Pregenerated sensors for DHFR (Homo sapiens)
Ensembl gene IDs: ENSG00000228716Ensembl transcript IDs: ENST00000439211.7, ENST00000504396.1, ENST00000505337.5, ENST00000511032.5
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTAGCTCCATAGCTGGAATATTGCCTGTGTTGGATCCTATTTGCTaGATTCATGTCATTCTCTGGTTTGTGTACTCCTTCATTTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: ASSIAGILPVLDPIC*IHVILWFVYSFILL Trigger: CAGCAAAATGAAGGAGTACACAAACCAGAGAATGACATGAATCCAGCAAATAGGATCCAACACAGGCAATATTCCAGCTATGGAGCTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| 3UTR CCA 90 bp | GCTTTTGGTATTTCCACTAGTGAAACTGCTCAGTTGAAGGGTATGTaGATCTTCATCTTTAATAAATATTACCAACATGTGAAAAGCCCG | + |
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Preference number: 1 (lower is better) Translates to: AFGISTSETAQLKGM*IFIFNKYYQHVKSP Trigger: CGGGCTTTTCACATGTTGGTAATATTTATTAAAGATGAAGATCCACATACCCTTCAACTGAGCAGTTTCACTAGTGGAAATACCAAAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000439211.7 ENST00000504396.1 ENST00000505337.5 ENST00000511032.5 |
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| 3UTR TCA 90 bp | ACACGTAGGAAGCTTTTGGTATTTCCACTAGTGAAACTGCTCAGTTaGAGGGTATGTGGATCTTCATCTTTAATAAATATTACCAACATG | + |
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Preference number: 1 (lower is better) Translates to: TRRKLLVFPLVKLLS*RVCGSSSLINITNM Trigger: CATGTTGGTAATATTTATTAAAGATGAAGATCCACATACCCTTCAACTGAGCAGTTTCACTAGTGGAAATACCAAAAGCTTCCTACGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000439211.7 ENST00000504396.1 ENST00000505337.5 ENST00000511032.5 |
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| 3UTR-3UTR CCA 90 bp | GGCCAGGCTGGTCTGGAACTCTTGGGCTCAAGTCGTCCTGCTGCTGAGCCTCCTCCGGCTGGAGTGCAGTaGCACAATCACGACTCACTG | + |
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Preference number: 2 (lower is better) Translates to: GQAGLELLGSSRPAAEPPPAGVQ*HNHDSL Trigger: CAGTGAGTCGTGATTGTGCCACTGCACTCCAGCCGG...AGGAGGCTCAGCAGCAGGACGACTTGAGCCCAAGAGTTCCAGACCAGCCTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| 3UTR-3UTR GCA 90 bp | CTGGTCTGGAACTCTTGGGCTCAAGTCGTCCTGCTGCTGAGCCTCCTGAGTAGCACAATCACGACTCACTaGAGCCTTGAACTCGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: LVWNSWAQVVLLLSLLSSTITTH*SLELVG Trigger: GCCCACGAGTTCAAGGCTGCAGTGAGTCGTGATTGT...GCTACTCAGGAGGCTCAGCAGCAGGACGACTTGAGCCCAAGAGTTCCAGACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| 3UTR-3UTR CCA 90 bp | CTGGTCTGGAACTCTTGGGCTCAAGTCGTCCTGCTGCTGAGCCTCCTGAGTAGCGCAGCCTTGAACTCGTaGGCTCAATTAATTCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: LVWNSWAQVVLLLSLLSSAALNS*AQLILP Trigger: TGGAAGAATTAATTGAGCCCACGAGTTCAAGGCTGC...GCTACTCAGGAGGCTCAGCAGCAGGACGACTTGAGCCCAAGAGTTCCAGACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| 3UTR-3UTR TCA 90 bp | CAATCTAAGACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGTTGTTTAATATTACCAACATGTaGAAAGCCCGACAATGTCAA | + |
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Preference number: 2 (lower is better) Translates to: QSKTETYSFSHHWTSRLFNITNM*KARQCQ Trigger: TTGACATTGTCGGGCTTTTCACATGTTGGTAATATT...AAACAACCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTTAGATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000439211.7 ENST00000504396.1 ENST00000505337.5 ENST00000511032.5 |
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| 3UTR-3UTR CCA 90 bp | ATGACAGATGAGGATTTAGCTCTTACACCATCACAATCTTCACTTTTCCTCCCACTGTTACAAACAAGGTaGCAACATTTATCTACAAAC | + |
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Preference number: 2 (lower is better) Translates to: MTDEDLALTPSQSSLFLPLLQTR*QHLSTN Trigger: GTTTGTAGATAAATGTTGCCACCTTGTTTGTAACAG...TGGGAGGAAAAGTGAAGATTGTGATGGTGTAAGAGCTAAATCCTCATCTGTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| 3UTR-3UTR TCA 90 bp | AAGACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGTTGTTTTCAATTAATATTACCAACATGTaGAAAGCCCGACAATGTCAA | + |
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Preference number: 2 (lower is better) Translates to: KTETYSFSHHWTSRLFSINITNM*KARQCQ Trigger: TTGACATTGTCGGGCTTTTCACATGTTGGTAATATT...AATTGAAAACAACCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000439211.7 ENST00000504396.1 ENST00000505337.5 ENST00000511032.5 |
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| 3UTR-3UTR TCA 90 bp | TTTCACTGTTACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACAAATATTACCAACATGTaGAAAGCCCGACAATGTCAA | + |
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Preference number: 2 (lower is better) Translates to: FHCYKQGGNIYLQTSGYTNITNM*KARQCQ Trigger: TTGACATTGTCGGGCTTTTCACATGTTGGTAATATT...TGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTAACAGTGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000439211.7 ENST00000504396.1 ENST00000505337.5 ENST00000511032.5 |
