RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DHODH (Homo sapiens)

Ensembl gene IDs: ENSG00000102967

Ensembl transcript IDs: ENST00000219240.9, ENST00000571288.6, ENST00000571392.1, ENST00000572003.5, ENST00000572887.5, ENST00000573843.1, ENST00000573922.5, ENST00000574309.5, ENST00000576145.1

Found 461 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCAGAGAGAATGAGGAGGGTGTCCAGAGTATGTGCGCTGGCACCTaGCGTGGCATGTCGGAGCCCAGGCTGAGGAAAGTGACCCCGCAG +
Preference number: 1 (lower is better)
Translates to: PRENEEGVQSMCAGT*RGMSEPRLRKVTPQ
Trigger: CTGCGGGGTCACTTTCCTCAGCCTGGGCTCCGACATGCCACGTCAGGTGCCAGCGCACATACTCTGGACACCCTCCTCATTCTCTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR GCA 90 bp ATGCCAGCCCCTCAGCCCAGCTGTCACGCCCCTTGGACCCTGCTCTaGACCGACACCAGAACGAAGGCACAGGCACATTCACAAGGTGTT +
Preference number: 1 (lower is better)
Translates to: MPAPQPSCHAPWTLL*TDTRTKAQAHSQGV
Trigger: AACACCTTGTGAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCGTGACAGCTGGGCTGAGGGGCTGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR GCA 90 bp GAAACATGCCAGCCCCTCAGCCCAGCTGTCACGCCCCTTGGACCCTaGTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCACAAG +
Preference number: 1 (lower is better)
Translates to: ETCQPLSPAVTPLGP*SAPTPERRHRHIHK
Trigger: CTTGTGAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCGTGACAGCTGGGCTGAGGGGCTGGCATGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR CCA 90 bp GGCAGCTTTCAGGTCCTGCTCTCAGATGTGGCGGTGAAACTGGTCTaGCACCAGGCCAGGGCATCTGAATATTCCAAGTGCACCCCCGGG +
Preference number: 1 (lower is better)
Translates to: GSFQVLLSDVAVKLV*HQARASEYSKCTPG
Trigger: CCCGGGGGTGCACTTGGAATATTCAGATGCCCTGGCCTGGTGCCAGACCAGTTTCACCGCCACATCTGAGAGCAGGACCTGAAAGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571288.6
3UTR CCA 90 bp AGGAGACTGGTAGGCAAGATGTGTAGGGGCCTTCCTCCAGGACCGTaGTTCTCAGCTCCAGCTGCACCACAAAGGCCCCTGGCAGCTTTC +
Preference number: 1 (lower is better)
Translates to: RRLVGKMCRGLPPGP*FSAPAAPQRPLAAF
Trigger: GAAAGCTGCCAGGGGCCTTTGTGGTGCAGCTGGAGCTGAGAACCACGGTCCTGGAGGAAGGCCCCTACACATCTTGCCTACCAGTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571288.6
3UTR CCA 90 bp GTCAAGTTCCTGGGAAGCCCACTGCAGATGCAGATAGCAGAGGCCTaGATGGACCTGCAGTATCTTGGCAGGGCCTATGGCAAACCAGAA +
Preference number: 1 (lower is better)
Translates to: VKFLGSPLQMQIAEA*MDLQYLGRAYGKPE
Trigger: TTCTGGTTTGCCATAGGCCCTGCCAAGATACTGCAGGTCCATCCAGGCCTCTGCTATCTGCATCTGCAGTGGGCTTCCCAGGAACTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR TCA 90 bp CAGAGGGAGACGCGGTCATCATCAGTCTCCCAGGATTCCCAGCATTaGGAGCTGCTCTGGTGTCTGAGTGTGGCTTCCAGCATTAAGAAA +
Preference number: 1 (lower is better)
Translates to: QRETRSSSVSQDSQH*ELLWCLSVASSIKK
Trigger: TTTCTTAATGCTGGAAGCCACACTCAGACACCAGAGCAGCTCTCAATGCTGGGAATCCTGGGAGACTGATGATGACCGCGTCTCCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR CCA 90 bp GGAGAAGCAGAAGGCAATGAGCCGGCTTTTAGAGCAGCCAAGGCTTaGTCCATGGCAGAGCCATTCAGCACAACATGCTCTATGACCACA +
Preference number: 1 (lower is better)
Translates to: GEAEGNEPAFRAAKA*SMAEPFSTTCSMTT
Trigger: TGTGGTCATAGAGCATGTTGTGCTGAATGGCTCTGCCATGGACCAAGCCTTGGCTGCTCTAAAAGCCGGCTCATTGCCTTCTGCTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR TCA 90 bp TGGTCCTCAGGGAGGCGGAAGACTCTGGGTCTAGGGTTTCCTTCCTaGGGTTTTGGAGTCACACTTCCTATCTCAACAAAACCAAAGCCC +
Preference number: 1 (lower is better)
Translates to: WSSGRRKTLGLGFPS*GFGVTLPISTKPKP
Trigger: GGGCTTTGGTTTTGTTGAGATAGGAAGTGTGACTCCAAAACCTCAGGAAGGAAACCCTAGACCCAGAGTCTTCCGCCTCCCTGAGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571288.6
3UTR CCA 90 bp TCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATAGGAGCAACTTaGCTCTATCTATCAGAATGTGAAACATGCCAGCCCCTCAGCCCA +
Preference number: 1 (lower is better)
Translates to: STVGNGQLENLIGAT*LYLSECETCQPLSP
Trigger: TGGGCTGAGGGGCTGGCATGTTTCACATTCTGATAGATAGAGCCAAGTTGCTCCTATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR GCA 90 bp AGCATGTGGTTCCTTTTGCCCATTCCCATTTCTCCTTCAGTGCACTaGTCTTCCTGGAGTAAGGAACGAATCCGGAGAAGCAGAAGGCAA +
Preference number: 1 (lower is better)
Translates to: SMWFLLPIPISPSVH*SSWSKERIRRSRRQ
Trigger: TTGCCTTCTGCTTCTCCGGATTCGTTCCTTACTCCAGGAAGAGCAGTGCACTGAAGGAGAAATGGGAATGGGCAAAAGGAACCACATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR CCA 90 bp AGGGGAAAAGTCTGGGAGGACAGACAGAAAGGCATGTCTGCAGAGTaGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTA +
Preference number: 1 (lower is better)
Translates to: RGKVWEDRQKGMSAE*GEEEQECLHFKSAV
Trigger: TACAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACATGCCTTTCTGTCTGTCCTCCCAGACTTTTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR TCA 90 bp AAAAGTCTGGGAGGACAGACAGAAAGGCATGTCTGCAGAGTGGGGTaGGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTACCGTT +
Preference number: 1 (lower is better)
Translates to: KSLGGQTERHVCRVG*GGTGMFTLQECCTV
Trigger: AACGGTACAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACATGCCTTTCTGTCTGTCCTCCCAGACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR CCA 90 bp AGGGAGGCGGAAGACTCTGGGTCTAGGGTTTCCTTCCTGAGGTTTTaGAGTCACACTTCCTATCTCAACAAAACCAAAGCCCATCTTATA +
Preference number: 1 (lower is better)
Translates to: REAEDSGSRVSFLRF*SHTSYLNKTKAHLI
Trigger: TATAAGATGGGCTTTGGTTTTGTTGAGATAGGAAGTGTGACTCCAAAACCTCAGGAAGGAAACCCTAGACCCAGAGTCTTCCGCCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571288.6
3UTR GCA 90 bp CATCTTATAAAGTCCGTCCACGGCTTCCCCATGCTTGTCAAATCCTaGAGCAATTCCTACTGGATTTCGGAATTTATGGCCCAGAACTCT +
Preference number: 1 (lower is better)
Translates to: HLIKSVHGFPMLVKS*SNSYWISEFMAQNS
Trigger: AGAGTTCTGGGCCATAAATTCCGAAATCCAGTAGGAATTGCTGCAGGATTTGACAAGCATGGGGAAGCCGTGGACGGACTTTATAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571288.6
3UTR-3UTR CCA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCAGCTGTCACGCCCCTTaGACCCTGCTCTGCACCGAC +
Preference number: 2 (lower is better)
Translates to: PSQAASTQGDWTISRFSASCHAP*TLLCTD
Trigger: GTCGGTGCAGAGCAGGGTCCAAGGGGCGTGACAGCT...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR TCA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCCCACAAAGGCTTGCCTaGGTCCTTGGGAAGGTTCCA +
Preference number: 2 (lower is better)
Translates to: PSQAASTQGDWTISRFSAPQRLA*VLGKVP
Trigger: TGGAACCTTCCCAAGGACTCAGGCAAGCCTTTGTGG...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR GCA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCGGATGTCCCCTCTGTTaGTGTCTCCACGGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: PSQAASTQGDWTISRFSAGCPLC*CLHGGK
Trigger: TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCC...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCGCTTGCCTGAGTCCTTaGGAAGGTTCCAGATCAGGC +
Preference number: 2 (lower is better)
Translates to: PSQAASTQGDWTISRFSAACLSP*EGSRSG
Trigger: GCCTGATCTGGAACCTTCCCAAGGACTCAGGCAAGC...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCGGACCTGCAGTATCTTaGCAGGGCCTATGGCAAACC +
Preference number: 2 (lower is better)
Translates to: PSQAASTQGDWTISRFSAGPAVS*QGLWQT
Trigger: GGTTTGCCATAGGCCCTGCCAAGATACTGCAGGTCC...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR CAA 90 bp CAGAATGTGAAACATGCCAGCCCCTCAGCCCAGCTGTCACGCCCCTaGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACA +
Preference number: 2 (lower is better)
Translates to: QNVKHASPSAQLSRP*DPALHRHQNEGTGT
Trigger: TGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCGTGACAGCTGGGCTGAGGGGCTGGCATGTTTCACATTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR TCA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCGACCGAGGCCCAGCATaGACCATGCCACATAAGAAT +
Preference number: 2 (lower is better)
Translates to: PSQAASTQGDWTISRFSADRGPA*TMPHKN
Trigger: ATTCTTATGTGGCATGGTTCATGCTGGGCCTCGGTC...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCCAGCCATGCCATGGCTaGGGGACATGGCTCAAGATG +
Preference number: 2 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFQPCHG*GTWLKM
Trigger: CATCTTGAGCCATGTCCCCCAGCCATGGCATGGCTG...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR CAA 90 bp AGCTGCCTTCAGGGCAGCTCTGTCTTCAGGCCTCACAGGGTAGCTTaGAACAGGCAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGC +
Preference number: 2 (lower is better)
Translates to: SCLQGSSVFRPHRVA*NRQSQRSWGCPLCC
Trigger: GCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTGCCTGTTCAAAGCTACCCTGTGAGGCCTGAAGACAGAGCTGCCCTGAAGGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR GCA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAAAGGCCTGGATGGACCTaGAGTATCTTGGCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKRPGWT*SILAGP
Trigger: AGGCCCTGCCAAGATACTGCAGGTCCATCCAGGCCT...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR GCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTAGGCCTGGATGGACCTaGAGTATCTTGGCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFRPGWT*SILAGP
Trigger: AGGCCCTGCCAAGATACTGCAGGTCCATCCAGGCCT...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATTCACCATGGTGGCCTaGCTGGTCTCCAACTCCTGG +
Preference number: 2 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKFTMVA*LVSNSW
Trigger: CCAGGAGTTGGAGACCAGCCAGGCCACCATGGTGAA...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR GCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTGATTGGCGTTTACAGTaGAGCCATGCCATGGCTGGG +
Preference number: 2 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFDWRLQ*SHAMAG
Trigger: CCCAGCCATGGCATGGCTGCACTGTAAACGCCAATC...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTGGACCTGCAGTATCTTaGCAGGGCCTATGGCAAACC +
Preference number: 2 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFGPAVS*QGLWQT
Trigger: GGTTTGCCATAGGCCCTGCCAAGATACTGCAGGTCC...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCGACCCCGCAGGGGTCTaGCCAGCATGTGGTTCCTTT +
Preference number: 2 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGDPAGV*PACGSF
Trigger: AAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTC...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR TCA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCATGTCCTTGCAAGACTaGTGGATCCTAGGGTTTGAA +
Preference number: 2 (lower is better)
Translates to: PSQAASTQGDWTISRFSAMSLQD*WILGFE
Trigger: TTCAAACCCTAGGATCCATCAGTCTTGCAAGGACAT...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR GCA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATCAGAATGTGAAACATaGCAGCCCCTCAGCCCAGCT +
Preference number: 2 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKSECET*QPLSPA
Trigger: AGCTGGGCTGAGGGGCTGGCATGTTTCACATTCTGA...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCGGACATGGCTCAAGATaGAGTCCCTCCTCTCATGAT +
Preference number: 2 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFGHGSR*SPSSHD
Trigger: ATCATGAGAGGAGGGACTCCATCTTGAGCCATGTCC...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCCATGGCTGGGGGACATaGCTCAAGATGGAGTCCCTC +
Preference number: 2 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGHGWGT*LKMESL
Trigger: GAGGGACTCCATCTTGAGCCATGTCCCCCAGCCATG...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCCAGATAGCAGAGGCCTaGATGGACCTGCAGTATCTT +
Preference number: 2 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFQIAEA*MDLQYL
Trigger: AAGATACTGCAGGTCCATCCAGGCCTCTGCTATCTG...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATAAGCTGTCACGCCCCTTaGACCCTGCTCTGCACCGAC +
Preference number: 2 (lower is better)
Translates to: VPSVAVSTVGNGQLENLISCHAP*TLLCTD
Trigger: GTCGGTGCAGAGCAGGGTCCAAGGGGCGTGACAGCT...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR TCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCCCACAAAGGCTTGCCTaGGTCCTTGGGAAGGTTCCA +
Preference number: 2 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLPQRLA*VLGKVP
Trigger: TGGAACCTTCCCAAGGACTCAGGCAAGCCTTTGTGG...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR TCA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCTGTTTGTTTTGTGTGTaGCAGAGTCTTGATCTGTCG +
Preference number: 2 (lower is better)
Translates to: PSQAASTQGDWTISRFSACLFCV*QSLDLS
Trigger: CGACAGATCAAGACTCTGTCACACACAAAACAAACA...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR GCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCGGATGTCCCCTCTGTTaGTGTCTCCACGGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGGCPLC*CLHGGK
Trigger: TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCC...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCGGTCTGGCCAGCATGTaGTTCCTTTTGCCCATTCCC +
Preference number: 2 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLGLASM*FLLPIP
Trigger: GGGAATGGGCAAAAGGAACCACATGCTGGCCAGACC...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR GCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCAGTGAGCTGAGATCATaGCACTGCACTCTAGCCTGG +
Preference number: 2 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGSELRS*HCTLAW
Trigger: CCAGGCTAGAGTGCAGTGGCATGATCTCAGCTCACT...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR GCA 90 bp GAGCAGGATCTCACACCCCTGCTCACCTATAGGATTCACCAAGTACCATCATCCGTTCTCAGCTCCAGCTaGACCACAAAGGCCCCTGGC +
Preference number: 2 (lower is better)
Translates to: EQDLTPLLTYRIHQVPSSVLSSS*TTKAPG
Trigger: GCCAGGGGCCTTTGTGGTGCAGCTGGAGCTGAGAAC...GGATGATGGTACTTGGTGAATCCTATAGGTGAGCAGGGGTGTGAGATCCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571288.6
3UTR-3UTR CCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATAAGTGCAGCCATGCCATaGCTGGGGGACATGGCTCAA +
Preference number: 2 (lower is better)
Translates to: VPSVAVSTVGNGQLENLISAAMP*LGDMAQ
Trigger: TTGAGCCATGTCCCCCAGCCATGGCATGGCTGCACT...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCCCAAGGCTTGGTCCATaGCAGAGCCATTCAGCACAA +
Preference number: 2 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLPRLGP*QSHSAQ
Trigger: TTGTGCTGAATGGCTCTGCCATGGACCAAGCCTTGG...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR TCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCGAAAGGGAGGGCAGATaGCTCACAGAGAGCATCAAA +
Preference number: 2 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLEREGR*LTESIK
Trigger: TTTGATGCTCTCTGTGAGTCATCTGCCCTCCCTTTC...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR TCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCCTCTTCCAGCTGTGCTaGGACAGAATGTCAGTCTCT +
Preference number: 2 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGLFQLC*DRMSVS
Trigger: AGAGACTGACATTCTGTCTCAGCACAGCTGGAAGAG...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR TCA 90 bp GATATTGATCCCCACCTGTTAATGACAGCTTGGTCCTCAGGGAGGCGGAAGACTTCTCAGATGTGGCGGTaGAACTGGTCTGGCACCAGG +
Preference number: 2 (lower is better)
Translates to: DIDPHLLMTAWSSGRRKTSQMWR*NWSGTR
Trigger: CCTGGTGCCAGACCAGTTTCACCGCCACATCTGAGA...AGTCTTCCGCCTCCCTGAGGACCAAGCTGTCATTAACAGGTGGGGATCAATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571288.6
3UTR-3UTR GCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATATTTACAGTGCAGCCATaGCATGGCTGGGGGACATGG +
Preference number: 2 (lower is better)
Translates to: VPSVAVSTVGNGQLENLIFTVQP*HGWGTW
Trigger: CCATGTCCCCCAGCCATGGCATGGCTGCACTGTAAA...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR GCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTGCCCAGCATGAACCATaGCACATAAGAATAGTGAAG +
Preference number: 2 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFAQHEP*HIRIVK
Trigger: CTTCACTATTCTTATGTGGCATGGTTCATGCTGGGC...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR GCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCCTGAGGCAGAAGAATTaGTTGAACCCGGGAGACAGA +
Preference number: 2 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGLRQKN*LNPGDR
Trigger: TCTGTCTCCCGGGTTCAAGCAATTCTTCTGCCTCAG...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCGGACATGGCTCAAGATaGAGTCCCTCCTCTCATGAT +
Preference number: 2 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGGHGSR*SPSSHD
Trigger: ATCATGAGAGGAGGGACTCCATCTTGAGCCATGTCC...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp GTCCACGGCTTCCCCATGCTTGTCAAATCCTGCAGCAATTCCTACTGGATTTCGCACCACAAAGGCCCCTaGCAGCTTTCAGGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: VHGFPMLVKSCSNSYWISHHKGP*QLSGPA
Trigger: AGCAGGACCTGAAAGCTGCCAGGGGCCTTTGTGGTG...CGAAATCCAGTAGGAATTGCTGCAGGATTTGACAAGCATGGGGAAGCCGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571288.6
3UTR-3UTR TCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACAGGCGGAGTTTGCAGTaGGCTGAGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHRRSLQ*AEIMPL
Trigger: CAGTGGCATGATCTCAGCTCACTGCAAACTCCGCCT...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGCAGCCATGCCATGGCTaGGGGACATGGCTCAAGATG +
Preference number: 2 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLQPCHG*GTWLKM
Trigger: CATCTTGAGCCATGTCCCCCAGCCATGGCATGGCTG...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR TCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACAGACAGAGGTTGCAGTaGGCTGAGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHRQRLQ*AEIMPL
