RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DHRS13 (Homo sapiens)

Ensembl gene IDs: ENSG00000167536

Ensembl transcript IDs: ENST00000378895.9, ENST00000394901.7, ENST00000426464.2, ENST00000581759.1, ENST00000581974.1

Found 251 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCGGAAGGCGTCCCCTTACTCCCATGGGGCACCTCGATACCAGCTaGCCTGCCCTGACTCACTTCTCAGCACCCATCTTACGGCAGTCG +
Preference number: 1 (lower is better)
Translates to: PGRRPLTPMGHLDTS*PALTHFSAPILRQS
Trigger: CGACTGCCGTAAGATGGGTGCTGAGAAGTGAGTCAGGGCAGGGCAGCTGGTATCGAGGTGCCCCATGGGAGTAAGGGGACGCCTTCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR CCA 90 bp TTCTCAGCACCCATCTTACGGCAGTCGGCCCTGGCCTCAGACCCTTaGGTTCAGATCCCAGGCCCTCCTCCTACTCACTGTGAGACCCTA +
Preference number: 1 (lower is better)
Translates to: FSAPILRQSALASDP*VQIPGPPPTHCETL
Trigger: TAGGGTCTCACAGTGAGTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGACTGCCGTAAGATGGGTGCTGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR CCA 90 bp GTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATaGCCTCGCACACATCCGAGGTTTTCAAGGACCATGAAGTGCCAT +
Preference number: 1 (lower is better)
Translates to: VTTEVKITNPSVSRA*PRTHPRFSRTMKCH
Trigger: ATGGCACTTCATGGTCCTTGAAAACCTCGGATGTGTGCGAGGCCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR GCA 90 bp AGACGGTTGCAAAGGGATCAGTTCACTAATTCTCAATGTTGGCAGTaGATCACATTGCAAACTCCCTGCCTCTGCTCCAGAGCTGATCAG +
Preference number: 1 (lower is better)
Translates to: RRLQRDQFTNSQCWQ*ITLQTPCLCSRADQ
Trigger: CTGATCAGCTCTGGAGCAGAGGCAGGGAGTTTGCAATGTGATGCACTGCCAACATTGAGAATTAGTGAACTGATCCCTTTGCAACCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR TCA 90 bp TTGGCAGTGCATCACATTGCAAACTCCCTGCCTCTGCTCCAGAGCTaGTCAGAATCAATAAGGGTGGGGCCTGAAAATACTACATCCAAA +
Preference number: 1 (lower is better)
Translates to: LAVHHIANSLPLLQS*SESIRVGPENTTSK
Trigger: TTTGGATGTAGTATTTTCAGGCCCCACCCTTATTGATTCTGATCAGCTCTGGAGCAGAGGCAGGGAGTTTGCAATGTGATGCACTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR CCA 90 bp AATTTCCGAGAAGCACAGTGTCTAGCATACCCCTATCTCTCCATCTaGGGTTACTGTCACTCTCAGGAAGAAATAATCACCCATTATTCC +
Preference number: 1 (lower is better)
Translates to: NFREAQCLAYPYLSI*GYCHSQEEIITHYS
Trigger: GGAATAATGGGTGATTATTTCTTCCTGAGAGTGACAGTAACCCCAGATGGAGAGATAGGGGTATGCTAGACACTGTGCTTCTCGGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR-3UTR CCA 90 bp CGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTACTCACTTCAGTGTCCAGGGCATaGCCTCGCACACATCCGAGG +
Preference number: 2 (lower is better)
Translates to: RPWPQTLGFRSQALLLLTSVSRA*PRTHPR
Trigger: CCTCGGATGTGTGCGAGGCCATGCCCTGGACACTGA...AGTGAGTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR-3UTR CCA 90 bp CTGCCCTGCCCTGACTCACTTCTCAGCACCCATCTTACGGCAGTCGGCCCTGGCTCAGTGTCCAGGGCATaGCCTCGCACACATCCGAGG +
Preference number: 2 (lower is better)
Translates to: LPCPDSLLSTHLTAVGPGSVSRA*PRTHPR
Trigger: CCTCGGATGTGTGCGAGGCCATGCCCTGGACACTGA...GCCAGGGCCGACTGCCGTAAGATGGGTGCTGAGAAGTGAGTCAGGGCAGGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR-3UTR CCA 90 bp CGGCAGTCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTCCCTATCTCTCCATCTaGGGTTACTGTCACTCTCAG +
Preference number: 2 (lower is better)
Translates to: RQSALASDPWVQIPGPPPPYLSI*GYCHSQ
Trigger: CTGAGAGTGACAGTAACCCCAGATGGAGAGATAGGG...AGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGACTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR-3UTR CCA 90 bp CAGATGACCCCAGCCCTGCATCCGCCCGGAAGGCGTCCCCTTACTCCCATGGGGCCCTATCTCTCCATCTaGGGTTACTGTCACTCTCAG +
Preference number: 2 (lower is better)
Translates to: QMTPALHPPGRRPLTPMGPYLSI*GYCHSQ
Trigger: CTGAGAGTGACAGTAACCCCAGATGGAGAGATAGGG...CCCCATGGGAGTAAGGGGACGCCTTCCGGGCGGATGCAGGGCTGGGGTCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR-3UTR GCA 90 bp CGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTACTCACTTCAAGGACCATGAAGTaGCATGGCAAGCATCCTGGC +
Preference number: 2 (lower is better)
Translates to: RPWPQTLGFRSQALLLLTSRTMK*HGKHPG
Trigger: GCCAGGATGCTTGCCATGGCACTTCATGGTCCTTGA...AGTGAGTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR-3UTR GCA 90 bp CAGTCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTACTTCAAGGACCATGAAGTaGCATGGCAAGCATCCTGGC +
Preference number: 2 (lower is better)
Translates to: QSALASDPWVQIPGPPPTSRTMK*HGKHPG
Trigger: GCCAGGATGCTTGCCATGGCACTTCATGGTCCTTGA...AGTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR-3UTR GCA 90 bp CGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTACTCACTGGCAGTGCATCACATTaGAAACTCCCTGCCTCTGCT +
Preference number: 2 (lower is better)
Translates to: RPWPQTLGFRSQALLLLTGSASH*KLPASA
Trigger: AGCAGAGGCAGGGAGTTTGCAATGTGATGCACTGCC...AGTGAGTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR-3UTR GCA 90 bp TGCCCTGACTCACTTCTCAGCACCCATCTTACGGCAGTCGGCCCTGGCCTCAGAACATTGCAAACTCCCTaGCTCTGCTCCAGAGCTGAT +
Preference number: 2 (lower is better)
Translates to: CPDSLLSTHLTAVGPGLRTLQTP*LCSRAD
Trigger: ATCAGCTCTGGAGCAGAGGCAGGGAGTTTGCAATGT...TCTGAGGCCAGGGCCGACTGCCGTAAGATGGGTGCTGAGAAGTGAGTCAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR-3UTR GCA 90 bp TCTTACGGCAGTCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCTCTCAATGTTGGCAGTaGATCACATTGCAAACTCCC +
Preference number: 2 (lower is better)
Translates to: SYGSRPWPQTLGFRSQALSQCWQ*ITLQTP
Trigger: GGGAGTTTGCAATGTGATGCACTGCCAACATTGAGA...GAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGACTGCCGTAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR-3UTR GCA 90 bp GGTCAACGCGCTTTATTCCGAGGGGCTTCAGATACAGATGACCCCAGCCCTGCATCAAGGACCATGAAGTaGCATGGCAAGCATCCTGGC +
Preference number: 2 (lower is better)
Translates to: GQRALFRGASDTDDPSPASRTMK*HGKHPG
Trigger: GCCAGGATGCTTGCCATGGCACTTCATGGTCCTTGA...TGCAGGGCTGGGGTCATCTGTATCTGAAGCCCCTCGGAATAAAGCGCGTTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR-3UTR CCA 90 bp CCGAGAAGCACAGTGTCTAGCATACCCCTATCTCTCCATCTGGGGTTACTGTCATCAGTGTCCAGGGCATaGCCTCGCACACATCCGAGG +
Preference number: 2 (lower is better)
Translates to: PRSTVSSIPLSLHLGLLSSVSRA*PRTHPR
Trigger: CCTCGGATGTGTGCGAGGCCATGCCCTGGACACTGA...TGACAGTAACCCCAGATGGAGAGATAGGGGTATGCTAGACACTGTGCTTCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR-3UTR TCA 90 bp GCCCTGACTCACTTCTCAGCACCCATCTTACGGCAGTCGGCCCTGGCCTCAGACAATAAGGGTGGGGCCTaGAAATACTACATCCAAATT +
Preference number: 2 (lower is better)
Translates to: ALTHFSAPILRQSALASDNKGGA*KYYIQI
Trigger: AATTTGGATGTAGTATTTTCAGGCCCCACCCTTATT...GTCTGAGGCCAGGGCCGACTGCCGTAAGATGGGTGCTGAGAAGTGAGTCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR-3UTR GCA 90 bp GGTCAACGCGCTTTATTCCGAGGGGCTTCAGATACAGATGACCCCAGCCCTGCATCTCAATGTTGGCAGTaGATCACATTGCAAACTCCC +
Preference number: 2 (lower is better)
Translates to: GQRALFRGASDTDDPSPASQCWQ*ITLQTP
Trigger: GGGAGTTTGCAATGTGATGCACTGCCAACATTGAGA...TGCAGGGCTGGGGTCATCTGTATCTGAAGCCCCTCGGAATAAAGCGCGTTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR-3UTR CAA 90 bp TCTTACGGCAGTCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCTGTCCAGGGCACAGCTaGGGGCCCCAGAAAGTAACC +
Preference number: 3 (lower is better)
Translates to: SYGSRPWPQTLGFRSQALCPGHS*GPQKVT
Trigger: GGTTACTTTCTGGGGCCCCAAGCTGTGCCCTGGACA...GAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGACTGCCGTAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR TCA 72 bp CTCCCATGGGGCACCTCGATACCAGCTGCCCTGCCCTaGCTCACTTCTCAGCACCCATCTTACGGCAGTCGG +
Preference number: 3 (lower is better)
Translates to: LPWGTSIPAALP*LTSQHPSYGSR
Trigger: CCGACTGCCGTAAGATGGGTGCTGAGAAGTGAGTCAGGGCAGGGCAGCTGGTATCGAGGTGCCCCATGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR TCA 72 bp TCAACGCGCTTTATTCCGAGGGGCTTCAGATACAGATaGCCCCAGCCCTGCATCCGCCCGGAAGGCGTCCCC +
Preference number: 3 (lower is better)
Translates to: STRFIPRGFRYR*PQPCIRPEGVP
Trigger: GGGGACGCCTTCCGGGCGGATGCAGGGCTGGGGTCATCTGTATCTGAAGCCCCTCGGAATAAAGCGCGTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR CCA 72 bp CCCATCTTACGGCAGTCGGCCCTGGCCTCAGACCCTTaGGTTCAGATCCCAGGCCCTCCTCCTACTCACTGT +
Preference number: 3 (lower is better)
Translates to: PILRQSALASDP*VQIPGPPPTHC
Trigger: ACAGTGAGTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGACTGCCGTAAGATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR CCA 72 bp CTCACTTCTCAGCACCCATCTTACGGCAGTCGGCCCTaGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTC +
Preference number: 3 (lower is better)
Translates to: LTSQHPSYGSRP*PQTLGFRSQAL
Trigger: GAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGACTGCCGTAAGATGGGTGCTGAGAAGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR-3UTR CAA 90 bp CTGCCCTGCCCTGACTCACTTCTCAGCACCCATCTTACGGCAGTCGGCCCTGGCTGGCAGTGCATCACATaGCAAACTCCCTGCCTCTGC +
Preference number: 3 (lower is better)
Translates to: LPCPDSLLSTHLTAVGPGWQCIT*QTPCLC
Trigger: GCAGAGGCAGGGAGTTTGCAATGTGATGCACTGCCA...GCCAGGGCCGACTGCCGTAAGATGGGTGCTGAGAAGTGAGTCAGGGCAGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR-3UTR CAA 90 bp CCGAGAAGCACAGTGTCTAGCATACCCCTATCTCTCCATCTGGGGTTACTGTCATGTCCAGGGCACAGCTaGGGGCCCCAGAAAGTAACC +
Preference number: 3 (lower is better)
Translates to: PRSTVSSIPLSLHLGLLSCPGHS*GPQKVT
Trigger: GGTTACTTTCTGGGGCCCCAAGCTGTGCCCTGGACA...TGACAGTAACCCCAGATGGAGAGATAGGGGTATGCTAGACACTGTGCTTCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR CCA 72 bp GAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATaGCCTCGCACACATCCGAGGTTTTCAAGGACCATG +
Preference number: 3 (lower is better)
Translates to: EVKITNPSVSRA*PRTHPRFSRTM
Trigger: CATGGTCCTTGAAAACCTCGGATGTGTGCGAGGCCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR-3UTR CAA 90 bp CTACATCCAAATTTCCGAGAAGCACAGTGTCTAGCATACCCCTATCTCTCCATCTGTCCAGGGCACAGCTaGGGGCCCCAGAAAGTAACC +
Preference number: 3 (lower is better)
Translates to: LHPNFREAQCLAYPYLSICPGHS*GPQKVT
Trigger: GGTTACTTTCTGGGGCCCCAAGCTGTGCCCTGGACA...GATGGAGAGATAGGGGTATGCTAGACACTGTGCTTCTCGGAAATTTGGATGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR TCA 72 bp CATCACATTGCAAACTCCCTGCCTCTGCTCCAGAGCTaGTCAGAATCAATAAGGGTGGGGCCTGAAAATACT +
Preference number: 3 (lower is better)
Translates to: HHIANSLPLLQS*SESIRVGPENT
Trigger: AGTATTTTCAGGCCCCACCCTTATTGATTCTGATCAGCTCTGGAGCAGAGGCAGGGAGTTTGCAATGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR GCA 72 bp CAAAGGGATCAGTTCACTAATTCTCAATGTTGGCAGTaGATCACATTGCAAACTCCCTGCCTCTGCTCCAGA +
Preference number: 3 (lower is better)
Translates to: QRDQFTNSQCWQ*ITLQTPCLCSR
Trigger: TCTGGAGCAGAGGCAGGGAGTTTGCAATGTGATGCACTGCCAACATTGAGAATTAGTGAACTGATCCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
3UTR TCA 72 bp GCTCCAGAGCTGATCAGAATCAATAAGGGTGGGGCCTaGAAATACTACATCCAAATTTCCGAGAAGCACAGT +
Preference number: 3 (lower is better)
