RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DHDDS (Homo sapiens)

Ensembl gene IDs: ENSG00000117682

Ensembl transcript IDs: ENST00000236342.12, ENST00000360009.6, ENST00000374185.7, ENST00000374186.7, ENST00000416052.1, ENST00000427245.6, ENST00000430232.5, ENST00000431933.5, ENST00000434391.6, ENST00000436153.6, ENST00000487944.5, ENST00000525165.5, ENST00000525326.5, ENST00000525410.1, ENST00000525546.5, ENST00000525682.6, ENST00000526219.5, ENST00000526278.5, ENST00000527611.1, ENST00000528557.5, ENST00000529688.5, ENST00000530781.5, ENST00000531312.5, ENST00000531955.5, ENST00000533087.5

Found 956 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCAGAGGGCAGGGCAAAGTGGCAGGTGGCCAGCCTCATTCAGGCTaGTGCAGTGCCCAGACGGGCCAGCCAGTCAGCTCGCTTGAGTTC +
Preference number: 1 (lower is better)
Translates to: GRGQGKVAGGQPHSG*CSAQTGQPVSSLEF
Trigger: GAACTCAAGCGAGCTGACTGGCTGGCCCGTCTGGGCACTGCATCAGCCTGAATGAGGCTGGCCACCTGCCACTTTGCCCTGCCCTCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR GCA 90 bp TGCAGGAAGCCTTGGACTCGCTCTTCCCGTCTGGCCGAGAGTTTGTaGAAGCGTGTCCTTCGGAGCTGGGCGTCCCCACTGGCTTGGAGC +
Preference number: 1 (lower is better)
Translates to: CRKPWTRSSRLAESL*KRVLRSWASPLAWS
Trigger: GCTCCAAGCCAGTGGGGACGCCCAGCTCCGAAGGACACGCTTGCACAAACTCTCGGCCAGACGGGAAGAGCGAGTCCAAGGCTTCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR GCA 90 bp GTGCCCAGACGGGCCAGCCAGTCAGCTCGCTTGAGTTCCAAGGCCTaGAGGAAGCCTTGGACTCGCTCTTCCCGTCTGGCCGAGAGTTTG +
Preference number: 1 (lower is better)
Translates to: VPRRASQSARLSSKA*RKPWTRSSRLAESL
Trigger: CAAACTCTCGGCCAGACGGGAAGAGCGAGTCCAAGGCTTCCTGCAGGCCTTGGAACTCAAGCGAGCTGACTGGCTGGCCCGTCTGGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR CCA 90 bp AGTTTGTGCAAGCGTGTCCTTCGGAGCTGGGCGTCCCCACTGGCTTaGAGCCCCTCTCGCAGCAGCTGCTCTGTCACTGTAGCCTGGTCC +
Preference number: 1 (lower is better)
Translates to: SLCKRVLRSWASPLA*SPSRSSCSVTVAWS
Trigger: GGACCAGGCTACAGTGACAGAGCAGCTGCTGCGAGAGGGGCTCCAAGCCAGTGGGGACGCCCAGCTCCGAAGGACACGCTTGCACAAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR CCA 90 bp CTGGCTTGGAGCCCCTCTCGCAGCAGCTGCTCTGTCACTGTAGCCTaGTCCCTCTCCAGCTGCTGCCTCTTCCGCTCCTCTGCATACATG +
Preference number: 1 (lower is better)
Translates to: LAWSPSRSSCSVTVA*SLSSCCLFRSSAYM
Trigger: CATGTATGCAGAGGAGCGGAAGAGGCAGCAGCTGGAGAGGGACCAGGCTACAGTGACAGAGCAGCTGCTGCGAGAGGGGCTCCAAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR CCA 90 bp GCCAGCCAGTCAGCTCGCTTGAGTTCCAAGGCCTGCAGGAAGCCTTaGACTCGCTCTTCCCGTCTGGCCGAGAGTTTGTGCAAGCGTGTC +
Preference number: 1 (lower is better)
Translates to: ASQSARLSSKACRKP*TRSSRLAESLCKRV
Trigger: GACACGCTTGCACAAACTCTCGGCCAGACGGGAAGAGCGAGTCCAAGGCTTCCTGCAGGCCTTGGAACTCAAGCGAGCTGACTGGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR TCA 90 bp GTGCTGGATTCAGTTCACCAGGGCCTACAGGCCCTTCTGTTACCCTaGACCATGGAGGGGGCCAGTCTCATTTGGGAGTGGAGCCTGGCC +
Preference number: 1 (lower is better)
Translates to: VLDSVHQGLQALLLP*TMEGASLIWEWSLA
Trigger: GGCCAGGCTCCACTCCCAAATGAGACTGGCCCCCTCCATGGTTCAGGGTAACAGAAGGGCCTGTAGGCCCTGGTGAACTGAATCCAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR GCA 90 bp CACCTGCTCTCCAGGAACCCTGTGCCAGGGATTGGTAGAGGGGAGTaGCAGGTGTGGATGGGGGCTTTGCCAAAGGGTTCACTGATTGGC +
Preference number: 1 (lower is better)
Translates to: HLLSRNPVPGIGRGE*QVWMGALPKGSLIG
Trigger: GCCAATCAGTGAACCCTTTGGCAAAGCCCCCATCCACACCTGGCACTCCCCTCTACCAATCCCTGGCACAGGGTTCCTGGAGAGCAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 90 bp ATTCAGTTCACCAGGGCCTACAGGCCCTTCTGTTACCCTGAACCATaGAGGGGGCCAGTCTCATTTGGGAGTGGAGCCTGGCCCCATGCC +
Preference number: 1 (lower is better)
Translates to: IQFTRAYRPFCYPEP*RGPVSFGSGAWPHA
Trigger: GGCATGGGGCCAGGCTCCACTCCCAAATGAGACTGGCCCCCTCCATGGTTCAGGGTAACAGAAGGGCCTGTAGGCCCTGGTGAACTGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR GCA 90 bp CAGGAGACAGGACTCAACAGCCACGCTCATAGGGCAGATTCCGTTTaGTGCCTCCAGCCCCTCATTCCCGCCTTAATTGTAGGGCTCTGC +
Preference number: 1 (lower is better)
Translates to: QETGLNSHAHRADSV*CLQPLIPALIVGLC
Trigger: GCAGAGCCCTACAATTAAGGCGGGAATGAGGGGCTGGAGGCAGCAAACGGAATCTGCCCTATGAGCGTGGCTGTTGAGTCCTGTCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR GCA 90 bp TACTATTTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTaGCTCTTCTTTCCACCACTACATCGCCTCCTGGGGCAGCTTCTC +
Preference number: 1 (lower is better)
Translates to: YYFAALAAGRRRRPL*LFFPPLHRLLGQLL
Trigger: GAGAAGCTGCCCCAGGAGGCGATGTAGTGGTGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 90 bp CTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTaGGGGGCTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAG +
Preference number: 1 (lower is better)
Translates to: LSQAAQRYLWPANLA*GAPQPSKGNTIHYQ
Trigger: CTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAGCCCCCCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
3UTR CCA 90 bp TCCAGGAACCCTGTGCCAGGGATTGGTAGAGGGGAGTGCCAGGTGTaGATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATC +
Preference number: 1 (lower is better)
Translates to: SRNPVPGIGRGECQV*MGALPKGSLIGFSI
Trigger: GATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATCCACACCTGGCACTCCCCTCTACCAATCCCTGGCACAGGGTTCCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR GCA 90 bp TTTATGCTTGATTCTGGGAGCATGGACAATAGCCAAGAAGTCTCTTaGCGCCAGGTATCCCGGGACAGAAAGGGGAAGAGGCGGGTGGGG +
Preference number: 1 (lower is better)
Translates to: FMLDSGSMDNSQEVS*RQVSRDRKGKRRVG
Trigger: CCCCACCCGCCTCTTCCCCTTTCTGTCCCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATTGTCCATGCTCCCAGAATCAAGCATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR GCA 90 bp GAGACAGGACTCAACAGCCACGCTCATAGGGCAGATTCCGTTTGCTaGCTCCAGCCCCTCATTCCCGCCTTAATTGTAGGGCTCTGCATT +
Preference number: 1 (lower is better)
Translates to: ETGLNSHAHRADSVC*LQPLIPALIVGLCI
Trigger: AATGCAGAGCCCTACAATTAAGGCGGGAATGAGGGGCTGGAGGCAGCAAACGGAATCTGCCCTATGAGCGTGGCTGTTGAGTCCTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR GCA 90 bp CACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGCAGCCCTTaGTGCTGGGCGACGACGACGACCTCTCTGCCTCTTCTTTCCACC +
Preference number: 1 (lower is better)
Translates to: HTCPKQPRVLLFCSP*CWATTTTSLPLLST
Trigger: GGTGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 90 bp AGAGGAGGAGAAAAGCTTGTGTGGGCTGAGTCGACAATAGGTAATTaGATTGTAATCGCCCGCCTGGCTTCCGCGCACCATTGGGGGTGC +
Preference number: 1 (lower is better)
Translates to: RGGEKLVWAESTIGN*IVIARLASAHHWGC
Trigger: GCACCCCCAATGGTGCGCGGAAGCCAGGCGGGCGATTACAATCCAATTACCTATTGTCGACTCAGCCCACACAAGCTTTTCTCCTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 90 bp TGGAGCCTGGCCCCATGCCCTGCAAGAGGAGGAGAAAAGCTTGTGTaGGCTGAGTCGACAATAGGTAATTGGATTGTAATCGCCCGCCTG +
Preference number: 1 (lower is better)
Translates to: WSLAPCPARGGEKLV*AESTIGNWIVIARL
Trigger: CAGGCGGGCGATTACAATCCAATTACCTATTGTCGACTCAGCCCACACAAGCTTTTCTCCTCCTCTTGCAGGGCATGGGGCCAGGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 90 bp TCTCTTGCCGCCAGGTATCCCGGGACAGAAAGGGGAAGAGGCGGGTaGGGTATAGGAAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAA +
Preference number: 1 (lower is better)
Translates to: SLAARYPGTERGRGG*GIGKLGVSCVLLLQ
Trigger: TTGTAGCAAGAGCACACAGGAAACCCCTAACTTTCCTATACCCCACCCGCCTCTTCCCCTTTCTGTCCCGGGATACCTGGCGGCAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR GCA 90 bp AGTGTTTGGTTCTGCTCAGTCCTGTTGTGTTACAGGGGAGGCCTGTaGTGGATTCAGTTCACCAGGGCCTACAGGCCCTTCTGTTACCCT +
Preference number: 1 (lower is better)
Translates to: SVWFCSVLLCYRGGL*WIQFTRAYRPFCYP
Trigger: AGGGTAACAGAAGGGCCTGTAGGCCCTGGTGAACTGAATCCAGCACAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAACCAAACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR GCA 90 bp ACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGCAGCCCTTGCTaGTGGGCGACGACGACGACCTCTCTGCCTCTTCTTTCCACCACT +
Preference number: 1 (lower is better)
Translates to: TCPKQPRVLLFCSPC*WATTTTSLPLLSTT
Trigger: AGTGGTGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 90 bp GTTTGGTTCTGCTCAGTCCTGTTGTGTTACAGGGGAGGCCTGTGCTaGATTCAGTTCACCAGGGCCTACAGGCCCTTCTGTTACCCTGAA +
Preference number: 1 (lower is better)
Translates to: VWFCSVLLCYRGGLC*IQFTRAYRPFCYPE
Trigger: TTCAGGGTAACAGAAGGGCCTGTAGGCCCTGGTGAACTGAATCCAGCACAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAACCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 90 bp CTGGAACTGCAGGATGGCCTCGAAGAGGTTCCAAAATGTATACTCTaGCCACAGAACGGGTTGGAACACCAGGCAGGAGTGAGAGGTCTG +
Preference number: 1 (lower is better)
Translates to: LELQDGLEEVPKCIL*PQNGLEHQAGVRGL
Trigger: CAGACCTCTCACTCCTGCCTGGTGTTCCAACCCGTTCTGTGGCCAGAGTATACATTTTGGAACCTCTTCGAGGCCATCCTGCAGTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR TCA 90 bp GAGGGGAGTGCCAGGTGTGGATGGGGGCTTTGCCAAAGGGTTCACTaGTTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCT +
Preference number: 1 (lower is better)
Translates to: EGSARCGWGLCQRVH*LASQSPCLAFMLDS
Trigger: AGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATCCACACCTGGCACTCCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR GCA 90 bp TGCACAAATCACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTaGAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGCCTCTT +
Preference number: 1 (lower is better)
Translates to: CTNHTCPKQPRVLLF*SPCCWATTTTSLPL
Trigger: AAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTGATTTGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR GCA 90 bp TGCTTCTGCAGTTTCTCCTTTTCTTCCATCAAGCGGCTGAACTTCTaGCGGGCCAGATCCATAAGCCCGTCTACCTCACTCTTGGAGCGT +
Preference number: 1 (lower is better)
Translates to: CFCSFSFSSIKRLNF*RARSISPSTSLLER
Trigger: ACGCTCCAAGAGTGAGGTAGACGGGCTTATGGATCTGGCCCGGCAGAAGTTCAGCCGCTTGATGGAAGAAAAGGAGAAACTGCAGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR CCA 90 bp GGAGTGCCAGGTGTGGATGGGGGCTTTGCCAAAGGGTTCACTGATTaGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGGGA +
Preference number: 1 (lower is better)
Translates to: GVPGVDGGFAKGFTD*LLNRRVWHLCLILG
Trigger: TCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATCCACACCTGGCACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 90 bp TGTCCAAAGCAACCACGAGTTCTACTATTTTGCAGCCCTTGCTGCTaGGCGACGACGACGACCTCTCTGCCTCTTCTTTCCACCACTACA +
Preference number: 1 (lower is better)
Translates to: CPKQPRVLLFCSPCC*ATTTTSLPLLSTTT
Trigger: TGTAGTGGTGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCGTGGTTGCTTTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 90 bp CTCGGGCCTTCTGAAGCACGCTATGGTTCATCTGGAACTGCAGGATaGCCTCGAAGAGGTTCCAAAATGTATACTCTGGCCACAGAACGG +
Preference number: 1 (lower is better)
Translates to: LGPSEARYGSSGTAG*PRRGSKMYTLATER
Trigger: CCGTTCTGTGGCCAGAGTATACATTTTGGAACCTCTTCGAGGCCATCCTGCAGTTCCAGATGAACCATAGCGTGCTTCAGAAGGCCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR TCA 90 bp AGGCAGCTGATGAGTTGTGGCCCTTTGCTCTCCAAACCCTATTGGTaGCCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACCCTC +
Preference number: 1 (lower is better)
Translates to: RQLMSCGPLLSKPYW*PDLGLVYSWETFTL
Trigger: GAGGGTGAAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAGAGCAAAGGGCCACAACTCATCAGCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 90 bp CTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGGGAGCATaGACAATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGGACA +
Preference number: 1 (lower is better)
Translates to: LLNRRVWHLCLILGA*TIAKKSLAARYPGT
Trigger: TGTCCCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR GCA 90 bp GACTTTAAAGAGAGTAGCATTTGGTTGGTGTTGCTGGCTGGTACTTaGCGGTGTGGGGCACCTGAAATAGAGTTGCTCAGGCAGACAGCT +
Preference number: 1 (lower is better)
Translates to: DFKESSIWLVLLAGT*RCGAPEIELLRQTA
Trigger: AGCTGTCTGCCTGAGCAACTCTATTTCAGGTGCCCCACACCGGCAAGTACCAGCCAGCAACACCAACCAAATGCTACTCTCTTTAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 90 bp GGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTaGCATTTATGCTTGATTCTGGGAGCATGGACAATAGCCAAGAAG +
Preference number: 1 (lower is better)
Translates to: GFAKGFTDWLLNRRV*HLCLILGAWTIAKK
Trigger: CTTCTTGGCTATTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CAA 90 bp GCCTGCAGGAAGCCTTGGACTCGCTCTTCCCGTCTGGCCGAGAGTTaGTGCAAGCGTGTCCTTCGGAGCTGGGCGTCCCCACTGGCTTGG +
Preference number: 2 (lower is better)
Translates to: ACRKPWTRSSRLAES*CKRVLRSWASPLAW
Trigger: CCAAGCCAGTGGGGACGCCCAGCTCCGAAGGACACGCTTGCACAAACTCTCGGCCAGACGGGAAGAGCGAGTCCAAGGCTTCCTGCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR CAA 90 bp GAGTTTGTGCAAGCGTGTCCTTCGGAGCTGGGCGTCCCCACTGGCTaGGAGCCCCTCTCGCAGCAGCTGCTCTGTCACTGTAGCCTGGTC +
Preference number: 2 (lower is better)
Translates to: EFVQACPSELGVPTG*EPLSQQLLCHCSLV
Trigger: GACCAGGCTACAGTGACAGAGCAGCTGCTGCGAGAGGGGCTCCAAGCCAGTGGGGACGCCCAGCTCCGAAGGACACGCTTGCACAAACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR CCA 90 bp TTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGCCTCTTCTTTCCACCAGCAAACCTGGCCTaGGGGGCTCCCCAGCCAAGC +
Preference number: 2 (lower is better)
Translates to: FAALAAGRRRRPLCLFFPPANLA*GAPQPS
Trigger: GCTTGGCTGGGGAGCCCCCCAGGCCAGGTTTGCTGG...TGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp AATCGCCCGCCTGGCTTCCGCGCACCATTGGGGGTGCTGAGTCTTTCAGTGAGCTGGAGCCTGGCCCCATaGCCTGCAAGAGGAGGAGAA +
Preference number: 2 (lower is better)
Translates to: NRPPGFRAPLGVLSLSVSWSLAP*PARGGE
Trigger: TTCTCCTCCTCTTGCAGGGCATGGGGCCAGGCTCCA...GCTCACTGAAAGACTCAGCACCCCCAATGGTGCGCGGAAGCCAGGCGGGCGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp AATCGCCCGCCTGGCTTCCGCGCACCATTGGGGGTGCTGAGTCTTTCAGTGAGCGAAAAGGAAGGGGAGTaGAGCCCTGGAGGCAGAGGG +
Preference number: 2 (lower is better)
Translates to: NRPPGFRAPLGVLSLSVSEKEGE*SPGGRG
Trigger: CCCTCTGCCTCCAGGGCTCCACTCCCCTTCCTTTTC...GCTCACTGAAAGACTCAGCACCCCCAATGGTGCGCGGAAGCCAGGCGGGCGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp GTTCCAAGGCCTGCAGGAAGCCTTGGACTCGCTCTTCCCGTCTGGCCGAGAGTTGAAAAGGAAGGGGAGTaGAGCCCTGGAGGCAGAGGG +
Preference number: 2 (lower is better)
Translates to: VPRPAGSLGLALPVWPRVEKEGE*SPGGRG
Trigger: CCCTCTGCCTCCAGGGCTCCACTCCCCTTCCTTTTC...AACTCTCGGCCAGACGGGAAGAGCGAGTCCAAGGCTTCCTGCAGGCCTTGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR CCA 90 bp ACCTGCTCTCCAGGAACCCTGTGCCAGGGATTGGTAGAGGGGAGTGCCAGGTGTAGGGGAGGCCTGTGCTaGATTCAGTTCACCAGGGCC +
Preference number: 2 (lower is better)
Translates to: TCSPGTLCQGLVEGSARCRGGLC*IQFTRA
Trigger: GGCCCTGGTGAACTGAATCCAGCACAGGCCTCCCCT...ACACCTGGCACTCCCCTCTACCAATCCCTGGCACAGGGTTCCTGGAGAGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp TTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGCCTCTTCTTTCCATCCCTCTCCAGCTGCTaGCTCTTCCGCTCCTCTGCA +
Preference number: 2 (lower is better)
Translates to: FAALAAGRRRRPLCLFFPSLSSC*LFRSSA
Trigger: TGCAGAGGAGCGGAAGAGGCAGCAGCTGGAGAGGGA...TGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR CCA 90 bp TTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGCCTCTTCTTTCCAGTTGGTGTTGCTGGCTaGTACTTGCCGGTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: FAALAAGRRRRPLCLFFPVGVAG*YLPVWG
Trigger: GCCCCACACCGGCAAGTACCAGCCAGCAACACCAAC...TGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CAA 90 bp ACAGGCCCTTCTGTTACCCTGAACCATGGAGGGGGCCAGTCTCATTaGGGAGTGGAGCCTGGCCCCATGCCCTGCAAGAGGAGGAGAAAA +
Preference number: 2 (lower is better)
Translates to: TGPSVTLNHGGGQSH*GVEPGPMPCKRRRK
Trigger: TTTTCTCCTCCTCTTGCAGGGCATGGGGCCAGGCTCCACTCCCAAATGAGACTGGCCCCCTCCATGGTTCAGGGTAACAGAAGGGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CAA 90 bp GTGCCAGGGATTGGTAGAGGGGAGTGCCAGGTGTGGATGGGGGCTTaGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGC +
Preference number: 2 (lower is better)
Translates to: VPGIGRGECQVWMGA*PKGSLIGFSIAVSG
Trigger: GCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATCCACACCTGGCACTCCCCTCTACCAATCCCTGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp CCAGGGCCTACAGGCCCTTCTGTTACCCTGAACCATGGAGGGGGCCAGTCTCATTACAGGGGAGGCCTGTaGTGGATTCAGTTCACCAGG +
Preference number: 2 (lower is better)
Translates to: PGPTGPSVTLNHGGGQSHYRGGL*WIQFTR
Trigger: CCTGGTGAACTGAATCCAGCACAGGCCTCCCCTGTA...ATGAGACTGGCCCCCTCCATGGTTCAGGGTAACAGAAGGGCCTGTAGGCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp ACCTCTCTGCCTCTTCTTTCCACCACTACATCGCCTCCTGGGGCAGCTTCTCCCTCCTCTCAGCAGCTCTaGAGCAAGTCCTGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: TSLPLLSTTTSPPGAASPSSQQL*SKSWQR
Trigger: CCTCTGCCAGGACTTGCTGCAGAGCTGCTGAGAGGA...GGGAGAAGCTGCCCCAGGAGGCGATGTAGTGGTGGAAAGAAGAGGCAGAGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp TTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGCCTCTTCTTTCCAATTGGTAGAGGGGAGTaGCAGGTGTGGATGGGGGCT +
Preference number: 2 (lower is better)
Translates to: FAALAAGRRRRPLCLFFPIGRGE*QVWMGA
Trigger: AGCCCCCATCCACACCTGGCACTCCCCTCTACCAAT...TGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp CCAGGGCCTACAGGCCCTTCTGTTACCCTGAACCATGGAGGGGGCCAGTCTCATGCCCAAAGGTATCTATaGCCAGCAAACCTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: PGPTGPSVTLNHGGGQSHAQRYL*PANLAW
Trigger: CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGC...ATGAGACTGGCCCCCTCCATGGTTCAGGGTAACAGAAGGGCCTGTAGGCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp GATTCTGGGAGCATGGACAATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGTGCAGCCCTTGCTGCTaGGCGACGACGACGACCTCT +
Preference number: 2 (lower is better)
Translates to: DSGSMDNSQEVSCRQVSRCSPCC*ATTTTS
Trigger: AGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCA...CCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATTGTCCATGCTCCCAGAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp ATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCTGGAGCCTGGCCCCATaGCCTGCAAGAGGAGGAGAA +
Preference number: 2 (lower is better)
Translates to: MGALPKGSLIGFSIAVSGWSLAP*PARGGE
Trigger: TTCTCCTCCTCTTGCAGGGCATGGGGCCAGGCTCCA...GCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp ACCTCTCTGCCTCTTCTTTCCACCACTACATCGCCTCCTGGGGCAGCTTCTCCCTACAGGGGAGGCCTGTaGTGGATTCAGTTCACCAGG +
Preference number: 2 (lower is better)
Translates to: TSLPLLSTTTSPPGAASPYRGGL*WIQFTR
Trigger: CCTGGTGAACTGAATCCAGCACAGGCCTCCCCTGTA...GGGAGAAGCTGCCCCAGGAGGCGATGTAGTGGTGGAAAGAAGAGGCAGAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp CCTCCAGCCCCTCATTCCCGCCTTAATTGTAGGGCTCTGCATTATAGCCGCATAGGGGCCAGTCTCATTTaGGAGTGGAGCCTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: PPAPHSRLNCRALHYSRIGASLI*EWSLAP
Trigger: TGGGGCCAGGCTCCACTCCCAAATGAGACTGGCCCC...TATGCGGCTATAATGCAGAGCCCTACAATTAAGGCGGGAATGAGGGGCTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp GGTGTGGATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGGGGAGTGCCAGGTGTaGATGGGGGCTTTGCCAAAG +
Preference number: 2 (lower is better)
Translates to: GVDGGFAKGFTDWLLNRRGECQV*MGALPK
Trigger: CTTTGGCAAAGCCCCCATCCACACCTGGCACTCCCC...ACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATCCACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp ATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCGGGCAAAGTGGCAGGTaGCCAGCCTCATTCAGGCTG +
Preference number: 2 (lower is better)
Translates to: MGALPKGSLIGFSIAVSGGQSGR*PASFRL
Trigger: CAGCCTGAATGAGGCTGGCCACCTGCCACTTTGCCC...GCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR TCA 90 bp AATCGCCCGCCTGGCTTCCGCGCACCATTGGGGGTGCTGAGTCTTTCAGTGAGCTCCAAACCCTATTGGTaGCCAGACCTAGGTTTAGTG +
Preference number: 2 (lower is better)
Translates to: NRPPGFRAPLGVLSLSVSSKPYW*PDLGLV
Trigger: CACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGA...GCTCACTGAAAGACTCAGCACCCCCAATGGTGCGCGGAAGCCAGGCGGGCGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp GATTCTGGGAGCATGGACAATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGAGCCAAGAAGTCTCTTaGCGCCAGGTATCCCGGGAC +
Preference number: 2 (lower is better)
Translates to: DSGSMDNSQEVSCRQVSRSQEVS*RQVSRD
Trigger: GTCCCGGGATACCTGGCGGCAAGAGACTTCTTGGCT...CCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATTGTCCATGCTCCCAGAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp GATTCTGGGAGCATGGACAATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGATTGGTAGAGGGGAGTaGCAGGTGTGGATGGGGGCT +
Preference number: 2 (lower is better)
Translates to: DSGSMDNSQEVSCRQVSRIGRGE*QVWMGA
Trigger: AGCCCCCATCCACACCTGGCACTCCCCTCTACCAAT...CCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATTGTCCATGCTCCCAGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp GGTGTGGATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTCTATTTTGCAGCCCTTaGTGCTGGGCGACGACGACG +
Preference number: 2 (lower is better)
Translates to: GVDGGFAKGFTDWLLNRRLFCSP*CWATTT
Trigger: CGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAG...ACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATCCACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp AATCGCCCGCCTGGCTTCCGCGCACCATTGGGGGTGCTGAGTCTTTCAGTGAGCGGTGGAAGGCTAAAATaGAAGGGTAAAGAGCTAGGG +
Preference number: 2 (lower is better)
Translates to: NRPPGFRAPLGVLSLSVSGGRLK*KGKELG
Trigger: CCCTAGCTCTTTACCCTTCCATTTTAGCCTTCCACC...GCTCACTGAAAGACTCAGCACCCCCAATGGTGCGCGGAAGCCAGGCGGGCGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp CCAGGGCCTACAGGCCCTTCTGTTACCCTGAACCATGGAGGGGGCCAGTCTCATTGTGCAATCAGCTCCTaGAGATCCAAGGGCAACAAG +
Preference number: 2 (lower is better)
Translates to: PGPTGPSVTLNHGGGQSHCAISS*RSKGNK
Trigger: CTTGTTGCCCTTGGATCTCCAGGAGCTGATTGCACA...ATGAGACTGGCCCCCTCCATGGTTCAGGGTAACAGAAGGGCCTGTAGGCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR TCA 90 bp GGTGTGGATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTGGGAATCAGAGTTTaGGATGGTGAGGGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: GVDGGFAKGFTDWLLNRRVGIRV*DGEGRE
Trigger: CTCCCTGCCCTCACCATCTCAAACTCTGATTCCCAC...ACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATCCACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR TCA 90 bp TTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGCCTCTTCTTTCCAGCCAGGTCAAAAAGCTaGGAGAAACCTCGAAGAGTG +
Preference number: 2 (lower is better)
Translates to: FAALAAGRRRRPLCLFFPARSKS*EKPRRV
Trigger: CACTCTTCGAGGTTTCTCTCAGCTTTTTGACCTGGC...TGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR TCA 90 bp CGAGTTCTACTATTTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGTGCCAAAGGGTTCACTaGTTGGCTTCTCAATCGCCG +
Preference number: 2 (lower is better)
Translates to: RVLLFCSPCCWATTTTSLCQRVH*LASQSP
Trigger: CGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCA...CAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR TCA 90 bp AATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGGACAGAAAGGGGAAGAGGAACACCAGGCAGGAGTaGGAGGTCTGCCATAGCAAG +
Preference number: 2 (lower is better)
Translates to: NSQEVSCRQVSRDRKGKRNTRQE*EVCHSK
Trigger: CTTGCTATGGCAGACCTCTCACTCCTGCCTGGTGTT...CCTCTTCCCCTTTCTGTCCCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR GCA 90 bp AATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGGACAGAAAGGGGAAGAGGTACAGGGGAGGCCTGTaGTGGATTCAGTTCACCAGG +
Preference number: 2 (lower is better)
Translates to: NSQEVSCRQVSRDRKGKRYRGGL*WIQFTR
Trigger: CCTGGTGAACTGAATCCAGCACAGGCCTCCCCTGTA...CCTCTTCCCCTTTCTGTCCCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp ATGTCCTCAAATGGGGGCTTGGCTCACAGGTGGAAGGACACTAAATTGGTCCCATTTTGCAGCCCTTGCTaGTGGGCGACGACGACGACC +
Preference number: 2 (lower is better)
Translates to: MSSNGGLAHRWKDTKLVPFCSPC*WATTTT
Trigger: GGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAA...TGGGACCAATTTAGTGTCCTTCCACCTGTGAGCCAAGCCCCCATTTGAGGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp ACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCAGGCAGCCCGGATACACACCCCATaGTTCTGCAGTTTCTCCTTT +
Preference number: 2 (lower is better)
Translates to: TRGRLSPSILLRSLSQAARIHTP*FCSFSF
Trigger: AAAGGAGAAACTGCAGAAGCATGGGGTGTGTATCCG...GGCTGCCTGGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR GCA 90 bp GAAGAAGTGTTTGGTTCTGCTCAGTCCTGTTGTGTTACAGGGGAGGCCTGTGCTCCCTCTCGCAGCAGCTaGTCTGTCACTGTAGCCTGG +
Preference number: 2 (lower is better)
Translates to: EEVFGSAQSCCVTGEACAPSRSS*SVTVAW
Trigger: CCAGGCTACAGTGACAGAGCAGCTGCTGCGAGAGGG...AGCACAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAACCAAACACTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR CCA 90 bp TGTATACTCTGGCCACAGAACGGGTTGGAACACCAGGCAGGAGTGAGAGGTCTGGCCCAAAGGTATCTATaGCCAGCAAACCTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: CILWPQNGLEHQAGVRGLAQRYL*PANLAW
Trigger: CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGC...CAGACCTCTCACTCCTGCCTGGTGTTCCAACCCGTTCTGTGGCCAGAGTATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR CCA 90 bp ACCTGCTCTCCAGGAACCCTGTGCCAGGGATTGGTAGAGGGGAGTGCCAGGTGTGAGCCAAATCTTTTGTaGAAGCTGGGTGGAAGGCTA +
Preference number: 2 (lower is better)
Translates to: TCSPGTLCQGLVEGSARCEPNLL*KLGGRL
Trigger: TAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTC...ACACCTGGCACTCCCCTCTACCAATCCCTGGCACAGGGTTCCTGGAGAGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp AATCGCCCGCCTGGCTTCCGCGCACCATTGGGGGTGCTGAGTCTTTCAGTGAGCTCGACAATAGGTAATTaGATTGTAATCGCCCGCCTG +
Preference number: 2 (lower is better)
Translates to: NRPPGFRAPLGVLSLSVSSTIGN*IVIARL
Trigger: CAGGCGGGCGATTACAATCCAATTACCTATTGTCGA...GCTCACTGAAAGACTCAGCACCCCCAATGGTGCGCGGAAGCCAGGCGGGCGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp AATCGCCCGCCTGGCTTCCGCGCACCATTGGGGGTGCTGAGTCTTTCAGTGAGCAGAGTAGCATTTGGTTaGTGTTGCTGGCTGGTACTT +
Preference number: 2 (lower is better)
Translates to: NRPPGFRAPLGVLSLSVSRVAFG*CCWLVL
Trigger: AAGTACCAGCCAGCAACACCAACCAAATGCTACTCT...GCTCACTGAAAGACTCAGCACCCCCAATGGTGCGCGGAAGCCAGGCGGGCGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp GATTCTGGGAGCATGGACAATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGCCTCAAATGGGGGCTTaGCTCACAGGTGGAAGGACA +
Preference number: 2 (lower is better)
Translates to: DSGSMDNSQEVSCRQVSRPQMGA*LTGGRT
Trigger: TGTCCTTCCACCTGTGAGCCAAGCCCCCATTTGAGG...CCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATTGTCCATGCTCCCAGAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp CCAGGGCCTACAGGCCCTTCTGTTACCCTGAACCATGGAGGGGGCCAGTCTCATACTCAGAGATATCACTaGGATCCAACAGGCCTTGCT +
Preference number: 2 (lower is better)
Translates to: PGPTGPSVTLNHGGGQSHTQRYH*DPTGLA
Trigger: AGCAAGGCCTGTTGGATCCCAGTGATATCTCTGAGT...ATGAGACTGGCCCCCTCCATGGTTCAGGGTAACAGAAGGGCCTGTAGGCCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR CAA 90 bp GGAGCAGAGTCAGTTGGAAGAAGTGTTTGGTTCTGCTCAGTCCTGTaGTGTTACAGGGGAGGCCTGTGCTGGATTCAGTTCACCAGGGCC +
Preference number: 2 (lower is better)
Translates to: GAESVGRSVWFCSVL*CYRGGLCWIQFTRA
Trigger: GGCCCTGGTGAACTGAATCCAGCACAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAACCAAACACTTCTTCCAACTGACTCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CAA 90 bp TCACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGCAGCCCTaGCTGCTGGGCGACGACGACGACCTCTCTGCCTCTTCTTTCCAC +
Preference number: 2 (lower is better)
Translates to: SHLSKATTSSTILQP*LLGDDDDLSASSFH
Trigger: GTGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR TCA 90 bp TTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGCCTCTTCTTTCCATCCAAACCCTATTGGTaGCCAGACCTAGGTTTAGTG +
Preference number: 2 (lower is better)
Translates to: FAALAAGRRRRPLCLFFPSKPYW*PDLGLV
Trigger: CACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGA...TGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR TCA 90 bp GTTCCAAGGCCTGCAGGAAGCCTTGGACTCGCTCTTCCCGTCTGGCCGAGAGTTGCATTGCTGATCTCATaGCGGGATGTGTATGCAAAA +
Preference number: 2 (lower is better)
Translates to: VPRPAGSLGLALPVWPRVALLIS*RDVYAK
Trigger: TTTTGCATACACATCCCGTCATGAGATCAGCAATGC...AACTCTCGGCCAGACGGGAAGAGCGAGTCCAAGGCTTCCTGCAGGCCTTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR GCA 90 bp TACCCCAATCATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACTGGAGCCTGGCCCCATaGCCTGCAAGAGGAGGAGAA +
Preference number: 2 (lower is better)
Translates to: YPNHITESQTQETGLNSHWSLAP*PARGGE
Trigger: TTCTCCTCCTCTTGCAGGGCATGGGGCCAGGCTCCA...GTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATATGATTGGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp AGGGAGCCAGGTCAAAAAGCTGAGAGAAACCTCGAAGAGTGGAGTGGGAATCAGTTGCTGGCTGGTACTTaGCGGTGTGGGGCACCTGAA +
Preference number: 2 (lower is better)
Translates to: REPGQKAERNLEEWSGNQLLAGT*RCGAPE
Trigger: TTCAGGTGCCCCACACCGGCAAGTACCAGCCAGCAA...CTGATTCCCACTCCACTCTTCGAGGTTTCTCTCAGCTTTTTGACCTGGCTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp ATGTCCTCAAATGGGGGCTTGGCTCACAGGTGGAAGGACACTAAATTGGTCCCAAGCCAAGAAGTCTCTTaGCGCCAGGTATCCCGGGAC +
Preference number: 2 (lower is better)
Translates to: MSSNGGLAHRWKDTKLVPSQEVS*RQVSRD
Trigger: GTCCCGGGATACCTGGCGGCAAGAGACTTCTTGGCT...TGGGACCAATTTAGTGTCCTTCCACCTGTGAGCCAAGCCCCCATTTGAGGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp ATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCCGACGACGACCTCTCTaGCTCTTCTTTCCACCACTA +
Preference number: 2 (lower is better)
Translates to: MGALPKGSLIGFSIAVSGRRRPL*LFFPPL
Trigger: TAGTGGTGGAAAGAAGAGGCAGAGAGGTCGTCGTCG...GCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp CTCAGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCCTATTTTGCAGCCCTTaGTGCTGGGCGACGACGACG +
Preference number: 2 (lower is better)
Translates to: LRPKRDASPINHLYCTPILFCSP*CWATTT
Trigger: CGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAG...GATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp CTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTTGAAAAGGAAGGGGAGTaGAGCCCTGGAGGCAGAGGG +
Preference number: 2 (lower is better)
Translates to: LPSQAKGTPFIIRKGGAFEKEGE*SPGGRG
Trigger: CCCTCTGCCTCCAGGGCTCCACTCCCCTTCCTTTTC...AAAGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
3UTR-3UTR CCA 90 bp CCAGGGCCTACAGGCCCTTCTGTTACCCTGAACCATGGAGGGGGCCAGTCTCATAAAGAGCTAGGGTTTTaGGGAGAACTCTTCCCTGAA +
Preference number: 2 (lower is better)
Translates to: PGPTGPSVTLNHGGGQSHKELGF*GELFPE
Trigger: TTCAGGGAAGAGTTCTCCCCAAAACCCTAGCTCTTT...ATGAGACTGGCCCCCTCCATGGTTCAGGGTAACAGAAGGGCCTGTAGGCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp TTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGCCTCTTCTTTCCAGGAGAAAAGCTTGTGTaGGCTGAGTCGACAATAGGT +
Preference number: 2 (lower is better)
Translates to: FAALAAGRRRRPLCLFFPGEKLV*AESTIG
Trigger: ACCTATTGTCGACTCAGCCCACACAAGCTTTTCTCC...TGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp ACCTGCTCTCCAGGAACCCTGTGCCAGGGATTGGTAGAGGGGAGTGCCAGGTGTAGAAACCTCGAAGAGTaGAGTGGGAATCAGAGTTTG +
Preference number: 2 (lower is better)
Translates to: TCSPGTLCQGLVEGSARCRNLEE*SGNQSL
Trigger: CAAACTCTGATTCCCACTCCACTCTTCGAGGTTTCT...ACACCTGGCACTCCCCTCTACCAATCCCTGGCACAGGGTTCCTGGAGAGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp ACCTGCTCTCCAGGAACCCTGTGCCAGGGATTGGTAGAGGGGAGTGCCAGGTGTTTGCAGAAAGTAAAATaGGAAGTCTGGCATGGTGGC +
Preference number: 2 (lower is better)
Translates to: TCSPGTLCQGLVEGSARCLQKVK*EVWHGG
Trigger: GCCACCATGCCAGACTTCCCATTTTACTTTCTGCAA...ACACCTGGCACTCCCCTCTACCAATCCCTGGCACAGGGTTCCTGGAGAGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp CCTCCAGCCCCTCATTCCCGCCTTAATTGTAGGGCTCTGCATTATAGCCGCATAAGGGGAAGAGGCGGGTaGGGTATAGGAAAGTTAGGG +
Preference number: 2 (lower is better)
Translates to: PPAPHSRLNCRALHYSRIRGRGG*GIGKLG
Trigger: CCCTAACTTTCCTATACCCCACCCGCCTCTTCCCCT...TATGCGGCTATAATGCAGAGCCCTACAATTAAGGCGGGAATGAGGGGCTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp ATGTCCTCAAATGGGGGCTTGGCTCACAGGTGGAAGGACACTAAATTGGTCCCACACTACATCGCCTCCTaGGGCAGCTTCTCCCTACTC +
Preference number: 2 (lower is better)
Translates to: MSSNGGLAHRWKDTKLVPHYIAS*GSFSLL
Trigger: GAGTAGGGAGAAGCTGCCCCAGGAGGCGATGTAGTG...TGGGACCAATTTAGTGTCCTTCCACCTGTGAGCCAAGCCCCCATTTGAGGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp AAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTGCGTCCCCACTGGCTTaGAGCCCCTCTCGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: KGFTDWLLNRRVWHLCLIASPLA*SPSRSS
Trigger: GCTGCTGCGAGAGGGGCTCCAAGCCAGTGGGGACGC...AATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR CCA 90 bp AGGAAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTGCTGGGCGTCCCCACTaGCTTGGAGCCCCTCTCGCA +
Preference number: 2 (lower is better)
Translates to: RKVRGFLCALATTCKISPAGRPH*LGAPLA
Trigger: TGCGAGAGGGGCTCCAAGCCAGTGGGGACGCCCAGC...AGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR TCA 90 bp GCTTTGACCCTCACAAGCAGAGGACCTAGAACAAGCTTTGCCATGCCAAGAATAGCCCTTCTGTTACCCTaGACCATGGAGGGGGCCAGT +
Preference number: 2 (lower is better)
Translates to: ALTLTSRGPRTSFAMPRIALLLP*TMEGAS
Trigger: ACTGGCCCCCTCCATGGTTCAGGGTAACAGAAGGGC...TATTCTTGGCATGGCAAAGCTTGTTCTAGGTCCTCTGCTTGTGAGGGTCAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR TCA 90 bp TTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGCCTCTTCTTTCCATCTGGCATTTATGCTTaGTTCTGGGAGCATGGACAA +
Preference number: 2 (lower is better)
Translates to: FAALAAGRRRRPLCLFFPSGIYA*FWEHGQ
Trigger: TTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGA...TGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR TCA 90 bp CCTCCAGCCCCTCATTCCCGCCTTAATTGTAGGGCTCTGCATTATAGCCGCATATGCCAAAGGGTTCACTaGTTGGCTTCTCAATCGCCG +
Preference number: 2 (lower is better)
Translates to: PPAPHSRLNCRALHYSRICQRVH*LASQSP
Trigger: CGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCA...TATGCGGCTATAATGCAGAGCCCTACAATTAAGGCGGGAATGAGGGGCTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp ATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCAAAATGTACAGCACCTaGTCTCCAGGAACCCTGTGC +
Preference number: 2 (lower is better)
Translates to: MGALPKGSLIGFSIAVSGKMYST*SPGTLC
Trigger: GCACAGGGTTCCTGGAGAGCAGGTGCTGTACATTTT...GCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp ATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGCTCATAGGGCACGACGACGACCTCTCTaGCTCTTCTTTCCACCACTA +
Preference number: 2 (lower is better)
Translates to: ITESQTQETGLNSHAHRARRRPL*LFFPPL
Trigger: TAGTGGTGGAAAGAAGAGGCAGAGAGGTCGTCGTCG...TGCCCTATGAGCGTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp CTCAGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCGCCCAAAGGTATCTATaGCCAGCAAACCTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: LRPKRDASPINHLYCTPIAQRYL*PANLAW
Trigger: CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGC...GATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp TTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGCCTCTTCTTTCCAGGTTTAGTGTACTCGTaGGAGACTTTCACCCTCAAT +
Preference number: 2 (lower is better)
Translates to: FAALAAGRRRRPLCLFFPGLVYS*ETFTLN
Trigger: ATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACC...TGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp TTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGCCTCTTCTTTCCAAGAGTAGCATTTGGTTaGTGTTGCTGGCTGGTACTT +
Preference number: 2 (lower is better)
Translates to: FAALAAGRRRRPLCLFFPRVAFG*CCWLVL
Trigger: AAGTACCAGCCAGCAACACCAACCAAATGCTACTCT...TGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp AGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCATAGGGGAGTGCCAGGTGTaGATGGGGGCTTTGCCAAAG +
Preference number: 2 (lower is better)
Translates to: RPKRDASPINHLYCTPIIGECQV*MGALPK
Trigger: CTTTGGCAAAGCCCCCATCCACACCTGGCACTCCCC...TATGATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp CTCAGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCCCTCAAATGGGGGCTTaGCTCACAGGTGGAAGGACA +
Preference number: 2 (lower is better)
Translates to: LRPKRDASPINHLYCTPIPQMGA*LTGGRT
Trigger: TGTCCTTCCACCTGTGAGCCAAGCCCCCATTTGAGG...GATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp AATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGGACAGAAAGGGGAAGAGGATAGATGTCCTCAAATaGGGGCTTGGCTCACAGGTG +
Preference number: 2 (lower is better)
Translates to: NSQEVSCRQVSRDRKGKRIDVLK*GLGSQV
Trigger: CACCTGTGAGCCAAGCCCCCATTTGAGGACATCTAT...CCTCTTCCCCTTTCTGTCCCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp CTATTGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAAGCCTGCAGGAAGCCTTaGACTCGCTCTTCCCGTCTG +
Preference number: 2 (lower is better)
Translates to: LLVTRPRFSVLVGDFHPQACRKP*TRSSRL
Trigger: CAGACGGGAAGAGCGAGTCCAAGGCTTCCTGCAGGC...TTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR TCA 90 bp GGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGCCGGTGTGGGGCACCTaGAATAGAGTTGCTCAGGCA +
Preference number: 2 (lower is better)
Translates to: GFTDWLLNRRVWHLCLILPVWGT*NRVAQA
Trigger: TGCCTGAGCAACTCTATTTCAGGTGCCCCACACCGG...CAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp TTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGCCTCTTCTTTCCAAGAAGTGTTTGGTTCTaGTCAGTCCTGTTGTGTTAC +
Preference number: 2 (lower is better)
Translates to: FAALAAGRRRRPLCLFFPRSVWF*SVLLCY
Trigger: GTAACACAACAGGACTGAGCAGAACCAAACACTTCT...TGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp GGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGTTGCTGGCTGGTACTTaGCGGTGTGGGGCACCTGAA +
Preference number: 2 (lower is better)
Translates to: GFTDWLLNRRVWHLCLILLLAGT*RCGAPE
Trigger: TTCAGGTGCCCCACACCGGCAAGTACCAGCCAGCAA...CAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp CCTCCAGCCCCTCATTCCCGCCTTAATTGTAGGGCTCTGCATTATAGCCGCATAAAAATGTACAGCACCTaGTCTCCAGGAACCCTGTGC +
Preference number: 2 (lower is better)
Translates to: PPAPHSRLNCRALHYSRIKMYST*SPGTLC
Trigger: GCACAGGGTTCCTGGAGAGCAGGTGCTGTACATTTT...TATGCGGCTATAATGCAGAGCCCTACAATTAAGGCGGGAATGAGGGGCTGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp TGGTTGGTGTTGCTGGCTGGTACTTGCCGGTGTGGGGCACCTGAAATAGAGTTGGGTGGAAGGCTAAAATaGAAGGGTAAAGAGCTAGGG +
Preference number: 2 (lower is better)
Translates to: WLVLLAGTCRCGAPEIELGGRLK*KGKELG
