGCACTCGCCGCTTATATTaGAGCTCCTGCCGCTCGTGCCGGCTCAGCTCCACGTCCCCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: AARYSRARSRTRRLY*SSCRSCRLSSTSPK Trigger: TTTTGGGGACGTGGAGCTGAGCCGGCACGAGCGGCAGGAGCTCAAATATAAGCGGCGAGTGCGGGATCTCGCCCGGGAGTACCGGGCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000415603.1 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000427297.1 ENST00000436662.1 ENST00000446074.1 ENST00000447945.1 ENST00000448766.1 ENST00000449252.1 ENST00000450691.1 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
||
| CDS TCA 72 bp | ACTCCCGGGCGAGATCCCGCACTCGCCGCTTATATTTaGGCTCCTGCCGCTCGTGCCGGCTCAGCTCCACGT | + |
|
Preference number: 6 (lower is better) Translates to: TPGRDPALAAYI*APAARAGSAPR Trigger: ACGTGGAGCTGAGCCGGCACGAGCGGCAGGAGCTCAAATATAAGCGGCGAGTGCGGGATCTCGCCCGGGAGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000415603.1 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000427297.1 ENST00000436662.1 ENST00000446074.1 ENST00000447945.1 ENST00000448766.1 ENST00000449252.1 ENST00000450691.1 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
||
| CDS CAA 72 bp | TACTCCCGGGCGAGATCCCGCACTCGCCGCTTATATTaGAGCTCCTGCCGCTCGTGCCGGCTCAGCTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: YSRARSRTRRLY*SSCRSCRLSST Trigger: CGTGGAGCTGAGCCGGCACGAGCGGCAGGAGCTCAAATATAAGCGGCGAGTGCGGGATCTCGCCCGGGAGTA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000415603.1 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000427297.1 ENST00000436662.1 ENST00000446074.1 ENST00000447945.1 ENST00000448766.1 ENST00000449252.1 ENST00000450691.1 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
||
| CDS GCA 72 bp | ATAGGCCCAGGCGGTATACAGGCGGAAGCACTTCCCTaGAGCCACCCGACCTGCCCTGCCAGCTCGCTGATT | + |
|
Preference number: 6 (lower is better) Translates to: IGPGGIQAEALP*SHPTCPASSLI Trigger: AATCAGCGAGCTGGCAGGGCAGGTCGGGTGGCTGCAGGGAAGTGCTTCCGCCTGTATACCGCCTGGGCCTAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000458094.6 |
||
| CDS CCA 72 bp | ATGGGAACACCGGGAGGCTGCGGCGGACGGCCTGGATaGACTCTTTCTGCTGGGCCTGAGTTGAAGTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: MGTPGGCGGRPG*TLSAGPELKWV Trigger: CACCCACTTCAACTCAGGCCCAGCAGAAAGAGTCCATCCAGGCCGTCCGCCGCAGCCTCCCGGTGTTCCCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
||
| CDS TCA 72 bp | TCCAGAGTCTCAGGGCGAAGTCCCGGGCCGGCCCACTaGGATCCAAGGTATCAGTGTCTCGTAGGCGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SRVSGRSPGPAH*DPRYQCLVGAA Trigger: TGCAGCGCCTACGAGACACTGATACCTTGGATCTCAGTGGGCCGGCCCGGGACTTCGCCCTGAGACTCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
||
| CDS TCA 72 bp | GTGGGTGGAGCTGACGGCTCCTCATCACCCTGGAGCTaGGTGGCCCGGACAAACTCAATGGTCTCCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VGGADGSSSPWS*VARTNSMVSSS Trigger: GGAGGAGGAGACCATTGAGTTTGTCCGGGCCACTCAGCTCCAGGGTGATGAGGAGCCGTCAGCTCCACCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
||
| CDS GCA 72 bp | TGTCTCGTAGGCGCTGCACGAACTCCTCGGCAGAGGTaGAGCGCTGTGCGGTACCGATCAGAAACTGGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: CLVGAARTPRQR*SAVRYRSETGR Trigger: TCGCCCAGTTTCTGATCGGTACCGCACAGCGCTGCACCTCTGCCGAGGAGTTCGTGCAGCGCCTACGAGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
||