Translates to: APELIRINKGGA*KYYIQISEKHS
Trigger: ACTGTGCTTCTCGGAAATTTGGATGTAGTATTTTCAGGCCCCACCCTTATTGATTCTGATCAGCTCTGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp CGGCAGTCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTGGAGCCGAGCTGAGCTaGGCCCGGCGGGCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: RQSALASDPWVQIPGPPPGAELS*ARRAAA
Trigger: AGCAGCGGCCCGCCGGGCTCAGCTCAGCTCGGCTCC...AGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGACTGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394901.7
CDS-3UTR GCA 90 bp AGCCCTGCATCCGCCCGGAAGGCGTCCCCTTACTCCCATGGGGCACCTCGATACTCGCCGCCAGGCGGCTaGCGATCCGCCCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: SPASARKASPYSHGAPRYSPPGG*RSALHR
Trigger: CCTGTGCAGGGCGGATCGGCAGCCGCCTGGCGGCGA...GTATCGAGGTGCCCCATGGGAGTAAGGGGACGCCTTCCGGGCGGATGCAGGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378895.9
ENST00000394901.7
CDS-3UTR GCA 90 bp CAGATGACCCCAGCCCTGCATCCGCCCGGAAGGCGTCCCCTTACTCCCATGGGGGGCACCCCCTCTTGGTaGCCGGAGCACCAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: QMTPALHPPGRRPLTPMGGTPSW*PEHQPS
Trigger: GCTTGGCTGGTGCTCCGGGCACCAAGAGGGGGTGCC...CCCCATGGGAGTAAGGGGACGCCTTCCGGGCGGATGCAGGGCTGGGGTCATCTG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp TCTTACGGCAGTCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCGCTGCCGATCCGCCCTaGACAGGCCTGGAACGGCGC +
Preference number: 4 (lower is better)
Translates to: SYGSRPWPQTLGFRSQALAADPP*TGLERR
Trigger: GCGCCGTTCCAGGCCTGTGCAGGGCGGATCGGCAGC...GAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGACTGCCGTAAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378895.9
ENST00000394901.7
CDS-3UTR GCA 90 bp GCAGTCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTACCCCAGGCCCAAGCCCTaGCAGCCTCTTGCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: AVGPGLRPLGSDPRPSSYPRPKP*QPLAGL
Trigger: GAGGCCAGCAAGAGGCTGGCAGGGCTTGGGCCTGGG...GTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGACTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp AGCCCTGCATCCGCCCGGAAGGCGTCCCCTTACTCCCATGGGGCACCTCGATACCCCAGGCCCAAGCCCTaGCAGCCTCTTGCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SPASARKASPYSHGAPRYPRPKP*QPLAGL
Trigger: GAGGCCAGCAAGAGGCTGGCAGGGCTTGGGCCTGGG...GTATCGAGGTGCCCCATGGGAGTAAGGGGACGCCTTCCGGGCGGATGCAGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp GCAGTCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTACGCCTCCCATAGCCGATaGGCTGCCCGGTCGTCTCGG +
Preference number: 4 (lower is better)
Translates to: AVGPGLRPLGSDPRPSSYASHSR*AARSSR
Trigger: CCGAGACGACCGGGCAGCCCATCGGCTATGGGAGGC...GTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGACTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp CGGCAGTCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTAGAAGATGGGGCCTCTaGGTCCTCAGACTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: RQSALASDPWVQIPGPPPRRWGL*VLRLGV
Trigger: GACCCCCAGTCTGAGGACTCAGAGGCCCCATCTTCT...AGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGACTGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp GCAGTCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTACAGGCCCTGGGTGGGCTaGATAGCAGGTGACGCCAGT +
Preference number: 4 (lower is better)
Translates to: AVGPGLRPLGSDPRPSSYRPWVG*IAGDAS
Trigger: ACTGGCGTCACCTGCTATGCAGCCCACCCAGGGCCT...GTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGACTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp CGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTACTCACTCCGCCAGCCCACCACTaGGCGGTCCAGGCGTTTGAA +
Preference number: 4 (lower is better)
Translates to: RPWPQTLGFRSQALLLLTPPAHH*AVQAFE
Trigger: TTCAAACGCCTGGACCGCCCAGTGGTGGGCTGGCGG...AGTGAGTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp TCTTACGGCAGTCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCCAGTGGCCTCAAGCTaGTTGGCGAGCTCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: SYGSRPWPQTLGFRSQALPVASS*LASSRA
Trigger: TGCCCGGGAGCTCGCCAACCAGCTTGAGGCCACTGG...GAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGACTGCCGTAAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp GCCCTGACTCACTTCTCAGCACCCATCTTACGGCAGTCGGCCCTGGCCTCAGACCTGGGCACCCCCTCTTaGTGCCCGGAGCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: ALTHFSAPILRQSALASDLGTPS*CPEHQP
Trigger: TGGCTGGTGCTCCGGGCACCAAGAGGGGGTGCCCAG...GTCTGAGGCCAGGGCCGACTGCCGTAAGATGGGTGCTGAGAAGTGAGTCAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp CAGATGACCCCAGCCCTGCATCCGCCCGGAAGGCGTCCCCTTACTCCCATGGGGCAATACAGGGGTGTCTaGGCACCCCCTCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: QMTPALHPPGRRPLTPMGQYRGV*APPLGA
Trigger: GGCACCAAGAGGGGGTGCCCAGACACCCCTGTATTG...CCCCATGGGAGTAAGGGGACGCCTTCCGGGCGGATGCAGGGCTGGGGTCATCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp CGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTACTCACTGGCGGTCCAGGCGTTTaGAGTCAAGACGTCCCCGAC +
Preference number: 4 (lower is better)
Translates to: RPWPQTLGFRSQALLLLTGGPGV*SQDVPD
Trigger: GTCGGGGACGTCTTGACTTCAAACGCCTGGACCGCC...AGTGAGTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp CTGCCCTGCCCTGACTCACTTCTCAGCACCCATCTTACGGCAGTCGGCCCTGGCGGCGGTCCAGGCGTTTaGAGTCAAGACGTCCCCGAC +
Preference number: 4 (lower is better)
Translates to: LPCPDSLLSTHLTAVGPGGGPGV*SQDVPD
Trigger: GTCGGGGACGTCTTGACTTCAAACGCCTGGACCGCC...GCCAGGGCCGACTGCCGTAAGATGGGTGCTGAGAAGTGAGTCAGGGCAGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp CTGCCCTGCCCTGACTCACTTCTCAGCACCCATCTTACGGCAGTCGGCCCTGGCGCGGCTAGGGGCACATaGCTTCAGGCAAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LPCPDSLLSTHLTAVGPGAARGT*LQARQQ
Trigger: CTGCTGCCTTGCCTGAAGGCATGTGCCCCTAGCCGC...GCCAGGGCCGACTGCCGTAAGATGGGTGCTGAGAAGTGAGTCAGGGCAGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp CGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTACTCACTAGACGTCCCCGACAGTaGGCAGCTGAGGCTACCACC +
Preference number: 4 (lower is better)
Translates to: RPWPQTLGFRSQALLLLTRRPRQ*AAEATT
Trigger: GGTGGTAGCCTCAGCTGCCCACTGTCGGGGACGTCT...AGTGAGTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp TGCCCTGACTCACTTCTCAGCACCCATCTTACGGCAGTCGGCCCTGGCCTCAGAGCCTCCCATAGCCGATaGGCTGCCCGGTCGTCTCGG +
Preference number: 4 (lower is better)
Translates to: CPDSLLSTHLTAVGPGLRASHSR*AARSSR
Trigger: CCGAGACGACCGGGCAGCCCATCGGCTATGGGAGGC...TCTGAGGCCAGGGCCGACTGCCGTAAGATGGGTGCTGAGAAGTGAGTCAGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp GCCCTGACTCACTTCTCAGCACCCATCTTACGGCAGTCGGCCCTGGCCTCAGACGGGCTGCATAGCAGGTaGCGCCAGTGGCCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: ALTHFSAPILRQSALASDGLHSR*RQWPQA
Trigger: AGCTTGAGGCCACTGGCGTCACCTGCTATGCAGCCC...GTCTGAGGCCAGGGCCGACTGCCGTAAGATGGGTGCTGAGAAGTGAGTCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp CTGCCCTGCCCTGACTCACTTCTCAGCACCCATCTTACGGCAGTCGGCCCTGGCAGAAGATGGGGCCTCTaGGTCCTCAGACTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: LPCPDSLLSTHLTAVGPGRRWGL*VLRLGV
Trigger: GACCCCCAGTCTGAGGACTCAGAGGCCCCATCTTCT...GCCAGGGCCGACTGCCGTAAGATGGGTGCTGAGAAGTGAGTCAGGGCAGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp TCTTACGGCAGTCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCAGAAGATGGGGCCTCTaGGTCCTCAGACTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: SYGSRPWPQTLGFRSQALRRWGL*VLRLGV
Trigger: GACCCCCAGTCTGAGGACTCAGAGGCCCCATCTTCT...GAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGACTGCCGTAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp GCCCTGACTCACTTCTCAGCACCCATCTTACGGCAGTCGGCCCTGGCCTCAGACCCAGCTGCCCTGCCCTaGCTCACTTCTCAGCACCCA +
Preference number: 4 (lower is better)
Translates to: ALTHFSAPILRQSALASDPAALP*LTSQHP
Trigger: TGGGTGCTGAGAAGTGAGTCAGGGCAGGGCAGCTGG...GTCTGAGGCCAGGGCCGACTGCCGTAAGATGGGTGCTGAGAAGTGAGTCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp CAGTCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTACTGGCTTCAGATACAGATaGCCCCAGCCCTGCATCCGC +
Preference number: 4 (lower is better)
Translates to: QSALASDPWVQIPGPPPTGFRYR*PQPCIR
Trigger: GCGGATGCAGGGCTGGGGTCATCTGTATCTGAAGCC...AGTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp GTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGCCTCGCTATGCCCGCAGCTCCTaGCGCCAGCCCACCACTGGG +
Preference number: 4 (lower is better)
Translates to: VTTEVKITNPSVSRAWPRYARSS*RQPTTG
Trigger: CCCAGTGGTGGGCTGGCGGCAGGAGCTGCGGGCATA...GCGAGGCCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp AGCCCTGCATCCGCCCGGAAGGCGTCCCCTTACTCCCATGGGGCACCTCGATACCTTAGTGTCAGCATATaGCCGCAGCTCCTGCCGCCA +
Preference number: 4 (lower is better)
Translates to: SPASARKASPYSHGAPRYLSVSI*PQLLPP
Trigger: TGGCGGCAGGAGCTGCGGGCATATGCTGACACTAAG...GTATCGAGGTGCCCCATGGGAGTAAGGGGACGCCTTCCGGGCGGATGCAGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp GTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGCCTCGCGGCACCCCCTCTTGGTaGCCGGAGCACCAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: VTTEVKITNPSVSRAWPRGTPSW*PEHQPS
Trigger: GCTTGGCTGGTGCTCCGGGCACCAAGAGGGGGTGCC...GCGAGGCCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp CTGCCCTGCCCTGACTCACTTCTCAGCACCCATCTTACGGCAGTCGGCCCTGGCTTGTTCCCACTCTCCTaGCGGAGGTCGAAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LPCPDSLLSTHLTAVGPGLFPLS*RRSKAA
Trigger: GGCTGCCTTCGACCTCCGCCAGGAGAGTGGGAACAA...GCCAGGGCCGACTGCCGTAAGATGGGTGCTGAGAAGTGAGTCAGGGCAGGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378895.9
ENST00000394901.7
CDS-3UTR CCA 90 bp CTGCCCTGCCCTGACTCACTTCTCAGCACCCATCTTACGGCAGTCGGCCCTGGCCACCAGCCAAGCCAATaGGCGCAAAAGTGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: LPCPDSLLSTHLTAVGPGHQPSQ*AQKWAQ
Trigger: CTGCGCCCACTTTTGCGCCCATTGGCTTGGCTGGTG...GCCAGGGCCGACTGCCGTAAGATGGGTGCTGAGAAGTGAGTCAGGGCAGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp GTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGCCTCGCGCCTCCCATAGCCGATaGGCTGCCCGGTCGTCTCGG +
Preference number: 4 (lower is better)
Translates to: VTTEVKITNPSVSRAWPRASHSR*AARSSR
Trigger: CCGAGACGACCGGGCAGCCCATCGGCTATGGGAGGC...GCGAGGCCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp GGGGCCCCAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGCCGACAGTGGGCAGCTaGGGCTACCACCACCACGCG +
Preference number: 4 (lower is better)
Translates to: GAPESNHGGQDHKPVSVQPTVGS*GYHHHA
Trigger: CGCGTGGTGGTGGTAGCCTCAGCTGCCCACTGTCGG...CTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTGGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp CGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTACTCACTTCCTCCTACTCACTGTaGGACCCTAGGCGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: RPWPQTLGFRSQALLLLTSSYSL*DPRRVP