Trigger: CCCTAGCTCTTTACCCTTCCATTTTAGCCTTCCACC...CAACTCTATTTCAGGTGCCCCACACCGGCAAGTACCAGCCAGCAACACCAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp AAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTCTCGGGGCCAGTCTCATTTaGGAGTGGAGCCTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: KVRGFLCALATTCKISPLGASLI*EWSLAP
Trigger: TGGGGCCAGGCTCCACTCCCAAATGAGACTGGCCCC...GAGAGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp GATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGGGGAGCAGAGTCAGTTaGAAGAAGTGTTTGGTTCTG +
Preference number: 2 (lower is better)
Translates to: DGGFAKGFTDWLLNRRVWGSRVS*KKCLVL
Trigger: CAGAACCAAACACTTCTTCCAACTGACTCTGCTCCC...CCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp CCGCATAATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGTAAAGCTGTTGGTGTTGCTGGCTaGTACTTGCCGGTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: PHNSCLPNYGCQQPHCKAVGVAG*YLPVWG
Trigger: GCCCCACACCGGCAAGTACCAGCCAGCAACACCAAC...AGCTTTACAATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATTATGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CAA 90 bp AGACAGGCAGCTGATGAGTTGTGGCCCTTTGCTCTCCAAACCCTATaGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTCAC +
Preference number: 2 (lower is better)
Translates to: RQAADELWPFALQTL*VTRPRFSVLVGDFH
Trigger: GTGAAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAGAGCAAAGGGCCACAACTCATCAGCTGCCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CAA 90 bp GGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTaGATTCTGGGAGCATGGACAATAGCCAAGAAGTCTCTTGCCGCC +
Preference number: 2 (lower is better)
Translates to: GFTDWLLNRRVWHLC*ILGAWTIAKKSLAA
Trigger: GGCGGCAAGAGACTTCTTGGCTATTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CAA 90 bp ATGTCCTCAAATGGGGGCTTGGCTCACAGGTGGAAGGACACTAAATaGGTCCCATCTGATTTCTTGAGGCAAGGGTTGAACCTGGCTTGC +
Preference number: 2 (lower is better)
Translates to: MSSNGGLAHRWKDTK*VPSDFLRQGLNLAC
Trigger: GCAAGCCAGGTTCAACCCTTGCCTCAAGAAATCAGATGGGACCAATTTAGTGTCCTTCCACCTGTGAGCCAAGCCCCCATTTGAGGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR TCA 90 bp CTCAGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCGCCAGGTCAAAAAGCTaGGAGAAACCTCGAAGAGTG +
Preference number: 2 (lower is better)
Translates to: LRPKRDASPINHLYCTPIARSKS*EKPRRV
Trigger: CACTCTTCGAGGTTTCTCTCAGCTTTTTGACCTGGC...GATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR TCA 90 bp CCTGGCTTGCACAAATCACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGCCGGTGTGGGGCACCTaGAATAGAGTTGCTCAGGCA +
Preference number: 2 (lower is better)
Translates to: PGLHKSHLSKATTSSTILPVWGT*NRVAQA
Trigger: TGCCTGAGCAACTCTATTTCAGGTGCCCCACACCGG...CAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTGATTTGTGCAAGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR TCA 90 bp ATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAAGGCTAAAATGGAAGCCAGTCAGCTCGCTTaGGTTCCAAGGCCTGCAGGA +
Preference number: 2 (lower is better)
Translates to: IQGRAKSFVEAGWKAKMEASQLA*VPRPAG
Trigger: TCCTGCAGGCCTTGGAACTCAAGCGAGCTGACTGGC...TTCCATTTTAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR GCA 90 bp CCTGGCTTGCACAAATCACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGCCTGGCCCCATGCCCTaGAAGAGGAGGAGAAAAGCT +
Preference number: 2 (lower is better)
Translates to: PGLHKSHLSKATTSSTILPGPMP*KRRRKA
Trigger: AGCTTTTCTCCTCCTCTTGCAGGGCATGGGGCCAGG...CAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTGATTTGTGCAAGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp GCTTTGACCCTCACAAGCAGAGGACCTAGAACAAGCTTTGCCATGCCAAGAATAAAGCGGCTGAACTTCTaGCGGGCCAGATCCATAAGC +
Preference number: 2 (lower is better)
Translates to: ALTLTSRGPRTSFAMPRIKRLNF*RARSIS
Trigger: GCTTATGGATCTGGCCCGGCAGAAGTTCAGCCGCTT...TATTCTTGGCATGGCAAAGCTTGTTCTAGGTCCTCTGCTTGTGAGGGTCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR CCA 90 bp AAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTCTCGAAAAGGAAGGGGAGTaGAGCCCTGGAGGCAGAGGG +
Preference number: 2 (lower is better)
Translates to: KVRGFLCALATTCKISPLEKEGE*SPGGRG
Trigger: CCCTCTGCCTCCAGGGCTCCACTCCCCTTCCTTTTC...GAGAGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp GCTTTGACCCTCACAAGCAGAGGACCTAGAACAAGCTTTGCCATGCCAAGAATAGCCCAAAGGTATCTATaGCCAGCAAACCTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: ALTLTSRGPRTSFAMPRIAQRYL*PANLAW
Trigger: CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGC...TATTCTTGGCATGGCAAAGCTTGTTCTAGGTCCTCTGCTTGTGAGGGTCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp GATTCTGGGAGCATGGACAATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGGGTTTAGTGTACTCGTaGGAGACTTTCACCCTCAAT +
Preference number: 2 (lower is better)
Translates to: DSGSMDNSQEVSCRQVSRGLVYS*ETFTLN
Trigger: ATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACC...CCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATTGTCCATGCTCCCAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp CCTCCAGCCCCTCATTCCCGCCTTAATTGTAGGGCTCTGCATTATAGCCGCATAGGTGGAAGGCTAAAATaGAAGGGTAAAGAGCTAGGG +
Preference number: 2 (lower is better)
Translates to: PPAPHSRLNCRALHYSRIGGRLK*KGKELG
Trigger: CCCTAGCTCTTTACCCTTCCATTTTAGCCTTCCACC...TATGCGGCTATAATGCAGAGCCCTACAATTAAGGCGGGAATGAGGGGCTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp AAGGCACTAATCCTCTCAGCAGCTCTGCAGCAAGTCCTGGCAGAGGGAGGTAAGTCGACAATAGGTAATTaGATTGTAATCGCCCGCCTG +
Preference number: 2 (lower is better)
Translates to: KALILSAALQQVLAEGGKSTIGN*IVIARL
Trigger: CAGGCGGGCGATTACAATCCAATTACCTATTGTCGA...CTTACCTCCCTCTGCCAGGACTTGCTGCAGAGCTGCTGAGAGGATTAGTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp CCTCCAGCCCCTCATTCCCGCCTTAATTGTAGGGCTCTGCATTATAGCCGCATAGGAGAAAAGCTTGTGTaGGCTGAGTCGACAATAGGT +
Preference number: 2 (lower is better)
Translates to: PPAPHSRLNCRALHYSRIGEKLV*AESTIG
Trigger: ACCTATTGTCGACTCAGCCCACACAAGCTTTTCTCC...TATGCGGCTATAATGCAGAGCCCTACAATTAAGGCGGGAATGAGGGGCTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp ATGTCCTCAAATGGGGGCTTGGCTCACAGGTGGAAGGACACTAAATTGGTCCCATGTTACCCTGAACCATaGAGGGGGCCAGTCTCATTT +
Preference number: 2 (lower is better)
Translates to: MSSNGGLAHRWKDTKLVPCYPEP*RGPVSF
Trigger: AAATGAGACTGGCCCCCTCCATGGTTCAGGGTAACA...TGGGACCAATTTAGTGTCCTTCCACCTGTGAGCCAAGCCCCCATTTGAGGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp GATTCTGGGAGCATGGACAATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGGTTGGAAGAAGTGTTTaGTTCTGCTCAGTCCTGTTG +
Preference number: 2 (lower is better)
Translates to: DSGSMDNSQEVSCRQVSRVGRSV*FCSVLL
Trigger: CAACAGGACTGAGCAGAACCAAACACTTCTTCCAAC...CCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATTGTCCATGCTCCCAGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp AAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTCTCGTTGGTGTTGCTGGCTaGTACTTGCCGGTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: KVRGFLCALATTCKISPLVGVAG*YLPVWG
Trigger: GCCCCACACCGGCAAGTACCAGCCAGCAACACCAAC...GAGAGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp CCTGGCTTGCACAAATCACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGCACTACATCGCCTCCTaGGGCAGCTTCTCCCTACTC +
Preference number: 2 (lower is better)
Translates to: PGLHKSHLSKATTSSTILHYIAS*GSFSLL
Trigger: GAGTAGGGAGAAGCTGCCCCAGGAGGCGATGTAGTG...CAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTGATTTGTGCAAGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp AATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGGACAGAAAGGGGAAGAGGTGTTGTAGTTCTTCGTaGCCTGTACAGCTTGTGCAA +
Preference number: 2 (lower is better)
Translates to: NSQEVSCRQVSRDRKGKRCCSSS*PVQLVQ
Trigger: TTGCACAAGCTGTACAGGCCACGAAGAACTACAACA...CCTCTTCCCCTTTCTGTCCCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR TCA 90 bp CTCAGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCTCCAAACCCTATTGGTaGCCAGACCTAGGTTTAGTG +
Preference number: 2 (lower is better)
Translates to: LRPKRDASPINHLYCTPISKPYW*PDLGLV
Trigger: CACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGA...GATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR TCA 90 bp TCTGGAACTGCAGGATGGCCTCGAAGAGGTTCCAAAATGTATACTCTGGCCACACTCTCACAGCATTGCTaGTCTCATGACGGGATGTGT +
Preference number: 2 (lower is better)
Translates to: SGTAGWPRRGSKMYTLATLSQHC*SHDGMC
Trigger: ACACATCCCGTCATGAGATCAGCAATGCTGTGAGAG...TGTGGCCAGAGTATACATTTTGGAACCTCTTCGAGGCCATCCTGCAGTTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR GCA 90 bp GGGCTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTATCAGGAAAGGAGGTaGCTTTCACCAAGAAAAGGA +
Preference number: 2 (lower is better)
Translates to: GLPSQAKGTPFIIRKGGAYQERR*LSPRKG
Trigger: TCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA...GGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
3UTR-3UTR GCA 90 bp TGGTTGGTGTTGCTGGCTGGTACTTGCCGGTGTGGGGCACCTGAAATAGAGTTGAGAAGTGTTTGGTTCTaGTCAGTCCTGTTGTGTTAC +
Preference number: 2 (lower is better)
Translates to: WLVLLAGTCRCGAPEIELRSVWF*SVLLCY
Trigger: GTAACACAACAGGACTGAGCAGAACCAAACACTTCT...CAACTCTATTTCAGGTGCCCCACACCGGCAAGTACCAGCCAGCAACACCAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp ATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAAGGCTAAAATGGAATTGCTGGCTGGTACTTaGCGGTGTGGGGCACCTGAA +
Preference number: 2 (lower is better)
Translates to: IQGRAKSFVEAGWKAKMELLAGT*RCGAPE
Trigger: TTCAGGTGCCCCACACCGGCAAGTACCAGCCAGCAA...TTCCATTTTAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp TGCACAAATCACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGCAGCCCTAGGGCAGATTCCGTTTaGTGCCTCCAGCCCCTCATT +
Preference number: 2 (lower is better)
Translates to: CTNHTCPKQPRVLLFCSPRADSV*CLQPLI
Trigger: AATGAGGGGCTGGAGGCAGCAAACGGAATCTGCCCT...AGGGCTGCAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTGATTTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp CTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGGGAGCATGGACAATACCTCTTCCGCTCCTCTaGATACATGTCTCGGGCCTT +
Preference number: 2 (lower is better)
Translates to: LLNRRVWHLCLILGAWTIPLPLL*IHVSGL
Trigger: AAGGCCCGAGACATGTATGCAGAGGAGCGGAAGAGG...TATTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR CCA 90 bp ATGTCCTCAAATGGGGGCTTGGCTCACAGGTGGAAGGACACTAAATTGGTCCCAGCAATCAGTACTGTGTaGTGGGAGAGGGTAGAGATT +
Preference number: 2 (lower is better)
Translates to: MSSNGGLAHRWKDTKLVPAISTV*WERVEI
Trigger: AATCTCTACCCTCTCCCACCACACAGTACTGATTGC...TGGGACCAATTTAGTGTCCTTCCACCTGTGAGCCAAGCCCCCATTTGAGGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp TACCCCAATCATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACTGTTACCCTGAACCATaGAGGGGGCCAGTCTCATTT +
Preference number: 2 (lower is better)
Translates to: YPNHITESQTQETGLNSHCYPEP*RGPVSF
Trigger: AAATGAGACTGGCCCCCTCCATGGTTCAGGGTAACA...GTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATATGATTGGGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp CCTCCAGCCCCTCATTCCCGCCTTAATTGTAGGGCTCTGCATTATAGCCGCATAAGAAACCTCGAAGAGTaGAGTGGGAATCAGAGTTTG +
Preference number: 2 (lower is better)
Translates to: PPAPHSRLNCRALHYSRIRNLEE*SGNQSL
Trigger: CAAACTCTGATTCCCACTCCACTCTTCGAGGTTTCT...TATGCGGCTATAATGCAGAGCCCTACAATTAAGGCGGGAATGAGGGGCTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp GGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGTTTGGTTGGTGTTGCTaGCTGGTACTTGCCGGTGTG +
Preference number: 2 (lower is better)
Translates to: GFTDWLLNRRVWHLCLILFGWCC*LVLAGV
Trigger: CACACCGGCAAGTACCAGCCAGCAACACCAACCAAA...CAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp ATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGCTCATAGGGCAAAAGAGAGTAGCATTTaGTTGGTGTTGCTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: ITESQTQETGLNSHAHRAKESSI*LVLLAG
Trigger: ACCAGCCAGCAACACCAACCAAATGCTACTCTCTTT...TGCCCTATGAGCGTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp ATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGCTCATAGGGAAAGGGTTCACTGATTaGCTTCTCAATCGCCGTGTC +
Preference number: 2 (lower is better)
Translates to: ILRKVRPRRQDSTATLIGKGFTD*LLNRRV
Trigger: GACACGGCGATTGAGAAGCCAATCAGTGAACCCTTT...CCCTATGAGCGTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp TACCCCAATCATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGGCTTGGCTCACAGGTaGAAGGACACTAAATTGGTC +
Preference number: 2 (lower is better)
Translates to: YPNHITESQTQETGLNSHGLAHR*KDTKLV
Trigger: GACCAATTTAGTGTCCTTCCACCTGTGAGCCAAGCC...GTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATATGATTGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CAA 90 bp TTGGCTCACAGGTGGAAGGACACTAAATTGGTCCCATCTGATTTCTaGAGGCAAGGGTTGAACCTGGCTTGCACAAATCACACCTGTCCA +
Preference number: 2 (lower is better)
Translates to: LAHRWKDTKLVPSDF*RQGLNLACTNHTCP
Trigger: TGGACAGGTGTGATTTGTGCAAGCCAGGTTCAACCCTTGCCTCAAGAAATCAGATGGGACCAATTTAGTGTCCTTCCACCTGTGAGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR TCA 90 bp AGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCATAGCCAGGTCAAAAAGCTaGGAGAAACCTCGAAGAGTG +
Preference number: 2 (lower is better)
Translates to: RPKRDASPINHLYCTPIIARSKS*EKPRRV
Trigger: CACTCTTCGAGGTTTCTCTCAGCTTTTTGACCTGGC...TATGATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR TCA 90 bp CTCAGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCTCTGGCATTTATGCTTaGTTCTGGGAGCATGGACAA +
Preference number: 2 (lower is better)
Translates to: LRPKRDASPINHLYCTPISGIYA*FWEHGQ
Trigger: TTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGA...GATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp TGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGGGAGCATGGACAGCAATCAGTACTGTGTaGTGGGAGAGGGTAGAGATT +
Preference number: 2 (lower is better)
Translates to: WLLNRRVWHLCLILGAWTAISTV*WERVEI
Trigger: AATCTCTACCCTCTCCCACCACACAGTACTGATTGC...TGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp CTCAGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCTCGACAATAGGTAATTaGATTGTAATCGCCCGCCTG +
Preference number: 2 (lower is better)
Translates to: LRPKRDASPINHLYCTPISTIGN*IVIARL
Trigger: CAGGCGGGCGATTACAATCCAATTACCTATTGTCGA...GATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp ATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGCTCATAGGGAAAGAGAGTAGCATTTaGTTGGTGTTGCTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: ILRKVRPRRQDSTATLIGKESSI*LVLLAG
Trigger: ACCAGCCAGCAACACCAACCAAATGCTACTCTCTTT...CCCTATGAGCGTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp AGGGAGCCAGGTCAAAAAGCTGAGAGAAACCTCGAAGAGTGGAGTGGGAATCAGTTGCAGAAAGTAAAATaGGAAGTCTGGCATGGTGGC +
Preference number: 2 (lower is better)
Translates to: REPGQKAERNLEEWSGNQLQKVK*EVWHGG
Trigger: GCCACCATGCCAGACTTCCCATTTTACTTTCTGCAA...CTGATTCCCACTCCACTCTTCGAGGTTTCTCTCAGCTTTTTGACCTGGCTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp ATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGCTCATAGGGCATTGATTCTGGGAGCATaGACAATAGCCAAGAAGTCT +
Preference number: 2 (lower is better)
Translates to: ITESQTQETGLNSHAHRALILGA*TIAKKS
Trigger: AGACTTCTTGGCTATTGTCCATGCTCCCAGAATCAA...TGCCCTATGAGCGTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp AATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGTAAAGCTGTAAAAGGGGAGTGCCAGGTGTaGATGGGGGCTTTGCCAAAG +
Preference number: 2 (lower is better)
Translates to: NSCLPNYGCQQPHCKAVKGECQV*MGALPK
Trigger: CTTTGGCAAAGCCCCCATCCACACCTGGCACTCCCC...TTTTACAGCTTTACAATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp AAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTGCATTTGGTTGGTGTTaGTGGCTGGTACTTGCCGGT +
Preference number: 2 (lower is better)
Translates to: KGFTDWLLNRRVWHLCLIAFGWC*WLVLAG
Trigger: ACCGGCAAGTACCAGCCAGCAACACCAACCAAATGC...AATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp TGGCCCTTTGCTCTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCGTTGGAAGAAGTGTTTaGTTCTGCTCAGTCCTGTTG +
Preference number: 2 (lower is better)
Translates to: WPFALQTLLVTRPRFSVLVGRSV*FCSVLL
Trigger: CAACAGGACTGAGCAGAACCAAACACTTCTTCCAAC...GAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAGAGCAAAGGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp AGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCATAAAAGGGTTCACTGATTaGCTTCTCAATCGCCGTGTC +
Preference number: 2 (lower is better)
Translates to: RPKRDASPINHLYCTPIIKGFTD*LLNRRV
Trigger: GACACGGCGATTGAGAAGCCAATCAGTGAACCCTTT...TATGATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CAA 90 bp AGAAGAAGGAAAATGGACTTTAAAGAGAGTAGCATTTGGTTGGTGTaGCTGGCTGGTACTTGCCGGTGTGGGGCACCTGAAATAGAGTTG +
Preference number: 2 (lower is better)
Translates to: RRRKMDFKESSIWLV*LAGTCRCGAPEIEL
Trigger: CAACTCTATTTCAGGTGCCCCACACCGGCAAGTACCAGCCAGCAACACCAACCAAATGCTACTCTCTTTAAAGTCCATTTTCCTTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR TCA 90 bp AATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGTAAAGCTGTAAAAGTGGGAATCAGAGTTTaGGATGGTGAGGGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: NSCLPNYGCQQPHCKAVKVGIRV*DGEGRE
Trigger: CTCCCTGCCCTCACCATCTCAAACTCTGATTCCCAC...TTTTACAGCTTTACAATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR TCA 90 bp AGGAAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTGCCAGGTCAAAAAGCTaGGAGAAACCTCGAAGAGTG +
Preference number: 2 (lower is better)
Translates to: RKVRGFLCALATTCKISPARSKS*EKPRRV
Trigger: CACTCTTCGAGGTTTCTCTCAGCTTTTTGACCTGGC...AGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp CCTGCAAGAGGAGGAGAAAAGCTTGTGTGGGCTGAGTCGACAATAGGTAATTGGTATCAGGAAAGGAGGTaGCTTTCACCAAGAAAAGGA +
Preference number: 2 (lower is better)
Translates to: PARGGEKLVWAESTIGNWYQERR*LSPRKG
Trigger: TCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA...CCAATTACCTATTGTCGACTCAGCCCACACAAGCTTTTCTCCTCCTCTTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp TGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGGGAGCATGGACATATCAGGAAAGGAGGTaGCTTTCACCAAGAAAAGGA +
Preference number: 2 (lower is better)
Translates to: WLLNRRVWHLCLILGAWTYQERR*LSPRKG
Trigger: TCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA...TGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp AGGAAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTAAAATGTACAGCACCTaGTCTCCAGGAACCCTGTGC +
Preference number: 2 (lower is better)
Translates to: RKVRGFLCALATTCKISPKMYST*SPGTLC
Trigger: GCACAGGGTTCCTGGAGAGCAGGTGCTGTACATTTT...AGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp TTCATGAAAAGTCATTCTTGGAAAAACACTACCAAAGGGCCAGGAGGGTATAATCTTGAACTCCTGGCCTaGCTCAAGTGGACTGCCCAC +
Preference number: 2 (lower is better)
Translates to: FMKSHSWKNTTKGPGGYNLELLA*LKWTAH
Trigger: GTGGGCAGTCCACTTGAGGCAGGCCAGGAGTTCAAG...ATTATACCCTCCTGGCCCTTTGGTAGTGTTTTTCCAAGAATGACTTTTCATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374185.7
3UTR-3UTR CCA 90 bp CCTGGCTTGCACAAATCACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGGGGAGCAGAGTCAGTTaGAAGAAGTGTTTGGTTCTG +
Preference number: 2 (lower is better)
Translates to: PGLHKSHLSKATTSSTILGSRVS*KKCLVL
Trigger: CAGAACCAAACACTTCTTCCAACTGACTCTGCTCCC...CAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTGATTTGTGCAAGCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR TCA 90 bp AAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTCTCTCCAAACCCTATTGGTaGCCAGACCTAGGTTTAGTG +
Preference number: 2 (lower is better)
Translates to: KVRGFLCALATTCKISPLSKPYW*PDLGLV
Trigger: CACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGA...GAGAGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR TCA 90 bp CCGCATAATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGTAAAGCTTCTGGCATTTATGCTTaGTTCTGGGAGCATGGACAA +
Preference number: 2 (lower is better)
Translates to: PHNSCLPNYGCQQPHCKASGIYA*FWEHGQ
Trigger: TTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGA...AGCTTTACAATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATTATGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp ATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGCTCATAGGGCACCTTACCCAAATAACTaGCTGCCTATTAGTTATTTA +
Preference number: 2 (lower is better)
Translates to: ITESQTQETGLNSHAHRAPYPNN*LPISYL
Trigger: TAAATAACTAATAGGCAGGCAGTTATTTGGGTAAGG...TGCCCTATGAGCGTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp CTATTGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAAAGAAGTGTTTGGTTCTaGTCAGTCCTGTTGTGTTAC +
Preference number: 2 (lower is better)
Translates to: LLVTRPRFSVLVGDFHPQRSVWF*SVLLCY
Trigger: GTAACACAACAGGACTGAGCAGAACCAAACACTTCT...TTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR GCA 90 bp ATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAAGGCTAAAATGGAACACACCCCATGCTTCTaGAGTTTCTCCTTTTCTTCC +
Preference number: 2 (lower is better)
Translates to: IQGRAKSFVEAGWKAKMEHTPCF*SFSFSS
Trigger: GGAAGAAAAGGAGAAACTGCAGAAGCATGGGGTGTG...TTCCATTTTAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR CCA 90 bp AAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTGAGCCAAATCTTTTGTaGAAGCTGGGTGGAAGGCTA +
Preference number: 2 (lower is better)
Translates to: KGFTDWLLNRRVWHLCLIEPNLL*KLGGRL
Trigger: TAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTC...AATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp AAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTGCAATCAGTACTGTGTaGTGGGAGAGGGTAGAGATT +
Preference number: 2 (lower is better)
Translates to: KGFTDWLLNRRVWHLCLIAISTV*WERVEI
Trigger: AATCTCTACCCTCTCCCACCACACAGTACTGATTGC...AATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp AAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTCTCGCAATCAGTACTGTGTaGTGGGAGAGGGTAGAGATT +
Preference number: 2 (lower is better)
Translates to: KVRGFLCALATTCKISPLAISTV*WERVEI
Trigger: AATCTCTACCCTCTCCCACCACACAGTACTGATTGC...GAGAGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp CATTATAGCCGCATAATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGGGAGCAGAGTCAGTTaGAAGAAGTGTTTGGTTCTG +
Preference number: 2 (lower is better)
Translates to: HYSRIIHASLIMAVNSPIGSRVS*KKCLVL
Trigger: CAGAACCAAACACTTCTTCCAACTGACTCTGCTCCC...AATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATTATGCGGCTATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp GAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCATATTACGGAAAGAGAGTAGCATTTGGTTaGTGTTGCTGGCTGGTACTT +
Preference number: 2 (lower is better)
Translates to: EMPAPLITSTVPQSYYGKRVAFG*CCWLVL
Trigger: AAGTACCAGCCAGCAACACCAACCAAATGCTACTCT...CTTTCCGTAATATGATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp TGCACAAATCACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGCAGCCCTAAAGAGAGTAGCATTTaGTTGGTGTTGCTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: CTNHTCPKQPRVLLFCSPKESSI*LVLLAG
Trigger: ACCAGCCAGCAACACCAACCAAATGCTACTCTCTTT...AGGGCTGCAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTGATTTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp CTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGGGAGCATGGACAATATTGCAGAAAGTAAAATaGGAAGTCTGGCATGGTGGC +
Preference number: 2 (lower is better)
Translates to: LLNRRVWHLCLILGAWTILQKVK*EVWHGG
Trigger: GCCACCATGCCAGACTTCCCATTTTACTTTCTGCAA...TATTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp TTCATGAAAAGTCATTCTTGGAAAAACACTACCAAAGGGCCAGGAGGGTATAATCTGGTCTTGAACTCCTaGCCTGCCTCAAGTGGACTG +
Preference number: 2 (lower is better)
Translates to: FMKSHSWKNTTKGPGGYNLVLNS*PASSGL
Trigger: CAGTCCACTTGAGGCAGGCCAGGAGTTCAAGACCAG...ATTATACCCTCCTGGCCCTTTGGTAGTGTTTTTCCAAGAATGACTTTTCATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374185.7
3UTR-3UTR CCA 90 bp TGCACAAATCACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGCAGCCCTGATGAGGAGAGCGGTTaGTATAGAGGCACTTATCAA +
Preference number: 2 (lower is better)
Translates to: CTNHTCPKQPRVLLFCSPDEESG*YRGTYQ
Trigger: TTGATAAGTGCCTCTATACCAACCGCTCTCCTCATC...AGGGCTGCAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTGATTTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR GCA 90 bp GCTTTGACCCTCACAAGCAGAGGACCTAGAACAAGCTTTGCCATGCCAAGAATAATGACGGGATGTGTATaGAAAACAGACATTCAGGAA +
Preference number: 2 (lower is better)
Translates to: ALTLTSRGPRTSFAMPRIMTGCV*KTDIQE
Trigger: TTCCTGAATGTCTGTTTTGCATACACATCCCGTCAT...TATTCTTGGCATGGCAAAGCTTGTTCTAGGTCCTCTGCTTGTGAGGGTCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR CCA 90 bp AAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTCTCAAAGAGCTAGGGTTTTaGGGAGAACTCTTCCCTGAA +
Preference number: 2 (lower is better)
Translates to: KVRGFLCALATTCKISPLKELGF*GELFPE
Trigger: TTCAGGGAAGAGTTCTCCCCAAAACCCTAGCTCTTT...GAGAGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp ATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAAGGCTAAAATGGAAAGAAACCTCGAAGAGTaGAGTGGGAATCAGAGTTTG +
Preference number: 2 (lower is better)
Translates to: IQGRAKSFVEAGWKAKMERNLEE*SGNQSL
Trigger: CAAACTCTGATTCCCACTCCACTCTTCGAGGTTTCT...TTCCATTTTAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp AATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGTAAAGCTGTAAAAGGCTTGGCTCACAGGTaGAAGGACACTAAATTGGTC +
Preference number: 2 (lower is better)
Translates to: NSCLPNYGCQQPHCKAVKGLAHR*KDTKLV
Trigger: GACCAATTTAGTGTCCTTCCACCTGTGAGCCAAGCC...TTTTACAGCTTTACAATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp TTCATGAAAAGTCATTCTTGGAAAAACACTACCAAAGGGCCAGGAGGGTATAATCTCTGGCCAAGTACATaGCACAGAGGGGCTTTATGG +
Preference number: 2 (lower is better)
Translates to: FMKSHSWKNTTKGPGGYNLWPST*HRGALW
Trigger: CCATAAAGCCCCTCTGTGCCATGTACTTGGCCAGAG...ATTATACCCTCCTGGCCCTTTGGTAGTGTTTTTCCAAGAATGACTTTTCATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374185.7
3UTR-3UTR CCA 90 bp GAAGAAGGAAAATGGACTTTAAAGAGAGTAGCATTTGGTTGGTGTTGCTGGCTGAAAGAGCTAGGGTTTTaGGGAGAACTCTTCCCTGAA +
Preference number: 2 (lower is better)
Translates to: EEGKWTLKRVAFGWCCWLKELGF*GELFPE
Trigger: TTCAGGGAAGAGTTCTCCCCAAAACCCTAGCTCTTT...CAGCCAGCAACACCAACCAAATGCTACTCTCTTTAAAGTCCATTTTCCTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CCA 90 bp AATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGTAAAGCTGTAAAAGGTTTAGTGTACTCGTaGGAGACTTTCACCCTCAAT +
Preference number: 2 (lower is better)
Translates to: NSCLPNYGCQQPHCKAVKGLVYS*ETFTLN
Trigger: ATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACC...TTTTACAGCTTTACAATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR GCA 72 bp CGGGCCAGCCAGTCAGCTCGCTTGAGTTCCAAGGCCTaGAGGAAGCCTTGGACTCGCTCTTCCCGTCTGGCC +
Preference number: 3 (lower is better)
Translates to: RASQSARLSSKA*RKPWTRSSRLA
Trigger: GGCCAGACGGGAAGAGCGAGTCCAAGGCTTCCTGCAGGCCTTGGAACTCAAGCGAGCTGACTGGCTGGCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR CCA 72 bp TGTGCAAGCGTGTCCTTCGGAGCTGGGCGTCCCCACTaGCTTGGAGCCCCTCTCGCAGCAGCTGCTCTGTCA +
Preference number: 3 (lower is better)
Translates to: CASVSFGAGRPH*LGAPLAAAALS
Trigger: TGACAGAGCAGCTGCTGCGAGAGGGGCTCCAAGCCAGTGGGGACGCCCAGCTCCGAAGGACACGCTTGCACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR CAA 90 bp CCAGGGCCTACAGGCCCTTCTGTTACCCTGAACCATGGAGGGGGCCAGTCTCATGGGGGCCAGTCTCATTaGGGAGTGGAGCCTGGCCCC +
Preference number: 3 (lower is better)
Translates to: PGPTGPSVTLNHGGGQSHGGQSH*GVEPGP
Trigger: GGGGCCAGGCTCCACTCCCAAATGAGACTGGCCCCC...ATGAGACTGGCCCCCTCCATGGTTCAGGGTAACAGAAGGGCCTGTAGGCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR GCA 72 bp CCTTGGACTCGCTCTTCCCGTCTGGCCGAGAGTTTGTaGAAGCGTGTCCTTCGGAGCTGGGCGTCCCCACTG +
Preference number: 3 (lower is better)
Translates to: PWTRSSRLAESL*KRVLRSWASPL
Trigger: CAGTGGGGACGCCCAGCTCCGAAGGACACGCTTGCACAAACTCTCGGCCAGACGGGAAGAGCGAGTCCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR CCA 72 bp AGCCCCTCTCGCAGCAGCTGCTCTGTCACTGTAGCCTaGTCCCTCTCCAGCTGCTGCCTCTTCCGCTCCTCT +
Preference number: 3 (lower is better)
Translates to: SPSRSSCSVTVA*SLSSCCLFRSS
Trigger: AGAGGAGCGGAAGAGGCAGCAGCTGGAGAGGGACCAGGCTACAGTGACAGAGCAGCTGCTGCGAGAGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR CCA 72 bp AAGCGTGTCCTTCGGAGCTGGGCGTCCCCACTGGCTTaGAGCCCCTCTCGCAGCAGCTGCTCTGTCACTGTA +
Preference number: 3 (lower is better)
Translates to: KRVLRSWASPLA*SPSRSSCSVTV
Trigger: TACAGTGACAGAGCAGCTGCTGCGAGAGGGGCTCCAAGCCAGTGGGGACGCCCAGCTCCGAAGGACACGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR CAA 90 bp TTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGCCTCTTCTTTCCAGGGGGCCAGTCTCATTaGGGAGTGGAGCCTGGCCCC +
Preference number: 3 (lower is better)
Translates to: FAALAAGRRRRPLCLFFPGGQSH*GVEPGP
Trigger: GGGGCCAGGCTCCACTCCCAAATGAGACTGGCCCCC...TGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 72 bp ACCAGGGCCTACAGGCCCTTCTGTTACCCTGAACCATaGAGGGGGCCAGTCTCATTTGGGAGTGGAGCCTGG +
Preference number: 3 (lower is better)
Translates to: TRAYRPFCYPEP*RGPVSFGSGAW
Trigger: CCAGGCTCCACTCCCAAATGAGACTGGCCCCCTCCATGGTTCAGGGTAACAGAAGGGCCTGTAGGCCCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 72 bp AGGCCTGCAGGAAGCCTTGGACTCGCTCTTCCCGTCTaGCCGAGAGTTTGTGCAAGCGTGTCCTTCGGAGCT +
Preference number: 3 (lower is better)
Translates to: RPAGSLGLALPV*PRVCASVSFGA
Trigger: AGCTCCGAAGGACACGCTTGCACAAACTCTCGGCCAGACGGGAAGAGCGAGTCCAAGGCTTCCTGCAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR CAA 90 bp CCTCCAGCCCCTCATTCCCGCCTTAATTGTAGGGCTCTGCATTATAGCCGCATAGGGGGCCAGTCTCATTaGGGAGTGGAGCCTGGCCCC +
Preference number: 3 (lower is better)
Translates to: PPAPHSRLNCRALHYSRIGGQSH*GVEPGP
Trigger: GGGGCCAGGCTCCACTCCCAAATGAGACTGGCCCCC...TATGCGGCTATAATGCAGAGCCCTACAATTAAGGCGGGAATGAGGGGCTGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp AATCGCCCGCCTGGCTTCCGCGCACCATTGGGGGTGCTGAGTCTTTCAGTGAGCAGCATTTGGTTGGTGTaGCTGGCTGGTACTTGCCGG +
Preference number: 3 (lower is better)
Translates to: NRPPGFRAPLGVLSLSVSSIWLV*LAGTCR
Trigger: CCGGCAAGTACCAGCCAGCAACACCAACCAAATGCT...GCTCACTGAAAGACTCAGCACCCCCAATGGTGCGCGGAAGCCAGGCGGGCGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR GCA 72 bp TCCAGGAACCCTGTGCCAGGGATTGGTAGAGGGGAGTaGCAGGTGTGGATGGGGGCTTTGCCAAAGGGTTCA +
Preference number: 3 (lower is better)
Translates to: SRNPVPGIGRGE*QVWMGALPKGS
Trigger: TGAACCCTTTGGCAAAGCCCCCATCCACACCTGGCACTCCCCTCTACCAATCCCTGGCACAGGGTTCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR GCA 72 bp AGCTGCTCTGTCACTGTAGCCTGGTCCCTCTCCAGCTaGTGCCTCTTCCGCTCCTCTGCATACATGTCTCGG +
Preference number: 3 (lower is better)
Translates to: SCSVTVAWSLSS*CLFRSSAYMSR
Trigger: CCGAGACATGTATGCAGAGGAGCGGAAGAGGCAGCAGCTGGAGAGGGACCAGGCTACAGTGACAGAGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR CCA 72 bp GCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTaGGGGGCTCCCCAGCCAAGCAAAGGGAACACCATT +
Preference number: 3 (lower is better)
Translates to: AAQRYLWPANLA*GAPQPSKGNTI
Trigger: AATGGTGTTCCCTTTGCTTGGCTGGGGAGCCCCCCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
3UTR CCA 72 bp TCAGCTCGCTTGAGTTCCAAGGCCTGCAGGAAGCCTTaGACTCGCTCTTCCCGTCTGGCCGAGAGTTTGTGC +
Preference number: 3 (lower is better)
Translates to: SARLSSKACRKP*TRSSRLAESLC
Trigger: GCACAAACTCTCGGCCAGACGGGAAGAGCGAGTCCAAGGCTTCCTGCAGGCCTTGGAACTCAAGCGAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR CAA 90 bp TTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGCCTCTTCTTTCCAAGCATTTGGTTGGTGTaGCTGGCTGGTACTTGCCGG +
Preference number: 3 (lower is better)
Translates to: FAALAAGRRRRPLCLFFPSIWLV*LAGTCR
Trigger: CCGGCAAGTACCAGCCAGCAACACCAACCAAATGCT...TGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp ATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCTGGCCACAGAACGGGTaGGAACACCAGGCAGGAGTG +
Preference number: 3 (lower is better)
Translates to: MGALPKGSLIGFSIAVSGWPQNG*EHQAGV
Trigger: CACTCCTGCCTGGTGTTCCAACCCGTTCTGTGGCCA...GCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR TCA 72 bp TCAGTTCACCAGGGCCTACAGGCCCTTCTGTTACCCTaGACCATGGAGGGGGCCAGTCTCATTTGGGAGTGG +
Preference number: 3 (lower is better)
Translates to: SVHQGLQALLLP*TMEGASLIWEW
Trigger: CCACTCCCAAATGAGACTGGCCCCCTCCATGGTTCAGGGTAACAGAAGGGCCTGTAGGCCCTGGTGAACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp GATTCTGGGAGCATGGACAATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGACTATTTTGCAGCCCTaGCTGCTGGGCGACGACGAC +
Preference number: 3 (lower is better)
Translates to: DSGSMDNSQEVSCRQVSRTILQP*LLGDDD
Trigger: GTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGT...CCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATTGTCCATGCTCCCAGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR GCA 72 bp TTCTGCTCAGTCCTGTTGTGTTACAGGGGAGGCCTGTaGTGGATTCAGTTCACCAGGGCCTACAGGCCCTTC +
Preference number: 3 (lower is better)
Translates to: FCSVLLCYRGGL*WIQFTRAYRPF
Trigger: GAAGGGCCTGTAGGCCCTGGTGAACTGAATCCAGCACAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR GCA 72 bp CTCAACAGCCACGCTCATAGGGCAGATTCCGTTTGCTaGCTCCAGCCCCTCATTCCCGCCTTAATTGTAGGG +
Preference number: 3 (lower is better)
Translates to: LNSHAHRADSVC*LQPLIPALIVG
Trigger: CCCTACAATTAAGGCGGGAATGAGGGGCTGGAGGCAGCAAACGGAATCTGCCCTATGAGCGTGGCTGTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 72 bp TGCTCAGTCCTGTTGTGTTACAGGGGAGGCCTGTGCTaGATTCAGTTCACCAGGGCCTACAGGCCCTTCTGT +
Preference number: 3 (lower is better)
Translates to: CSVLLCYRGGLC*IQFTRAYRPFC
Trigger: ACAGAAGGGCCTGTAGGCCCTGGTGAACTGAATCCAGCACAGGCCTCCCCTGTAACACAACAGGACTGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp GATTCTGGGAGCATGGACAATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGTTCTGCTCAGTCCTGTaGTGTTACAGGGGAGGCCTG +
Preference number: 3 (lower is better)
Translates to: DSGSMDNSQEVSCRQVSRFCSVL*CYRGGL
Trigger: CAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAA...CCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATTGTCCATGCTCCCAGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR TCA 72 bp GGTGTTGCTGGCTGGTACTTGCCGGTGTGGGGCACCTaGAATAGAGTTGCTCAGGCAGACAGCTCTTCAAAG +
Preference number: 3 (lower is better)
Translates to: GVAGWYLPVWGT*NRVAQADSSSK
Trigger: CTTTGAAGAGCTGTCTGCCTGAGCAACTCTATTTCAGGTGCCCCACACCGGCAAGTACCAGCCAGCAACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR GCA 72 bp GATTCTGGGAGCATGGACAATAGCCAAGAAGTCTCTTaGCGCCAGGTATCCCGGGACAGAAAGGGGAAGAGG +
Preference number: 3 (lower is better)
Translates to: DSGSMDNSQEVS*RQVSRDRKGKR
Trigger: CCTCTTCCCCTTTCTGTCCCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATTGTCCATGCTCCCAGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR GCA 72 bp GGACTCAACAGCCACGCTCATAGGGCAGATTCCGTTTaGTGCCTCCAGCCCCTCATTCCCGCCTTAATTGTA +
Preference number: 3 (lower is better)
Translates to: GLNSHAHRADSV*CLQPLIPALIV
Trigger: TACAATTAAGGCGGGAATGAGGGGCTGGAGGCAGCAAACGGAATCTGCCCTATGAGCGTGGCTGTTGAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR GCA 72 bp CCAAAGCAACCACGAGTTCTACTATTTTGCAGCCCTTaGTGCTGGGCGACGACGACGACCTCTCTGCCTCTT +
Preference number: 3 (lower is better)
Translates to: PKQPRVLLFCSP*CWATTTTSLPL
Trigger: AAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCGTGGTTGCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR GCA 72 bp CACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTaGAGCCCTTGCTGCTGGGCGACGACGACGACCTCT +
Preference number: 3 (lower is better)
Translates to: HTCPKQPRVLLF*SPCCWATTTTS
Trigger: AGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 72 bp CAACCACGAGTTCTACTATTTTGCAGCCCTTGCTGCTaGGCGACGACGACGACCTCTCTGCCTCTTCTTTCC +
Preference number: 3 (lower is better)
Translates to: QPRVLLFCSPCC*ATTTTSLPLLS
Trigger: GGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCGTGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 72 bp TTCTTCGTGGCCTGTACAGCTTGTGCAATCAGCTCCTaGAGATCCAAGGGCAACAAGTGCAGATCGCCCAGG +
Preference number: 3 (lower is better)
Translates to: FFVACTACAISS*RSKGNKCRSPR
Trigger: CCTGGGCGATCTGCACTTGTTGCCCTTGGATCTCCAGGAGCTGATTGCACAAGCTGTACAGGCCACGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR CAA 90 bp CGAGTTCTACTATTTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGGTAGAGCCAAATCTTTaGTGGAAGCTGGGTGGAAGG +
Preference number: 3 (lower is better)
Translates to: RVLLFCSPCCWATTTTSLVEPNL*WKLGGR
Trigger: CCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTAC...CAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp AATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGGACAGAAAGGGGAAGAGGGAGGAGGAGAAAAGCTaGTGTGGGCTGAGTCGACAA +
Preference number: 3 (lower is better)
Translates to: NSQEVSCRQVSRDRKGKREEEKS*CGLSRQ
Trigger: TTGTCGACTCAGCCCACACAAGCTTTTCTCCTCCTC...CCTCTTCCCCTTTCTGTCCCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp GATTCTGGGAGCATGGACAATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGACGAGTTCTACTATTTaGCAGCCCTTGCTGCTGGGC +
Preference number: 3 (lower is better)
Translates to: DSGSMDNSQEVSCRQVSRTSSTI*QPLLLG
Trigger: GCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCGT...CCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATTGTCCATGCTCCCAGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR TCA 72 bp GCCAGGTGTGGATGGGGGCTTTGCCAAAGGGTTCACTaGTTGGCTTCTCAATCGCCGTGTCTGGCATTTATG +
Preference number: 3 (lower is better)
Translates to: ARCGWGLCQRVH*LASQSPCLAFM
Trigger: CATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATCCACACCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR GCA 72 bp GAGAGTAGCATTTGGTTGGTGTTGCTGGCTGGTACTTaGCGGTGTGGGGCACCTGAAATAGAGTTGCTCAGG +
Preference number: 3 (lower is better)
Translates to: ESSIWLVLLAGT*RCGAPEIELLR
Trigger: CCTGAGCAACTCTATTTCAGGTGCCCCACACCGGCAAGTACCAGCCAGCAACACCAACCAAATGCTACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR GCA 72 bp AAGCAACCACGAGTTCTACTATTTTGCAGCCCTTGCTaGTGGGCGACGACGACGACCTCTCTGCCTCTTCTT +
Preference number: 3 (lower is better)
Translates to: KQPRVLLFCSPC*WATTTTSLPLL