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| 3UTR-3UTR CAA 90 bp | GGCCAGGCTGGTCTGGAACTCTTGGGCTCAAGTCGTCCTGCTGCTGAGCCTCCTCGACTCACTGCAGCCTaGAACTCGTGGGCTCAATTA | + |
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Preference number: 3 (lower is better) Translates to: GQAGLELLGSSRPAAEPPRLTAA*NSWAQL Trigger: TAATTGAGCCCACGAGTTCAAGGCTGCAGTGAGTCG...AGGAGGCTCAGCAGCAGGACGACTTGAGCCCAAGAGTTCCAGACCAGCCTGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| 3UTR-3UTR CAA 90 bp | CTGGTCTGGAACTCTTGGGCTCAAGTCGTCCTGCTGCTGAGCCTCCTGAGTAGCCACTGGACTTCCAGGTaGTTTTCAATTTTTCACTGT | + |
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Preference number: 3 (lower is better) Translates to: LVWNSWAQVVLLLSLLSSHWTSR*FSIFHC Trigger: ACAGTGAAAAATTGAAAACAACCTGGAAGTCCAGTG...GCTACTCAGGAGGCTCAGCAGCAGGACGACTTGAGCCCAAGAGTTCCAGACCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| 3UTR GCA 72 bp | TCCATAGCTGGAATATTGCCTGTGTTGGATCCTATTTaGTGGATTCATGTCATTCTCTGGTTTGTGTACTCC | + |
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Preference number: 3 (lower is better) Translates to: SIAGILPVLDPI*WIHVILWFVYS Trigger: GGAGTACACAAACCAGAGAATGACATGAATCCAGCAAATAGGATCCAACACAGGCAATATTCCAGCTATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| 3UTR CCA 72 bp | ATAGCTGGAATATTGCCTGTGTTGGATCCTATTTGCTaGATTCATGTCATTCTCTGGTTTGTGTACTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: IAGILPVLDPIC*IHVILWFVYSF Trigger: GAAGGAGTACACAAACCAGAGAATGACATGAATCCAGCAAATAGGATCCAACACAGGCAATATTCCAGCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR CCA 90 bp | CTGGTCTGGAACTCTTGGGCTCAAGTCGTCCTGCTGCTGAGCCTCCTGAGTAGCGTGCAGCCGACCAGGTaGACCCTGGCGCTGCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: LVWNSWAQVVLLLSLLSSVQPTR*TLALQR Trigger: CCGCTGCAGCGCCAGGGTCCACCTGGTCGGCTGCAC...GCTACTCAGGAGGCTCAGCAGCAGGACGACTTGAGCCCAAGAGTTCCAGACCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR GCA 90 bp | TGCTGGATTCATGTCATTCTCTGGTTTGTGTACTCCTTCATTTTGCTGGAGTATGTCTCGCCGGAAGCCTaGGTCGGGCGGCCTCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: CWIHVILWFVYSFILLEYVSPEA*VGRPRC Trigger: GCAGCGAGGCCGCCCGACGCAGGCTTCCGGCGAGAC...ATACTCCAGCAAAATGAAGGAGTACACAAACCAGAGAATGACATGAATCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR GCA 90 bp | GTTCCCCAATCTAAGACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGCCGGGCTGCCATCCTTaGCCTGCCATGTCTCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: VPQSKTETYSFSHHWTSRPGCHP*PAMSRR Trigger: CCGGCGAGACATGGCAGGGCAAGGATGGCAGCCCGG...CCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTTAGATTGGGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR GCA 90 bp | ACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGTAGGAAGCCAGACGCCTGGGAACTaGGGCCGCGGGCTCGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: TNKVATFIYKPLDIHVGSQTPGN*GRGLAL Trigger: GAGCGCGAGCCCGCGGCCGCAGTTCCCAGGCGTCTG...GCTTCCTACGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR CCA 90 bp | GGCCAGGCTGGTCTGGAACTCTTGGGCTCAAGTCGTCCTGCTGCTGAGCCTCCTTCTTGCAATCTGCTTTaGGTTCCCCAATCTAAGACA | + |
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Preference number: 4 (lower is better) Translates to: GQAGLELLGSSRPAAEPPSCNLL*VPQSKT Trigger: TGTCTTAGATTGGGGAACCCAAAGCAGATTGCAAGA...AGGAGGCTCAGCAGCAGGACGACTTGAGCCCAAGAGTTCCAGACCAGCCTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR TCA 90 bp | GGCCAGGCTGGTCTGGAACTCTTGGGCTCAAGTCGTCCTGCTGCTGAGCCTCCTCCATCATCCCTCACTTaGACTTATAATTGGTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: GQAGLELLGSSRPAAEPPPSSLT*TYNWFS Trigger: GGAAAACCAATTATAAGTTCAAGTGAGGGATGATGG...AGGAGGCTCAGCAGCAGGACGACTTGAGCCCAAGAGTTCCAGACCAGCCTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR GCA 90 bp | ATGACAGATGAGGATTTAGCTCTTACACCATCACAATCTTCACTTTTCCTCCCACTCCTCGCCAGGCCCTaGCGCCGGGCTGCCATCCTT | + |
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Preference number: 4 (lower is better) Translates to: MTDEDLALTPSQSSLFLPLLARP*RRAAIL Trigger: AAGGATGGCAGCCCGGCGGCAGGGCCTGGCGAGGAG...TGGGAGGAAAAGTGAAGATTGTGATGGTGTAAGAGCTAAATCCTCATCTGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR GCA 90 bp | TTTGGTATTTCCACTAGTGAAACTGCTCAGTTGAAGGGTATGTGGATCTTCATCCCTCGTCCCCATTTGTaGAGGCGAGGCCCCGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: FGISTSETAQLKGMWIFIPRPHL*RRGPAP Trigger: GGGGGCGGGGCCTCGCCTGCACAAATGGGGACGAGG...GATGAAGATCCACATACCCTTCAACTGAGCAGTTTCACTAGTGGAAATACCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000439211.7 ENST00000505337.5 |
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| CDS-3UTR GCA 90 bp | GTTACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGTAGGAGCCCTGCCGCCGGGCTaGCATCCTTGCCCTGCCATG | + |