Trigger: AGGGACTCGCCTAGGGTCTCACAGTGAGTAGGAGGA...AGTGAGTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp TCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTACTCACTCCTCCTACTCACTGTaGGACCCTAGGCGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: SALASDPWVQIPGPPPTHSSYSL*DPRRVP
Trigger: AGGGACTCGCCTAGGGTCTCACAGTGAGTAGGAGGA...GTGAGTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp ATCACAAACCCGTCAGTGTCCAGGGCATGGCCTCGCACACATCCGAGGTTTTCAGCTGCCGATCCGCCCTaGACAGGCCTGGAACGGCGC +
Preference number: 4 (lower is better)
Translates to: ITNPSVSRAWPRTHPRFSAADPP*TGLERR
Trigger: GCGCCGTTCCAGGCCTGTGCAGGGCGGATCGGCAGC...TGAAAACCTCGGATGTGTGCGAGGCCATGCCCTGGACACTGACGGGTTTGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378895.9
ENST00000394901.7
CDS-3UTR GCA 90 bp CAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGTCGCCGCCAGGCGGCTaGCGATCCGCCCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: QKVTTEVKITNPSVSRAWSPPGG*RSALHR
Trigger: CCTGTGCAGGGCGGATCGGCAGCCGCCTGGCGGCGA...CCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378895.9
ENST00000394901.7
CDS-3UTR GCA 90 bp GGTCAACGCGCTTTATTCCGAGGGGCTTCAGATACAGATGACCCCAGCCCTGCATATGCCCGCAGCTCCTaGCGCCAGCCCACCACTGGG +
Preference number: 4 (lower is better)
Translates to: GQRALFRGASDTDDPSPAYARSS*RQPTTG
Trigger: CCCAGTGGTGGGCTGGCGGCAGGAGCTGCGGGCATA...TGCAGGGCTGGGGTCATCTGTATCTGAAGCCCCTCGGAATAAAGCGCGTTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp CAGTCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTACTCTTAGTGTCAGCATATaGCCGCAGCTCCTGCCGCCA +
Preference number: 4 (lower is better)
Translates to: QSALASDPWVQIPGPPPTLSVSI*PQLLPP
Trigger: TGGCGGCAGGAGCTGCGGGCATATGCTGACACTAAG...AGTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp TCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTACTCACCGATACCAGCTGCCCTaGCCTGACTCACTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: SALASDPWVQIPGPPPTHRYQLP*PDSLLS
Trigger: GCTGAGAAGTGAGTCAGGGCAGGGCAGCTGGTATCG...GTGAGTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp TCTTACGGCAGTCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCACCTCGATACCAGCTaGCCTGCCCTGACTCACTTC +
Preference number: 4 (lower is better)
Translates to: SYGSRPWPQTLGFRSQALHLDTS*PALTHF
Trigger: GAAGTGAGTCAGGGCAGGGCAGCTGGTATCGAGGTG...GAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGACTGCCGTAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp GTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGCCTCGCCCGCCAGCCCACCACTaGGCGGTCCAGGCGTTTGAA +
Preference number: 4 (lower is better)
Translates to: VTTEVKITNPSVSRAWPRPPAHH*AVQAFE
Trigger: TTCAAACGCCTGGACCGCCCAGTGGTGGGCTGGCGG...GCGAGGCCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp CAGATGACCCCAGCCCTGCATCCGCCCGGAAGGCGTCCCCTTACTCCCATGGGGTCTGAGTCCTCAGACTaGGGGTCTTCATCGGGTTCA +
Preference number: 4 (lower is better)
Translates to: QMTPALHPPGRRPLTPMGSESSD*GSSSGS
Trigger: TGAACCCGATGAAGACCCCCAGTCTGAGGACTCAGA...CCCCATGGGAGTAAGGGGACGCCTTCCGGGCGGATGCAGGGCTGGGGTCATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp CGGCAGTCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTGTGAGCTCTGAGGGCTaGGGTAAGGTTGAGAAACTG +
Preference number: 4 (lower is better)
Translates to: RQSALASDPWVQIPGPPPVSSEG*GKVEKL
Trigger: CAGTTTCTCAACCTTACCCCAGCCCTCAGAGCTCAC...AGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGACTGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp GAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGCCCCGACAGTGGGCAGCTaGGGCTACCACCACCACGCG +
Preference number: 4 (lower is better)
Translates to: ESNHGGQDHKPVSVQGMAPTVGS*GYHHHA
Trigger: CGCGTGGTGGTGGTAGCCTCAGCTGCCCACTGTCGG...GGCCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp AACCCGTCAGTGTCCAGGGCATGGCCTCGCACACATCCGAGGTTTTCAAGGACCCCAGCTGCCCTGCCCTaGCTCACTTCTCAGCACCCA +
Preference number: 4 (lower is better)
Translates to: NPSVSRAWPRTHPRFSRTPAALP*LTSQHP
Trigger: TGGGTGCTGAGAAGTGAGTCAGGGCAGGGCAGCTGG...GGTCCTTGAAAACCTCGGATGTGTGCGAGGCCATGCCCTGGACACTGACGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp GCCCTGACTCACTTCTCAGCACCCATCTTACGGCAGTCGGCCCTGGCCTCAGACCACCTCGATACCAGCTaGCCTGCCCTGACTCACTTC +
Preference number: 4 (lower is better)
Translates to: ALTHFSAPILRQSALASDHLDTS*PALTHF
Trigger: GAAGTGAGTCAGGGCAGGGCAGCTGGTATCGAGGTG...GTCTGAGGCCAGGGCCGACTGCCGTAAGATGGGTGCTGAGAAGTGAGTCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp TGCCCTGACTCACTTCTCAGCACCCATCTTACGGCAGTCGGCCCTGGCCTCAGACGAGTTCACAGGCCCTaGGTGGGCTGCATAGCAGGT +
Preference number: 4 (lower is better)
Translates to: CPDSLLSTHLTAVGPGLRRVHRP*VGCIAG
Trigger: ACCTGCTATGCAGCCCACCCAGGGCCTGTGAACTCG...TCTGAGGCCAGGGCCGACTGCCGTAAGATGGGTGCTGAGAAGTGAGTCAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp ATCACAAACCCGTCAGTGTCCAGGGCATGGCCTCGCACACATCCGAGGTTTTCACTGGGCACCCCCTCTTaGTGCCCGGAGCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: ITNPSVSRAWPRTHPRFSLGTPS*CPEHQP
Trigger: TGGCTGGTGCTCCGGGCACCAAGAGGGGGTGCCCAG...TGAAAACCTCGGATGTGTGCGAGGCCATGCCCTGGACACTGACGGGTTTGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp GCCCTGACTCACTTCTCAGCACCCATCTTACGGCAGTCGGCCCTGGCCTCAGACTACCGGCATTGTGGATaGGGATGTCCAACCGTGGCT +
Preference number: 4 (lower is better)
Translates to: ALTHFSAPILRQSALASDYRHCG*GCPTVA
Trigger: AGCCACGGTTGGACATCCTCATCCACAATGCCGGTA...GTCTGAGGCCAGGGCCGACTGCCGTAAGATGGGTGCTGAGAAGTGAGTCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378895.9
ENST00000394901.7
CDS-3UTR TCA 90 bp AGATGTCCAGGGCACAGCTTGGGGCCCCAGAAAGTAACCACGGAGGTCAAGATCGGGCTGCATAGCAGGTaGCGCCAGTGGCCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: RCPGHSLGPQKVTTEVKIGLHSR*RQWPQA
Trigger: AGCTTGAGGCCACTGGCGTCACCTGCTATGCAGCCC...GATCTTGACCTCCGTGGTTACTTTCTGGGGCCCCAAGCTGTGCCCTGGACATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp TCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTACTCACCAAAATATCTCCCACTaGGGGGCTCGATGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: SALASDPWVQIPGPPPTHQNISH*GARCPL
Trigger: AAGAGGGCATCGAGCCCCTCAGTGGGAGATATTTTG...GTGAGTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp AACCCGTCAGTGTCCAGGGCATGGCCTCGCACACATCCGAGGTTTTCAAGGACCGGCTTCAGATACAGATaGCCCCAGCCCTGCATCCGC +
Preference number: 4 (lower is better)
Translates to: NPSVSRAWPRTHPRFSRTGFRYR*PQPCIR
Trigger: GCGGATGCAGGGCTGGGGTCATCTGTATCTGAAGCC...GGTCCTTGAAAACCTCGGATGTGTGCGAGGCCATGCCCTGGACACTGACGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp TGGCCTCGCACACATCCGAGGTTTTCAAGGACCATGAAGTGCCATGGCAAGCATTATGCCCGCAGCTCCTaGCGCCAGCCCACCACTGGG +
Preference number: 4 (lower is better)
Translates to: WPRTHPRFSRTMKCHGKHYARSS*RQPTTG
Trigger: CCCAGTGGTGGGCTGGCGGCAGGAGCTGCGGGCATA...ATGCTTGCCATGGCACTTCATGGTCCTTGAAAACCTCGGATGTGTGCGAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp TGCCCTGACTCACTTCTCAGCACCCATCTTACGGCAGTCGGCCCTGGCCTCAGACTTAGTGTCAGCATATaGCCGCAGCTCCTGCCGCCA +
Preference number: 4 (lower is better)
Translates to: CPDSLLSTHLTAVGPGLRLSVSI*PQLLPP
Trigger: TGGCGGCAGGAGCTGCGGGCATATGCTGACACTAAG...TCTGAGGCCAGGGCCGACTGCCGTAAGATGGGTGCTGAGAAGTGAGTCAGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp GCACAGCTTGGGGCCCCAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGGCCCTGGGTGGGCTaGATAGCAGGTGACGCCAGT +
Preference number: 4 (lower is better)
Translates to: AQLGAPESNHGGQDHKPVRPWVG*IAGDAS
Trigger: ACTGGCGTCACCTGCTATGCAGCCCACCCAGGGCCT...GACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTGGGGCCCCAAGCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp GGGGCCCCAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGAGGCCCTGGGTGGGCTaGATAGCAGGTGACGCCAGT +
Preference number: 4 (lower is better)
Translates to: GAPESNHGGQDHKPVSVQRPWVG*IAGDAS
Trigger: ACTGGCGTCACCTGCTATGCAGCCCACCCAGGGCCT...CTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTGGGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp GTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGCCTCGCAGCTCAGAAAGGCAGTaGCAAAGGCCCGCACCGAGG +
Preference number: 4 (lower is better)
Translates to: VTTEVKITNPSVSRAWPRSSERQ*QRPAPR
Trigger: CCTCGGTGCGGGCCTTTGCCACTGCCTTTCTGAGCT...GCGAGGCCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378895.9
ENST00000394901.7
CDS-3UTR CCA 90 bp TCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTACTCACAGAAAGGGACCGATATaGTTCACCCGAAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SALASDPWVQIPGPPPTHRKGPI*FTRSSR
Trigger: CCTGCTGCTTCGGGTGAACCATATCGGTCCCTTTCT...GTGAGTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp ACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGCCTCGCACACATAGACGTCCCCGACAGTaGGCAGCTGAGGCTACCACC +
Preference number: 4 (lower is better)
Translates to: TEVKITNPSVSRAWPRTHRRPRQ*AAEATT
Trigger: GGTGGTAGCCTCAGCTGCCCACTGTCGGGGACGTCT...ATGTGTGCGAGGCCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp AACCCGTCAGTGTCCAGGGCATGGCCTCGCACACATCCGAGGTTTTCAAGGACCCACCAGCCAAGCCAATaGGCGCAAAAGTGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: NPSVSRAWPRTHPRFSRTHQPSQ*AQKWAQ
Trigger: CTGCGCCCACTTTTGCGCCCATTGGCTTGGCTGGTG...GGTCCTTGAAAACCTCGGATGTGTGCGAGGCCATGCCCTGGACACTGACGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp AACCCGTCAGTGTCCAGGGCATGGCCTCGCACACATCCGAGGTTTTCAAGGACCCAATACAGGGGTGTCTaGGCACCCCCTCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: NPSVSRAWPRTHPRFSRTQYRGV*APPLGA
Trigger: GGCACCAAGAGGGGGTGCCCAGACACCCCTGTATTG...GGTCCTTGAAAACCTCGGATGTGTGCGAGGCCATGCCCTGGACACTGACGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp GAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGCCGGCGGTCCAGGCGTTTaGAGTCAAGACGTCCCCGAC +
Preference number: 4 (lower is better)
Translates to: ESNHGGQDHKPVSVQGMAGGPGV*SQDVPD
Trigger: GTCGGGGACGTCTTGACTTCAAACGCCTGGACCGCC...GGCCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp AACCCGTCAGTGTCCAGGGCATGGCCTCGCACACATCCGAGGTTTTCAAGGACCGCAAGCATCCTGGCCTaGGGGTTAGGAGAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: NPSVSRAWPRTHPRFSRTASILA*GLGELD
Trigger: ATCCAGCTCTCCTAACCCTCAGGCCAGGATGCTTGC...GGTCCTTGAAAACCTCGGATGTGTGCGAGGCCATGCCCTGGACACTGACGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp GGGGCCCCAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCTTCAGATACAGATaGCCCCAGCCCTGCATCCGC +
Preference number: 4 (lower is better)
Translates to: GAPESNHGGQDHKPVSVQGFRYR*PQPCIR
Trigger: GCGGATGCAGGGCTGGGGTCATCTGTATCTGAAGCC...CTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTGGGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp CTACATCCAAATTTCCGAGAAGCACAGTGTCTAGCATACCCCTATCTCTCCATCCTCCGCACTCACCCGTaGCCACGGCCGTGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: LHPNFREAQCLAYPYLSILRTHP*PRPCGP
Trigger: GGGGCCGCACGGCCGTGGTCACGGGTGAGTGCGGAG...GATGGAGAGATAGGGGTATGCTAGACACTGTGCTTCTCGGAAATTTGGATGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394901.7