Trigger: CAGTGGCATGATCTCAGCTCACTGCAACCTCTGTCT...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp ACATCTTTATGCAGGGGAAAAGTCTGGGAGGACAGACAGAAAGGCATGTCTGCAAGTGCAGCCATGCCATaGCTGGGGGACATGGCTCAA +
Preference number: 2 (lower is better)
Translates to: TSLCRGKVWEDRQKGMSASAAMP*LGDMAQ
Trigger: TTGAGCCATGTCCCCCAGCCATGGCATGGCTGCACT...TGCAGACATGCCTTTCTGTCTGTCCTCCCAGACTTTTCCCCTGCATAAAGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTCAAAAATGCAGTTTATaGTCTGACCAAGGGACTGAA +
Preference number: 2 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFQKCSL*SDQGTE
Trigger: TTCAGTCCCTTGGTCAGACCATAAACTGCATTTTTG...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACATCTGTCGCCCAAGCTaGAGTGCACTGGTGCAATCT +
Preference number: 2 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHICRPS*SALVQS
Trigger: AGATTGCACCAGTGCACTCCAGCTTGGGCGACAGAT...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACGTGCACTGCTCTTCCTaGAGTAAGGAACGAATCCGG +
Preference number: 2 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHVHCSS*SKERIR
Trigger: CCGGATTCGTTCCTTACTCCAGGAAGAGCAGTGCAC...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR TCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTATGGATCCTAGGGTTTaGATCCACAAAGAATCAAAA +
Preference number: 2 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFMDPRV*IHKESK
Trigger: TTTTGATTCTTTGTGGATTCAAACCCTAGGATCCAT...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR TCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCGAGTGCTGTACCGTTTaGATTGCTAGTAAAGAATGC +
Preference number: 2 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLECCTV*IASKEC
Trigger: GCATTCTTTACTAGCAATTCAAACGGTACAGCACTC...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR GCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACCCATTCAGCACAACATaGTCTATGACCACACCGCTG +
Preference number: 2 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHPFSTT*SMTTPL
Trigger: CAGCGGTGTGGTCATAGAGCATGTTGTGCTGAATGG...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp ACATCTTTATGCAGGGGAAAAGTCTGGGAGGACAGACAGAAAGGCATGTCTGCAGCTTGCCTGAGTCCTTaGGAAGGTTCCAGATCAGGC +
Preference number: 2 (lower is better)
Translates to: TSLCRGKVWEDRQKGMSAACLSP*EGSRSG
Trigger: GCCTGATCTGGAACCTTCCCAAGGACTCAGGCAAGC...TGCAGACATGCCTTTCTGTCTGTCCTCCCAGACTTTTCCCCTGCATAAAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACTTGCTGTCTCCACGGTaGGAAATGGGCAGCTTGAAA +
Preference number: 2 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHLLSPR*EMGSLK
Trigger: TTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAA...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACGACAACTCCTTATCCTaGTGCTCAAGCAGCCTCTTC +
Preference number: 2 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHDNSLS*CSSSLF
Trigger: GAAGAGGCTGCTTGAGCACCAGGATAAGGAGTTGTC...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR GCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCGGGATTAAAAGTGCCTaGCACAATATCTGGCTAATT +
Preference number: 2 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLGIKSA*HNIWLI
Trigger: AATTAGCCAGATATTGTGGCAGGCACTTTTAATCCC...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR GCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCAAACAGATAACAGTGTaGATTCCATCCAGAAATCGG +
Preference number: 2 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGKQITV*IPSRNR
Trigger: CCGATTTCTGGATGGAATGCACACTGTTATCTGTTT...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp GCAGATAGCAGAGGCCTGGATGGACCTGCAGTATCTTGGCAGGGCCTATGGCAACAAAAATGCAGTTTATaGTCTGACCAAGGGACTGAA +
Preference number: 2 (lower is better)
Translates to: ADSRGLDGPAVSWQGLWQQKCSL*SDQGTE
Trigger: TTCAGTCCCTTGGTCAGACCATAAACTGCATTTTTG...TTGCCATAGGCCCTGCCAAGATACTGCAGGTCCATCCAGGCCTCTGCTATCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR TCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCATGGATCCTAGGGTTTaGATCCACAAAGAATCAAAA +
Preference number: 2 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLMDPRV*IHKESK
Trigger: TTTTGATTCTTTGTGGATTCAAACCCTAGGATCCAT...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CCA 90 bp ACATCTTTATGCAGGGGAAAAGTCTGGGAGGACAGACAGAAAGGCATGTCTGCACAGATAGCAGAGGCCTaGATGGACCTGCAGTATCTT +
Preference number: 2 (lower is better)
Translates to: TSLCRGKVWEDRQKGMSAQIAEA*MDLQYL
Trigger: AAGATACTGCAGGTCCATCCAGGCCTCTGCTATCTG...TGCAGACATGCCTTTCTGTCTGTCCTCCCAGACTTTTCCCCTGCATAAAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR TCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACGAGTGCTGTACCGTTTaGATTGCTAGTAAAGAATGC +
Preference number: 2 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHECCTV*IASKEC
Trigger: GCATTCTTTACTAGCAATTCAAACGGTACAGCACTC...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR GCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATAGGGATTAAAAGTGCCTaGCACAATATCTGGCTAATT +
Preference number: 2 (lower is better)
Translates to: VPSVAVSTVGNGQLENLIGIKSA*HNIWLI
Trigger: AATTAGCCAGATATTGTGGCAGGCACTTTTAATCCC...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR TCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATAAGTGTATGTACAAAATaGACATCTTTATGCAGGGGA +
Preference number: 2 (lower is better)
Translates to: VPSVAVSTVGNGQLENLISVCTK*TSLCRG
Trigger: TCCCCTGCATAAAGATGTTCATTTTGTACATACACT...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR TCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATAAGCCACATGTATGTCTaGGTGTATGTACAAAATGAA +
Preference number: 2 (lower is better)
Translates to: VPSVAVSTVGNGQLENLISHMYV*VYVQNE
Trigger: TTCATTTTGTACATACACTCAGACATACATGTGGCT...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR GCA 90 bp GAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTACCGTTTGAATTGCTAGTAGATTGGCGTTTACAGTaGAGCCATGCCATGGCTGGG +
Preference number: 2 (lower is better)
Translates to: EEQECLHFKSAVPFELLVDWRLQ*SHAMAG
Trigger: CCCAGCCATGGCATGGCTGCACTGTAAACGCCAATC...TACTAGCAATTCAAACGGTACAGCACTCTTGAAGTGTAAACATTCCTGTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR GCA 72 bp CAGCCCCTCAGCCCAGCTGTCACGCCCCTTGGACCCTaGTCTGCACCGACACCAGAACGAAGGCACAGGCAC +
Preference number: 3 (lower is better)
Translates to: QPLSPAVTPLGP*SAPTPERRHRH
Trigger: GTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCGTGACAGCTGGGCTGAGGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR CCA 72 bp AACATGCCAGCCCCTCAGCCCAGCTGTCACGCCCCTTaGACCCTGCTCTGCACCGACACCAGAACGAAGGCA +
Preference number: 3 (lower is better)
Translates to: NMPAPQPSCHAP*TLLCTDTRTKA
Trigger: TGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCGTGACAGCTGGGCTGAGGGGCTGGCATGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR CCA 72 bp CTCGAGCCCAGCCAAGCAGCCTCCACGCAGGGGGACTaGACAATCAGCCGCTTCTCTGCCCGTTTCCTCATC +
Preference number: 3 (lower is better)
Translates to: LEPSQAASTQGD*TISRFSARFLI
Trigger: GATGAGGAAACGGGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGGCTCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR CCA 72 bp GGAGGGTGTCCAGAGTATGTGCGCTGGCACCTGACGTaGCATGTCGGAGCCCAGGCTGAGGAAAGTGACCCC +
Preference number: 3 (lower is better)
Translates to: GGCPEYVRWHLT*HVGAQAEESDP
Trigger: GGGGTCACTTTCCTCAGCCTGGGCTCCGACATGCCACGTCAGGTGCCAGCGCACATACTCTGGACACCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CAA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTCAGCTGTCACGCCCCTaGGACCCTGCTCTGCACCGA +
Preference number: 3 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFQLSRP*DPALHR
Trigger: TCGGTGCAGAGCAGGGTCCAAGGGGCGTGACAGCTG...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR GCA 72 bp CCTCAGCCCAGCTGTCACGCCCCTTGGACCCTGCTCTaGACCGACACCAGAACGAAGGCACAGGCACATTCA +
Preference number: 3 (lower is better)
Translates to: PQPSCHAPWTLL*TDTRTKAQAHS
Trigger: TGAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCGTGACAGCTGGGCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR CCA 72 bp CGTGGTTCTCAGCTCCAGCTGCACCACAAAGGCCCCTaGCAGCTTTCAGGTCCTGCTCTCAGATGTGGCGGT +
Preference number: 3 (lower is better)
Translates to: RGSQLQLHHKGP*QLSGPALRCGG
Trigger: ACCGCCACATCTGAGAGCAGGACCTGAAAGCTGCCAGGGGCCTTTGTGGTGCAGCTGGAGCTGAGAACCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571288.6
3UTR CCA 72 bp GTAGGCAAGATGTGTAGGGGCCTTCCTCCAGGACCGTaGTTCTCAGCTCCAGCTGCACCACAAAGGCCCCTG +
Preference number: 3 (lower is better)
Translates to: VGKMCRGLPPGP*FSAPAAPQRPL
Trigger: CAGGGGCCTTTGTGGTGCAGCTGGAGCTGAGAACCACGGTCCTGGAGGAAGGCCCCTACACATCTTGCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571288.6
3UTR TCA 72 bp AATGAGGAGGGTGTCCAGAGTATGTGCGCTGGCACCTaGCGTGGCATGTCGGAGCCCAGGCTGAGGAAAGTG +
Preference number: 3 (lower is better)
Translates to: NEEGVQSMCAGT*RGMSEPRLRKV
Trigger: CACTTTCCTCAGCCTGGGCTCCGACATGCCACGTCAGGTGCCAGCGCACATACTCTGGACACCCTCCTCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR GCA 72 bp AAGGCTTGGTCCATGGCAGAGCCATTCAGCACAACATaGTCTATGACCACACCGCTGGGCTCGAGCCCAGCC +
Preference number: 3 (lower is better)
Translates to: KAWSMAEPFSTT*SMTTPLGSSPA
Trigger: GGCTGGGCTCGAGCCCAGCGGTGTGGTCATAGAGCATGTTGTGCTGAATGGCTCTGCCATGGACCAAGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR CCA 72 bp CTGGGAAGCCCACTGCAGATGCAGATAGCAGAGGCCTaGATGGACCTGCAGTATCTTGGCAGGGCCTATGGC +
Preference number: 3 (lower is better)
Translates to: LGSPLQMQIAEA*MDLQYLGRAYG
Trigger: GCCATAGGCCCTGCCAAGATACTGCAGGTCCATCCAGGCCTCTGCTATCTGCATCTGCAGTGGGCTTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CAA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGACCTGCAGTATCTaGGCAGGGCCTATGGCAAAC +
Preference number: 3 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKWTCSI*AGPMAN
Trigger: GTTTGCCATAGGCCCTGCCAAGATACTGCAGGTCCA...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CAA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCGGGATGTCCCCTCTGTaGCTGTCTCCACGGTGGGAA +
Preference number: 3 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGGMSPL*LSPRWE
Trigger: TTCCCACCGTGGAGACAGCAACAGAGGGGACATCCC...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CAA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCGGCTTGCCTGAGTCCTaGGGAAGGTTCCAGATCAGG +
Preference number: 3 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLGLPES*GRFQIR
Trigger: CCTGATCTGGAACCTTCCCAAGGACTCAGGCAAGCC...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CAA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCCCTCACAGGGTAGCTTaGAACAGGCAGAGCCAGAGG +
Preference number: 3 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGPHRVA*NRQSQR
Trigger: CCTCTGGCTCTGCCTGTTCAAAGCTACCCTGTGAGG...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR TCA 72 bp CTGGCAGCTTTCAGGTCCTGCTCTCAGATGTGGCGGTaGAACTGGTCTGGCACCAGGCCAGGGCATCTGAAT +
Preference number: 3 (lower is better)
Translates to: LAAFRSCSQMWR*NWSGTRPGHLN
Trigger: ATTCAGATGCCCTGGCCTGGTGCCAGACCAGTTTCACCGCCACATCTGAGAGCAGGACCTGAAAGCTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571288.6
3UTR GCA 72 bp CATCCAGCCCACAGTCAGTGTTCAGTGGACATGAGCTaGCTTCAGGGCAGCTCTGTCTTCAGGCCTCACAGG +
Preference number: 3 (lower is better)
Translates to: HPAHSQCSVDMS*LQGSSVFRPHR
Trigger: CCTGTGAGGCCTGAAGACAGAGCTGCCCTGAAGGCAGCTCATGTCCACTGAACACTGACTGTGGGCTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR TCA 72 bp ATCTCAGCACTTTGGGAGACTGAGGCGGCCAGATCATaGGGTCAGGAGATCGAACCATCCTGGCTAACACGG +
Preference number: 3 (lower is better)
Translates to: ISALWETEAARS*GQEIEPSWLTR
Trigger: CCGTGTTAGCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAAGTGCTGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR CCA 72 bp TCTCATGATCCAGCCACAAAGGCTTGCCTGAGTCCTTaGGAAGGTTCCAGATCAGGCTTCCCGTCAGACGCT +
Preference number: 3 (lower is better)
Translates to: SHDPATKACLSP*EGSRSGFPSDA
Trigger: AGCGTCTGACGGGAAGCCTGATCTGGAACCTTCCCAAGGACTCAGGCAAGCCTTTGTGGCTGGATCATGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CAA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCGCTGTACCGTTTGAATaGCTAGTAAAGAATGCAGGT +
Preference number: 3 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFAVPFE*LVKNAG
Trigger: ACCTGCATTCTTTACTAGCAATTCAAACGGTACAGC...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR TCA 72 bp CCTGATAGGAGCAACTTGGCTCTATCTATCAGAATGTaGAACATGCCAGCCCCTCAGCCCAGCTGTCACGCC +
Preference number: 3 (lower is better)
Translates to: PDRSNLALSIRM*NMPAPQPSCHA
Trigger: GGCGTGACAGCTGGGCTGAGGGGCTGGCATGTTTCACATTCTGATAGATAGAGCCAAGTTGCTCCTATCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR CCA 72 bp GAAGGCAATGAGCCGGCTTTTAGAGCAGCCAAGGCTTaGTCCATGGCAGAGCCATTCAGCACAACATGCTCT +
Preference number: 3 (lower is better)
Translates to: EGNEPAFRAAKA*SMAEPFSTTCS
Trigger: AGAGCATGTTGTGCTGAATGGCTCTGCCATGGACCAAGCCTTGGCTGCTCTAAAAGCCGGCTCATTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR-3UTR CAA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACTGGACCTGCAGTATCTaGGCAGGGCCTATGGCAAAC +
Preference number: 3 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHWTCSI*AGPMAN
Trigger: GTTTGCCATAGGCCCTGCCAAGATACTGCAGGTCCA...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR TCA 72 bp GGAGGACAGACAGAAAGGCATGTCTGCAGAGTGGGGTaGGGAGGAACAGGAATGTTTACACTTCAAGAGTGC +
Preference number: 3 (lower is better)
Translates to: GGQTERHVCRVG*GGTGMFTLQEC
Trigger: GCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACATGCCTTTCTGTCTGTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR TCA 72 bp CTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTaGAAACCTGATAGGAGCAACTTGGCTCTATCTATC +
Preference number: 3 (lower is better)
Translates to: LCCCLHGGKWAA*KPDRSNLALSI
Trigger: GATAGATAGAGCCAAGTTGCTCCTATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR TCA 72 bp GGGAGGCGGAAGACTCTGGGTCTAGGGTTTCCTTCCTaGGGTTTTGGAGTCACACTTCCTATCTCAACAAAA +
Preference number: 3 (lower is better)
Translates to: GRRKTLGLGFPS*GFGVTLPISTK
Trigger: TTTTGTTGAGATAGGAAGTGTGACTCCAAAACCTCAGGAAGGAAACCCTAGACCCAGAGTCTTCCGCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571288.6
3UTR GCA 72 bp AAGTCCGTCCACGGCTTCCCCATGCTTGTCAAATCCTaGAGCAATTCCTACTGGATTTCGGAATTTATGGCC +
Preference number: 3 (lower is better)
Translates to: KSVHGFPMLVKS*SNSYWISEFMA
Trigger: GGCCATAAATTCCGAAATCCAGTAGGAATTGCTGCAGGATTTGACAAGCATGGGGAAGCCGTGGACGGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571288.6
3UTR-3UTR CAA 90 bp GAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTACCGTTTGAATTGCTAGTAGGCTTGCCTGAGTCCTaGGGAAGGTTCCAGATCAGG +
Preference number: 3 (lower is better)
Translates to: EEQECLHFKSAVPFELLVGLPES*GRFQIR
Trigger: CCTGATCTGGAACCTTCCCAAGGACTCAGGCAAGCC...TACTAGCAATTCAAACGGTACAGCACTCTTGAAGTGTAAACATTCCTGTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR CCA 72 bp TTCCCCATGCTTGTCAAATCCTGCAGCAATTCCTACTaGATTTCGGAATTTATGGCCCAGAACTCTCACTTC +
Preference number: 3 (lower is better)
Translates to: FPMLVKSCSNSY*ISEFMAQNSHF
Trigger: GAAGTGAGAGTTCTGGGCCATAAATTCCGAAATCCAGTAGGAATTGCTGCAGGATTTGACAAGCATGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571288.6
CDS-3UTR TCA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCCTCCGCGGCGTCCACTaGGGTCTTGTTCTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: PSQAASTQGDWTISRFSALRGVH*GLVLPQ
Trigger: TTGGGGAAGAACAAGACCTCAGTGGACGCCGCGGAG...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCATGTGCGCTGGCACCTaGCGTGGCATGTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFMCAGT*RGMSEP
Trigger: GGGCTCCGACATGCCACGTCAGGTGCCAGCGCACAT...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTAGGGCCGTGTACAGCTaGACCAGGGAGGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFRAVYS*TREAPA
Trigger: GGCAGGGGCCTCCCTGGTGCAGCTGTACACGGCCCT...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCGAGCGCAGGGCACCCTaGAGGCCCGCAGGGCGACTC +
Preference number: 4 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGERRAP*RPAGRL
Trigger: GAGTCGCCCTGCGGGCCTCCAGGGTGCCCTGCGCTC...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCGACCCCGCAGGGGTCTaGCCAGCATGTGGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: PSQAASTQGDWTISRFSADPAGV*PACGSF
Trigger: AAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTC...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR CAA 72 bp AAACATGCCAGCCCCTCAGCCCAGCTGTCACGCCCCTaGGACCCTGCTCTGCACCGACACCAGAACGAAGGC +
Preference number: 4 (lower is better)
Translates to: KHASPSAQLSRP*DPALHRHQNEG
Trigger: GCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCGTGACAGCTGGGCTGAGGGGCTGGCATGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCCTCCAATGGCATCTGTaGCTCCGCCAAAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PSQAASTQGDWTISRFSALQWHL*LRQSPA