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Preference number: 4 (lower is better) Translates to: VTNKVATFIYKPLDIHVGALPPG*HPCPAM Trigger: CATGGCAGGGCAAGGATGGCAGCCCGGCGGCAGGGC...TCCTACGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR GCA 90 bp | TCACTGTTACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGCCTCGTCCCCATTTGTaGAGGCGAGGCCCCGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: SLLQTRWQHLSTNLWIYTPRPHL*RRGPAP Trigger: GGGGGCGGGGCCTCGCCTGCACAAATGGGGACGAGG...CGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTAACAGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000439211.7 ENST00000505337.5 |
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| CDS-3UTR CCA 90 bp | CTAAGACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGTTGTTTTCAACGACCAGGTGGACCCTaGCGCTGCAGCGGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LRQKHTHFPITGLPGCFQRPGGP*RCSGCS Trigger: GCTGCAGCCGCTGCAGCGCCAGGGTCCACCTGGTCG...TTGAAAACAACCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR GCA 90 bp | TGCTGGATTCATGTCATTCTCTGGTTTGTGTACTCCTTCATTTTGCTGGAGTATCTCCTCCTCCACAGGTaGAGCCGACCAGGTGGACCC | + |
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Preference number: 4 (lower is better) Translates to: CWIHVILWFVYSFILLEYLLLHR*SRPGGP Trigger: GGGTCCACCTGGTCGGCTGCACCTGTGGAGGAGGAG...ATACTCCAGCAAAATGAAGGAGTACACAAACCAGAGAATGACATGAATCCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR CCA 90 bp | CTGGTCTGGAACTCTTGGGCTCAAGTCGTCCTGCTGCTGAGCCTCCTGAGTAGCTTGGATCCTATTTGCTaGATTCATGTCATTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LVWNSWAQVVLLLSLLSSLDPIC*IHVILW Trigger: CCAGAGAATGACATGAATCCAGCAAATAGGATCCAA...GCTACTCAGGAGGCTCAGCAGCAGGACGACTTGAGCCCAAGAGTTCCAGACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR TCA 90 bp | GTTCCCCAATCTAAGACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGCAGATTCTGTTTACCTaGGCGGTGGCCAGGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: VPQSKTETYSFSHHWTSRQILFT*AVARAG Trigger: ACCTGCCCTGGCCACCGCTCAGGTAAACAGAATCTG...CCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTTAGATTGGGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504396.1 |
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| CDS-3UTR GCA 90 bp | ACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGTAGGAAGCCTGCCATCCTTGCCCTaGCATGTCTCGCCGGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: TNKVATFIYKPLDIHVGSLPSLP*HVSPEA Trigger: GGCTTCCGGCGAGACATGGCAGGGCAAGGATGGCAG...GCTTCCTACGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR GCA 90 bp | TTTGGGTTCCCCAATCTAAGACAGAAACATACTCATTTTCCCATCACTGGACTTCTCCAGCTCAGCCCCTaGGAGGCAAGCGGTTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: FGFPNLRQKHTHFPITGLLQLSP*EASGFE Trigger: CTCAAAACCGCTTGCCTCGCAGGGGCTGAGCTGGAG...AAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTTAGATTGGGGAACCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR GCA 90 bp | GTTCCCCAATCTAAGACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGACAATCACGACTCACTaGAGCCTTGAACTCGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: VPQSKTETYSFSHHWTSRTITTH*SLELVG Trigger: GCCCACGAGTTCAAGGCTGCAGTGAGTCGTGATTGT...CCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTTAGATTGGGGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR GCA 90 bp | CACTGTTACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGTTGGGAAGGCGGAGGTTaGAGTAAGCCGAGGTCACAC | + |
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Preference number: 4 (lower is better) Translates to: HCYKQGGNIYLQTSGYTRWEGGG*SKPRSH Trigger: GTGTGACCTCGGCTTACTGCAACCTCCGCCTTCCCA...ACGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTAACAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000439211.7 ENST00000505337.5 ENST00000511032.5 |
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| CDS-3UTR GCA 90 bp | TACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGTAGGAAGTGGGAAGGCGGAGGTTaGAGTAAGCCGAGGTCACAC | + |
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Preference number: 4 (lower is better) Translates to: YKQGGNIYLQTSGYTRRKWEGGG*SKPRSH Trigger: GTGTGACCTCGGCTTACTGCAACCTCCGCCTTCCCA...CTTCCTACGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000439211.7 ENST00000505337.5 ENST00000511032.5 |
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| CDS-3UTR GCA 90 bp | CTAAGACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGTTGTTTTCAATGGGAAGGCGGAGGTTaGAGTAAGCCGAGGTCACAC | + |
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Preference number: 4 (lower is better) Translates to: LRQKHTHFPITGLPGCFQWEGGG*SKPRSH Trigger: GTGTGACCTCGGCTTACTGCAACCTCCGCCTTCCCA...TTGAAAACAACCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000439211.7 ENST00000505337.5 ENST00000511032.5 |