CDS-3UTR GCA 90 bp TCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTACTCACACATTGCAAACTCCCTaGCTCTGCTCCAGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: SALASDPWVQIPGPPPTHTLQTP*LCSRAD
Trigger: ATCAGCTCTGGAGCAGAGGCAGGGAGTTTGCAATGT...GTGAGTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp CGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTACTCACTCTGATACCGGCATTGTaGATGAGGATGTCCAACCGT +
Preference number: 4 (lower is better)
Translates to: RPWPQTLGFRSQALLLLTLIPAL*MRMSNR
Trigger: ACGGTTGGACATCCTCATCCACAATGCCGGTATCAG...AGTGAGTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378895.9
ENST00000394901.7
CDS-3UTR CCA 90 bp GCACAGCTTGGGGCCCCAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCTGGCCTCAAGCTGGTTaGCGAGCTCCCGGGCAAACA +
Preference number: 4 (lower is better)
Translates to: AQLGAPESNHGGQDHKPVWPQAG*RAPGQT
Trigger: TGTTTGCCCGGGAGCTCGCCAACCAGCTTGAGGCCA...GACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTGGGGCCCCAAGCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp CAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGCCAGTGGCCTCAAGCTaGTTGGCGAGCTCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: QKVTTEVKITNPSVSRAWPVASS*LASSRA
Trigger: TGCCCGGGAGCTCGCCAACCAGCTTGAGGCCACTGG...CCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp ATGGCCTCGCACACATCCGAGGTTTTCAAGGACCATGAAGTGCCATGGCAAGCACCAGTGGCCTCAAGCTaGTTGGCGAGCTCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: MASHTSEVFKDHEVPWQAPVASS*LASSRA
Trigger: TGCCCGGGAGCTCGCCAACCAGCTTGAGGCCACTGG...TGCTTGCCATGGCACTTCATGGTCCTTGAAAACCTCGGATGTGTGCGAGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp GCACAGCTTGGGGCCCCAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCTCAGTGTCCAGGGCATaGCCTCGCACACATCCGAGG +
Preference number: 4 (lower is better)
Translates to: AQLGAPESNHGGQDHKPVSVSRA*PRTHPR
Trigger: CCTCGGATGTGTGCGAGGCCATGCCCTGGACACTGA...GACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTGGGGCCCCAAGCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp AACCCGTCAGTGTCCAGGGCATGGCCTCGCACACATCCGAGGTTTTCAAGGACCGTCCCCTTACTCCCATaGGGCACCTCGATACCAGCT +
Preference number: 4 (lower is better)
Translates to: NPSVSRAWPRTHPRFSRTVPLLP*GTSIPA
Trigger: AGCTGGTATCGAGGTGCCCCATGGGAGTAAGGGGAC...GGTCCTTGAAAACCTCGGATGTGTGCGAGGCCATGCCCTGGACACTGACGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp TGCCCTGACTCACTTCTCAGCACCCATCTTACGGCAGTCGGCCCTGGCCTCAGACTTAGACAAATCTGGTaGGCTCTGAGGGCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: CPDSLLSTHLTAVGPGLRLRQIW*ALRAGV
Trigger: TACCCCAGCCCTCAGAGCTCACCAGATTTGTCTAAG...TCTGAGGCCAGGGCCGACTGCCGTAAGATGGGTGCTGAGAAGTGAGTCAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp GCACAGCTTGGGGCCCCAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCTCCTCCTACTCACTGTaGGACCCTAGGCGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: AQLGAPESNHGGQDHKPVSSYSL*DPRRVP
Trigger: AGGGACTCGCCTAGGGTCTCACAGTGAGTAGGAGGA...GACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTGGGGCCCCAAGCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp AGATGTCCAGGGCACAGCTTGGGGCCCCAGAAAGTAACCACGGAGGTCAAGATCCGATACCAGCTGCCCTaGCCTGACTCACTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: RCPGHSLGPQKVTTEVKIRYQLP*PDSLLS
Trigger: GCTGAGAAGTGAGTCAGGGCAGGGCAGCTGGTATCG...GATCTTGACCTCCGTGGTTACTTTCTGGGGCCCCAAGCTGTGCCCTGGACATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp GAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGCCAGCTCAGAAAGGCAGTaGCAAAGGCCCGCACCGAGG +
Preference number: 4 (lower is better)
Translates to: ESNHGGQDHKPVSVQGMASSERQ*QRPAPR
Trigger: CCTCGGTGCGGGCCTTTGCCACTGCCTTTCTGAGCT...GGCCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378895.9
ENST00000394901.7
CDS-3UTR CCA 90 bp ACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGCCTCGCACACATAGCCATCCAGGAACATaGCGCAGGAACAGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: TEVKITNPSVSRAWPRTHSHPGT*RRNSSE
Trigger: CTCGGAGCTGTTCCTGCGCCATGTTCCTGGATGGCT...ATGTGTGCGAGGCCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp TGGCCTCGCACACATCCGAGGTTTTCAAGGACCATGAAGTGCCATGGCAAGCATCTGCCAGCCTCTTGCTaGCCTCCCATAGCCGATGGG +
Preference number: 4 (lower is better)
Translates to: WPRTHPRFSRTMKCHGKHLPASC*PPIADG
Trigger: CCCATCGGCTATGGGAGGCCAGCAAGAGGCTGGCAG...ATGCTTGCCATGGCACTTCATGGTCCTTGAAAACCTCGGATGTGTGCGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp ATGGCCTCGCACACATCCGAGGTTTTCAAGGACCATGAAGTGCCATGGCAAGCACTGCCAGCCTCTTGCTaGCCTCCCATAGCCGATGGG +
Preference number: 4 (lower is better)
Translates to: MASHTSEVFKDHEVPWQALPASC*PPIADG
Trigger: CCCATCGGCTATGGGAGGCCAGCAAGAGGCTGGCAG...TGCTTGCCATGGCACTTCATGGTCCTTGAAAACCTCGGATGTGTGCGAGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp GGTCAACGCGCTTTATTCCGAGGGGCTTCAGATACAGATGACCCCAGCCCTGCAGTCCCCTTACTCCCATaGGGCACCTCGATACCAGCT +
Preference number: 4 (lower is better)
Translates to: GQRALFRGASDTDDPSPAVPLLP*GTSIPA
Trigger: AGCTGGTATCGAGGTGCCCCATGGGAGTAAGGGGAC...TGCAGGGCTGGGGTCATCTGTATCTGAAGCCCCTCGGAATAAAGCGCGTTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp GTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGCCTCGCCAAAATATCTCCCACTaGGGGGCTCGATGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: VTTEVKITNPSVSRAWPRQNISH*GARCPL
Trigger: AAGAGGGCATCGAGCCCCTCAGTGGGAGATATTTTG...GCGAGGCCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp GTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGCCTCGCCTTAGACAAATCTGGTaGGCTCTGAGGGCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: VTTEVKITNPSVSRAWPRLRQIW*ALRAGV
Trigger: TACCCCAGCCCTCAGAGCTCACCAGATTTGTCTAAG...GCGAGGCCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp GAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGCCGCAAGCATCCTGGCCTaGGGGTTAGGAGAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: ESNHGGQDHKPVSVQGMAASILA*GLGELD
Trigger: ATCCAGCTCTCCTAACCCTCAGGCCAGGATGCTTGC...GGCCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp CAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGTGGCCTCAAGCTGGTTaGCGAGCTCCCGGGCAAACA +
Preference number: 4 (lower is better)
Translates to: QKVTTEVKITNPSVSRAWWPQAG*RAPGQT
Trigger: TGTTTGCCCGGGAGCTCGCCAACCAGCTTGAGGCCA...CCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp ATGGCCTCGCACACATCCGAGGTTTTCAAGGACCATGAAGTGCCATGGCAAGCATGGCCTCAAGCTGGTTaGCGAGCTCCCGGGCAAACA +
Preference number: 4 (lower is better)
Translates to: MASHTSEVFKDHEVPWQAWPQAG*RAPGQT
Trigger: TGTTTGCCCGGGAGCTCGCCAACCAGCTTGAGGCCA...TGCTTGCCATGGCACTTCATGGTCCTTGAAAACCTCGGATGTGTGCGAGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp ATGGCCTCGCACACATCCGAGGTTTTCAAGGACCATGAAGTGCCATGGCAAGCACACCAGCCAAGCCAATaGGCGCAAAAGTGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: MASHTSEVFKDHEVPWQAHQPSQ*AQKWAQ
Trigger: CTGCGCCCACTTTTGCGCCCATTGGCTTGGCTGGTG...TGCTTGCCATGGCACTTCATGGTCCTTGAAAACCTCGGATGTGTGCGAGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp GGGGCCCCAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGTCAAGGACCATGAAGTaGCATGGCAAGCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: GAPESNHGGQDHKPVSVQSRTMK*HGKHPG
Trigger: GCCAGGATGCTTGCCATGGCACTTCATGGTCCTTGA...CTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTGGGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp TGGCCTCGCACACATCCGAGGTTTTCAAGGACCATGAAGTGCCATGGCAAGCATCACCTCGATACCAGCTaGCCTGCCCTGACTCACTTC +
Preference number: 4 (lower is better)
Translates to: WPRTHPRFSRTMKCHGKHHLDTS*PALTHF
Trigger: GAAGTGAGTCAGGGCAGGGCAGCTGGTATCGAGGTG...ATGCTTGCCATGGCACTTCATGGTCCTTGAAAACCTCGGATGTGTGCGAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp GAAGCACAGTGTCTAGCATACCCCTATCTCTCCATCTGGGGTTACTGTCACTCTCCGTCATCTTTCCGATaGCGCTGTTGGCGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: EAQCLAYPYLSIWGYCHSPSSFR*RCWRLR
Trigger: CCGCAGGCGCCAACAGCGGCATCGGAAAGATGACGG...AGAGTGACAGTAACCCCAGATGGAGAGATAGGGGTATGCTAGACACTGTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394901.7
CDS-3UTR CCA 90 bp GGGGCCCCAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGAGAAAGGGACCGATATaGTTCACCCGAAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GAPESNHGGQDHKPVSVQRKGPI*FTRSSR
Trigger: CCTGCTGCTTCGGGTGAACCATATCGGTCCCTTTCT...CTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTGGGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp CAGGGCATGGCCTCGCACACATCCGAGGTTTTCAAGGACCATGAAGTGCCATGGAGAAAGGGACCGATATaGTTCACCCGAAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QGMASHTSEVFKDHEVPWRKGPI*FTRSSR
Trigger: CCTGCTGCTTCGGGTGAACCATATCGGTCCCTTTCT...CCATGGCACTTCATGGTCCTTGAAAACCTCGGATGTGTGCGAGGCCATGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp CAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGAGCCATCCAGGAACATaGCGCAGGAACAGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: QKVTTEVKITNPSVSRAWSHPGT*RRNSSE
Trigger: CTCGGAGCTGTTCCTGCGCCATGTTCCTGGATGGCT...CCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp TGGCCTCGCACACATCCGAGGTTTTCAAGGACCATGAAGTGCCATGGCAAGCATCAATGGGCGCAAAAGTaGGCGCAGCCATCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: WPRTHPRFSRTMKCHGKHQWAQK*AQPSRN
Trigger: GTTCCTGGATGGCTGCGCCCACTTTTGCGCCCATTG...ATGCTTGCCATGGCACTTCATGGTCCTTGAAAACCTCGGATGTGTGCGAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp AGATGTCCAGGGCACAGCTTGGGGCCCCAGAAAGTAACCACGGAGGTCAAGATCGTGAGCTCTGAGGGCTaGGGTAAGGTTGAGAAACTG +
Preference number: 4 (lower is better)
Translates to: RCPGHSLGPQKVTTEVKIVSSEG*GKVEKL
Trigger: CAGTTTCTCAACCTTACCCCAGCCCTCAGAGCTCAC...GATCTTGACCTCCGTGGTTACTTTCTGGGGCCCCAAGCTGTGCCCTGGACATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp GTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGCCTCGCCCCTATCTCTCCATCTaGGGTTACTGTCACTCTCAG +
Preference number: 4 (lower is better)
Translates to: VTTEVKITNPSVSRAWPRPYLSI*GYCHSQ
Trigger: CTGAGAGTGACAGTAACCCCAGATGGAGAGATAGGG...GCGAGGCCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp CAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGGTCCCCTTACTCCCATaGGGCACCTCGATACCAGCT +
Preference number: 4 (lower is better)
Translates to: QKVTTEVKITNPSVSRAWVPLLP*GTSIPA
Trigger: AGCTGGTATCGAGGTGCCCCATGGGAGTAAGGGGAC...CCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp CAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGTACCGGCATTGTGGATaGGGATGTCCAACCGTGGCT +
Preference number: 4 (lower is better)
Translates to: QKVTTEVKITNPSVSRAWYRHCG*GCPTVA
Trigger: AGCCACGGTTGGACATCCTCATCCACAATGCCGGTA...CCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378895.9
ENST00000394901.7