Trigger: AGCAGGGCTTTGGCGGAGTCACAGATGCCATTGGAG...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCAGCACTTTGGGAGACTaGGGCGGCCAGATCATGAGG +
Preference number: 4 (lower is better)
Translates to: PSQAASTQGDWTISRFSASTLGD*GGQIMR
Trigger: CCTCATGATCTGGCCGCCTCAGTCTCCCAAAGTGCT...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCAGGCCTGGATGGACCTaGAGTATCTTGGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PSQAASTQGDWTISRFSARPGWT*SILAGP
Trigger: AGGCCCTGCCAAGATACTGCAGGTCCATCCAGGCCT...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp AGCTGCACCACAAAGGCCCCTGGCAGCTTTCAGGTCCTGCTCTCAGATGTGGCGGGAGCCCCAGGGAGGTaGAGCGAACAGCCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: SCTTKAPGSFQVLLSDVAGAPGR*SEQPVC
Trigger: ACAGACTGGCTGTTCGCTTCACCTCCCTGGGGCTCC...CGCCACATCTGAGAGCAGGACCTGAAAGCTGCCAGGGGCCTTTGTGGTGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571288.6
CDS-3UTR TCA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCGCAGTCCATCTTCTGTaGGCTTGGCCTGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PSQAASTQGDWTISRFSAAVHLL*AWPASA
Trigger: AGCAGAAGCAGGCCAAGCTCACAGAAGATGGACTGC...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCTGTTCTTCCCCAAGTTaGCCCCCAGAGGCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: PSQAASTQGDWTISRFSACSSPS*PPEAVH
Trigger: ATGGACTGCCTCTGGGGGTCAACTTGGGGAAGAACA...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp GCAGATAGCAGAGGCCTGGATGGACCTGCAGTATCTTGGCAGGGCCTATGGCAAAGCTCGGCCTTTCCCTaGAGGCTCCGCAGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: ADSRGLDGPAVSWQGLWQSSAFP*RLRSPA
Trigger: TGCCGGGCTGCGGAGCCTTCAGGGAAAGGCCGAGCT...TTGCCATAGGCCCTGCCAAGATACTGCAGGTCCATCCAGGCCTCTGCTATCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCAGGCGGAGTTTGCAGTaGGCTGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: PSQAASTQGDWTISRFSARRSLQ*AEIMPL
Trigger: CAGTGGCATGATCTCAGCTCACTGCAAACTCCGCCT...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CTCAGCTCCAGCTGCACCACAAAGGCCCCTGGCAGCTTTCAGGTCCTGCTCTCAGGGTCCAGCAGCCCCTaGAGAGTCGGCATCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LSSSCTTKAPGSFQVLLSGSSSP*RVGIRC
Trigger: ACACCTGATGCCGACTCTGCAGGGGCTGCTGGACCC...TGAGAGCAGGACCTGAAAGCTGCCAGGGGCCTTTGTGGTGCAGCTGGAGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571288.6
CDS-3UTR GCA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAAAGGACTGCCGGCCTGTaGACTCTCCGCAAGCCATCC +
Preference number: 4 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKRTAGL*TLRKPS
Trigger: GGATGGCTTGCGGAGAGTGCACAGGCCGGCAGTCCT...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCTCAGTGGACATGAGCTaGCTTCAGGGCAGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PSQAASTQGDWTISRFSASVDMS*LQGSSV
Trigger: GACAGAGCTGCCCTGAAGGCAGCTCATGTCCACTGA...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAAAGCTGTCACGCCCCTTaGACCCTGCTCTGCACCGAC +
Preference number: 4 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKSCHAP*TLLCTD
Trigger: GTCGGTGCAGAGCAGGGTCCAAGGGGCGTGACAGCT...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTAGCTGTCACGCCCCTTaGACCCTGCTCTGCACCGAC +
Preference number: 4 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFSCHAP*TLLCTD
Trigger: GTCGGTGCAGAGCAGGGTCCAAGGGGCGTGACAGCT...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTCCTCCAGTTCCCGCTTaGCTTTGCCCACAACGGGTG +
Preference number: 4 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFPPVPA*LCPQRV
Trigger: CACCCGTTGTGGGCAAAGTCAAGCGGGAACTGGAGG...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCCTCCAATGGCATCTGTaGCTCCGCCAAAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFLQWHL*LRQSPA
Trigger: AGCAGGGCTTTGGCGGAGTCACAGATGCCATTGGAG...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCTGTCCTCACCTCCGATaGTCTGCTCCAATGGCATCT +
Preference number: 4 (lower is better)
Translates to: PSQAASTQGDWTISRFSACPHLR*SAPMAS
Trigger: AGATGCCATTGGAGCAGATCATCGGAGGTGAGGACA...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCAGACAGAGGTTGCAGTaGGCTGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: PSQAASTQGDWTISRFSARQRLQ*AEIMPL
Trigger: CAGTGGCATGATCTCAGCTCACTGCAACCTCTGTCT...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATAGCCGGGCAGAAGGGTTaGGAGGACGCCTCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: VPSVAVSTVGNGQLENLIAGQKG*EDASAQ
Trigger: CTGCGCGGAGGCGTCCTCTCAACCCTTCTGCCCGGC...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572887.5
CDS-3UTR GCA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCTCTGTGAGCTTGGCCTaGTTCTGCTGTCTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFSVSLA*FCCLAR
Trigger: ACGGGCCAGACAGCAGAAGCAGGCCAAGCTCACAGA...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCGCGCGTCCTGCCCGCTaGTCACACCACCAACCCCAA +
Preference number: 4 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGARPAR*SHHQPQ
Trigger: TTGGGGTTGGTGGTGTGAGCAGCGGGCAGGACGCGC...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAAGCAGCCCGGCAGTGTTaGGGCTGGACACATTCACCA +
Preference number: 4 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKAARQC*GWTHSP
Trigger: TGGTGAATGTGTCCAGCCCCAACACTGCCGGGCTGC...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAAGACCCCGCAGGGGTCTaGCCAGCATGTGGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKDPAGV*PACGSF
Trigger: AAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTC...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR CAA 72 bp CAGGGCAGCTCTGTCTTCAGGCCTCACAGGGTAGCTTaGAACAGGCAGAGCCAGAGGAGCTGGGGATGTCCC +
Preference number: 4 (lower is better)
Translates to: QGSSVFRPHRVA*NRQSQRSWGCP
Trigger: GGGACATCCCCAGCTCCTCTGGCTCTGCCTGTTCAAAGCTACCCTGTGAGGCCTGAAGACAGAGCTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATAAGCCAGTCTGTGGGCTaGCTCCGGGTCCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VPSVAVSTVGNGQLENLISQSVG*LRVQQP
Trigger: GGGCTGCTGGACCCGGAGTCAGCCCACAGACTGGCT...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCAAAGCCCAGAGAGAATaGGGAGGGTGTCCAGAGTAT +
Preference number: 4 (lower is better)
Translates to: PSQAASTQGDWTISRFSAKAQRE*GGCPEY
Trigger: ATACTCTGGACACCCTCCTCATTCTCTCTGGGCTTT...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCGAAAGGGAGGGCAGATaGCTCACAGAGAGCATCAAA +
Preference number: 4 (lower is better)
Translates to: PSQAASTQGDWTISRFSAEREGR*LTESIK
Trigger: TTTGATGCTCTCTGTGAGTCATCTGCCCTCCCTTTC...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCGCACTCCAGCCGGGGTaGCAGAGCAGGACTCCATCT +
Preference number: 4 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLALQPG*QSRTPS
Trigger: AGATGGAGTCCTGCTCTGTCACCCCGGCTGGAGTGC...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCCAGGATTCCCAGCATTaGGAGCTGCTCTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFQDSQH*ELLWCL
Trigger: CAGACACCAGAGCAGCTCTCAATGCTGGGAATCCTG...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTAGCTTGGCCTGCTTCTaGTGTCTGGCCCGTAACCTG +
Preference number: 4 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFSLACF*CLARNL
Trigger: CAGGTTACGGGCCAGACAGCAGAAGCAGGCCAAGCT...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATCTGTGAGCTTGGCCTaGTTCTGCTGTCTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKSVSLA*FCCLAR
Trigger: ACGGGCCAGACAGCAGAAGCAGGCCAAGCTCACAGA...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCGGATGTCCCCTCTGTTaGTGTCTCCACGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFGCPLC*CLHGGK
Trigger: TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCC...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCCCATTCAGCACAACATaGTCTATGACCACACCGCTG +
Preference number: 4 (lower is better)
Translates to: PSQAASTQGDWTISRFSAPFSTT*SMTTPL
Trigger: CAGCGGTGTGGTCATAGAGCATGTTGTGCTGAATGG...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCGGGAACTTGGGTGAGTaGATACATCTCCCGAATGGT +
Preference number: 4 (lower is better)
Translates to: PSQAASTQGDWTISRFSAGNLGE*IHLPNG
Trigger: ACCATTCGGGAGATGTATGCACTCACCCAAGTTCCC...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572887.5
CDS-3UTR CCA 90 bp GCAGATAGCAGAGGCCTGGATGGACCTGCAGTATCTTGGCAGGGCCTATGGCAACGAACAGCCAGTCTGTaGGCTGACTCCGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ADSRGLDGPAVSWQGLWQRTASL*ADSGSS
Trigger: GCTGGACCCGGAGTCAGCCCACAGACTGGCTGTTCG...TTGCCATAGGCCCTGCCAAGATACTGCAGGTCCATCCAGGCCTCTGCTATCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCCGAACAGCCAGTCTGTaGGCTGACTCCGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLRTASL*ADSGSS
Trigger: GCTGGACCCGGAGTCAGCCCACAGACTGGCTGTTCG...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CCAGCTGCACCACAAAGGCCCCTGGCAGCTTTCAGGTCCTGCTCTCAGATGTGGTTGAAATCTGGCCCGTaGAAGGAGCCCCAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PAAPQRPLAAFRSCSQMWLKSGP*KEPQGG
Trigger: ACCTCCCTGGGGCTCCTTCCACGGGCCAGATTTCAA...CCACATCTGAGAGCAGGACCTGAAAGCTGCCAGGGGCCTTTGTGGTGCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571288.6
CDS-3UTR CCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTCGGCAGTGTTGGGGCTaGACACATTCACCACCAGGT +
Preference number: 4 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFRQCWG*THSPPG
Trigger: ACCTGGTGGTGAATGTGTCCAGCCCCAACACTGCCG...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCTCTCCTGCAGCACCTTaGTCAGCAGGCGGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLSPAAP*SAGGAA
Trigger: AGCTGCGCCGCCTGCTGACCAAGGTGCTGCAGGAGA...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGGAGCGCAGGGCACCCTaGAGGCCCGCAGGGCGACTC +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLERRAP*RPAGRL
Trigger: GAGTCGCCCTGCGGGCCTCCAGGGTGCCCTGCGCTC...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTCATGGCTGGGGGACATaGCTCAAGATGGAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFHGWGT*LKMESL
Trigger: GAGGGACTCCATCTTGAGCCATGTCCCCCAGCCATG...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAACAGCCATGCCATGGCTaGGGGACATGGCTCAAGATG +
Preference number: 4 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKQPCHG*GTWLKM
Trigger: CATCTTGAGCCATGTCCCCCAGCCATGGCATGGCTG...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAAAGTGCAGCCATGCCATaGCTGGGGGACATGGCTCAA +
Preference number: 4 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKSAAMP*LGDMAQ
Trigger: TTGAGCCATGTCCCCCAGCCATGGCATGGCTGCACT...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTAGTGCAGCCATGCCATaGCTGGGGGACATGGCTCAA +
Preference number: 4 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFSAAMP*LGDMAQ
Trigger: TTGAGCCATGTCCCCCAGCCATGGCATGGCTGCACT...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAACCAGAGTATGTGCGCTaGCACCTGACGTGGCATGTC +
Preference number: 4 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKPEYVR*HLTWHV
Trigger: GACATGCCACGTCAGGTGCCAGCGCACATACTCTGG...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR CAA 72 bp CAGGCAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTaGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: QAEPEELGMSPL*LSPRWEMGSLK
Trigger: TTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTCCTTATCCTGGCTGGTaGGGTCAGGAGCGATCTTCA +
Preference number: 4 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFPYPGW*GQERSS
Trigger: TGAAGATCGCTCCTGACCTCACCAGCCAGGATAAGG...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCCGATGCCCAACTCTTTaGCCACACTGGCAATGTCCT +
Preference number: 4 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFRCPTL*PHWQCP
Trigger: AGGACATTGCCAGTGTGGTCAAAGAGTTGGGCATCG...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCCCTCCAGTTCCCGCTTaGCTTTGCCCACAACGGGTG +
Preference number: 4 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLPPVPA*LCPQRV
Trigger: CACCCGTTGTGGGCAAAGTCAAGCGGGAACTGGAGG...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTCCACAAAGGCTTGCCTaGGTCCTTGGGAAGGTTCCA +
Preference number: 4 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFPQRLA*VLGKVP
Trigger: TGGAACCTTCCCAAGGACTCAGGCAAGCCTTTGTGG...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTAGTGTTCAGTGGACATaGGCTGCCTTCAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFSVQWT*AAFRAA
Trigger: AGCTGCCCTGAAGGCAGCTCATGTCCACTGAACACT...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCTCCACGGCTTCCCCATaGTTGTCAAATCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFSTASP*LSNPAA
Trigger: TGCTGCAGGATTTGACAAGCATGGGGAAGCCGTGGA...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATATACGCGCACCCCTTCTaGGTAGTCCTCCGCGGCGTC +
Preference number: 4 (lower is better)
Translates to: VPSVAVSTVGNGQLENLIYAHPF*VVLRGV
Trigger: GACGCCGCGGAGGACTACGCAGAAGGGGTGCGCGTA...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCGATCTTCACCAGGACTaGCGGCCTGTGCACTCTCCG +
Preference number: 4 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGDLHQD*RPVHSP
Trigger: CGGAGAGTGCACAGGCCGGCAGTCCTGGTGAAGATC...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCTCGGCCTTGGGTGAGTaGATACATCTCCCGAATGGT +
Preference number: 4 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFSALGE*IHLPNG
Trigger: ACCATTCGGGAGATGTATGCACTCACCCAAGGCCGA...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219240.9
CDS-3UTR GCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTTTTACAGTGCAGCCATaGCATGGCTGGGGGACATGG +
Preference number: 4 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFFTVQP*HGWGTW
Trigger: CCATGTCCCCCAGCCATGGCATGGCTGCACTGTAAA...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCTCAGAATGTGAAACATaGCAGCCCCTCAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFSECET*QPLSPA
Trigger: AGCTGGGCTGAGGGGCTGGCATGTTTCACATTCTGA...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTTCAGTGGACATGAGCTaGCTTCAGGGCAGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFSVDMS*LQGSSV
Trigger: GACAGAGCTGCCCTGAAGGCAGCTCATGTCCACTGA...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTCCGGGAGACAGAGGTTaGAGTGAGCTGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFPGDRG*SELRSC
Trigger: GCATGATCTCAGCTCACTGCAACCTCTGTCTCCCGG...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTCCTGCTTCTGCTGTCTaGCCCGTAACCTGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFPASAV*PVTCVP
Trigger: TGGAACACAGGTTACGGGCCAGACAGCAGAAGCAGG...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCGCAGCCCGGCAGTGTTaGGGCTGGACACATTCACCA +
Preference number: 4 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGAARQC*GWTHSP
Trigger: TGGTGAATGTGTCCAGCCCCAACACTGCCGGGCTGC...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAAAGAGCAGCCAAGGCTTaGTCCATGGCAGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKRAAKA*SMAEPF
Trigger: GAATGGCTCTGCCATGGACCAAGCCTTGGCTGCTCT...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTGGTCTGGCCAGCATGTaGTTCCTTTTGCCCATTCCC +
Preference number: 4 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFGLASM*FLLPIP
Trigger: GGGAATGGGCAAAAGGAACCACATGCTGGCCAGACC...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp GCAGATAGCAGAGGCCTGGATGGACCTGCAGTATCTTGGCAGGGCCTATGGCAACATTGGAGGAGATGGTaGCGGCCCCTCTTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: ADSRGLDGPAVSWQGLWQHWRRW*RPLLSP
Trigger: CGGAGACAAGAGGGGCCGCCACCATCTCCTCCAATG...TTGCCATAGGCCCTGCCAAGATACTGCAGGTCCATCCAGGCCTCTGCTATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572887.5
CDS-3UTR CCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCCTGTCTCCCTTCCATTaGAGGAGATGGTGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGLSPFH*RRWWRP
Trigger: GGGCCGCCACCATCTCCTCCAATGGAAGGGAGACAG...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572887.5
CDS-3UTR TCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGAGCTCGGCCTTTCCCTaGAGGCTCCGCAGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLSSAFP*RLRSPA
Trigger: TGCCGGGCTGCGGAGCCTTCAGGGAAAGGCCGAGCT...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGTCCTCACCTCCGATaGTCTGCTCCAATGGCATCT +
Preference number: 4 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKCPHLR*SAPMAS
Trigger: AGATGCCATTGGAGCAGATCATCGGAGGTGAGGACA...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTGACCGAGGCCCAGCATaGACCATGCCACATAAGAAT +
Preference number: 4 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFDRGPA*TMPHKN
Trigger: ATTCTTATGTGGCATGGTTCATGCTGGGCCTCGGTC...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACATGTGCGCTGGCACCTaGCGTGGCATGTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHMCAGT*RGMSEP
Trigger: GGGCTCCGACATGCCACGTCAGGTGCCAGCGCACAT...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATAGGGTCCAGCAGCCCCTaGAGAGTCGGCATCAGGTGT +
Preference number: 4 (lower is better)
Translates to: VPSVAVSTVGNGQLENLIGSSSP*RVGIRC
Trigger: ACACCTGATGCCGACTCTGCAGGGGCTGCTGGACCC...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp GCAGATAGCAGAGGCCTGGATGGACCTGCAGTATCTTGGCAGGGCCTATGGCAAAGCTTGGCCTGCTTCTaGTGTCTGGCCCGTAACCTG +
Preference number: 4 (lower is better)