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| CDS-3UTR CCA 90 bp | TTTGGTATTTCCACTAGTGAAACTGCTCAGTTGAAGGGTATGTGGATCTTCATCCTGGTCCTAGCTACTTaGGAGCCTGAGGCAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: FGISTSETAQLKGMWIFILVLAT*EPEAGE Trigger: TTCTCCTGCCTCAGGCTCCCAAGTAGCTAGGACCAG...GATGAAGATCCACATACCCTTCAACTGAGCAGTTTCACTAGTGGAAATACCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000439211.7 ENST00000505337.5 |
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| CDS-3UTR CCA 90 bp | CTAAGACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGTTGTTTTCAAGTGGCCAGGCTGGTCTaGAACTCTTGGGCTCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: LRQKHTHFPITGLPGCFQVARLV*NSWAQV Trigger: GACTTGAGCCCAAGAGTTCCAGACCAGCCTGGCCAC...TTGAAAACAACCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR CCA 90 bp | CACTGTTACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGTCTAAGGTGGCCAGGCTaGTCTGGAACTCTTGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: HCYKQGGNIYLQTSGYTRLRWPG*SGTLGL Trigger: GAGCCCAAGAGTTCCAGACCAGCCTGGCCACCTTAG...ACGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTAACAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR CCA 90 bp | TGTTACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGTAGGCTGGTCCTAGCTACTTaGGAGCCTGAGGCAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: CYKQGGNIYLQTSGYTRRLVLAT*EPEAGE Trigger: TTCTCCTGCCTCAGGCTCCCAAGTAGCTAGGACCAG...CCTACGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000439211.7 ENST00000505337.5 |
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| CDS-3UTR CCA 90 bp | CACTGTTACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGTGGGATCTCACTAAGGTaGCCAGGCTGGTCTGGAACT | + |
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Preference number: 4 (lower is better) Translates to: HCYKQGGNIYLQTSGYTRGISLR*PGWSGT Trigger: AGTTCCAGACCAGCCTGGCCACCTTAGTGAGATCCC...ACGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTAACAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR TCA 90 bp | CTAAGACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGTTGTTTTCAACGAGGCAAGCGGTTTTaGGCCGATTCTTCCAGTCTA | + |
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Preference number: 4 (lower is better) Translates to: LRQKHTHFPITGLPGCFQRGKRF*ADSSSL Trigger: TAGACTGGAAGAATCGGCTCAAAACCGCTTGCCTCG...TTGAAAACAACCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR CCA 90 bp | TGTTACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGTAGGCCATGTTGCCCAAGCTaGTCTCAAGTGATCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: CYKQGGNIYLQTSGYTRRPCCPS*SQVICL Trigger: CAGGCAGATCACTTGAGACCAGCTTGGGCAACATGG...CCTACGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR CCA 90 bp | GTTCCCCAATCTAAGACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGTCTTGCAATCTGCTTTaGGTTCCCCAATCTAAGACA | + |
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Preference number: 4 (lower is better) Translates to: VPQSKTETYSFSHHWTSRSCNLL*VPQSKT Trigger: TGTCTTAGATTGGGGAACCCAAAGCAGATTGCAAGA...CCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTTAGATTGGGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000439211.7 ENST00000504396.1 ENST00000505337.5 ENST00000511032.5 |
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| 3UTR CAA 72 bp | CTCCATAGCTGGAATATTGCCTGTGTTGGATCCTATTaGCTGGATTCATGTCATTCTCTGGTTTGTGTACTC | + |
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Preference number: 4 (lower is better) Translates to: LHSWNIACVGSY*LDSCHSLVCVL Trigger: GAGTACACAAACCAGAGAATGACATGAATCCAGCAAATAGGATCCAACACAGGCAATATTCCAGCTATGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR TCA 90 bp | ACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGTAGGAAGCGCAGTCACATCATTATaGCTGTGTACATACTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TNKVATFIYKPLDIHVGSAVTSL*LCTYCS Trigger: GGAGCAGTATGTACACAGTCATAATGATGTGACTGC...GCTTCCTACGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR CCA 90 bp | CAATCTAAGACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGTTGTTTGCATCTGAAACTCCCTaGGCCCAAAACCAAAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: QSKTETYSFSHHWTSRLFASETP*AQNQSQ Trigger: TTGACTTTGGTTTTGGGCCCAGGGAGTTTCAGATGC...AAACAACCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTTAGATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR CCA 90 bp | ATGACAGATGAGGATTTAGCTCTTACACCATCACAATCTTCACTTTTCCTCCCAGCAGCCTTGAACTCGTaGGCTCAATTAATTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MTDEDLALTPSQSSLFLPAALNS*AQLILP Trigger: TGGAAGAATTAATTGAGCCCACGAGTTCAAGGCTGC...TGGGAGGAAAAGTGAAGATTGTGATGGTGTAAGAGCTAAATCCTCATCTGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS-3UTR TCA 90 bp | GTTCCCCAATCTAAGACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGAATATTACCAACATGTaGAAAGCCCGACAATGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VPQSKTETYSFSHHWTSRNITNM*KARQCQ Trigger: TTGACATTGTCGGGCTTTTCACATGTTGGTAATATT...CCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTTAGATTGGGGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000439211.7 ENST00000504396.1 ENST00000505337.5 ENST00000511032.5 |