CDS-3UTR GCA 90 bp GGGGCCCCAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGCAAACTCCCTGCCTCTaGTCCAGAGCTGATCAGAAT +
Preference number: 4 (lower is better)
Translates to: GAPESNHGGQDHKPVSVQQTPCL*SRADQN
Trigger: ATTCTGATCAGCTCTGGAGCAGAGGCAGGGAGTTTG...CTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTGGGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp GGGGCCCCAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGACATTGCAAACTCCCTaGCTCTGCTCCAGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: GAPESNHGGQDHKPVSVQTLQTP*LCSRAD
Trigger: ATCAGCTCTGGAGCAGAGGCAGGGAGTTTGCAATGT...CTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTGGGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp AGATGTCCAGGGCACAGCTTGGGGCCCCAGAAAGTAACCACGGAGGTCAAGATCCTGATACCGGCATTGTaGATGAGGATGTCCAACCGT +
Preference number: 4 (lower is better)
Translates to: RCPGHSLGPQKVTTEVKILIPAL*MRMSNR
Trigger: ACGGTTGGACATCCTCATCCACAATGCCGGTATCAG...GATCTTGACCTCCGTGGTTACTTTCTGGGGCCCCAAGCTGTGCCCTGGACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378895.9
ENST00000394901.7
CDS-3UTR CCA 90 bp GTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGCCTCGCGGCACCTCTTCCACATaGCAGTTGGCAAAATATCTC +
Preference number: 4 (lower is better)
Translates to: VTTEVKITNPSVSRAWPRGTSST*QLAKYL
Trigger: GAGATATTTTGCCAACTGCCATGTGGAAGAGGTGCC...GCGAGGCCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp GAAGCACAGTGTCTAGCATACCCCTATCTCTCCATCTGGGGTTACTGTCACTCTTCAGTGTCCAGGGCATaGCCTCGCACACATCCGAGG +
Preference number: 4 (lower is better)
Translates to: EAQCLAYPYLSIWGYCHSSVSRA*PRTHPR
Trigger: CCTCGGATGTGTGCGAGGCCATGCCCTGGACACTGA...AGAGTGACAGTAACCCCAGATGGAGAGATAGGGGTATGCTAGACACTGTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp CAGGGCATGGCCTCGCACACATCCGAGGTTTTCAAGGACCATGAAGTGCCATGGCCCTATCTCTCCATCTaGGGTTACTGTCACTCTCAG +
Preference number: 4 (lower is better)
Translates to: QGMASHTSEVFKDHEVPWPYLSI*GYCHSQ
Trigger: CTGAGAGTGACAGTAACCCCAGATGGAGAGATAGGG...CCATGGCACTTCATGGTCCTTGAAAACCTCGGATGTGTGCGAGGCCATGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp TGGCCTCGCACACATCCGAGGTTTTCAAGGACCATGAAGTGCCATGGCAAGCATCTTAGACAAATCTGGTaGGCTCTGAGGGCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: WPRTHPRFSRTMKCHGKHLRQIW*ALRAGV
Trigger: TACCCCAGCCCTCAGAGCTCACCAGATTTGTCTAAG...ATGCTTGCCATGGCACTTCATGGTCCTTGAAAACCTCGGATGTGTGCGAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp ATGGCCTCGCACACATCCGAGGTTTTCAAGGACCATGAAGTGCCATGGCAAGCAGGCAGTGCATCACATTaGAAACTCCCTGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: MASHTSEVFKDHEVPWQAGSASH*KLPASA
Trigger: AGCAGAGGCAGGGAGTTTGCAATGTGATGCACTGCC...TGCTTGCCATGGCACTTCATGGTCCTTGAAAACCTCGGATGTGTGCGAGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp CAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGGGCAGTGCATCACATTaGAAACTCCCTGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: QKVTTEVKITNPSVSRAWGSASH*KLPASA
Trigger: AGCAGAGGCAGGGAGTTTGCAATGTGATGCACTGCC...CCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp GAAGCACAGTGTCTAGCATACCCCTATCTCTCCATCTGGGGTTACTGTCACTCTCGATACCAGCTGCCCTaGCCTGACTCACTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: EAQCLAYPYLSIWGYCHSRYQLP*PDSLLS
Trigger: GCTGAGAAGTGAGTCAGGGCAGGGCAGCTGGTATCG...AGAGTGACAGTAACCCCAGATGGAGAGATAGGGGTATGCTAGACACTGTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp ACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGCCTCGCACACATGGCACCTCTTCCACATaGCAGTTGGCAAAATATCTC +
Preference number: 4 (lower is better)
Translates to: TEVKITNPSVSRAWPRTHGTSST*QLAKYL
Trigger: GAGATATTTTGCCAACTGCCATGTGGAAGAGGTGCC...ATGTGTGCGAGGCCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp GCACAGCTTGGGGCCCCAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCGGCACCTCTTCCACATaGCAGTTGGCAAAATATCTC +
Preference number: 4 (lower is better)
Translates to: AQLGAPESNHGGQDHKPVGTSST*QLAKYL
Trigger: GAGATATTTTGCCAACTGCCATGTGGAAGAGGTGCC...GACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTGGGGCCCCAAGCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp CAAAGGGATCAGTTCACTAATTCTCAATGTTGGCAGTGCATCACATTGCAAACTTTCCGATGCCGCTGTTaGCGCCTGCGGACCGCGGGC +
Preference number: 4 (lower is better)
Translates to: QRDQFTNSQCWQCITLQTFRCRC*RLRTAG
Trigger: GCCCGCGGTCCGCAGGCGCCAACAGCGGCATCGGAA...AGTTTGCAATGTGATGCACTGCCAACATTGAGAATTAGTGAACTGATCCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394901.7
CDS-3UTR TCA 90 bp TGCCCTGACTCACTTCTCAGCACCCATCTTACGGCAGTCGGCCCTGGCCTCAGAAATAAGGGTGGGGCCTaGAAATACTACATCCAAATT +
Preference number: 4 (lower is better)
Translates to: CPDSLLSTHLTAVGPGLRNKGGA*KYYIQI
Trigger: AATTTGGATGTAGTATTTTCAGGCCCCACCCTTATT...TCTGAGGCCAGGGCCGACTGCCGTAAGATGGGTGCTGAGAAGTGAGTCAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp CAAAGGGATCAGTTCACTAATTCTCAATGTTGGCAGTGCATCACATTGCAAACTCCCAGGCCCAAGCCCTaGCAGCCTCTTGCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: QRDQFTNSQCWQCITLQTPRPKP*QPLAGL
Trigger: GAGGCCAGCAAGAGGCTGGCAGGGCTTGGGCCTGGG...AGTTTGCAATGTGATGCACTGCCAACATTGAGAATTAGTGAACTGATCCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp CAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGACATTGCAAACTCCCTaGCTCTGCTCCAGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: QKVTTEVKITNPSVSRAWTLQTP*LCSRAD
Trigger: ATCAGCTCTGGAGCAGAGGCAGGGAGTTTGCAATGT...CCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp CAGGGCATGGCCTCGCACACATCCGAGGTTTTCAAGGACCATGAAGTGCCATGGTCTCAATGTTGGCAGTaGATCACATTGCAAACTCCC +
Preference number: 4 (lower is better)
Translates to: QGMASHTSEVFKDHEVPWSQCWQ*ITLQTP
Trigger: GGGAGTTTGCAATGTGATGCACTGCCAACATTGAGA...CCATGGCACTTCATGGTCCTTGAAAACCTCGGATGTGTGCGAGGCCATGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp ACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGCCTCGCACACATTCTCAATGTTGGCAGTaGATCACATTGCAAACTCCC +
Preference number: 4 (lower is better)
Translates to: TEVKITNPSVSRAWPRTHSQCWQ*ITLQTP
Trigger: GGGAGTTTGCAATGTGATGCACTGCCAACATTGAGA...ATGTGTGCGAGGCCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp CTACATCCAAATTTCCGAGAAGCACAGTGTCTAGCATACCCCTATCTCTCCATCCGAGTTCACAGGCCCTaGGTGGGCTGCATAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LHPNFREAQCLAYPYLSIRVHRP*VGCIAG
Trigger: ACCTGCTATGCAGCCCACCCAGGGCCTGTGAACTCG...GATGGAGAGATAGGGGTATGCTAGACACTGTGCTTCTCGGAAATTTGGATGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp CTGAAAATACTACATCCAAATTTCCGAGAAGCACAGTGTCTAGCATACCCCTATCTGGGCACCCCCTCTTaGTGCCCGGAGCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: LKILHPNFREAQCLAYPYLGTPS*CPEHQP
Trigger: TGGCTGGTGCTCCGGGCACCAAGAGGGGGTGCCCAG...ATAGGGGTATGCTAGACACTGTGCTTCTCGGAAATTTGGATGTAGTATTTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp TTTAACTACCTAGCTAGACGGTTGCAAAGGGATCAGTTCACTAATTCTCAATGTCCGACAGTGGGCAGCTaGGGCTACCACCACCACGCG +
Preference number: 4 (lower is better)
Translates to: FNYLARRLQRDQFTNSQCPTVGS*GYHHHA
Trigger: CGCGTGGTGGTGGTAGCCTCAGCTGCCCACTGTCGG...ACATTGAGAATTAGTGAACTGATCCCTTTGCAACCGTCTAGCTAGGTAGTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp GAAGCACAGTGTCTAGCATACCCCTATCTCTCCATCTGGGGTTACTGTCACTCTTCAAGGACCATGAAGTaGCATGGCAAGCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: EAQCLAYPYLSIWGYCHSSRTMK*HGKHPG
Trigger: GCCAGGATGCTTGCCATGGCACTTCATGGTCCTTGA...AGAGTGACAGTAACCCCAGATGGAGAGATAGGGGTATGCTAGACACTGTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp CCGAGAAGCACAGTGTCTAGCATACCCCTATCTCTCCATCTGGGGTTACTGTCACAAACTCCCTGCCTCTaGTCCAGAGCTGATCAGAAT +
Preference number: 4 (lower is better)
Translates to: PRSTVSSIPLSLHLGLLSQTPCL*SRADQN
Trigger: ATTCTGATCAGCTCTGGAGCAGAGGCAGGGAGTTTG...TGACAGTAACCCCAGATGGAGAGATAGGGGTATGCTAGACACTGTGCTTCTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp TGCAAAGGGATCAGTTCACTAATTCTCAATGTTGGCAGTGCATCACATTGCAAACCGCCAGCCCACCACTaGGCGGTCCAGGCGTTTGAA +
Preference number: 4 (lower is better)
Translates to: CKGISSLILNVGSASHCKPPAHH*AVQAFE
Trigger: TTCAAACGCCTGGACCGCCCAGTGGTGGGCTGGCGG...TTTGCAATGTGATGCACTGCCAACATTGAGAATTAGTGAACTGATCCCTTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp CCGAGAAGCACAGTGTCTAGCATACCCCTATCTCTCCATCTGGGGTTACTGTCACCCTATCTCTCCATCTaGGGTTACTGTCACTCTCAG +
Preference number: 4 (lower is better)
Translates to: PRSTVSSIPLSLHLGLLSPYLSI*GYCHSQ
Trigger: CTGAGAGTGACAGTAACCCCAGATGGAGAGATAGGG...TGACAGTAACCCCAGATGGAGAGATAGGGGTATGCTAGACACTGTGCTTCTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp AGATGTCCAGGGCACAGCTTGGGGCCCCAGAAAGTAACCACGGAGGTCAAGATCAATAAGGGTGGGGCCTaGAAATACTACATCCAAATT +
Preference number: 4 (lower is better)
Translates to: RCPGHSLGPQKVTTEVKINKGGA*KYYIQI
Trigger: AATTTGGATGTAGTATTTTCAGGCCCCACCCTTATT...GATCTTGACCTCCGTGGTTACTTTCTGGGGCCCCAAGCTGTGCCCTGGACATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp CAAAGGGATCAGTTCACTAATTCTCAATGTTGGCAGTGCATCACATTGCAAACTCCAGCTGCCCTGCCCTaGCTCACTTCTCAGCACCCA +
Preference number: 4 (lower is better)
Translates to: QRDQFTNSQCWQCITLQTPAALP*LTSQHP
Trigger: TGGGTGCTGAGAAGTGAGTCAGGGCAGGGCAGCTGG...AGTTTGCAATGTGATGCACTGCCAACATTGAGAATTAGTGAACTGATCCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp CAAAGGGATCAGTTCACTAATTCTCAATGTTGGCAGTGCATCACATTGCAAACTAGACGTCCCCGACAGTaGGCAGCTGAGGCTACCACC +
Preference number: 4 (lower is better)
Translates to: QRDQFTNSQCWQCITLQTRRPRQ*AAEATT
Trigger: GGTGGTAGCCTCAGCTGCCCACTGTCGGGGACGTCT...AGTTTGCAATGTGATGCACTGCCAACATTGAGAATTAGTGAACTGATCCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp CAAAGGGATCAGTTCACTAATTCTCAATGTTGGCAGTGCATCACATTGCAAACTCTGCCAGCCTCTTGCTaGCCTCCCATAGCCGATGGG +
Preference number: 4 (lower is better)
Translates to: QRDQFTNSQCWQCITLQTLPASC*PPIADG
Trigger: CCCATCGGCTATGGGAGGCCAGCAAGAGGCTGGCAG...AGTTTGCAATGTGATGCACTGCCAACATTGAGAATTAGTGAACTGATCCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp TTTAACTACCTAGCTAGACGGTTGCAAAGGGATCAGTTCACTAATTCTCAATGTGGGCTGCATAGCAGGTaGCGCCAGTGGCCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: FNYLARRLQRDQFTNSQCGLHSR*RQWPQA
Trigger: AGCTTGAGGCCACTGGCGTCACCTGCTATGCAGCCC...ACATTGAGAATTAGTGAACTGATCCCTTTGCAACCGTCTAGCTAGGTAGTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp ATCACAAACCCGTCAGTGTCCAGGGCATGGCCTCGCACACATCCGAGGTTTTCAAATAAGGGTGGGGCCTaGAAATACTACATCCAAATT +
Preference number: 4 (lower is better)
Translates to: ITNPSVSRAWPRTHPRFSNKGGA*KYYIQI
Trigger: AATTTGGATGTAGTATTTTCAGGCCCCACCCTTATT...TGAAAACCTCGGATGTGTGCGAGGCCATGCCCTGGACACTGACGGGTTTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp CTGAAAATACTACATCCAAATTTCCGAGAAGCACAGTGTCTAGCATACCCCTATCAATACAGGGGTGTCTaGGCACCCCCTCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LKILHPNFREAQCLAYPYQYRGV*APPLGA