| CDS GCA 72 bp | GCGAGATCCCGCACTCGCCGCTTATATTTGAGCTCCTaGCGCTCGTGCCGGCTCAGCTCCACGTCCCCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: ARSRTRRLYLSS*RSCRLSSTSPK Trigger: TTTTGGGGACGTGGAGCTGAGCCGGCACGAGCGGCAGGAGCTCAAATATAAGCGGCGAGTGCGGGATCTCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000415603.1 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000427297.1 ENST00000436662.1 ENST00000446074.1 ENST00000447945.1 ENST00000448766.1 ENST00000449252.1 ENST00000450691.1 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
||
| CDS CCA 72 bp | TCCCGGATTTTGGAGCCCAGGCGGCGGCAGCGATCCTaGAGCATCTCACAGGCAGCCTCAATCTCCTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SRILEPRRRQRS*SISQAASISSC Trigger: ACAGGAGGAGATTGAGGCTGCCTGTGAGATGCTCCAGGATCGCTGCCGCCGCCTGGGCTCCAAAATCCGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 24 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000450902.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000456005.5 ENST00000458094.6 ENST00000461170.1 ENST00000462469.1 ENST00000477800.1 ENST00000480637.1 ENST00000480966.1 ENST00000481393.1 ENST00000485518.1 ENST00000492529.1 |
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| CDS GCA 72 bp | CGCACTCGCCGCTTATATTTGAGCTCCTGCCGCTCGTaGCGGCTCAGCTCCACGTCCCCAAAAAGGAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: RTRRLYLSSCRS*RLSSTSPKRNS Trigger: GGAGTTCCTTTTTGGGGACGTGGAGCTGAGCCGGCACGAGCGGCAGGAGCTCAAATATAAGCGGCGAGTGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 16 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000415603.1 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000427297.1 ENST00000436662.1 ENST00000446074.1 ENST00000447945.1 ENST00000448766.1 ENST00000449252.1 ENST00000450691.1 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS CCA 72 bp | GATCCACAGCTCGGGCTGGCTGTCCTCGGGTTTCCTTaGGCATGTGGTAGCGATTGGTGGCCTCCAGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: DPQLGLAVLGFP*ACGSDWWPPAS Trigger: AGAAGCTGGAGGCCACCAATCGCTACCACATGCCCAAGGAAACCCGAGGACAGCCAGCCCGAGCTGTGGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000415603.1 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000427297.1 ENST00000436662.1 ENST00000446074.1 ENST00000447945.1 ENST00000448766.1 ENST00000449252.1 ENST00000450691.1 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS CCA 72 bp | GTGGAGCTGACGGCTCCTCATCACCCTGGAGCTGAGTaGCCCGGACAAACTCAATGGTCTCCTCCTCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VELTAPHHPGAE*PGQTQWSPPPP Trigger: TGGAGGAGGAGGAGACCATTGAGTTTGTCCGGGCCACTCAGCTCCAGGGTGATGAGGAGCCGTCAGCTCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS CCA 72 bp | GTGATTTGCAATAGCAGCCAGGAGCTCCTCTCGAAATaGGAACACCGGGAGGCTGCGGCGGACGGCCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: VICNSSQELLSK*EHREAAADGLD Trigger: ATCCAGGCCGTCCGCCGCAGCCTCCCGGTGTTCCCATTTCGAGAGGAGCTCCTGGCTGCTATTGCAAATCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS CCA 72 bp | GCCACAACCACCTTTCGTGCCCCAGGTGGTGTGGGCTaGAAGATACGGGCCTGCATGTCAGAGGGCAGATTG | + |
|
Preference number: 6 (lower is better) Translates to: ATTTFRAPGGVG*KIRACMSEGRL Trigger: CAATCTGCCCTCTGACATGCAGGCCCGTATCTTCCAGCCCACACCACCTGGGGCACGAAAGGTGGTTGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000458094.6 |
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| CDS CCA 72 bp | TCGTTGCCACAACCACCTTTCGTGCCCCAGGTGGTGTaGGCTGGAAGATACGGGCCTGCATGTCAGAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLPQPPFVPQVV*AGRYGPACQRA Trigger: TGCCCTCTGACATGCAGGCCCGTATCTTCCAGCCCACACCACCTGGGGCACGAAAGGTGGTTGTGGCAACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000458094.6 |