||
| CDS-3UTR TCA 90 bp | GTTCCCCAATCTAAGACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGCATACTGCTCCTTGTTaGGAAAAACAGTGTATTATG | + |
|
Preference number: 4 (lower is better) Translates to: VPQSKTETYSFSHHWTSRHTAPC*EKQCIM Trigger: CATAATACACTGTTTTTCTCAACAAGGAGCAGTATG...CCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTTAGATTGGGGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS-3UTR TCA 90 bp | TTTGGGTTCCCCAATCTAAGACAGAAACATACTCATTTTCCCATCACTGGACTTCCAAAAGTCTTACAATaGAAACAACAGTCCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FGFPNLRQKHTHFPITGLPKVLQ*KQQSCQ Trigger: CTGGCAGGACTGTTGTTTTCATTGTAAGACTTTTGG...AAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTTAGATTGGGGAACCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS-3UTR CCA 90 bp | TTTGGGTTCCCCAATCTAAGACAGAAACATACTCATTTTCCCATCACTGGACTTTCTTGCAATCTGCTTTaGGTTCCCCAATCTAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: FGFPNLRQKHTHFPITGLSCNLL*VPQSKT Trigger: TGTCTTAGATTGGGGAACCCAAAGCAGATTGCAAGA...AAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTTAGATTGGGGAACCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000439211.7 ENST00000504396.1 ENST00000505337.5 ENST00000511032.5 |
||
| CDS-3UTR CCA 90 bp | GTTCCCCAATCTAAGACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGATCAGAGAGAACACCTaGGTATCTTATAAACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VPQSKTETYSFSHHWTSRIRENT*VSYKQN Trigger: GTTCTGTTTATAAGATACCCAGGTGTTCTCTCTGAT...CCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTTAGATTGGGGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511032.5 |
||
| CDS-3UTR TCA 90 bp | CACTGTTACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGTTCTGGATATGACAGATaGGGATTTAGCTCTTACACC | + |
|
Preference number: 4 (lower is better) Translates to: HCYKQGGNIYLQTSGYTRSGYDR*GFSSYT Trigger: GGTGTAAGAGCTAAATCCTCATCTGTCATATCCAGA...ACGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTAACAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS-3UTR GCA 90 bp | TTTGGGTTCCCCAATCTAAGACAGAAACATACTCATTTTCCCATCACTGGACTTTGTACTCCTTCATTTTaGTGGAGTATTTTCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FGFPNLRQKHTHFPITGLCTPSF*WSIFSN Trigger: GTTGGAGAAAATACTCCAGCAAAATGAAGGAGTACA...AAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTTAGATTGGGGAACCCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS-3UTR CCA 90 bp | GTTACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGTAGGATCATTTTCCCATCACTaGACTTCCAGGTTGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VTNKVATFIYKPLDIHVGSFSHH*TSRLFS Trigger: TGAAAACAACCTGGAAGTCCAGTGATGGGAAAATGA...TCCTACGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000439211.7 ENST00000504396.1 ENST00000505337.5 ENST00000511032.5 |
||
| CDS-3UTR CCA 90 bp | CAATCTAAGACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGTTGTTTTCATTTTCCCATCACTaGACTTCCAGGTTGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSKTETYSFSHHWTSRLFSFSHH*TSRLFS Trigger: TGAAAACAACCTGGAAGTCCAGTGATGGGAAAATGA...AAACAACCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTTAGATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENST00000439211.7 ENST00000504396.1 ENST00000505337.5 ENST00000511032.5 |
||
| CDS-3UTR CCA 90 bp | CACTGTTACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGTTCATTTTCCCATCACTaGACTTCCAGGTTGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HCYKQGGNIYLQTSGYTRSFSHH*TSRLFS Trigger: TGAAAACAACCTGGAAGTCCAGTGATGGGAAAATGA...ACGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTAACAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000439211.7 ENST00000504396.1 ENST00000505337.5 ENST00000511032.5 |
||
| CDS-3UTR CCA 90 bp | GTTACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGTAGGAGAATATTGCCTGTGTTaGATCCTATTTGCTGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: VTNKVATFIYKPLDIHVGEYCLC*ILFAGF Trigger: GAATCCAGCAAATAGGATCCAACACAGGCAATATTC...TCCTACGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS-3UTR TCA 90 bp | GTTACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGTAGGAAATATTACCAACATGTaGAAAGCCCGACAATGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VTNKVATFIYKPLDIHVGNITNM*KARQCQ Trigger: TTGACATTGTCGGGCTTTTCACATGTTGGTAATATT...TCCTACGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000439211.7 ENST00000504396.1 ENST00000505337.5 ENST00000511032.5 |