Trigger: GGCACCAAGAGGGGGTGCCCAGACACCCCTGTATTG...ATAGGGGTATGCTAGACACTGTGCTTCTCGGAAATTTGGATGTAGTATTTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp CTACATCCAAATTTCCGAGAAGCACAGTGTCTAGCATACCCCTATCTCTCCATCTCTGAGTCCTCAGACTaGGGGTCTTCATCGGGTTCA +
Preference number: 4 (lower is better)
Translates to: LHPNFREAQCLAYPYLSISESSD*GSSSGS
Trigger: TGAACCCGATGAAGACCCCCAGTCTGAGGACTCAGA...GATGGAGAGATAGGGGTATGCTAGACACTGTGCTTCTCGGAAATTTGGATGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp TGCAAAGGGATCAGTTCACTAATTCTCAATGTTGGCAGTGCATCACATTGCAAATCAGTGTCCAGGGCATaGCCTCGCACACATCCGAGG +
Preference number: 4 (lower is better)
Translates to: CKGISSLILNVGSASHCKSVSRA*PRTHPR
Trigger: CCTCGGATGTGTGCGAGGCCATGCCCTGGACACTGA...TTTGCAATGTGATGCACTGCCAACATTGAGAATTAGTGAACTGATCCCTTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp GAAGCACAGTGTCTAGCATACCCCTATCTCTCCATCTGGGGTTACTGTCACTCTTCTCAATGTTGGCAGTaGATCACATTGCAAACTCCC +
Preference number: 4 (lower is better)
Translates to: EAQCLAYPYLSIWGYCHSSQCWQ*ITLQTP
Trigger: GGGAGTTTGCAATGTGATGCACTGCCAACATTGAGA...AGAGTGACAGTAACCCCAGATGGAGAGATAGGGGTATGCTAGACACTGTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp TTTAACTACCTAGCTAGACGGTTGCAAAGGGATCAGTTCACTAATTCTCAATGTTTGTTCCCACTCTCCTaGCGGAGGTCGAAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: FNYLARRLQRDQFTNSQCLFPLS*RRSKAA
Trigger: GGCTGCCTTCGACCTCCGCCAGGAGAGTGGGAACAA...ACATTGAGAATTAGTGAACTGATCCCTTTGCAACCGTCTAGCTAGGTAGTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378895.9
ENST00000394901.7
CDS-3UTR CCA 90 bp TTTAACTACCTAGCTAGACGGTTGCAAAGGGATCAGTTCACTAATTCTCAATGTCGAGTTCACAGGCCCTaGGTGGGCTGCATAGCAGGT +
Preference number: 4 (lower is better)
Translates to: FNYLARRLQRDQFTNSQCRVHRP*VGCIAG
Trigger: ACCTGCTATGCAGCCCACCCAGGGCCTGTGAACTCG...ACATTGAGAATTAGTGAACTGATCCCTTTGCAACCGTCTAGCTAGGTAGTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp TGCAAAGGGATCAGTTCACTAATTCTCAATGTTGGCAGTGCATCACATTGCAAAAGCCATCCAGGAACATaGCGCAGGAACAGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: CKGISSLILNVGSASHCKSHPGT*RRNSSE
Trigger: CTCGGAGCTGTTCCTGCGCCATGTTCCTGGATGGCT...TTTGCAATGTGATGCACTGCCAACATTGAGAATTAGTGAACTGATCCCTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp CAAAGGGATCAGTTCACTAATTCTCAATGTTGGCAGTGCATCACATTGCAAACTCAATGGGCGCAAAAGTaGGCGCAGCCATCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: QRDQFTNSQCWQCITLQTQWAQK*AQPSRN
Trigger: GTTCCTGGATGGCTGCGCCCACTTTTGCGCCCATTG...AGTTTGCAATGTGATGCACTGCCAACATTGAGAATTAGTGAACTGATCCCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp TTTAACTACCTAGCTAGACGGTTGCAAAGGGATCAGTTCACTAATTCTCAATGTGCAAGCATCCTGGCCTaGGGGTTAGGAGAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: FNYLARRLQRDQFTNSQCASILA*GLGELD
Trigger: ATCCAGCTCTCCTAACCCTCAGGCCAGGATGCTTGC...ACATTGAGAATTAGTGAACTGATCCCTTTGCAACCGTCTAGCTAGGTAGTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR TCA 90 bp CTGAAAATACTACATCCAAATTTCCGAGAAGCACAGTGTCTAGCATACCCCTATCAAAATATCTCCCACTaGGGGGCTCGATGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: LKILHPNFREAQCLAYPYQNISH*GARCPL
Trigger: AAGAGGGCATCGAGCCCCTCAGTGGGAGATATTTTG...ATAGGGGTATGCTAGACACTGTGCTTCTCGGAAATTTGGATGTAGTATTTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp TGCAAAGGGATCAGTTCACTAATTCTCAATGTTGGCAGTGCATCACATTGCAAAGGCAGTGCATCACATTaGAAACTCCCTGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: CKGISSLILNVGSASHCKGSASH*KLPASA
Trigger: AGCAGAGGCAGGGAGTTTGCAATGTGATGCACTGCC...TTTGCAATGTGATGCACTGCCAACATTGAGAATTAGTGAACTGATCCCTTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp TTTAACTACCTAGCTAGACGGTTGCAAAGGGATCAGTTCACTAATTCTCAATGTGAGGATGTCCAACCGTaGCTCAGAGCTCAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: FNYLARRLQRDQFTNSQCEDVQP*LRAQKG
Trigger: GCCTTTCTGAGCTCTGAGCCACGGTTGGACATCCTC...ACATTGAGAATTAGTGAACTGATCCCTTTGCAACCGTCTAGCTAGGTAGTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378895.9
ENST00000394901.7
CDS-3UTR CCA 90 bp TGCAAAGGGATCAGTTCACTAATTCTCAATGTTGGCAGTGCATCACATTGCAAATCTGAGTCCTCAGACTaGGGGTCTTCATCGGGTTCA +
Preference number: 4 (lower is better)
Translates to: CKGISSLILNVGSASHCKSESSD*GSSSGS
Trigger: TGAACCCGATGAAGACCCCCAGTCTGAGGACTCAGA...TTTGCAATGTGATGCACTGCCAACATTGAGAATTAGTGAACTGATCCCTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CCA 90 bp CAAAGGGATCAGTTCACTAATTCTCAATGTTGGCAGTGCATCACATTGCAAACTGTGAGCTCTGAGGGCTaGGGTAAGGTTGAGAAACTG +
Preference number: 4 (lower is better)
Translates to: QRDQFTNSQCWQCITLQTVSSEG*GKVEKL
Trigger: CAGTTTCTCAACCTTACCCCAGCCCTCAGAGCTCAC...AGTTTGCAATGTGATGCACTGCCAACATTGAGAATTAGTGAACTGATCCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp TTTAACTACCTAGCTAGACGGTTGCAAAGGGATCAGTTCACTAATTCTCAATGTTCAAGGACCATGAAGTaGCATGGCAAGCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: FNYLARRLQRDQFTNSQCSRTMK*HGKHPG
Trigger: GCCAGGATGCTTGCCATGGCACTTCATGGTCCTTGA...ACATTGAGAATTAGTGAACTGATCCCTTTGCAACCGTCTAGCTAGGTAGTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR GCA 90 bp CTGAAAATACTACATCCAAATTTCCGAGAAGCACAGTGTCTAGCATACCCCTATCAAACTCCCTGCCTCTaGTCCAGAGCTGATCAGAAT +
Preference number: 4 (lower is better)
Translates to: LKILHPNFREAQCLAYPYQTPCL*SRADQN
Trigger: ATTCTGATCAGCTCTGGAGCAGAGGCAGGGAGTTTG...ATAGGGGTATGCTAGACACTGTGCTTCTCGGAAATTTGGATGTAGTATTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS TCA 90 bp CCGATGCCGCTGTTGGCGCCTGCGGACCGCGGGCGGGAGCCGAGCTaGGCTGAGCCCGGCGGGCCGCTGCTACCGCCGGCCCGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: PMPLLAPADRGREPS*AEPGGPLLPPARPP
Trigger: AGGAGGCCGGGCCGGCGGTAGCAGCGGCCCGCCGGGCTCAGCTCAGCTCGGCTCCCGCCCGCGGTCCGCAGGCGCCAACAGCGGCATCGG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394901.7
CDS GCA 90 bp CCCCGCACCGCCCTGGATCGCCGCCAGGCGGCTGCCGATCCGCCCTaGACAGGCCTGGAACGGCGCCCGGGCGCGTCAGCCTCCGAAGGC +
Preference number: 5 (lower is better)
Translates to: PRTALDRRQAAADPP*TGLERRPGASASEG
Trigger: GCCTTCGGAGGCTGACGCGCCCGGGCGCCGTTCCAGGCCTGTGCAGGGCGGATCGGCAGCCGCCTGGCGGCGATCCAGGGCGGTGCGGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378895.9
ENST00000394901.7
CDS CCA 90 bp CCCTGGATCGCCGCCAGGCGGCTGCCGATCCGCCCTGCACAGGCCTaGAACGGCGCCCGGGCGCGTCAGCCTCCGAAGGCGGAGGCGGGC +
Preference number: 5 (lower is better)
Translates to: PWIAARRLPIRPAQA*NGARARQPPKAEAG
Trigger: GCCCGCCTCCGCCTTCGGAGGCTGACGCGCCCGGGCGCCGTTCCAGGCCTGTGCAGGGCGGATCGGCAGCCGCCTGGCGGCGATCCAGGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378895.9
CDS CCA 90 bp CCACTCTCCTGGCGGAGGTCGAAGGCAGCCGCCTCCCCGCGCTCCTaGCTGCGGCAGGCCAGCACCACGCGCGCTCCCCGGCGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: PLSWRRSKAAASPRS*LRQASTTRAPRRAS
Trigger: GCTGGCGCGCCGGGGAGCGCGCGTGGTGCTGGCCTGCCGCAGCCAGGAGCGCGGGGAGGCGGCTGCCTTCGACCTCCGCCAGGAGAGTGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378895.9
ENST00000394901.7
CDS GCA 90 bp TCTCCTGGCGGAGGTCGAAGGCAGCCGCCTCCCCGCGCTCCTGGCTaGGGCAGGCCAGCACCACGCGCGCTCCCCGGCGCGCCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: SPGGGRRQPPPRAPG*GRPAPRALPGAPAP
Trigger: TGGAGCTGGCGCGCCGGGGAGCGCGCGTGGTGCTGGCCTGCCGCAGCCAGGAGCGCGGGGAGGCGGCTGCCTTCGACCTCCGCCAGGAGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378895.9
ENST00000394901.7
CDS GCA 90 bp CGCGCGCTCCCCGGCGCGCCAGCTCCAGCGCCGTCATCTTTCCGATaGCGCTGTTGGCGCCTGCGGACCGCGGGCGGGAGCCGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: RALPGAPAPAPSSFR*RCWRLRTAGGSRAE
Trigger: CTCAGCTCGGCTCCCGCCCGCGGTCCGCAGGCGCCAACAGCGGCATCGGAAAGATGACGGCGCTGGAGCTGGCGCGCCGGGGAGCGCGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394901.7
CDS CCA 90 bp CCCGGCGCGCCAGCTCCAGCGCCGTCATCTTTCCGATGCCGCTGTTaGCGCCTGCGGACCGCGGGCGGGAGCCGAGCTGAGCTGAGCCCG +
Preference number: 5 (lower is better)
Translates to: PGAPAPAPSSFRCRC*RLRTAGGSRAELSP
Trigger: CGGGCTCAGCTCAGCTCGGCTCCCGCCCGCGGTCCGCAGGCGCCAACAGCGGCATCGGAAAGATGACGGCGCTGGAGCTGGCGCGCCGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394901.7
CDS CCA 90 bp CGGGTTCAGCATCCTCCCCAGGCCCAAGCCCTGCCAGCCTCTTGCTaGCCTCCCATAGCCGATGGGCTGCCCGGTCGTCTCGGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: RVQHPPQAQALPASC*PPIADGLPGRLGQL
Trigger: CAGCTGCCCGAGACGACCGGGCAGCCCATCGGCTATGGGAGGCCAGCAAGAGGCTGGCAGGGCTTGGGCCTGGGGAGGATGCTGAACCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS GCA 90 bp CATCGGGTTCAGCATCCTCCCCAGGCCCAAGCCCTGCCAGCCTCTTaGTGGCCTCCCATAGCCGATGGGCTGCCCGGTCGTCTCGGGCAG +
Preference number: 5 (lower is better)
Translates to: HRVQHPPQAQALPAS*WPPIADGLPGRLGQ
Trigger: CTGCCCGAGACGACCGGGCAGCCCATCGGCTATGGGAGGCCAGCAAGAGGCTGGCAGGGCTTGGGCCTGGGGAGGATGCTGAACCCGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS CCA 90 bp CCAGGCCCAAGCCCTGCCAGCCTCTTGCTGGCCTCCCATAGCCGATaGGCTGCCCGGTCGTCTCGGGCAGCTGGAGGCACCTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: PGPSPASLLLASHSR*AARSSRAAGGTSST
Trigger: TGTGGAAGAGGTGCCTCCAGCTGCCCGAGACGACCGGGCAGCCCATCGGCTATGGGAGGCCAGCAAGAGGCTGGCAGGGCTTGGGCCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CAA 90 bp GCAGTCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTACTCTGGGCACCCCCTCTaGGTGCCCGGAGCACCAGCC +
Preference number: 5 (lower is better)
Translates to: AVGPGLRPLGSDPRPSSYSGHPL*VPGAPA
Trigger: GGCTGGTGCTCCGGGCACCAAGAGGGGGTGCCCAGA...GTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGACTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS TCA 90 bp CCCGCAGCTCCTGCCGCCAGCCCACCACTGGGCGGTCCAGGCGTTTaGAGTCAAGACGTCCCCGACAGTGGGCAGCTGAGGCTACCACCA +
Preference number: 5 (lower is better)
Translates to: PAAPAASPPLGGPGV*SQDVPDSGQLRLPP
Trigger: TGGTGGTAGCCTCAGCTGCCCACTGTCGGGGACGTCTTGACTTCAAACGCCTGGACCGCCCAGTGGTGGGCTGGCGGCAGGAGCTGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CAA 90 bp CAGTCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTACTTCTGGGCACCCCCTCTaGGTGCCCGGAGCACCAGCC +
Preference number: 5 (lower is better)
Translates to: QSALASDPWVQIPGPPPTSGHPL*VPGAPA
Trigger: GGCTGGTGCTCCGGGCACCAAGAGGGGGTGCCCAGA...AGTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CAA 90 bp TCTTACGGCAGTCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCTTTCCGATGCCGCTGTaGGCGCCTGCGGACCGCGGG +
Preference number: 5 (lower is better)
Translates to: SYGSRPWPQTLGFRSQALFPMPL*APADRG
Trigger: CCCGCGGTCCGCAGGCGCCAACAGCGGCATCGGAAA...GAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGACTGCCGTAAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394901.7
CDS-3UTR CAA 90 bp GCAGTCGGCCCTGGCCTCAGACCCTTGGGTTCAGATCCCAGGCCCTCCTCCTACGTGGCCTCAAGCTGGTaGGCGAGCTCCCGGGCAAAC +
Preference number: 5 (lower is better)
Translates to: AVGPGLRPLGSDPRPSSYVASSW*ASSRAN
Trigger: GTTTGCCCGGGAGCTCGCCAACCAGCTTGAGGCCAC...GTAGGAGGAGGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGGGCCGACTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS CCA 90 bp ACCACTGGGCGGTCCAGGCGTTTGAAGTCAAGACGTCCCCGACAGTaGGCAGCTGAGGCTACCACCACCACGCGGCTAGGGGCACATGCC +
