Pregenerated sensors for DHRS4 (Homo sapiens)
Ensembl gene IDs: ENSG00000157326Ensembl transcript IDs: ENST00000543741.6, ENST00000643517.1
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | GTCAAGTCCTACCTTGGACCAATTAAAAAGAATCTCTaGGAGTGGGTGGGGCCTGAGCACCTGCAGTTTAAA | + |
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Preference number: 3 (lower is better) Translates to: VKSYLGPIKKNL*EWVGPEHLQFK Trigger: TTTAAACTGCAGGTGCTCAGGCCCCACCCACTCCCAGAGATTCTTTTTAATTGGTCCAAGGTAGGACTTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000543741.6 ENST00000643517.1 |
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| CDS-3UTR CCA 90 bp | TCAAGTCCTACCTTGGACCAATTAAAAAGAATCTCTGGGAGTGGGTGGGGCCTGGAAGCTTCACAGCCGTaGCCACCAGCCGCTCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSPTLDQLKRISGSGWGLEASQP*PPAAPG Trigger: ACCGGGAGCGGCTGGTGGCCACGGCTGTGAAGCTTC...CAGGCCCCACCCACTCCCAGAGATTCTTTTTAATTGGTCCAAGGTAGGACTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000543741.6 ENST00000643517.1 |
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| CDS-3UTR CCA 90 bp | CAATTAAAAAGAATCTCTGGGAGTGGGTGGGGCCTGAGCACCTGCAGTTTAAAAGAAGCTTCACAGCCGTaGCCACCAGCCGCTCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: QLKRISGSGWGLSTCSLKEASQP*PPAAPG Trigger: ACCGGGAGCGGCTGGTGGCCACGGCTGTGAAGCTTC...TTTTAAACTGCAGGTGCTCAGGCCCCACCCACTCCCAGAGATTCTTTTTAATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000543741.6 ENST00000643517.1 |
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| CDS-3UTR CCA 90 bp | TCAAGTCCTACCTTGGACCAATTAAAAAGAATCTCTGGGAGTGGGTGGGGCCTGATCTCTGGGAGTGGGTaGGGCCTGAGCACCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSPTLDQLKRISGSGWGLISGSG*GLSTCS Trigger: ACTGCAGGTGCTCAGGCCCCACCCACTCCCAGAGAT...CAGGCCCCACCCACTCCCAGAGATTCTTTTTAATTGGTCCAAGGTAGGACTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000543741.6 ENST00000643517.1 |
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| CDS-3UTR CCA 90 bp | TCAAGTCCTACCTTGGACCAATTAAAAAGAATCTCTGGGAGTGGGTGGGGCCTGAAGAATCTCTGGGAGTaGGTGGGGCCTGAGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSPTLDQLKRISGSGWGLKNLWE*VGPEHL Trigger: CAGGTGCTCAGGCCCCACCCACTCCCAGAGATTCTT...CAGGCCCCACCCACTCCCAGAGATTCTTTTTAATTGGTCCAAGGTAGGACTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000543741.6 ENST00000643517.1 |
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| CDS-3UTR CCA 90 bp | CAATTAAAAAGAATCTCTGGGAGTGGGTGGGGCCTGAGCACCTGCAGTTTAAAAAAGAATCTCTGGGAGTaGGTGGGGCCTGAGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: QLKRISGSGWGLSTCSLKKNLWE*VGPEHL Trigger: CAGGTGCTCAGGCCCCACCCACTCCCAGAGATTCTT...TTTTAAACTGCAGGTGCTCAGGCCCCACCCACTCCCAGAGATTCTTTTTAATTG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENST00000543741.6 ENST00000643517.1 |
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| CDS-3UTR CCA 90 bp | TCAAGTCCTACCTTGGACCAATTAAAAAGAATCTCTGGGAGTGGGTGGGGCCTGATTAAAAAGAATCTCTaGGAGTGGGTGGGGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSPTLDQLKRISGSGWGLIKKNL*EWVGPE Trigger: CTCAGGCCCCACCCACTCCCAGAGATTCTTTTTAAT...CAGGCCCCACCCACTCCCAGAGATTCTTTTTAATTGGTCCAAGGTAGGACTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000543741.6 ENST00000643517.1 |
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| CDS-3UTR CAA 90 bp | TCAAGTCCTACCTTGGACCAATTAAAAAGAATCTCTGGGAGTGGGTGGGGCCTGTTGTCCATCCAGAGCTaGTCCCACACCTCCTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSPTLDQLKRISGSGWGLLSIQS*SHTSSV Trigger: CACTGAGGAGGTGTGGGACAAGCTCTGGATGGACAA...CAGGCCCCACCCACTCCCAGAGATTCTTTTTAATTGGTCCAAGGTAGGACTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000543741.6 ENST00000643517.1 |
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| CDS-3UTR CAA 90 bp | CAATTAAAAAGAATCTCTGGGAGTGGGTGGGGCCTGAGCACCTGCAGTTTAAAATTGTCCATCCAGAGCTaGTCCCACACCTCCTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QLKRISGSGWGLSTCSLKLSIQS*SHTSSV Trigger: CACTGAGGAGGTGTGGGACAAGCTCTGGATGGACAA...TTTTAAACTGCAGGTGCTCAGGCCCCACCCACTCCCAGAGATTCTTTTTAATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000543741.6 ENST00000643517.1 |
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| CDS-3UTR CAA 90 bp | TCAAGTCCTACCTTGGACCAATTAAAAAGAATCTCTGGGAGTGGGTGGGGCCTGTGGTCAAGTCCTACCTaGGACCAATTAAAAAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: SSPTLDQLKRISGSGWGLWSSPT*DQLKRI Trigger: GATTCTTTTTAATTGGTCCAAGGTAGGACTTGACCA...CAGGCCCCACCCACTCCCAGAGATTCTTTTTAATTGGTCCAAGGTAGGACTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000543741.6 ENST00000643517.1 |
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| CDS-3UTR CAA 90 bp | CAATTAAAAAGAATCTCTGGGAGTGGGTGGGGCCTGAGCACCTGCAGTTTAAAATGGTCAAGTCCTACCTaGGACCAATTAAAAAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: QLKRISGSGWGLSTCSLKWSSPT*DQLKRI Trigger: GATTCTTTTTAATTGGTCCAAGGTAGGACTTGACCA...TTTTAAACTGCAGGTGCTCAGGCCCCACCCACTCCCAGAGATTCTTTTTAATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000543741.6 ENST00000643517.1 |
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