Trigger: AAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCGTGGTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 72 bp CAGGATGGCCTCGAAGAGGTTCCAAAATGTATACTCTaGCCACAGAACGGGTTGGAACACCAGGCAGGAGTG +
Preference number: 3 (lower is better)
Translates to: QDGLEEVPKCIL*PQNGLEHQAGV
Trigger: CACTCCTGCCTGGTGTTCCAACCCGTTCTGTGGCCAGAGTATACATTTTGGAACCTCTTCGAGGCCATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR CAA 90 bp TTCCCTGAAATTCTGTGTGTTGAAGGATGTGCTGGTGGAAAAAGAAAGTGCATCGGGGGCCAGTCTCATTaGGGAGTGGAGCCTGGCCCC +
Preference number: 3 (lower is better)
Translates to: FPEILCVEGCAGGKRKCIGGQSH*GVEPGP
Trigger: GGGGCCAGGCTCCACTCCCAAATGAGACTGGCCCCC...GATGCACTTTCTTTTTCCACCAGCACATCCTTCAACACACAGAATTTCAGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp ACCTCTCTGCCTCTTCTTTCCACCACTACATCGCCTCCTGGGGCAGCTTCTCCCAGTTGGAAGAAGTGTTaGGTTCTGCTCAGTCCTGTT +
Preference number: 3 (lower is better)
Translates to: TSLPLLSTTTSPPGAASPSWKKC*VLLSPV
Trigger: AACAGGACTGAGCAGAACCAAACACTTCTTCCAACT...GGGAGAAGCTGCCCCAGGAGGCGATGTAGTGGTGGAAAGAAGAGGCAGAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp CTCAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTCACTCTTGGAGCGTTaGAAGTTCTCAATGCTGAAT +
Preference number: 3 (lower is better)
Translates to: LRSLSQAAQRYLWPANLASLLER*KFSMLN
Trigger: ATTCAGCATTGAGAACTTCAAACGCTCCAAGAGTGA...GGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR CAA 90 bp CTCTTCAAAGGCACTAATCCTCTCAGCAGCTCTGCAGCAAGTCCTGGCAGAGGGCCGTCTACCTCACTCTaGGAGCGTTTGAAGTTCTCA +
Preference number: 3 (lower is better)
Translates to: LFKGTNPLSSSAASPGRGPSTSL*ERLKFS
Trigger: TGAGAACTTCAAACGCTCCAAGAGTGAGGTAGACGG...CCCTCTGCCAGGACTTGCTGCAGAGCTGCTGAGAGGATTAGTGCCTTTGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR GCA 72 bp AGTTTCTCCTTTTCTTCCATCAAGCGGCTGAACTTCTaGCGGGCCAGATCCATAAGCCCGTCTACCTCACTC +
Preference number: 3 (lower is better)
Translates to: SFSFSSIKRLNF*RARSISPSTSL
Trigger: GAGTGAGGTAGACGGGCTTATGGATCTGGCCCGGCAGAAGTTCAGCCGCTTGATGGAAGAAAAGGAGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR CCA 72 bp GAAAAGCTTGTGTGGGCTGAGTCGACAATAGGTAATTaGATTGTAATCGCCCGCCTGGCTTCCGCGCACCAT +
Preference number: 3 (lower is better)
Translates to: EKLVWAESTIGN*IVIARLASAHH
Trigger: ATGGTGCGCGGAAGCCAGGCGGGCGATTACAATCCAATTACCTATTGTCGACTCAGCCCACACAAGCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 72 bp GGTGTGGATGGGGGCTTTGCCAAAGGGTTCACTGATTaGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTG +
Preference number: 3 (lower is better)
Translates to: GVDGGFAKGFTD*LLNRRVWHLCL
Trigger: CAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATCCACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp TACCCCAATCATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACTTCTGCTCAGTCCTGTaGTGTTACAGGGGAGGCCTG +
Preference number: 3 (lower is better)
Translates to: YPNHITESQTQETGLNSHFCSVL*CYRGGL
Trigger: CAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAA...GTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATATGATTGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp AATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGGACAGAAAGGGGAAGAGGTGCTCTTGCTACAACTaGCAAGATTTCACCTCTCCC +
Preference number: 3 (lower is better)
Translates to: NSQEVSCRQVSRDRKGKRCSCYN*QDFTSP
Trigger: GGGAGAGGTGAAATCTTGCAAGTTGTAGCAAGAGCA...CCTCTTCCCCTTTCTGTCCCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp GATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGTGCTCTTGCTACAACTaGCAAGATTTCACCTCTCCC +
Preference number: 3 (lower is better)
Translates to: DGGFAKGFTDWLLNRRVWCSCYN*QDFTSP
Trigger: GGGAGAGGTGAAATCTTGCAAGTTGTAGCAAGAGCA...CCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp ATGTCCTCAAATGGGGGCTTGGCTCACAGGTGGAAGGACACTAAATTGGTCCCAGTAGAGCCAAATCTTTaGTGGAAGCTGGGTGGAAGG +
Preference number: 3 (lower is better)
Translates to: MSSNGGLAHRWKDTKLVPVEPNL*WKLGGR
Trigger: CCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTAC...TGGGACCAATTTAGTGTCCTTCCACCTGTGAGCCAAGCCCCCATTTGAGGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp ATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAAGGCTAAAATGGAAGGCTTCCGCGCACCATaGGGGGTGCTGAGTCTTTCA +
Preference number: 3 (lower is better)
Translates to: IQGRAKSFVEAGWKAKMEGFRAP*GVLSLS
Trigger: TGAAAGACTCAGCACCCCCAATGGTGCGCGGAAGCC...TTCCATTTTAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp TACCCCAATCATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACACGAGTTCTACTATTTaGCAGCCCTTGCTGCTGGGC +
Preference number: 3 (lower is better)
Translates to: YPNHITESQTQETGLNSHTSSTI*QPLLLG
Trigger: GCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCGT...GTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATATGATTGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 72 bp CGCCGTGTCTGGCATTTATGCTTGATTCTGGGAGCATaGACAATAGCCAAGAAGTCTCTTGCCGCCAGGTAT +
Preference number: 3 (lower is better)
Translates to: RRVWHLCLILGA*TIAKKSLAARY
Trigger: ATACCTGGCGGCAAGAGACTTCTTGGCTATTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp GGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGGAGGAGGAGAAAAGCTaGTGTGGGCTGAGTCGACAA +
Preference number: 3 (lower is better)
Translates to: GFTDWLLNRRVWHLCLILEEEKS*CGLSRQ
Trigger: TTGTCGACTCAGCCCACACAAGCTTTTCTCCTCCTC...CAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp CTCAGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCTTCTTGAGGCAAGGGTaGAACCTGGCTTGCACAAAT +
Preference number: 3 (lower is better)
Translates to: LRPKRDASPINHLYCTPIFLRQG*NLACTN
Trigger: ATTTGTGCAAGCCAGGTTCAACCCTTGCCTCAAGAA...GATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp GGTGTGGATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTTGGAAGGACACTAAATaGGTCCCATCTGATTTCTTG +
Preference number: 3 (lower is better)
Translates to: GVDGGFAKGFTDWLLNRRWKDTK*VPSDFL
Trigger: CAAGAAATCAGATGGGACCAATTTAGTGTCCTTCCA...ACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATCCACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR TCA 72 bp ATGAGTTGTGGCCCTTTGCTCTCCAAACCCTATTGGTaGCCAGACCTAGGTTTAGTGTACTCGTGGGAGACT +
Preference number: 3 (lower is better)
Translates to: MSCGPLLSKPYW*PDLGLVYSWET
Trigger: AGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAGAGCAAAGGGCCACAACTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 72 bp GAAAGTGCATCTAAGAGACAGGCAGCTGATGAGTTGTaGCCCTTTGCTCTCCAAACCCTATTGGTGACCAGA +
Preference number: 3 (lower is better)
Translates to: ESASKRQAADEL*PFALQTLLVTR
Trigger: TCTGGTCACCAATAGGGTTTGGAGAGCAAAGGGCCACAACTCATCAGCTGCCTGTCTCTTAGATGCACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 72 bp TCTGAAGCACGCTATGGTTCATCTGGAACTGCAGGATaGCCTCGAAGAGGTTCCAAAATGTATACTCTGGCC +
Preference number: 3 (lower is better)
Translates to: SEARYGSSGTAG*PRRGSKMYTLA
Trigger: GGCCAGAGTATACATTTTGGAACCTCTTCGAGGCCATCCTGCAGTTCCAGATGAACCATAGCGTGCTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR CAA 90 bp GAAGAAGTGTTTGGTTCTGCTCAGTCCTGTTGTGTTACAGGGGAGGCCTGTGCTCTGAAATTCTGTGTGTaGAAGGATGTGCTGGTGGAA +
Preference number: 3 (lower is better)
Translates to: EEVFGSAQSCCVTGEACALKFCV*KDVLVE
Trigger: TTCCACCAGCACATCCTTCAACACACAGAATTTCAG...AGCACAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAACCAAACACTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp GAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCATATTACGGAAAGGGAAAGGACACAGCTTaGACCCTCACAAGCAGAGGA +
Preference number: 3 (lower is better)
Translates to: EMPAPLITSTVPQSYYGKGKDTA*TLTSRG
Trigger: TCCTCTGCTTGTGAGGGTCAAAGCTGTGTCCTTTCC...CTTTCCGTAATATGATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp AGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCATAGAGAGTAGCATTTGGTaGGTGTTGCTGGCTGGTACT +
Preference number: 3 (lower is better)
Translates to: RPKRDASPINHLYCTPIIESSIW*VLLAGT
Trigger: AGTACCAGCCAGCAACACCAACCAAATGCTACTCTC...TATGATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp TGCACAAATCACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGCAGCCCTAGGGTTGAACCTGGCTaGCACAAATCACACCTGTCC +
Preference number: 3 (lower is better)
Translates to: CTNHTCPKQPRVLLFCSPRVEPG*HKSHLS
Trigger: GGACAGGTGTGATTTGTGCAAGCCAGGTTCAACCCT...AGGGCTGCAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTGATTTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR TCA 72 bp CCCCAGGCCATCTCTCTCACAGCATTGCTGATCTCATaGCGGGATGTGTATGCAAAACAGACATTCAGGAAA +
Preference number: 3 (lower is better)
Translates to: PQAISLTALLIS*RDVYAKQTFRK
Trigger: TTTCCTGAATGTCTGTTTTGCATACACATCCCGTCATGAGATCAGCAATGCTGTGAGAGAGATGGCCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR GCA 72 bp AAATGGACTTTAAAGAGAGTAGCATTTGGTTGGTGTTaGTGGCTGGTACTTGCCGGTGTGGGGCACCTGAAA +
Preference number: 3 (lower is better)
Translates to: KWTLKRVAFGWC*WLVLAGVGHLK
Trigger: TTTCAGGTGCCCCACACCGGCAAGTACCAGCCAGCAACACCAACCAAATGCTACTCTCTTTAAAGTCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp AAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTGAGGAGGAGAAAAGCTaGTGTGGGCTGAGTCGACAA +
Preference number: 3 (lower is better)
Translates to: KGFTDWLLNRRVWHLCLIEEEKS*CGLSRQ
Trigger: TTGTCGACTCAGCCCACACAAGCTTTTCTCCTCCTC...AATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp CATTATAGCCGCATAATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGGAAAGGACACAGCTTaGACCCTCACAAGCAGAGGA +
Preference number: 3 (lower is better)
Translates to: HYSRIIHASLIMAVNSPIGKDTA*TLTSRG
Trigger: TCCTCTGCTTGTGAGGGTCAAAGCTGTGTCCTTTCC...AATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATTATGCGGCTATAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp AAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTCTCGGAAAGGACACAGCTTaGACCCTCACAAGCAGAGGA +
Preference number: 3 (lower is better)
Translates to: KVRGFLCALATTCKISPLGKDTA*TLTSRG
Trigger: TCCTCTGCTTGTGAGGGTCAAAGCTGTGTCCTTTCC...GAGAGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp CATTATAGCCGCATAATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTAGGGTTGAACCTGGCTaGCACAAATCACACCTGTCC +
Preference number: 3 (lower is better)
Translates to: HYSRIIHASLIMAVNSPIRVEPG*HKSHLS
Trigger: GGACAGGTGTGATTTGTGCAAGCCAGGTTCAACCCT...AATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATTATGCGGCTATAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp GCTTTGACCCTCACAAGCAGAGGACCTAGAACAAGCTTTGCCATGCCAAGAATACTGAAATTCTGTGTGTaGAAGGATGTGCTGGTGGAA +
Preference number: 3 (lower is better)
Translates to: ALTLTSRGPRTSFAMPRILKFCV*KDVLVE
Trigger: TTCCACCAGCACATCCTTCAACACACAGAATTTCAG...TATTCTTGGCATGGCAAAGCTTGTTCTAGGTCCTCTGCTTGTGAGGGTCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp GAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCATATTACGGAAAGTGCTCTTGCTACAACTaGCAAGATTTCACCTCTCCC +
Preference number: 3 (lower is better)
Translates to: EMPAPLITSTVPQSYYGKCSCYN*QDFTSP
Trigger: GGGAGAGGTGAAATCTTGCAAGTTGTAGCAAGAGCA...CTTTCCGTAATATGATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp TACCCCAATCATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGTTTCCTGTGTGCTCTaGCTACAACTTGCAAGATTT +
Preference number: 3 (lower is better)
Translates to: YPNHITESQTQETGLNSHVSCVL*LQLARF
Trigger: AAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAAC...GTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATATGATTGGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 72 bp AGAAGAAGGAAAATGGACTTTAAAGAGAGTAGCATTTaGTTGGTGTTGCTGGCTGGTACTTGCCGGTGTGGG +
Preference number: 3 (lower is better)
Translates to: RRRKMDFKESSI*LVLLAGTCRCG
Trigger: CCCACACCGGCAAGTACCAGCCAGCAACACCAACCAAATGCTACTCTCTTTAAAGTCCATTTTCCTTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 72 bp ACACAAGAATACGATAGATGTCCTCAAATGGGGGCTTaGCTCACAGGTGGAAGGACACTAAATTGGTCCCAT +
Preference number: 3 (lower is better)
Translates to: TQEYDRCPQMGA*LTGGRTLNWSH
Trigger: ATGGGACCAATTTAGTGTCCTTCCACCTGTGAGCCAAGCCCCCATTTGAGGACATCTATCGTATTCTTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp GAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCATATTACGGAAAGAGTTGGAAGAAGTGTTaGGTTCTGCTCAGTCCTGTT +
Preference number: 3 (lower is better)
Translates to: EMPAPLITSTVPQSYYGKSWKKC*VLLSPV
Trigger: AACAGGACTGAGCAGAACCAAACACTTCTTCCAACT...CTTTCCGTAATATGATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp TGCACAAATCACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGCAGCCCTAGTTGGAAGAAGTGTTaGGTTCTGCTCAGTCCTGTT +
Preference number: 3 (lower is better)
Translates to: CTNHTCPKQPRVLLFCSPSWKKC*VLLSPV
Trigger: AACAGGACTGAGCAGAACCAAACACTTCTTCCAACT...AGGGCTGCAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTGATTTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 72 bp AAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTaGCATTTATGCTTGATTCTGGGAGCATGGACAATA +
Preference number: 3 (lower is better)
Translates to: KGFTDWLLNRRV*HLCLILGAWTI
Trigger: TATTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 72 bp AACAGACATTCAGGAAACACTTGTTGTAGTTCTTCGTaGCCTGTACAGCTTGTGCAATCAGCTCCTGGAGAT +
Preference number: 3 (lower is better)
Translates to: NRHSGNTCCSSS*PVQLVQSAPGD
Trigger: ATCTCCAGGAGCTGATTGCACAAGCTGTACAGGCCACGAAGAACTACAACAAGTGTTTCCTGAATGTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR-3UTR CAA 90 bp AAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGAAATTCTGTGTGTaGAAGGATGTGCTGGTGGAA +
Preference number: 3 (lower is better)
Translates to: KGFTDWLLNRRVWHLCLILKFCV*KDVLVE
Trigger: TTCCACCAGCACATCCTTCAACACACAGAATTTCAG...AATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CCA 72 bp GGAAGGCTAAAATGGAAGGGTAAAGAGCTAGGGTTTTaGGGAGAACTCTTCCCTGAAATTCTGTGTGTTGAA +
Preference number: 3 (lower is better)
Translates to: GRLKWKGKELGF*GELFPEILCVE
Trigger: TTCAACACACAGAATTTCAGGGAAGAGTTCTCCCCAAAACCCTAGCTCTTTACCCTTCCATTTTAGCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR-3UTR CAA 90 bp AGGAAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTGTTTCCTGTGTGCTCTaGCTACAACTTGCAAGATTT +
Preference number: 3 (lower is better)
Translates to: RKVRGFLCALATTCKISPVSCVL*LQLARF
Trigger: AAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAAC...AGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGGGCGTCCCCACTGGCTTaGAGCCCCTCTCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GACPRQPKGIYGQQTWPGASPLA*SPSRSS
Trigger: GCTGCTGCGAGAGGGGCTCCAAGCCAGTGGGGACGC...CCCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp GGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGGCCAGCAAACCTGGCCTaGGGGGCTCCCCAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: GACPRQPKGIYGQQTWPGPANLA*GAPQPS
Trigger: GCTTGGCTGGGGAGCCCCCCAGGCCAGGTTTGCTGG...CCCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
3UTR CAA 72 bp CAAGCGTGTCCTTCGGAGCTGGGCGTCCCCACTGGCTaGGAGCCCCTCTCGCAGCAGCTGCTCTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: QACPSELGVPTG*EPLSQQLLCHC
Trigger: ACAGTGACAGAGCAGCTGCTGCGAGAGGGGCTCCAAGCCAGTGGGGACGCCCAGCTCCGAAGGACACGCTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS-3UTR CCA 90 bp CCAGGGCCTACAGGCCCTTCTGTTACCCTGAACCATGGAGGGGGCCAGTCTCATGCTGGGCGTCCCCACTaGCTTGGAGCCCCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: PGPTGPSVTLNHGGGQSHAGRPH*LGAPLA
Trigger: TGCGAGAGGGGCTCCAAGCCAGTGGGGACGCCCAGC...ATGAGACTGGCCCCCTCCATGGTTCAGGGTAACAGAAGGGCCTGTAGGCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGGTGCAGCCCTTGCTGCTaGGCGACGACGACGACCTCT +
Preference number: 4 (lower is better)
Translates to: GACPRQPKGIYGQQTWPGCSPCC*ATTTTS
Trigger: AGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCA...CCCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp AATCGCCCGCCTGGCTTCCGCGCACCATTGGGGGTGCTGAGTCTTTCAGTGAGCTGCAGCCCTTGCTGCTaGGCGACGACGACGACCTCT +
Preference number: 4 (lower is better)
Translates to: NRPPGFRAPLGVLSLSVSCSPCC*ATTTTS
Trigger: AGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCA...GCTCACTGAAAGACTCAGCACCCCCAATGGTGCGCGGAAGCCAGGCGGGCGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp GGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGGCTTGTTGAAGCCCTGTaGGTGGCCTTCCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: GACPRQPKGIYGQQTWPGLVEAL*VAFLPL
Trigger: GAGCGGCAGGAAGGCCACTCACAGGGCTTCAACAAG...CCCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp GGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGGTGTGAGTGGCCTTCCTaGCGCTCCACCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: GACPRQPKGIYGQQTWPGCEWPS*RSTWHF
Trigger: GAAGTGCCAGGTGGAGCGGCAGGAAGGCCACTCACA...CCCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp AATCGCCCGCCTGGCTTCCGCGCACCATTGGGGGTGCTGAGTCTTTCAGTGAGCTTGAAGCCCTGTGAGTaGCCTTCCTGCCGCTCCACC +
Preference number: 4 (lower is better)
Translates to: NRPPGFRAPLGVLSLSVSLKPCE*PSCRST
Trigger: GGTGGAGCGGCAGGAAGGCCACTCACAGGGCTTCAA...GCTCACTGAAAGACTCAGCACCCCCAATGGTGCGCGGAAGCCAGGCGGGCGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR CCA 90 bp ACCTCTCTGCCTCTTCTTTCCACCACTACATCGCCTCCTGGGGCAGCTTCTCCCCGTGTCCTTCGGAGCTaGGCGTCCCCACTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: TSLPLLSTTTSPPGAASPRVLRS*ASPLAW
Trigger: CCAAGCCAGTGGGGACGCCCAGCTCCGAAGGACACG...GGGAGAAGCTGCCCCAGGAGGCGATGTAGTGGTGGAAAGAAGAGGCAGAGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGGGCCTGCAGGAAGCCTTaGACTCGCTCTTCCCGTCTG +
Preference number: 4 (lower is better)
Translates to: GACPRQPKGIYGQQTWPGACRKP*TRSSRL
Trigger: CAGACGGGAAGAGCGAGTCCAAGGCTTCCTGCAGGC...CCCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp CGAGTTCTACTATTTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGCCAGCAAACCTGGCCTaGGGGGCTCCCCAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: RVLLFCSPCCWATTTTSLPANLA*GAPQPS
Trigger: GCTTGGCTGGGGAGCCCCCCAGGCCAGGTTTGCTGG...CAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CCTCAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCGGGGCCAGTCTCATTTaGGAGTGGAGCCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PQEPVPGSPKVSMASKPGGASLI*EWSLAP
Trigger: TGGGGCCAGGCTCCACTCCCAAATGAGACTGGCCCC...GCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CAA 72 bp AAGCCTTGGACTCGCTCTTCCCGTCTGGCCGAGAGTTaGTGCAAGCGTGTCCTTCGGAGCTGGGCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: KPWTRSSRLAES*CKRVLRSWASP
Trigger: TGGGGACGCCCAGCTCCGAAGGACACGCTTGCACAAACTCTCGGCCAGACGGGAAGAGCGAGTCCAAGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS-3UTR TCA 90 bp ACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCAGGCAGCCCTTGTTGAAGCCCTGTaGGTGGCCTTCCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: TRGRLSPSILLRSLSQAALVEAL*VAFLPL
Trigger: GAGCGGCAGGAAGGCCACTCACAGGGCTTCAACAAG...GGCTGCCTGGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR TCA 90 bp CCTCAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCGCCAGTCAGCTCGCTTaGGTTCCAAGGCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PQEPVPGSPKVSMASKPGASQLA*VPRPAG
Trigger: TCCTGCAGGCCTTGGAACTCAAGCGAGCTGACTGGC...GCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR TCA 90 bp CAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGCCCTTCTGTTACCCTaGACCATGGAGGGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: QEPVPGSPKVSMASKPGLALLLP*TMEGAS
Trigger: ACTGGCCCCCTCCATGGTTCAGGGTAACAGAAGGGC...CAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp AATCGCCCGCCTGGCTTCCGCGCACCATTGGGGGTGCTGAGTCTTTCAGTGAGCCCGGTGTGGGGCACCTaGAATAGAGTTGCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: NRPPGFRAPLGVLSLSVSPVWGT*NRVAQA
Trigger: TGCCTGAGCAACTCTATTTCAGGTGCCCCACACCGG...GCTCACTGAAAGACTCAGCACCCCCAATGGTGCGCGGAAGCCAGGCGGGCGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CCTCAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCTCCAAGGGCAACAAGTaGAGATCGCCCAGGACCCGG +
Preference number: 4 (lower is better)
Translates to: PQEPVPGSPKVSMASKPGSKGNK*RSPRTR
Trigger: CCGGGTCCTGGGCGATCTGCACTTGTTGCCCTTGGA...GCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp AGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGCCCTCTCGCAGCAGCTaGTCTGTCACTGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RSLSQAAQRYLWPANLAWPSRSS*SVTVAW
Trigger: CCAGGCTACAGTGACAGAGCAGCTGCTGCGAGAGGG...CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp ACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCAGGCAGCCTTCAGGCTGATGCAGTaGCCAGACGGGCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: TRGRLSPSILLRSLSQAAFRLMQ*PDGPAS
Trigger: ACTGGCTGGCCCGTCTGGGCACTGCATCAGCCTGAA...GGCTGCCTGGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp CCTCAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCTTCAGGCTGATGCAGTaGCCAGACGGGCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: PQEPVPGSPKVSMASKPGFRLMQ*PDGPAS
Trigger: ACTGGCTGGCCCGTCTGGGCACTGCATCAGCCTGAA...GCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp AGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGTTCAGGCTGATGCAGTaGCCAGACGGGCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: RSLSQAAQRYLWPANLAWFRLMQ*PDGPAS
Trigger: ACTGGCTGGCCCGTCTGGGCACTGCATCAGCCTGAA...CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp AATCGCCCGCCTGGCTTCCGCGCACCATTGGGGGTGCTGAGTCTTTCAGTGAGCTCCTCTCAGCAGCTCTaGAGCAAGTCCTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: NRPPGFRAPLGVLSLSVSSSQQL*SKSWQR
Trigger: CCTCTGCCAGGACTTGCTGCAGAGCTGCTGAGAGGA...GCTCACTGAAAGACTCAGCACCCCCAATGGTGCGCGGAAGCCAGGCGGGCGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGTTGAAGCCCTGTGAGTaGCCTTCCTGCCGCTCCACC +
Preference number: 4 (lower is better)
Translates to: QEPVPGSPKVSMASKPGLLKPCE*PSCRST
Trigger: GGTGGAGCGGCAGGAAGGCCACTCACAGGGCTTCAA...CAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp AATCGCCCGCCTGGCTTCCGCGCACCATTGGGGGTGCTGAGTCTTTCAGTGAGCCTCGCTCTTCCCGTCTaGCCGAGAGTTTGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: NRPPGFRAPLGVLSLSVSLALPV*PRVCAS
Trigger: GCTTGCACAAACTCTCGGCCAGACGGGAAGAGCGAG...GCTCACTGAAAGACTCAGCACCCCCAATGGTGCGCGGAAGCCAGGCGGGCGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CCTCAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCGCCTGCAGGAAGCCTTaGACTCGCTCTTCCCGTCTG +
Preference number: 4 (lower is better)
Translates to: PQEPVPGSPKVSMASKPGACRKP*TRSSRL
Trigger: CAGACGGGAAGAGCGAGTCCAAGGCTTCCTGCAGGC...GCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp CCTCAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCGAAAAGGAAGGGGAGTaGAGCCCTGGAGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: PQEPVPGSPKVSMASKPGEKEGE*SPGGRG
Trigger: CCCTCTGCCTCCAGGGCTCCACTCCCCTTCCTTTTC...GCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp ACCTCTCTGCCTCTTCTTTCCACCACTACATCGCCTCCTGGGGCAGCTTCTCCCGGGGCCAGTCTCATTTaGGAGTGGAGCCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: TSLPLLSTTTSPPGAASPGASLI*EWSLAP
Trigger: TGGGGCCAGGCTCCACTCCCAAATGAGACTGGCCCC...GGGAGAAGCTGCCCCAGGAGGCGATGTAGTGGTGGAAAGAAGAGGCAGAGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp AGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGGGGGAGTGCCAGGTGTaGATGGGGGCTTTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: RSLSQAAQRYLWPANLAWGECQV*MGALPK
Trigger: CTTTGGCAAAGCCCCCATCCACACCTGGCACTCCCC...CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp AGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGCTTCCATCAAGCGGCTaGACTTCTGCCGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: RSLSQAAQRYLWPANLAWLPSSG*TSAGPD
Trigger: ATCTGGCCCGGCAGAAGTTCAGCCGCTTGATGGAAG...CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR TCA 90 bp CCAGGGCCTACAGGCCCTTCTGTTACCCTGAACCATGGAGGGGGCCAGTCTCATCCGGTGTGGGGCACCTaGAATAGAGTTGCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: PGPTGPSVTLNHGGGQSHPVWGT*NRVAQA
Trigger: TGCCTGAGCAACTCTATTTCAGGTGCCCCACACCGG...ATGAGACTGGCCCCCTCCATGGTTCAGGGTAACAGAAGGGCCTGTAGGCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp ACCTCTCTGCCTCTTCTTTCCACCACTACATCGCCTCCTGGGGCAGCTTCTCCCTCCAAGGGCAACAAGTaGAGATCGCCCAGGACCCGG +
Preference number: 4 (lower is better)
Translates to: TSLPLLSTTTSPPGAASPSKGNK*RSPRTR
Trigger: CCGGGTCCTGGGCGATCTGCACTTGTTGCCCTTGGA...GGGAGAAGCTGCCCCAGGAGGCGATGTAGTGGTGGAAAGAAGAGGCAGAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp AGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGAGCCAAGAAGTCTCTTaGCGCCAGGTATCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: RSLSQAAQRYLWPANLAWSQEVS*RQVSRD
Trigger: GTCCCGGGATACCTGGCGGCAAGAGACTTCTTGGCT...CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp ACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCAGGCAGCCCCACCTGGCACTTCTTaGCATAGCGACGGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: TRGRLSPSILLRSLSQAAPPGTS*HSDGSR
Trigger: ACGGGAACCGTCGCTATGCCAAGAAGTGCCAGGTGG...GGCTGCCTGGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp CAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGCCACCTGGCACTTCTTaGCATAGCGACGGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: QEPVPGSPKVSMASKPGLPPGTS*HSDGSR
Trigger: ACGGGAACCGTCGCTATGCCAAGAAGTGCCAGGTGG...CAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp CAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGTCTGTCACTGTAGCCTaGTCCCTCTCCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QEPVPGSPKVSMASKPGLSVTVA*SLSSCC
Trigger: GCAGCAGCTGGAGAGGGACCAGGCTACAGTGACAGA...CAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGGCGTCCCCACTGGCTTaGAGCCCCTCTCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWASPLA*SPSRSS
Trigger: GCTGCTGCGAGAGGGGCTCCAAGCCAGTGGGGACGC...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CCA 90 bp ATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCCGTGTCCTTCGGAGCTaGGCGTCCCCACTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: MGALPKGSLIGFSIAVSGRVLRS*ASPLAW
Trigger: CCAAGCCAGTGGGGACGCCCAGCTCCGAAGGACACG...GCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp ACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCAGGCAGCCCTCGCTCTTCCCGTCTaGCCGAGAGTTTGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: TRGRLSPSILLRSLSQAALALPV*PRVCAS
Trigger: GCTTGCACAAACTCTCGGCCAGACGGGAAGAGCGAG...GGCTGCCTGGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp TTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGCCTCTTCTTTCCAAGGGGAGGCCTGTGCTaGATTCAGTTCACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: FAALAAGRRRRPLCLFFPRGGLC*IQFTRA
Trigger: GGCCCTGGTGAACTGAATCCAGCACAGGCCTCCCCT...TGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp ACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCAGGCAGCCCACTACATCGCCTCCTaGGGCAGCTTCTCCCTACTC +
Preference number: 4 (lower is better)
Translates to: TRGRLSPSILLRSLSQAAHYIAS*GSFSLL
Trigger: GAGTAGGGAGAAGCTGCCCCAGGAGGCGATGTAGTG...GGCTGCCTGGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp AGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGGTGGGAATCAGAGTTTaGGATGGTGAGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RSLSQAAQRYLWPANLAWVGIRV*DGEGRE
Trigger: CTCCCTGCCCTCACCATCTCAAACTCTGATTCCCAC...CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCAGGCACCCTCTCGCAGCAGCTaGTCTGTCACTGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CTRGRLSPSILLRSLSQAPSRSS*SVTVAW
Trigger: CCAGGCTACAGTGACAGAGCAGCTGCTGCGAGAGGG...TGCCTGGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp ACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCAGGCAGCCTTGAGTTCCAAGGCCTaGAGGAAGCCTTGGACTCGC +
Preference number: 4 (lower is better)
Translates to: TRGRLSPSILLRSLSQAALSSKA*RKPWTR
Trigger: GCGAGTCCAAGGCTTCCTGCAGGCCTTGGAACTCAA...GGCTGCCTGGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp AGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGTACAGGGGAGGCCTGTaGTGGATTCAGTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: RSLSQAAQRYLWPANLAWYRGGL*WIQFTR
Trigger: CCTGGTGAACTGAATCCAGCACAGGCCTCCCCTGTA...CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp GGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGGGCATTTGGTTGGTGTTaGTGGCTGGTACTTGCCGGT +
Preference number: 4 (lower is better)
Translates to: GACPRQPKGIYGQQTWPGAFGWC*WLVLAG
Trigger: ACCGGCAAGTACCAGCCAGCAACACCAACCAAATGC...CCCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp ACCTCTCTGCCTCTTCTTTCCACCACTACATCGCCTCCTGGGGCAGCTTCTCCCATTGGTAGAGGGGAGTaGCAGGTGTGGATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: TSLPLLSTTTSPPGAASPIGRGE*QVWMGA
Trigger: AGCCCCCATCCACACCTGGCACTCCCCTCTACCAAT...GGGAGAAGCTGCCCCAGGAGGCGATGTAGTGGTGGAAAGAAGAGGCAGAGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp AGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTGCTGGGCGTCCCCACTaGCTTGGAGCCCCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: RFSVLVGDFHPQSSSGACAGRPH*LGAPLA
Trigger: TGCGAGAGGGGCTCCAAGCCAGTGGGGACGCCCAGC...ACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGCTGGGCGTCCCCACTaGCTTGGAGCCCCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALAGRPH*LGAPLA
Trigger: TGCGAGAGGGGCTCCAAGCCAGTGGGGACGCCCAGC...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGCGTGTCCTTCGGAGCTaGGCGTCCCCACTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWRVLRS*ASPLAW
Trigger: CCAAGCCAGTGGGGACGCCCAGCTCCGAAGGACACG...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CCA 90 bp ATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGCTCATAGGGCCAGCAAACCTGGCCTaGGGGGCTCCCCAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: ILRKVRPRRQDSTATLIGPANLA*GAPQPS
Trigger: GCTTGGCTGGGGAGCCCCCCAGGCCAGGTTTGCTGG...CCCTATGAGCGTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp AGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGAGGGGAAGAGGCGGGTaGGGTATAGGAAAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: RSLSQAAQRYLWPANLAWRGRGG*GIGKLG
Trigger: CCCTAACTTTCCTATACCCCACCCGCCTCTTCCCCT...CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GGTGTGGATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTTGCAGCCCTTGCTGCTaGGCGACGACGACGACCTCT +
Preference number: 4 (lower is better)
Translates to: GVDGGFAKGFTDWLLNRRCSPCC*ATTTTS
Trigger: AGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCA...ACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATCCACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp ACCTGCTCTCCAGGAACCCTGTGCCAGGGATTGGTAGAGGGGAGTGCCAGGTGTCCTCAAATGGGGGCTTaGCTCACAGGTGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: TCSPGTLCQGLVEGSARCPQMGA*LTGGRT
Trigger: TGTCCTTCCACCTGTGAGCCAAGCCCCCATTTGAGG...ACACCTGGCACTCCCCTCTACCAATCCCTGGCACAGGGTTCCTGGAGAGCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp ACCTCTGGCCAAGTACATGGCACAGAGGGGCTTTATGGTTTGGTACAGGCCTGCACCAGCCAGGTAATCTaGTTAGCTCCGCTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: TSGQVHGTEGLYGLVQACTSQVI*LAPLGA
Trigger: CGCGCCCAGCGGAGCTAATCAGATTACCTGGCTGGT...GCAGGCCTGTACCAAACCATAAAGCCCCTCTGTGCCATGTACTTGGCCAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR TCA 90 bp AGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGTTGGGCCTGCCTTTATaGTGTTGGCACAGAACCGCT +
Preference number: 4 (lower is better)
Translates to: RSLSQAAQRYLWPANLAWLGLPL*CWHRTA
Trigger: AGCGGTTCTGTGCCAACATCATAAAGGCAGGCCCAA...CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR TCA 90 bp GGGCTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCGCCAGTCAGCTCGCTTaGGTTCCAAGGCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: GLPSQAKGTPFIIRKGGAASQLA*VPRPAG
Trigger: TCCTGCAGGCCTTGGAACTCAAGCGAGCTGACTGGC...GGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR TCA 90 bp CCTCAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCTGCCAAAGGGTTCACTaGTTGGCTTCTCAATCGCCG +
Preference number: 4 (lower is better)
Translates to: PQEPVPGSPKVSMASKPGCQRVH*LASQSP
Trigger: CGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCA...GCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp ACCTCTGGCCAAGTACATGGCACAGAGGGGCTTTATGGTTTGGTACAGGCCTGCCTAGGATTACAGGCGTaGGCTGCCATGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TSGQVHGTEGLYGLVQACLGLQA*AAMLAQ
Trigger: CTGGGCCAGCATGGCAGCTCACGCCTGTAATCCTAG...GCAGGCCTGTACCAAACCATAAAGCCCCTCTGTGCCATGTACTTGGCCAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR GCA 90 bp AATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGGACAGAAAGGGGAAGAGGTGTGAGTGGCCTTCCTaGCGCTCCACCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: NSQEVSCRQVSRDRKGKRCEWPS*RSTWHF
Trigger: GAAGTGCCAGGTGGAGCGGCAGGAAGGCCACTCACA...CCTCTTCCCCTTTCTGTCCCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR GCA 90 bp GGGCTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTGTGAGTGGCCTTCCTaGCGCTCCACCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: GLPSQAKGTPFIIRKGGACEWPS*RSTWHF
Trigger: GAAGTGCCAGGTGGAGCGGCAGGAAGGCCACTCACA...GGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp ACCTCTCTGCCTCTTCTTTCCACCACTACATCGCCTCCTGGGGCAGCTTCTCCCAAGCGGCTGAACTTCTaGCGGGCCAGATCCATAAGC +
Preference number: 4 (lower is better)
Translates to: TSLPLLSTTTSPPGAASPKRLNF*RARSIS
Trigger: GCTTATGGATCTGGCCCGGCAGAAGTTCAGCCGCTT...GGGAGAAGCTGCCCCAGGAGGCGATGTAGTGGTGGAAAGAAGAGGCAGAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR GCA 90 bp GGTGTGGATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTTCCAAGGGCAACAAGTaGAGATCGCCCAGGACCCGG +
Preference number: 4 (lower is better)
Translates to: GVDGGFAKGFTDWLLNRRSKGNK*RSPRTR
Trigger: CCGGGTCCTGGGCGATCTGCACTTGTTGCCCTTGGA...ACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATCCACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CCAGGGCCTACAGGCCCTTCTGTTACCCTGAACCATGGAGGGGGCCAGTCTCATGGCCTGTACAGCTTGTaGAATCAGCTCCTGGAGATC +
Preference number: 4 (lower is better)
Translates to: PGPTGPSVTLNHGGGQSHGLYSL*NQLLEI
Trigger: GATCTCCAGGAGCTGATTGCACAAGCTGTACAGGCC...ATGAGACTGGCCCCCTCCATGGTTCAGGGTAACAGAAGGGCCTGTAGGCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGGCCTGTACAGCTTGTaGAATCAGCTCCTGGAGATC +
Preference number: 4 (lower is better)
Translates to: QEPVPGSPKVSMASKPGLGLYSL*NQLLEI
Trigger: GATCTCCAGGAGCTGATTGCACAAGCTGTACAGGCC...CAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp CTCTTCAAAGGCACTAATCCTCTCAGCAGCTCTGCAGCAAGTCCTGGCAGAGGGCCCTCTCGCAGCAGCTaGTCTGTCACTGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LFKGTNPLSSSAASPGRGPSRSS*SVTVAW
Trigger: CCAGGCTACAGTGACAGAGCAGCTGCTGCGAGAGGG...CCCTCTGCCAGGACTTGCTGCAGAGCTGCTGAGAGGATTAGTGCCTTTGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CGAGTTCTACTATTTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGCTGGCCGAGAGTTTGTaGAAGCGTGTCCTTCGGAGC +
Preference number: 4 (lower is better)
Translates to: RVLLFCSPCCWATTTTSLLAESL*KRVLRS
Trigger: GCTCCGAAGGACACGCTTGCACAAACTCTCGGCCAG...CAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp GGGCTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTCAGGCTGATGCAGTaGCCAGACGGGCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: GLPSQAKGTPFIIRKGGAFRLMQ*PDGPAS
Trigger: ACTGGCTGGCCCGTCTGGGCACTGCATCAGCCTGAA...GGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp TGGTTGGTGTTGCTGGCTGGTACTTGCCGGTGTGGGGCACCTGAAATAGAGTTGTGGAGCCTGGCCCCATaGCCTGCAAGAGGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: WLVLLAGTCRCGAPEIELWSLAP*PARGGE
Trigger: TTCTCCTCCTCTTGCAGGGCATGGGGCCAGGCTCCA...CAACTCTATTTCAGGTGCCCCACACCGGCAAGTACCAGCCAGCAACACCAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp AGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGCGAGTTCTACTATTTTaGAGCCCTTGCTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: RSLSQAAQRYLWPANLAWRVLLF*SPCCWA
Trigger: CGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCG...CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp ACCTCTGGCCAAGTACATGGCACAGAGGGGCTTTATGGTTTGGTACAGGCCTGCAGGCGTGAGCTGCCATaGTGGCCCAGGCCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: TSGQVHGTEGLYGLVQACRRELP*WPRPVF
Trigger: GAAAACAGGCCTGGGCCAGCATGGCAGCTCACGCCT...GCAGGCCTGTACCAAACCATAAAGCCCCTCTGTGCCATGTACTTGGCCAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR CCA 90 bp CCTCAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCACGCTATGGTTCATCTaGAACTGCAGGATGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PQEPVPGSPKVSMASKPGTLWFI*NCRMAS
Trigger: CGAGGCCATCCTGCAGTTCCAGATGAACCATAGCGT...GCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp TTGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCGCGTCCCCACTGGCTTaGAGCCCCTCTCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LVTRPRFSVLVGDFHPQSASPLA*SPSRSS
Trigger: GCTGCTGCGAGAGGGGCTCCAAGCCAGTGGGGACGC...GGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GAAGAAGTGTTTGGTTCTGCTCAGTCCTGTTGTGTTACAGGGGAGGCCTGTGCTCGTGTCCTTCGGAGCTaGGCGTCCCCACTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: EEVFGSAQSCCVTGEACARVLRS*ASPLAW
Trigger: CCAAGCCAGTGGGGACGCCCAGCTCCGAAGGACACG...AGCACAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAACCAAACACTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGCGTGTCCTTCGGAGCTaGGCGTCCCCACTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALRVLRS*ASPLAW
Trigger: CCAAGCCAGTGGGGACGCCCAGCTCCGAAGGACACG...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CCA 90 bp ATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCGCCTGCAGGAAGCCTTaGACTCGCTCTTCCCGTCTG +
Preference number: 4 (lower is better)
Translates to: MGALPKGSLIGFSIAVSGACRKP*TRSSRL
Trigger: CAGACGGGAAGAGCGAGTCCAAGGCTTCCTGCAGGC...GCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TTGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCCCAGCAAACCTGGCCTaGGGGGCTCCCCAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: LVTRPRFSVLVGDFHPQSPANLA*GAPQPS
Trigger: GCTTGGCTGGGGAGCCCCCCAGGCCAGGTTTGCTGG...GGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTTCCAGCAAACCTGGCCTaGGGGGCTCCCCAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: LPSQAKGTPFIIRKGGAFPANLA*GAPQPS