Preference number: 5 (lower is better)
Translates to: TTGRSRRLKSRRPRQ*AAEATTTTRLGAHA
Trigger: GGCATGTGCCCCTAGCCGCGTGGTGGTGGTAGCCTCAGCTGCCCACTGTCGGGGACGTCTTGACTTCAAACGCCTGGACCGCCCAGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CAA 90 bp AGCCCTGCATCCGCCCGGAAGGCGTCCCCTTACTCCCATGGGGCACCTCGATACGGGCGGTCCAGGCGTTaGAAGTCAAGACGTCCCCGA +
Preference number: 5 (lower is better)
Translates to: SPASARKASPYSHGAPRYGRSRR*KSRRPR
Trigger: TCGGGGACGTCTTGACTTCAAACGCCTGGACCGCCC...GTATCGAGGTGCCCCATGGGAGTAAGGGGACGCCTTCCGGGCGGATGCAGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS TCA 90 bp GCGGTCCAGGCGTTTGAAGTCAAGACGTCCCCGACAGTGGGCAGCTaGGGCTACCACCACCACGCGGCTAGGGGCACATGCCTTCAGGCA +
Preference number: 5 (lower is better)
Translates to: AVQAFEVKTSPTVGS*GYHHHAARGTCLQA
Trigger: TGCCTGAAGGCATGTGCCCCTAGCCGCGTGGTGGTGGTAGCCTCAGCTGCCCACTGTCGGGGACGTCTTGACTTCAAACGCCTGGACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
ENST00000581759.1
CDS GCA 90 bp GAGCTCCCGGGCAAACAGTACATTAGCCAGCTTAGTGTCAGCATATaGCCGCAGCTCCTGCCGCCAGCCCACCACTGGGCGGTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: ELPGKQYISQLSVSI*PQLLPPAHHWAVQA
Trigger: CGCCTGGACCGCCCAGTGGTGGGCTGGCGGCAGGAGCTGCGGGCATATGCTGACACTAAGCTGGCTAATGTACTGTTTGCCCGGGAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS CCA 90 bp CTTAGTGTCAGCATATGCCCGCAGCTCCTGCCGCCAGCCCACCACTaGGCGGTCCAGGCGTTTGAAGTCAAGACGTCCCCGACAGTGGGC +
Preference number: 5 (lower is better)
Translates to: LSVSICPQLLPPAHH*AVQAFEVKTSPTVG
Trigger: GCCCACTGTCGGGGACGTCTTGACTTCAAACGCCTGGACCGCCCAGTGGTGGGCTGGCGGCAGGAGCTGCGGGCATATGCTGACACTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS CCA 90 bp TGTCTGGGCACCCCCTCTTGGTGCCCGGAGCACCAGCCAAGCCAATaGGCGCAAAAGTGGGCGCAGCCATCCAGGAACATGGCGCAGGAA +
Preference number: 5 (lower is better)
Translates to: CLGTPSWCPEHQPSQ*AQKWAQPSRNMAQE
Trigger: TTCCTGCGCCATGTTCCTGGATGGCTGCGCCCACTTTTGCGCCCATTGGCTTGGCTGGTGCTCCGGGCACCAAGAGGGGGTGCCCAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CAA 90 bp AGCCCTGCATCCGCCCGGAAGGCGTCCCCTTACTCCCATGGGGCACCTCGATACTGTCCAGGGCACAGCTaGGGGCCCCAGAAAGTAACC +
Preference number: 5 (lower is better)
Translates to: SPASARKASPYSHGAPRYCPGHS*GPQKVT
Trigger: GGTTACTTTCTGGGGCCCCAAGCTGTGCCCTGGACA...GTATCGAGGTGCCCCATGGGAGTAAGGGGACGCCTTCCGGGCGGATGCAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS CCA 90 bp AGCCAAGCCAATGGGCGCAAAAGTGGGCGCAGCCATCCAGGAACATaGCGCAGGAACAGCTCCGAGTTCACAGGCCCTGGGTGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: SQANGRKSGRSHPGT*RRNSSEFTGPGWAA
Trigger: TGCAGCCCACCCAGGGCCTGTGAACTCGGAGCTGTTCCTGCGCCATGTTCCTGGATGGCTGCGCCCACTTTTGCGCCCATTGGCTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS CCA 90 bp CCCTCTTGGTGCCCGGAGCACCAGCCAAGCCAATGGGCGCAAAAGTaGGCGCAGCCATCCAGGAACATGGCGCAGGAACAGCTCCGAGTT +
Preference number: 5 (lower is better)
Translates to: PSWCPEHQPSQWAQK*AQPSRNMAQEQLRV
Trigger: AACTCGGAGCTGTTCCTGCGCCATGTTCCTGGATGGCTGCGCCCACTTTTGCGCCCATTGGCTTGGCTGGTGCTCCGGGCACCAAGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CAA 90 bp CAGATGACCCCAGCCCTGCATCCGCCCGGAAGGCGTCCCCTTACTCCCATGGGGTGGCAGTGCATCACATaGCAAACTCCCTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: QMTPALHPPGRRPLTPMGWQCIT*QTPCLC
Trigger: GCAGAGGCAGGGAGTTTGCAATGTGATGCACTGCCA...CCCCATGGGAGTAAGGGGACGCCTTCCGGGCGGATGCAGGGCTGGGGTCATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS CCA 90 bp TGGGCTGCCCGGTCGTCTCGGGCAGCTGGAGGCACCTCTTCCACATaGCAGTTGGCAAAATATCTCCCACTGAGGGGCTCGATGCCCTCT +
Preference number: 5 (lower is better)
Translates to: WAARSSRAAGGTSST*QLAKYLPLRGSMPS
Trigger: AGAGGGCATCGAGCCCCTCAGTGGGAGATATTTTGCCAACTGCCATGTGGAAGAGGTGCCTCCAGCTGCCCGAGACGACCGGGCAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CAA 90 bp CAGGGCATGGCCTCGCACACATCCGAGGTTTTCAAGGACCATGAAGTGCCATGGGTGGCCTCAAGCTGGTaGGCGAGCTCCCGGGCAAAC +
Preference number: 5 (lower is better)
Translates to: QGMASHTSEVFKDHEVPWVASSW*ASSRAN
Trigger: GTTTGCCCGGGAGCTCGCCAACCAGCTTGAGGCCAC...CCATGGCACTTCATGGTCCTTGAAAACCTCGGATGTGTGCGAGGCCATGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CAA 90 bp CAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGTCTGGGCACCCCCTCTaGGTGCCCGGAGCACCAGCC +
Preference number: 5 (lower is better)
Translates to: QKVTTEVKITNPSVSRAWSGHPL*VPGAPA
Trigger: GGCTGGTGCTCCGGGCACCAAGAGGGGGTGCCCAGA...CCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CAA 90 bp GGGGCCCCAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGCCTGGCCTCAGACCCTaGGGTTCAGATCCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: GAPESNHGGQDHKPVSVQPGLRP*GSDPRP
Trigger: GGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGG...CTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTGGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS CCA 90 bp GCCACAGGAACTGATACCGGCATTGTGGATGAGGATGTCCAACCGTaGCTCAGAGCTCAGAAAGGCAGTGGCAAAGGCCCGCACCGAGGC +
Preference number: 5 (lower is better)
Translates to: ATGTDTGIVDEDVQP*LRAQKGSGKGPHRG
Trigger: GCCTCGGTGCGGGCCTTTGCCACTGCCTTTCTGAGCTCTGAGCCACGGTTGGACATCCTCATCCACAATGCCGGTATCAGTTCCTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000581759.1
CDS-3UTR CAA 90 bp ATCACAAACCCGTCAGTGTCCAGGGCATGGCCTCGCACACATCCGAGGTTTTCAAGCCCTGCCAGCCTCTaGCTGGCCTCCCATAGCCGA +
Preference number: 5 (lower is better)
Translates to: ITNPSVSRAWPRTHPRFSSPASL*LASHSR
Trigger: TCGGCTATGGGAGGCCAGCAAGAGGCTGGCAGGGCT...TGAAAACCTCGGATGTGTGCGAGGCCATGCCCTGGACACTGACGGGTTTGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CAA 90 bp GTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGGGCATGGCCTCGCTGTCCAGGGCACAGCTaGGGGCCCCAGAAAGTAACC +
Preference number: 5 (lower is better)
Translates to: VTTEVKITNPSVSRAWPRCPGHS*GPQKVT
Trigger: GGTTACTTTCTGGGGCCCCAAGCTGTGCCCTGGACA...GCGAGGCCATGCCCTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS GCA 90 bp AACAGTACATTAGCCAGCTTAGTGTCAGCATATGCCCGCAGCTCCTaGCGCCAGCCCACCACTGGGCGGTCCAGGCGTTTGAAGTCAAGA +
Preference number: 5 (lower is better)
Translates to: NSTLASLVSAYARSS*RQPTTGRSRRLKSR
Trigger: TCTTGACTTCAAACGCCTGGACCGCCCAGTGGTGGGCTGGCGGCAGGAGCTGCGGGCATATGCTGACACTAAGCTGGCTAATGTACTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CAA 90 bp GCACAGCTTGGGGCCCCAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGGGCTGGGGTAAGGTaGAGAAACTGTGGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: AQLGAPESNHGGQDHKPVRAGVR*RNCGLL
Trigger: GAGGAGCCCACAGTTTCTCAACCTTACCCCAGCCCT...GACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTGGGGCCCCAAGCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS GCA 90 bp AGGGCATGGCCTCGCACACATCCGAGGTTTTCAAGGACCATGAAGTaGCATGGCAAGCATCCTGGCCTGAGGGTTAGGAGAGCTGGATCT +
Preference number: 5 (lower is better)
Translates to: RAWPRTHPRFSRTMK*HGKHPGLRVRRAGS
Trigger: AGATCCAGCTCTCCTAACCCTCAGGCCAGGATGCTTGCCATGGCACTTCATGGTCCTTGAAAACCTCGGATGTGTGCGAGGCCATGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CAA 90 bp GAAGCACAGTGTCTAGCATACCCCTATCTCTCCATCTGGGGTTACTGTCACTCTAGCCCTGCCAGCCTCTaGCTGGCCTCCCATAGCCGA +
Preference number: 5 (lower is better)
Translates to: EAQCLAYPYLSIWGYCHSSPASL*LASHSR
Trigger: TCGGCTATGGGAGGCCAGCAAGAGGCTGGCAGGGCT...AGAGTGACAGTAACCCCAGATGGAGAGATAGGGGTATGCTAGACACTGTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CAA 90 bp GGGGCCCCAGAAAGTAACCACGGAGGTCAAGATCACAAACCCGTCAGTGTCCAGTGGCAGTGCATCACATaGCAAACTCCCTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: GAPESNHGGQDHKPVSVQWQCIT*QTPCLC
Trigger: GCAGAGGCAGGGAGTTTGCAATGTGATGCACTGCCA...CTGGACACTGACGGGTTTGTGATCTTGACCTCCGTGGTTACTTTCTGGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CAA 90 bp CCGAGAAGCACAGTGTCTAGCATACCCCTATCTCTCCATCTGGGGTTACTGTCAAGGGCTGGGGTAAGGTaGAGAAACTGTGGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: PRSTVSSIPLSLHLGLLSRAGVR*RNCGLL
Trigger: GAGGAGCCCACAGTTTCTCAACCTTACCCCAGCCCT...TGACAGTAACCCCAGATGGAGAGATAGGGGTATGCTAGACACTGTGCTTCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CAA 90 bp GAAGCACAGTGTCTAGCATACCCCTATCTCTCCATCTGGGGTTACTGTCACTCTTGTCCAGGGCACAGCTaGGGGCCCCAGAAAGTAACC +
Preference number: 5 (lower is better)
Translates to: EAQCLAYPYLSIWGYCHSCPGHS*GPQKVT
Trigger: GGTTACTTTCTGGGGCCCCAAGCTGTGCCCTGGACA...AGAGTGACAGTAACCCCAGATGGAGAGATAGGGGTATGCTAGACACTGTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CAA 90 bp CTACATCCAAATTTCCGAGAAGCACAGTGTCTAGCATACCCCTATCTCTCCATCCCTGGCCTCAGACCCTaGGGTTCAGATCCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: LHPNFREAQCLAYPYLSIPGLRP*GSDPRP
Trigger: GGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGG...GATGGAGAGATAGGGGTATGCTAGACACTGTGCTTCTCGGAAATTTGGATGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CAA 90 bp ATCACAAACCCGTCAGTGTCCAGGGCATGGCCTCGCACACATCCGAGGTTTTCAGAACTGATACCGGCATaGTGGATGAGGATGTCCAAC +
Preference number: 5 (lower is better)
Translates to: ITNPSVSRAWPRTHPRFSELIPA*WMRMSN
Trigger: GTTGGACATCCTCATCCACAATGCCGGTATCAGTTC...TGAAAACCTCGGATGTGTGCGAGGCCATGCCCTGGACACTGACGGGTTTGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378895.9
ENST00000394901.7
CDS TCA 90 bp CTCAACTTTAGCCTGAATTCGGTGCGTCATCTTAGACAAATCTGGTaGGCTCTGAGGGCTGGGGTAAGGTTGAGAAACTGTGGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: LNFSLNSVRHLRQIW*ALRAGVRLRNCGLL
Trigger: GAGGAGCCCACAGTTTCTCAACCTTACCCCAGCCCTCAGAGCTCACCAGATTTGTCTAAGATGACGCACCGAATTCAGGCTAAAGTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CAA 90 bp TTTAACTACCTAGCTAGACGGTTGCAAAGGGATCAGTTCACTAATTCTCAATGTTTTCCGATGCCGCTGTaGGCGCCCGTGACCACGGCC +
Preference number: 5 (lower is better)
Translates to: FNYLARRLQRDQFTNSQCFPMPL*APVTTA
Trigger: GGCCGTGGTCACGGGCGCCAACAGCGGCATCGGAAA...ACATTGAGAATTAGTGAACTGATCCCTTTGCAACCGTCTAGCTAGGTAGTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378895.9
CDS-3UTR CAA 90 bp GAAGCACAGTGTCTAGCATACCCCTATCTCTCCATCTGGGGTTACTGTCACTCTGAACTGATACCGGCATaGTGGATGAGGATGTCCAAC +
Preference number: 5 (lower is better)
Translates to: EAQCLAYPYLSIWGYCHSELIPA*WMRMSN
Trigger: GTTGGACATCCTCATCCACAATGCCGGTATCAGTTC...AGAGTGACAGTAACCCCAGATGGAGAGATAGGGGTATGCTAGACACTGTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378895.9
ENST00000394901.7
CDS-3UTR CAA 90 bp TTTAACTACCTAGCTAGACGGTTGCAAAGGGATCAGTTCACTAATTCTCAATGTGTGGCCTCAAGCTGGTaGGCGAGCTCCCGGGCAAAC +
Preference number: 5 (lower is better)
Translates to: FNYLARRLQRDQFTNSQCVASSW*ASSRAN
Trigger: GTTTGCCCGGGAGCTCGCCAACCAGCTTGAGGCCAC...ACATTGAGAATTAGTGAACTGATCCCTTTGCAACCGTCTAGCTAGGTAGTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CAA 90 bp TTTAACTACCTAGCTAGACGGTTGCAAAGGGATCAGTTCACTAATTCTCAATGTAGCCCTGCCAGCCTCTaGCTGGCCTCCCATAGCCGA +