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| CDS CAA 90 bp | GCCTGGAGCCCTCGGCTGGAGCCTCAGCTTCGCAAGTCAGCTACCTaGGGACCTCTAGGATCTTCCGACATCCCAAAGCTGTCTTCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: AWSPRLEPQLRKSAT*GPLGSSDIPKLSSR Trigger: ACGGGAAGACAGCTTTGGGATGTCGGAAGATCCTAGAGGTCCCAAGGTAGCTGACTTGCGAAGCTGAGGCTCCAGCCGAGGGCTCCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS TCA 72 bp | ACCCGCTCAGCAAAGGCATCACGCTCCTCCAGGTCCTaGAGGCGTTCACGCTCTGTCCGTTCCCACTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: TRSAKASRSSRS*RRSRSVRSHSS Trigger: AGATGAGTGGGAACGGACAGAGCGTGAACGCCTTCAGGACCTGGAGGAGCGTGATGCCTTTGCTGAGCGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000415603.1 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000427297.1 ENST00000436662.1 ENST00000446074.1 ENST00000447945.1 ENST00000448766.1 ENST00000449252.1 ENST00000450691.1 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS CAA 90 bp | AGCTCTGCCATCTTTCGACCAGACGTGGTGAGCTCCCCAAGGTGGTaGAGGGCTCCCAGAGCATACAGCTGCTCCAAAGCCAGCAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSAIFRPDVVSSPRW*RAPRAYSCSKASSS Trigger: ACTGCTGCTGGCTTTGGAGCAGCTGTATGCTCTGGGAGCCCTCAACCACCTTGGGGAGCTCACCACGTCTGGTCGAAAGATGGCAGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000458094.6 |
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| CDS GCA 72 bp | CTCTCGCTCTGCTGCCCGAGCTGGCTTTTCTACCACTaGCTTTCGTGGTACCTTGTTCCAGAGTCTCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LSLCCPSWLFYH*LSWYLVPESQG Trigger: GCCCTGAGACTCTGGAACAAGGTACCACGAAAGGCAGTGGTAGAAAAGCCAGCTCGGGCAGCAGAGCGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS CCA 72 bp | TACGGGCCTGCATGTCAGAGGGCAGATTGGCATAAATaGGCAGCACCAGGAGCTCCCGGATTTTGGAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: YGPACQRADWHK*AAPGAPGFWSP Trigger: TGGGCTCCAAAATCCGGGAGCTCCTGGTGCTGCCCATTTATGCCAATCTGCCCTCTGACATGCAGGCCCGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 24 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000450902.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000456005.5 ENST00000458094.6 ENST00000461170.1 ENST00000462469.1 ENST00000477800.1 ENST00000480637.1 ENST00000480966.1 ENST00000481393.1 ENST00000485518.1 ENST00000492529.1 |
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| CDS CCA 72 bp | GCCATCTTTCGACCAGACGTGGTGAGCTCCCCAAGGTaGTTGAGGGCTCCCAGAGCATACAGCTGCTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: AIFRPDVVSSPR*LRAPRAYSCSK Trigger: TTTGGAGCAGCTGTATGCTCTGGGAGCCCTCAACCACCTTGGGGAGCTCACCACGTCTGGTCGAAAGATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000458094.6 |
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| CDS CAA 72 bp | CCTCGGCTGGAGCCTCAGCTTCGCAAGTCAGCTACCTaGGGACCTCTAGGATCTTCCGACATCCCAAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PRLEPQLRKSAT*GPLGSSDIPKL Trigger: CAGCTTTGGGATGTCGGAAGATCCTAGAGGTCCCAAGGTAGCTGACTTGCGAAGCTGAGGCTCCAGCCGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS CAA 72 bp | CGGGCAGTGTCCATTGTGGCTGAAGCCACCAGGACCTaGAGCTCAGGTCGGAAGCGAGCAACATCCTTGATC | + |
|
Preference number: 6 (lower is better) Translates to: RAVSIVAEATRT*SSGRKRATSLI Trigger: GATCAAGGATGTTGCTCGCTTCCGACCTGAGCTCAAGGTCCTGGTGGCTTCAGCCACAATGGACACTGCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 24 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000450902.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000456005.5 ENST00000458094.6 ENST00000461170.1 ENST00000462469.1 ENST00000477800.1 ENST00000480637.1 ENST00000480966.1 ENST00000481393.1 ENST00000485518.1 ENST00000492529.1 |