Translates to: ADSRGLDGPAVSWQGLWQSLACF*CLARNL
Trigger: CAGGTTACGGGCCAGACAGCAGAAGCAGGCCAAGCT...TTGCCATAGGCCCTGCCAAGATACTGCAGGTCCATCCAGGCCTCTGCTATCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACTACGCGCACCCCTTCTaGGTAGTCCTCCGCGGCGTC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHYAHPF*VVLRGV
Trigger: GACGCCGCGGAGGACTACGCAGAAGGGGTGCGCGTA...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp GCAGATAGCAGAGGCCTGGATGGACCTGCAGTATCTTGGCAGGGCCTATGGCAAAAGCCATCCCTCTCCTaGAGCACCTTGGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ADSRGLDGPAVSWQGLWQKPSLS*STLVSR
Trigger: CCTGCTGACCAAGGTGCTGCAGGAGAGGGATGGCTT...TTGCCATAGGCCCTGCCAAGATACTGCAGGTCCATCCAGGCCTCTGCTATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCAAGCCATCCCTCTCCTaGAGCACCTTGGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLKPSLS*STLVSR
Trigger: CCTGCTGACCAAGGTGCTGCAGGAGAGGGATGGCTT...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATATTCTCCAGCGCGTCCTaGCCGCTGCTCACACCACCA +
Preference number: 4 (lower is better)
Translates to: VPSVAVSTVGNGQLENLIFSSAS*PLLTPP
Trigger: TGGTGGTGTGAGCAGCGGGCAGGACGCGCTGGAGAA...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCACTCCGCCAAAGCCCTaGTCTTTCAGAAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGTPPKP*SFRRAS
Trigger: GGAGGCCCTTCTGAAAGAGCAGGGCTTTGGCGGAGT...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCCCTTGGACCCTGCTCTaGACCGACACCAGAACGAAG +
Preference number: 4 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLPWTLL*TDTRTK
Trigger: CTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGG...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCCCTTGGACCCTGCTCTaGACCGACACCAGAACGAAG +
Preference number: 4 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGPWTLL*TDTRTK
Trigger: CTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGG...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAAAGTGAGCTGAGATCATaGCACTGCACTCTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKSELRS*HCTLAW
Trigger: CCAGGCTAGAGTGCAGTGGCATGATCTCAGCTCACT...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CTCAGCTCCAGCTGCACCACAAAGGCCCCTGGCAGCTTTCAGGTCCTGCTCTCACTGTTAATGACAGCTTaGTCCTCAGGGAGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: LSSSCTTKAPGSFQVLLSLLMTA*SSGRRK
Trigger: CTTCCGCCTCCCTGAGGACCAAGCTGTCATTAACAG...TGAGAGCAGGACCTGAAAGCTGCCAGGGGCCTTTGTGGTGCAGCTGGAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571288.6
CDS-3UTR CCA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAACTGTTAATGACAGCTTaGTCCTCAGGGAGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKLLMTA*SSGRRK
Trigger: CTTCCGCCTCCCTGAGGACCAAGCTGTCATTAACAG...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCCAGCCATGCCATGGCTaGGGGACATGGCTCAAGATG +
Preference number: 4 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLQPCHG*GTWLKM
Trigger: CATCTTGAGCCATGTCCCCCAGCCATGGCATGGCTG...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCTTCACCATGGTGGCCTaGCTGGTCTCCAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGFTMVA*LVSNSW
Trigger: CCAGGAGTTGGAGACCAGCCAGGCCACCATGGTGAA...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTCCAAGGCTTGGTCCATaGCAGAGCCATTCAGCACAA +
Preference number: 4 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFPRLGP*QSHSAQ
Trigger: TTGTGCTGAATGGCTCTGCCATGGACCAAGCCTTGG...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTGTGCACTGCTCTTCCTaGAGTAAGGAACGAATCCGG +
Preference number: 4 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFVHCSS*SKERIR
Trigger: CCGGATTCGTTCCTTACTCCAGGAAGAGCAGTGCAC...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTGTAATCTCAGCACTTTaGGAGACTGAGGCGGCCAGA +
Preference number: 4 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFVISAL*ETEAAR
Trigger: TCTGGCCGCCTCAGTCTCCCAAAGTGCTGAGATTAC...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp AGGAGACTGGTAGGCAAGATGTGTAGGGGCCTTCCTCCAGGACCGTGGTTCTCACACCACAAAGGCCCCTaGCAGCTTTCAGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RRLVGKMCRGLPPGPWFSHHKGP*QLSGPA
Trigger: AGCAGGACCTGAAAGCTGCCAGGGGCCTTTGTGGTG...TGAGAACCACGGTCCTGGAGGAAGGCCCCTACACATCTTGCCTACCAGTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571288.6
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACGGAGCCCCAGGGAGGTaGAGCGAACAGCCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHGAPGR*SEQPVC
Trigger: ACAGACTGGCTGTTCGCTTCACCTCCCTGGGGCTCC...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCACCACTGAAAGCCCGTaGCTGTTAAATCCATACCTG +
Preference number: 4 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFTTESP*LLNPYL
Trigger: CAGGTATGGATTTAACAGTCACGGGCTTTCAGTGGT...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCATCTCCCGAATGGTTTaGGTTGATAAATCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFISRMV*VDKSRR
Trigger: CCTCCGGGATTTATCAACTCAAACCATTCGGGAGAT...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTAAAGCCCAGAGAGAATaGGGAGGGTGTCCAGAGTAT +
Preference number: 4 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFKAQRE*GGCPEY
Trigger: ATACTCTGGACACCCTCCTCATTCTCTCTGGGCTTT...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCAGGCGGAGTTTGCAGTaGGCTGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLRRSLQ*AEIMPL
Trigger: CAGTGGCATGATCTCAGCTCACTGCAAACTCCGCCT...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAACTCTTCCAGCTGTGCTaGGACAGAATGTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKLFQLC*DRMSVS
Trigger: AGAGACTGACATTCTGTCTCAGCACAGCTGGAAGAG...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACGCACTCCAGCCGGGGTaGCAGAGCAGGACTCCATCT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHALQPG*QSRTPS
Trigger: AGATGGAGTCCTGCTCTGTCACCCCGGCTGGAGTGC...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CTCCAGGACCGTGGTTCTCAGCTCCAGCTGCACCACAAAGGCCCCTGGCAGCTTACCACTGAAAGCCCGTaGCTGTTAAATCCATACCAC +
Preference number: 4 (lower is better)
Translates to: LQDRGSQLQLHHKGPWQLTTESP*LLNPYH
Trigger: GTGGTATGGATTTAACAGTCACGGGCTTTCAGTGGT...AAGCTGCCAGGGGCCTTTGTGGTGCAGCTGGAGCTGAGAACCACGGTCCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571288.6
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACAGGACTGCCGGCCTGTaGACTCTCCGCAAGCCATCC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHRTAGL*TLRKPS
Trigger: GGATGGCTTGCGGAGAGTGCACAGGCCGGCAGTCCT...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCTCTCCTTCAGTGCACTaGTCTTCCTGGAGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFSPSVH*SSWSKE
Trigger: TTCCTTACTCCAGGAAGAGCAGTGCACTGAAGGAGA...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCCCGGGAGACAGAGGTTaGAGTGAGCTGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGPGDRG*SELRSC
Trigger: GCATGATCTCAGCTCACTGCAACCTCTGTCTCCCGG...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAACTGAGGCAGAAGAATTaGTTGAACCCGGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKLRQKN*LNPGDR
Trigger: TCTGTCTCCCGGGTTCAAGCAATTCTTCTGCCTCAG...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTATGATCACAGCATCCTaGGCCCGCTTTTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFMITAS*ARFFRC
Trigger: ACACCTGAAAAAGCGGGCCCAGGATGCTGTGATCAT...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp GTCCACGGCTTCCCCATGCTTGTCAAATCCTGCAGCAATTCCTACTGGATTTCGCGAACAGCCAGTCTGTaGGCTGACTCCGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: VHGFPMLVKSCSNSYWISRTASL*ADSGSS
Trigger: GCTGGACCCGGAGTCAGCCCACAGACTGGCTGTTCG...CGAAATCCAGTAGGAATTGCTGCAGGATTTGACAAGCATGGGGAAGCCGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571288.6
CDS-3UTR CCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCGGACCTGCAGTATCTTaGCAGGGCCTATGGCAAACC +
Preference number: 4 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGGPAVS*QGLWQT
Trigger: GGTTTGCCATAGGCCCTGCCAAGATACTGCAGGTCC...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCGGTCTGGCCAGCATGTaGTTCCTTTTGCCCATTCCC +
Preference number: 4 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGGLASM*FLLPIP
Trigger: GGGAATGGGCAAAAGGAACCACATGCTGGCCAGACC...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGCGCTGGCACCTGACGTaGCATGTCGGAGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLRWHLT*HVGAQA
Trigger: AGCCTGGGCTCCGACATGCCACGTCAGGTGCCAGCG...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp TATCTCAACAAAACCAAAGCCCATCTTATAAAGTCCGTCCACGGCTTCCCCATGAGCCAGTCTGTGGGCTaGCTCCGGGTCCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: YLNKTKAHLIKSVHGFPMSQSVG*LRVQQP
Trigger: GGGCTGCTGGACCCGGAGTCAGCCCACAGACTGGCT...CATGGGGAAGCCGTGGACGGACTTTATAAGATGGGCTTTGGTTTTGTTGAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571288.6
CDS-3UTR TCA 90 bp AGGAGACTGGTAGGCAAGATGTGTAGGGGCCTTCCTCCAGGACCGTGGTTCTCAAGCATGTCAGAGTCTTaGAATCTGGCCCGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: RRLVGKMCRGLPPGPWFSSMSES*NLARGR
Trigger: CCTTCCACGGGCCAGATTTCAAGACTCTGACATGCT...TGAGAACCACGGTCCTGGAGGAAGGCCCCTACACATCTTGCCTACCAGTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571288.6
CDS-3UTR TCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTACCACTGAAAGCCCGTaGCTGTTAAATCCATACCTG +
Preference number: 4 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFTTESP*LLNPYL
Trigger: CAGGTATGGATTTAACAGTCACGGGCTTTCAGTGGT...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCGACCGAGGCCCAGCATaGACCATGCCACATAAGAAT +
Preference number: 4 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGDRGPA*TMPHKN
Trigger: ATTCTTATGTGGCATGGTTCATGCTGGGCCTCGGTC...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATAGAGGCGGCCAGATCATaGGGTCAGGAGATCGAACCA +
Preference number: 4 (lower is better)
Translates to: VPSVAVSTVGNGQLENLIEAARS*GQEIEP
Trigger: TGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTC...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTTCTCCAGCGCGTCCTaGCCGCTGCTCACACCACCA +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLFSSAS*PLLTPP
Trigger: TGGTGGTGTGAGCAGCGGGCAGGACGCGCTGGAGAA...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCTCAGAATGTGAAACATaGCAGCCCCTCAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGSECET*QPLSPA
Trigger: AGCTGGGCTGAGGGGCTGGCATGTTTCACATTCTGA...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCAGTGAGCTGAGATCATaGCACTGCACTCTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLSELRS*HCTLAW
Trigger: CCAGGCTAGAGTGCAGTGGCATGATCTCAGCTCACT...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CACTTCCTCAGGAGACTGGTAGGCAAGATGTGTAGGGGCCTTCCTCCAGGACCGAGGATCTCACACCCCTaGTCACCTATAGGATTCACC +
Preference number: 4 (lower is better)
Translates to: HFLRRLVGKMCRGLPPGPRISHP*SPIGFT
Trigger: GGTGAATCCTATAGGTGAGCAGGGGTGTGAGATCCT...CGGTCCTGGAGGAAGGCCCCTACACATCTTGCCTACCAGTCTCCTGAGGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571288.6
CDS-3UTR CCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATATTGAAATCTGGCCCGTaGAAGGAGCCCCAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: VPSVAVSTVGNGQLENLILKSGP*KEPQGG
Trigger: ACCTCCCTGGGGCTCCTTCCACGGGCCAGATTTCAA...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTCTCCTGCAGCACCTTaGTCAGCAGGCGGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLSPAAP*SAGGAA
Trigger: AGCTGCGCCGCCTGCTGACCAAGGTGCTGCAGGAGA...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCATGGGAACTCGGCCTTaGGTGAGTGCATACATCTCC +
Preference number: 4 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLMGTRP*VSAYIS
Trigger: GGAGATGTATGCACTCACCCAAGGCCGAGTTCCCAT...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219240.9
CDS-3UTR CCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATACATGGCTGGGGGACATaGCTCAAGATGGAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: VPSVAVSTVGNGQLENLIHGWGT*LKMESL
Trigger: GAGGGACTCCATCTTGAGCCATGTCCCCCAGCCATG...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCATCTGTCGCCCAAGCTaGAGTGCACTGGTGCAATCT +
Preference number: 4 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGICRPS*SALVQS
Trigger: AGATTGCACCAGTGCACTCCAGCTTGGGCGACAGAT...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATATCCACGCAGGGGGACTaGACAATCAGCCGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VPSVAVSTVGNGQLENLISTQGD*TISRFS
Trigger: AGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGA...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATACCAGAGTATGTGCGCTaGCACCTGACGTGGCATGTC +
Preference number: 4 (lower is better)
Translates to: VPSVAVSTVGNGQLENLIPEYVR*HLTWHV
Trigger: GACATGCCACGTCAGGTGCCAGCGCACATACTCTGG...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGCTCCGCGGCGTCCACTaGGGTCTTGTTCTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLLRGVH*GLVLPQ
Trigger: TTGGGGAAGAACAAGACCTCAGTGGACGCCGCGGAG...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATAAGTGTTCAGTGGACATaGGCTGCCTTCAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: VPSVAVSTVGNGQLENLISVQWT*AAFRAA
Trigger: AGCTGCCCTGAAGGCAGCTCATGTCCACTGAACACT...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp GCAGATAGCAGAGGCCTGGATGGACCTGCAGTATCTTGGCAGGGCCTATGGCAAGAAAGGGAGGGCAGATaGCTCACAGAGAGCATCAAA +
Preference number: 4 (lower is better)
Translates to: ADSRGLDGPAVSWQGLWQEREGR*LTESIK
Trigger: TTTGATGCTCTCTGTGAGTCATCTGCCCTCCCTTTC...TTGCCATAGGCCCTGCCAAGATACTGCAGGTCCATCCAGGCCTCTGCTATCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp GAGCAGGATCTCACACCCCTGCTCACCTATAGGATTCACCAAGTACCATCATCCTCTCAGATGTGGCGGTaGAACTGGTCTGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: EQDLTPLLTYRIHQVPSSSQMWR*NWSGTR
Trigger: CCTGGTGCCAGACCAGTTTCACCGCCACATCTGAGA...GGATGATGGTACTTGGTGAATCCTATAGGTGAGCAGGGGTGTGAGATCCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571288.6
CDS-3UTR GCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCCCATTCAGCACAACATaGTCTATGACCACACCGCTG +
Preference number: 4 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLPFSTT*SMTTPL
Trigger: CAGCGGTGTGGTCATAGAGCATGTTGTGCTGAATGG...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACTTGAAATCTGGCCCGTaGAAGGAGCCCCAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHLKSGP*KEPQGG
Trigger: ACCTCCCTGGGGCTCCTTCCACGGGCCAGATTTCAA...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATACAGAGTCTTGAAATCTaGCCCGTGGAAGGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: VPSVAVSTVGNGQLENLIQSLEI*PVEGAP
Trigger: TGGGGCTCCTTCCACGGGCCAGATTTCAAGACTCTG...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACCGGCAGTGTTGGGGCTaGACACATTCACCACCAGGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHRQCWG*THSPPG
Trigger: ACCTGGTGGTGAATGTGTCCAGCCCCAACACTGCCG...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCTTGCTGTCTCCACGGTaGGAAATGGGCAGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLLLSPR*EMGSLK
Trigger: TTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAA...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp ACATCTTTATGCAGGGGAAAAGTCTGGGAGGACAGACAGAAAGGCATGTCTGCACCCTTCCACCATCCTTaGTCCCAGAGGGAGACGCGG +
Preference number: 4 (lower is better)
Translates to: TSLCRGKVWEDRQKGMSAPFHHP*SQRETR
Trigger: CCGCGTCTCCCTCTGGGACCAAGGATGGTGGAAGGG...TGCAGACATGCCTTTCTGTCTGTCCTCCCAGACTTTTCCCCTGCATAAAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATATTCCATTGGAGGAGATaGTGGCGGCCCCTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: VPSVAVSTVGNGQLENLIFHWRR*WRPLLS
Trigger: AGACAAGAGGGGCCGCCACCATCTCCTCCAATGGAA...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572887.5
CDS-3UTR TCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATAAGCATGTCAGAGTCTTaGAATCTGGCCCGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: VPSVAVSTVGNGQLENLISMSES*NLARGR
Trigger: CCTTCCACGGGCCAGATTTCAAGACTCTGACATGCT...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCCTAGGGTTTCCTTCCTaGGGTTTTGGAGTCACACTT +
Preference number: 4 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLLGFPS*GFGVTL
Trigger: AAGTGTGACTCCAAAACCTCAGGAAGGAAACCCTAG...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACTGTTCTTCCCCAAGTTaGCCCCCAGAGGCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHCSSPS*PPEAVH
Trigger: ATGGACTGCCTCTGGGGGTCAACTTGGGGAAGAACA...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACCCTTATCCTGGCTGGTaGGGTCAGGAGCGATCTTCA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHPYPGW*GQERSS
Trigger: TGAAGATCGCTCCTGACCTCACCAGCCAGGATAAGG...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCATCTCCCGAATGGTTTaGGTTGATAAATCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGISRMV*VDKSRR
Trigger: CCTCCGGGATTTATCAACTCAAACCATTCGGGAGAT...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGTTTGTTTTGTGTGTaGCAGAGTCTTGATCTGTCG +
Preference number: 4 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKCLFCV*QSLDLS
Trigger: CGACAGATCAAGACTCTGTCACACACAAAACAAACA...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGGCACAACATGCTCTATaGCCACACCGCTGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLAQHAL*PHRWAR