Trigger: GCTTGGCTGGGGAGCCCCCCAGGCCAGGTTTGCTGG...AAAGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp TGGTTGGTGTTGCTGGCTGGTACTTGCCGGTGTGGGGCACCTGAAATAGAGTTGGTTGGTGTTGCTGGCTaGTACTTGCCGGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: WLVLLAGTCRCGAPEIELVGVAG*YLPVWG
Trigger: GCCCCACACCGGCAAGTACCAGCCAGCAACACCAAC...CAACTCTATTTCAGGTGCCCCACACCGGCAAGTACCAGCCAGCAACACCAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CTCAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTTTGGTTGGTGTTGCTaGCTGGTACTTGCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: LRSLSQAAQRYLWPANLAFGWCC*LVLAGV
Trigger: CACACCGGCAAGTACCAGCCAGCAACACCAACCAAA...GGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGGCCAGTCAGCTCGCTTaGGTTCCAAGGCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWASQLA*VPRPAG
Trigger: TCCTGCAGGCCTTGGAACTCAAGCGAGCTGACTGGC...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR TCA 90 bp TGGTTGGTGTTGCTGGCTGGTACTTGCCGGTGTGGGGCACCTGAAATAGAGTTGCCGGTGTGGGGCACCTaGAATAGAGTTGCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: WLVLLAGTCRCGAPEIELPVWGT*NRVAQA
Trigger: TGCCTGAGCAACTCTATTTCAGGTGCCCCACACCGG...CAACTCTATTTCAGGTGCCCCACACCGGCAAGTACCAGCCAGCAACACCAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGTCCCTCTCCAGCTGCTaGCTCTTCCGCTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWSLSSC*LFRSSA
Trigger: TGCAGAGGAGCGGAAGAGGCAGCAGCTGGAGAGGGA...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR GCA 90 bp CCTCCAGCCCCTCATTCCCGCCTTAATTGTAGGGCTCTGCATTATAGCCGCATACCCTCTCGCAGCAGCTaGTCTGTCACTGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PPAPHSRLNCRALHYSRIPSRSS*SVTVAW
Trigger: CCAGGCTACAGTGACAGAGCAGCTGCTGCGAGAGGG...TATGCGGCTATAATGCAGAGCCCTACAATTAAGGCGGGAATGAGGGGCTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp ACCTCTCTGCCTCTTCTTTCCACCACTACATCGCCTCCTGGGGCAGCTTCTCCCGCATTTGGTTGGTGTTaGTGGCTGGTACTTGCCGGT +
Preference number: 4 (lower is better)
Translates to: TSLPLLSTTTSPPGAASPAFGWC*WLVLAG
Trigger: ACCGGCAAGTACCAGCCAGCAACACCAACCAAATGC...GGGAGAAGCTGCCCCAGGAGGCGATGTAGTGGTGGAAAGAAGAGGCAGAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TGTATACTCTGGCCACAGAACGGGTTGGAACACCAGGCAGGAGTGAGAGGTCTGTCTCCAGGAACCCTGTaGCAGGGATTGGTAGAGGGG +
Preference number: 4 (lower is better)
Translates to: CILWPQNGLEHQAGVRGLSPGTL*QGLVEG
Trigger: CCCCTCTACCAATCCCTGGCACAGGGTTCCTGGAGA...CAGACCTCTCACTCCTGCCTGGTGTTCCAACCCGTTCTGTGGCCAGAGTATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS-3UTR GCA 90 bp ACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCAGGCAGCCAAAATGTACAGCACCTaGTCTCCAGGAACCCTGTGC +
Preference number: 4 (lower is better)
Translates to: TRGRLSPSILLRSLSQAAKMYST*SPGTLC
Trigger: GCACAGGGTTCCTGGAGAGCAGGTGCTGTACATTTT...GGCTGCCTGGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp ACCTCTGGCCAAGTACATGGCACAGAGGGGCTTTATGGTTTGGTACAGGCCTGCCCACCTGGCACTTCTTaGCATAGCGACGGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: TSGQVHGTEGLYGLVQACPPGTS*HSDGSR
Trigger: ACGGGAACCGTCGCTATGCCAAGAAGTGCCAGGTGG...GCAGGCCTGTACCAAACCATAAAGCCCCTCTGTGCCATGTACTTGGCCAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR CCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGTTGAAGCCCTGTGAGTaGCCTTCCTGCCGCTCCACC +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWLKPCE*PSCRST
Trigger: GGTGGAGCGGCAGGAAGGCCACTCACAGGGCTTCAA...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CCA 90 bp TGTATACTCTGGCCACAGAACGGGTTGGAACACCAGGCAGGAGTGAGAGGTCTGTCTGTCACTGTAGCCTaGTCCCTCTCCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CILWPQNGLEHQAGVRGLSVTVA*SLSSCC
Trigger: GCAGCAGCTGGAGAGGGACCAGGCTACAGTGACAGA...CAGACCTCTCACTCCTGCCTGGTGTTCCAACCCGTTCTGTGGCCAGAGTATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS-3UTR CCA 90 bp GCTTTGACCCTCACAAGCAGAGGACCTAGAACAAGCTTTGCCATGCCAAGAATAGCTGGGCGTCCCCACTaGCTTGGAGCCCCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: ALTLTSRGPRTSFAMPRIAGRPH*LGAPLA
Trigger: TGCGAGAGGGGCTCCAAGCCAGTGGGGACGCCCAGC...TATTCTTGGCATGGCAAAGCTTGTTCTAGGTCCTCTGCTTGTGAGGGTCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTTCGTGTCCTTCGGAGCTaGGCGTCCCCACTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LPSQAKGTPFIIRKGGAFRVLRS*ASPLAW
Trigger: CCAAGCCAGTGGGGACGCCCAGCTCCGAAGGACACG...AAAGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp TTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCGAAAAGGAAGGGGAGTaGAGCCCTGGAGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: FSVLVGDFHPQSSSGACPEKEGE*SPGGRG
Trigger: CCCTCTGCCTCCAGGGCTCCACTCCCCTTCCTTTTC...GGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGGAAAAGGAAGGGGAGTaGAGCCCTGGAGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWEKEGE*SPGGRG
Trigger: CCCTCTGCCTCCAGGGCTCCACTCCCCTTCCTTTTC...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CCA 90 bp AGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTGGGGCCAGTCTCATTTaGGAGTGGAGCCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: RFSVLVGDFHPQSSSGACGASLI*EWSLAP
Trigger: TGGGGCCAGGCTCCACTCCCAAATGAGACTGGCCCC...ACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGGTTGGTGTTGCTGGCTaGTACTTGCCGGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWVGVAG*YLPVWG
Trigger: GCCCCACACCGGCAAGTACCAGCCAGCAACACCAAC...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGCCTCTTCTTTCCATTTGGTTGGTGTTGCTaGCTGGTACTTGCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: FAALAAGRRRRPLCLFFPFGWCC*LVLAGV
Trigger: CACACCGGCAAGTACCAGCCAGCAACACCAACCAAA...TGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp ATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGCTCATAGGGCAGGGGAGTGCCAGGTGTaGATGGGGGCTTTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: ITESQTQETGLNSHAHRAGECQV*MGALPK
Trigger: CTTTGGCAAAGCCCCCATCCACACCTGGCACTCCCC...TGCCCTATGAGCGTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp ATGTCCTCAAATGGGGGCTTGGCTCACAGGTGGAAGGACACTAAATTGGTCCCATGCAGCCCTTGCTGCTaGGCGACGACGACGACCTCT +
Preference number: 4 (lower is better)
Translates to: MSSNGGLAHRWKDTKLVPCSPCC*ATTTTS
Trigger: AGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCA...TGGGACCAATTTAGTGTCCTTCCACCTGTGAGCCAAGCCCCCATTTGAGGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp AGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTACCAGCCAGGTAATCTaGTTAGCTCCGCTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: RFSVLVGDFHPQSSSGACTSQVI*LAPLGA
Trigger: CGCGCCCAGCGGAGCTAATCAGATTACCTGGCTGGT...ACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR TCA 90 bp TGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCAGGCAGAACCGCTCCCAAAGTaGCAGCTCTCCTTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: CTRGRLSPSILLRSLSQAEPLPK*QLSFLD
Trigger: ATCAAGGAAGGAGAGCTGTCACTTTGGGAGCGGTTC...TGCCTGGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR TCA 90 bp AGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGGGTTCCCGTCCATTATaGATGCAATGTGTTTCGGCA +
Preference number: 4 (lower is better)
Translates to: RSLSQAAQRYLWPANLAWGSRPL*MQCVSA
Trigger: TGCCGAAACACATTGCATTCATAATGGACGGGAACC...CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR TCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGCTTGTTGAAGCCCTGTaGGTGGCCTTCCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALLVEAL*VAFLPL
Trigger: GAGCGGCAGGAAGGCCACTCACAGGGCTTCAACAAG...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR TCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGCTTCCATCAAGCGGCTaGACTTCTGCCGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWLPSSG*TSAGPD
Trigger: ATCTGGCCCGGCAGAAGTTCAGCCGCTTGATGGAAG...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR TCA 90 bp TGGTTGGTGTTGCTGGCTGGTACTTGCCGGTGTGGGGCACCTGAAATAGAGTTGAACACCAGGCAGGAGTaGGAGGTCTGCCATAGCAAG +
Preference number: 4 (lower is better)
Translates to: WLVLLAGTCRCGAPEIELNTRQE*EVCHSK
Trigger: CTTGCTATGGCAGACCTCTCACTCCTGCCTGGTGTT...CAACTCTATTTCAGGTGCCCCACACCGGCAAGTACCAGCCAGCAACACCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR TCA 90 bp TGTATACTCTGGCCACAGAACGGGTTGGAACACCAGGCAGGAGTGAGAGGTCTGAACACCAGGCAGGAGTaGGAGGTCTGCCATAGCAAG +
Preference number: 4 (lower is better)
Translates to: CILWPQNGLEHQAGVRGLNTRQE*EVCHSK
Trigger: CTTGCTATGGCAGACCTCTCACTCCTGCCTGGTGTT...CAGACCTCTCACTCCTGCCTGGTGTTCCAACCCGTTCTGTGGCCAGAGTATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS-3UTR TCA 90 bp GGGCTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCAACACCAGGCAGGAGTaGGAGGTCTGCCATAGCAAG +
Preference number: 4 (lower is better)
Translates to: GLPSQAKGTPFIIRKGGANTRQE*EVCHSK
Trigger: CTTGCTATGGCAGACCTCTCACTCCTGCCTGGTGTT...GGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR TCA 90 bp ATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGCTCATAGGGGCCAGTCAGCTCGCTTaGGTTCCAAGGCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: ILRKVRPRRQDSTATLIGASQLA*VPRPAG
Trigger: TCCTGCAGGCCTTGGAACTCAAGCGAGCTGACTGGC...CCCTATGAGCGTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGCCAGTCAGCTCGCTTaGGTTCCAAGGCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALASQLA*VPRPAG
Trigger: TCCTGCAGGCCTTGGAACTCAAGCGAGCTGACTGGC...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR GCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGTGTGAGTGGCCTTCCTaGCGCTCCACCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALCEWPS*RSTWHF
Trigger: GAAGTGCCAGGTGGAGCGGCAGGAAGGCCACTCACA...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR GCA 90 bp AGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGCACACCCCATGCTTCTaGAGTTTCTCCTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RSLSQAAQRYLWPANLAWHTPCF*SFSFSS
Trigger: GGAAGAAAAGGAGAAACTGCAGAAGCATGGGGTGTG...CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp CCTCAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCACACCCCATGCTTCTaGAGTTTCTCCTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PQEPVPGSPKVSMASKPGHTPCF*SFSFSS
Trigger: GGAAGAAAAGGAGAAACTGCAGAAGCATGGGGTGTG...GCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp CCTCAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCGGATACACACCCCATaGTTCTGCAGTTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: PQEPVPGSPKVSMASKPGRIHTP*FCSFSF
Trigger: AAAGGAGAAACTGCAGAAGCATGGGGTGTGTATCCG...GCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp CTCAGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCTCCAAGGGCAACAAGTaGAGATCGCCCAGGACCCGG +
Preference number: 4 (lower is better)
Translates to: LRPKRDASPINHLYCTPISKGNK*RSPRTR
Trigger: CCGGGTCCTGGGCGATCTGCACTTGTTGCCCTTGGA...GATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp ATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCCCTCTTCCGCTCCTCTaGATACATGTCTCGGGCCTT +
Preference number: 4 (lower is better)
Translates to: MGALPKGSLIGFSIAVSGPLPLL*IHVSGL
Trigger: AAGGCCCGAGACATGTATGCAGAGGAGCGGAAGAGG...GCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp AGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTTCCCTCTCCAGCTGCTaGCTCTTCCGCTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RFSVLVGDFHPQSSSGACSLSSC*LFRSSA
Trigger: TGCAGAGGAGCGGAAGAGGCAGCAGCTGGAGAGGGA...ACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp ATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGCTCATAGGGCCCTCTCGCAGCAGCTaGTCTGTCACTGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ILRKVRPRRQDSTATLIGPSRSS*SVTVAW
Trigger: CCAGGCTACAGTGACAGAGCAGCTGCTGCGAGAGGG...CCCTATGAGCGTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGCCCTCTCGCAGCAGCTaGTCTGTCACTGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALPSRSS*SVTVAW
Trigger: CCAGGCTACAGTGACAGAGCAGCTGCTGCGAGAGGG...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR GCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGCTGGCCGAGAGTTTGTaGAAGCGTGTCCTTCGGAGC +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWLAESL*KRVLRS
Trigger: GCTCCGAAGGACACGCTTGCACAAACTCTCGGCCAG...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR GCA 90 bp AATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGGACAGAAAGGGGAAGAGGTTGAGTTCCAAGGCCTaGAGGAAGCCTTGGACTCGC +
Preference number: 4 (lower is better)
Translates to: NSQEVSCRQVSRDRKGKRLSSKA*RKPWTR
Trigger: GCGAGTCCAAGGCTTCCTGCAGGCCTTGGAACTCAA...CCTCTTCCCCTTTCTGTCCCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGTTCAGGCTGATGCAGTaGCCAGACGGGCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALFRLMQ*PDGPAS
Trigger: ACTGGCTGGCCCGTCTGGGCACTGCATCAGCCTGAA...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR GCA 90 bp TTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCCCTGGCCCCATGCCCTaGAAGAGGAGGAGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: FSVLVGDFHPQSSSGACPPGPMP*KRRRKA
Trigger: AGCTTTTCTCCTCCTCTTGCAGGGCATGGGGCCAGG...GGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp GGCTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTCCTGGCCCCATGCCCTaGAAGAGGAGGAGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: GSPAKQREHHSLSGKEVPPGPMP*KRRRKA
Trigger: AGCTTTTCTCCTCCTCTTGCAGGGCATGGGGCCAGG...AGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CCTCCAGCCCCTCATTCCCGCCTTAATTGTAGGGCTCTGCATTATAGCCGCATACCTGGCCCCATGCCCTaGAAGAGGAGGAGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: PPAPHSRLNCRALHYSRIPGPMP*KRRRKA
Trigger: AGCTTTTCTCCTCCTCTTGCAGGGCATGGGGCCAGG...TATGCGGCTATAATGCAGAGCCCTACAATTAAGGCGGGAATGAGGGGCTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp ATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGCTCATAGGGCATCTCCAGGAACCCTGTaGCAGGGATTGGTAGAGGGG +
Preference number: 4 (lower is better)
Translates to: ITESQTQETGLNSHAHRASPGTL*QGLVEG
Trigger: CCCCTCTACCAATCCCTGGCACAGGGTTCCTGGAGA...TGCCCTATGAGCGTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TGGTTGGTGTTGCTGGCTGGTACTTGCCGGTGTGGGGCACCTGAAATAGAGTTGAGGGCAGATTCCGTTTaGTGCCTCCAGCCCCTCATT +
Preference number: 4 (lower is better)
Translates to: WLVLLAGTCRCGAPEIELRADSV*CLQPLI
Trigger: AATGAGGGGCTGGAGGCAGCAAACGGAATCTGCCCT...CAACTCTATTTCAGGTGCCCCACACCGGCAAGTACCAGCCAGCAACACCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp AATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGGACAGAAAGGGGAAGAGGAGGGCAGATTCCGTTTaGTGCCTCCAGCCCCTCATT +
Preference number: 4 (lower is better)
Translates to: NSQEVSCRQVSRDRKGKRRADSV*CLQPLI
Trigger: AATGAGGGGCTGGAGGCAGCAAACGGAATCTGCCCT...CCTCTTCCCCTTTCTGTCCCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp AAGGCACTAATCCTCTCAGCAGCTCTGCAGCAAGTCCTGGCAGAGGGAGGTAAGAGGGCAGATTCCGTTTaGTGCCTCCAGCCCCTCATT +
Preference number: 4 (lower is better)
Translates to: KALILSAALQQVLAEGGKRADSV*CLQPLI
Trigger: AATGAGGGGCTGGAGGCAGCAAACGGAATCTGCCCT...CTTACCTCCCTCTGCCAGGACTTGCTGCAGAGCTGCTGAGAGGATTAGTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CATTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTTTTGCAGCCCTTGCTaGTGGGCGACGACGACGACC +
Preference number: 4 (lower is better)
Translates to: HYQERRCLSPRKGRGVEPFCSPC*WATTTT
Trigger: GGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAA...GGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp GGCTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTCTATTTTGCAGCCCTTaGTGCTGGGCGACGACGACG +
Preference number: 4 (lower is better)
Translates to: GSPAKQREHHSLSGKEVPLFCSP*CWATTT
Trigger: CGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAG...AGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCCTATTTTGCAGCCCTTaGTGCTGGGCGACGACGACG +
Preference number: 4 (lower is better)
Translates to: FSVLVGDFHPQSSSGACPLFCSP*CWATTT
Trigger: CGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAG...GGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGCCACCTGGCACTTCTTaGCATAGCGACGGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWPPGTS*HSDGSR
Trigger: ACGGGAACCGTCGCTATGCCAAGAAGTGCCAGGTGG...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGTTGAAGCCCTGTGAGTaGCCTTCCTGCCGCTCCACC +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALLKPCE*PSCRST
Trigger: GGTGGAGCGGCAGGAAGGCCACTCACAGGGCTTCAA...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CCA 90 bp CTCAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCACTCAGAGATATCACTaGGATCCAACAGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LRSLSQAAQRYLWPANLATQRYH*DPTGLA
Trigger: AGCAAGGCCTGTTGGATCCCAGTGATATCTCTGAGT...GGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR CCA 90 bp GGCTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTCTGTCACTGTAGCCTaGTCCCTCTCCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GSPAKQREHHSLSGKEVPSVTVA*SLSSCC
Trigger: GCAGCAGCTGGAGAGGGACCAGGCTACAGTGACAGA...AGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGTCTGTCACTGTAGCCTaGTCCCTCTCCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWSVTVA*SLSSCC
Trigger: GCAGCAGCTGGAGAGGGACCAGGCTACAGTGACAGA...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CCA 90 bp CCGCATAATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGTAAAGCTGCGTCCCCACTGGCTTaGAGCCCCTCTCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PHNSCLPNYGCQQPHCKAASPLA*SPSRSS
Trigger: GCTGCTGCGAGAGGGGCTCCAAGCCAGTGGGGACGC...AGCTTTACAATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATTATGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CCTGGCTTGCACAAATCACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGGCTGGGCGTCCCCACTaGCTTGGAGCCCCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: PGLHKSHLSKATTSSTILAGRPH*LGAPLA
Trigger: TGCGAGAGGGGCTCCAAGCCAGTGGGGACGCCCAGC...CAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTGATTTGTGCAAGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGCTCGCTCTTCCCGTCTaGCCGAGAGTTTGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWLALPV*PRVCAS
Trigger: GCTTGCACAAACTCTCGGCCAGACGGGAAGAGCGAG...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGCCTGCAGGAAGCCTTaGACTCGCTCTTCCCGTCTG +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALACRKP*TRSSRL
Trigger: CAGACGGGAAGAGCGAGTCCAAGGCTTCCTGCAGGC...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGGGCAAAGTGGCAGGTaGCCAGCCTCATTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALGQSGR*PASFRL
Trigger: CAGCCTGAATGAGGCTGGCCACCTGCCACTTTGCCC...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CCA 90 bp ATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCGCCCAAAGGTATCTATaGCCAGCAAACCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: MGALPKGSLIGFSIAVSGAQRYL*PANLAW
Trigger: CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGC...GCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CCAGGGCCTACAGGCCCTTCTGTTACCCTGAACCATGGAGGGGGCCAGTCTCATGGTGGAAGGCTAAAATaGAAGGGTAAAGAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: PGPTGPSVTLNHGGGQSHGGRLK*KGKELG
Trigger: CCCTAGCTCTTTACCCTTCCATTTTAGCCTTCCACC...ATGAGACTGGCCCCCTCCATGGTTCAGGGTAACAGAAGGGCCTGTAGGCCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp AGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGGGAGAAAAGCTTGTGTaGGCTGAGTCGACAATAGGT +
Preference number: 4 (lower is better)
Translates to: RSLSQAAQRYLWPANLAWGEKLV*AESTIG
Trigger: ACCTATTGTCGACTCAGCCCACACAAGCTTTTCTCC...CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTTCGGGGCCAGTCTCATTTaGGAGTGGAGCCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SPAKQREHHSLSGKEVPFGASLI*EWSLAP
Trigger: TGGGGCCAGGCTCCACTCCCAAATGAGACTGGCCCC...GAAAGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp AATCGCCCGCCTGGCTTCCGCGCACCATTGGGGGTGCTGAGTCTTTCAGTGAGCAGAAACCTCGAAGAGTaGAGTGGGAATCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: NRPPGFRAPLGVLSLSVSRNLEE*SGNQSL
Trigger: CAAACTCTGATTCCCACTCCACTCTTCGAGGTTTCT...GCTCACTGAAAGACTCAGCACCCCCAATGGTGCGCGGAAGCCAGGCGGGCGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGTTGGTGTTGCTGGCTaGTACTTGCCGGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALVGVAG*YLPVWG
Trigger: GCCCCACACCGGCAAGTACCAGCCAGCAACACCAAC...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp AGGGAGCCAGGTCAAAAAGCTGAGAGAAACCTCGAAGAGTGGAGTGGGAATCAGGGGGAGTGCCAGGTGTaGATGGGGGCTTTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: REPGQKAERNLEEWSGNQGECQV*MGALPK
Trigger: CTTTGGCAAAGCCCCCATCCACACCTGGCACTCCCC...CTGATTCCCACTCCACTCTTCGAGGTTTCTCTCAGCTTTTTGACCTGGCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CCTCCAGCCCCTCATTCCCGCCTTAATTGTAGGGCTCTGCATTATAGCCGCATACACTACATCGCCTCCTaGGGCAGCTTCTCCCTACTC +
Preference number: 4 (lower is better)
Translates to: PPAPHSRLNCRALHYSRIHYIAS*GSFSLL
Trigger: GAGTAGGGAGAAGCTGCCCCAGGAGGCGATGTAGTG...TATGCGGCTATAATGCAGAGCCCTACAATTAAGGCGGGAATGAGGGGCTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp ACCTCTCTGCCTCTTCTTTCCACCACTACATCGCCTCCTGGGGCAGCTTCTCCCATAGATGTCCTCAAATaGGGGCTTGGCTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: TSLPLLSTTTSPPGAASPIDVLK*GLGSQV
Trigger: CACCTGTGAGCCAAGCCCCCATTTGAGGACATCTAT...GGGAGAAGCTGCCCCAGGAGGCGATGTAGTGGTGGAAAGAAGAGGCAGAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp ACCTCTGGCCAAGTACATGGCACAGAGGGGCTTTATGGTTTGGTACAGGCCTGCCTGGTCTTGAACTCCTaGCCTGCCTCAAGTGGACTG +
Preference number: 4 (lower is better)
Translates to: TSGQVHGTEGLYGLVQACLVLNS*PASSGL
Trigger: CAGTCCACTTGAGGCAGGCCAGGAGTTCAAGACCAG...GCAGGCCTGTACCAAACCATAAAGCCCCTCTGTGCCATGTACTTGGCCAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374185.7
3UTR CAA 72 bp TTGGATTGTAATCGCCCGCCTGGCTTCCGCGCACCATaGGGGGTGCTGAGTCTTTCAGTGAGCAATCAGTAC +
Preference number: 4 (lower is better)
Translates to: LDCNRPPGFRAP*GVLSLSVSNQY
Trigger: GTACTGATTGCTCACTGAAAGACTCAGCACCCCCAATGGTGCGCGGAAGCCAGGCGGGCGATTACAATCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CAA 72 bp ATTGGTAGAGGGGAGTGCCAGGTGTGGATGGGGGCTTaGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCC +
Preference number: 4 (lower is better)
Translates to: IGRGECQVWMGA*PKGSLIGFSIA
Trigger: GGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATCCACACCTGGCACTCCCCTCTACCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CAA 72 bp TCCAAAGCAACCACGAGTTCTACTATTTTGCAGCCCTaGCTGCTGGGCGACGACGACGACCTCTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SKATTSSTILQP*LLGDDDDLSAS
Trigger: AGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCGTGGTTGCTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp TACCCCAATCATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACACCAGCCAGGTAATCTaGTTAGCTCCGCTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: YPNHITESQTQETGLNSHTSQVI*LAPLGA
Trigger: CGCGCCCAGCGGAGCTAATCAGATTACCTGGCTGGT...GTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATATGATTGGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR TCA 90 bp TGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGGGAGCATGGACAACCAGCCAGGTAATCTaGTTAGCTCCGCTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: WLLNRRVWHLCLILGAWTTSQVI*LAPLGA
Trigger: CGCGCCCAGCGGAGCTAATCAGATTACCTGGCTGGT...TGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR TCA 90 bp CTCTTCAAAGGCACTAATCCTCTCAGCAGCTCTGCAGCAAGTCCTGGCAGAGGGTCTCAGCTAGCTTGTTaGAGCCCTGTGAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LFKGTNPLSSSAASPGRGSQLAC*SPVSGL
Trigger: AAGGCCACTCACAGGGCTTCAACAAGCTAGCTGAGA...CCCTCTGCCAGGACTTGCTGCAGAGCTGCTGAGAGGATTAGTGCCTTTGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236342.12
ENST00000360009.6
CDS-3UTR TCA 90 bp ACCTCTGGCCAAGTACATGGCACAGAGGGGCTTTATGGTTTGGTACAGGCCTGCTCTCAGCTAGCTTGTTaGAGCCCTGTGAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: TSGQVHGTEGLYGLVQACSQLAC*SPVSGL
Trigger: AAGGCCACTCACAGGGCTTCAACAAGCTAGCTGAGA...GCAGGCCTGTACCAAACCATAAAGCCCCTCTGTGCCATGTACTTGGCCAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR TCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGCTTCCATCAAGCGGCTaGACTTCTGCCGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALLPSSG*TSAGPD
Trigger: ATCTGGCCCGGCAGAAGTTCAGCCGCTTGATGGAAG...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR TCA 90 bp CATTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCCTTCCATCAAGCGGCTaGACTTCTGCCGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: HYQERRCLSPRKGRGVEPLPSSG*TSAGPD
Trigger: ATCTGGCCCGGCAGAAGTTCAGCCGCTTGATGGAAG...GGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGAAGCGGCTGAACTTCTaGCGGGCCAGATCCATAAGC +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWKRLNF*RARSIS
Trigger: GCTTATGGATCTGGCCCGGCAGAAGTTCAGCCGCTT...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR GCA 90 bp TTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGCCTCTTCTTTCCACGGATACACACCCCATaGTTCTGCAGTTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: FAALAAGRRRRPLCLFFPRIHTP*FCSFSF
Trigger: AAAGGAGAAACTGCAGAAGCATGGGGTGTGTATCCG...TGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TCTGGAACTGCAGGATGGCCTCGAAGAGGTTCCAAAATGTATACTCTGGCCACATCCAAGGGCAACAAGTaGAGATCGCCCAGGACCCGG +
Preference number: 4 (lower is better)
Translates to: SGTAGWPRRGSKMYTLATSKGNK*RSPRTR
Trigger: CCGGGTCCTGGGCGATCTGCACTTGTTGCCCTTGGA...TGTGGCCAGAGTATACATTTTGGAACCTCTTCGAGGCCATCCTGCAGTTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS-3UTR GCA 90 bp ACCTCTGGCCAAGTACATGGCACAGAGGGGCTTTATGGTTTGGTACAGGCCTGCGGCCTGTACAGCTTGTaGAATCAGCTCCTGGAGATC +
Preference number: 4 (lower is better)
Translates to: TSGQVHGTEGLYGLVQACGLYSL*NQLLEI
Trigger: GATCTCCAGGAGCTGATTGCACAAGCTGTACAGGCC...GCAGGCCTGTACCAAACCATAAAGCCCCTCTGTGCCATGTACTTGGCCAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR GCA 90 bp TGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGGGAGCATGGACATCCCTCTCCAGCTGCTaGCTCTTCCGCTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: WLLNRRVWHLCLILGAWTSLSSC*LFRSSA
Trigger: TGCAGAGGAGCGGAAGAGGCAGCAGCTGGAGAGGGA...TGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTTCTCCCTCTCCAGCTGCTaGCTCTTCCGCTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SPAKQREHHSLSGKEVPFSLSSC*LFRSSA
Trigger: TGCAGAGGAGCGGAAGAGGCAGCAGCTGGAGAGGGA...GAAAGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp AGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCTGGCCGAGAGTTTGTaGAAGCGTGTCCTTCGGAGC +
Preference number: 4 (lower is better)
Translates to: RFSVLVGDFHPQSSSGACLAESL*KRVLRS
Trigger: GCTCCGAAGGACACGCTTGCACAAACTCTCGGCCAG...ACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp ATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGCTCATAGGGCATTGAGTTCCAAGGCCTaGAGGAAGCCTTGGACTCGC +
Preference number: 4 (lower is better)
Translates to: ITESQTQETGLNSHAHRALSSKA*RKPWTR
Trigger: GCGAGTCCAAGGCTTCCTGCAGGCCTTGGAACTCAA...TGCCCTATGAGCGTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CTCAGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCTTGCTGGCTGGTACTTaGCGGTGTGGGGCACCTGAA +
Preference number: 4 (lower is better)
Translates to: LRPKRDASPINHLYCTPILLAGT*RCGAPE
Trigger: TTCAGGTGCCCCACACCGGCAAGTACCAGCCAGCAA...GATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGTTGCTGGCTGGTACTTaGCGGTGTGGGGCACCTGAA +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALLLAGT*RCGAPE
Trigger: TTCAGGTGCCCCACACCGGCAAGTACCAGCCAGCAA...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp ATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGCTCATAGGGTTGCTGGCTGGTACTTaGCGGTGTGGGGCACCTGAA +
Preference number: 4 (lower is better)
Translates to: ILRKVRPRRQDSTATLIGLLAGT*RCGAPE
Trigger: TTCAGGTGCCCCACACCGGCAAGTACCAGCCAGCAA...CCCTATGAGCGTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TGGTTGGTGTTGCTGGCTGGTACTTGCCGGTGTGGGGCACCTGAAATAGAGTTGGCATTTGGTTGGTGTTaGTGGCTGGTACTTGCCGGT +
Preference number: 4 (lower is better)
Translates to: WLVLLAGTCRCGAPEIELAFGWC*WLVLAG
Trigger: ACCGGCAAGTACCAGCCAGCAACACCAACCAAATGC...CAACTCTATTTCAGGTGCCCCACACCGGCAAGTACCAGCCAGCAACACCAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp AGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTAGCCAAGAAGTCTCTTaGCGCCAGGTATCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: RFSVLVGDFHPQSSSGACSQEVS*RQVSRD
Trigger: GTCCCGGGATACCTGGCGGCAAGAGACTTCTTGGCT...ACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CTCAGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCATTGGTAGAGGGGAGTaGCAGGTGTGGATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LRPKRDASPINHLYCTPIIGRGE*QVWMGA
Trigger: AGCCCCCATCCACACCTGGCACTCCCCTCTACCAAT...GATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp GAAGAAGTGTTTGGTTCTGCTCAGTCCTGTTGTGTTACAGGGGAGGCCTGTGCTTCTCCAGGAACCCTGTaGCAGGGATTGGTAGAGGGG +
Preference number: 4 (lower is better)
Translates to: EEVFGSAQSCCVTGEACASPGTL*QGLVEG
Trigger: CCCCTCTACCAATCCCTGGCACAGGGTTCCTGGAGA...AGCACAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAACCAAACACTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CTCAGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCGCAGATTCCGTTTGCTaGCTCCAGCCCCTCATTCCC +
Preference number: 4 (lower is better)
Translates to: LRPKRDASPINHLYCTPIADSVC*LQPLIP
Trigger: GGGAATGAGGGGCTGGAGGCAGCAAACGGAATCTGC...GATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp GATTCTGGGAGCATGGACAATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGCGACGACGACCTCTCTaGCTCTTCTTTCCACCACTA +
Preference number: 4 (lower is better)
Translates to: DSGSMDNSQEVSCRQVSRRRRPL*LFFPPL
Trigger: TAGTGGTGGAAAGAAGAGGCAGAGAGGTCGTCGTCG...CCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATTGTCCATGCTCCCAGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp GAAGAAGTGTTTGGTTCTGCTCAGTCCTGTTGTGTTACAGGGGAGGCCTGTGCTCTATTTTGCAGCCCTTaGTGCTGGGCGACGACGACG +
Preference number: 4 (lower is better)
Translates to: EEVFGSAQSCCVTGEACALFCSP*CWATTT
Trigger: CGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAG...AGCACAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAACCAAACACTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp ATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGCTCATAGGGCTATTTTGCAGCCCTTaGTGCTGGGCGACGACGACG +
Preference number: 4 (lower is better)
Translates to: ILRKVRPRRQDSTATLIGLFCSP*CWATTT
Trigger: CGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAG...CCCTATGAGCGTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp GATTCTGGGAGCATGGACAATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGCGAGTTCTACTATTTTaGAGCCCTTGCTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: DSGSMDNSQEVSCRQVSRRVLLF*SPCCWA
Trigger: CGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCG...CCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATTGTCCATGCTCCCAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp GGTGTGGATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTTCTCGGGCCTTCTGCTaGCATAGCAAGAAGTCACTC +
Preference number: 4 (lower is better)
Translates to: GVDGGFAKGFTDWLLNRRSRAFC*HSKKSL
Trigger: GAGTGACTTCTTGCTATGGCAGCAGAAGGCCCGAGA...ACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATCCACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431933.5
CDS-3UTR CCA 90 bp CTCAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCGATGAGGAGAGCGGTTaGTATAGAGGCACTTATCAA +
Preference number: 4 (lower is better)
Translates to: LRSLSQAAQRYLWPANLADEESG*YRGTYQ
Trigger: TTGATAAGTGCCTCTATACCAACCGCTCTCCTCATC...GGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp CATTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTCTGTCACTGTAGCCTaGTCCCTCTCCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HYQERRCLSPRKGRGVEPSVTVA*SLSSCC
Trigger: GCAGCAGCTGGAGAGGGACCAGGCTACAGTGACAGA...GGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp CTCAGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCCTCGCTCTTCCCGTCTaGCCGAGAGTTTGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: LRPKRDASPINHLYCTPILALPV*PRVCAS
Trigger: GCTTGCACAAACTCTCGGCCAGACGGGAAGAGCGAG...GATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TGGCCCTTTGCTCTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCGCCTGCAGGAAGCCTTaGACTCGCTCTTCCCGTCTG +
Preference number: 4 (lower is better)
Translates to: WPFALQTLLVTRPRFSVLACRKP*TRSSRL
Trigger: CAGACGGGAAGAGCGAGTCCAAGGCTTCCTGCAGGC...GAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAGAGCAAAGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TTGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCGGGCAAAGTGGCAGGTaGCCAGCCTCATTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LVTRPRFSVLVGDFHPQSGQSGR*PASFRL
Trigger: CAGCCTGAATGAGGCTGGCCACCTGCCACTTTGCCC...GGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTTGGGCAAAGTGGCAGGTaGCCAGCCTCATTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LPSQAKGTPFIIRKGGAFGQSGR*PASFRL
Trigger: CAGCCTGAATGAGGCTGGCCACCTGCCACTTTGCCC...AAAGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp GGCTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTGCCCAAAGGTATCTATaGCCAGCAAACCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GSPAKQREHHSLSGKEVPAQRYL*PANLAW
Trigger: CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGC...AGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp ACCTCTCTGCCTCTTCTTTCCACCACTACATCGCCTCCTGGGGCAGCTTCTCCCGCAATCAGTACTGTGTaGTGGGAGAGGGTAGAGATT +
Preference number: 4 (lower is better)
Translates to: TSLPLLSTTTSPPGAASPAISTV*WERVEI
Trigger: AATCTCTACCCTCTCCCACCACACAGTACTGATTGC...GGGAGAAGCTGCCCCAGGAGGCGATGTAGTGGTGGAAAGAAGAGGCAGAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TACCCCAATCATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACAGGGGAGGCCTGTGCTaGATTCAGTTCACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: YPNHITESQTQETGLNSHRGGLC*IQFTRA
Trigger: GGCCCTGGTGAACTGAATCCAGCACAGGCCTCCCCT...GTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATATGATTGGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp ACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCAGGCAGCCCTCAATCGCCGTGTCTaGCATTTATGCTTGATTCTG +
Preference number: 4 (lower is better)
Translates to: TRGRLSPSILLRSLSQAALNRRV*HLCLIL
Trigger: CAGAATCAAGCATAAATGCCAGACACGGCGATTGAG...GGCTGCCTGGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp GGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGACCAGCCAGGTAATCTaGTTAGCTCCGCTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: GFTDWLLNRRVWHLCLILTSQVI*LAPLGA
Trigger: CGCGCCCAGCGGAGCTAATCAGATTACCTGGCTGGT...CAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR TCA 90 bp GGCTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTGAACCGCTCCCAAAGTaGCAGCTCTCCTTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: GSPAKQREHHSLSGKEVPEPLPK*QLSFLD
Trigger: ATCAAGGAAGGAGAGCTGTCACTTTGGGAGCGGTTC...AGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR TCA 90 bp CCTCCAGCCCCTCATTCCCGCCTTAATTGTAGGGCTCTGCATTATAGCCGCATATTGGGCCTGCCTTTATaGTGTTGGCACAGAACCGCT +
Preference number: 4 (lower is better)
Translates to: PPAPHSRLNCRALHYSRILGLPL*CWHRTA
Trigger: AGCGGTTCTGTGCCAACATCATAAAGGCAGGCCCAA...TATGCGGCTATAATGCAGAGCCCTACAATTAAGGCGGGAATGAGGGGCTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR TCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGTTGGGCCTGCCTTTATaGTGTTGGCACAGAACCGCT +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWLGLPL*CWHRTA
Trigger: AGCGGTTCTGTGCCAACATCATAAAGGCAGGCCCAA...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR TCA 90 bp CTATTGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAACTTGTTGAAGCCCTGTaGGTGGCCTTCCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: LLVTRPRFSVLVGDFHPQLVEAL*VAFLPL
Trigger: GAGCGGCAGGAAGGCCACTCACAGGGCTTCAACAAG...TTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR TCA 90 bp CCATTCATTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGCTTGTTGAAGCCCTGTaGGTGGCCTTCCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: PFIIRKGGAFHQEKEGEWLVEAL*VAFLPL
Trigger: GAGCGGCAGGAAGGCCACTCACAGGGCTTCAACAAG...CCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAATGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR TCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGTCTCAGCTAGCTTGTTaGAGCCCTGTGAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWSQLAC*SPVSGL
Trigger: AAGGCCACTCACAGGGCTTCAACAAGCTAGCTGAGA...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR TCA 90 bp ATGTCCTCAAATGGGGGCTTGGCTCACAGGTGGAAGGACACTAAATTGGTCCCAAACACCAGGCAGGAGTaGGAGGTCTGCCATAGCAAG +
Preference number: 4 (lower is better)
Translates to: MSSNGGLAHRWKDTKLVPNTRQE*EVCHSK
Trigger: CTTGCTATGGCAGACCTCTCACTCCTGCCTGGTGTT...TGGGACCAATTTAGTGTCCTTCCACCTGTGAGCCAAGCCCCCATTTGAGGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR TCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGAACACCAGGCAGGAGTaGGAGGTCTGCCATAGCAAG +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALNTRQE*EVCHSK
Trigger: CTTGCTATGGCAGACCTCTCACTCCTGCCTGGTGTT...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR TCA 90 bp AGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCATAGCCCTTCTGTTACCCTaGACCATGGAGGGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: RPKRDASPINHLYCTPIIALLLP*TMEGAS
Trigger: ACTGGCCCCCTCCATGGTTCAGGGTAACAGAAGGGC...TATGATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp AGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTGTGGGAATCAGAGTTTaGGATGGTGAGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RFSVLVGDFHPQSSSGACVGIRV*DGEGRE
Trigger: CTCCCTGCCCTCACCATCTCAAACTCTGATTCCCAC...ACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp AGATCCATAAGCCCGTCTACCTCACTCTTGGAGCGTTTGAAGTTCTCAATGCTGCACCACCGCAGAGTCTaGGAGGGGAGAAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: RSISPSTSLLERLKFSMLHHRRV*EGRRQG