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| CDS CAA 72 bp | ATCTTTCGACCAGACGTGGTGAGCTCCCCAAGGTGGTaGAGGGCTCCCAGAGCATACAGCTGCTCCAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: IFRPDVVSSPRW*RAPRAYSCSKA Trigger: GGCTTTGGAGCAGCTGTATGCTCTGGGAGCCCTCAACCACCTTGGGGAGCTCACCACGTCTGGTCGAAAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000458094.6 |
||
| CDS TCA 72 bp | GCAGAACCAGGTGGTCACCGCCAGGGAGAAAGAAGTTaGCACGGGCATTGTCAGCATGGACGACCTTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: AEPGGHRQGERS*HGHCQHGRPCP Trigger: AGGACAAGGTCGTCCATGCTGACAATGCCCGTGTCAACTTCTTTCTCCCTGGCGGTGACCACCTGGTTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000458094.6 |
||
| CDS GCA 72 bp | TCCCCAAGGTGGTTGAGGGCTCCCAGAGCATACAGCTaGTCCAAAGCCAGCAGCAGTGTCTCATATGGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPRWLRAPRAYS*SKASSSVSYGG Trigger: TCCACCATATGAGACACTGCTGCTGGCTTTGGAGCAGCTGTATGCTCTGGGAGCCCTCAACCACCTTGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000458094.6 |
||
| CDS GCA 72 bp | CTCTCGCTCTGCTGCCCGAGCTGGCTTTTCTACCACTaGCTTTCGTGGTACCTTGGGACCTCTAGGATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LSLCCPSWLFYH*LSWYLGTSRIF Trigger: GAAGATCCTAGAGGTCCCAAGGTACCACGAAAGGCAGTGGTAGAAAAGCCAGCTCGGGCAGCAGAGCGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000415603.1 ENST00000427297.1 ENST00000436662.1 ENST00000446074.1 ENST00000447945.1 ENST00000448766.1 ENST00000449252.1 ENST00000450691.1 |
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| CDS CCA 72 bp | AATGTTCGTTGCCACAACCACCTTTCGTGCCCCAGGTaGTGTGGGCTGGAAGATACGGGCCTGCATGTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: NVRCHNHLSCPR*CGLEDTGLHVR Trigger: TCTGACATGCAGGCCCGTATCTTCCAGCCCACACCACCTGGGGCACGAAAGGTGGTTGTGGCAACGAACATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000458094.6 |
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| CDS CAA 72 bp | AGCAGAACCAGGTGGTCACCGCCAGGGAGAAAGAAGTaGACACGGGCATTGTCAGCATGGACGACCTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SRTRWSPPGRKK*TRALSAWTTLS Trigger: GGACAAGGTCGTCCATGCTGACAATGCCCGTGTCAACTTCTTTCTCCCTGGCGGTGACCACCTGGTTCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000458094.6 |
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| CDS TCA 72 bp | AAAGAAGGTGGAAAAACGGGCAGTGTCCATTGTGGCTaGAGCCACCAGGACCTTGAGCTCAGGTCGGAAGCG | + |
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Preference number: 6 (lower is better) Translates to: KEGGKTGSVHCG*SHQDLELRSEA Trigger: CGCTTCCGACCTGAGCTCAAGGTCCTGGTGGCTTCAGCCACAATGGACACTGCCCGTTTTTCCACCTTCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 24 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000450902.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000456005.5 ENST00000458094.6 ENST00000461170.1 ENST00000462469.1 ENST00000477800.1 ENST00000480637.1 ENST00000480966.1 ENST00000481393.1 ENST00000485518.1 ENST00000492529.1 |
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| CDS GCA 72 bp | TCCACAAAGCAGGCTGGCTCGATGGGCAAAAACATCTaGATCAGACACTCTTGCGCTGGCTGGCTCTCCATG | + |
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Preference number: 6 (lower is better) Translates to: STKQAGSMGKNI*IRHSCAGWLSM Trigger: CATGGAGAGCCAGCCAGCGCAAGAGTGTCTGATGCAGATGTTTTTGCCCATCGAGCCAGCCTGCTTTGTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000376437.9 ENST00000383576.7 ENST00000414052.6 ENST00000445379.6 ENST00000449861.6 ENST00000451748.6 ENST00000453879.2 ENST00000456005.5 |