Trigger: TCGAGCCCAGCGGTGTGGTCATAGAGCATGTTGTGC...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGAGCACTTTGGGAGACTaGGGCGGCCAGATCATGAGG +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLSTLGD*GGQIMR
Trigger: CCTCATGATCTGGCCGCCTCAGTCTCCCAAAGTGCT...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCTTATGGGAACTTGGGTaGGTGCATACATCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLLWELG*VHTSPE
Trigger: TTCGGGAGATGTATGCACTCACCCAAGTTCCCATAA...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572887.5
CDS-3UTR GCA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCATGCTTGTCAAATCCTaGAGCAATTCCTACTGGATT +
Preference number: 4 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFMLVKS*SNSYWI
Trigger: AATCCAGTAGGAATTGCTGCAGGATTTGACAAGCAT...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGACTCCGCCAAAGCCCTaGTCTTTCAGAAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLTPPKP*SFRRAS
Trigger: GGAGGCCCTTCTGAAAGAGCAGGGCTTTGGCGGAGT...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACTTTACAGTGCAGCCATaGCATGGCTGGGGGACATGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHFTVQP*HGWGTW
Trigger: CCATGTCCCCCAGCCATGGCATGGCTGCACTGTAAA...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCTCTCCTTCAGTGCACTaGTCTTCCTGGAGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLSPSVH*SSWSKE
Trigger: TTCCTTACTCCAGGAAGAGCAGTGCACTGAAGGAGA...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTTGCAGCAATTCCTACTaGATTTCGGAATTTATGGCC +
Preference number: 4 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFCSNSY*ISEFMA
Trigger: GGCCATAAATTCCGAAATCCAGTAGGAATTGCTGCA...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CCAGCTGCACCACAAAGGCCCCTGGCAGCTTTCAGGTCCTGCTCTCAGATGTGGTGCAGCAATTCCTACTaGATTTCGGAATTTATGGCC +
Preference number: 4 (lower is better)
Translates to: PAAPQRPLAAFRSCSQMWCSNSY*ISEFMA
Trigger: GGCCATAAATTCCGAAATCCAGTAGGAATTGCTGCA...CCACATCTGAGAGCAGGACCTGAAAGCTGCCAGGGGCCTTTGTGGTGCAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571288.6
CDS-3UTR CCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTTCACCATGGTGGCCTaGCTGGTCTCCAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLFTMVA*LVSNSW
Trigger: CCAGGAGTTGGAGACCAGCCAGGCCACCATGGTGAA...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp GAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTACCGTTTGAATTGCTAGTAAGCCAGTCTGTGGGCTaGCTCCGGGTCCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: EEQECLHFKSAVPFELLVSQSVG*LRVQQP
Trigger: GGGCTGCTGGACCCGGAGTCAGCCCACAGACTGGCT...TACTAGCAATTCAAACGGTACAGCACTCTTGAAGTGTAAACATTCCTGTTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGGCAGTCCATCTTCTGTaGGCTTGGCCTGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLAVHLL*AWPASA
Trigger: AGCAGAAGCAGGCCAAGCTCACAGAAGATGGACTGC...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGGAACTCGGCCTTGGGTaGGTGCATACATCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLELGLG*VHTSPE
Trigger: TTCGGGAGATGTATGCACTCACCCAAGGCCGAGTTC...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219240.9
CDS-3UTR TCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCATGTCCTTGCAAGACTaGTGGATCCTAGGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLMSLQD*WILGFE
Trigger: TTCAAACCCTAGGATCCATCAGTCTTGCAAGGACAT...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCAGCCACATGTATGTCTaGGTGTATGTACAAAATGAA +
Preference number: 4 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFSHMYV*VYVQNE
Trigger: TTCATTTTGTACATACACTCAGACATACATGTGGCT...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp ACATCTTTATGCAGGGGAAAAGTCTGGGAGGACAGACAGAAAGGCATGTCTGCAGAGGCGGCCAGATCATaGGGTCAGGAGATCGAACCA +
Preference number: 4 (lower is better)
Translates to: TSLCRGKVWEDRQKGMSAEAARS*GQEIEP
Trigger: TGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTC...TGCAGACATGCCTTTCTGTCTGTCCTCCCAGACTTTTCCCCTGCATAAAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGCAGGATTCCCAGCATTaGGAGCTGCTCTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLQDSQH*ELLWCL
Trigger: CAGACACCAGAGCAGCTCTCAATGCTGGGAATCCTG...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAAATGCTTGTCAAATCCTaGAGCAATTCCTACTGGATT +
Preference number: 4 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKMLVKS*SNSYWI
Trigger: AATCCAGTAGGAATTGCTGCAGGATTTGACAAGCAT...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp GAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTACCGTTTGAATTGCTAGTAAGGGCCGTGTACAGCTaGACCAGGGAGGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: EEQECLHFKSAVPFELLVRAVYS*TREAPA
Trigger: GGCAGGGGCCTCCCTGGTGCAGCTGTACACGGCCCT...TACTAGCAATTCAAACGGTACAGCACTCTTGAAGTGTAAACATTCCTGTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATATCACCTCCGATGATCTaGTCCAATGGCATCTGTGAC +
Preference number: 4 (lower is better)
Translates to: VPSVAVSTVGNGQLENLISPPMI*SNGICD
Trigger: GTCACAGATGCCATTGGAGCAGATCATCGGAGGTGA...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGGATTGGCGTTTACAGTaGAGCCATGCCATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLDWRLQ*SHAMAG
Trigger: CCCAGCCATGGCATGGCTGCACTGTAAACGCCAATC...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp ACATCTTTATGCAGGGGAAAAGTCTGGGAGGACAGACAGAAAGGCATGTCTGCAAGGCCTGGATGGACCTaGAGTATCTTGGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: TSLCRGKVWEDRQKGMSARPGWT*SILAGP
Trigger: AGGCCCTGCCAAGATACTGCAGGTCCATCCAGGCCT...TGCAGACATGCCTTTCTGTCTGTCCTCCCAGACTTTTCCCCTGCATAAAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCGCCCAGCATGAACCATaGCACATAAGAATAGTGAAG +
Preference number: 4 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLAQHEP*HIRIVK
Trigger: CTTCACTATTCTTATGTGGCATGGTTCATGCTGGGC...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp GCAGATAGCAGAGGCCTGGATGGACCTGCAGTATCTTGGCAGGGCCTATGGCAAGCATGTGGTTCCTTTTaGCCATTCCCATTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: ADSRGLDGPAVSWQGLWQACGSF*PFPFLL
Trigger: AAGGAGAAATGGGAATGGGCAAAAGGAACCACATGC...TTGCCATAGGCCCTGCCAAGATACTGCAGGTCCATCCAGGCCTCTGCTATCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGCAGAGTCTTGAAATCTaGCCCGTGGAAGGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLQSLEI*PVEGAP
Trigger: TGGGGCTCCTTCCACGGGCCAGATTTCAAGACTCTG...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCTCCTTCCTGAGGTTTTaGAGTCACACTTCCTATCTC +
Preference number: 4 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGSFLRF*SHTSYL
Trigger: GAGATAGGAAGTGTGACTCCAAAACCTCAGGAAGGA...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACCTGTTAATGACAGCTTaGTCCTCAGGGAGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHLLMTA*SSGRRK
Trigger: CTTCCGCCTCCCTGAGGACCAAGCTGTCATTAACAG...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGATGTCCTCCTTATCCTaGCTGGTGAGGTCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLMSSLS*LVRSGA
Trigger: CGCTCCTGACCTCACCAGCCAGGATAAGGAGGACAT...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATATTGCTGTCTCCACGGTaGGAAATGGGCAGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: VPSVAVSTVGNGQLENLILLSPR*EMGSLK
Trigger: TTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAA...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp GCAGATAGCAGAGGCCTGGATGGACCTGCAGTATCTTGGCAGGGCCTATGGCAACCAATTATGGGAACTTaGGTGAGTGCATACATCTCC +
Preference number: 4 (lower is better)
Translates to: ADSRGLDGPAVSWQGLWQPIMGT*VSAYIS
Trigger: GGAGATGTATGCACTCACCCAAGTTCCCATAATTGG...TTGCCATAGGCCCTGCCAAGATACTGCAGGTCCATCCAGGCCTCTGCTATCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572887.5
CDS-3UTR TCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATACTAGGGTTTCCTTCCTaGGGTTTTGGAGTCACACTT +
Preference number: 4 (lower is better)
Translates to: VPSVAVSTVGNGQLENLILGFPS*GFGVTL
Trigger: AAGTGTGACTCCAAAACCTCAGGAAGGAAACCCTAG...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCTGTTTGTTTTGTGTGTaGCAGAGTCTTGATCTGTCG +
Preference number: 4 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLCLFCV*QSLDLS
Trigger: CGACAGATCAAGACTCTGTCACACACAAAACAAACA...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGAGACAGAGGTTGCAGTaGGCTGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLRQRLQ*AEIMPL
Trigger: CAGTGGCATGATCTCAGCTCACTGCAACCTCTGTCT...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTCCACGGCTTCCCCATaGTTGTCAAATCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLSTASP*LSNPAA
Trigger: TGCTGCAGGATTTGACAAGCATGGGGAAGCCGTGGA...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp GAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTACCGTTTGAATTGCTAGTAGCGCGTCCTGCCCGCTaGTCACACCACCAACCCCAA +
Preference number: 4 (lower is better)
Translates to: EEQECLHFKSAVPFELLVARPAR*SHHQPQ
Trigger: TTGGGGTTGGTGGTGTGAGCAGCGGGCAGGACGCGC...TACTAGCAATTCAAACGGTACAGCACTCTTGAAGTGTAAACATTCCTGTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACTCACCTCCGATGATCTaGTCCAATGGCATCTGTGAC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHSPPMI*SNGICD
Trigger: GTCACAGATGCCATTGGAGCAGATCATCGGAGGTGA...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACCTGAGGCAGAAGAATTaGTTGAACCCGGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHLRQKN*LNPGDR
Trigger: TCTGTCTCCCGGGTTCAAGCAATTCTTCTGCCTCAG...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CTTCCTGAGGTTTTGGAGTCACACTTCCTATCTCAACAAAACCAAAGCCCATCTGTTCTCAGCTCCAGCTaGACCACAAAGGCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LPEVLESHFLSQQNQSPSVLSSS*TTKAPG
Trigger: GCCAGGGGCCTTTGTGGTGCAGCTGGAGCTGAGAAC...AGATGGGCTTTGGTTTTGTTGAGATAGGAAGTGTGACTCCAAAACCTCAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571288.6
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACATGATCACAGCATCCTaGGCCCGCTTTTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHMITAS*ARFFRC
Trigger: ACACCTGAAAAAGCGGGCCCAGGATGCTGTGATCAT...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp TCAGATGTGGCGGTGAAACTGGTCTGGCACCAGGCCAGGGCATCTGAATATTCCGGATTTCGGAATTTATaGCCCAGAACTCTCACTTCC +
Preference number: 4 (lower is better)
Translates to: SDVAVKLVWHQARASEYSGFRNL*PRTLTS
Trigger: GGAAGTGAGAGTTCTGGGCCATAAATTCCGAAATCC...GGAATATTCAGATGCCCTGGCCTGGTGCCAGACCAGTTTCACCGCCACATCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571288.6
CDS-3UTR CCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCTGCAGCAATTCCTACTaGATTTCGGAATTTATGGCC +
Preference number: 4 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGCSNSY*ISEFMA
Trigger: GGCCATAAATTCCGAAATCCAGTAGGAATTGCTGCA...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp ACATCTTTATGCAGGGGAAAAGTCTGGGAGGACAGACAGAAAGGCATGTCTGCAATGTCCTCCTTATCCTaGCTGGTGAGGTCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: TSLCRGKVWEDRQKGMSAMSSLS*LVRSGA
Trigger: CGCTCCTGACCTCACCAGCCAGGATAAGGAGGACAT...TGCAGACATGCCTTTCTGTCTGTCCTCCCAGACTTTTCCCCTGCATAAAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACGGACATGGCTCAAGATaGAGTCCCTCCTCTCATGAT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHGHGSR*SPSSHD
Trigger: ATCATGAGAGGAGGGACTCCATCTTGAGCCATGTCC...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp ACATCTTTATGCAGGGGAAAAGTCTGGGAGGACAGACAGAAAGGCATGTCTGCAGGACCTGCAGTATCTTaGCAGGGCCTATGGCAAACC +
Preference number: 4 (lower is better)
Translates to: TSLCRGKVWEDRQKGMSAGPAVS*QGLWQT
Trigger: GGTTTGCCATAGGCCCTGCCAAGATACTGCAGGTCC...TGCAGACATGCCTTTCTGTCTGTCCTCCCAGACTTTTCCCCTGCATAAAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGATCTGTCGCCCAAGCTaGAGTGCACTGGTGCAATCT +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLICRPS*SALVQS
Trigger: AGATTGCACCAGTGCACTCCAGCTTGGGCGACAGAT...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp ACATCTTTATGCAGGGGAAAAGTCTGGGAGGACAGACAGAAAGGCATGTCTGCAAGAGCAGCCAAGGCTTaGTCCATGGCAGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: TSLCRGKVWEDRQKGMSARAAKA*SMAEPF
Trigger: GAATGGCTCTGCCATGGACCAAGCCTTGGCTGCTCT...TGCAGACATGCCTTTCTGTCTGTCCTCCCAGACTTTTCCCCTGCATAAAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp GAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTACCGTTTGAATTGCTAGTACGCTGGCACCTGACGTaGCATGTCGGAGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: EEQECLHFKSAVPFELLVRWHLT*HVGAQA
Trigger: AGCCTGGGCTCCGACATGCCACGTCAGGTGCCAGCG...TACTAGCAATTCAAACGGTACAGCACTCTTGAAGTGTAAACATTCCTGTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGGTAATCTCAGCACTTTaGGAGACTGAGGCGGCCAGA +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLVISAL*ETEAAR
Trigger: TCTGGCCGCCTCAGTCTCCCAAAGTGCTGAGATTAC...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp AGGAGACTGGTAGGCAAGATGTGTAGGGGCCTTCCTCCAGGACCGTGGTTCTCAATGCTTGTCAAATCCTaGAGCAATTCCTACTGGATT +
Preference number: 4 (lower is better)
Translates to: RRLVGKMCRGLPPGPWFSMLVKS*SNSYWI
Trigger: AATCCAGTAGGAATTGCTGCAGGATTTGACAAGCAT...TGAGAACCACGGTCCTGGAGGAAGGCCCCTACACATCTTGCCTACCAGTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571288.6
CDS-3UTR GCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCGGGATTAAAAGTGCCTaGCACAATATCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGGIKSA*HNIWLI
Trigger: AATTAGCCAGATATTGTGGCAGGCACTTTTAATCCC...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp GCAGATAGCAGAGGCCTGGATGGACCTGCAGTATCTTGGCAGGGCCTATGGCAAAAGCAAAGACAATTATaGACTCCACACAAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: ADSRGLDGPAVSWQGLWQKQRQL*TPHKSE
Trigger: CTCACTCTTGTGTGGAGTGCATAATTGTCTTTGCTT...TTGCCATAGGCCCTGCCAAGATACTGCAGGTCCATCCAGGCCTCTGCTATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp GCGGAAGACTCTGGGTCTAGGGTTTCCTTCCTGAGGTTTTGGAGTCACACTTCCTCCTTCCTGAGGTTTTaGAGTCACACTTCCTATCTC +
Preference number: 4 (lower is better)
Translates to: AEDSGSRVSFLRFWSHTSSFLRF*SHTSYL
Trigger: GAGATAGGAAGTGTGACTCCAAAACCTCAGGAAGGA...GGAAGTGTGACTCCAAAACCTCAGGAAGGAAACCCTAGACCCAGAGTCTTCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571288.6
CDS-3UTR CCA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCCAAAAATGCAGTTTATaGTCTGACCAAGGGACTGAA +
Preference number: 4 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGQKCSL*SDQGTE
Trigger: TTCAGTCCCTTGGTCAGACCATAAACTGCATTTTTG...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGCAGATAGCAGAGGCCTaGATGGACCTGCAGTATCTT +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLQIAEA*MDLQYL
Trigger: AAGATACTGCAGGTCCATCCAGGCCTCTGCTATCTG...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp ACATCTTTATGCAGGGGAAAAGTCTGGGAGGACAGACAGAAAGGCATGTCTGCAGTGCACTGCTCTTCCTaGAGTAAGGAACGAATCCGG +
Preference number: 4 (lower is better)
Translates to: TSLCRGKVWEDRQKGMSAVHCSS*SKERIR
Trigger: CCGGATTCGTTCCTTACTCCAGGAAGAGCAGTGCAC...TGCAGACATGCCTTTCTGTCTGTCCTCCCAGACTTTTCCCCTGCATAAAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp GAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTACCGTTTGAATTGCTAGTACCCTTCCACCATCCTTaGTCCCAGAGGGAGACGCGG +
Preference number: 4 (lower is better)
Translates to: EEQECLHFKSAVPFELLVPFHHP*SQRETR
Trigger: CCGCGTCTCCCTCTGGGACCAAGGATGGTGGAAGGG...TACTAGCAATTCAAACGGTACAGCACTCTTGAAGTGTAAACATTCCTGTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp GAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTACCGTTTGAATTGCTAGTAGATCTTCACCAGGACTaGCGGCCTGTGCACTCTCCG +
Preference number: 4 (lower is better)
Translates to: EEQECLHFKSAVPFELLVDLHQD*RPVHSP
Trigger: CGGAGAGTGCACAGGCCGGCAGTCCTGGTGAAGATC...TACTAGCAATTCAAACGGTACAGCACTCTTGAAGTGTAAACATTCCTGTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACGCCCAGCATGAACCATaGCACATAAGAATAGTGAAG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHAQHEP*HIRIVK
Trigger: CTTCACTATTCTTATGTGGCATGGTTCATGCTGGGC...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp CTTCCTGAGGTTTTGGAGTCACACTTCCTATCTCAACAAAACCAAAGCCCATCTCAGAGTCTTGAAATCTaGCCCGTGGAAGGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LPEVLESHFLSQQNQSPSQSLEI*PVEGAP
Trigger: TGGGGCTCCTTCCACGGGCCAGATTTCAAGACTCTG...AGATGGGCTTTGGTTTTGTTGAGATAGGAAGTGTGACTCCAAAACCTCAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571288.6
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACGGATTTCGGAATTTATaGCCCAGAACTCTCACTTCC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHGFRNL*PRTLTS
Trigger: GGAAGTGAGAGTTCTGGGCCATAAATTCCGAAATCC...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp ACATCTTTATGCAGGGGAAAAGTCTGGGAGGACAGACAGAAAGGCATGTCTGCAGACAACTCCTTATCCTaGTGCTCAAGCAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TSLCRGKVWEDRQKGMSADNSLS*CSSSLF
Trigger: GAAGAGGCTGCTTGAGCACCAGGATAAGGAGTTGTC...TGCAGACATGCCTTTCTGTCTGTCCTCCCAGACTTTTCCCCTGCATAAAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCGATGTAAATAACATTTaGAATTCTGCACACCCTTCC +
Preference number: 4 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLDVNNI*NSAHPS