||
| CDS-3UTR TCA 90 bp | CTAAGACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGTTGTTTTCAAAATATTACCAACATGTaGAAAGCCCGACAATGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRQKHTHFPITGLPGCFQNITNM*KARQCQ Trigger: TTGACATTGTCGGGCTTTTCACATGTTGGTAATATT...TTGAAAACAACCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000439211.7 ENST00000504396.1 ENST00000505337.5 ENST00000511032.5 |
||
| CDS-3UTR TCA 90 bp | TACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGTAGGAAGAATATTACCAACATGTaGAAAGCCCGACAATGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: YKQGGNIYLQTSGYTRRKNITNM*KARQCQ Trigger: TTGACATTGTCGGGCTTTTCACATGTTGGTAATATT...CTTCCTACGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000439211.7 ENST00000504396.1 ENST00000505337.5 ENST00000511032.5 |
||
| CDS-3UTR GCA 90 bp | CACTGTTACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGTCAATTTCTTACTACATaGAACCCTTTGGTTCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HCYKQGGNIYLQTSGYTRQFLTT*NPLVQA Trigger: TGCTTGAACCAAAGGGTTGCATGTAGTAAGAAATTG...ACGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTAACAGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS-3UTR CCA 90 bp | ACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGTTGTTTTCAATTTTTTCTTGCAATCTGCTTTaGGTTCCCCAATCTAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: TETYSFSHHWTSRLFSIFSCNLL*VPQSKT Trigger: TGTCTTAGATTGGGGAACCCAAAGCAGATTGCAAGA...AAAAATTGAAAACAACCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENST00000439211.7 ENST00000504396.1 ENST00000505337.5 ENST00000511032.5 |
||
| CDS-3UTR CCA 90 bp | ACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGTAGGAAGCATTCATGTCATTCTCTaGTTTGTGTACTCCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: TNKVATFIYKPLDIHVGSIHVIL*FVYSFI Trigger: AATGAAGGAGTACACAAACCAGAGAATGACATGAAT...GCTTCCTACGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS-3UTR CCA 90 bp | CAATCTAAGACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGTTGTTTCTGTTACAAACAAGGTaGCAACATTTATCTACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QSKTETYSFSHHWTSRLFLLQTR*QHLSTN Trigger: GTTTGTAGATAAATGTTGCCACCTTGTTTGTAACAG...AAACAACCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTTAGATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000439211.7 ENST00000504396.1 ENST00000505337.5 ENST00000511032.5 |
||
| CDS-3UTR CCA 90 bp | TCACTGTTACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGCTGTTACAAACAAGGTaGCAACATTTATCTACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLLQTRWQHLSTNLWIYTLLQTR*QHLSTN Trigger: GTTTGTAGATAAATGTTGCCACCTTGTTTGTAACAG...CGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTAACAGTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000439211.7 ENST00000504396.1 ENST00000505337.5 ENST00000511032.5 |
||
| CDS-3UTR CCA 90 bp | TTTCACTGTTACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACATCATTTTCCCATCACTaGACTTCCAGGTTGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FHCYKQGGNIYLQTSGYTSFSHH*TSRLFS Trigger: TGAAAACAACCTGGAAGTCCAGTGATGGGAAAATGA...TGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTAACAGTGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000439211.7 ENST00000504396.1 ENST00000505337.5 ENST00000511032.5 |
||
| CDS-3UTR CCA 90 bp | TTTCACTGTTACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACAACTCCTTCATTTTGCTaGAGTATTTTCTCCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: FHCYKQGGNIYLQTSGYTTPSFC*SIFSNS Trigger: GCTGTTGGAGAAAATACTCCAGCAAAATGAAGGAGT...TGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTAACAGTGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| 3UTR CAA 72 bp | GAAGCTTTTGGTATTTCCACTAGTGAAACTGCTCAGTaGAAGGGTATGTGGATCTTCATCTTTAATAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: EAFGISTSETAQ*KGMWIFIFNKY Trigger: ATATTTATTAAAGATGAAGATCCACATACCCTTCAACTGAGCAGTTTCACTAGTGGAAATACCAAAAGCTTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000439211.7 ENST00000504396.1 ENST00000505337.5 ENST00000511032.5 |
||
| CDS-3UTR CCA 90 bp | ACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGTTGTTTTCAATTTTTCTGTTACAAACAAGGTaGCAACATTTATCTACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TETYSFSHHWTSRLFSIFLLQTR*QHLSTN Trigger: GTTTGTAGATAAATGTTGCCACCTTGTTTGTAACAG...AAAAATTGAAAACAACCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000439211.7 ENST00000504396.1 ENST00000505337.5 ENST00000511032.5 |
||