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| CDS CAA 72 bp | TTGTCTGACCGTTCCAGGACATTTCGAGTCCGATCCTaGTCCCGCTGTCGAACCCGCTCAGCAAAGGCATCA | + |
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Preference number: 6 (lower is better) Translates to: LSDRSRTFRVRS*SRCRTRSAKAS Trigger: TGATGCCTTTGCTGAGCGGGTTCGACAGCGGGACAAGGATCGGACTCGAAATGTCCTGGAACGGTCAGACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000376442.8 ENST00000383577.8 ENST00000415603.1 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000427297.1 ENST00000436662.1 ENST00000446074.1 ENST00000447945.1 ENST00000448766.1 ENST00000449252.1 ENST00000450691.1 ENST00000450902.6 ENST00000451456.6 ENST00000458094.6 |
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| CDS TCA 72 bp | CAGCGTGGCTGTTGCTCAAAGAGGGAGGAGTTGGGATaGATGAAGACTGTCTGCTGCTGTTTCACTGTGCGG | + |
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Preference number: 6 (lower is better) Translates to: QRGCCSKREELG*MKTVCCCFTVR Trigger: CCGCACAGTGAAACAGCAGCAGACAGTCTTCATTCATCCCAACTCCTCCCTCTTTGAGCAACAGCCACGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000458094.6 |
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| CDS CCA 72 bp | GGTGGTCAAGACAAGTTCGTGGTAGAGCAGCCAGCGTaGCTGTTGCTCAAAGAGGGAGGAGTTGGGATGAAT | + |
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Preference number: 6 (lower is better) Translates to: GGQDKFVVEQPA*LLLKEGGVGMN Trigger: ATTCATCCCAACTCCTCCCTCTTTGAGCAACAGCCACGCTGGCTGCTCTACCACGAACTTGTCTTGACCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000458094.6 |
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| CDS CCA 72 bp | AAGTCCCCAGCCATTCCACAAAGCAGGCTGGCTCGATaGGCAAAAACATCTGCATCAGACACTCTTGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: KSPAIPQSRLAR*AKTSASDTLAL Trigger: CAGCGCAAGAGTGTCTGATGCAGATGTTTTTGCCCATCGAGCCAGCCTGCTTTGTGGAATGGCTGGGGACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000376437.9 ENST00000383576.7 ENST00000414052.6 ENST00000445379.6 ENST00000449861.6 ENST00000451748.6 ENST00000453879.2 ENST00000456005.5 |
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| CDS CAA 90 bp | GTGGAAAAACGGGCAGTGTCCATTGTGGCTGAAGCCACCAGGACCTaGAGCTCAGGTCGGAAGCGAGCAACATCCTTGATCAATCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: VEKRAVSIVAEATRT*SSGRKRATSLINPK Trigger: CTTTGGATTGATCAAGGATGTTGCTCGCTTCCGACCTGAGCTCAAGGTCCTGGTGGCTTCAGCCACAATGGACACTGCCCGTTTTTCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 24 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000450902.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000456005.5 ENST00000458094.6 ENST00000461170.1 ENST00000462469.1 ENST00000477800.1 ENST00000480637.1 ENST00000480966.1 ENST00000481393.1 ENST00000485518.1 ENST00000492529.1 |
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| CDS CCA 72 bp | AGGAACACCAGGATATCCCCAGGGGGCTGGGTCACATaGATCTGCAACACAGATACTACACAAGCTTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: RNTRISPGGWVT*ICNTDTTQASK Trigger: CTTGGAAGCTTGTGTAGTATCTGTGTTGCAGATCCATGTGACCCAGCCCCCTGGGGATATCCTGGTGTTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 24 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000450902.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000456005.5 ENST00000458094.6 ENST00000461170.1 ENST00000462469.1 ENST00000477800.1 ENST00000480637.1 ENST00000480966.1 ENST00000481393.1 ENST00000485518.1 ENST00000492529.1 |