Trigger: GGAAGGGTGTGCAGAATTCCAAATGTTATTTACATC...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp GCAGATAGCAGAGGCCTGGATGGACCTGCAGTATCTTGGCAGGGCCTATGGCAAGATGTAAATAACATTTaGAATTCTGCACACCCTTCC +
Preference number: 4 (lower is better)
Translates to: ADSRGLDGPAVSWQGLWQDVNNI*NSAHPS
Trigger: GGAAGGGTGTGCAGAATTCCAAATGTTATTTACATC...TTGCCATAGGCCCTGCCAAGATACTGCAGGTCCATCCAGGCCTCTGCTATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGATGTCCTTGCAAGACTaGTGGATCCTAGGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLMSLQD*WILGFE
Trigger: TTCAAACCCTAGGATCCATCAGTCTTGCAAGGACAT...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp CTTCCTGAGGTTTTGGAGTCACACTTCCTATCTCAACAAAACCAAAGCCCATCTTCCACGGCTTCCCCATaGTTGTCAAATCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LPEVLESHFLSQQNQSPSSTASP*LSNPAA
Trigger: TGCTGCAGGATTTGACAAGCATGGGGAAGCCGTGGA...AGATGGGCTTTGGTTTTGTTGAGATAGGAAGTGTGACTCCAAAACCTCAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571288.6
CDS-3UTR GCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATAAAACAGATAACAGTGTaGATTCCATCCAGAAATCGG +
Preference number: 4 (lower is better)
Translates to: VPSVAVSTVGNGQLENLIKQITV*IPSRNR
Trigger: CCGATTTCTGGATGGAATGCACACTGTTATCTGTTT...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTCCTTCCTGAGGTTTTaGAGTCACACTTCCTATCTC +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLSFLRF*SHTSYL
Trigger: GAGATAGGAAGTGTGACTCCAAAACCTCAGGAAGGA...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATACATACATCTCCCGAATaGTTTGAGTTGATAAATCCC +
Preference number: 4 (lower is better)
Translates to: VPSVAVSTVGNGQLENLIHTSPE*FELINP
Trigger: GGGATTTATCAACTCAAACCATTCGGGAGATGTATG...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp GAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTACCGTTTGAATTGCTAGTATCCACGCAGGGGGACTaGACAATCAGCCGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: EEQECLHFKSAVPFELLVSTQGD*TISRFS
Trigger: AGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGA...TACTAGCAATTCAAACGGTACAGCACTCTTGAAGTGTAAACATTCCTGTTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGGAGTGCTGTACCGTTTaGATTGCTAGTAAAGAATGC +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLECCTV*IASKEC
Trigger: GCATTCTTTACTAGCAATTCAAACGGTACAGCACTC...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp ACATCTTTATGCAGGGGAAAAGTCTGGGAGGACAGACAGAAAGGCATGTCTGCAGCATGTGGTTCCTTTTaGCCATTCCCATTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: TSLCRGKVWEDRQKGMSAACGSF*PFPFLL
Trigger: AAGGAGAAATGGGAATGGGCAAAAGGAACCACATGC...TGCAGACATGCCTTTCTGTCTGTCCTCCCAGACTTTTCCCCTGCATAAAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp GAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTACCGTTTGAATTGCTAGTAGCTTGCCTGAGTCCTTaGGAAGGTTCCAGATCAGGC +
Preference number: 4 (lower is better)
Translates to: EEQECLHFKSAVPFELLVACLSP*EGSRSG
Trigger: GCCTGATCTGGAACCTTCCCAAGGACTCAGGCAAGC...TACTAGCAATTCAAACGGTACAGCACTCTTGAAGTGTAAACATTCCTGTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp GAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTACCGTTTGAATTGCTAGTAAGCATGTCAGAGTCTTaGAATCTGGCCCGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: EEQECLHFKSAVPFELLVSMSES*NLARGR
Trigger: CCTTCCACGGGCCAGATTTCAAGACTCTGACATGCT...TACTAGCAATTCAAACGGTACAGCACTCTTGAAGTGTAAACATTCCTGTTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CTTCCTGAGGTTTTGGAGTCACACTTCCTATCTCAACAAAACCAAAGCCCATCTCTAGGGTTTCCTTCCTaGGGTTTTGGAGTCACACTT +
Preference number: 4 (lower is better)
Translates to: LPEVLESHFLSQQNQSPSLGFPS*GFGVTL
Trigger: AAGTGTGACTCCAAAACCTCAGGAAGGAAACCCTAG...AGATGGGCTTTGGTTTTGTTGAGATAGGAAGTGTGACTCCAAAACCTCAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571288.6
CDS-3UTR TCA 90 bp GAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTACCGTTTGAATTGCTAGTACGATGCCCAACTCTTTaGCCACACTGGCAATGTCCT +
Preference number: 4 (lower is better)
Translates to: EEQECLHFKSAVPFELLVRCPTL*PHWQCP
Trigger: AGGACATTGCCAGTGTGGTCAAAGAGTTGGGCATCG...TACTAGCAATTCAAACGGTACAGCACTCTTGAAGTGTAAACATTCCTGTTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACATGGATCCTAGGGTTTaGATCCACAAAGAATCAAAA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHMDPRV*IHKESK
Trigger: TTTTGATTCTTTGTGGATTCAAACCCTAGGATCCAT...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp TGTCTGCAGAGTGGGGTGAGGAGGAACAGGAATGTTTACACTTCAAGAGTGCTGAAACAGATAACAGTGTaGATTCCATCCAGAAATCGG +
Preference number: 4 (lower is better)
Translates to: CLQSGVRRNRNVYTSRVLKQITV*IPSRNR
Trigger: CCGATTTCTGGATGGAATGCACACTGTTATCTGTTT...CAGCACTCTTGAAGTGTAAACATTCCTGTTCCTCCTCACCCCACTCTGCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR GCA 90 bp ACATCTTTATGCAGGGGAAAAGTCTGGGAGGACAGACAGAAAGGCATGTCTGCAAAGCAAAGACAATTATaGACTCCACACAAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: TSLCRGKVWEDRQKGMSAKQRQL*TPHKSE
Trigger: CTCACTCTTGTGTGGAGTGCATAATTGTCTTTGCTT...TGCAGACATGCCTTTCTGTCTGTCCTCCCAGACTTTTCCCCTGCATAAAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp ACATCTTTATGCAGGGGAAAAGTCTGGGAGGACAGACAGAAAGGCATGTCTGCACATACATCTCCCGAATaGTTTGAGTTGATAAATCCC +
Preference number: 4 (lower is better)
Translates to: TSLCRGKVWEDRQKGMSAHTSPE*FELINP
Trigger: GGGATTTATCAACTCAAACCATTCGGGAGATGTATG...TGCAGACATGCCTTTCTGTCTGTCCTCCCAGACTTTTCCCCTGCATAAAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp GAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTACCGTTTGAATTGCTAGTAGACAACTCCTTATCCTaGTGCTCAAGCAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: EEQECLHFKSAVPFELLVDNSLS*CSSSLF
Trigger: GAAGAGGCTGCTTGAGCACCAGGATAAGGAGTTGTC...TACTAGCAATTCAAACGGTACAGCACTCTTGAAGTGTAAACATTCCTGTTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CCA 90 bp GAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTACCGTTTGAATTGCTAGTAGGATTTCGGAATTTATaGCCCAGAACTCTCACTTCC +
Preference number: 4 (lower is better)
Translates to: EEQECLHFKSAVPFELLVGFRNL*PRTLTS
Trigger: GGAAGTGAGAGTTCTGGGCCATAAATTCCGAAATCC...TACTAGCAATTCAAACGGTACAGCACTCTTGAAGTGTAAACATTCCTGTTCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp GAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTACCGTTTGAATTGCTAGTAATGGATCCTAGGGTTTaGATCCACAAAGAATCAAAA +
Preference number: 4 (lower is better)
Translates to: EEQECLHFKSAVPFELLVMDPRV*IHKESK
Trigger: TTTTGATTCTTTGTGGATTCAAACCCTAGGATCCAT...TACTAGCAATTCAAACGGTACAGCACTCTTGAAGTGTAAACATTCCTGTTCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR TCA 90 bp GAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTACCGTTTGAATTGCTAGTAAGTGTATGTACAAAATaGACATCTTTATGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: EEQECLHFKSAVPFELLVSVCTK*TSLCRG
Trigger: TCCCCTGCATAAAGATGTTCATTTTGTACATACACT...TACTAGCAATTCAAACGGTACAGCACTCTTGAAGTGTAAACATTCCTGTTCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
3UTR CAA 72 bp GAATGTTTACACTTCAAGAGTGCTGTACCGTTTGAATaGCTAGTAAAGAATGCAGGTCAATTTTATAGTCAA +
Preference number: 4 (lower is better)
Translates to: ECLHFKSAVPFE*LVKNAGQFYSQ
Trigger: TTGACTATAAAATTGACCTGCATTCTTTACTAGCAATTCAAACGGTACAGCACTCTTGAAGTGTAAACATTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS GCA 90 bp CCCCCAGAAGGTGAGGGCCGTGTACAGCTGCACCAGGGAGGCCCCTaGCCGGATCTTCTCCAGCGCGTCCTGCCCGCTGCTCACACCACC +
Preference number: 5 (lower is better)
Translates to: PPEGEGRVQLHQGGP*PDLLQRVLPAAHTT
Trigger: GGTGGTGTGAGCAGCGGGCAGGACGCGCTGGAGAAGATCCGGGCAGGGGCCTCCCTGGTGCAGCTGTACACGGCCCTCACCTTCTGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219240.9
ENST00000571392.1
ENST00000572887.5
CDS GCA 90 bp TTGCCCACAACGGGTGGCCCCCAGAAGGTGAGGGCCGTGTACAGCTaGACCAGGGAGGCCCCTGCCCGGATCTTCTCCAGCGCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: LPTTGGPQKVRAVYS*TREAPARIFSSASC
Trigger: GCAGGACGCGCTGGAGAAGATCCGGGCAGGGGCCTCCCTGGTGCAGCTGTACACGGCCCTCACCTTCTGGGGGCCACCCGTTGTGGGCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219240.9
ENST00000571392.1
ENST00000572887.5
CDS CCA 90 bp GGCGCAGCTCGGCCTTTCCCTGAAGGCTCCGCAGCCCGGCAGTGTTaGGGCTGGACACATTCACCACCAGGTAGTCGGCCAGGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: GAARPFPEGSAARQC*GWTHSPPGSRPGGP
Trigger: TGGGCCCCCTGGCCGACTACCTGGTGGTGAATGTGTCCAGCCCCAACACTGCCGGGCTGCGGAGCCTTCAGGGAAAGGCCGAGCTGCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCCGCCGGGCAGAAGGGTaGAGAGGACGCCTCCGCGCA +
Preference number: 5 (lower is better)
Translates to: PSQAASTQGDWTISRFSARRAEG*RGRLRA
Trigger: TGCGCGGAGGCGTCCTCTCAACCCTTCTGCCCGGCG...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572887.5
CDS CCA 90 bp GCTCGGCCTTTCCCTGAAGGCTCCGCAGCCCGGCAGTGTTGGGGCTaGACACATTCACCACCAGGTAGTCGGCCAGGGGGCCCAGTACGC +
Preference number: 5 (lower is better)
Translates to: ARPFPEGSAARQCWG*THSPPGSRPGGPVR
Trigger: GCGTACTGGGCCCCCTGGCCGACTACCTGGTGGTGAATGTGTCCAGCCCCAACACTGCCGGGCTGCGGAGCCTTCAGGGAAAGGCCGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS TCA 90 bp TCCTGCAGCACCTTGGTCAGCAGGCGGCGCAGCTCGGCCTTTCCCTaGAGGCTCCGCAGCCCGGCAGTGTTGGGGCTGGACACATTCACC +
Preference number: 5 (lower is better)
Translates to: SCSTLVSRRRSSAFP*RLRSPAVLGLDTFT
Trigger: GGTGAATGTGTCCAGCCCCAACACTGCCGGGCTGCGGAGCCTTCAGGGAAAGGCCGAGCTGCGCCGCCTGCTGACCAAGGTGCTGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS GCA 90 bp AGCTGCACCAGGGAGGCCCCTGCCCGGATCTTCTCCAGCGCGTCCTaGCCGCTGCTCACACCACCAACCCCAATTATGGGAACTCGGCCT +
Preference number: 5 (lower is better)
Translates to: SCTREAPARIFSSAS*PLLTPPTPIMGTRP
Trigger: AGGCCGAGTTCCCATAATTGGGGTTGGTGGTGTGAGCAGCGGGCAGGACGCGCTGGAGAAGATCCGGGCAGGGGCCTCCCTGGTGCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219240.9
CDS GCA 90 bp AGCTGCACCAGGGAGGCCCCTGCCCGGATCTTCTCCAGCGCGTCCTaGCCGCTGCTCACACCACCAACCCCAATTATGGGAACTTGGGTG +
Preference number: 5 (lower is better)
Translates to: SCTREAPARIFSSAS*PLLTPPTPIMGTWV
Trigger: CACCCAAGTTCCCATAATTGGGGTTGGTGGTGTGAGCAGCGGGCAGGACGCGCTGGAGAAGATCCGGGCAGGGGCCTCCCTGGTGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572887.5
CDS GCA 90 bp CCAGGGAGGCCCCTGCCCGGATCTTCTCCAGCGCGTCCTGCCCGCTaGTCACACCACCAACCCCAATTATGGGAACTTGCCTTGGGTGAG +
Preference number: 5 (lower is better)
Translates to: PGRPLPGSSPARPAR*SHHQPQLWELALGE
Trigger: CTCACCCAAGGCAAGTTCCCATAATTGGGGTTGGTGGTGTGAGCAGCGGGCAGGACGCGCTGGAGAAGATCCGGGCAGGGGCCTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571392.1
CDS CCA 90 bp AGGGGCTTCCCACTCAGCCCTCCTGTTTCAGAGCGCAGGGCACCCTaGAGGCCCGCAGGGCGACTCACGGTGGTGTTCGTAACAATCAGC +
Preference number: 5 (lower is better)
Translates to: RGFPLSPPVSERRAP*RPAGRLTVVFVTIS
Trigger: GCTGATTGTTACGAACACCACCGTGAGTCGCCCTGCGGGCCTCCAGGGTGCCCTGCGCTCTGAAACAGGAGGGCTGAGTGGGAAGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219240.9
ENST00000571392.1
ENST00000572887.5
ENST00000573922.5
CDS GCA 90 bp TGGCTGGTGAGGTCAGGAGCGATCTTCACCAGGACTGCCGGCCTGTaGACTCTCCGCAAGCCATCCCTCTCCTGCAGCACCTTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: WLVRSGAIFTRTAGL*TLRKPSLSCSTLVS
Trigger: GCTGACCAAGGTGCTGCAGGAGAGGGATGGCTTGCGGAGAGTGCACAGGCCGGCAGTCCTGGTGAAGATCGCTCCTGACCTCACCAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS GCA 90 bp CGCAGACACTCAGATCAGCACCCACCCAGACCTGCAGGCGCTGTCTaGACACGCCTGACCGAGTCCACGTGCAAATGCACACGCACGAGC +
Preference number: 5 (lower is better)
Translates to: RRHSDQHPPRPAGAV*TRLTESTCKCTRTS
Trigger: GCTCGTGCGTGTGCATTTGCACGTGGACTCGGTCAGGCGTGTGCAGACAGCGCCTGCAGGTCTGGGTGGGTGCTGATCTGAGTGTCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576145.1
CDS GCA 90 bp AGCTGCACCAGGGAGGCCCCTGCCCGGATCTTCTCCAGCGCGTCCTaGCCGCTGCTCACACCACCAACCCCAATTATGGGAACTTGCCTT +
Preference number: 5 (lower is better)
Translates to: SCTREAPARIFSSAS*PLLTPPTPIMGTCL
Trigger: AAGGCAAGTTCCCATAATTGGGGTTGGTGGTGTGAGCAGCGGGCAGGACGCGCTGGAGAAGATCCGGGCAGGGGCCTCCCTGGTGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571392.1
CDS CCA 90 bp TTTCAGAAGGGCCTCCAGTTCCCGCTTGACTTTGCCCACAACGGGTaGCCCCCAGAAGGTGAGGGCCGTGTACAGCTGCACCAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: FQKGLQFPLDFAHNG*PPEGEGRVQLHQGG
Trigger: GCCTCCCTGGTGCAGCTGTACACGGCCCTCACCTTCTGGGGGCCACCCGTTGTGGGCAAAGTCAAGCGGGAACTGGAGGCCCTTCTGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219240.9
ENST00000571392.1
ENST00000572887.5
CDS-3UTR CAA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAACGCAGCCCGGCAGTGTaGGGGCTGGACACATTCACC +
Preference number: 5 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKRSPAV*GLDTFT
Trigger: GGTGAATGTGTCCAGCCCCAACACTGCCGGGCTGCG...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCAGTTCCCGCTTGACTTaGCCCACAACGGGTGGCCCC +
Preference number: 5 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFSSRLT*PTTGGP
Trigger: GGGGCCACCCGTTGTGGGCAAAGTCAAGCGGGAACT...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS GCA 90 bp CCTGCAGGCGCTGTCTGCACACGCCTGACCGAGTCCACGTGCAAATaGACACGCACGAGCATTTGCAGGAGACCCCGGAAACACGCACAC +
Preference number: 5 (lower is better)
Translates to: PAGAVCTRLTESTCK*TRTSICRRPRKHAH
Trigger: GTGTGCGTGTTTCCGGGGTCTCCTGCAAATGCTCGTGCGTGTGCATTTGCACGTGGACTCGGTCAGGCGTGTGCAGACAGCGCCTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576145.1
CDS GCA 90 bp CCCAGACCTGCAGGCGCTGTCTGCACACGCCTGACCGAGTCCACGTaGAAATGCACACGCACGAGCATTTGCAGGAGACCCCGGAAACAC +
Preference number: 5 (lower is better)
Translates to: PRPAGAVCTRLTEST*KCTRTSICRRPRKH
Trigger: GTGTTTCCGGGGTCTCCTGCAAATGCTCGTGCGTGTGCATTTGCACGTGGACTCGGTCAGGCGTGTGCAGACAGCGCCTGCAGGTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576145.1
CDS-3UTR CAA 90 bp CCCAGCCAAGCAGCCTCCACGCAGGGGGACTGGACAATCAGCCGCTTCTCTGCCGCGTCCACTGAGGTCTaGTTCTTCCCCAAGTTGACC +
Preference number: 5 (lower is better)
Translates to: PSQAASTQGDWTISRFSAASTEV*FFPKLT
Trigger: GGTCAACTTGGGGAAGAACAAGACCTCAGTGGACGC...GGCAGAGAAGCGGCTGATTGTCCAGTCCCCCTGCGTGGAGGCTGCTTGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCGGGATGTCCCCTCTGTaGCTGTCTCCACGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFGMSPL*LSPRWE
Trigger: TTCCCACCGTGGAGACAGCAACAGAGGGGACATCCC...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp GCAGATAGCAGAGGCCTGGATGGACCTGCAGTATCTTGGCAGGGCCTATGGCAACAGCTGTCACGCCCCTaGGACCCTGCTCTGCACCGA +
Preference number: 5 (lower is better)
Translates to: ADSRGLDGPAVSWQGLWQQLSRP*DPALHR
Trigger: TCGGTGCAGAGCAGGGTCCAAGGGGCGTGACAGCTG...TTGCCATAGGCCCTGCCAAGATACTGCAGGTCCATCCAGGCCTCTGCTATCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCCCTCACAGGGTAGCTTaGAACAGGCAGAGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFPHRVA*NRQSQR
Trigger: CCTCTGGCTCTGCCTGTTCAAAGCTACCCTGTGAGG...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS CCA 90 bp TCCTCCTGCACAGAGCTCGCAGCTGCAAAGGATCCCTCATCCCCCTaGCCTTCATACAGAGCTTTGGCCCCACCTTTCTCCTGGCTTGGG +
Preference number: 5 (lower is better)
Translates to: SSCTELAAAKDPSSP*PSYRALAPPFSWLG
Trigger: CCCAAGCCAGGAGAAAGGTGGGGCCAAAGCTCTGTATGAAGGCCAGGGGGATGAGGGATCCTTTGCAGCTGCGAGCTCTGTGCAGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571392.1
CDS-3UTR CAA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCCCTGTTAATGACAGCTaGGTCCTCAGGGAGGCGGAA +
Preference number: 5 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFPVNDS*VLREAE
Trigger: TTCCGCCTCCCTGAGGACCAAGCTGTCATTAACAGG...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCTTGTTCTTCCCCAAGTaGACCCCCAGAGGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFLFFPK*TPRGSP
Trigger: TGGACTGCCTCTGGGGGTCAACTTGGGGAAGAACAA...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATACTCTCCTGCAGCACCTaGGTCAGCAGGCGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: VPSVAVSTVGNGQLENLILSCST*VSRRRS
Trigger: GCTGCGCCGCCTGCTGACCAAGGTGCTGCAGGAGAG...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAAGGCTTGCCTGAGTCCTaGGGAAGGTTCCAGATCAGG +
Preference number: 5 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKGLPES*GRFQIR
Trigger: CCTGATCTGGAACCTTCCCAAGGACTCAGGCAAGCC...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCACCCTTCCACCATCCTaGGTCCCAGAGGGAGACGCG +
Preference number: 5 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGTLPPS*VPEGDA
Trigger: CGCGTCTCCCTCTGGGACCAAGGATGGTGGAAGGGT...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS TCA 90 bp CTGCCCCAGACCTGCTGGATCCCCACTCCTTACCCAGCCACTCTCTaGGAATTGCACACTCACTTGCCACCTTCTGCCTGGGCTCCCAAA +
Preference number: 5 (lower is better)
Translates to: LPQTCWIPTPYPATL*ELHTHLPPSAWAPK
Trigger: TTTGGGAGCCCAGGCAGAAGGTGGCAAGTGAGTGTGCAATTCTCAGAGAGTGGCTGGGTAAGGAGTGGGGATCCAGCAGGTCTGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571392.1
CDS GCA 90 bp AGCTCAGAGCAAACGCTCCCTCTCCTCCTGCACAGAGCTCGCAGCTaGAAAGGATCCCTCATCCCCCTGGCCTTCATACAGAGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: SSEQTLPLLLHRARS*KGSLIPLAFIQSFG
Trigger: GCCAAAGCTCTGTATGAAGGCCAGGGGGATGAGGGATCCTTTGCAGCTGCGAGCTCTGTGCAGGAGGAGAGGGAGCGTTTGCTCTGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571392.1