Preference number: 5 (lower is better)
Translates to: FNYLARRLQRDQFTNSQCSPASL*LASHSR
Trigger: TCGGCTATGGGAGGCCAGCAAGAGGCTGGCAGGGCT...ACATTGAGAATTAGTGAACTGATCCCTTTGCAACCGTCTAGCTAGGTAGTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CAA 90 bp TTTAACTACCTAGCTAGACGGTTGCAAAGGGATCAGTTCACTAATTCTCAATGTCCTGGCCTCAGACCCTaGGGTTCAGATCCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: FNYLARRLQRDQFTNSQCPGLRP*GSDPRP
Trigger: GGGCCTGGGATCTGAACCCAAGGGTCTGAGGCCAGG...ACATTGAGAATTAGTGAACTGATCCCTTTGCAACCGTCTAGCTAGGTAGTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CAA 90 bp TTTAACTACCTAGCTAGACGGTTGCAAAGGGATCAGTTCACTAATTCTCAATGTGGGCGGTCCAGGCGTTaGAAGTCAAGACGTCCCCGA +
Preference number: 5 (lower is better)
Translates to: FNYLARRLQRDQFTNSQCGRSRR*KSRRPR
Trigger: TCGGGGACGTCTTGACTTCAAACGCCTGGACCGCCC...ACATTGAGAATTAGTGAACTGATCCCTTTGCAACCGTCTAGCTAGGTAGTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CAA 90 bp TGCAAAGGGATCAGTTCACTAATTCTCAATGTTGGCAGTGCATCACATTGCAAAAGGGCTGGGGTAAGGTaGAGAAACTGTGGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: CKGISSLILNVGSASHCKRAGVR*RNCGLL
Trigger: GAGGAGCCCACAGTTTCTCAACCTTACCCCAGCCCT...TTTGCAATGTGATGCACTGCCAACATTGAGAATTAGTGAACTGATCCCTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS-3UTR CAA 90 bp CAAAGGGATCAGTTCACTAATTCTCAATGTTGGCAGTGCATCACATTGCAAACTTGGCAGTGCATCACATaGCAAACTCCCTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: QRDQFTNSQCWQCITLQTWQCIT*QTPCLC
Trigger: GCAGAGGCAGGGAGTTTGCAATGTGATGCACTGCCA...AGTTTGCAATGTGATGCACTGCCAACATTGAGAATTAGTGAACTGATCCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS GCA 90 bp TTCCATCCAGACTGCTTGTTCACCCCACATCCCAGATTTTGTTCATaGTGTGTCCCATGTCTGAAACAATTCTCAGTCTCTCTCCATCTT +
Preference number: 5 (lower is better)
Translates to: FHPDCLFTPHPRFCS*CVPCLKQFSVSLHL
Trigger: AAGATGGAGAGAGACTGAGAATTGTTTCAGACATGGGACACAGCATGAACAAAATCTGGGATGTGGGGTGAACAAGCAGTCTGGATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581974.1
CDS GCA 90 bp ACCTTGGGCAAGATACTTAATCTCTCTGGGTCTCAGTTCTCTCACTaGGTAAAGGGAATAATAATAACAACAGTCCCAATCTCACTGAGC +
Preference number: 5 (lower is better)
Translates to: TLGKILNLSGSQFSH*VKGIIITTVPISLS
Trigger: GCTCAGTGAGATTGGGACTGTTGTTATTATTATTCCCTTTACGCAGTGAGAGAACTGAGACCCAGAGAGATTAAGTATCTTGCCCAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581759.1
CDS GCA 72 bp CAGGCCCCGCACCGCCCTGGATCGCCGCCAGGCGGCTaGCGATCCGCCCTGCACAGGCCTGGAACGGCGCCC +
Preference number: 6 (lower is better)
Translates to: QAPHRPGSPPGG*RSALHRPGTAP
Trigger: GGGCGCCGTTCCAGGCCTGTGCAGGGCGGATCGGCAGCCGCCTGGCGGCGATCCAGGGCGGTGCGGGGCCTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378895.9
ENST00000394901.7
CDS CCA 72 bp TGGCGGAGGTCGAAGGCAGCCGCCTCCCCGCGCTCCTaGCTGCGGCAGGCCAGCACCACGCGCGCTCCCCGG +
Preference number: 6 (lower is better)
Translates to: WRRSKAAASPRS*LRQASTTRAPR
Trigger: CCGGGGAGCGCGCGTGGTGCTGGCCTGCCGCAGCCAGGAGCGCGGGGAGGCGGCTGCCTTCGACCTCCGCCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378895.9
ENST00000394901.7
CDS GCA 72 bp CCCGGCGCGCCAGCTCCAGCGCCGTCATCTTTCCGATaGCGCTGTTGGCGCCTGCGGACCGCGGGCGGGAGC +
Preference number: 6 (lower is better)
Translates to: PGAPAPAPSSFR*RCWRLRTAGGS
Trigger: GCTCCCGCCCGCGGTCCGCAGGCGCCAACAGCGGCATCGGAAAGATGACGGCGCTGGAGCTGGCGCGCCGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394901.7
CDS CAA 90 bp GCCCGCAGCTCCTGCCGCCAGCCCACCACTGGGCGGTCCAGGCGTTaGAAGTCAAGACGTCCCCGACAGTGGGCAGCTGAGGCTACCACC +
Preference number: 6 (lower is better)
Translates to: ARSSCRQPTTGRSRR*KSRRPRQWAAEATT
Trigger: GGTGGTAGCCTCAGCTGCCCACTGTCGGGGACGTCTTGACTTCAAACGCCTGGACCGCCCAGTGGTGGGCTGGCGGCAGGAGCTGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS CAA 90 bp TCATCGGGTTCAGCATCCTCCCCAGGCCCAAGCCCTGCCAGCCTCTaGCTGGCCTCCCATAGCCGATGGGCTGCCCGGTCGTCTCGGGCA +
Preference number: 6 (lower is better)
Translates to: SSGSASSPGPSPASL*LASHSRWAARSSRA
Trigger: TGCCCGAGACGACCGGGCAGCCCATCGGCTATGGGAGGCCAGCAAGAGGCTGGCAGGGCTTGGGCCTGGGGAGGATGCTGAACCCGATGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS TCA 72 bp CCTGCCGCCAGCCCACCACTGGGCGGTCCAGGCGTTTaGAGTCAAGACGTCCCCGACAGTGGGCAGCTGAGG +
Preference number: 6 (lower is better)
Translates to: PAASPPLGGPGV*SQDVPDSGQLR
Trigger: CCTCAGCTGCCCACTGTCGGGGACGTCTTGACTTCAAACGCCTGGACCGCCCAGTGGTGGGCTGGCGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS CCA 72 bp AGCATATGCCCGCAGCTCCTGCCGCCAGCCCACCACTaGGCGGTCCAGGCGTTTGAAGTCAAGACGTCCCCG +
Preference number: 6 (lower is better)
Translates to: SICPQLLPPAHH*AVQAFEVKTSP
Trigger: CGGGGACGTCTTGACTTCAAACGCCTGGACCGCCCAGTGGTGGGCTGGCGGCAGGAGCTGCGGGCATATGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS CAA 72 bp TCCTGCCGCCAGCCCACCACTGGGCGGTCCAGGCGTTaGAAGTCAAGACGTCCCCGACAGTGGGCAGCTGAG +
Preference number: 6 (lower is better)
Translates to: SCRQPTTGRSRR*KSRRPRQWAAE
Trigger: CTCAGCTGCCCACTGTCGGGGACGTCTTGACTTCAAACGCCTGGACCGCCCAGTGGTGGGCTGGCGGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS TCA 72 bp GCGTTTGAAGTCAAGACGTCCCCGACAGTGGGCAGCTaGGGCTACCACCACCACGCGGCTAGGGGCACATGC +
Preference number: 6 (lower is better)
Translates to: AFEVKTSPTVGS*GYHHHAARGTC
Trigger: GCATGTGCCCCTAGCCGCGTGGTGGTGGTAGCCTCAGCTGCCCACTGTCGGGGACGTCTTGACTTCAAACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
ENST00000581759.1
CDS GCA 72 bp TTAGCCAGCTTAGTGTCAGCATATGCCCGCAGCTCCTaGCGCCAGCCCACCACTGGGCGGTCCAGGCGTTTG +
Preference number: 6 (lower is better)
Translates to: LASLVSAYARSS*RQPTTGRSRRL
Trigger: CAAACGCCTGGACCGCCCAGTGGTGGGCTGGCGGCAGGAGCTGCGGGCATATGCTGACACTAAGCTGGCTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS CCA 72 bp TGCCCGGAGCACCAGCCAAGCCAATGGGCGCAAAAGTaGGCGCAGCCATCCAGGAACATGGCGCAGGAACAG +
Preference number: 6 (lower is better)
Translates to: CPEHQPSQWAQK*AQPSRNMAQEQ
Trigger: CTGTTCCTGCGCCATGTTCCTGGATGGCTGCGCCCACTTTTGCGCCCATTGGCTTGGCTGGTGCTCCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS CCA 72 bp ACCCCCTCTTGGTGCCCGGAGCACCAGCCAAGCCAATaGGCGCAAAAGTGGGCGCAGCCATCCAGGAACATG +
Preference number: 6 (lower is better)
Translates to: TPSWCPEHQPSQ*AQKWAQPSRNM
Trigger: CATGTTCCTGGATGGCTGCGCCCACTTTTGCGCCCATTGGCTTGGCTGGTGCTCCGGGCACCAAGAGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS CAA 72 bp GTAGAGCACAATACAGGGGTGTCTGGGCACCCCCTCTaGGTGCCCGGAGCACCAGCCAAGCCAATGGGCGCA +
Preference number: 6 (lower is better)
Translates to: VEHNTGVSGHPL*VPGAPAKPMGA
Trigger: TGCGCCCATTGGCTTGGCTGGTGCTCCGGGCACCAAGAGGGGGTGCCCAGACACCCCTGTATTGTGCTCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS CCA 72 bp GGATGTCCAACCGTGGCTCAGAGCTCAGAAAGGCAGTaGCAAAGGCCCGCACCGAGGCCAGACTGGCCAAGT +
Preference number: 6 (lower is better)
Translates to: GCPTVAQSSERQ*QRPAPRPDWPS
Trigger: ACTTGGCCAGTCTGGCCTCGGTGCGGGCCTTTGCCACTGCCTTTCTGAGCTCTGAGCCACGGTTGGACATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000581759.1
CDS CCA 72 bp AATGGGCGCAAAAGTGGGCGCAGCCATCCAGGAACATaGCGCAGGAACAGCTCCGAGTTCACAGGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: NGRKSGRSHPGT*RRNSSEFTGPG
Trigger: CCCAGGGCCTGTGAACTCGGAGCTGTTCCTGCGCCATGTTCCTGGATGGCTGCGCCCACTTTTGCGCCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS CCA 72 bp AATGGGCGCAAAAGTGGGCGCAGCCATCCAGGAACATaGCGCAGGAACAGCTCCGAGTTCACAGGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: NGRKSGRSHPGT*RRNSSEFTGPG
Trigger: GCCTGGGCCTGTGAACTCGGAGCTGTTCCTGCGCCATGTTCCTGGATGGCTGCGCCCACTTTTGCGCCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581974.1
CDS CCA 72 bp TCGATGCCCTCTTGTAGAGCACAATACAGGGGTGTCTaGGCACCCCCTCTTGGTGCCCGGAGCACCAGCCAA +
Preference number: 6 (lower is better)
Translates to: SMPSCRAQYRGV*APPLGARSTSQ
Trigger: TTGGCTGGTGCTCCGGGCACCAAGAGGGGGTGCCCAGACACCCCTGTATTGTGCTCTACAAGAGGGCATCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS CCA 72 bp CGGTCGTCTCGGGCAGCTGGAGGCACCTCTTCCACATaGCAGTTGGCAAAATATCTCCCACTGAGGGGCTCG +
Preference number: 6 (lower is better)
Translates to: RSSRAAGGTSST*QLAKYLPLRGS
Trigger: CGAGCCCCTCAGTGGGAGATATTTTGCCAACTGCCATGTGGAAGAGGTGCCTCCAGCTGCCCGAGACGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS CAA 90 bp GCCCGGTCGTCTCGGGCAGCTGGAGGCACCTCTTCCACATGGCAGTaGGCAAAATATCTCCCACTGAGGGGCTCGATGCCCTCTTGTAGA +
Preference number: 6 (lower is better)
Translates to: ARSSRAAGGTSSTWQ*AKYLPLRGSMPSCR
Trigger: TCTACAAGAGGGCATCGAGCCCCTCAGTGGGAGATATTTTGCCAACTGCCATGTGGAAGAGGTGCCTCCAGCTGCCCGAGACGACCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS CAA 72 bp TCTCGGGCAGCTGGAGGCACCTCTTCCACATGGCAGTaGGCAAAATATCTCCCACTGAGGGGCTCGATGCCC +
Preference number: 6 (lower is better)
Translates to: SRAAGGTSSTWQ*AKYLPLRGSMP
Trigger: GGGCATCGAGCCCCTCAGTGGGAGATATTTTGCCAACTGCCATGTGGAAGAGGTGCCTCCAGCTGCCCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS CCA 72 bp ACTGATACCGGCATTGTGGATGAGGATGTCCAACCGTaGCTCAGAGCTCAGAAAGGCAGTGGCAAAGGCCCG +
Preference number: 6 (lower is better)
Translates to: TDTGIVDEDVQP*LRAQKGSGKGP
Trigger: CGGGCCTTTGCCACTGCCTTTCTGAGCTCTGAGCCACGGTTGGACATCCTCATCCACAATGCCGGTATCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000581759.1
CDS GCA 72 bp CCTCGCACACATCCGAGGTTTTCAAGGACCATGAAGTaGCATGGCAAGCATCCTGGCCTGAGGGTTAGGAGA +
Preference number: 6 (lower is better)
Translates to: PRTHPRFSRTMK*HGKHPGLRVRR
Trigger: TCTCCTAACCCTCAGGCCAGGATGCTTGCCATGGCACTTCATGGTCCTTGAAAACCTCGGATGTGTGCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS TCA 72 bp AGCCTGAATTCGGTGCGTCATCTTAGACAAATCTGGTaGGCTCTGAGGGCTGGGGTAAGGTTGAGAAACTGT +
Preference number: 6 (lower is better)
Translates to: SLNSVRHLRQIW*ALRAGVRLRNC
Trigger: ACAGTTTCTCAACCTTACCCCAGCCCTCAGAGCTCACCAGATTTGTCTAAGATGACGCACCGAATTCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378895.9
ENST00000394901.7
ENST00000426464.2
CDS GCA 72 bp ATTTCCTGCATGAAGCCTCTTCGCTTCCATCCAGACTaGTTGTTCACCCCACATCCCAGATTTTGTTCATGC +
Preference number: 6 (lower is better)
Translates to: ISCMKPLRFHPD*LFTPHPRFCSC
Trigger: GCATGAACAAAATCTGGGATGTGGGGTGAACAAGCAGTCTGGATGGAAGCGAAGAGGCTTCATGCAGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581974.1
CDS CAA 90 bp TCTTCGCTTCCATCCAGACTGCTTGTTCACCCCACATCCCAGATTTaGTTCATGCTGTGTCCCATGTCTGAAACAATTCTCAGTCTCTCT +
Preference number: 6 (lower is better)
Translates to: SSLPSRLLVHPTSQI*FMLCPMSETILSLS
Trigger: AGAGAGACTGAGAATTGTTTCAGACATGGGACACAGCATGAACAAAATCTGGGATGTGGGGTGAACAAGCAGTCTGGATGGAAGCGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581974.1
CDS CAA 72 bp CGTGTAAAATACACTCTAGCAGCACTGGGTAGGTACTaGCTATTATTATTATCACCTCCTTTCCCCATTACC +
Preference number: 6 (lower is better)
Translates to: RVKYTLAALGRY*LLLLSPPFPIT
Trigger: GGTAATGGGGAAAGGAGGTGATAATAATAATAGCAAGTACCTACCCAGTGCTGCTAGAGTGTATTTTACACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581759.1