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| CDS CAA 72 bp | TCTGAACAGCTGTACTTCTCAGAGGCTAAGATCATTTaGGACAGCATGGGGTCCACCGGCAGCTCTGCCATC | + |
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Preference number: 6 (lower is better) Translates to: SEQLYFSEAKII*DSMGSTGSSAI Trigger: GATGGCAGAGCTGCCGGTGGACCCCATGCTGTCCAAAATGATCTTAGCCTCTGAGAAGTACAGCTGTTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000458094.6 |
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| CDS CAA 72 bp | TGGCTCGATGGGCAAAAACATCTGCATCAGACACTCTaGCGCTGGCTGGCTCTCCATGGGTTCTTAGAGATC | + |
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Preference number: 6 (lower is better) Translates to: WLDGQKHLHQTL*RWLALHGFLEI Trigger: GATCTCTAAGAACCCATGGAGAGCCAGCCAGCGCAAGAGTGTCTGATGCAGATGTTTTTGCCCATCGAGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000376437.9 ENST00000383576.7 ENST00000414052.6 ENST00000445379.6 ENST00000449861.6 ENST00000451748.6 ENST00000453879.2 ENST00000456005.5 |
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| CDS CAA 90 bp | AGGATCTCCTCTGAACAGCTGTACTTCTCAGAGGCTAAGATCATTTaGGACAGCATGGGGTCCACCGGCAGCTCTGCCATCTTTCGACCA | + |
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Preference number: 6 (lower is better) Translates to: RISSEQLYFSEAKII*DSMGSTGSSAIFRP Trigger: TGGTCGAAAGATGGCAGAGCTGCCGGTGGACCCCATGCTGTCCAAAATGATCTTAGCCTCTGAGAAGTACAGCTGTTCAGAGGAGATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000458094.6 |
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| CDS CAA 90 bp | AAAGCAGGCTGGCTCGATGGGCAAAAACATCTGCATCAGACACTCTaGCGCTGGCTGGCTCTCCATGGGTTCTTAGAGATCTTTTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: KAGWLDGQKHLHQTL*RWLALHGFLEIFCK Trigger: CTTGCAAAAGATCTCTAAGAACCCATGGAGAGCCAGCCAGCGCAAGAGTGTCTGATGCAGATGTTTTTGCCCATCGAGCCAGCCTGCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000376437.9 ENST00000383576.7 ENST00000414052.6 ENST00000445379.6 ENST00000449861.6 ENST00000451748.6 ENST00000453879.2 ENST00000456005.5 |
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| CDS CCA 72 bp | GACACGGGCATTGTCAGCATGGACGACCTTGTCCTTTaGTCGGTAGAAGATGGAGTTGTTGACAGAGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: DTGIVSMDDLVL*SVEDGVVDREH Trigger: ATGCTCTCTGTCAACAACTCCATCTTCTACCGACCAAAGGACAAGGTCGTCCATGCTGACAATGCCCGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000458094.6 |
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| CDS CCA 72 bp | GATGGGCAAAAACATCTGCATCAGACACTCTTGCGCTaGCTGGCTCTCCATGGGTTCTTAGAGATCTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: DGQKHLHQTLLR*LALHGFLEIFC Trigger: GCAAAAGATCTCTAAGAACCCATGGAGAGCCAGCCAGCGCAAGAGTGTCTGATGCAGATGTTTTTGCCCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000376437.9 ENST00000383576.7 ENST00000414052.6 ENST00000445379.6 ENST00000449861.6 ENST00000451748.6 ENST00000453879.2 ENST00000456005.5 |
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| CDS GCA 72 bp | AGTGTCTCATATGGTGGAGGGTCCAGGAAATCAAAGTaGATTAGGTCATGGATCCCTAAGCTCTTGAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SVSYGGGSRKSK*IRSWIPKLLSS Trigger: GCTGCTCAAGAGCTTAGGGATCCATGACCTAATGCACTTTGATTTCCTGGACCCTCCACCATATGAGACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000376437.9 ENST00000376442.8 ENST00000383576.7 ENST00000383577.8 ENST00000414052.6 ENST00000417308.6 ENST00000421095.6 ENST00000424672.6 ENST00000445379.6 ENST00000449861.6 ENST00000451456.6 ENST00000451748.6 ENST00000453879.2 ENST00000458094.6 |
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