Trigger: TCCTTGCCTTCTCCCCTCTCAGACTCTGCGGTGGTG...CAGCATTGAGAACTTCAAACGCTCCAAGAGTGAGGTAGACGGGCTTATGGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS-3UTR GCA 90 bp GACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGAAGCGGCTGAACTTCTaGCGGGCCAGATCCATAAGC +
Preference number: 4 (lower is better)
Translates to: DLGLVYSWETFTLNPPQEKRLNF*RARSIS
Trigger: GCTTATGGATCTGGCCCGGCAGAAGTTCAGCCGCTT...CTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCTAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp GAAGAAGTGTTTGGTTCTGCTCAGTCCTGTTGTGTTACAGGGGAGGCCTGTGCTAAGCGGCTGAACTTCTaGCGGGCCAGATCCATAAGC +
Preference number: 4 (lower is better)
Translates to: EEVFGSAQSCCVTGEACAKRLNF*RARSIS
Trigger: GCTTATGGATCTGGCCCGGCAGAAGTTCAGCCGCTT...AGCACAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAACCAAACACTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR GCA 90 bp GAAGAAGTGTTTGGTTCTGCTCAGTCCTGTTGTGTTACAGGGGAGGCCTGTGCTCCTCTTCCGCTCCTCTaGATACATGTCTCGGGCCTT +
Preference number: 4 (lower is better)
Translates to: EEVFGSAQSCCVTGEACAPLPLL*IHVSGL
Trigger: AAGGCCCGAGACATGTATGCAGAGGAGCGGAAGAGG...AGCACAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAACCAAACACTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGCCTCTTCCGCTCCTCTaGATACATGTCTCGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALPLPLL*IHVSGL
Trigger: AAGGCCCGAGACATGTATGCAGAGGAGCGGAAGAGG...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR GCA 90 bp CTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTTCCCTCTCCAGCTGCTaGCTCTTCCGCTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LQTLLVTRPRFSVLVGDFSLSSC*LFRSSA
Trigger: TGCAGAGGAGCGGAAGAGGCAGCAGCTGGAGAGGGA...AAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TGGCCCTTTGCTCTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCCTGGCCGAGAGTTTGTaGAAGCGTGTCCTTCGGAGC +
Preference number: 4 (lower is better)
Translates to: WPFALQTLLVTRPRFSVLLAESL*KRVLRS
Trigger: GCTCCGAAGGACACGCTTGCACAAACTCTCGGCCAG...GAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAGAGCAAAGGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGTTGAGTTCCAAGGCCTaGAGGAAGCCTTGGACTCGC +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALLSSKA*RKPWTR
Trigger: GCGAGTCCAAGGCTTCCTGCAGGCCTTGGAACTCAA...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR GCA 90 bp CTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTTTCAGGCTGATGCAGTaGCCAGACGGGCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LQTLLVTRPRFSVLVGDFFRLMQ*PDGPAS
Trigger: ACTGGCTGGCCCGTCTGGGCACTGCATCAGCCTGAA...AAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CTCAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTATCAGGAAAGGAGGTaGCTTTCACCAAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: LRSLSQAAQRYLWPANLAYQERR*LSPRKG
Trigger: TCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA...GGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp GCTTTGACCCTCACAAGCAGAGGACCTAGAACAAGCTTTGCCATGCCAAGAATATGGAGCCTGGCCCCATaGCCTGCAAGAGGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: ALTLTSRGPRTSFAMPRIWSLAP*PARGGE
Trigger: TTCTCCTCCTCTTGCAGGGCATGGGGCCAGGCTCCA...TATTCTTGGCATGGCAAAGCTTGTTCTAGGTCCTCTGCTTGTGAGGGTCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TGGCCCTTTGCTCTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCTCCTCTCAGCAGCTCTaGAGCAAGTCCTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: WPFALQTLLVTRPRFSVLSSQQL*SKSWQR
Trigger: CCTCTGCCAGGACTTGCTGCAGAGCTGCTGAGAGGA...GAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAGAGCAAAGGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CCTGCAAGAGGAGGAGAAAAGCTTGTGTGGGCTGAGTCGACAATAGGTAATTGGTCCTCTCAGCAGCTCTaGAGCAAGTCCTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PARGGEKLVWAESTIGNWSSQQL*SKSWQR
Trigger: CCTCTGCCAGGACTTGCTGCAGAGCTGCTGAGAGGA...CCAATTACCTATTGTCGACTCAGCCCACACAAGCTTTTCTCCTCCTCTTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CCTCCAGCCCCTCATTCCCGCCTTAATTGTAGGGCTCTGCATTATAGCCGCATAGCATTTGGTTGGTGTTaGTGGCTGGTACTTGCCGGT +
Preference number: 4 (lower is better)
Translates to: PPAPHSRLNCRALHYSRIAFGWC*WLVLAG
Trigger: ACCGGCAAGTACCAGCCAGCAACACCAACCAAATGC...TATGCGGCTATAATGCAGAGCCCTACAATTAAGGCGGGAATGAGGGGCTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGGGAGCATGGACAATTGGTAGAGGGGAGTaGCAGGTGTGGATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: WLLNRRVWHLCLILGAWTIGRGE*QVWMGA
Trigger: AGCCCCCATCCACACCTGGCACTCCCCTCTACCAAT...TGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp GATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGAAAATGTACAGCACCTaGTCTCCAGGAACCCTGTGC +
Preference number: 4 (lower is better)
Translates to: DGGFAKGFTDWLLNRRVWKMYST*SPGTLC
Trigger: GCACAGGGTTCCTGGAGAGCAGGTGCTGTACATTTT...CCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTTTTTGCAGCCCTTGCTaGTGGGCGACGACGACGACC +
Preference number: 4 (lower is better)
Translates to: LQTLLVTRPRFSVLVGDFFCSPC*WATTTT
Trigger: GGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAA...AAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp ACCTCTGGCCAAGTACATGGCACAGAGGGGCTTTATGGTTTGGTACAGGCCTGCTGTGCAATCAGCTCCTaGAGATCCAAGGGCAACAAG +
Preference number: 4 (lower is better)
Translates to: TSGQVHGTEGLYGLVQACCAISS*RSKGNK
Trigger: CTTGTTGCCCTTGGATCTCCAGGAGCTGATTGCACA...GCAGGCCTGTACCAAACCATAAAGCCCCTCTGTGCCATGTACTTGGCCAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR CCA 90 bp ACCTCTCTGCCTCTTCTTTCCACCACTACATCGCCTCCTGGGGCAGCTTCTCCCCCAAAATGTATACTCTaGCCACAGAACGGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: TSLPLLSTTTSPPGAASPPKCIL*PQNGLE
Trigger: TTCCAACCCGTTCTGTGGCCAGAGTATACATTTTGG...GGGAGAAGCTGCCCCAGGAGGCGATGTAGTGGTGGAAAGAAGAGGCAGAGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR CCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGACGCTATGGTTCATCTaGAACTGCAGGATGGCCTCG +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWTLWFI*NCRMAS
Trigger: CGAGGCCATCCTGCAGTTCCAGATGAACCATAGCGT...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CCA 90 bp TCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTTCTCTGTCACTGTAGCCTaGTCCCTCTCCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SPAKQREHHSLSGKEVPFSVTVA*SLSSCC
Trigger: GCAGCAGCTGGAGAGGGACCAGGCTACAGTGACAGA...GAAAGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp GCTTTGACCCTCACAAGCAGAGGACCTAGAACAAGCTTTGCCATGCCAAGAATAGGGCAAAGTGGCAGGTaGCCAGCCTCATTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ALTLTSRGPRTSFAMPRIGQSGR*PASFRL
Trigger: CAGCCTGAATGAGGCTGGCCACCTGCCACTTTGCCC...TATTCTTGGCATGGCAAAGCTTGTTCTAGGTCCTCTGCTTGTGAGGGTCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp ACCTCTCTGCCTCTTCTTTCCACCACTACATCGCCTCCTGGGGCAGCTTCTCCCAAAGAGCTAGGGTTTTaGGGAGAACTCTTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: TSLPLLSTTTSPPGAASPKELGF*GELFPE
Trigger: TTCAGGGAAGAGTTCTCCCCAAAACCCTAGCTCTTT...GGGAGAAGCTGCCCCAGGAGGCGATGTAGTGGTGGAAAGAAGAGGCAGAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCAGGCAGGAGAAAAGCTTGTGTaGGCTGAGTCGACAATAGGT +
Preference number: 4 (lower is better)
Translates to: CTRGRLSPSILLRSLSQAGEKLV*AESTIG
Trigger: ACCTATTGTCGACTCAGCCCACACAAGCTTTTCTCC...TGCCTGGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp AATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGGACAGAAAGGGGAAGAGGTGTTACCCTGAACCATaGAGGGGGCCAGTCTCATTT +
Preference number: 4 (lower is better)
Translates to: NSQEVSCRQVSRDRKGKRCYPEP*RGPVSF
Trigger: AAATGAGACTGGCCCCCTCCATGGTTCAGGGTAACA...CCTCTTCCCCTTTCTGTCCCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GATTCTGGGAGCATGGACAATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGTGTTACCCTGAACCATaGAGGGGGCCAGTCTCATTT +
Preference number: 4 (lower is better)
Translates to: DSGSMDNSQEVSCRQVSRCYPEP*RGPVSF
Trigger: AAATGAGACTGGCCCCCTCCATGGTTCAGGGTAACA...CCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATTGTCCATGCTCCCAGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGGTTGGTGTTGCTGGCTaGTACTTGCCGGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GFTDWLLNRRVWHLCLILVGVAG*YLPVWG
Trigger: GCCCCACACCGGCAAGTACCAGCCAGCAACACCAAC...CAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGCCTCTTCTTTCCATTGCAGAAAGTAAAATaGGAAGTCTGGCATGGTGGC +
Preference number: 4 (lower is better)
Translates to: FAALAAGRRRRPLCLFFPLQKVK*EVWHGG
Trigger: GCCACCATGCCAGACTTCCCATTTTACTTTCTGCAA...TGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGAGGGGAAGAGGCGGGTaGGGTATAGGAAAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALRGRGG*GIGKLG
Trigger: CCCTAACTTTCCTATACCCCACCCGCCTCTTCCCCT...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp ACCTGCTCTCCAGGAACCCTGTGCCAGGGATTGGTAGAGGGGAGTGCCAGGTGTTTGATTCTGGGAGCATaGACAATAGCCAAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: TCSPGTLCQGLVEGSARCLILGA*TIAKKS
Trigger: AGACTTCTTGGCTATTGTCCATGCTCCCAGAATCAA...ACACCTGGCACTCCCCTCTACCAATCCCTGGCACAGGGTTCCTGGAGAGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCAGGCAAAAGGGTTCACTGATTaGCTTCTCAATCGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: CTRGRLSPSILLRSLSQAKGFTD*LLNRRV
Trigger: GACACGGCGATTGAGAAGCCAATCAGTGAACCCTTT...TGCCTGGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TGGCCCTTTGCTCTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCCACTACATCGCCTCCTaGGGCAGCTTCTCCCTACTC +
Preference number: 4 (lower is better)
Translates to: WPFALQTLLVTRPRFSVLHYIAS*GSFSLL
Trigger: GAGTAGGGAGAAGCTGCCCCAGGAGGCGATGTAGTG...GAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAGAGCAAAGGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CTCTTCAAAGGCACTAATCCTCTCAGCAGCTCTGCAGCAAGTCCTGGCAGAGGGGGCTTGGCTCACAGGTaGAAGGACACTAAATTGGTC +
Preference number: 4 (lower is better)
Translates to: LFKGTNPLSSSAASPGRGGLAHR*KDTKLV
Trigger: GACCAATTTAGTGTCCTTCCACCTGTGAGCCAAGCC...CCCTCTGCCAGGACTTGCTGCAGAGCTGCTGAGAGGATTAGTGCCTTTGAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp ATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGCTCATAGGGCCTCAAATGGGGGCTTaGCTCACAGGTGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: ILRKVRPRRQDSTATLIGPQMGA*LTGGRT
Trigger: TGTCCTTCCACCTGTGAGCCAAGCCCCCATTTGAGG...CCCTATGAGCGTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp AGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCTCAAATGGGGGCTTaGCTCACAGGTGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: RFSVLVGDFHPQSSSGACPQMGA*LTGGRT
Trigger: TGTCCTTCCACCTGTGAGCCAAGCCCCCATTTGAGG...ACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp ACCTCTGGCCAAGTACATGGCACAGAGGGGCTTTATGGTTTGGTACAGGCCTGCCACAGAGGGGCTTTATaGTTTGGTACAGGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: TSGQVHGTEGLYGLVQACHRGAL*FGTGLL
Trigger: AAGCAGGCCTGTACCAAACCATAAAGCCCCTCTGTG...GCAGGCCTGTACCAAACCATAAAGCCCCTCTGTGCCATGTACTTGGCCAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR TCA 90 bp CATTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCGAACCGCTCCCAAAGTaGCAGCTCTCCTTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: HYQERRCLSPRKGRGVEPEPLPK*QLSFLD
Trigger: ATCAAGGAAGGAGAGCTGTCACTTTGGGAGCGGTTC...GGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR TCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGAACCGCTCCCAAAGTaGCAGCTCTCCTTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALEPLPK*QLSFLD
Trigger: ATCAAGGAAGGAGAGCTGTCACTTTGGGAGCGGTTC...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR TCA 90 bp GACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGTTGGGCCTGCCTTTATaGTGTTGGCACAGAACCGCT +
Preference number: 4 (lower is better)
Translates to: DLGLVYSWETFTLNPPQELGLPL*CWHRTA
Trigger: AGCGGTTCTGTGCCAACATCATAAAGGCAGGCCCAA...CTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCTAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR TCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGTCTCAGCTAGCTTGTTaGAGCCCTGTGAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALSQLAC*SPVSGL
Trigger: AAGGCCACTCACAGGGCTTCAACAAGCTAGCTGAGA...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR TCA 90 bp GCTTTGACCCTCACAAGCAGAGGACCTAGAACAAGCTTTGCCATGCCAAGAATACTTCCATCAAGCGGCTaGACTTCTGCCGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: ALTLTSRGPRTSFAMPRILPSSG*TSAGPD
Trigger: ATCTGGCCCGGCAGAAGTTCAGCCGCTTGATGGAAG...TATTCTTGGCATGGCAAAGCTTGTTCTAGGTCCTCTGCTTGTGAGGGTCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR TCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGCTCTCACAGCATTGCTaGTCTCATGACGGGATGTGT +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWLSQHC*SHDGMC
Trigger: ACACATCCCGTCATGAGATCAGCAATGCTGTGAGAG...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000526219.5
CDS-3UTR TCA 90 bp GATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGTCCAAACCCTATTGGTaGCCAGACCTAGGTTTAGTG +
Preference number: 4 (lower is better)
Translates to: DGGFAKGFTDWLLNRRVWSKPYW*PDLGLV
Trigger: CACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGA...CCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp GACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGTGCCAAAGGGTTCACTaGTTGGCTTCTCAATCGCCG +
Preference number: 4 (lower is better)
Translates to: DLGLVYSWETFTLNPPQECQRVH*LASQSP
Trigger: CGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCA...CTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCTAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp CTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTTGCTCAGCTAGCTTGTTaGAGCCCTGTGAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LPSQAKGTPFIIRKGGAFAQLAC*SPVSGL
Trigger: AAGGCCACTCACAGGGCTTCAACAAGCTAGCTGAGC...AAAGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS-3UTR GCA 90 bp GGGGTTTCTTGGTGTGTGGTGAACTCTAGTTCTGAAGCAGGTTGTAATAAGCCATGTGAGTGGCCTTCCTaGCGCTCCACCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: GVSWCVVNSSSEAGCNKPCEWPS*RSTWHF
Trigger: GAAGTGCCAGGTGGAGCGGCAGGAAGGCCACTCACA...TGGCTTATTACAACCTGCTTCAGAACTAGAGTTCACCACACACCAAGAAACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR GCA 90 bp CCTGGCTTGCACAAATCACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGTGTGAGTGGCCTTCCTaGCGCTCCACCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: PGLHKSHLSKATTSSTILCEWPS*RSTWHF
Trigger: GAAGTGCCAGGTGGAGCGGCAGGAAGGCCACTCACA...CAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTGATTTGTGCAAGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR GCA 90 bp TGGTTGGTGTTGCTGGCTGGTACTTGCCGGTGTGGGGCACCTGAAATAGAGTTGCACACCCCATGCTTCTaGAGTTTCTCCTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: WLVLLAGTCRCGAPEIELHTPCF*SFSFSS
Trigger: GGAAGAAAAGGAGAAACTGCAGAAGCATGGGGTGTG...CAACTCTATTTCAGGTGCCCCACACCGGCAAGTACCAGCCAGCAACACCAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp GATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCACACCCCATGCTTCTaGAGTTTCTCCTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: DGGFAKGFTDWLLNRRVWHTPCF*SFSFSS
Trigger: GGAAGAAAAGGAGAAACTGCAGAAGCATGGGGTGTG...CCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp GATTCTGGGAGCATGGACAATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGCGGATACACACCCCATaGTTCTGCAGTTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: DSGSMDNSQEVSCRQVSRRIHTP*FCSFSF
Trigger: AAAGGAGAAACTGCAGAAGCATGGGGTGTGTATCCG...CCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATTGTCCATGCTCCCAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp GACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGGGCCTGTACAGCTTGTaGAATCAGCTCCTGGAGATC +
Preference number: 4 (lower is better)
Translates to: DLGLVYSWETFTLNPPQEGLYSL*NQLLEI
Trigger: GATCTCCAGGAGCTGATTGCACAAGCTGTACAGGCC...CTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCTAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp AGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTGGCCTGTACAGCTTGTaGAATCAGCTCCTGGAGATC +
Preference number: 4 (lower is better)
Translates to: RFSVLVGDFHPQSSSGACGLYSL*NQLLEI
Trigger: GATCTCCAGGAGCTGATTGCACAAGCTGTACAGGCC...ACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp CTCAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCATGACGGGATGTGTATaGAAAACAGACATTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LRSLSQAAQRYLWPANLAMTGCV*KTDIQE
Trigger: TTCCTGAATGTCTGTTTTGCATACACATCCCGTCAT...GGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR GCA 90 bp CTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTTCCTCTTCCGCTCCTCTaGATACATGTCTCGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LPSQAKGTPFIIRKGGAFPLPLL*IHVSGL
Trigger: AAGGCCCGAGACATGTATGCAGAGGAGCGGAAGAGG...AAAGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp TGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGGGAGCATGGACACCTCTTCCGCTCCTCTaGATACATGTCTCGGGCCTT +
Preference number: 4 (lower is better)
Translates to: WLLNRRVWHLCLILGAWTPLPLL*IHVSGL
Trigger: AAGGCCCGAGACATGTATGCAGAGGAGCGGAAGAGG...TGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTTCCCTCTTCCGCTCCTCTaGATACATGTCTCGGGCCTT +
Preference number: 4 (lower is better)
Translates to: SPAKQREHHSLSGKEVPFPLPLL*IHVSGL
Trigger: AAGGCCCGAGACATGTATGCAGAGGAGCGGAAGAGG...GAAAGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp TGCACAAATCACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGCAGCCCTTCCCTCTCCAGCTGCTaGCTCTTCCGCTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: CTNHTCPKQPRVLLFCSPSLSSC*LFRSSA
Trigger: TGCAGAGGAGCGGAAGAGGCAGCAGCTGGAGAGGGA...AGGGCTGCAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTGATTTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CTATTGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAACTGGCCGAGAGTTTGTaGAAGCGTGTCCTTCGGAGC +
Preference number: 4 (lower is better)
Translates to: LLVTRPRFSVLVGDFHPQLAESL*KRVLRS
Trigger: GCTCCGAAGGACACGCTTGCACAAACTCTCGGCCAG...TTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CCTGGCTTGCACAAATCACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGTGGAGCCTGGCCCCATaGCCTGCAAGAGGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PGLHKSHLSKATTSSTILWSLAP*PARGGE
Trigger: TTCTCCTCCTCTTGCAGGGCATGGGGCCAGGCTCCA...CAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTGATTTGTGCAAGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CCGCATAATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGTAAAGCTTGGAGCCTGGCCCCATaGCCTGCAAGAGGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PHNSCLPNYGCQQPHCKAWSLAP*PARGGE
Trigger: TTCTCCTCCTCTTGCAGGGCATGGGGCCAGGCTCCA...AGCTTTACAATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATTATGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CCTGCAAGAGGAGGAGAAAAGCTTGTGTGGGCTGAGTCGACAATAGGTAATTGGTACAGGGGAGGCCTGTaGTGGATTCAGTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: PARGGEKLVWAESTIGNWYRGGL*WIQFTR
Trigger: CCTGGTGAACTGAATCCAGCACAGGCCTCCCCTGTA...CCAATTACCTATTGTCGACTCAGCCCACACAAGCTTTTCTCCTCCTCTTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TACCCCAATCATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACTACAGGGGAGGCCTGTaGTGGATTCAGTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: YPNHITESQTQETGLNSHYRGGL*WIQFTR
Trigger: CCTGGTGAACTGAATCCAGCACAGGCCTCCCCTGTA...GTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATATGATTGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp GGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGAGCCAAGAAGTCTCTTaGCGCCAGGTATCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: GFTDWLLNRRVWHLCLILSQEVS*RQVSRD
Trigger: GTCCCGGGATACCTGGCGGCAAGAGACTTCTTGGCT...CAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp ACTTGTTGTAGTTCTTCGTGGCCTGTACAGCTTGTGCAATCAGCTCCTGGAGATAGCCAAGAAGTCTCTTaGCGCCAGGTATCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: TCCSSSWPVQLVQSAPGDSQEVS*RQVSRD
Trigger: GTCCCGGGATACCTGGCGGCAAGAGACTTCTTGGCT...ATCTCCAGGAGCTGATTGCACAAGCTGTACAGGCCACGAAGAACTACAACAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS-3UTR GCA 90 bp CCATTCATTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGGCAGATTCCGTTTGCTaGCTCCAGCCCCTCATTCCC +
Preference number: 4 (lower is better)
Translates to: PFIIRKGGAFHQEKEGEWADSVC*LQPLIP
Trigger: GGGAATGAGGGGCTGGAGGCAGCAAACGGAATCTGC...CCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAATGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp ACTTGTTGTAGTTCTTCGTGGCCTGTACAGCTTGTGCAATCAGCTCCTGGAGATGCAGATTCCGTTTGCTaGCTCCAGCCCCTCATTCCC +
Preference number: 4 (lower is better)
Translates to: TCCSSSWPVQLVQSAPGDADSVC*LQPLIP
Trigger: GGGAATGAGGGGCTGGAGGCAGCAAACGGAATCTGC...ATCTCCAGGAGCTGATTGCACAAGCTGTACAGGCCACGAAGAACTACAACAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS-3UTR GCA 90 bp CTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGGGAGCATGGACAATATTTTGCAGCCCTTGCTaGTGGGCGACGACGACGACC +
Preference number: 4 (lower is better)
Translates to: LLNRRVWHLCLILGAWTIFCSPC*WATTTT
Trigger: GGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAA...TATTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CCGCATAATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGTAAAGCTTTTTGCAGCCCTTGCTaGTGGGCGACGACGACGACC +
Preference number: 4 (lower is better)
Translates to: PHNSCLPNYGCQQPHCKAFCSPC*WATTTT
Trigger: GGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAA...AGCTTTACAATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATTATGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GGCTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTGTGCAATCAGCTCCTaGAGATCCAAGGGCAACAAG +
Preference number: 4 (lower is better)
Translates to: GSPAKQREHHSLSGKEVPCAISS*RSKGNK
Trigger: CTTGTTGCCCTTGGATCTCCAGGAGCTGATTGCACA...AGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp CGAGTTCTACTATTTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGTGTTGTAGTTCTTCGTaGCCTGTACAGCTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: RVLLFCSPCCWATTTTSLCCSSS*PVQLVQ
Trigger: TTGCACAAGCTGTACAGGCCACGAAGAACTACAACA...CAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp AATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGTAAAGCTGTAAAAGCGTCCCCACTGGCTTaGAGCCCCTCTCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NSCLPNYGCQQPHCKAVKASPLA*SPSRSS
Trigger: GCTGCTGCGAGAGGGGCTCCAAGCCAGTGGGGACGC...TTTTACAGCTTTACAATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp AATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGTAAAGCTGTAAAAGCTGGGCGTCCCCACTaGCTTGGAGCCCCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: NSCLPNYGCQQPHCKAVKAGRPH*LGAPLA
Trigger: TGCGAGAGGGGCTCCAAGCCAGTGGGGACGCCCAGC...TTTTACAGCTTTACAATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp AGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCATACTCGCTCTTCCCGTCTaGCCGAGAGTTTGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: RPKRDASPINHLYCTPIILALPV*PRVCAS
Trigger: GCTTGCACAAACTCTCGGCCAGACGGGAAGAGCGAG...TATGATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTCTCGCTCTTCCCGTCTaGCCGAGAGTTTGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: LQTLLVTRPRFSVLVGDFLALPV*PRVCAS
Trigger: GCTTGCACAAACTCTCGGCCAGACGGGAAGAGCGAG...AAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TGCACAAATCACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGCAGCCCTGGGCAAAGTGGCAGGTaGCCAGCCTCATTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CTNHTCPKQPRVLLFCSPGQSGR*PASFRL
Trigger: CAGCCTGAATGAGGCTGGCCACCTGCCACTTTGCCC...AGGGCTGCAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTGATTTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TGGCCCTTTGCTCTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCGCCCAAAGGTATCTATaGCCAGCAAACCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: WPFALQTLLVTRPRFSVLAQRYL*PANLAW
Trigger: CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGC...GAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAGAGCAAAGGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp AATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGGACAGAAAGGGGAAGAGGGGTGGAAGGCTAAAATaGAAGGGTAAAGAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: NSQEVSCRQVSRDRKGKRGGRLK*KGKELG
Trigger: CCCTAGCTCTTTACCCTTCCATTTTAGCCTTCCACC...CCTCTTCCCCTTTCTGTCCCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GGTGTGGATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGAGCCAAATCTTTTGTaGAAGCTGGGTGGAAGGCTA +
Preference number: 4 (lower is better)
Translates to: GVDGGFAKGFTDWLLNRREPNLL*KLGGRL
Trigger: TAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTC...ACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATCCACACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp AGATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAAGGCTAAAATGGAGGGGAGGCCTGTGCTaGATTCAGTTCACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RSKVEPNLLWKLGGRLKWRGGLC*IQFTRA
Trigger: GGCCCTGGTGAACTGAATCCAGCACAGGCCTCCCCT...CCATTTTAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CGAGTTCTACTATTTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGGTTGGAAGAAGTGTTTaGTTCTGCTCAGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: RVLLFCSPCCWATTTTSLVGRSV*FCSVLL
Trigger: CAACAGGACTGAGCAGAACCAAACACTTCTTCCAAC...CAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGTTTGGTTGGTGTTGCTaGCTGGTACTTGCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: DLGLVYSWETFTLNPPQEFGWCC*LVLAGV
Trigger: CACACCGGCAAGTACCAGCCAGCAACACCAACCAAA...CTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCTAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCAGGCAAAAGAGAGTAGCATTTaGTTGGTGTTGCTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: CTRGRLSPSILLRSLSQAKESSI*LVLLAG
Trigger: ACCAGCCAGCAACACCAACCAAATGCTACTCTCTTT...TGCCTGGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TACCCCAATCATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACAGGGGAAGAGGCGGGTaGGGTATAGGAAAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: YPNHITESQTQETGLNSHRGRGG*GIGKLG
Trigger: CCCTAACTTTCCTATACCCCACCCGCCTCTTCCCCT...GTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATATGATTGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CCTGCAAGAGGAGGAGAAAAGCTTGTGTGGGCTGAGTCGACAATAGGTAATTGGAGTGCCAGGTGTGGATaGGGGCTTTGCCAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: PARGGEKLVWAESTIGNWSARCG*GLCQRV
Trigger: AACCCTTTGGCAAAGCCCCCATCCACACCTGGCACT...CCAATTACCTATTGTCGACTCAGCCCACACAAGCTTTTCTCCTCCTCTTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TGCACAAATCACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGCAGCCCTGGGGAGTGCCAGGTGTaGATGGGGGCTTTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: CTNHTCPKQPRVLLFCSPGECQV*MGALPK
Trigger: CTTTGGCAAAGCCCCCATCCACACCTGGCACTCCCC...AGGGCTGCAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTGATTTGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGGGTTCCCGTCCATTATaGATGCAATGTGTTTCGGCA +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWGSRPL*MQCVSA
Trigger: TGCCGAAACACATTGCATTCATAATGGACGGGAACC...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR TCA 90 bp GATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGGCATTGCTGATCTCATaGCGGGATGTGTATGCAAAA +
Preference number: 4 (lower is better)
Translates to: DGGFAKGFTDWLLNRRVWALLIS*RDVYAK
Trigger: TTTTGCATACACATCCCGTCATGAGATCAGCAATGC...CCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR TCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGCTCTCACAGCATTGCTaGTCTCATGACGGGATGTGT +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALLSQHC*SHDGMC
Trigger: ACACATCCCGTCATGAGATCAGCAATGCTGTGAGAG...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000526219.5
CDS-3UTR TCA 90 bp ATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAAGGCTAAAATGGAAGCCCTTCTGTTACCCTaGACCATGGAGGGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: IQGRAKSFVEAGWKAKMEALLLP*TMEGAS
Trigger: ACTGGCCCCCTCCATGGTTCAGGGTAACAGAAGGGC...TTCCATTTTAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp CATTATAGCCGCATAATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGCCCTTCTGTTACCCTaGACCATGGAGGGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: HYSRIIHASLIMAVNSPIALLLP*TMEGAS
Trigger: ACTGGCCCCCTCCATGGTTCAGGGTAACAGAAGGGC...AATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATTATGCGGCTATAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp GCTTTGACCCTCACAAGCAGAGGACCTAGAACAAGCTTTGCCATGCCAAGAATAGTGGGAATCAGAGTTTaGGATGGTGAGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ALTLTSRGPRTSFAMPRIVGIRV*DGEGRE
Trigger: CTCCCTGCCCTCACCATCTCAAACTCTGATTCCCAC...TATTCTTGGCATGGCAAAGCTTGTTCTAGGTCCTCTGCTTGTGAGGGTCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp CTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGGGAGCATGGACAATACCGGTGTGGGGCACCTaGAATAGAGTTGCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: LLNRRVWHLCLILGAWTIPVWGT*NRVAQA
Trigger: TGCCTGAGCAACTCTATTTCAGGTGCCCCACACCGG...TATTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp AAGGCACTAATCCTCTCAGCAGCTCTGCAGCAAGTCCTGGCAGAGGGAGGTAAGTCTGGCATTTATGCTTaGTTCTGGGAGCATGGACAA +
Preference number: 4 (lower is better)
Translates to: KALILSAALQQVLAEGGKSGIYA*FWEHGQ
Trigger: TTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGA...CTTACCTCCCTCTGCCAGGACTTGCTGCAGAGCTGCTGAGAGGATTAGTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp GGTGTGGATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTCCCGTCCATTATGAATaGAATGTGTTTCGGCATTGG +
Preference number: 4 (lower is better)
Translates to: GVDGGFAKGFTDWLLNRRPVHYE*NVFRHW
Trigger: CCAATGCCGAAACACATTGCATTCATAATGGACGGG...ACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATCCACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR GCA 90 bp ACCTCTGGCCAAGTACATGGCACAGAGGGGCTTTATGGTTTGGTACAGGCCTGCCCCGTCCATTATGAATaGAATGTGTTTCGGCATTGG +
Preference number: 4 (lower is better)
Translates to: TSGQVHGTEGLYGLVQACPVHYE*NVFRHW
Trigger: CCAATGCCGAAACACATTGCATTCATAATGGACGGG...GCAGGCCTGTACCAAACCATAAAGCCCCTCTGTGCCATGTACTTGGCCAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR GCA 90 bp ACCTCTCTGCCTCTTCTTTCCACCACTACATCGCCTCCTGGGGCAGCTTCTCCCATGACGGGATGTGTATaGAAAACAGACATTCAGGAA +
Preference number: 4 (lower is better)
Translates to: TSLPLLSTTTSPPGAASPMTGCV*KTDIQE
Trigger: TTCCTGAATGTCTGTTTTGCATACACATCCCGTCAT...GGGAGAAGCTGCCCCAGGAGGCGATGTAGTGGTGGAAAGAAGAGGCAGAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR GCA 90 bp AGATCCATAAGCCCGTCTACCTCACTCTTGGAGCGTTTGAAGTTCTCAATGCTGTTGAGTTCCAAGGCCTaGAGGAAGCCTTGGACTCGC +
Preference number: 4 (lower is better)
Translates to: RSISPSTSLLERLKFSMLLSSKA*RKPWTR
Trigger: GCGAGTCCAAGGCTTCCTGCAGGCCTTGGAACTCAA...CAGCATTGAGAACTTCAAACGCTCCAAGAGTGAGGTAGACGGGCTTATGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS-3UTR GCA 90 bp GGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGGCCTTACCCAAATAACTaGCTGCCTATTAGTTATTTA +
Preference number: 4 (lower is better)
Translates to: GACPRQPKGIYGQQTWPGPYPNN*LPISYL
Trigger: TAAATAACTAATAGGCAGGCAGTTATTTGGGTAAGG...CCCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp AGATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAAGGCTAAAATGGCCTGGCCCCATGCCCTaGAAGAGGAGGAGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: RSKVEPNLLWKLGGRLKWPGPMP*KRRRKA
Trigger: AGCTTTTCTCCTCCTCTTGCAGGGCATGGGGCCAGG...CCATTTTAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CGAGTTCTACTATTTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGAGAAGTGTTTGGTTCTaGTCAGTCCTGTTGTGTTAC +
Preference number: 4 (lower is better)
Translates to: RVLLFCSPCCWATTTTSLRSVWF*SVLLCY
Trigger: GTAACACAACAGGACTGAGCAGAACCAAACACTTCT...CAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGGGAGCATGGACAATATTGCTGGCTGGTACTTaGCGGTGTGGGGCACCTGAA +
Preference number: 4 (lower is better)
Translates to: LLNRRVWHLCLILGAWTILLAGT*RCGAPE
Trigger: TTCAGGTGCCCCACACCGGCAAGTACCAGCCAGCAA...TATTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TGGCCCTTTGCTCTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCCGACGACGACCTCTCTaGCTCTTCTTTCCACCACTA +
Preference number: 4 (lower is better)
Translates to: WPFALQTLLVTRPRFSVLRRRPL*LFFPPL
Trigger: TAGTGGTGGAAAGAAGAGGCAGAGAGGTCGTCGTCG...GAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAGAGCAAAGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TACCCCAATCATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACCGAGTTCTACTATTTTaGAGCCCTTGCTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: YPNHITESQTQETGLNSHRVLLF*SPCCWA
Trigger: CGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCG...GTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATATGATTGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp GGGGTTTCTTGGTGTGTGGTGAACTCTAGTTCTGAAGCAGGTTGTAATAAGCCACTTGAACTCCTGGCCTaGCTCAAGTGGACTGCCCAC +
Preference number: 4 (lower is better)
Translates to: GVSWCVVNSSSEAGCNKPLELLA*LKWTAH
Trigger: GTGGGCAGTCCACTTGAGGCAGGCCAGGAGTTCAAG...TGGCTTATTACAACCTGCTTCAGAACTAGAGTTCACCACACACCAAGAAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR CCA 90 bp GAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCATATTACGGAAAGCCACCTGGCACTTCTTaGCATAGCGACGGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: EMPAPLITSTVPQSYYGKPPGTS*HSDGSR
Trigger: ACGGGAACCGTCGCTATGCCAAGAAGTGCCAGGTGG...CTTTCCGTAATATGATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR CCA 90 bp GAAGAAGTGTTTGGTTCTGCTCAGTCCTGTTGTGTTACAGGGGAGGCCTGTGCTTGTGCAATCAGCTCCTaGAGATCCAAGGGCAACAAG +
Preference number: 4 (lower is better)
Translates to: EEVFGSAQSCCVTGEACACAISS*RSKGNK
Trigger: CTTGTTGCCCTTGGATCTCCAGGAGCTGATTGCACA...AGCACAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAACCAAACACTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGACTCAGAGATATCACTaGGATCCAACAGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWTQRYH*DPTGLA
Trigger: AGCAAGGCCTGTTGGATCCCAGTGATATCTCTGAGT...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000526219.5
CDS-3UTR CCA 90 bp AAGGCACTAATCCTCTCAGCAGCTCTGCAGCAAGTCCTGGCAGAGGGAGGTAAGGATGAGGAGAGCGGTTaGTATAGAGGCACTTATCAA +
Preference number: 4 (lower is better)
Translates to: KALILSAALQQVLAEGGKDEESG*YRGTYQ
Trigger: TTGATAAGTGCCTCTATACCAACCGCTCTCCTCATC...CTTACCTCCCTCTGCCAGGACTTGCTGCAGAGCTGCTGAGAGGATTAGTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGGATGAGGAGAGCGGTTaGTATAGAGGCACTTATCAA +
Preference number: 4 (lower is better)
Translates to: DGGFAKGFTDWLLNRRVWDEESG*YRGTYQ
Trigger: TTGATAAGTGCCTCTATACCAACCGCTCTCCTCATC...CCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp ATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCCCAAAATGTATACTCTaGCCACAGAACGGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: MGALPKGSLIGFSIAVSGPKCIL*PQNGLE
Trigger: TTCCAACCCGTTCTGTGGCCAGAGTATACATTTTGG...GCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR CCA 90 bp CTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTTACGCTATGGTTCATCTaGAACTGCAGGATGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LPSQAKGTPFIIRKGGAFTLWFI*NCRMAS
Trigger: CGAGGCCATCCTGCAGTTCCAGATGAACCATAGCGT...AAAGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp TCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTTCACGCTATGGTTCATCTaGAACTGCAGGATGGCCTCG +
Preference number: 4 (lower is better)
Translates to: SPAKQREHHSLSGKEVPFTLWFI*NCRMAS
Trigger: CGAGGCCATCCTGCAGTTCCAGATGAACCATAGCGT...GAAAGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp ATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAAGGCTAAAATGGAAGAAAAGGAAGGGGAGTaGAGCCCTGGAGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: IQGRAKSFVEAGWKAKMEEKEGE*SPGGRG
Trigger: CCCTCTGCCTCCAGGGCTCCACTCCCCTTCCTTTTC...TTCCATTTTAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CATTCAGGAAACACTTGTTGTAGTTCTTCGTGGCCTGTACAGCTTGTGCAATCAGAAAAGGAAGGGGAGTaGAGCCCTGGAGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: HSGNTCCSSSWPVQLVQSEKEGE*SPGGRG
Trigger: CCCTCTGCCTCCAGGGCTCCACTCCCCTTCCTTTTC...TGATTGCACAAGCTGTACAGGCCACGAAGAACTACAACAAGTGTTTCCTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS-3UTR CCA 90 bp CCTCCAGCCCCTCATTCCCGCCTTAATTGTAGGGCTCTGCATTATAGCCGCATAGCAATCAGTACTGTGTaGTGGGAGAGGGTAGAGATT +
Preference number: 4 (lower is better)
Translates to: PPAPHSRLNCRALHYSRIAISTV*WERVEI
Trigger: AATCTCTACCCTCTCCCACCACACAGTACTGATTGC...TATGCGGCTATAATGCAGAGCCCTACAATTAAGGCGGGAATGAGGGGCTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp ATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGCTCATAGGGCAGGGAGCAGAGTCAGTTaGAAGAAGTGTTTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: ITESQTQETGLNSHAHRAGSRVS*KKCLVL
Trigger: CAGAACCAAACACTTCTTCCAACTGACTCTGCTCCC...TGCCCTATGAGCGTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GGCTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTGGGAGCAGAGTCAGTTaGAAGAAGTGTTTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: GSPAKQREHHSLSGKEVPGSRVS*KKCLVL
Trigger: CAGAACCAAACACTTCTTCCAACTGACTCTGCTCCC...AGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CTCTTCAAAGGCACTAATCCTCTCAGCAGCTCTGCAGCAAGTCCTGGCAGAGGGAGAAACCTCGAAGAGTaGAGTGGGAATCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: LFKGTNPLSSSAASPGRGRNLEE*SGNQSL
Trigger: CAAACTCTGATTCCCACTCCACTCTTCGAGGTTTCT...CCCTCTGCCAGGACTTGCTGCAGAGCTGCTGAGAGGATTAGTGCCTTTGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCAGGCATTGATTCTGGGAGCATaGACAATAGCCAAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: CTRGRLSPSILLRSLSQALILGA*TIAKKS
Trigger: AGACTTCTTGGCTATTGTCCATGCTCCCAGAATCAA...TGCCTGGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CGAGTTCTACTATTTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGTTGATTCTGGGAGCATaGACAATAGCCAAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: RVLLFCSPCCWATTTTSLLILGA*TIAKKS