| CDS GCA 90 bp | CGGGCTCGCGCTCCTCGCCAGGCCCTGCCGCCGGGCTGCCATCCTTaGCCTGCCATGTCTCGCCGGAAGCCTGCGTCGGGCGGCCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RARAPRQALPPGCHP*PAMSRRKPASGGLA Trigger: AGCGAGGCCGCCCGACGCAGGCTTCCGGCGAGACATGGCAGGGCAAGGATGGCAGCCCGGCGGCAGGGCCTGGCGAGGAGCGCGAGCCCG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS GCA 90 bp | ACGCCTGGGAACTGCGGCCGCGGGCTCGCGCTCCTCGCCAGGCCCTaGCGCCGGGCTGCCATCCTTGCCCTGCCATGTCTCGCCGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TPGNCGRGLALLARP*RRAAILALPCLAGS Trigger: GCTTCCGGCGAGACATGGCAGGGCAAGGATGGCAGCCCGGCGGCAGGGCCTGGCGAGGAGCGCGAGCCCGCGGCCGCAGTTCCCAGGCGT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS GCA 90 bp | GCCGCCGGGCTGCCATCCTTGCCCTGCCATGTCTCGCCGGAAGCCTaGGTCGGGCGGCCTCGCTGCCTCCAGCTCAGCCCCTGCGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AAGLPSLPCHVSPEA*VGRPRCLQLSPCEA Trigger: TGCCTCGCAGGGGCTGAGCTGGAGGCAGCGAGGCCGCCCGACGCAGGCTTCCGGCGAGACATGGCAGGGCAAGGATGGCAGCCCGGCGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS GCA 90 bp | CTTCCAGTCTACGGGAAGCCTGAAATCCACCTCCTCCTCCACAGGTaGAGCCGACCAGGTGGACCCTGGCGCTGCAGCGGCTGCAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LPVYGKPEIHLLLHR*SRPGGPWRCSGCSG Trigger: GCCGCTGCAGCCGCTGCAGCGCCAGGGTCCACCTGGTCGGCTGCACCTGTGGAGGAGGAGGTGGATTTCAGGCTTCCCGTAGACTGGAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS GCA 90 bp | CCGGAAGCCTGCGTCGGGCGGCCTCGCTGCCTCCAGCTCAGCCCCTaGGAGGCAAGCGGTTTTGAGCCGATTCTTCCAGTCTACGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PEACVGRPRCLQLSP*EASGFEPILPVYGK Trigger: CTTCCCGTAGACTGGAAGAATCGGCTCAAAACCGCTTGCCTCGCAGGGGCTGAGCTGGAGGCAGCGAGGCCGCCCGACGCAGGCTTCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS-3UTR CAA 90 bp | ACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGTTGTTTTCAATTTTTGCCGGGCTGCCATCCTaGCCCTGCCATGTCTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TETYSFSHHWTSRLFSIFAGLPS*PCHVSP Trigger: CGGCGAGACATGGCAGGGCAAGGATGGCAGCCCGGC...AAAAATTGAAAACAACCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS-3UTR CAA 90 bp | TTTGGGTTCCCCAATCTAAGACAGAAACATACTCATTTTCCCATCACTGGACTTGCTGGTCTGGAACTCTaGGGCTCAAGTCGTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FGFPNLRQKHTHFPITGLAGLEL*GSSRPA Trigger: AGCAGGACGACTTGAGCCCAAGAGTTCCAGACCAGC...AAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTTAGATTGGGGAACCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS-3UTR CAA 90 bp | TTTGGTATTTCCACTAGTGAAACTGCTCAGTTGAAGGGTATGTGGATCTTCATCGCGAGGCAAGCGGTTTaGAGCCGATTCTTCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FGISTSETAQLKGMWIFIARQAV*SRFFQS Trigger: AGACTGGAAGAATCGGCTCAAAACCGCTTGCCTCGC...GATGAAGATCCACATACCCTTCAACTGAGCAGTTTCACTAGTGGAAATACCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS-3UTR CAA 90 bp | TTTGGGTTCCCCAATCTAAGACAGAAACATACTCATTTTCCCATCACTGGACTTTGGGGCTTTGCCATGTaGCCCAAGCTGGTCTCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: FGFPNLRQKHTHFPITGLWGFAM*PKLVSS Trigger: ACTTGAGACCAGCTTGGGCAACATGGCAAAGCCCCA...AAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTTAGATTGGGGAACCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS-3UTR CAA 90 bp | ATGACAGATGAGGATTTAGCTCTTACACCATCACAATCTTCACTTTTCCTCCCACGACTCACTGCAGCCTaGAACTCGTGGGCTCAATTA | + |
|
Preference number: 5 (lower is better) Translates to: MTDEDLALTPSQSSLFLPRLTAA*NSWAQL Trigger: TAATTGAGCCCACGAGTTCAAGGCTGCAGTGAGTCG...TGGGAGGAAAAGTGAAGATTGTGATGGTGTAAGAGCTAAATCCTCATCTGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS-3UTR CAA 90 bp | TTTCACTGTTACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACAAGGCAGGAGAATCGCTaGAATCTGGGAAGGCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FHCYKQGGNIYLQTSGYTRQENR*NLGRRR Trigger: CCTCCGCCTTCCCAGATTCAAGCGATTCTCCTGCCT...TGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTAACAGTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000439211.7 ENST00000505337.5 |
||
| CDS-3UTR CAA 90 bp | TGCTGGATTCATGTCATTCTCTGGTTTGTGTACTCCTTCATTTTGCTGGAGTATCAACAGTCCTGCCAGTaGTTCTTTCCAGAGGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: CWIHVILWFVYSFILLEYQQSCQ*FFPEAN Trigger: ATTTGCCTCTGGAAAGAACAACTGGCAGGACTGTTG...ATACTCCAGCAAAATGAAGGAGTACACAAACCAGAGAATGACATGAATCCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS-3UTR CAA 90 bp | CTAAGACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGTTGTTTTCAAGGAATATTGCCTGTGTaGGATCCTATTTGCTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: LRQKHTHFPITGLPGCFQGILPV*DPICWI Trigger: AATCCAGCAAATAGGATCCAACACAGGCAATATTCC...TTGAAAACAACCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS-3UTR CAA 90 bp | TCACTGTTACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGTCCATAGCTGGAATATaGCCTGTGTTGGATCCTATT | + |
|