CDS GCA 90 bp TCCCCACTCCTTACCCAGCCACTCTCTGAGAATTGCACACTCACTTaGCACCTTCTGCCTGGGCTCCCAAACAGCCTCCTGAAGCCCCTG +
Preference number: 5 (lower is better)
Translates to: SPLLTQPLSENCTLT*HLLPGLPNSLLKPL
Trigger: CAGGGGCTTCAGGAGGCTGTTTGGGAGCCCAGGCAGAAGGTGGCAAGTGAGTGTGCAATTCTCAGAGAGTGGCTGGGTAAGGAGTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571392.1
CDS CCA 90 bp GCGGTCATGTGTTCACTAAGCACCCCTGTGCCAGGCTCAAAAACATaGCCCAGGCGCAGACACTCAGATCAGCACCCACCCAGACCTGCA +
Preference number: 5 (lower is better)
Translates to: AVMCSLSTPVPGSKT*PRRRHSDQHPPRPA
Trigger: TGCAGGTCTGGGTGGGTGCTGATCTGAGTGTCTGCGCCTGGGCCATGTTTTTGAGCCTGGCACAGGGGTGCTTAGTGAACACATGACCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576145.1
CDS-3UTR CAA 90 bp CCAGCTGCACCACAAAGGCCCCTGGCAGCTTTCAGGTCCTGCTCTCAGATGTGGCCTGTTAATGACAGCTaGGTCCTCAGGGAGGCGGAA +
Preference number: 5 (lower is better)
Translates to: PAAPQRPLAAFRSCSQMWPVNDS*VLREAE
Trigger: TTCCGCCTCCCTGAGGACCAAGCTGTCATTAACAGG...CCACATCTGAGAGCAGGACCTGAAAGCTGCCAGGGGCCTTTGTGGTGCAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571288.6
CDS-3UTR CAA 90 bp CGCCCCTTGGACCCTGCTCTGCACCGACACCAGAACGAAGGCACAGGCACATTCTCGATGCCCAACTCTTaGACCACACTGGCAATGTCC +
Preference number: 5 (lower is better)
Translates to: RPLDPALHRHQNEGTGTFSMPNS*TTLAMS
Trigger: GGACATTGCCAGTGTGGTCAAAGAGTTGGGCATCGA...GAATGTGCCTGTGCCTTCGTTCTGGTGTCGGTGCAGAGCAGGGTCCAAGGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCGCCTCCAGTTCCCGCTaGACTTTGCCCACAACGGGT +
Preference number: 5 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLASSSR*TLPTTG
Trigger: ACCCGTTGTGGGCAAAGTCAAGCGGGAACTGGAGGC...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTGCTGAGGCAGAAGAATaGCTTGAACCCGGGAGACAG +
Preference number: 5 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFAEAEE*LEPGRQ
Trigger: CTGTCTCCCGGGTTCAAGCAATTCTTCTGCCTCAGC...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGTAATCTCAGCTCTTaGGGAGGCCAAGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKCNLSS*GGQGGW
Trigger: CCACCCACCTTGGCCTCCCAAAGAGCTGAGATTACA...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS TCA 90 bp TCAGACGCTGTCCTCACCTCCGATGATCTGCTCCAATGGCATCTGTaGCTCCGCCAAAGCCCTGCTCTTTCAGAAGGGCCTCCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: SDAVLTSDDLLQWHL*LRQSPALSEGPPVP
Trigger: GGGAACTGGAGGCCCTTCTGAAAGAGCAGGGCTTTGGCGGAGTCACAGATGCCATTGGAGCAGATCATCGGAGGTGAGGACAGCGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219240.9
ENST00000571392.1
ENST00000572887.5
CDS TCA 90 bp GCACACTCACTTGCCACCTTCTGCCTGGGCTCCCAAACAGCCTCCTaGAGCCCCTGCAGCCACTCCATCTCTCTAGGCTTTCTGTCTGAA +
Preference number: 5 (lower is better)
Translates to: AHSLATFCLGSQTAS*SPCSHSISLGFLSE
Trigger: TTCAGACAGAAAGCCTAGAGAGATGGAGTGGCTGCAGGGGCTTCAGGAGGCTGTTTGGGAGCCCAGGCAGAAGGTGGCAAGTGAGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571392.1
CDS GCA 90 bp AAATCACCTCTCTTCCTAGCTCAGAGCAAACGCTCCCTCTCCTCCTaGACAGAGCTCGCAGCTGCAAAGGATCCCTCATCCCCCTGGCCT +
Preference number: 5 (lower is better)
Translates to: KSPLFLAQSKRSLSS*TELAAAKDPSSPWP
Trigger: AGGCCAGGGGGATGAGGGATCCTTTGCAGCTGCGAGCTCTGTGCAGGAGGAGAGGGAGCGTTTGCTCTGAGCTAGGAAGAGAGGTGATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571392.1
CDS GCA 90 bp AGACCTGCTGGATCCCCACTCCTTACCCAGCCACTCTCTGAGAATTaGACACTCACTTGCCACCTTCTGCCTGGGCTCCCAAACAGCCTC +
Preference number: 5 (lower is better)
Translates to: RPAGSPLLTQPLSEN*TLTCHLLPGLPNSL
Trigger: GAGGCTGTTTGGGAGCCCAGGCAGAAGGTGGCAAGTGAGTGTGCAATTCTCAGAGAGTGGCTGGGTAAGGAGTGGGGATCCAGCAGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571392.1
CDS CCA 90 bp TCGATGCCCAACTCTTTGACCACACTGGCAATGTCCTCCTTATCCTaGCTGGTGAGGTCAGGAGCGATCTTCACCAGGACTGCCGGCCTG +
Preference number: 5 (lower is better)
Translates to: SMPNSLTTLAMSSLS*LVRSGAIFTRTAGL
Trigger: CAGGCCGGCAGTCCTGGTGAAGATCGCTCCTGACCTCACCAGCCAGGATAAGGAGGACATTGCCAGTGTGGTCAAAGAGTTGGGCATCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAACAGCATGTCAGAGTCTaGAAATCTGGCCCGTGGAAG +
Preference number: 5 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKQHVRV*KSGPWK
Trigger: CTTCCACGGGCCAGATTTCAAGACTCTGACATGCTG...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACCAGCTGTCACGCCCCTaGGACCCTGCTCTGCACCGA +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHQLSRP*DPALHR
Trigger: TCGGTGCAGAGCAGGGTCCAAGGGGCGTGACAGCTG...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS TCA 90 bp TCAGACGCTGTCCTCACCTCCGATGATCTGCTCCAATGGCATCTGTaGCTCCGCCAAAGCCCTGCTCTCTTCTGTGAGCTTGGCCTGCTT +
Preference number: 5 (lower is better)
Translates to: SDAVLTSDDLLQWHL*LRQSPALFCELGLL
Trigger: AAGCAGGCCAAGCTCACAGAAGAGAGCAGGGCTTTGGCGGAGTCACAGATGCCATTGGAGCAGATCATCGGAGGTGAGGACAGCGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574309.5
CDS-3UTR CAA 90 bp GCAGATAGCAGAGGCCTGGATGGACCTGCAGTATCTTGGCAGGGCCTATGGCAATTGTTCTTCCCCAAGTaGACCCCCAGAGGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: ADSRGLDGPAVSWQGLWQLFFPK*TPRGSP
Trigger: TGGACTGCCTCTGGGGGTCAACTTGGGGAAGAACAA...TTGCCATAGGCCCTGCCAAGATACTGCAGGTCCATCCAGGCCTCTGCTATCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACAGTTCCCGCTTGACTTaGCCCACAACGGGTGGCCCC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHSSRLT*PTTGGP
Trigger: GGGGCCACCCGTTGTGGGCAAAGTCAAGCGGGAACT...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp GCAGATAGCAGAGGCCTGGATGGACCTGCAGTATCTTGGCAGGGCCTATGGCAATGTAATCTCAGCTCTTaGGGAGGCCAAGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: ADSRGLDGPAVSWQGLWQCNLSS*GGQGGW
Trigger: CCACCCACCTTGGCCTCCCAAAGAGCTGAGATTACA...TTGCCATAGGCCCTGCCAAGATACTGCAGGTCCATCCAGGCCTCTGCTATCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp TTTGGGAGACTGAGGCGGCCAGATCATGAGGTCAGGAGATCGAACCATCCTGGCCCAGGATTCCCAGCATaGAGAGCTGCTCTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: FGRLRRPDHEVRRSNHPGPGFPA*RAALVS
Trigger: AGACACCAGAGCAGCTCTCAATGCTGGGAATCCTGG...GCCAGGATGGTTCGATCTCCTGACCTCATGATCTGGCCGCCTCAGTCTCCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACACCCTTCCACCATCCTaGGTCCCAGAGGGAGACGCG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHTLPPS*VPEGDA
Trigger: CGCGTCTCCCTCTGGGACCAAGGATGGTGGAAGGGT...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp GCAGATAGCAGAGGCCTGGATGGACCTGCAGTATCTTGGCAGGGCCTATGGCAACCCGAATGGTTTGAGTaGATAAATCCCGGAGGGGCT +
Preference number: 5 (lower is better)
Translates to: ADSRGLDGPAVSWQGLWQPEWFE*INPGGA
Trigger: AGCCCCTCCGGGATTTATCAACTCAAACCATTCGGG...TTGCCATAGGCCCTGCCAAGATACTGCAGGTCCATCCAGGCCTCTGCTATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATAGGCTTGCCTGAGTCCTaGGGAAGGTTCCAGATCAGG +
Preference number: 5 (lower is better)
Translates to: VPSVAVSTVGNGQLENLIGLPES*GRFQIR
Trigger: CCTGATCTGGAACCTTCCCAAGGACTCAGGCAAGCC...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS TCA 90 bp ATGGGAACTCGGCCTTGGGTGAGTGCATACATCTCCCGAATGGTTTaGGTTGATAAATCCCGGAGGGGCTTCCCACTCAGCCCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: MGTRPWVSAYISRMV*VDKSRRGFPLSPPV
Trigger: AACAGGAGGGCTGAGTGGGAAGCCCCTCCGGGATTTATCAACTCAAACCATTCGGGAGATGTATGCACTCACCCAAGGCCGAGTTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219240.9
CDS CCA 90 bp CCGAGGTCGCTCTCTGACAAGCAAAAAGAAAACGCCCAGAGAAGTTaGACCAGAGTCTCAACACTGCCCTGGTGCTCAACCAACCCTGGA +
Preference number: 5 (lower is better)
Translates to: PRSLSDKQKENAQRS*TRVSTLPWCSTNPG
Trigger: TCCAGGGTTGGTTGAGCACCAGGGCAGTGTTGAGACTCTGGTCCAACTTCTCTGGGCGTTTTCTTTTTGCTTGTCAGAGAGCGACCTCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571392.1
CDS-3UTR CAA 90 bp AAGGCAGTCTTCCGTGGAGAACCTTCCAAGGGCCGACTCTTCCCTCTTCTCCTCACGGCTTCCCCATGCTaGTCAAATCCTGCAGCAATT +
Preference number: 5 (lower is better)
Translates to: KAVFRGEPSKGRLFPLLLTASPC*SNPAAI
Trigger: AATTGCTGCAGGATTTGACAAGCATGGGGAAGCCGT...GAGGAGAAGAGGGAAGAGTCGGCCCTTGGAAGGTTCTCCACGGAAGACTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATACCTGTTAATGACAGCTaGGTCCTCAGGGAGGCGGAA +
Preference number: 5 (lower is better)
Translates to: VPSVAVSTVGNGQLENLIPVNDS*VLREAE
Trigger: TTCCGCCTCCCTGAGGACCAAGCTGTCATTAACAGG...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATATGGACCTGCAGTATCTaGGCAGGGCCTATGGCAAAC +
Preference number: 5 (lower is better)
Translates to: VPSVAVSTVGNGQLENLIWTCSI*AGPMAN
Trigger: GTTTGCCATAGGCCCTGCCAAGATACTGCAGGTCCA...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS CCA 90 bp AAAGAAAACGCCCAGAGAAGTTGGACCAGAGTCTCAACACTGCCCTaGTGCTCAACCAACCCTGGACCTGCCCATTGCACCTGTTATGAG +
Preference number: 5 (lower is better)
Translates to: KENAQRSWTRVSTLP*CSTNPGPAHCTCYE
Trigger: CTCATAACAGGTGCAATGGGCAGGTCCAGGGTTGGTTGAGCACCAGGGCAGTGTTGAGACTCTGGTCCAACTTCTCTGGGCGTTTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571392.1
CDS-3UTR CAA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATACAGCATGTCAGAGTCTaGAAATCTGGCCCGTGGAAG +
Preference number: 5 (lower is better)
Translates to: VPSVAVSTVGNGQLENLIQHVRV*KSGPWK
Trigger: CTTCCACGGGCCAGATTTCAAGACTCTGACATGCTG...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACAAATTAGCTGGGTGTGGTAGTGGGCACGCGTCCACTGAGGTCTaGTTCTTCCCCAAGTTGACC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHKLAGCGSGHASTEV*FFPKLT
Trigger: GGTCAACTTGGGGAAGAACAAGACCTCAGTGGACGC...GTGCCCACTACCACACCCAGCTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp GTCCCCTCTGTTGCTGTCTCCACGGTGGGAAATGGGCAGCTTGAAAACCTGATATATGGGAACTCGGCCTaGGGTGAGTGCATACATCTC +
Preference number: 5 (lower is better)
Translates to: VPSVAVSTVGNGQLENLIYGNSA*GECIHL
Trigger: GAGATGTATGCACTCACCCAAGGCCGAGTTCCCATA...TATCAGGTTTTCAAGCTGCCCATTTCCCACCGTGGAGACAGCAACAGAGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219240.9
CDS-3UTR CAA 90 bp ACATCTTTATGCAGGGGAAAAGTCTGGGAGGACAGACAGAAAGGCATGTCTGCAGCCTCCAGTTCCCGCTaGACTTTGCCCACAACGGGT +
Preference number: 5 (lower is better)
Translates to: TSLCRGKVWEDRQKGMSAASSSR*TLPTTG
Trigger: ACCCGTTGTGGGCAAAGTCAAGCGGGAACTGGAGGC...TGCAGACATGCCTTTCTGTCTGTCCTCCCAGACTTTTCCCCTGCATAAAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp CCCAGGCTGAGGAAAGTGACCCCGCAGGGGTCTGGCCAGCATGTGGTTCCTTTTGCTGTACCGTTTGAATaGCTAGTAAAGAATGCAGGT +
Preference number: 5 (lower is better)
Translates to: PRLRKVTPQGSGQHVVPFAVPFE*LVKNAG
Trigger: ACCTGCATTCTTTACTAGCAATTCAAACGGTACAGC...AAAAGGAACCACATGCTGGCCAGACCCCTGCGGGGTCACTTTCCTCAGCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp CAGAGCCAGAGGAGCTGGGGATGTCCCCTCTGTTGCTGTCTCCACGGTGGGAAAGCTGTACCGTTTGAATaGCTAGTAAAGAATGCAGGT +
Preference number: 5 (lower is better)
Translates to: QSQRSWGCPLCCCLHGGKAVPFE*LVKNAG
Trigger: ACCTGCATTCTTTACTAGCAATTCAAACGGTACAGC...TTTCCCACCGTGGAGACAGCAACAGAGGGGACATCCCCAGCTCCTCTGGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp ACATCTTTATGCAGGGGAAAAGTCTGGGAGGACAGACAGAAAGGCATGTCTGCAGGGATGTCCCCTCTGTaGCTGTCTCCACGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: TSLCRGKVWEDRQKGMSAGMSPL*LSPRWE
Trigger: TTCCCACCGTGGAGACAGCAACAGAGGGGACATCCC...TGCAGACATGCCTTTCTGTCTGTCCTCCCAGACTTTTCCCCTGCATAAAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS TCA 90 bp TCTCATACTTCTCTCATCCCTCTGTCACTGTCACTAGACACTCCCTaGAGGCAGGAGCCTCATCTCTCTTTCATCCCTGTATCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: SHTSLIPLSLSLDTP*RQEPHLSFIPVSPA
Trigger: GGCTGGGGATACAGGGATGAAAGAGAGATGAGGCTCCTGCCTTCAGGGAGTGTCTAGTGACAGTGACAGAGGGATGAGAGAAGTATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571392.1
CDS TCA 90 bp TATGGGAACTTGCCTTGGGTGAGTGCATACATCTCCCGAATGGTTTaGGTTGATAAATCCCGGAGGGGCTTCCCACTCAGCCCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: YGNLPWVSAYISRMV*VDKSRRGFPLSPPV
Trigger: AACAGGAGGGCTGAGTGGGAAGCCCCTCCGGGATTTATCAACTCAAACCATTCGGGAGATGTATGCACTCACCCAAGGCAAGTTCCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571392.1
CDS TCA 90 bp CCAATTATGGGAACTTGGGTGAGTGCATACATCTCCCGAATGGTTTaGGTTGATAAATCCCGGAGGGGCTTCCCACTCAGCCCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: PIMGTWVSAYISRMV*VDKSRRGFPLSPPV
Trigger: AACAGGAGGGCTGAGTGGGAAGCCCCTCCGGGATTTATCAACTCAAACCATTCGGGAGATGTATGCACTCACCCAAGTTCCCATAATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572887.5
CDS TCA 90 bp GGGCGTCCGTGTAAGAACATAATACTTGCAGCCGAGGTCGCTCTCTaGCAAGCAAAAAGAAAACGCCCAGAGAAGTTGGACCAGAGTCTC +
Preference number: 5 (lower is better)
Translates to: GRPCKNIILAAEVAL*QAKRKRPEKLDQSL
Trigger: GAGACTCTGGTCCAACTTCTCTGGGCGTTTTCTTTTTGCTTGTCAGAGAGCGACCTCGGCTGCAAGTATTATGTTCTTACACGGACGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571392.1
CDS TCA 90 bp GTTAAATCCATACCTGCAGAGCACAAGCACACGGGAGGGGCAGAGTaGGACGGCACCATAGCCACTTCCCATACACTTAGGACTTTTTCA +
Preference number: 5 (lower is better)
Translates to: VKSIPAEHKHTGGAE*DGTIATSHTLRTFS
Trigger: TGAAAAAGTCCTAAGTGTATGGGAAGTGGCTATGGTGCCGTCTCACTCTGCCCCTCCCGTGTGCTTGTGCTCTGCAGGTATGGATTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571392.1
CDS CCA 90 bp TCTAAAAGGGTTGGGAGCATGTCCTACTCTAGTTTCATTCCCCGTTaGATCCGGCACACAACGCTAGGCGGTCATGTGTTCACTAAGCAC +
Preference number: 5 (lower is better)
Translates to: SKRVGSMSYSSFIPR*IRHTTLGGHVFTKH
Trigger: GTGCTTAGTGAACACATGACCGCCTAGCGTTGTGTGCCGGATCCAACGGGGAATGAAACTAGAGTAGGACATGCTCCCAACCCTTTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576145.1
CDS-3UTR CAA 90 bp ACATCTTTATGCAGGGGAAAAGTCTGGGAGGACAGACAGAAAGGCATGTCTGCACCAGGATTCCCAGCATaGAGAGCTGCTCTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: TSLCRGKVWEDRQKGMSAPGFPA*RAALVS
Trigger: AGACACCAGAGCAGCTCTCAATGCTGGGAATCCTGG...TGCAGACATGCCTTTCTGTCTGTCCTCCCAGACTTTTCCCCTGCATAAAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS CCA 90 bp GTCCACGGCTTCCCCATGCTTGTCAAATCCTGCAGCAATTCCTACTaGATTTCGGAATTTATGGCCCAGAACTCTCACTTCCAGCATGTC +
Preference number: 5 (lower is better)
Translates to: VHGFPMLVKSCSNSY*ISEFMAQNSHFQHV
Trigger: GACATGCTGGAAGTGAGAGTTCTGGGCCATAAATTCCGAAATCCAGTAGGAATTGCTGCAGGATTTGACAAGCATGGGGAAGCCGTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219240.9
ENST00000572887.5
ENST00000573922.5
ENST00000574309.5
ENST00000576145.1
CDS CCA 90 bp GTCCACGGCTTCCCCATGCTTGTCAAATCCTGCAGCAATTCCTACTaGATTTCGGAATTTATGGCCCAGAACTCTCACTTCCTGGGAAGA +
Preference number: 5 (lower is better)
Translates to: VHGFPMLVKSCSNSY*ISEFMAQNSHFLGR
Trigger: TCTTCCCAGGAAGTGAGAGTTCTGGGCCATAAATTCCGAAATCCAGTAGGAATTGCTGCAGGATTTGACAAGCATGGGGAAGCCGTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572003.5
ENST00000573843.1
CDS CCA 90 bp ATTCCTACTGGATTTCGGAATTTATGGCCCAGAACTCTCACTTCCTaGGAAGAGGAAGACAAAGTCAGAGGCACGCTAAGGCTATCCCGG +
Preference number: 5 (lower is better)
Translates to: IPTGFRNLWPRTLTS*EEEDKVRGTLRLSR
Trigger: CCGGGATAGCCTTAGCGTGCCTCTGACTTTGTCTTCCTCTTCCCAGGAAGTGAGAGTTCTGGGCCATAAATTCCGAAATCCAGTAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572003.5
CDS-3UTR CAA 90 bp ACGGCTTCCCCATGCTTGTCAAATCCTGCAGCAATTCCTACTGGATTTCGGAATCAGCATGTCAGAGTCTaGAAATCTGGCCCGTGGAAG +
Preference number: 5 (lower is better)
Translates to: TASPCLSNPAAIPTGFRNQHVRV*KSGPWK
Trigger: CTTCCACGGGCCAGATTTCAAGACTCTGACATGCTG...ATTCCGAAATCCAGTAGGAATTGCTGCAGGATTTGACAAGCATGGGGAAGCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571288.6
CDS-3UTR CAA 90 bp TATCTCAACAAAACCAAAGCCCATCTTATAAAGTCCGTCCACGGCTTCCCCATGACGGCTTCCCCATGCTaGTCAAATCCTGCAGCAATT +
Preference number: 5 (lower is better)
Translates to: YLNKTKAHLIKSVHGFPMTASPC*SNPAAI
Trigger: AATTGCTGCAGGATTTGACAAGCATGGGGAAGCCGT...CATGGGGAAGCCGTGGACGGACTTTATAAGATGGGCTTTGGTTTTGTTGAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571288.6
CDS-3UTR CAA 90 bp ACATCTTTATGCAGGGGAAAAGTCTGGGAGGACAGACAGAAAGGCATGTCTGCACCCAATTATGGGAACTaGGGTGAGTGCATACATCTC +
Preference number: 5 (lower is better)
Translates to: TSLCRGKVWEDRQKGMSAPNYGN*GECIHL
Trigger: GAGATGTATGCACTCACCCAAGTTCCCATAATTGGG...TGCAGACATGCCTTTCTGTCTGTCCTCCCAGACTTTTCCCCTGCATAAAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572887.5
CDS-3UTR CAA 90 bp GAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTACCGTTTGAATTGCTAGTACCATCTTCTGTGAGCTaGGCCTGCTTCTGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: EEQECLHFKSAVPFELLVPSSVS*ACFCCL
Trigger: CAGACAGCAGAAGCAGGCCAAGCTCACAGAAGATGG...TACTAGCAATTCAAACGGTACAGCACTCTTGAAGTGTAAACATTCCTGTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp GAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTACCGTTTGAATTGCTAGTAGCTGAGGCAGAAGAATaGCTTGAACCCGGGAGACAG +
Preference number: 5 (lower is better)
Translates to: EEQECLHFKSAVPFELLVAEAEE*LEPGRQ
Trigger: CTGTCTCCCGGGTTCAAGCAATTCTTCTGCCTCAGC...TACTAGCAATTCAAACGGTACAGCACTCTTGAAGTGTAAACATTCCTGTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS-3UTR CAA 90 bp GAGGAACAGGAATGTTTACACTTCAAGAGTGCTGTACCGTTTGAATTGCTAGTACCCGAATGGTTTGAGTaGATAAATCCCGGAGGGGCT +
Preference number: 5 (lower is better)
Translates to: EEQECLHFKSAVPFELLVPEWFE*INPGGA