Trigger: AGACTTCTTGGCTATTGTCCATGCTCCCAGAATCAA...CAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGAGTGCCAGGTGTGGATaGGGGCTTTGCCAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: GFTDWLLNRRVWHLCLILSARCG*GLCQRV
Trigger: AACCCTTTGGCAAAGCCCCCATCCACACCTGGCACT...CAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GCTTTGACCCTCACAAGCAGAGGACCTAGAACAAGCTTTGCCATGCCAAGAATAAGTGCCAGGTGTGGATaGGGGCTTTGCCAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: ALTLTSRGPRTSFAMPRISARCG*GLCQRV
Trigger: AACCCTTTGGCAAAGCCCCCATCCACACCTGGCACT...TATTCTTGGCATGGCAAAGCTTGTTCTAGGTCCTCTGCTTGTGAGGGTCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TGCACAAATCACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGCAGCCCTCACTACATCGCCTCCTaGGGCAGCTTCTCCCTACTC +
Preference number: 4 (lower is better)
Translates to: CTNHTCPKQPRVLLFCSPHYIAS*GSFSLL
Trigger: GAGTAGGGAGAAGCTGCCCCAGGAGGCGATGTAGTG...AGGGCTGCAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTGATTTGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp ACTTGTTGTAGTTCTTCGTGGCCTGTACAGCTTGTGCAATCAGCTCCTGGAGATCCTCAAATGGGGGCTTaGCTCACAGGTGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: TCCSSSWPVQLVQSAPGDPQMGA*LTGGRT
Trigger: TGTCCTTCCACCTGTGAGCCAAGCCCCCATTTGAGG...ATCTCCAGGAGCTGATTGCACAAGCTGTACAGGCCACGAAGAACTACAACAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS-3UTR CCA 90 bp ATGTCCTCAAATGGGGGCTTGGCTCACAGGTGGAAGGACACTAAATTGGTCCCAATAGATGTCCTCAAATaGGGGCTTGGCTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: MSSNGGLAHRWKDTKLVPIDVLK*GLGSQV
Trigger: CACCTGTGAGCCAAGCCCCCATTTGAGGACATCTAT...TGGGACCAATTTAGTGTCCTTCCACCTGTGAGCCAAGCCCCCATTTGAGGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACTTCCTCATGACGTaGCGCTGGCAGAACACGTCA +
Preference number: 4 (lower is better)
Translates to: LQTLLVTRPRFSVLVGDFHFLMT*RWQNTS
Trigger: TGACGTGTTCTGCCAGCGCCACGTCATGAGGAAGTG...AAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS-3UTR TCA 90 bp AGGGAGCCAGGTCAAAAAGCTGAGAGAAACCTCGAAGAGTGGAGTGGGAATCAGGGTTCCCGTCCATTATaGATGCAATGTGTTTCGGCA +
Preference number: 4 (lower is better)
Translates to: REPGQKAERNLEEWSGNQGSRPL*MQCVSA
Trigger: TGCCGAAACACATTGCATTCATAATGGACGGGAACC...CTGATTCCCACTCCACTCTTCGAGGTTTCTCTCAGCTTTTTGACCTGGCTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR TCA 90 bp GACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGGGTTCCCGTCCATTATaGATGCAATGTGTTTCGGCA +
Preference number: 4 (lower is better)
Translates to: DLGLVYSWETFTLNPPQEGSRPL*MQCVSA
Trigger: TGCCGAAACACATTGCATTCATAATGGACGGGAACC...CTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCTAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR TCA 90 bp CCATTCATTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGTCTCAGCTAGCTTGTTaGAGCCCTGTGAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: PFIIRKGGAFHQEKEGEWSQLAC*SPVSGL
Trigger: AAGGCCACTCACAGGGCTTCAACAAGCTAGCTGAGA...CCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAATGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000525682.6
CDS-3UTR TCA 90 bp GAAGAAGTGTTTGGTTCTGCTCAGTCCTGTTGTGTTACAGGGGAGGCCTGTGCTTCCAAACCCTATTGGTaGCCAGACCTAGGTTTAGTG +
Preference number: 4 (lower is better)
Translates to: EEVFGSAQSCCVTGEACASKPYW*PDLGLV
Trigger: CACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGA...AGCACAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAACCAAACACTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp TACCCCAATCATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGCCAGGTCAAAAAGCTaGGAGAAACCTCGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: YPNHITESQTQETGLNSHARSKS*EKPRRV
Trigger: CACTCTTCGAGGTTTCTCTCAGCTTTTTGACCTGGC...GTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATATGATTGGGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp CCTCCAGCCCCTCATTCCCGCCTTAATTGTAGGGCTCTGCATTATAGCCGCATATCTGGCATTTATGCTTaGTTCTGGGAGCATGGACAA +
Preference number: 4 (lower is better)
Translates to: PPAPHSRLNCRALHYSRISGIYA*FWEHGQ
Trigger: TTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGA...TATGCGGCTATAATGCAGAGCCCTACAATTAAGGCGGGAATGAGGGGCTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp CTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTTGCCAAAGGGTTCACTaGTTGGCTTCTCAATCGCCG +
Preference number: 4 (lower is better)
Translates to: LQTLLVTRPRFSVLVGDFCQRVH*LASQSP
Trigger: CGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCA...AAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp CTATTGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATGCCAAAGGGTTCACTaGTTGGCTTCTCAATCGCCG +
Preference number: 4 (lower is better)
Translates to: LLVTRPRFSVLVGDFHPQCQRVH*LASQSP
Trigger: CGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCA...TTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp CCTGGCTTGCACAAATCACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGTCTCGGGCCTTCTGCTaGAGCACGCTATGGTTCATC +
Preference number: 4 (lower is better)
Translates to: PGLHKSHLSKATTSSTILSRAFC*STLWFI
Trigger: GATGAACCATAGCGTGCTTCAGCAGAAGGCCCGAGA...CAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTGATTTGTGCAAGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360009.6
CDS-3UTR GCA 90 bp TTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCCCCGTCCATTATGAATaGAATGTGTTTCGGCATTGG +
Preference number: 4 (lower is better)
Translates to: FSVLVGDFHPQSSSGACPPVHYE*NVFRHW
Trigger: CCAATGCCGAAACACATTGCATTCATAATGGACGGG...GGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp GGGGTTTCTTGGTGTGTGGTGAACTCTAGTTCTGAAGCAGGTTGTAATAAGCCAAAGCGGCTGAACTTCTaGCGGGCCAGATCCATAAGC +
Preference number: 4 (lower is better)
Translates to: GVSWCVVNSSSEAGCNKPKRLNF*RARSIS
Trigger: GCTTATGGATCTGGCCCGGCAGAAGTTCAGCCGCTT...TGGCTTATTACAACCTGCTTCAGAACTAGAGTTCACCACACACCAAGAAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR GCA 90 bp AGGGAGCCAGGTCAAAAAGCTGAGAGAAACCTCGAAGAGTGGAGTGGGAATCAGCACACCCCATGCTTCTaGAGTTTCTCCTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: REPGQKAERNLEEWSGNQHTPCF*SFSFSS
Trigger: GGAAGAAAAGGAGAAACTGCAGAAGCATGGGGTGTG...CTGATTCCCACTCCACTCTTCGAGGTTTCTCTCAGCTTTTTGACCTGGCTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TGCACAAATCACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGCAGCCCTTTGAGTTCCAAGGCCTaGAGGAAGCCTTGGACTCGC +
Preference number: 4 (lower is better)
Translates to: CTNHTCPKQPRVLLFCSPLSSKA*RKPWTR
Trigger: GCGAGTCCAAGGCTTCCTGCAGGCCTTGGAACTCAA...AGGGCTGCAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTGATTTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp GATTCTGGGAGCATGGACAATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGTATCAGGAAAGGAGGTaGCTTTCACCAAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: DSGSMDNSQEVSCRQVSRYQERR*LSPRKG
Trigger: TCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA...CCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATTGTCCATGCTCCCAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp GATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGTATCAGGAAAGGAGGTaGCTTTCACCAAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: DGGFAKGFTDWLLNRRVWYQERR*LSPRKG
Trigger: TCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA...CCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CTCTTCAAAGGCACTAATCCTCTCAGCAGCTCTGCAGCAAGTCCTGGCAGAGGGAGAAGTGTTTGGTTCTaGTCAGTCCTGTTGTGTTAC +
Preference number: 4 (lower is better)
Translates to: LFKGTNPLSSSAASPGRGRSVWF*SVLLCY
Trigger: GTAACACAACAGGACTGAGCAGAACCAAACACTTCT...CCCTCTGCCAGGACTTGCTGCAGAGCTGCTGAGAGGATTAGTGCCTTTGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp AGGAAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTTCTCCAGGAACCCTGTaGCAGGGATTGGTAGAGGGG +
Preference number: 4 (lower is better)
Translates to: RKVRGFLCALATTCKISPSPGTL*QGLVEG
Trigger: CCCCTCTACCAATCCCTGGCACAGGGTTCCTGGAGA...AGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp AGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCATACGACGACGACCTCTCTaGCTCTTCTTTCCACCACTA +
Preference number: 4 (lower is better)
Translates to: RPKRDASPINHLYCTPIIRRRPL*LFFPPL
Trigger: TAGTGGTGGAAAGAAGAGGCAGAGAGGTCGTCGTCG...TATGATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTCGACGACGACCTCTCTaGCTCTTCTTTCCACCACTA +
Preference number: 4 (lower is better)
Translates to: LQTLLVTRPRFSVLVGDFRRRPL*LFFPPL
Trigger: TAGTGGTGGAAAGAAGAGGCAGAGAGGTCGTCGTCG...AAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CCTGCAAGAGGAGGAGAAAAGCTTGTGTGGGCTGAGTCGACAATAGGTAATTGGGGGTTGAACCTGGCTTaGACAAATCACACCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PARGGEKLVWAESTIGNWGLNLA*TNHTCP
Trigger: TGGACAGGTGTGATTTGTGCAAGCCAGGTTCAACCC...CCAATTACCTATTGTCGACTCAGCCCACACAAGCTTTTCTCCTCCTCTTGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TGGCCCTTTGCTCTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCTGTGCAATCAGCTCCTaGAGATCCAAGGGCAACAAG +
Preference number: 4 (lower is better)
Translates to: WPFALQTLLVTRPRFSVLCAISS*RSKGNK
Trigger: CTTGTTGCCCTTGGATCTCCAGGAGCTGATTGCACA...GAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAGAGCAAAGGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TCTGGAACTGCAGGATGGCCTCGAAGAGGTTCCAAAATGTATACTCTGGCCACATGTGCAATCAGCTCCTaGAGATCCAAGGGCAACAAG +
Preference number: 4 (lower is better)
Translates to: SGTAGWPRRGSKMYTLATCAISS*RSKGNK
Trigger: CTTGTTGCCCTTGGATCTCCAGGAGCTGATTGCACA...TGTGGCCAGAGTATACATTTTGGAACCTCTTCGAGGCCATCCTGCAGTTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS-3UTR CCA 90 bp GGCTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTGATGAGGAGAGCGGTTaGTATAGAGGCACTTATCAA +
Preference number: 4 (lower is better)
Translates to: GSPAKQREHHSLSGKEVPDEESG*YRGTYQ
Trigger: TTGATAAGTGCCTCTATACCAACCGCTCTCCTCATC...AGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGGATGAGGAGAGCGGTTaGTATAGAGGCACTTATCAA +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWDEESG*YRGTYQ
Trigger: TTGATAAGTGCCTCTATACCAACCGCTCTCCTCATC...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGCCAAAATGTATACTCTaGCCACAGAACGGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWPKCIL*PQNGLE
Trigger: TTCCAACCCGTTCTGTGGCCAGAGTATACATTTTGG...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CCA 90 bp AGATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAAGGCTAAAATGGGCCCAAAGGTATCTATaGCCAGCAAACCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RSKVEPNLLWKLGGRLKWAQRYL*PANLAW
Trigger: CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGC...CCATTTTAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGGGTTTAGTGTACTCGTaGGAGACTTTCACCCTCAAT +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWGLVYS*ETFTLN
Trigger: ATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACC...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp GGCTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTGGTTTAGTGTACTCGTaGGAGACTTTCACCCTCAAT +
Preference number: 4 (lower is better)
Translates to: GSPAKQREHHSLSGKEVPGLVYS*ETFTLN
Trigger: ATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACC...AGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp CATTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCGGTGGAAGGCTAAAATaGAAGGGTAAAGAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: HYQERRCLSPRKGRGVEPGGRLK*KGKELG
Trigger: CCCTAGCTCTTTACCCTTCCATTTTAGCCTTCCACC...GGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp ATGTCCTCAAATGGGGGCTTGGCTCACAGGTGGAAGGACACTAAATTGGTCCCAGAGCCAAATCTTTTGTaGAAGCTGGGTGGAAGGCTA +
Preference number: 4 (lower is better)
Translates to: MSSNGGLAHRWKDTKLVPEPNLL*KLGGRL
Trigger: TAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTC...TGGGACCAATTTAGTGTCCTTCCACCTGTGAGCCAAGCCCCCATTTGAGGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GAAGAAGTGTTTGGTTCTGCTCAGTCCTGTTGTGTTACAGGGGAGGCCTGTGCTGCAATCAGTACTGTGTaGTGGGAGAGGGTAGAGATT +
Preference number: 4 (lower is better)
Translates to: EEVFGSAQSCCVTGEACAAISTV*WERVEI
Trigger: AATCTCTACCCTCTCCCACCACACAGTACTGATTGC...AGCACAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAACCAAACACTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp ATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGCTCATAGGGCATCGACAATAGGTAATTaGATTGTAATCGCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: ITESQTQETGLNSHAHRASTIGN*IVIARL
Trigger: CAGGCGGGCGATTACAATCCAATTACCTATTGTCGA...TGCCCTATGAGCGTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCGTTGGAAGAAGTGTTTaGTTCTGCTCAGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: FSVLVGDFHPQSSSGACPVGRSV*FCSVLL
Trigger: CAACAGGACTGAGCAGAACCAAACACTTCTTCCAAC...GGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CATTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCGGGAGCAGAGTCAGTTaGAAGAAGTGTTTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: HYQERRCLSPRKGRGVEPGSRVS*KKCLVL
Trigger: CAGAACCAAACACTTCTTCCAACTGACTCTGCTCCC...GGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GGCTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTAGAGTAGCATTTGGTTaGTGTTGCTGGCTGGTACTT +
Preference number: 4 (lower is better)
Translates to: GSPAKQREHHSLSGKEVPRVAFG*CCWLVL
Trigger: AAGTACCAGCCAGCAACACCAACCAAATGCTACTCT...AGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTTGGCTTGGCTCACAGGTaGAAGGACACTAAATTGGTC +
Preference number: 4 (lower is better)
Translates to: LPSQAKGTPFIIRKGGAFGLAHR*KDTKLV
Trigger: GACCAATTTAGTGTCCTTCCACCTGTGAGCCAAGCC...AAAGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CAA 72 bp AATGGGGGCTTGGCTCACAGGTGGAAGGACACTAAATaGGTCCCATCTGATTTCTTGAGGCAAGGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: NGGLAHRWKDTK*VPSDFLRQGLN
Trigger: GTTCAACCCTTGCCTCAAGAAATCAGATGGGACCAATTTAGTGTCCTTCCACCTGTGAGCCAAGCCCCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGCATTGCTGATCTCATaGCGGGATGTGTATGCAAAA +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALALLIS*RDVYAK
Trigger: TTTTGCATACACATCCCGTCATGAGATCAGCAATGC...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000526219.5
CDS-3UTR TCA 90 bp AAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTGTGGGAATCAGAGTTTaGGATGGTGAGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KGFTDWLLNRRVWHLCLIVGIRV*DGEGRE
Trigger: CTCCCTGCCCTCACCATCTCAAACTCTGATTCCCAC...AATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp CTATTGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAAGCCAGGTCAAAAAGCTaGGAGAAACCTCGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: LLVTRPRFSVLVGDFHPQARSKS*EKPRRV
Trigger: CACTCTTCGAGGTTTCTCTCAGCTTTTTGACCTGGC...TTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGTATCAGGAAAGGAGGTaGCTTTCACCAAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWYQERR*LSPRKG
Trigger: TCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR GCA 90 bp AGGAAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTTACAGGGGAGGCCTGTaGTGGATTCAGTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: RKVRGFLCALATTCKISPYRGGL*WIQFTR
Trigger: CCTGGTGAACTGAATCCAGCACAGGCCTCCCCTGTA...AGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TTCCCTGAAATTCTGTGTGTTGAAGGATGTGCTGGTGGAAAAAGAAAGTGCATCATTGGTAGAGGGGAGTaGCAGGTGTGGATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: FPEILCVEGCAGGKRKCIIGRGE*QVWMGA
Trigger: AGCCCCCATCCACACCTGGCACTCCCCTCTACCAAT...GATGCACTTTCTTTTTCCACCAGCACATCCTTCAACACACAGAATTTCAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp AGGAAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTAGGGCAGATTCCGTTTaGTGCCTCCAGCCCCTCATT +
Preference number: 4 (lower is better)
Translates to: RKVRGFLCALATTCKISPRADSV*CLQPLI
Trigger: AATGAGGGGCTGGAGGCAGCAAACGGAATCTGCCCT...AGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGAATGTGTTTCGGCATTaGGCCTGCCTTTATGATGTT +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWNVFRH*ACLYDV
Trigger: AACATCATAAAGGCAGGCCCAATGCCGAAACACATT...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CCA 90 bp GAAGAAGGAAAATGGACTTTAAAGAGAGTAGCATTTGGTTGGTGTTGCTGGCTGCCACCTGGCACTTCTTaGCATAGCGACGGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: EEGKWTLKRVAFGWCCWLPPGTS*HSDGSR
Trigger: ACGGGAACCGTCGCTATGCCAAGAAGTGCCAGGTGG...CAGCCAGCAACACCAACCAAATGCTACTCTCTTTAAAGTCCATTTTCCTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR CCA 90 bp CTCAGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCTGTTGTAGTTCTTCGTaGCCTGTACAGCTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: LRPKRDASPINHLYCTPICCSSS*PVQLVQ
Trigger: TTGCACAAGCTGTACAGGCCACGAAGAACTACAACA...GATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGCCAAAATGTATACTCTaGCCACAGAACGGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALPKCIL*PQNGLE
Trigger: TTCCAACCCGTTCTGTGGCCAGAGTATACATTTTGG...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CCA 90 bp CTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGGGAGCATGGACAATAACGCTATGGTTCATCTaGAACTGCAGGATGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LLNRRVWHLCLILGAWTITLWFI*NCRMAS
Trigger: CGAGGCCATCCTGCAGTTCCAGATGAACCATAGCGT...TATTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR CCA 90 bp GACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGGGTTTAGTGTACTCGTaGGAGACTTTCACCCTCAAT +
Preference number: 4 (lower is better)
Translates to: DLGLVYSWETFTLNPPQEGLVYS*ETFTLN
Trigger: ATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACC...CTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCTAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp CTCAGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCAAAGAGCTAGGGTTTTaGGGAGAACTCTTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: LRPKRDASPINHLYCTPIKELGF*GELFPE
Trigger: TTCAGGGAAGAGTTCTCCCCAAAACCCTAGCTCTTT...GATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GAAGAAGTGTTTGGTTCTGCTCAGTCCTGTTGTGTTACAGGGGAGGCCTGTGCTAAAGAGCTAGGGTTTTaGGGAGAACTCTTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: EEVFGSAQSCCVTGEACAKELGF*GELFPE
Trigger: TTCAGGGAAGAGTTCTCCCCAAAACCCTAGCTCTTT...AGCACAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAACCAAACACTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TGGCCCTTTGCTCTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCGAGCCAAATCTTTTGTaGAAGCTGGGTGGAAGGCTA +
Preference number: 4 (lower is better)
Translates to: WPFALQTLLVTRPRFSVLEPNLL*KLGGRL
Trigger: TAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTC...GAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAGAGCAAAGGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TACCCCAATCATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGAGCCAAATCTTTTGTaGAAGCTGGGTGGAAGGCTA +
Preference number: 4 (lower is better)
Translates to: YPNHITESQTQETGLNSHEPNLL*KLGGRL
Trigger: TAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTC...GTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATATGATTGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TGGCCCTTTGCTCTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCGCAATCAGTACTGTGTaGTGGGAGAGGGTAGAGATT +
Preference number: 4 (lower is better)
Translates to: WPFALQTLLVTRPRFSVLAISTV*WERVEI
Trigger: AATCTCTACCCTCTCCCACCACACAGTACTGATTGC...GAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAGAGCAAAGGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GAAGAAGTGTTTGGTTCTGCTCAGTCCTGTTGTGTTACAGGGGAGGCCTGTGCTTCGACAATAGGTAATTaGATTGTAATCGCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: EEVFGSAQSCCVTGEACASTIGN*IVIARL
Trigger: CAGGCGGGCGATTACAATCCAATTACCTATTGTCGA...AGCACAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAACCAAACACTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp AGATCCATAAGCCCGTCTACCTCACTCTTGGAGCGTTTGAAGTTCTCAATGCTGTGTTACCCTGAACCATaGAGGGGGCCAGTCTCATTT +
Preference number: 4 (lower is better)
Translates to: RSISPSTSLLERLKFSMLCYPEP*RGPVSF
Trigger: AAATGAGACTGGCCCCCTCCATGGTTCAGGGTAACA...CAGCATTGAGAACTTCAAACGCTCCAAGAGTGAGGTAGACGGGCTTATGGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS-3UTR CCA 90 bp GAAGAAGTGTTTGGTTCTGCTCAGTCCTGTTGTGTTACAGGGGAGGCCTGTGCTAGAAACCTCGAAGAGTaGAGTGGGAATCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: EEVFGSAQSCCVTGEACARNLEE*SGNQSL
Trigger: CAAACTCTGATTCCCACTCCACTCTTCGAGGTTTCT...AGCACAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAACCAAACACTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TGCACAAATCACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGCAGCCCTTTTGGTTGGTGTTGCTaGCTGGTACTTGCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: CTNHTCPKQPRVLLFCSPFGWCC*LVLAGV
Trigger: CACACCGGCAAGTACCAGCCAGCAACACCAACCAAA...AGGGCTGCAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTGATTTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGAGAGTAGCATTTGGTTaGTGTTGCTGGCTGGTACTT +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALRVAFG*CCWLVL
Trigger: AAGTACCAGCCAGCAACACCAACCAAATGCTACTCT...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CTCAGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCCTCAATCGCCGTGTCTaGCATTTATGCTTGATTCTG +
Preference number: 4 (lower is better)
Translates to: LRPKRDASPINHLYCTPILNRRV*HLCLIL
Trigger: CAGAATCAAGCATAAATGCCAGACACGGCGATTGAG...GATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCTCAATCGCCGTGTCTaGCATTTATGCTTGATTCTG +
Preference number: 4 (lower is better)
Translates to: DLGLVYSWETFTLNPPQELNRRV*HLCLIL
Trigger: CAGAATCAAGCATAAATGCCAGACACGGCGATTGAG...CTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCTAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTGGCTTGGCTCACAGGTaGAAGGACACTAAATTGGTC +
Preference number: 4 (lower is better)
Translates to: LQTLLVTRPRFSVLVGDFGLAHR*KDTKLV
Trigger: GACCAATTTAGTGTCCTTCCACCTGTGAGCCAAGCC...AAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GCTTTGACCCTCACAAGCAGAGGACCTAGAACAAGCTTTGCCATGCCAAGAATAATAGATGTCCTCAAATaGGGGCTTGGCTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: ALTLTSRGPRTSFAMPRIIDVLK*GLGSQV
Trigger: CACCTGTGAGCCAAGCCCCCATTTGAGGACATCTAT...TATTCTTGGCATGGCAAAGCTTGTTCTAGGTCCTCTGCTTGTGAGGGTCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GGGGTTTCTTGGTGTGTGGTGAACTCTAGTTCTGAAGCAGGTTGTAATAAGCCAACAACTCGGGATACCTaGGATCCAACAGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: GVSWCVVNSSSEAGCNKPTTRDT*DPTGLA
Trigger: AGCAAGGCCTGTTGGATCCCAGGTATCCCGAGTTGT...TGGCTTATTACAACCTGCTTCAGAACTAGAGTTCACCACACACCAAGAAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR CCA 90 bp GGGGTTTCTTGGTGTGTGGTGAACTCTAGTTCTGAAGCAGGTTGTAATAAGCCACTCTGGCCAAGTACATaGCACAGAGGGGCTTTATGG +
Preference number: 4 (lower is better)
Translates to: GVSWCVVNSSSEAGCNKPLWPST*HRGALW
Trigger: CCATAAAGCCCCTCTGTGCCATGTACTTGGCCAGAG...TGGCTTATTACAACCTGCTTCAGAACTAGAGTTCACCACACACCAAGAAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374185.7
3UTR CAA 72 bp AAAATGGACTTTAAAGAGAGTAGCATTTGGTTGGTGTaGCTGGCTGGTACTTGCCGGTGTGGGGCACCTGAA +
Preference number: 4 (lower is better)
Translates to: KMDFKESSIWLV*LAGTCRCGAPE
Trigger: TTCAGGTGCCCCACACCGGCAAGTACCAGCCAGCAACACCAACCAAATGCTACTCTCTTTAAAGTCCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CAA 72 bp GAAACACTTGTTGTAGTTCTTCGTGGCCTGTACAGCTaGTGCAATCAGCTCCTGGAGATCCAAGGGCAACAA +
Preference number: 4 (lower is better)
Translates to: ETLVVVLRGLYS*CNQLLEIQGQQ
Trigger: TTGTTGCCCTTGGATCTCCAGGAGCTGATTGCACAAGCTGTACAGGCCACGAAGAACTACAACAAGTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS-3UTR TCA 90 bp CATTATAGCCGCATAATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGAACCGCTCCCAAAGTaGCAGCTCTCCTTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: HYSRIIHASLIMAVNSPIEPLPK*QLSFLD
Trigger: ATCAAGGAAGGAGAGCTGTCACTTTGGGAGCGGTTC...AATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATTATGCGGCTATAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR TCA 90 bp AGGAAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTTTGGGCCTGCCTTTATaGTGTTGGCACAGAACCGCT +
Preference number: 4 (lower is better)
Translates to: RKVRGFLCALATTCKISPLGLPL*CWHRTA
Trigger: AGCGGTTCTGTGCCAACATCATAAAGGCAGGCCCAA...AGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR TCA 90 bp CTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTTGCATTGCTGATCTCATaGCGGGATGTGTATGCAAAA +
Preference number: 4 (lower is better)
Translates to: LPSQAKGTPFIIRKGGAFALLIS*RDVYAK
Trigger: TTTTGCATACACATCCCGTCATGAGATCAGCAATGC...AAAGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR TCA 90 bp AGATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAAGGCTAAAATGGGCCAGGTCAAAAAGCTaGGAGAAACCTCGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: RSKVEPNLLWKLGGRLKWARSKS*EKPRRV
Trigger: CACTCTTCGAGGTTTCTCTCAGCTTTTTGACCTGGC...CCATTTTAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp CCGCATAATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGTAAAGCTGCCAGGTCAAAAAGCTaGGAGAAACCTCGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: PHNSCLPNYGCQQPHCKAARSKS*EKPRRV
Trigger: CACTCTTCGAGGTTTCTCTCAGCTTTTTGACCTGGC...AGCTTTACAATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATTATGCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp CCTGCAAGAGGAGGAGAAAAGCTTGTGTGGGCTGAGTCGACAATAGGTAATTGGTCTGGCATTTATGCTTaGTTCTGGGAGCATGGACAA +
Preference number: 4 (lower is better)
Translates to: PARGGEKLVWAESTIGNWSGIYA*FWEHGQ
Trigger: TTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGA...CCAATTACCTATTGTCGACTCAGCCCACACAAGCTTTTCTCCTCCTCTTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp AGGAAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTGGCCTGTACAGCTTGTaGAATCAGCTCCTGGAGATC +
Preference number: 4 (lower is better)
Translates to: RKVRGFLCALATTCKISPGLYSL*NQLLEI
Trigger: GATCTCCAGGAGCTGATTGCACAAGCTGTACAGGCC...AGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp GACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGTATCAGGAAAGGAGGTaGCTTTCACCAAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: DLGLVYSWETFTLNPPQEYQERR*LSPRKG
Trigger: TCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA...CTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCTAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp CCGCATAATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGTAAAGCTAAAATGTACAGCACCTaGTCTCCAGGAACCCTGTGC +
Preference number: 4 (lower is better)
Translates to: PHNSCLPNYGCQQPHCKAKMYST*SPGTLC
Trigger: GCACAGGGTTCCTGGAGAGCAGGTGCTGTACATTTT...AGCTTTACAATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATTATGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp AGGAAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTCGAGTTCTACTATTTTaGAGCCCTTGCTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: RKVRGFLCALATTCKISPRVLLF*SPCCWA
Trigger: CGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCG...AGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp CCTGGCTTGCACAAATCACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGGGGTTGAACCTGGCTTaGACAAATCACACCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PGLHKSHLSKATTSSTILGLNLA*TNHTCP
Trigger: TGGACAGGTGTGATTTGTGCAAGCCAGGTTCAACCC...CAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTGATTTGTGCAAGCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGAATGTGTTTCGGCATTaGGCCTGCCTTTATGATGTT +
Preference number: 4 (lower is better)
Translates to: DLGLVYSWETFTLNPPQENVFRH*ACLYDV
Trigger: AACATCATAAAGGCAGGCCCAATGCCGAAACACATT...CTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCTAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp TCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTTCTGTTGTAGTTCTTCGTaGCCTGTACAGCTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: SPAKQREHHSLSGKEVPFCCSSS*PVQLVQ
Trigger: TTGCACAAGCTGTACAGGCCACGAAGAACTACAACA...GAAAGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp CTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTTCCAAAATGTATACTCTaGCCACAGAACGGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: LPSQAKGTPFIIRKGGAFPKCIL*PQNGLE
Trigger: TTCCAACCCGTTCTGTGGCCAGAGTATACATTTTGG...AAAGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp CCTCGAAGAGGTTCCAAAATGTATACTCTGGCCACAGAACGGGTTGGAACACCAAAAGAGCTAGGGTTTTaGGGAGAACTCTTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: PRRGSKMYTLATERVGTPKELGF*GELFPE
Trigger: TTCAGGGAAGAGTTCTCCCCAAAACCCTAGCTCTTT...TGGTGTTCCAACCCGTTCTGTGGCCAGAGTATACATTTTGGAACCTCTTCGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS-3UTR CCA 90 bp GAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCATATTACGGAAAGTGTTACCCTGAACCATaGAGGGGGCCAGTCTCATTT +
Preference number: 4 (lower is better)
Translates to: EMPAPLITSTVPQSYYGKCYPEP*RGPVSF
Trigger: AAATGAGACTGGCCCCCTCCATGGTTCAGGGTAACA...CTTTCCGTAATATGATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TACCCCAATCATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACAGAAACCTCGAAGAGTaGAGTGGGAATCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: YPNHITESQTQETGLNSHRNLEE*SGNQSL
Trigger: CAAACTCTGATTCCCACTCCACTCTTCGAGGTTTCT...GTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATATGATTGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TGGCCCTTTGCTCTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCAGAGTAGCATTTGGTTaGTGTTGCTGGCTGGTACTT +
Preference number: 4 (lower is better)
Translates to: WPFALQTLLVTRPRFSVLRVAFG*CCWLVL
Trigger: AAGTACCAGCCAGCAACACCAACCAAATGCTACTCT...GAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAGAGCAAAGGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TACCCCAATCATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACAGAGTAGCATTTGGTTaGTGTTGCTGGCTGGTACTT +
Preference number: 4 (lower is better)
Translates to: YPNHITESQTQETGLNSHRVAFG*CCWLVL
Trigger: AAGTACCAGCCAGCAACACCAACCAAATGCTACTCT...GTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATATGATTGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGGGAGCATGGACATTGCAGAAAGTAAAATaGGAAGTCTGGCATGGTGGC +
Preference number: 4 (lower is better)
Translates to: WLLNRRVWHLCLILGAWTLQKVK*EVWHGG
Trigger: GCCACCATGCCAGACTTCCCATTTTACTTTCTGCAA...TGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGAAAGGGTTCACTGATTaGCTTCTCAATCGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: GFTDWLLNRRVWHLCLILKGFTD*LLNRRV
Trigger: GACACGGCGATTGAGAAGCCAATCAGTGAACCCTTT...CAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TTATTTACTAGCAGATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAAGTGCCAGGTGTGGATaGGGGCTTTGCCAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: LFTSRSKVEPNLLWKLGGSARCG*GLCQRV
Trigger: AACCCTTTGGCAAAGCCCCCATCCACACCTGGCACT...TCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGATCTGCTAGTAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CCGCATAATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGTAAAGCTATAGATGTCCTCAAATaGGGGCTTGGCTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: PHNSCLPNYGCQQPHCKAIDVLK*GLGSQV
Trigger: CACCTGTGAGCCAAGCCCCCATTTGAGGACATCTAT...AGCTTTACAATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATTATGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp GGGGTTTCTTGGTGTGTGGTGAACTCTAGTTCTGAAGCAGGTTGTAATAAGCCAGGTTCCCGTCCATTATaGATGCAATGTGTTTCGGCA +
Preference number: 4 (lower is better)
Translates to: GVSWCVVNSSSEAGCNKPGSRPL*MQCVSA
Trigger: TGCCGAAACACATTGCATTCATAATGGACGGGAACC...TGGCTTATTACAACCTGCTTCAGAACTAGAGTTCACCACACACCAAGAAACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR TCA 90 bp AAAGTCATTCTTGGAAAAACACTACCAAAGGGCCAGGAGGGTATAATTTGTAAACTTGTTGAAGCCCTGTaGGTGGCCTTCCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: KVILGKTLPKGQEGIICKLVEAL*VAFLPL
Trigger: GAGCGGCAGGAAGGCCACTCACAGGGCTTCAACAAG...TTTACAAATTATACCCTCCTGGCCCTTTGGTAGTGTTTTTCCAAGAATGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR TCA 90 bp AAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTCTCCTCTCACAGCATTGCTaGTCTCATGACGGGATGTGT +
Preference number: 4 (lower is better)
Translates to: KVRGFLCALATTCKISPLLSQHC*SHDGMC
Trigger: ACACATCCCGTCATGAGATCAGCAATGCTGTGAGAG...GAGAGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR TCA 90 bp CCGCATAATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGTAAAGCTTCCAAACCCTATTGGTaGCCAGACCTAGGTTTAGTG +
Preference number: 4 (lower is better)
Translates to: PHNSCLPNYGCQQPHCKASKPYW*PDLGLV
Trigger: CACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGA...AGCTTTACAATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATTATGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp AAAGTCATTCTTGGAAAAACACTACCAAAGGGCCAGGAGGGTATAATTTGTAAATCCAAGGGCAACAAGTaGAGATCGCCCAGGACCCGG +
Preference number: 4 (lower is better)
Translates to: KVILGKTLPKGQEGIICKSKGNK*RSPRTR
Trigger: CCGGGTCCTGGGCGATCTGCACTTGTTGCCCTTGGA...TTTACAAATTATACCCTCCTGGCCCTTTGGTAGTGTTTTTCCAAGAATGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR GCA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGATGACGGGATGTGTATaGAAAACAGACATTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALMTGCV*KTDIQE
Trigger: TTCCTGAATGTCTGTTTTGCATACACATCCCGTCAT...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000526219.5
CDS-3UTR GCA 90 bp TCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTTCTATCAGGAAAGGAGGTaGCTTTCACCAAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: SPAKQREHHSLSGKEVPFYQERR*LSPRKG
Trigger: TCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA...GAAAGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR GCA 90 bp ATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAAGGCTAAAATGGAAATGTCTCGGGCCTTCTaGTGCCATAGCAAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: IQGRAKSFVEAGWKAKMEMSRAF*CHSKKS
Trigger: TGACTTCTTGCTATGGCAGCAGAAGGCCCGAGACAT...TTCCATTTTAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431933.5
CDS-3UTR CCA 90 bp CTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTTAATGTGTTTCGGCATTaGGCCTGCCTTTATGATGTT +
Preference number: 4 (lower is better)
Translates to: LPSQAKGTPFIIRKGGAFNVFRH*ACLYDV
Trigger: AACATCATAAAGGCAGGCCCAATGCCGAAACACATT...AAAGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp AAAGTCATTCTTGGAAAAACACTACCAAAGGGCCAGGAGGGTATAATTTGTAAATTGAAGCCCTGTGAGTaGCCTTCCTGCCGCTCCACC +
Preference number: 4 (lower is better)
Translates to: KVILGKTLPKGQEGIICKLKPCE*PSCRST
Trigger: GGTGGAGCGGCAGGAAGGCCACTCACAGGGCTTCAA...TTTACAAATTATACCCTCCTGGCCCTTTGGTAGTGTTTTTCCAAGAATGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR CCA 90 bp AAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTCTCTGTGCAATCAGCTCCTaGAGATCCAAGGGCAACAAG +
Preference number: 4 (lower is better)
Translates to: KVRGFLCALATTCKISPLCAISS*RSKGNK
Trigger: CTTGTTGCCCTTGGATCTCCAGGAGCTGATTGCACA...GAGAGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CCATTCATTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGTGTTGTAGTTCTTCGTaGCCTGTACAGCTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: PFIIRKGGAFHQEKEGEWCCSSS*PVQLVQ
Trigger: TTGCACAAGCTGTACAGGCCACGAAGAACTACAACA...CCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAATGAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CCA 90 bp CTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGGGAGCATGGACAATAACTCAGAGATATCACTaGGATCCAACAGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LLNRRVWHLCLILGAWTITQRYH*DPTGLA
Trigger: AGCAAGGCCTGTTGGATCCCAGTGATATCTCTGAGT...TATTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR CCA 90 bp CTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTGGTTTAGTGTACTCGTaGGAGACTTTCACCCTCAAT +
Preference number: 4 (lower is better)
Translates to: LQTLLVTRPRFSVLVGDFGLVYS*ETFTLN
Trigger: ATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACC...AAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGGTTGGAAGAAGTGTTTaGTTCTGCTCAGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: GFTDWLLNRRVWHLCLILVGRSV*FCSVLL
Trigger: CAACAGGACTGAGCAGAACCAAACACTTCTTCCAAC...CAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GCTTTGACCCTCACAAGCAGAGGACCTAGAACAAGCTTTGCCATGCCAAGAATAAAAGAGAGTAGCATTTaGTTGGTGTTGCTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: ALTLTSRGPRTSFAMPRIKESSI*LVLLAG
Trigger: ACCAGCCAGCAACACCAACCAAATGCTACTCTCTTT...TATTCTTGGCATGGCAAAGCTTGTTCTAGGTCCTCTGCTTGTGAGGGTCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp AGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCATATTGCAGAAAGTAAAATaGGAAGTCTGGCATGGTGGC +
Preference number: 4 (lower is better)
Translates to: RPKRDASPINHLYCTPIILQKVK*EVWHGG
Trigger: GCCACCATGCCAGACTTCCCATTTTACTTTCTGCAA...TATGATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp CTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTCTCAATCGCCGTGTCTaGCATTTATGCTTGATTCTG +
Preference number: 4 (lower is better)
Translates to: LQTLLVTRPRFSVLVGDFLNRRV*HLCLIL
Trigger: CAGAATCAAGCATAAATGCCAGACACGGCGATTGAG...AAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp TTCATGAAAAGTCATTCTTGGAAAAACACTACCAAAGGGCCAGGAGGGTATAATCGTGAGCTGCCATGCTaGCCCAGGCCTGTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: FMKSHSWKNTTKGPGGYNRELPC*PRPVFL
Trigger: AAGGAAAACAGGCCTGGGCCAGCATGGCAGCTCACG...ATTATACCCTCCTGGCCCTTTGGTAGTGTTTTTCCAAGAATGACTTTTCATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR CCA 90 bp TTCCCTGAAATTCTGTGTGTTGAAGGATGTGCTGGTGGAAAAAGAAAGTGCATCCTCATGACGTGGCGCTaGCAGAACACGTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: FPEILCVEGCAGGKRKCILMTWR*QNTSSL
Trigger: CAAAGATGACGTGTTCTGCCAGCGCCACGTCATGAG...GATGCACTTTCTTTTTCCACCAGCACATCCTTCAACACACAGAATTTCAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434391.6