Preference number: 5 (lower is better) Translates to: SLLQTRWQHLSTNLWIYTSIAGI*PVLDPI Trigger: AATAGGATCCAACACAGGCAATATTCCAGCTATGGA...CGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTAACAGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS-3UTR CAA 90 bp | TCACTGTTACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGCACTGGACTTCCAGGTaGTTTTCAATTTTTCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: SLLQTRWQHLSTNLWIYTHWTSR*FSIFHC Trigger: ACAGTGAAAAATTGAAAACAACCTGGAAGTCCAGTG...CGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTAACAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000439211.7 ENST00000504396.1 ENST00000505337.5 ENST00000511032.5 |
||
| CDS-3UTR CAA 90 bp | TGTTACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGTAGGCACTGGACTTCCAGGTaGTTTTCAATTTTTCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: CYKQGGNIYLQTSGYTRRHWTSR*FSIFHC Trigger: ACAGTGAAAAATTGAAAACAACCTGGAAGTCCAGTG...CCTACGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000439211.7 ENST00000504396.1 ENST00000505337.5 ENST00000511032.5 |
||
| CDS-3UTR CAA 90 bp | ACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGTTGTTTTCAATTTTTACTACATGCAACCCTTaGGTTCAAGCAACCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: TETYSFSHHWTSRLFSIFTTCNP*VQATII Trigger: GATGATGGTTGCTTGAACCAAAGGGTTGCATGTAGT...AAAAATTGAAAACAACCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS-3UTR CAA 90 bp | AAGACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGTTGTTTTCAATTGAAGGCATGGTTCCATaGTTTTCAGATTCCTTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: KTETYSFSHHWTSRLFSIEGMVP*FSDSFS Trigger: CGAAAAGGAATCTGAAAACAATGGAACCATGCCTTC...AATTGAAAACAACCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS-3UTR CAA 90 bp | TACAAACAAGGTGGCAACATTTATCTACAAACCTCTGGATATACACGTAGGAAGGTGTACTCCTTCATTTaGCTGGAGTATTTTCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: YKQGGNIYLQTSGYTRRKVYSFI*LEYFLQ Trigger: TTGGAGAAAATACTCCAGCAAAATGAAGGAGTACAC...CTTCCTACGTGTATATCCAGAGGTTTGTAGATAAATGTTGCCACCTTGTTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439211.7 |
||
| CDS-3UTR CAA 90 bp | TGCTGGATTCATGTCATTCTCTGGTTTGTGTACTCCTTCATTTTGCTGGAGTATTGTACATACTGCTCCTaGTTGAGAAAAACAGTGTAT | + |
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Preference number: 5 (lower is better) Translates to: CWIHVILWFVYSFILLEYCTYCS*LRKTVY Trigger: ATACACTGTTTTTCTCAACAAGGAGCAGTATGTACA...ATACTCCAGCAAAATGAAGGAGTACACAAACCAGAGAATGACATGAATCCAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR CAA 90 bp | AAGACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGTTGTTTTCAATTACTTTTCCTCCCATATaGTCCCAGAGTAGTTACCAT | + |
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Preference number: 5 (lower is better) Translates to: KTETYSFSHHWTSRLFSITFPPI*SQSSYH Trigger: ATGGTAACTACTCTGGGACAATATGGGAGGAAAAGT...AATTGAAAACAACCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS-3UTR CAA 90 bp | AAGACAGAAACATACTCATTTTCCCATCACTGGACTTCCAGGTTGTTTTCAATTCACTGGACTTCCAGGTaGTTTTCAATTTTTCACTGT | + |
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Preference number: 5 (lower is better) Translates to: KTETYSFSHHWTSRLFSIHWTSR*FSIFHC Trigger: ACAGTGAAAAATTGAAAACAACCTGGAAGTCCAGTG...AATTGAAAACAACCTGGAAGTCCAGTGATGGGAAAATGAGTATGTTTCTGTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENST00000439211.7 ENST00000504396.1 ENST00000505337.5 ENST00000511032.5 |
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| CDS CCA 72 bp | ACGCAGGGTCGCGGCGTGCTCGCGCCCGCAGACGCCTaGGAACTGCGGCCGCGGGCTCGCGCTCCTCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: TQGRGVLAPADA*ELRPRARAPRQ Trigger: CTGGCGAGGAGCGCGAGCCCGCGGCCGCAGTTCCCAGGCGTCTGCGGGCGCGAGCACGCCGCGACCCTGCGT 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS GCA 72 bp | CTGCCATCCTTGCCCTGCCATGTCTCGCCGGAAGCCTaGGTCGGGCGGCCTCGCTGCCTCCAGCTCAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: LPSLPCHVSPEA*VGRPRCLQLSP Trigger: GGGGCTGAGCTGGAGGCAGCGAGGCCGCCCGACGCAGGCTTCCGGCGAGACATGGCAGGGCAAGGATGGCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS GCA 72 bp | TACGGGAAGCCTGAAATCCACCTCCTCCTCCACAGGTaGAGCCGACCAGGTGGACCCTGGCGCTGCAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: YGKPEIHLLLHR*SRPGGPWRCSG Trigger: GCCGCTGCAGCGCCAGGGTCCACCTGGTCGGCTGCACCTGTGGAGGAGGAGGTGGATTTCAGGCTTCCCGTA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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| CDS GCA 72 bp | TGCGTCGGGCGGCCTCGCTGCCTCCAGCTCAGCCCCTaGGAGGCAAGCGGTTTTGAGCCGATTCTTCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: CVGRPRCLQLSP*EASGFEPILPV Trigger: GACTGGAAGAATCGGCTCAAAACCGCTTGCCTCGCAGGGGCTGAGCTGGAGGCAGCGAGGCCGCCCGACGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439211.7 |
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