Trigger: AGCCCCTCCGGGATTTATCAACTCAAACCATTCGGG...TACTAGCAATTCAAACGGTACAGCACTCTTGAAGTGTAAACATTCCTGTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS GCA 90 bp TTTGGCCCCACCTTTCTCCTGGCTTGGGATAGATACATACATATATaGTTAAGGTCCCTAGGTTACAATCTTCTTGAGGGTGAGCAACAT +
Preference number: 5 (lower is better)
Translates to: FGPTFLLAWDRYIHI*LRSLGYNLLEGEQH
Trigger: ATGTTGCTCACCCTCAAGAAGATTGTAACCTAGGGACCTTAAGCATATATGTATGTATCTATCCCAAGCCAGGAGAAAGGTGGGGCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571392.1
CDS TCA 72 bp TCCCGGAGCCGCCTTCGGTCCATGCCTCGCCCGGCCTaGCTCTCCGTTCTCGCCCTCCCCGGTCCCTGGTCC +
Preference number: 6 (lower is better)
Translates to: SRSRLRSMPRPA*LSVLALPGPWS
Trigger: GGACCAGGGACCGGGGAGGGCGAGAACGGAGAGTCAGGCCGGGCGAGGCATGGACCGAAGGCGGCTCCGGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576145.1
CDS CAA 90 bp TCTCCGCCCCTTAGCCGCCAACCCACCAGTCGCCGGGCAGAAGGGTaGAGAGGACGCCTCCGCGCAGCGGGGAAGGCCCGGCACCACCCC +
Preference number: 6 (lower is better)
Translates to: SPPLSRQPTSRRAEG*RGRLRAAGKARHHP
Trigger: GGGGTGGTGCCGGGCCTTCCCCGCTGCGCGGAGGCGTCCTCTCAACCCTTCTGCCCGGCGACTGGTGGGTTGGCGGCTAAGGGGCGGAGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572887.5
CDS TCA 72 bp TTAGCCGCCAACCCACCAGTCGCCGGGCAGAAGGGTTaGGAGGACGCCTCCGCGCAGCGGGGAAGGCCCGGC +
Preference number: 6 (lower is better)
Translates to: LAANPPVAGQKG*EDASAQRGRPG
Trigger: GCCGGGCCTTCCCCGCTGCGCGGAGGCGTCCTCTCAACCCTTCTGCCCGGCGACTGGTGGGTTGGCGGCTAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572887.5
CDS CAA 72 bp CTTAGCCGCCAACCCACCAGTCGCCGGGCAGAAGGGTaGAGAGGACGCCTCCGCGCAGCGGGGAAGGCCCGG +
Preference number: 6 (lower is better)
Translates to: LSRQPTSRRAEG*RGRLRAAGKAR
Trigger: CCGGGCCTTCCCCGCTGCGCGGAGGCGTCCTCTCAACCCTTCTGCCCGGCGACTGGTGGGTTGGCGGCTAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572887.5
CDS TCA 72 bp ACCTTGGTCAGCAGGCGGCGCAGCTCGGCCTTTCCCTaGAGGCTCCGCAGCCCGGCAGTGTTGGGGCTGGAC +
Preference number: 6 (lower is better)
Translates to: TLVSRRRSSAFP*RLRSPAVLGLD
Trigger: GTCCAGCCCCAACACTGCCGGGCTGCGGAGCCTTCAGGGAAAGGCCGAGCTGCGCCGCCTGCTGACCAAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS GCA 72 bp ACGGGTGGCCCCCAGAAGGTGAGGGCCGTGTACAGCTaGACCAGGGAGGCCCCTGCCCGGATCTTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: TGGPQKVRAVYS*TREAPARIFSS
Trigger: GCTGGAGAAGATCCGGGCAGGGGCCTCCCTGGTGCAGCTGTACACGGCCCTCACCTTCTGGGGGCCACCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219240.9
ENST00000571392.1
ENST00000572887.5
CDS CCA 72 bp TTCCCTGAAGGCTCCGCAGCCCGGCAGTGTTGGGGCTaGACACATTCACCACCAGGTAGTCGGCCAGGGGGC +
Preference number: 6 (lower is better)
Translates to: FPEGSAARQCWG*THSPPGSRPGG
Trigger: GCCCCCTGGCCGACTACCTGGTGGTGAATGTGTCCAGCCCCAACACTGCCGGGCTGCGGAGCCTTCAGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS CCA 72 bp CCACTCAGCCCTCCTGTTTCAGAGCGCAGGGCACCCTaGAGGCCCGCAGGGCGACTCACGGTGGTGTTCGTA +
Preference number: 6 (lower is better)
Translates to: PLSPPVSERRAP*RPAGRLTVVFV
Trigger: TACGAACACCACCGTGAGTCGCCCTGCGGGCCTCCAGGGTGCCCTGCGCTCTGAAACAGGAGGGCTGAGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219240.9
ENST00000571392.1
ENST00000572887.5
ENST00000573922.5
CDS GCA 72 bp CCCCTGCCCGGATCTTCTCCAGCGCGTCCTGCCCGCTaGTCACACCACCAACCCCAATTATGGGAACTCGGC +
Preference number: 6 (lower is better)
Translates to: PLPGSSPARPAR*SHHQPQLWELG
Trigger: GCCGAGTTCCCATAATTGGGGTTGGTGGTGTGAGCAGCGGGCAGGACGCGCTGGAGAAGATCCGGGCAGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219240.9
CDS GCA 72 bp AGGGAGGCCCCTGCCCGGATCTTCTCCAGCGCGTCCTaGCCGCTGCTCACACCACCAACCCCAATTATGGGA +
Preference number: 6 (lower is better)
Translates to: REAPARIFSSAS*PLLTPPTPIMG
Trigger: TCCCATAATTGGGGTTGGTGGTGTGAGCAGCGGGCAGGACGCGCTGGAGAAGATCCGGGCAGGGGCCTCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219240.9
ENST00000571392.1
ENST00000572887.5
CDS GCA 72 bp CAGGCGCAGACACTCAGATCAGCACCCACCCAGACCTaGAGGCGCTGTCTGCACACGCCTGACCGAGTCCAC +
Preference number: 6 (lower is better)
Translates to: QAQTLRSAPTQT*RRCLHTPDRVH
Trigger: GTGGACTCGGTCAGGCGTGTGCAGACAGCGCCTGCAGGTCTGGGTGGGTGCTGATCTGAGTGTCTGCGCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576145.1
CDS CCA 72 bp CGGCCTTTCCCTGAAGGCTCCGCAGCCCGGCAGTGTTaGGGCTGGACACATTCACCACCAGGTAGTCGGCCA +
Preference number: 6 (lower is better)
Translates to: RPFPEGSAARQC*GWTHSPPGSRP
Trigger: TGGCCGACTACCTGGTGGTGAATGTGTCCAGCCCCAACACTGCCGGGCTGCGGAGCCTTCAGGGAAAGGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS GCA 72 bp CTGGCTGGTGAGGTCAGGAGCGATCTTCACCAGGACTaGCGGCCTGTGCACTCTCCGCAAGCCATCCCTCTC +
Preference number: 6 (lower is better)
Translates to: LAGEVRSDLHQD*RPVHSPQAIPL
Trigger: GAGAGGGATGGCTTGCGGAGAGTGCACAGGCCGGCAGTCCTGGTGAAGATCGCTCCTGACCTCACCAGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219240.9
ENST00000572887.5
CDS GCA 72 bp CCCCTGCCCGGATCTTCTCCAGCGCGTCCTGCCCGCTaGTCACACCACCAACCCCAATTATGGGAACTTGGG +
Preference number: 6 (lower is better)
Translates to: PLPGSSPARPAR*SHHQPQLWELG
Trigger: CCCAAGTTCCCATAATTGGGGTTGGTGGTGTGAGCAGCGGGCAGGACGCGCTGGAGAAGATCCGGGCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572887.5
CDS GCA 72 bp CCCCTGCCCGGATCTTCTCCAGCGCGTCCTGCCCGCTaGTCACACCACCAACCCCAATTATGGGAACTTGCC +
Preference number: 6 (lower is better)
Translates to: PLPGSSPARPAR*SHHQPQLWELA
Trigger: GGCAAGTTCCCATAATTGGGGTTGGTGGTGTGAGCAGCGGGCAGGACGCGCTGGAGAAGATCCGGGCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571392.1
CDS CCA 72 bp CTTCCGTCATTAAGCCCGCCCCTGTCTCCCTTCCATTaGAGGAGATGGTGGCGGCCCCTCTTGTCTCCGCCC +
Preference number: 6 (lower is better)
Translates to: LPSLSPPLSPFH*RRWWRPLLSPP
Trigger: GGGCGGAGACAAGAGGGGCCGCCACCATCTCCTCCAATGGAAGGGAGACAGGGGCGGGCTTAATGACGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572887.5
CDS CAA 72 bp CCTTCCGTCATTAAGCCCGCCCCTGTCTCCCTTCCATaGGAGGAGATGGTGGCGGCCCCTCTTGTCTCCGCC +
Preference number: 6 (lower is better)
Translates to: PSVIKPAPVSLP*EEMVAAPLVSA
Trigger: GGCGGAGACAAGAGGGGCCGCCACCATCTCCTCCAATGGAAGGGAGACAGGGGCGGGCTTAATGACGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572887.5
CDS CAA 90 bp ACTCCGCCAAAGCCCTGCTCTTTCAGAAGGGCCTCCAGTTCCCGCTaGACTTTGCCCACAACGGGTGGCCCCCAGAAGGTGAGGGCCGTG +
Preference number: 6 (lower is better)
Translates to: TPPKPCSFRRASSSR*TLPTTGGPQKVRAV
Trigger: CACGGCCCTCACCTTCTGGGGGCCACCCGTTGTGGGCAAAGTCAAGCGGGAACTGGAGGCCCTTCTGAAAGAGCAGGGCTTTGGCGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219240.9
ENST00000571392.1
ENST00000572887.5
CDS CAA 90 bp CCAAAGCCCTGCTCTTTCAGAAGGGCCTCCAGTTCCCGCTTGACTTaGCCCACAACGGGTGGCCCCCAGAAGGTGAGGGCCGTGTACAGC +
Preference number: 6 (lower is better)
Translates to: PKPCSFRRASSSRLT*PTTGGPQKVRAVYS
Trigger: GCTGTACACGGCCCTCACCTTCTGGGGGCCACCCGTTGTGGGCAAAGTCAAGCGGGAACTGGAGGCCCTTCTGAAAGAGCAGGGCTTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219240.9
ENST00000571392.1
ENST00000572887.5
CDS GCA 72 bp GCAGGCGCTGTCTGCACACGCCTGACCGAGTCCACGTaGAAATGCACACGCACGAGCATTTGCAGGAGACCC +
Preference number: 6 (lower is better)
Translates to: AGAVCTRLTEST*KCTRTSICRRP
Trigger: GGGTCTCCTGCAAATGCTCGTGCGTGTGCATTTGCACGTGGACTCGGTCAGGCGTGTGCAGACAGCGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576145.1
CDS CAA 72 bp TGCTCTTTCAGAAGGGCCTCCAGTTCCCGCTTGACTTaGCCCACAACGGGTGGCCCCCAGAAGGTGAGGGCC +
Preference number: 6 (lower is better)
Translates to: CSFRRASSSRLT*PTTGGPQKVRA
Trigger: GGCCCTCACCTTCTGGGGGCCACCCGTTGTGGGCAAAGTCAAGCGGGAACTGGAGGCCCTTCTGAAAGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219240.9
ENST00000571392.1
ENST00000572887.5
CDS GCA 72 bp ACCGAGTCCACGTGCAAATGCACACGCACGAGCATTTaGAGGAGACCCCGGAAACACGCACACGTCCCAGGG +
Preference number: 6 (lower is better)
Translates to: TESTCKCTRTSI*RRPRKHAHVPG
Trigger: CCCTGGGACGTGTGCGTGTTTCCGGGGTCTCCTGCAAATGCTCGTGCGTGTGCATTTGCACGTGGACTCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576145.1
CDS CAA 72 bp AAGCCCTGCTCTTTCAGAAGGGCCTCCAGTTCCCGCTaGACTTTGCCCACAACGGGTGGCCCCCAGAAGGTG +
Preference number: 6 (lower is better)
Translates to: KPCSFRRASSSR*TLPTTGGPQKV
Trigger: CACCTTCTGGGGGCCACCCGTTGTGGGCAAAGTCAAGCGGGAACTGGAGGCCCTTCTGAAAGAGCAGGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219240.9
ENST00000571392.1
ENST00000572887.5
CDS CAA 72 bp GACCGAGTCCACGTGCAAATGCACACGCACGAGCATTaGCAGGAGACCCCGGAAACACGCACACGTCCCAGG +
Preference number: 6 (lower is better)
Translates to: DRVHVQMHTHEH*QETPETRTRPR
Trigger: CCTGGGACGTGTGCGTGTTTCCGGGGTCTCCTGCAAATGCTCGTGCGTGTGCATTTGCACGTGGACTCGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576145.1
CDS GCA 72 bp GCTGTCTGCACACGCCTGACCGAGTCCACGTGCAAATaGACACGCACGAGCATTTGCAGGAGACCCCGGAAA +
Preference number: 6 (lower is better)
Translates to: AVCTRLTESTCK*TRTSICRRPRK
Trigger: TTTCCGGGGTCTCCTGCAAATGCTCGTGCGTGTGCATTTGCACGTGGACTCGGTCAGGCGTGTGCAGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576145.1
CDS TCA 72 bp GCACTCCAGCCTAAGGAGCAGAGCAAGACTCTTCTGTaGGCTTGGCCTGCTTCTGCTGTCTGGCCCGTAACC +
Preference number: 6 (lower is better)
Translates to: ALQPKEQSKTLL*AWPASAVWPVT
Trigger: GGTTACGGGCCAGACAGCAGAAGCAGGCCAAGCTCACAGAAGAGTCTTGCTCTGCTCCTTAGGCTGGAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572003.5
CDS GCA 72 bp GGATCCCCACTCCTTACCCAGCCACTCTCTGAGAATTaGACACTCACTTGCCACCTTCTGCCTGGGCTCCCA +
Preference number: 6 (lower is better)
Translates to: GSPLLTQPLSEN*TLTCHLLPGLP
Trigger: TGGGAGCCCAGGCAGAAGGTGGCAAGTGAGTGTGCAATTCTCAGAGAGTGGCTGGGTAAGGAGTGGGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571392.1
CDS CCA 72 bp TGTTCACTAAGCACCCCTGTGCCAGGCTCAAAAACATaGCCCAGGCGCAGACACTCAGATCAGCACCCACCC +
Preference number: 6 (lower is better)
Translates to: CSLSTPVPGSKT*PRRRHSDQHPP
Trigger: GGGTGGGTGCTGATCTGAGTGTCTGCGCCTGGGCCATGTTTTTGAGCCTGGCACAGGGGTGCTTAGTGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576145.1
CDS CCA 72 bp ACAGAGCTCGCAGCTGCAAAGGATCCCTCATCCCCCTaGCCTTCATACAGAGCTTTGGCCCCACCTTTCTCC +
Preference number: 6 (lower is better)
Translates to: TELAAAKDPSSP*PSYRALAPPFS
Trigger: GGAGAAAGGTGGGGCCAAAGCTCTGTATGAAGGCCAGGGGGATGAGGGATCCTTTGCAGCTGCGAGCTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571392.1
CDS CAA 72 bp TCCGCGGCGTCCACTGAGGTCTTGTTCTTCCCCAAGTaGACCCCCAGAGGCAGTCCATCTGTAGTCCTAGCT +
Preference number: 6 (lower is better)
Translates to: SAASTEVLFFPK*TPRGSPSVVLA
Trigger: AGCTAGGACTACAGATGGACTGCCTCTGGGGGTCAACTTGGGGAAGAACAAGACCTCAGTGGACGCCGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572003.5
CDS TCA 72 bp GTCCTCACCTCCGATGATCTGCTCCAATGGCATCTGTaGCTCCGCCAAAGCCCTGCTCTTTCAGAAGGGCCT +
Preference number: 6 (lower is better)
Translates to: VLTSDDLLQWHL*LRQSPALSEGP
Trigger: AGGCCCTTCTGAAAGAGCAGGGCTTTGGCGGAGTCACAGATGCCATTGGAGCAGATCATCGGAGGTGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219240.9
ENST00000571392.1
ENST00000572887.5
CDS TCA 72 bp ATCAGGCTTCCCGTCAGACGCTGTCCTCACCTCCGATaGTCTGCTCCAATGGCATCTGTGACTCCGCCAAAG +
Preference number: 6 (lower is better)
Translates to: IRLPVRRCPHLR*SAPMASVTPPK
Trigger: CTTTGGCGGAGTCACAGATGCCATTGGAGCAGATCATCGGAGGTGAGGACAGCGTCTGACGGGAAGCCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219240.9
ENST00000571392.1
ENST00000572887.5
ENST00000574309.5
CDS CAA 72 bp ATGGCCCAGAACTCTCACTTCCAGCATGTCAGAGTCTaGAAATCTGGCCCGTGGAAGGAGCCCCAGGGAGGT +
Preference number: 6 (lower is better)
Translates to: MAQNSHFQHVRV*KSGPWKEPQGG
Trigger: ACCTCCCTGGGGCTCCTTCCACGGGCCAGATTTCAAGACTCTGACATGCTGGAAGTGAGAGTTCTGGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219240.9
ENST00000572887.5
ENST00000574309.5
ENST00000576145.1
CDS TCA 72 bp CGGCCTTGGGTGAGTGCATACATCTCCCGAATGGTTTaGGTTGATAAATCCCGGAGGGGCTTCCCACTCAGC +
Preference number: 6 (lower is better)
Translates to: RPWVSAYISRMV*VDKSRRGFPLS
Trigger: GCTGAGTGGGAAGCCCCTCCGGGATTTATCAACTCAAACCATTCGGGAGATGTATGCACTCACCCAAGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219240.9
CDS TCA 72 bp AGGCAGTCCATCTGTAGTCCTAGCTGCTCGGGAGGCTaGAGTAGGATTGAGGCTCCAATGAACCGTGATCGC +
Preference number: 6 (lower is better)
Translates to: RQSICSPSCSGG*SRIEAPMNRDR
Trigger: GCGATCACGGTTCATTGGAGCCTCAATCCTACTTCAGCCTCCCGAGCAGCTAGGACTACAGATGGACTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572003.5
CDS TCA 72 bp GTCCTCACCTCCGATGATCTGCTCCAATGGCATCTGTaGCTCCGCCAAAGCCCTGCTCTCTTCTGTGAGCTT +
Preference number: 6 (lower is better)
Translates to: VLTSDDLLQWHL*LRQSPALFCEL
Trigger: AAGCTCACAGAAGAGAGCAGGGCTTTGGCGGAGTCACAGATGCCATTGGAGCAGATCATCGGAGGTGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574309.5
CDS GCA 72 bp AGAGGCAGTCCATCTTCTGTGAGCTTGGCCTGCTTCTaGTGTCTGGCCCGTAACCTGTGTTCCACCACTGAA +
Preference number: 6 (lower is better)
Translates to: RGSPSSVSLACF*CLARNLCSTTE
Trigger: TTCAGTGGTGGAACACAGGTTACGGGCCAGACAGCAGAAGCAGGCCAAGCTCACAGAAGATGGACTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219240.9
ENST00000572887.5
ENST00000573843.1
CDS GCA 72 bp CATCGATGCCCAACTTCTGTGAGCTTGGCCTGCTTCTaGTGTCTGGCCCGTAACCTGTGTTCCACCACTGAA +
Preference number: 6 (lower is better)
Translates to: HRCPTSVSLACF*CLARNLCSTTE
Trigger: TTCAGTGGTGGAACACAGGTTACGGGCCAGACAGCAGAAGCAGGCCAAGCTCACAGAAGTTGGGCATCGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571392.1
ENST00000573922.5
CDS GCA 72 bp GCAGAGCAAGACTCTTCTGTGAGCTTGGCCTGCTTCTaGTGTCTGGCCCGTAACCTGTGTTCCACCACTGAA +
Preference number: 6 (lower is better)
Translates to: AEQDSSVSLACF*CLARNLCSTTE
Trigger: TTCAGTGGTGGAACACAGGTTACGGGCCAGACAGCAGAAGCAGGCCAAGCTCACAGAAGAGTCTTGCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572003.5
CDS GCA 72 bp AAAGCCCTGCTCTCTTCTGTGAGCTTGGCCTGCTTCTaGTGTCTGGCCCGTAACCTGTGTTCCACCACTGAA +
Preference number: 6 (lower is better)
Translates to: KALLSSVSLACF*CLARNLCSTTE
Trigger: TTCAGTGGTGGAACACAGGTTACGGGCCAGACAGCAGAAGCAGGCCAAGCTCACAGAAGAGAGCAGGGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574309.5
CDS CCA 72 bp GTTGGGAGCATGTCCTACTCTAGTTTCATTCCCCGTTaGATCCGGCACACAACGCTAGGCGGTCATGTGTTC +
Preference number: 6 (lower is better)
Translates to: VGSMSYSSFIPR*IRHTTLGGHVF
Trigger: GAACACATGACCGCCTAGCGTTGTGTGCCGGATCCAACGGGGAATGAAACTAGAGTAGGACATGCTCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576145.1
CDS TCA 72 bp GGAACTTGGGTGAGTGCATACATCTCCCGAATGGTTTaGGTTGATAAATCCCGGAGGGGCTTCCCACTCAGC +
Preference number: 6 (lower is better)
Translates to: GTWVSAYISRMV*VDKSRRGFPLS
Trigger: GCTGAGTGGGAAGCCCCTCCGGGATTTATCAACTCAAACCATTCGGGAGATGTATGCACTCACCCAAGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572887.5
CDS TCA 72 bp TTGCCTTGGGTGAGTGCATACATCTCCCGAATGGTTTaGGTTGATAAATCCCGGAGGGGCTTCCCACTCAGC +
Preference number: 6 (lower is better)
Translates to: LPWVSAYISRMV*VDKSRRGFPLS
Trigger: GCTGAGTGGGAAGCCCCTCCGGGATTTATCAACTCAAACCATTCGGGAGATGTATGCACTCACCCAAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571392.1
CDS CAA 90 bp GCAGCTGCAAAGGATCCCTCATCCCCCTGGCCTTCATACAGAGCTTaGGCCCCACCTTTCTCCTGGCTTGGGATAGATACATACATATAT +
Preference number: 6 (lower is better)
Translates to: AAAKDPSSPWPSYRA*APPFSWLGIDTYIY
Trigger: ATATATGTATGTATCTATCCCAAGCCAGGAGAAAGGTGGGGCCAAAGCTCTGTATGAAGGCCAGGGGGATGAGGGATCCTTTGCAGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571392.1
CDS CCA 72 bp CTCTCTGACAAGCAAAAAGAAAACGCCCAGAGAAGTTaGACCAGAGTCTCAACACTGCCCTGGTGCTCAACC +
Preference number: 6 (lower is better)
Translates to: LSDKQKENAQRS*TRVSTLPWCST
Trigger: GGTTGAGCACCAGGGCAGTGTTGAGACTCTGGTCCAACTTCTCTGGGCGTTTTCTTTTTGCTTGTCAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571392.1
CDS CCA 72 bp GGATTTCGGAATTTATGGCCCAGAACTCTCACTTCCTaGGAAGAGGAAGACAAAGTCAGAGGCACGCTAAGG +
Preference number: 6 (lower is better)
Translates to: GFRNLWPRTLTS*EEEDKVRGTLR
Trigger: CCTTAGCGTGCCTCTGACTTTGTCTTCCTCTTCCCAGGAAGTGAGAGTTCTGGGCCATAAATTCCGAAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572003.5
CDS TCA 72 bp TTCCTCTTCCTCTTTGCCAGTGAAACCCACCTGCCCTaGTACAGGGTAAAAATGCTAATGACTCCTTTCCCA +
Preference number: 6 (lower is better)
Translates to: FLFLFASETHLP*YRVKMLMTPFP
Trigger: TGGGAAAGGAGTCATTAGCATTTTTACCCTGTATCAGGGCAGGTGGGTTTCACTGGCAAAGAGGAAGAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571392.1
CDS CCA 72 bp AATCCTGCAGCAATTCCTACTGGATTTCGGAATTTATaGCCCAGAACTCTCACTTCCAGCATGTCAGAGTCT +
Preference number: 6 (lower is better)
Translates to: NPAAIPTGFRNL*PRTLTSSMSES
Trigger: AGACTCTGACATGCTGGAAGTGAGAGTTCTGGGCCATAAATTCCGAAATCCAGTAGGAATTGCTGCAGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219240.9
ENST00000572887.5
ENST00000573922.5
ENST00000574309.5
ENST00000576145.1
CDS CAA 72 bp AAGCAAATATATTTTGCCTGGCCAATTCTGAAGATATaGATCCCCACCTGCAATGCAGCAGAAAGATCAATA +
Preference number: 6 (lower is better)
Translates to: KQIYFAWPILKI*IPTCNAAERSI
Trigger: TATTGATCTTTCTGCTGCATTGCAGGTGGGGATCAATATCTTCAGAATTGGCCAGGCAAAATATATTTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571392.1