3UTR CAA 72 bp GATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTaGATTCTGGGAGCATGGACAATAGCCAAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: DWLLNRRVWHLC*ILGAWTIAKKS
Trigger: AGACTTCTTGGCTATTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
3UTR CAA 72 bp AGGTGGAAGGACACTAAATTGGTCCCATCTGATTTCTaGAGGCAAGGGTTGAACCTGGCTTGCACAAATCAC +
Preference number: 4 (lower is better)
Translates to: RWKDTKLVPSDF*RQGLNLACTNH
Trigger: GTGATTTGTGCAAGCCAGGTTCAACCCTTGCCTCAAGAAATCAGATGGGACCAATTTAGTGTCCTTCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp AAAGTCATTCTTGGAAAAACACTACCAAAGGGCCAGGAGGGTATAATTTGTAAACTTCCATCAAGCGGCTaGACTTCTGCCGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: KVILGKTLPKGQEGIICKLPSSG*TSAGPD
Trigger: ATCTGGCCCGGCAGAAGTTCAGCCGCTTGATGGAAG...TTTACAAATTATACCCTCCTGGCCCTTTGGTAGTGTTTTTCCAAGAATGACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR TCA 90 bp GGGGTTTCTTGGTGTGTGGTGAACTCTAGTTCTGAAGCAGGTTGTAATAAGCCAGCATTGCTGATCTCATaGCGGGATGTGTATGCAAAA +
Preference number: 4 (lower is better)
Translates to: GVSWCVVNSSSEAGCNKPALLIS*RDVYAK
Trigger: TTTTGCATACACATCCCGTCATGAGATCAGCAATGC...TGGCTTATTACAACCTGCTTCAGAACTAGAGTTCACCACACACCAAGAAACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR TCA 90 bp TTCCCTGAAATTCTGTGTGTTGAAGGATGTGCTGGTGGAAAAAGAAAGTGCATCCTCTCACAGCATTGCTaGTCTCATGACGGGATGTGT +
Preference number: 4 (lower is better)
Translates to: FPEILCVEGCAGGKRKCILSQHC*SHDGMC
Trigger: ACACATCCCGTCATGAGATCAGCAATGCTGTGAGAG...GATGCACTTTCTTTTTCCACCAGCACATCCTTCAACACACAGAATTTCAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR GCA 90 bp CTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGGGAGCATGGACAATACCCGTCCATTATGAATaGAATGTGTTTCGGCATTGG +
Preference number: 4 (lower is better)
Translates to: LLNRRVWHLCLILGAWTIPVHYE*NVFRHW
Trigger: CCAATGCCGAAACACATTGCATTCATAATGGACGGG...TATTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR GCA 90 bp ATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAAGGCTAAAATGGAACGGATACACACCCCATaGTTCTGCAGTTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: IQGRAKSFVEAGWKAKMERIHTP*FCSFSF
Trigger: AAAGGAGAAACTGCAGAAGCATGGGGTGTGTATCCG...TTCCATTTTAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGCCTTACCCAAATAACTaGCTGCCTATTAGTTATTTA +
Preference number: 4 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWPYPNN*LPISYL
Trigger: TAAATAACTAATAGGCAGGCAGTTATTTGGGTAAGG...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TTATTTACTAGCAGATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAGGGTTGAACCTGGCTTaGACAAATCACACCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LFTSRSKVEPNLLWKLGGGLNLA*TNHTCP
Trigger: TGGACAGGTGTGATTTGTGCAAGCCAGGTTCAACCC...TCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGATCTGCTAGTAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp TTCCCTGAAATTCTGTGTGTTGAAGGATGTGCTGGTGGAAAAAGAAAGTGCATCGGGTTGAACCTGGCTTaGACAAATCACACCTGTCCA +
Preference number: 4 (lower is better)
Translates to: FPEILCVEGCAGGKRKCIGLNLA*TNHTCP
Trigger: TGGACAGGTGTGATTTGTGCAAGCCAGGTTCAACCC...GATGCACTTTCTTTTTCCACCAGCACATCCTTCAACACACAGAATTTCAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp AGGAAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTACTCAGAGATATCACTaGGATCCAACAGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: RKVRGFLCALATTCKISPTQRYH*DPTGLA
Trigger: AGCAAGGCCTGTTGGATCCCAGTGATATCTCTGAGT...AGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR CCA 90 bp AGATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAAGGCTAAAATGGGATGAGGAGAGCGGTTaGTATAGAGGCACTTATCAA +
Preference number: 4 (lower is better)
Translates to: RSKVEPNLLWKLGGRLKWDEESG*YRGTYQ
Trigger: TTGATAAGTGCCTCTATACCAACCGCTCTCCTCATC...CCATTTTAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp AAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTCTCGGTGGAAGGCTAAAATaGAAGGGTAAAGAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: KVRGFLCALATTCKISPLGGRLK*KGKELG
Trigger: CCCTAGCTCTTTACCCTTCCATTTTAGCCTTCCACC...GAGAGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCATATTACGGAAAGTCGACAATAGGTAATTaGATTGTAATCGCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: EMPAPLITSTVPQSYYGKSTIGN*IVIARL
Trigger: CAGGCGGGCGATTACAATCCAATTACCTATTGTCGA...CTTTCCGTAATATGATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp AAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTGGAGAAAAGCTTGTGTaGGCTGAGTCGACAATAGGT +
Preference number: 4 (lower is better)
Translates to: KGFTDWLLNRRVWHLCLIGEKLV*AESTIG
Trigger: ACCTATTGTCGACTCAGCCCACACAAGCTTTTCTCC...AATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp AAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTCTCGGGAGCAGAGTCAGTTaGAAGAAGTGTTTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: KVRGFLCALATTCKISPLGSRVS*KKCLVL
Trigger: CAGAACCAAACACTTCTTCCAACTGACTCTGCTCCC...GAGAGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp ATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAAGGCTAAAATGGAAAAAGGGTTCACTGATTaGCTTCTCAATCGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: IQGRAKSFVEAGWKAKMEKGFTD*LLNRRV
Trigger: GACACGGCGATTGAGAAGCCAATCAGTGAACCCTTT...TTCCATTTTAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GGGGTTTCTTGGTGTGTGGTGAACTCTAGTTCTGAAGCAGGTTGTAATAAGCCATTCTCTGGGGTTTCTTaGTGTGTGGTGAACTCTAGT +
Preference number: 4 (lower is better)
Translates to: GVSWCVVNSSSEAGCNKPFSGVS*CVVNSS
Trigger: ACTAGAGTTCACCACACACCAAGAAACCCCAGAGAA...TGGCTTATTACAACCTGCTTCAGAACTAGAGTTCACCACACACCAAGAAACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR CCA 90 bp AATCCCAGGCATTCAAGAATACTTCTCTTCTGCTATTACAATGAATTACATGTGGGTCAGGAGGCTCCCTaGGTGCTGAAGCACGCTATG +
Preference number: 4 (lower is better)
Translates to: NPRHSRILLFCYYNELHVGQEAP*VLKHAM
Trigger: CATAGCGTGCTTCAGCACCCAGGGAGCCTCCTGACC...CACATGTAATTCATTGTAATAGCAGAAGAGAAGTATTCTTGAATGCCTGGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS-3UTR CCA 90 bp AATCCCAGGCATTCAAGAATACTTCTCTTCTGCTATTACAATGAATTACATGTGGCTTCTTCCAGGCCTTaGTCAGGAGGCTCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: NPRHSRILLFCYYNELHVASSRP*SGGSLG
Trigger: ACCCAGGGAGCCTCCTGACCAAGGCCTGGAAGAAGC...CACATGTAATTCATTGTAATAGCAGAAGAGAAGTATTCTTGAATGCCTGGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416052.1
3UTR CAA 72 bp ACTAAATTGGTCCCATCTGATTTCTTGAGGCAAGGGTaGAACCTGGCTTGCACAAATCACACCTGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: TKLVPSDFLRQG*NLACTNHTCPK
Trigger: CTTTGGACAGGTGTGATTTGTGCAAGCCAGGTTCAACCCTTGCCTCAAGAAATCAGATGGGACCAATTTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp TTCATGAAAAGTCATTCTTGGAAAAACACTACCAAAGGGCCAGGAGGGTATAATGAACCGCTCCCAAAGTaGCAGCTCTCCTTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: FMKSHSWKNTTKGPGGYNEPLPK*QLSFLD
Trigger: ATCAAGGAAGGAGAGCTGTCACTTTGGGAGCGGTTC...ATTATACCCTCCTGGCCCTTTGGTAGTGTTTTTCCAAGAATGACTTTTCATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR TCA 90 bp TTCATGAAAAGTCATTCTTGGAAAAACACTACCAAAGGGCCAGGAGGGTATAATTTGGGCCTGCCTTTATaGTGTTGGCACAGAACCGCT +
Preference number: 4 (lower is better)
Translates to: FMKSHSWKNTTKGPGGYNLGLPL*CWHRTA
Trigger: AGCGGTTCTGTGCCAACATCATAAAGGCAGGCCCAA...ATTATACCCTCCTGGCCCTTTGGTAGTGTTTTTCCAAGAATGACTTTTCATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR GCA 90 bp AGGAAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTCCCGTCCATTATGAATaGAATGTGTTTCGGCATTGG +
Preference number: 4 (lower is better)
Translates to: RKVRGFLCALATTCKISPPVHYE*NVFRHW
Trigger: CCAATGCCGAAACACATTGCATTCATAATGGACGGG...AGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR GCA 90 bp AGGGAGCCAGGTCAAAAAGCTGAGAGAAACCTCGAAGAGTGGAGTGGGAATCAGCCTTACCCAAATAACTaGCTGCCTATTAGTTATTTA +
Preference number: 4 (lower is better)
Translates to: REPGQKAERNLEEWSGNQPYPNN*LPISYL
Trigger: TAAATAACTAATAGGCAGGCAGTTATTTGGGTAAGG...CTGATTCCCACTCCACTCTTCGAGGTTTCTCTCAGCTTTTTGACCTGGCTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp GGGGTTTCTTGGTGTGTGGTGAACTCTAGTTCTGAAGCAGGTTGTAATAAGCCACTTTGTCATCTGCTTTaGTCTTTCTCTGGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: GVSWCVVNSSSEAGCNKPLCHLL*SFSGVS
Trigger: AGAAACCCCAGAGAAAGAGCAAAGCAGATGACAAAG...TGGCTTATTACAACCTGCTTCAGAACTAGAGTTCACCACACACCAAGAAACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR CCA 90 bp GGGGTTTCTTGGTGTGTGGTGAACTCTAGTTCTGAAGCAGGTTGTAATAAGCCAAATGTGTTTCGGCATTaGGCCTGCCTTTATGATGTT +
Preference number: 4 (lower is better)
Translates to: GVSWCVVNSSSEAGCNKPNVFRH*ACLYDV
Trigger: AACATCATAAAGGCAGGCCCAATGCCGAAACACATT...TGGCTTATTACAACCTGCTTCAGAACTAGAGTTCACCACACACCAAGAAACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR CCA 90 bp CATTCAGGAAACACTTGTTGTAGTTCTTCGTGGCCTGTACAGCTTGTGCAATCATGTTGTAGTTCTTCGTaGCCTGTACAGCTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: HSGNTCCSSSWPVQLVQSCCSSS*PVQLVQ
Trigger: TTGCACAAGCTGTACAGGCCACGAAGAACTACAACA...TGATTGCACAAGCTGTACAGGCCACGAAGAACTACAACAAGTGTTTCCTGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS-3UTR CCA 90 bp AAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTGGTTTAGTGTACTCGTaGGAGACTTTCACCCTCAAT +
Preference number: 4 (lower is better)
Translates to: KGFTDWLLNRRVWHLCLIGLVYS*ETFTLN
Trigger: ATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACC...AATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GAAGAAGGAAAATGGACTTTAAAGAGAGTAGCATTTGGTTGGTGTTGCTGGCTGGGAGAAAAGCTTGTGTaGGCTGAGTCGACAATAGGT +
Preference number: 4 (lower is better)
Translates to: EEGKWTLKRVAFGWCCWLGEKLV*AESTIG
Trigger: ACCTATTGTCGACTCAGCCCACACAAGCTTTTCTCC...CAGCCAGCAACACCAACCAAATGCTACTCTCTTTAAAGTCCATTTTCCTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp AAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTAAAGAGAGTAGCATTTaGTTGGTGTTGCTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KGFTDWLLNRRVWHLCLIKESSI*LVLLAG
Trigger: ACCAGCCAGCAACACCAACCAAATGCTACTCTCTTT...AATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GAAGAAGGAAAATGGACTTTAAAGAGAGTAGCATTTGGTTGGTGTTGCTGGCTGAAAGGGTTCACTGATTaGCTTCTCAATCGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: EEGKWTLKRVAFGWCCWLKGFTD*LLNRRV
Trigger: GACACGGCGATTGAGAAGCCAATCAGTGAACCCTTT...CAGCCAGCAACACCAACCAAATGCTACTCTCTTTAAAGTCCATTTTCCTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp AATCCCAGGCATTCAAGAATACTTCTCTTCTGCTATTACAATGAATTACATGTGAGCTCTCCGTCTTGCTaGAAGGGCTTCTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: NPRHSRILLFCYYNELHVSSPSC*KGFFQA
Trigger: GGCCTGGAAGAAGCCCTTCCAGCAAGACGGAGAGCT...CACATGTAATTCATTGTAATAGCAGAAGAGAAGTATTCTTGAATGCCTGGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS-3UTR TCA 90 bp TTCCCTGAAATTCTGTGTGTTGAAGGATGTGCTGGTGGAAAAAGAAAGTGCATCGCATTGCTGATCTCATaGCGGGATGTGTATGCAAAA +
Preference number: 4 (lower is better)
Translates to: FPEILCVEGCAGGKRKCIALLIS*RDVYAK
Trigger: TTTTGCATACACATCCCGTCATGAGATCAGCAATGC...GATGCACTTTCTTTTTCCACCAGCACATCCTTCAACACACAGAATTTCAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR TCA 90 bp AATCCCAGGCATTCAAGAATACTTCTCTTCTGCTATTACAATGAATTACATGTGAACACCAGGCAGGAGTaGGAGGTCTGCCATAGCAAG +
Preference number: 4 (lower is better)
Translates to: NPRHSRILLFCYYNELHVNTRQE*EVCHSK
Trigger: CTTGCTATGGCAGACCTCTCACTCCTGCCTGGTGTT...CACATGTAATTCATTGTAATAGCAGAAGAGAAGTATTCTTGAATGCCTGGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS-3UTR TCA 90 bp GAAGAAGGAAAATGGACTTTAAAGAGAGTAGCATTTGGTTGGTGTTGCTGGCTGTCTGGCATTTATGCTTaGTTCTGGGAGCATGGACAA +
Preference number: 4 (lower is better)
Translates to: EEGKWTLKRVAFGWCCWLSGIYA*FWEHGQ
Trigger: TTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGA...CAGCCAGCAACACCAACCAAATGCTACTCTCTTTAAAGTCCATTTTCCTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp GGGGTTTCTTGGTGTGTGGTGAACTCTAGTTCTGAAGCAGGTTGTAATAAGCCAATGACGGGATGTGTATaGAAAACAGACATTCAGGAA +
Preference number: 4 (lower is better)
Translates to: GVSWCVVNSSSEAGCNKPMTGCV*KTDIQE
Trigger: TTCCTGAATGTCTGTTTTGCATACACATCCCGTCAT...TGGCTTATTACAACCTGCTTCAGAACTAGAGTTCACCACACACCAAGAAACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR GCA 90 bp AAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTAGAAGTGTTTGGTTCTaGTCAGTCCTGTTGTGTTAC +
Preference number: 4 (lower is better)
Translates to: KGFTDWLLNRRVWHLCLIRSVWF*SVLLCY
Trigger: GTAACACAACAGGACTGAGCAGAACCAAACACTTCT...AATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp GAAGAAGGAAAATGGACTTTAAAGAGAGTAGCATTTGGTTGGTGTTGCTGGCTGGTTGGAAGAAGTGTTTaGTTCTGCTCAGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: EEGKWTLKRVAFGWCCWLVGRSV*FCSVLL
Trigger: CAACAGGACTGAGCAGAACCAAACACTTCTTCCAAC...CAGCCAGCAACACCAACCAAATGCTACTCTCTTTAAAGTCCATTTTCCTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CCA 90 bp ATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAAGGCTAAAATGGAATTGATTCTGGGAGCATaGACAATAGCCAAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: IQGRAKSFVEAGWKAKMELILGA*TIAKKS
Trigger: AGACTTCTTGGCTATTGTCCATGCTCCCAGAATCAA...TTCCATTTTAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp AAAGTCATTCTTGGAAAAACACTACCAAAGGGCCAGGAGGGTATAATTTGTAAACTCTCACAGCATTGCTaGTCTCATGACGGGATGTGT +
Preference number: 4 (lower is better)
Translates to: KVILGKTLPKGQEGIICKLSQHC*SHDGMC
Trigger: ACACATCCCGTCATGAGATCAGCAATGCTGTGAGAG...TTTACAAATTATACCCTCCTGGCCCTTTGGTAGTGTTTTTCCAAGAATGACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR GCA 90 bp TTCATGAAAAGTCATTCTTGGAAAAACACTACCAAAGGGCCAGGAGGGTATAATCGGATACACACCCCATaGTTCTGCAGTTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: FMKSHSWKNTTKGPGGYNRIHTP*FCSFSF
Trigger: AAAGGAGAAACTGCAGAAGCATGGGGTGTGTATCCG...ATTATACCCTCCTGGCCCTTTGGTAGTGTTTTTCCAAGAATGACTTTTCATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR GCA 90 bp AATCCCAGGCATTCAAGAATACTTCTCTTCTGCTATTACAATGAATTACATGTGGGCCTGTACAGCTTGTaGAATCAGCTCCTGGAGATC +
Preference number: 4 (lower is better)
Translates to: NPRHSRILLFCYYNELHVGLYSL*NQLLEI
Trigger: GATCTCCAGGAGCTGATTGCACAAGCTGTACAGGCC...CACATGTAATTCATTGTAATAGCAGAAGAGAAGTATTCTTGAATGCCTGGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS-3UTR GCA 90 bp CTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTCCTTACCCAAATAACTaGCTGCCTATTAGTTATTTA +
Preference number: 4 (lower is better)
Translates to: LQTLLVTRPRFSVLVGDFPYPNN*LPISYL
Trigger: TAAATAACTAATAGGCAGGCAGTTATTTGGGTAAGG...AAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR GCA 90 bp AATCCCAGGCATTCAAGAATACTTCTCTTCTGCTATTACAATGAATTACATGTGTCGGGCTTGAACAGTTaGCGTAGAGCTCTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: NPRHSRILLFCYYNELHVSGLNS*RRALRL
Trigger: AAGACGGAGAGCTCTACGGCAACTGTTCAAGCCCGA...CACATGTAATTCATTGTAATAGCAGAAGAGAAGTATTCTTGAATGCCTGGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS-3UTR CCA 90 bp AATCCCAGGCATTCAAGAATACTTCTCTTCTGCTATTACAATGAATTACATGTGACGCTATGGTTCATCTaGAACTGCAGGATGGCCTCG +
Preference number: 4 (lower is better)
Translates to: NPRHSRILLFCYYNELHVTLWFI*NCRMAS
Trigger: CGAGGCCATCCTGCAGTTCCAGATGAACCATAGCGT...CACATGTAATTCATTGTAATAGCAGAAGAGAAGTATTCTTGAATGCCTGGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS-3UTR CCA 90 bp AATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGTAAAGCTGTAAAATTGCAGAAAGTAAAATaGGAAGTCTGGCATGGTGGC +
Preference number: 4 (lower is better)
Translates to: NSCLPNYGCQQPHCKAVKLQKVK*EVWHGG
Trigger: GCCACCATGCCAGACTTCCCATTTTACTTTCTGCAA...TTTTACAGCTTTACAATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR TCA 90 bp AATCCCAGGCATTCAAGAATACTTCTCTTCTGCTATTACAATGAATTACATGTGCTCTCACAGCATTGCTaGTCTCATGACGGGATGTGT +
Preference number: 4 (lower is better)
Translates to: NPRHSRILLFCYYNELHVLSQHC*SHDGMC
Trigger: ACACATCCCGTCATGAGATCAGCAATGCTGTGAGAG...CACATGTAATTCATTGTAATAGCAGAAGAGAAGTATTCTTGAATGCCTGGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS-3UTR GCA 90 bp AAAGTCATTCTTGGAAAAACACTACCAAAGGGCCAGGAGGGTATAATTTGTAAACACACCCCATGCTTCTaGAGTTTCTCCTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: KVILGKTLPKGQEGIICKHTPCF*SFSFSS
Trigger: GGAAGAAAAGGAGAAACTGCAGAAGCATGGGGTGTG...TTTACAAATTATACCCTCCTGGCCCTTTGGTAGTGTTTTTCCAAGAATGACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR GCA 90 bp TTCCCTGAAATTCTGTGTGTTGAAGGATGTGCTGGTGGAAAAAGAAAGTGCATCATGACGGGATGTGTATaGAAAACAGACATTCAGGAA +
Preference number: 4 (lower is better)
Translates to: FPEILCVEGCAGGKRKCIMTGCV*KTDIQE
Trigger: TTCCTGAATGTCTGTTTTGCATACACATCCCGTCAT...GATGCACTTTCTTTTTCCACCAGCACATCCTTCAACACACAGAATTTCAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR CCA 90 bp AATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGTAAAGCTGTAAAAAATGTGTTTCGGCATTaGGCCTGCCTTTATGATGTT +
Preference number: 4 (lower is better)
Translates to: NSCLPNYGCQQPHCKAVKNVFRH*ACLYDV
Trigger: AACATCATAAAGGCAGGCCCAATGCCGAAACACATT...TTTTACAGCTTTACAATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR CCA 90 bp AATCCCAGGCATTCAAGAATACTTCTCTTCTGCTATTACAATGAATTACATGTGTGTGCAATCAGCTCCTaGAGATCCAAGGGCAACAAG +
Preference number: 4 (lower is better)
Translates to: NPRHSRILLFCYYNELHVCAISS*RSKGNK
Trigger: CTTGTTGCCCTTGGATCTCCAGGAGCTGATTGCACA...CACATGTAATTCATTGTAATAGCAGAAGAGAAGTATTCTTGAATGCCTGGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS-3UTR CCA 90 bp TTCATGAAAAGTCATTCTTGGAAAAACACTACCAAAGGGCCAGGAGGGTATAATTGTTGTAGTTCTTCGTaGCCTGTACAGCTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: FMKSHSWKNTTKGPGGYNCCSSS*PVQLVQ
Trigger: TTGCACAAGCTGTACAGGCCACGAAGAACTACAACA...ATTATACCCTCCTGGCCCTTTGGTAGTGTTTTTCCAAGAATGACTTTTCATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR CCA 90 bp AAAGTCATTCTTGGAAAAACACTACCAAAGGGCCAGGAGGGTATAATTTGTAAAGCTTTGCTCTTTCTCTaGGGTTTCTTGGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: KVILGKTLPKGQEGIICKALLFL*GFLVCG
Trigger: ACCACACACCAAGAAACCCCAGAGAAAGAGCAAAGC...TTTACAAATTATACCCTCCTGGCCCTTTGGTAGTGTTTTTCCAAGAATGACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR TCA 90 bp AAAGTCATTCTTGGAAAAACACTACCAAAGGGCCAGGAGGGTATAATTTGTAAATTTCTTGGTGTGTGGTaGACTCTAGTTCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: KVILGKTLPKGQEGIICKFLGVW*TLVLKQ
Trigger: CTGCTTCAGAACTAGAGTTCACCACACACCAAGAAA...TTTACAAATTATACCCTCCTGGCCCTTTGGTAGTGTTTTTCCAAGAATGACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR CCA 90 bp AATCCCAGGCATTCAAGAATACTTCTCTTCTGCTATTACAATGAATTACATGTGACTCAGAGATATCACTaGGATCCAACAGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: NPRHSRILLFCYYNELHVTQRYH*DPTGLA
Trigger: AGCAAGGCCTGTTGGATCCCAGTGATATCTCTGAGT...CACATGTAATTCATTGTAATAGCAGAAGAGAAGTATTCTTGAATGCCTGGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS-3UTR TCA 90 bp AATCCCAGGCATTCAAGAATACTTCTCTTCTGCTATTACAATGAATTACATGTGGCATTGCTGATCTCATaGCGGGATGTGTATGCAAAA +
Preference number: 4 (lower is better)
Translates to: NPRHSRILLFCYYNELHVALLIS*RDVYAK
Trigger: TTTTGCATACACATCCCGTCATGAGATCAGCAATGC...CACATGTAATTCATTGTAATAGCAGAAGAGAAGTATTCTTGAATGCCTGGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS-3UTR CCA 90 bp AATCCCAGGCATTCAAGAATACTTCTCTTCTGCTATTACAATGAATTACATGTGTGTTGTAGTTCTTCGTaGCCTGTACAGCTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: NPRHSRILLFCYYNELHVCCSSS*PVQLVQ
Trigger: TTGCACAAGCTGTACAGGCCACGAAGAACTACAACA...CACATGTAATTCATTGTAATAGCAGAAGAGAAGTATTCTTGAATGCCTGGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS-3UTR CCA 90 bp AATCCCAGGCATTCAAGAATACTTCTCTTCTGCTATTACAATGAATTACATGTGGATGAGGAGAGCGGTTaGTATAGAGGCACTTATCAA +
Preference number: 4 (lower is better)
Translates to: NPRHSRILLFCYYNELHVDEESG*YRGTYQ
Trigger: TTGATAAGTGCCTCTATACCAACCGCTCTCCTCATC...CACATGTAATTCATTGTAATAGCAGAAGAGAAGTATTCTTGAATGCCTGGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS-3UTR CCA 90 bp AATCCCAGGCATTCAAGAATACTTCTCTTCTGCTATTACAATGAATTACATGTGCCAAAATGTATACTCTaGCCACAGAACGGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: NPRHSRILLFCYYNELHVPKCIL*PQNGLE
Trigger: TTCCAACCCGTTCTGTGGCCAGAGTATACATTTTGG...CACATGTAATTCATTGTAATAGCAGAAGAGAAGTATTCTTGAATGCCTGGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS-3UTR CCA 90 bp AATCCCAGGCATTCAAGAATACTTCTCTTCTGCTATTACAATGAATTACATGTGACAATGAATTACATGTaGAGCTATGAGGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: NPRHSRILLFCYYNELHVTMNYM*SYEDFG
Trigger: CCCGAAGTCCTCATAGCTCCACATGTAATTCATTGT...CACATGTAATTCATTGTAATAGCAGAAGAGAAGTATTCTTGAATGCCTGGGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS-3UTR GCA 90 bp AATCCCAGGCATTCAAGAATACTTCTCTTCTGCTATTACAATGAATTACATGTGATGACGGGATGTGTATaGAAAACAGACATTCAGGAA +
Preference number: 4 (lower is better)
Translates to: NPRHSRILLFCYYNELHVMTGCV*KTDIQE
Trigger: TTCCTGAATGTCTGTTTTGCATACACATCCCGTCAT...CACATGTAATTCATTGTAATAGCAGAAGAGAAGTATTCTTGAATGCCTGGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS-3UTR TCA 90 bp AATCCCAGGCATTCAAGAATACTTCTCTTCTGCTATTACAATGAATTACATGTGCTTCTGCTATTACAATaGATTACATGTGGAGCTATG +
Preference number: 4 (lower is better)
Translates to: NPRHSRILLFCYYNELHVLLLLQ*ITCGAM
Trigger: CATAGCTCCACATGTAATTCATTGTAATAGCAGAAG...CACATGTAATTCATTGTAATAGCAGAAGAGAAGTATTCTTGAATGCCTGGGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS-3UTR CAA 90 bp ACCTCTCTGCCTCTTCTTTCCACCACTACATCGCCTCCTGGGGCAGCTTCTCCCGGCGTCCCCACTGGCTaGGAGCCCCTCTCGCAGCAG +
Preference number: 5 (lower is better)
Translates to: TSLPLLSTTTSPPGAASPGVPTG*EPLSQQ
Trigger: CTGCTGCGAGAGGGGCTCCAAGCCAGTGGGGACGCC...GGGAGAAGCTGCCCCAGGAGGCGATGTAGTGGTGGAAAGAAGAGGCAGAGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp ACCTGCTCTCCAGGAACCCTGTGCCAGGGATTGGTAGAGGGGAGTGCCAGGTGTGGGGGCCAGTCTCATTaGGGAGTGGAGCCTGGCCCC +
Preference number: 5 (lower is better)
Translates to: TCSPGTLCQGLVEGSARCGGQSH*GVEPGP
Trigger: GGGGCCAGGCTCCACTCCCAAATGAGACTGGCCCCC...ACACCTGGCACTCCCCTCTACCAATCCCTGGCACAGGGTTCCTGGAGAGCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp TGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCAGGCAGGCGTCCCCACTGGCTaGGAGCCCCTCTCGCAGCAG +
Preference number: 5 (lower is better)
Translates to: CTRGRLSPSILLRSLSQAGVPTG*EPLSQQ
Trigger: CTGCTGCGAGAGGGGCTCCAAGCCAGTGGGGACGCC...TGCCTGGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CAA 90 bp AAGGCACTAATCCTCTCAGCAGCTCTGCAGCAAGTCCTGGCAGAGGGAGGTAAGGGCGTCCCCACTGGCTaGGAGCCCCTCTCGCAGCAG +
Preference number: 5 (lower is better)
Translates to: KALILSAALQQVLAEGGKGVPTG*EPLSQQ
Trigger: CTGCTGCGAGAGGGGCTCCAAGCCAGTGGGGACGCC...CTTACCTCCCTCTGCCAGGACTTGCTGCAGAGCTGCTGAGAGGATTAGTGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp ACCTGCTCTCCAGGAACCCTGTGCCAGGGATTGGTAGAGGGGAGTGCCAGGTGTGGCCTGCAGGAAGCCTaGGACTCGCTCTTCCCGTCT +
Preference number: 5 (lower is better)
Translates to: TCSPGTLCQGLVEGSARCGLQEA*DSLFPS
Trigger: AGACGGGAAGAGCGAGTCCAAGGCTTCCTGCAGGCC...ACACCTGGCACTCCCCTCTACCAATCCCTGGCACAGGGTTCCTGGAGAGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp AGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGTGGCCACAGAACGGGTaGGAACACCAGGCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: RSLSQAAQRYLWPANLAWWPQNG*EHQAGV
Trigger: CACTCCTGCCTGGTGTTCCAACCCGTTCTGTGGCCA...CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CAA 90 bp GGCTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTGGCGTCCCCACTGGCTaGGAGCCCCTCTCGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GSPAKQREHHSLSGKEVPGVPTG*EPLSQQ
Trigger: CTGCTGCGAGAGGGGCTCCAAGCCAGTGGGGACGCC...AGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CAA 90 bp CCAGGGCCTACAGGCCCTTCTGTTACCCTGAACCATGGAGGGGGCCAGTCTCATCGTCTGGCCGAGAGTTaGTGCAAGCGTGTCCTTCGG +
Preference number: 5 (lower is better)
Translates to: PGPTGPSVTLNHGGGQSHRLAES*CKRVLR
Trigger: CCGAAGGACACGCTTGCACAAACTCTCGGCCAGACG...ATGAGACTGGCCCCCTCCATGGTTCAGGGTAACAGAAGGGCCTGTAGGCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp GATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGGGGGGCCAGTCTCATTaGGGAGTGGAGCCTGGCCCC +
Preference number: 5 (lower is better)
Translates to: DGGFAKGFTDWLLNRRVWGGQSH*GVEPGP
Trigger: GGGGCCAGGCTCCACTCCCAAATGAGACTGGCCCCC...CCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp CCAGGGCCTACAGGCCCTTCTGTTACCCTGAACCATGGAGGGGGCCAGTCTCATCGTGGCCTGTACAGCTaGTGCAATCAGCTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: PGPTGPSVTLNHGGGQSHRGLYS*CNQLLE
Trigger: CTCCAGGAGCTGATTGCACAAGCTGTACAGGCCACG...ATGAGACTGGCCCCCTCCATGGTTCAGGGTAACAGAAGGGCCTGTAGGCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGGCGTCCCCACTGGCTaGGAGCCCCTCTCGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALGVPTG*EPLSQQ
Trigger: CTGCTGCGAGAGGGGCTCCAAGCCAGTGGGGACGCC...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS CCA 90 bp TGCCGTAGAGCTCTCCGTCTTGCTGGAAGGGCTTCTTCCAGGCCTTaGTCAGGAGGCTCCCTGGGTGCTGAAGCACGCTATGGTTCATCT +
Preference number: 5 (lower is better)
Translates to: CRRALRLAGRASSRP*SGGSLGAEARYGSS
Trigger: AGATGAACCATAGCGTGCTTCAGCACCCAGGGAGCCTCCTGACCAAGGCCTGGAAGAAGCCCTTCCAGCAAGACGGAGAGCTCTACGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS-3UTR CAA 90 bp CTCAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCGTCTCAGCTAGCTTGTaGAAGCCCTGTGAGTGGCCT +
Preference number: 5 (lower is better)
Translates to: LRSLSQAAQRYLWPANLAVSASL*KPCEWP
Trigger: AGGCCACTCACAGGGCTTCAACAAGCTAGCTGAGAC...GGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000525682.6
CDS-3UTR CAA 90 bp TACCCCAATCATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGGCGTCCCCACTGGCTaGGAGCCCCTCTCGCAGCAG +
Preference number: 5 (lower is better)
Translates to: YPNHITESQTQETGLNSHGVPTG*EPLSQQ
Trigger: CTGCTGCGAGAGGGGCTCCAAGCCAGTGGGGACGCC...GTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATATGATTGGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp TGGTTGGTGTTGCTGGCTGGTACTTGCCGGTGTGGGGCACCTGAAATAGAGTTGGGCCTGCAGGAAGCCTaGGACTCGCTCTTCCCGTCT +
Preference number: 5 (lower is better)
Translates to: WLVLLAGTCRCGAPEIELGLQEA*DSLFPS
Trigger: AGACGGGAAGAGCGAGTCCAAGGCTTCCTGCAGGCC...CAACTCTATTTCAGGTGCCCCACACCGGCAAGTACCAGCCAGCAACACCAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp CAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGAGCATTTGGTTGGTGTaGCTGGCTGGTACTTGCCGG +
Preference number: 5 (lower is better)
Translates to: QEPVPGSPKVSMASKPGLSIWLV*LAGTCR
Trigger: CCGGCAAGTACCAGCCAGCAACACCAACCAAATGCT...CAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp CGAGTTCTACTATTTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGCGTGGCCTGTACAGCTaGTGCAATCAGCTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: RVLLFCSPCCWATTTTSLRGLYS*CNQLLE
Trigger: CTCCAGGAGCTGATTGCACAAGCTGTACAGGCCACG...CAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp GGGCTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTGGCCACAGAACGGGTaGGAACACCAGGCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: GLPSQAKGTPFIIRKGGAWPQNG*EHQAGV
Trigger: CACTCCTGCCTGGTGTTCCAACCCGTTCTGTGGCCA...GGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CAA 90 bp GGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGGGTAGAGCCAAATCTTTaGTGGAAGCTGGGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: GACPRQPKGIYGQQTWPGVEPNL*WKLGGR
Trigger: CCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTAC...CCCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp AATCGCCCGCCTGGCTTCCGCGCACCATTGGGGGTGCTGAGTCTTTCAGTGAGCGAGAGTAGCATTTGGTaGGTGTTGCTGGCTGGTACT +
Preference number: 5 (lower is better)
Translates to: NRPPGFRAPLGVLSLSVSESSIW*VLLAGT
Trigger: AGTACCAGCCAGCAACACCAACCAAATGCTACTCTC...GCTCACTGAAAGACTCAGCACCCCCAATGGTGCGCGGAAGCCAGGCGGGCGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp CAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGACGAGTTCTACTATTTaGCAGCCCTTGCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: QEPVPGSPKVSMASKPGLTSSTI*QPLLLG
Trigger: GCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCGT...CAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp ACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCAGGCAGCCACGAGTTCTACTATTTaGCAGCCCTTGCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: TRGRLSPSILLRSLSQAATSSTI*QPLLLG
Trigger: GCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCGT...GGCTGCCTGGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp TTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCCGTCTGGCCGAGAGTTaGTGCAAGCGTGTCCTTCGG +
Preference number: 5 (lower is better)
Translates to: FSVLVGDFHPQSSSGACPRLAES*CKRVLR
Trigger: CCGAAGGACACGCTTGCACAAACTCTCGGCCAGACG...GGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CAA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGGCCTGCAGGAAGCCTaGGACTCGCTCTTCCCGTCT +
Preference number: 5 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALGLQEA*DSLFPS
Trigger: AGACGGGAAGAGCGAGTCCAAGGCTTCCTGCAGGCC...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CAA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGAGCCAGTCAGCTCGCTaGAGTTCCAAGGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWSQSAR*SSKACR
Trigger: CCTGCAGGCCTTGGAACTCAAGCGAGCTGACTGGCT...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CAA 90 bp ATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGCTCATAGGGCAGGCTTCCGCGCACCATaGGGGGTGCTGAGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: ITESQTQETGLNSHAHRAGFRAP*GVLSLS
Trigger: TGAAAGACTCAGCACCCCCAATGGTGCGCGGAAGCC...TGCCCTATGAGCGTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp CTCAGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCGAGAGTAGCATTTGGTaGGTGTTGCTGGCTGGTACT +
Preference number: 5 (lower is better)
Translates to: LRSLSQAAQRYLWPANLAESSIW*VLLAGT
Trigger: AGTACCAGCCAGCAACACCAACCAAATGCTACTCTC...GGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS TCA 90 bp CCTTCAGTTATCGCACGCCTAGTACTTCACGCCTCAGTGGTCTCCTaGTTATTCCCTCAGTCGTCCCTTTGCTTCTCCCGCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: PSVIARLVLHASVVS*LFPQSSLCFSRSCS
Trigger: GGAGCAGCTGCGGGAGAAGCAAAGGGACGACTGAGGGAATAATCAGGAGACCACTGAGGCGTGAAGTACTAGGCGTGCGATAACTGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000436153.6
ENST00000525165.5
ENST00000525326.5
ENST00000525546.5
ENST00000529688.5
ENST00000530781.5
CDS TCA 90 bp CTGACCAGAAGGCCAACCGGTGCTCTGGGCCATTGCTCACCTTTATaGTGTTGGCACAGAACCGCTCCCAAAGTGACAGCTCTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: LTRRPTGALGHCSPL*CWHRTAPKVTALLP
Trigger: AGGAAGGAGAGCTGTCACTTTGGGAGCGGTTCTGTGCCAACATCATAAAGGTGAGCAATGGCCCAGAGCACCGGTTGGCCTTCTGGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527611.1
CDS-3UTR CAA 90 bp AATCGCCCGCCTGGCTTCCGCGCACCATTGGGGGTGCTGAGTCTTTCAGTGAGCGACAGCTCTCCTTCCTaGATCCATGACATAGTTCTT +
Preference number: 5 (lower is better)
Translates to: NRPPGFRAPLGVLSLSVSDSSPS*IHDIVL
Trigger: AAGAACTATGTCATGGATCAAGGAAGGAGAGCTGTC...GCTCACTGAAAGACTCAGCACCCCCAATGGTGCGCGGAAGCCAGGCGGGCGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR CAA 90 bp ACCTCTGGCCAAGTACATGGCACAGAGGGGCTTTATGGTTTGGTACAGGCCTGCGTCTCAGCTAGCTTGTaGAAGCCCTGTGAGTGGCCT +
Preference number: 5 (lower is better)
Translates to: TSGQVHGTEGLYGLVQACVSASL*KPCEWP
Trigger: AGGCCACTCACAGGGCTTCAACAAGCTAGCTGAGAC...GCAGGCCTGTACCAAACCATAAAGCCCCTCTGTGCCATGTACTTGGCCAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR CAA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGTGGCCACAGAACGGGTaGGAACACCAGGCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALWPQNG*EHQAGV
Trigger: CACTCCTGCCTGGTGTTCCAACCCGTTCTGTGGCCA...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CAA 90 bp ATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGCTCATAGGGCGTCTGGCCGAGAGTTaGTGCAAGCGTGTCCTTCGG +
Preference number: 5 (lower is better)
Translates to: ILRKVRPRRQDSTATLIGRLAES*CKRVLR
Trigger: CCGAAGGACACGCTTGCACAAACTCTCGGCCAGACG...CCCTATGAGCGTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp GACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCGTCTGGCCGAGAGTTaGTGCAAGCGTGTCCTTCGG +
Preference number: 5 (lower is better)
Translates to: DLGLVYSWETFTLNPPQERLAES*CKRVLR
Trigger: CCGAAGGACACGCTTGCACAAACTCTCGGCCAGACG...CTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCTAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CAA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGCGTCTGGCCGAGAGTTaGTGCAAGCGTGTCCTTCGG +
Preference number: 5 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALRLAES*CKRVLR
Trigger: CCGAAGGACACGCTTGCACAAACTCTCGGCCAGACG...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CAA 90 bp CTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTTGGCCTGCAGGAAGCCTaGGACTCGCTCTTCCCGTCT +
Preference number: 5 (lower is better)
Translates to: LPSQAKGTPFIIRKGGAFGLQEA*DSLFPS
Trigger: AGACGGGAAGAGCGAGTCCAAGGCTTCCTGCAGGCC...AAAGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CAA 90 bp TTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGCCTCTTCTTTCCAGTAGAGCCAAATCTTTaGTGGAAGCTGGGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: FAALAAGRRRRPLCLFFPVEPNL*WKLGGR
Trigger: CCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTAC...TGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp CTCAGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCGGCTTCCGCGCACCATaGGGGGTGCTGAGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: LRPKRDASPINHLYCTPIGFRAP*GVLSLS
Trigger: TGAAAGACTCAGCACCCCCAATGGTGCGCGGAAGCC...GATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp CTCTTCAAAGGCACTAATCCTCTCAGCAGCTCTGCAGCAAGTCCTGGCAGAGGGTTCTGCTCAGTCCTGTaGTGTTACAGGGGAGGCCTG +
Preference number: 5 (lower is better)
Translates to: LFKGTNPLSSSAASPGRGFCSVL*CYRGGL
Trigger: CAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAA...CCCTCTGCCAGGACTTGCTGCAGAGCTGCTGAGAGGATTAGTGCCTTTGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp GGCTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTGTCTCAGCTAGCTTGTaGAAGCCCTGTGAGTGGCCT +
Preference number: 5 (lower is better)
Translates to: GSPAKQREHHSLSGKEVPVSASL*KPCEWP
Trigger: AGGCCACTCACAGGGCTTCAACAAGCTAGCTGAGAC...AGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000525682.6
CDS-3UTR CAA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGCGTGGCCTGTACAGCTaGTGCAATCAGCTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALRGLYS*CNQLLE
Trigger: CTCCAGGAGCTGATTGCACAAGCTGTACAGGCCACG...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CAA 90 bp CCATTCATTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGGGCCTGCAGGAAGCCTaGGACTCGCTCTTCCCGTCT +
Preference number: 5 (lower is better)
Translates to: PFIIRKGGAFHQEKEGEWGLQEA*DSLFPS
Trigger: AGACGGGAAGAGCGAGTCCAAGGCTTCCTGCAGGCC...CCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAATGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CAA 90 bp TCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTTCAGCCAGTCAGCTCGCTaGAGTTCCAAGGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SPAKQREHHSLSGKEVPFSQSAR*SSKACR
Trigger: CCTGCAGGCCTTGGAACTCAAGCGAGCTGACTGGCT...GAAAGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CAA 90 bp CTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTTAGCCAGTCAGCTCGCTaGAGTTCCAAGGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LPSQAKGTPFIIRKGGAFSQSAR*SSKACR
Trigger: CCTGCAGGCCTTGGAACTCAAGCGAGCTGACTGGCT...AAAGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CAA 90 bp AGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGCTGAAATTCTGTGTGTaGAAGGATGTGCTGGTGGAA +
Preference number: 5 (lower is better)
Translates to: RSLSQAAQRYLWPANLAWLKFCV*KDVLVE
Trigger: TTCCACCAGCACATCCTTCAACACACAGAATTTCAG...CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp GAAGAAGTGTTTGGTTCTGCTCAGTCCTGTTGTGTTACAGGGGAGGCCTGTGCTACTATTTTGCAGCCCTaGCTGCTGGGCGACGACGAC +
Preference number: 5 (lower is better)
Translates to: EEVFGSAQSCCVTGEACATILQP*LLGDDD
Trigger: GTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGT...AGCACAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAACCAAACACTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp ATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGCTCATAGGGACTATTTTGCAGCCCTaGCTGCTGGGCGACGACGAC +
Preference number: 5 (lower is better)
Translates to: ILRKVRPRRQDSTATLIGTILQP*LLGDDD
Trigger: GTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGT...CCCTATGAGCGTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp AATCGCCCGCCTGGCTTCCGCGCACCATTGGGGGTGCTGAGTCTTTCAGTGAGCTGGAAGGACACTAAATaGGTCCCATCTGATTTCTTG +
Preference number: 5 (lower is better)
Translates to: NRPPGFRAPLGVLSLSVSWKDTK*VPSDFL
Trigger: CAAGAAATCAGATGGGACCAATTTAGTGTCCTTCCA...GCTCACTGAAAGACTCAGCACCCCCAATGGTGCGCGGAAGCCAGGCGGGCGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS CCA 90 bp TCCCTGGGTGCTGAAGCACGCTATGGTTCATCTGGAACTGCAGGATaGCCTCGAAGAGGTTCCAAAATGTATACTCTGGCCACAGAACGG +
Preference number: 5 (lower is better)
Translates to: SLGAEARYGSSGTAG*PRRGSKMYTLATER
Trigger: CCGTTCTGTGGCCAGAGTATACATTTTGGAACCTCTTCGAGGCCATCCTGCAGTTCCAGATGAACCATAGCGTGCTTCAGCACCCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS-3UTR CAA 90 bp AGGGAGCCAGGTCAAAAAGCTGAGAGAAACCTCGAAGAGTGGAGTGGGAATCAGGTCTCAGCTAGCTTGTaGAAGCCCTGTGAGTGGCCT +
Preference number: 5 (lower is better)
Translates to: REPGQKAERNLEEWSGNQVSASL*KPCEWP
Trigger: AGGCCACTCACAGGGCTTCAACAAGCTAGCTGAGAC...CTGATTCCCACTCCACTCTTCGAGGTTTCTCTCAGCTTTTTGACCTGGCTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236342.12
ENST00000360009.6
CDS-3UTR CAA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGTCTCAGCTAGCTTGTaGAAGCCCTGTGAGTGGCCT +
Preference number: 5 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALVSASL*KPCEWP
Trigger: AGGCCACTCACAGGGCTTCAACAAGCTAGCTGAGAC...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CAA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGAGAGTCTCAGCTAGCTaGTTGAAGCCCTGTGAGTGG +
Preference number: 5 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWRVSAS*LKPCEW
Trigger: CCACTCACAGGGCTTCAACAAGCTAGCTGAGACTCT...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CAA 90 bp TTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCAGAGTCTCAGCTAGCTaGTTGAAGCCCTGTGAGTGG +
Preference number: 5 (lower is better)
Translates to: FSVLVGDFHPQSSSGACPRVSAS*LKPCEW
Trigger: CCACTCACAGGGCTTCAACAAGCTAGCTGAGACTCT...GGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000525682.6
CDS-3UTR CAA 90 bp CCAGGGCCTACAGGCCCTTCTGTTACCCTGAACCATGGAGGGGGCCAGTCTCATTCACTCTTGGAGCGTTaGAAGTTCTCAATGCTGAAT +
Preference number: 5 (lower is better)
Translates to: PGPTGPSVTLNHGGGQSHSLLER*KFSMLN
Trigger: ATTCAGCATTGAGAACTTCAAACGCTCCAAGAGTGA...ATGAGACTGGCCCCCTCCATGGTTCAGGGTAACAGAAGGGCCTGTAGGCCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR CAA 90 bp AGGAGCCTGTCCCAGGCAGCCCAAAGGTATCTATGGCCAGCAAACCTGGCCTGGTCACTCTTGGAGCGTTaGAAGTTCTCAATGCTGAAT +
Preference number: 5 (lower is better)
Translates to: RSLSQAAQRYLWPANLAWSLLER*KFSMLN
Trigger: ATTCAGCATTGAGAACTTCAAACGCTCCAAGAGTGA...CCAGGCCAGGTTTGCTGGCCATAGATACCTTTGGGCTGCCTGGGACAGGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CAA 90 bp AGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCATATGGCCACAGAACGGGTaGGAACACCAGGCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: RPKRDASPINHLYCTPIIWPQNG*EHQAGV
Trigger: CACTCCTGCCTGGTGTTCCAACCCGTTCTGTGGCCA...TATGATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR CAA 90 bp GCTTTGACCCTCACAAGCAGAGGACCTAGAACAAGCTTTGCCATGCCAAGAATACGTCTGGCCGAGAGTTaGTGCAAGCGTGTCCTTCGG +
Preference number: 5 (lower is better)
Translates to: ALTLTSRGPRTSFAMPRIRLAES*CKRVLR
Trigger: CCGAAGGACACGCTTGCACAAACTCTCGGCCAGACG...TATTCTTGGCATGGCAAAGCTTGTTCTAGGTCCTCTGCTTGTGAGGGTCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp CTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTAGCCAGTCAGCTCGCTaGAGTTCCAAGGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LQTLLVTRPRFSVLVGDFSQSAR*SSKACR
Trigger: CCTGCAGGCCTTGGAACTCAAGCGAGCTGACTGGCT...AAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp GCTTTGACCCTCACAAGCAGAGGACCTAGAACAAGCTTTGCCATGCCAAGAATAGGCTTCCGCGCACCATaGGGGGTGCTGAGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: ALTLTSRGPRTSFAMPRIGFRAP*GVLSLS
Trigger: TGAAAGACTCAGCACCCCCAATGGTGCGCGGAAGCC...TATTCTTGGCATGGCAAAGCTTGTTCTAGGTCCTCTGCTTGTGAGGGTCAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp GAAGAAGGAAAATGGACTTTAAAGAGAGTAGCATTTGGTTGGTGTTGCTGGCTGGGGGGCCAGTCTCATTaGGGAGTGGAGCCTGGCCCC +
Preference number: 5 (lower is better)
Translates to: EEGKWTLKRVAFGWCCWLGGQSH*GVEPGP
Trigger: GGGGCCAGGCTCCACTCCCAAATGAGACTGGCCCCC...CAGCCAGCAACACCAACCAAATGCTACTCTCTTTAAAGTCCATTTTCCTTCTTC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp GGCTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTGGAAAGGACACAGCTTaGACCCTCACAAGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: GSPAKQREHHSLSGKEVPGKDTA*TLTSRG
Trigger: TCCTCTGCTTGTGAGGGTCAAAGCTGTGTCCTTTCC...AGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp TGGCCCTTTGCTCTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCACTATTTTGCAGCCCTaGCTGCTGGGCGACGACGAC +
Preference number: 5 (lower is better)
Translates to: WPFALQTLLVTRPRFSVLTILQP*LLGDDD
Trigger: GTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGT...GAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAGAGCAAAGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp CGAGTTCTACTATTTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGTTCTTGAGGCAAGGGTaGAACCTGGCTTGCACAAAT +
Preference number: 5 (lower is better)
Translates to: RVLLFCSPCCWATTTTSLFLRQG*NLACTN
Trigger: ATTTGTGCAAGCCAGGTTCAACCCTTGCCTCAAGAA...CAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS GCA 90 bp CCTCTGATAGCATCTTACTTTTCTTCCATCAAGCGGCTGAACTTCTaGCGGGCCAGATCCATAAGCCCGTCTACCTCACTCTTGGAGCGT +
Preference number: 5 (lower is better)
Translates to: PLIASYFSSIKRLNF*RARSISPSTSLLER
Trigger: ACGCTCCAAGAGTGAGGTAGACGGGCTTATGGATCTGGCCCGGCAGAAGTTCAGCCGCTTGATGGAAGAAAAGTAAGATGCTATCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374186.7
CDS GCA 90 bp CAGACATTCAGGAAACACTTTTCTTCCATCAAGCGGCTGAACTTCTaGCGGGCCAGATCCATAAGCCCGTCTACCTCACTCTTGGAGCGT +
Preference number: 5 (lower is better)
Translates to: QTFRKHFSSIKRLNF*RARSISPSTSLLER
Trigger: ACGCTCCAAGAGTGAGGTAGACGGGCTTATGGATCTGGCCCGGCAGAAGTTCAGCCGCTTGATGGAAGAAAAGTGTTTCCTGAATGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430232.5
ENST00000526219.5
CDS-3UTR CAA 90 bp AGGGAGCCAGGTCAAAAAGCTGAGAGAAACCTCGAAGAGTGGAGTGGGAATCAGCCTGCCTTTATGATGTaGGCACAGAACCGCTCCCAA +
Preference number: 5 (lower is better)
Translates to: REPGQKAERNLEEWSGNQPAFMM*AQNRSQ
Trigger: TTGGGAGCGGTTCTGTGCCAACATCATAAAGGCAGG...CTGATTCCCACTCCACTCTTCGAGGTTTCTCTCAGCTTTTTGACCTGGCTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR CAA 90 bp GACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGCCTTTATGATGTaGGCACAGAACCGCTCCCAA +
Preference number: 5 (lower is better)
Translates to: DLGLVYSWETFTLNPPQEPAFMM*AQNRSQ
Trigger: TTGGGAGCGGTTCTGTGCCAACATCATAAAGGCAGG...CTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCTAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CAA 90 bp AGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCTGCCTTTATGATGTaGGCACAGAACCGCTCCCAA +
Preference number: 5 (lower is better)
Translates to: RFSVLVGDFHPQSSSGACPAFMM*AQNRSQ
Trigger: TTGGGAGCGGTTCTGTGCCAACATCATAAAGGCAGG...ACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CAA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGCCTGCCTTTATGATGTaGGCACAGAACCGCTCCCAA +
Preference number: 5 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALPAFMM*AQNRSQ
Trigger: TTGGGAGCGGTTCTGTGCCAACATCATAAAGGCAGG...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CAA 90 bp AAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTCTCGGCCTGCAGGAAGCCTaGGACTCGCTCTTCCCGTCT +
Preference number: 5 (lower is better)
Translates to: KVRGFLCALATTCKISPLGLQEA*DSLFPS
Trigger: AGACGGGAAGAGCGAGTCCAAGGCTTCCTGCAGGCC...GAGAGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp AAAATGTATACTCTGGCCACAGAACGGGTTGGAACACCAGGCAGGAGTGAGAGGGAGGAGGAGAAAAGCTaGTGTGGGCTGAGTCGACAA +
Preference number: 5 (lower is better)
Translates to: KMYTLATERVGTPGRSEREEEKS*CGLSRQ
Trigger: TTGTCGACTCAGCCCACACAAGCTTTTCTCCTCCTC...CCTCTCACTCCTGCCTGGTGTTCCAACCCGTTCTGTGGCCAGAGTATACATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS-3UTR CAA 90 bp CTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTTTTCTGCTCAGTCCTGTaGTGTTACAGGGGAGGCCTG +
Preference number: 5 (lower is better)
Translates to: LPSQAKGTPFIIRKGGAFFCSVL*CYRGGL
Trigger: CAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAA...AAAGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGGAGAGTAGCATTTGGTaGGTGTTGCTGGCTGGTACT +
Preference number: 5 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWESSIW*VLLAGT
Trigger: AGTACCAGCCAGCAACACCAACCAAATGCTACTCTC...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp TTTGCAGCCCTTGCTGCTGGGCGACGACGACGACCTCTCTGCCTCTTCTTTCCAGTTTCCTGTGTGCTCTaGCTACAACTTGCAAGATTT +
Preference number: 5 (lower is better)
Translates to: FAALAAGRRRRPLCLFFPVSCVL*LQLARF
Trigger: AAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAAC...TGGAAAGAAGAGGCAGAGAGGTCGTCGTCGTCGCCCAGCAGCAAGGGCTGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp ACCTCTCTGCCTCTTCTTTCCACCACTACATCGCCTCCTGGGGCAGCTTCTCCCGTTTCCTGTGTGCTCTaGCTACAACTTGCAAGATTT +
Preference number: 5 (lower is better)
Translates to: TSLPLLSTTTSPPGAASPVSCVL*LQLARF
Trigger: AAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAAC...GGGAGAAGCTGCCCCAGGAGGCGATGTAGTGGTGGAAAGAAGAGGCAGAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp GAAGAAGTGTTTGGTTCTGCTCAGTCCTGTTGTGTTACAGGGGAGGCCTGTGCTACGAGTTCTACTATTTaGCAGCCCTTGCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: EEVFGSAQSCCVTGEACATSSTI*QPLLLG
Trigger: GCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCGT...AGCACAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAACCAAACACTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp GATTCTGGGAGCATGGACAATAGCCAAGAAGTCTCTTGCCGCCAGGTATCCCGGTTCTTGAGGCAAGGGTaGAACCTGGCTTGCACAAAT +
Preference number: 5 (lower is better)
Translates to: DSGSMDNSQEVSCRQVSRFLRQG*NLACTN
Trigger: ATTTGTGCAAGCCAGGTTCAACCCTTGCCTCAAGAA...CCGGGATACCTGGCGGCAAGAGACTTCTTGGCTATTGTCCATGCTCCCAGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp GGGCTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTCTTGAGGCAAGGGTaGAACCTGGCTTGCACAAAT +
Preference number: 5 (lower is better)
Translates to: GLPSQAKGTPFIIRKGGAFLRQG*NLACTN
Trigger: ATTTGTGCAAGCCAGGTTCAACCCTTGCCTCAAGAA...GGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGGTCCCATCTGATTTCTaGAGGCAAGGGTTGAACCTG +
Preference number: 5 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWVPSDF*RQGLNL
Trigger: CAGGTTCAACCCTTGCCTCAAGAAATCAGATGGGAC...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp CCTCGAAGAGGTTCCAAAATGTATACTCTGGCCACAGAACGGGTTGGAACACCAAGGAGCTCAGCTAGCTaGTTGAAGCCCTGTGAGTGG +
Preference number: 5 (lower is better)
Translates to: PRRGSKMYTLATERVGTPRSSAS*LKPCEW
Trigger: CCACTCACAGGGCTTCAACAAGCTAGCTGAGCTCCT...TGGTGTTCCAACCCGTTCTGTGGCCAGAGTATACATTTTGGAACCTCTTCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS GCA 90 bp CACCTGGCACTTCTTGGCATAGCGACGGTTCCCGTCCATTATGAATaGAATGTGTTTCGGCATTGGGCCTGCCTTTATGATGTTGGCACA +
Preference number: 5 (lower is better)
Translates to: HLALLGIATVPVHYE*NVFRHWACLYDVGT
Trigger: TGTGCCAACATCATAAAGGCAGGCCCAATGCCGAAACACATTGCATTCATAATGGACGGGAACCGTCGCTATGCCAAGAAGTGCCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000374185.7
ENST00000374186.7
ENST00000427245.6
ENST00000430232.5
ENST00000434391.6
ENST00000436153.6
ENST00000487944.5
ENST00000525165.5
ENST00000525326.5
ENST00000525410.1
ENST00000525546.5
ENST00000525682.6
ENST00000526219.5
ENST00000526278.5
ENST00000528557.5
ENST00000529688.5
ENST00000530781.5
ENST00000531312.5
ENST00000531955.5
ENST00000533087.5
CDS-3UTR CAA 90 bp ACCTCTGGCCAAGTACATGGCACAGAGGGGCTTTATGGTTTGGTACAGGCCTGCGACAGCTCTCCTTCCTaGATCCATGACATAGTTCTT +
Preference number: 5 (lower is better)
Translates to: TSGQVHGTEGLYGLVQACDSSPS*IHDIVL
Trigger: AAGAACTATGTCATGGATCAAGGAAGGAGAGCTGTC...GCAGGCCTGTACCAAACCATAAAGCCCCTCTGTGCCATGTACTTGGCCAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR CAA 90 bp CATTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCCCGTCTACCTCACTCTaGGAGCGTTTGAAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: HYQERRCLSPRKGRGVEPPSTSL*ERLKFS
Trigger: TGAGAACTTCAAACGCTCCAAGAGTGAGGTAGACGG...GGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CAA 90 bp AAAATGTATACTCTGGCCACAGAACGGGTTGGAACACCAGGCAGGAGTGAGAGGCCGTCTACCTCACTCTaGGAGCGTTTGAAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: KMYTLATERVGTPGRSERPSTSL*ERLKFS
Trigger: TGAGAACTTCAAACGCTCCAAGAGTGAGGTAGACGG...CCTCTCACTCCTGCCTGGTGTTCCAACCCGTTCTGTGGCCAGAGTATACATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS-3UTR CAA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGCCGTCTACCTCACTCTaGGAGCGTTTGAAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALPSTSL*ERLKFS
Trigger: TGAGAACTTCAAACGCTCCAAGAGTGAGGTAGACGG...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CAA 90 bp AAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTAGCCAGTCAGCTCGCTaGAGTTCCAAGGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: KGFTDWLLNRRVWHLCLISQSAR*SSKACR
Trigger: CCTGCAGGCCTTGGAACTCAAGCGAGCTGACTGGCT...AATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp AGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTGTAGAGCCAAATCTTTaGTGGAAGCTGGGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: RFSVLVGDFHPQSSSGACVEPNL*WKLGGR
Trigger: CCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTAC...ACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp CTCCCCAGCCAAGCAAAGGGAACACCATTCATTATCAGGAAAGGAGGTGCCTTTGAGGAGGAGAAAAGCTaGTGTGGGCTGAGTCGACAA +
Preference number: 5 (lower is better)
Translates to: LPSQAKGTPFIIRKGGAFEEEKS*CGLSRQ
Trigger: TTGTCGACTCAGCCCACACAAGCTTTTCTCCTCCTC...AAAGGCACCTCCTTTCCTGATAATGAATGGTGTTCCCTTTGCTTGGCTGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp GGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGAGCATTTGGTTGGTGTaGCTGGCTGGTACTTGCCGG +
Preference number: 5 (lower is better)
Translates to: GFTDWLLNRRVWHLCLILSIWLV*LAGTCR
Trigger: CCGGCAAGTACCAGCCAGCAACACCAACCAAATGCT...CAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGAGAGTAGCATTTGGTaGGTGTTGCTGGCTGGTACT +
Preference number: 5 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALESSIW*VLLAGT
Trigger: AGTACCAGCCAGCAACACCAACCAAATGCTACTCTC...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp TGGCCCTTTGCTCTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCAGGGTTGAACCTGGCTaGCACAAATCACACCTGTCC +
Preference number: 5 (lower is better)
Translates to: WPFALQTLLVTRPRFSVLRVEPG*HKSHLS
Trigger: GGACAGGTGTGATTTGTGCAAGCCAGGTTCAACCCT...GAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAGAGCAAAGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp TATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGTTCTTGAGGCAAGGGTaGAACCTGGCTTGCACAAAT +
Preference number: 5 (lower is better)
Translates to: YQERRCLSPRKGRGVEPWFLRQG*NLACTN
Trigger: ATTTGTGCAAGCCAGGTTCAACCCTTGCCTCAAGAA...CCAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp CTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTCCTGCCTTTATGATGTaGGCACAGAACCGCTCCCAA +
Preference number: 5 (lower is better)
Translates to: LQTLLVTRPRFSVLVGDFPAFMM*AQNRSQ
Trigger: TTGGGAGCGGTTCTGTGCCAACATCATAAAGGCAGG...AAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR CAA 90 bp AAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCGTGGCCTGTACAGCTaGTGCAATCAGCTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: KGFTDWLLNRRVWHLCLIRGLYS*CNQLLE
Trigger: CTCCAGGAGCTGATTGCACAAGCTGTACAGGCCACG...AATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp TTATTTACTAGCAGATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGATGGCCACAGAACGGGTaGGAACACCAGGCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: LFTSRSKVEPNLLWKLGGWPQNG*EHQAGV
Trigger: CACTCCTGCCTGGTGTTCCAACCCGTTCTGTGGCCA...TCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGATCTGCTAGTAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR CAA 90 bp CCTCCAGCCCCTCATTCCCGCCTTAATTGTAGGGCTCTGCATTATAGCCGCATACTGAAATTCTGTGTGTaGAAGGATGTGCTGGTGGAA +
Preference number: 5 (lower is better)
Translates to: PPAPHSRLNCRALHYSRILKFCV*KDVLVE
Trigger: TTCCACCAGCACATCCTTCAACACACAGAATTTCAG...TATGCGGCTATAATGCAGAGCCCTACAATTAAGGCGGGAATGAGGGGCTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp TGCACAAATCACACCTGTCCAAAGCAACCACGAGTTCTACTATTTTGCAGCCCTTTCTGCTCAGTCCTGTaGTGTTACAGGGGAGGCCTG +
Preference number: 5 (lower is better)
Translates to: CTNHTCPKQPRVLLFCSPFCSVL*CYRGGL
Trigger: CAGGCCTCCCCTGTAACACAACAGGACTGAGCAGAA...AGGGCTGCAAAATAGTAGAACTCGTGGTTGCTTTGGACAGGTGTGATTTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp CCATTCATTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGGGAAAGGACACAGCTTaGACCCTCACAAGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: PFIIRKGGAFHQEKEGEWGKDTA*TLTSRG
Trigger: TCCTCTGCTTGTGAGGGTCAAAGCTGTGTCCTTTCC...CCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAATGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGTGCTCTTGCTACAACTaGCAAGATTTCACCTCTCCC +
Preference number: 5 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALCSCYN*QDFTSP
Trigger: GGGAGAGGTGAAATCTTGCAAGTTGTAGCAAGAGCA...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp GCTTTGACCCTCACAAGCAGAGGACCTAGAACAAGCTTTGCCATGCCAAGAATAGTGTGGATGGGGGCTTaGCCAAAGGGTTCACTGATT +
Preference number: 5 (lower is better)
Translates to: ALTLTSRGPRTSFAMPRIVWMGA*PKGSLI
Trigger: AATCAGTGAACCCTTTGGCAAAGCCCCCATCCACAC...TATTCTTGGCATGGCAAAGCTTGTTCTAGGTCCTCTGCTTGTGAGGGTCAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp CATTATAGCCGCATAATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTACTATTTTGCAGCCCTaGCTGCTGGGCGACGACGAC +
Preference number: 5 (lower is better)
Translates to: HYSRIIHASLIMAVNSPITILQP*LLGDDD
Trigger: GTCGTCGTCGCCCAGCAGCAAGGGCTGCAAAATAGT...AATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATTATGCGGCTATAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp CCATTCATTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGACGAGTTCTACTATTTaGCAGCCCTTGCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: PFIIRKGGAFHQEKEGEWTSSTI*QPLLLG
Trigger: GCCCAGCAGCAAGGGCTGCAAAATAGTAGAACTCGT...CCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAATGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp GGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGAGGGTTGAACCTGGCTaGCACAAATCACACCTGTCC +
Preference number: 5 (lower is better)
Translates to: GFTDWLLNRRVWHLCLILRVEPG*HKSHLS
Trigger: GGACAGGTGTGATTTGTGCAAGCCAGGTTCAACCCT...CAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp GATGGGGGCTTTGCCAAAGGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGTGGAAGGACACTAAATaGGTCCCATCTGATTTCTTG +
Preference number: 5 (lower is better)
Translates to: DGGFAKGFTDWLLNRRVWWKDTK*VPSDFL
Trigger: CAAGAAATCAGATGGGACCAATTTAGTGTCCTTCCA...CCAGACACGGCGATTGAGAAGCCAATCAGTGAACCCTTTGGCAAAGCCCCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp AGATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAAGGCTAAAATGGAGCTCAGCTAGCTTGTaGAAGCCCTGTGAGTGGCCT +
Preference number: 5 (lower is better)
Translates to: RSKVEPNLLWKLGGRLKWSSASL*KPCEWP
Trigger: AGGCCACTCACAGGGCTTCAACAAGCTAGCTGAGCT...CCATTTTAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS-3UTR CAA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGGACAGCTCTCCTTCCTaGATCCATGACATAGTTCTT +
Preference number: 5 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALDSSPS*IHDIVL
Trigger: AAGAACTATGTCATGGATCAAGGAAGGAGAGCTGTC...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CAA 90 bp GGGGTTTCTTGGTGTGTGGTGAACTCTAGTTCTGAAGCAGGTTGTAATAAGCCACCTGCCTTTATGATGTaGGCACAGAACCGCTCCCAA +
Preference number: 5 (lower is better)
Translates to: GVSWCVVNSSSEAGCNKPPAFMM*AQNRSQ
Trigger: TTGGGAGCGGTTCTGTGCCAACATCATAAAGGCAGG...TGGCTTATTACAACCTGCTTCAGAACTAGAGTTCACCACACACCAAGAAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR CAA 90 bp TTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGCCTGTCCCTCACTCTTGGAGCGTTaGAAGTTCTCAATGCTGAAT +
Preference number: 5 (lower is better)
Translates to: FSVLVGDFHPQSSSGACPSLLER*KFSMLN
Trigger: ATTCAGCATTGAGAACTTCAAACGCTCCAAGAGTGA...GGGACAGGCTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CAA 90 bp AGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCATACCGTCTACCTCACTCTaGGAGCGTTTGAAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: RPKRDASPINHLYCTPIIPSTSL*ERLKFS
Trigger: TGAGAACTTCAAACGCTCCAAGAGTGAGGTAGACGG...TATGATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR CAA 90 bp CCATTCATTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGCCGTCTACCTCACTCTaGGAGCGTTTGAAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: PFIIRKGGAFHQEKEGEWPSTSL*ERLKFS
Trigger: TGAGAACTTCAAACGCTCCAAGAGTGAGGTAGACGG...CCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAATGAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
CDS-3UTR CAA 90 bp AATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGTAAAGCTGTAAAAAGCCAGTCAGCTCGCTaGAGTTCCAAGGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: NSCLPNYGCQQPHCKAVKSQSAR*SSKACR
Trigger: CCTGCAGGCCTTGGAACTCAAGCGAGCTGACTGGCT...TTTTACAGCTTTACAATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp AGATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAAGGCTAAAATGGGAGGAGGAGAAAAGCTaGTGTGGGCTGAGTCGACAA +
Preference number: 5 (lower is better)
Translates to: RSKVEPNLLWKLGGRLKWEEEKS*CGLSRQ
Trigger: TTGTCGACTCAGCCCACACAAGCTTTTCTCCTCCTC...CCATTTTAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp ATGTCCTCAAATGGGGGCTTGGCTCACAGGTGGAAGGACACTAAATTGGTCCCAAGTTGGAAGAAGTGTTaGGTTCTGCTCAGTCCTGTT +
Preference number: 5 (lower is better)
Translates to: MSSNGGLAHRWKDTKLVPSWKKC*VLLSPV
Trigger: AACAGGACTGAGCAGAACCAAACACTTCTTCCAACT...TGGGACCAATTTAGTGTCCTTCCACCTGTGAGCCAAGCCCCCATTTGAGGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp GACCTAGGTTTAGTGTACTCGTGGGAGACTTTCACCCTCAATCCTCCTCAGGAGAGTTGGAAGAAGTGTTaGGTTCTGCTCAGTCCTGTT +
Preference number: 5 (lower is better)
Translates to: DLGLVYSWETFTLNPPQESWKKC*VLLSPV
Trigger: AACAGGACTGAGCAGAACCAAACACTTCTTCCAACT...CTCCTGAGGAGGATTGAGGGTGAAAGTCTCCCACGAGTACACTAAACCTAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp TGGCCCTTTGCTCTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCTGCTCTTGCTACAACTaGCAAGATTTCACCTCTCCC +
Preference number: 5 (lower is better)
Translates to: WPFALQTLLVTRPRFSVLCSCYN*QDFTSP
Trigger: GGGAGAGGTGAAATCTTGCAAGTTGTAGCAAGAGCA...GAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAGAGCAAAGGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp GAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCATATTACGGAAAGGTGTGGATGGGGGCTTaGCCAAAGGGTTCACTGATT +
Preference number: 5 (lower is better)
Translates to: EMPAPLITSTVPQSYYGKVWMGA*PKGSLI
Trigger: AATCAGTGAACCCTTTGGCAAAGCCCCCATCCACAC...CTTTCCGTAATATGATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp CTCCAAACCCTATTGGTGACCAGACCTAGGTTTAGTGTACTCGTGGGAGACTTTGTCCCATCTGATTTCTaGAGGCAAGGGTTGAACCTG +
Preference number: 5 (lower is better)
Translates to: LQTLLVTRPRFSVLVGDFVPSDF*RQGLNL
Trigger: CAGGTTCAACCCTTGCCTCAAGAAATCAGATGGGAC...AAAGTCTCCCACGAGTACACTAAACCTAGGTCTGGTCACCAATAGGGTTTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS TCA 90 bp ACTTCTTCCCATTCCCATTTCCTCCGTATCTGCACTGACTTCTTCTaGACATCTAAGTCGGTTTCCTGCCACATCATGGTGCCCACATCT +
Preference number: 5 (lower is better)
Translates to: TSSHSHFLRICTDFF*TSKSVSCHIMVPTS
Trigger: AGATGTGGGCACCATGATGTGGCAGGAAACCGACTTAGATGTTCAGAAGAAGTCAGTGCAGATACGGAGGAAATGGGAATGGGAAGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530781.5
CDS-3UTR CAA 90 bp TACCCCAATCATATTACGGAAAGTCAGACCCAGGAGACAGGACTCAACAGCCACGACAGCTCTCCTTCCTaGATCCATGACATAGTTCTT +
Preference number: 5 (lower is better)
Translates to: YPNHITESQTQETGLNSHDSSPS*IHDIVL
Trigger: AAGAACTATGTCATGGATCAAGGAAGGAGAGCTGTC...GTGGCTGTTGAGTCCTGTCTCCTGGGTCTGACTTTCCGTAATATGATTGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR CAA 90 bp TTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGAGCCCTGTCACTCTTGGAGCGTTaGAAGTTCTCAATGCTGAAT +
Preference number: 5 (lower is better)
Translates to: LSGKEVPFTKKRKGSGALSLLER*KFSMLN
Trigger: ATTCAGCATTGAGAACTTCAAACGCTCCAAGAGTGA...CAGGGCTCCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
ENST00000525682.6
ENST00000526219.5
CDS-3UTR CAA 90 bp AATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGTAAAGCTGTAAAACGTGGCCTGTACAGCTaGTGCAATCAGCTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: NSCLPNYGCQQPHCKAVKRGLYS*CNQLLE
Trigger: CTCCAGGAGCTGATTGCACAAGCTGTACAGGCCACG...TTTTACAGCTTTACAATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp CTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGGGAGCATGGACAATAGTAGAGCCAAATCTTTaGTGGAAGCTGGGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: LLNRRVWHLCLILGAWTIVEPNL*WKLGGR
Trigger: CCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTAC...TATTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp CATTATAGCCGCATAATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGAGGAGGAGAAAAGCTaGTGTGGGCTGAGTCGACAA +
Preference number: 5 (lower is better)
Translates to: HYSRIIHASLIMAVNSPIEEEKS*CGLSRQ
Trigger: TTGTCGACTCAGCCCACACAAGCTTTTCTCCTCCTC...AATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATTATGCGGCTATAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp TTCCCTGAAATTCTGTGTGTTGAAGGATGTGCTGGTGGAAAAAGAAAGTGCATCAGCATTTGGTTGGTGTaGCTGGCTGGTACTTGCCGG +
Preference number: 5 (lower is better)
Translates to: FPEILCVEGCAGGKRKCISIWLV*LAGTCR
Trigger: CCGGCAAGTACCAGCCAGCAACACCAACCAAATGCT...GATGCACTTTCTTTTTCCACCAGCACATCCTTCAACACACAGAATTTCAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp GGGTTCACTGATTGGCTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGTGCTCTTGCTACAACTaGCAAGATTTCACCTCTCCC +
Preference number: 5 (lower is better)
Translates to: GFTDWLLNRRVWHLCLILCSCYN*QDFTSP
Trigger: GGGAGAGGTGAAATCTTGCAAGTTGTAGCAAGAGCA...CAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAGCCAATCAGTGAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp CTCAGGCCAAAGAGAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCGTTTCCTGTGTGCTCTaGCTACAACTTGCAAGATTT +
Preference number: 5 (lower is better)
Translates to: LRPKRDASPINHLYCTPIVSCVL*LQLARF
Trigger: AAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAAC...GATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTCTCTTTGGCCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp CATTCAGGAAACACTTGTTGTAGTTCTTCGTGGCCTGTACAGCTTGTGCAATCAGTGTGGATGGGGGCTTaGCCAAAGGGTTCACTGATT +
Preference number: 5 (lower is better)
Translates to: HSGNTCCSSSWPVQLVQSVWMGA*PKGSLI
Trigger: AATCAGTGAACCCTTTGGCAAAGCCCCCATCCACAC...TGATTGCACAAGCTGTACAGGCCACGAAGAACTACAACAAGTGTTTCCTGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS-3UTR CAA 90 bp ATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAAGGCTAAAATGGAAAGGGTTGAACCTGGCTaGCACAAATCACACCTGTCC +
Preference number: 5 (lower is better)
Translates to: IQGRAKSFVEAGWKAKMERVEPG*HKSHLS
Trigger: GGACAGGTGTGATTTGTGCAAGCCAGGTTCAACCCT...TTCCATTTTAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp CTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGGGAGCATGGACAATAGTCCCATCTGATTTCTaGAGGCAAGGGTTGAACCTG +
Preference number: 5 (lower is better)
Translates to: LLNRRVWHLCLILGAWTIVPSDF*RQGLNL
Trigger: CAGGTTCAACCCTTGCCTCAAGAAATCAGATGGGAC...TATTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp GAGATGCCAGCCCCATTAATCACCTCTACTGTACCCCAATCATATTACGGAAAGGTCCCATCTGATTTCTaGAGGCAAGGGTTGAACCTG +
Preference number: 5 (lower is better)
Translates to: EMPAPLITSTVPQSYYGKVPSDF*RQGLNL
Trigger: CAGGTTCAACCCTTGCCTCAAGAAATCAGATGGGAC...CTTTCCGTAATATGATTGGGGTACAGTAGAGGTGATTAATGGGGCTGGCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp AATCCCAGGCATTCAAGAATACTTCTCTTCTGCTATTACAATGAATTACATGTGGGCTTCTTCCAGGCCTaGGTCAGGAGGCTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: NPRHSRILLFCYYNELHVGFFQA*VRRLPG
Trigger: CCCAGGGAGCCTCCTGACCAAGGCCTGGAAGAAGCC...CACATGTAATTCATTGTAATAGCAGAAGAGAAGTATTCTTGAATGCCTGGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS GCA 90 bp GGCCATCTCTCTCACAGCATTGCTGATCTCATGACGGGATGTGTATaGAAAACAGACATTCAGGAAACACTTTTCTTCCATCAAGCGGCT +
Preference number: 5 (lower is better)
Translates to: GHLSHSIADLMTGCV*KTDIQETLFFHQAA
Trigger: AGCCGCTTGATGGAAGAAAAGTGTTTCCTGAATGTCTGTTTTGCATACACATCCCGTCATGAGATCAGCAATGCTGTGAGAGAGATGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430232.5
ENST00000526219.5
CDS-3UTR CAA 90 bp TTCCCTGAAATTCTGTGTGTTGAAGGATGTGCTGGTGGAAAAAGAAAGTGCATCAGAGTCTCAGCTAGCTaGTTGAAGCCCTGTGAGTGG +
Preference number: 5 (lower is better)
Translates to: FPEILCVEGCAGGKRKCIRVSAS*LKPCEW
Trigger: CCACTCACAGGGCTTCAACAAGCTAGCTGAGACTCT...GATGCACTTTCTTTTTCCACCAGCACATCCTTCAACACACAGAATTTCAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236342.12
ENST00000360009.6
CDS-3UTR CAA 90 bp CCATTCATTATCAGGAAAGGAGGTGCCTTTCACCAAGAAAAGGAAGGGGAGTGGCTGAAATTCTGTGTGTaGAAGGATGTGCTGGTGGAA +
Preference number: 5 (lower is better)
Translates to: PFIIRKGGAFHQEKEGEWLKFCV*KDVLVE
Trigger: TTCCACCAGCACATCCTTCAACACACAGAATTTCAG...CCACTCCCCTTCCTTTTCTTGGTGAAAGGCACCTCCTTTCCTGATAATGAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp TTATTTACTAGCAGATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAGGAAAGGACACAGCTTaGACCCTCACAAGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: LFTSRSKVEPNLLWKLGGGKDTA*TLTSRG
Trigger: TCCTCTGCTTGTGAGGGTCAAAGCTGTGTCCTTTCC...TCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGATCTGCTAGTAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS CCA 90 bp CAGGTAATTTCTTCTGAACATCTAAGTCGGTTTCCTGCCACATCATaGTGCCCACATCTTGATCATTCCCCGTTTCTTCCTTCTCCATCT +
Preference number: 5 (lower is better)
Translates to: QVISSEHLSRFPATS*CPHLDHSPFLPSPS
Trigger: AGATGGAGAAGGAAGAAACGGGGAATGATCAAGATGTGGGCACCATGATGTGGCAGGAAACCGACTTAGATGTTCAGAAGAAATTACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525546.5
CDS-3UTR CAA 90 bp CTTCTCAATCGCCGTGTCTGGCATTTATGCTTGATTCTGGGAGCATGGACAATAGACAGCTCTCCTTCCTaGATCCATGACATAGTTCTT +
Preference number: 5 (lower is better)
Translates to: LLNRRVWHLCLILGAWTIDSSPS*IHDIVL
Trigger: AAGAACTATGTCATGGATCAAGGAAGGAGAGCTGTC...TATTGTCCATGCTCCCAGAATCAAGCATAAATGCCAGACACGGCGATTGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR CAA 90 bp AAAGTCATTCTTGGAAAAACACTACCAAAGGGCCAGGAGGGTATAATTTGTAAACGTGGCCTGTACAGCTaGTGCAATCAGCTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: KVILGKTLPKGQEGIICKRGLYS*CNQLLE
Trigger: CTCCAGGAGCTGATTGCACAAGCTGTACAGGCCACG...TTTACAAATTATACCCTCCTGGCCCTTTGGTAGTGTTTTTCCAAGAATGACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR CAA 90 bp AATCCCAGGCATTCAAGAATACTTCTCTTCTGCTATTACAATGAATTACATGTGTGGCCACAGAACGGGTaGGAACACCAGGCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: NPRHSRILLFCYYNELHVWPQNG*EHQAGV
Trigger: CACTCCTGCCTGGTGTTCCAACCCGTTCTGTGGCCA...CACATGTAATTCATTGTAATAGCAGAAGAGAAGTATTCTTGAATGCCTGGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS-3UTR CAA 90 bp AGATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAAGGCTAAAATGGCTGAAATTCTGTGTGTaGAAGGATGTGCTGGTGGAA +
Preference number: 5 (lower is better)
Translates to: RSKVEPNLLWKLGGRLKWLKFCV*KDVLVE
Trigger: TTCCACCAGCACATCCTTCAACACACAGAATTTCAG...CCATTTTAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp AATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGTAAAGCTGTAAAAGGAAAGGACACAGCTTaGACCCTCACAAGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: NSCLPNYGCQQPHCKAVKGKDTA*TLTSRG
Trigger: TCCTCTGCTTGTGAGGGTCAAAGCTGTGTCCTTTCC...TTTTACAGCTTTACAATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp ATCCAAGGTAGAGCCAAATCTTTTGTGGAAGCTGGGTGGAAGGCTAAAATGGAATGCTCTTGCTACAACTaGCAAGATTTCACCTCTCCC +
Preference number: 5 (lower is better)
Translates to: IQGRAKSFVEAGWKAKMECSCYN*QDFTSP
Trigger: GGGAGAGGTGAAATCTTGCAAGTTGTAGCAAGAGCA...TTCCATTTTAGCCTTCCACCCAGCTTCCACAAAAGATTTGGCTCTACCTTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp AATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGTAAAGCTGTAAAAAGGGTTGAACCTGGCTaGCACAAATCACACCTGTCC +
Preference number: 5 (lower is better)
Translates to: NSCLPNYGCQQPHCKAVKRVEPG*HKSHLS
Trigger: GGACAGGTGTGATTTGTGCAAGCCAGGTTCAACCCT...TTTTACAGCTTTACAATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp TTCATGAAAAGTCATTCTTGGAAAAACACTACCAAAGGGCCAGGAGGGTATAATAGAGTCTCAGCTAGCTaGTTGAAGCCCTGTGAGTGG +
Preference number: 5 (lower is better)
Translates to: FMKSHSWKNTTKGPGGYNRVSAS*LKPCEW
Trigger: CCACTCACAGGGCTTCAACAAGCTAGCTGAGACTCT...ATTATACCCTCCTGGCCCTTTGGTAGTGTTTTTCCAAGAATGACTTTTCATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR CAA 90 bp AATCCCAGGCATTCAAGAATACTTCTCTTCTGCTATTACAATGAATTACATGTGCGTGGCCTGTACAGCTaGTGCAATCAGCTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: NPRHSRILLFCYYNELHVRGLYS*CNQLLE
Trigger: CTCCAGGAGCTGATTGCACAAGCTGTACAGGCCACG...CACATGTAATTCATTGTAATAGCAGAAGAGAAGTATTCTTGAATGCCTGGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS-3UTR CAA 90 bp AAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTCTCAGTTGGAAGAAGTGTTaGGTTCTGCTCAGTCCTGTT +
Preference number: 5 (lower is better)
Translates to: KVRGFLCALATTCKISPLSWKKC*VLLSPV
Trigger: AACAGGACTGAGCAGAACCAAACACTTCTTCCAACT...GAGAGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp TTCATGAAAAGTCATTCTTGGAAAAACACTACCAAAGGGCCAGGAGGGTATAATCCGTCTACCTCACTCTaGGAGCGTTTGAAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: FMKSHSWKNTTKGPGGYNPSTSL*ERLKFS
Trigger: TGAGAACTTCAAACGCTCCAAGAGTGAGGTAGACGG...ATTATACCCTCCTGGCCCTTTGGTAGTGTTTTTCCAAGAATGACTTTTCATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS-3UTR CAA 90 bp AAAGTTAGGGGTTTCCTGTGTGCTCTTGCTACAACTTGCAAGATTTCACCTCTCGTTTCCTGTGTGCTCTaGCTACAACTTGCAAGATTT +
Preference number: 5 (lower is better)
Translates to: KVRGFLCALATTCKISPLVSCVL*LQLARF
Trigger: AAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAAC...GAGAGGTGAAATCTTGCAAGTTGTAGCAAGAGCACACAGGAAACCCCTAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp CATTATAGCCGCATAATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTTGGAAGGACACTAAATaGGTCCCATCTGATTTCTTG +
Preference number: 5 (lower is better)
Translates to: HYSRIIHASLIMAVNSPIWKDTK*VPSDFL
Trigger: CAAGAAATCAGATGGGACCAATTTAGTGTCCTTCCA...AATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATTATGCGGCTATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp AATCCCAGGCATTCAAGAATACTTCTCTTCTGCTATTACAATGAATTACATGTGGTAGAGCTCTCCGTCTaGCTGGAAGGGCTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: NPRHSRILLFCYYNELHVVELSV*LEGLLP
Trigger: TGGAAGAAGCCCTTCCAGCAAGACGGAGAGCTCTAC...CACATGTAATTCATTGTAATAGCAGAAGAGAAGTATTCTTGAATGCCTGGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS TCA 90 bp AAGAAAGAAAATAAGAAGTCACCAAGGTTTGCGAAGAGCTATAACTaGCTTCTGGGGAATCAGATGGACTATGGAGAGCAGCCAGCATTA +
Preference number: 5 (lower is better)
Translates to: KKENKKSPRFAKSYN*LLGNQMDYGEQPAL
Trigger: TAATGCTGGCTGCTCTCCATAGTCCATCTGATTCCCCAGAAGTCAGTTATAGCTCTTCGCAAACCTTGGTGACTTCTTATTTTCTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525410.1
ENST00000531955.5
CDS CCA 90 bp TCAGATGGACTATGGAGAGCAGCCAGCATTAGAATCCAAAGACACTaGTCTAAGCCTATAATCTTTTACCACCCAGAGTTTTATAACGCA +
Preference number: 5 (lower is better)
Translates to: SDGLWRAASIRIQRH*SKPIIFYHPEFYNA
Trigger: TGCGTTATAAAACTCTGGGTGGTAAAAGATTATAGGCTTAGACCAGTGTCTTTGGATTCTAATGCTGGCTGCTCTCCATAGTCCATCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531955.5
CDS-3UTR CAA 90 bp GAAGAAGGAAAATGGACTTTAAAGAGAGTAGCATTTGGTTGGTGTTGCTGGCTGTCACTCTTGGAGCGTTaGAAGTTCTCAATGCTGAAT +
Preference number: 5 (lower is better)
Translates to: EEGKWTLKRVAFGWCCWLSLLER*KFSMLN
Trigger: ATTCAGCATTGAGAACTTCAAACGCTCCAAGAGTGA...CAGCCAGCAACACCAACCAAATGCTACTCTCTTTAAAGTCCATTTTCCTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000434391.6
CDS-3UTR CAA 90 bp AATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGTAAAGCTGTAAAAAGTTGGAAGAAGTGTTaGGTTCTGCTCAGTCCTGTT +
Preference number: 5 (lower is better)
Translates to: NSCLPNYGCQQPHCKAVKSWKKC*VLLSPV
Trigger: AACAGGACTGAGCAGAACCAAACACTTCTTCCAACT...TTTTACAGCTTTACAATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS-3UTR CAA 90 bp AATCCCAGGCATTCAAGAATACTTCTCTTCTGCTATTACAATGAATTACATGTGATGAGGACTTCGGGCTaGAACAGTTGCCGTAGAGCT +
Preference number: 5 (lower is better)
Translates to: NPRHSRILLFCYYNELHVMRTSG*NSCRRA
Trigger: AGCTCTACGGCAACTGTTCAAGCCCGAAGTCCTCAT...CACATGTAATTCATTGTAATAGCAGAAGAGAAGTATTCTTGAATGCCTGGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS-3UTR CAA 90 bp AATTCATGCCTCCCTAATTATGGCTGTCAACAGCCCCATTGTAAAGCTGTAAAATGGAAGGACACTAAATaGGTCCCATCTGATTTCTTG +
Preference number: 5 (lower is better)
Translates to: NSCLPNYGCQQPHCKAVKWKDTK*VPSDFL
Trigger: CAAGAAATCAGATGGGACCAATTTAGTGTCCTTCCA...TTTTACAGCTTTACAATGGGGCTGTTGACAGCCATAATTAGGGAGGCATGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000431933.5
ENST00000434391.6
CDS TCA 90 bp ACATCATCAACTTTAATAACAGGTTTTTATATAAGATTATCCAACTaGCCAGAAGGCCAACCGGTGCTCTGGGCCATTGCTCACCTTTAT +
Preference number: 5 (lower is better)
Translates to: TSSTLITGFYIRLSN*PEGQPVLWAIAHLY
Trigger: ATAAAGGTGAGCAATGGCCCAGAGCACCGGTTGGCCTTCTGGTCAGTTGGATAATCTTATATAAAAACCTGTTATTAAAGTTGATGATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527611.1
CDS-3UTR CAA 90 bp TTCATGAAAAGTCATTCTTGGAAAAACACTACCAAAGGGCCAGGAGGGTATAATTCACTCTTGGAGCGTTaGAAGTTCTCAATGCTGAAT +
Preference number: 5 (lower is better)
Translates to: FMKSHSWKNTTKGPGGYNSLLER*KFSMLN
Trigger: ATTCAGCATTGAGAACTTCAAACGCTCCAAGAGTGA...ATTATACCCTCCTGGCCCTTTGGTAGTGTTTTTCCAAGAATGACTTTTCATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374185.7
CDS TCA 72 bp GCGTCCCCACGGCTTCAGTGGGCCGGCACTTCCTCATaGCGTGGCGCTGGCAGAACACGTCATCTTTGGGCG +
Preference number: 6 (lower is better)
Translates to: ASPRLQWAGTSS*RGAGRTRHLWA
Trigger: CGCCCAAAGATGACGTGTTCTGCCAGCGCCACGTCATGAGGAAGTGCCGGCCCACTGAAGCCGTGGGGACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434391.6
CDS TCA 72 bp GGGCTCTGCCATACACACCCACCTCAGCTAGCTTGTTaGAGCCCTGTGAGTGGCCTTCCTGCCGCTCCACCT +
Preference number: 6 (lower is better)
Translates to: GLCHTHPPQLAC*SPVSGLPAAPP
Trigger: AGGTGGAGCGGCAGGAAGGCCACTCACAGGGCTTCAACAAGCTAGCTGAGGTGGGTGTGTATGGCAGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487944.5
CDS CAA 72 bp CTCAGTGGTCTCCTGATTATTCCCTCAGTCGTCCCTTaGCTTCTCCCGCAGCTGCTCCCCGCCCAGTCACCC +
Preference number: 6 (lower is better)
Translates to: LSGLLIIPSVVP*LLPQLLPAQSP
Trigger: GGGTGACTGGGCGGGGAGCAGCTGCGGGAGAAGCAAAGGGACGACTGAGGGAATAATCAGGAGACCACTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000436153.6
ENST00000525165.5
ENST00000525326.5
ENST00000525546.5
ENST00000528557.5
ENST00000529688.5
ENST00000530781.5
CDS CAA 72 bp TGGGCTCTGCCATACACACCCACCTCAGCTAGCTTGTaGAAGCCCTGTGAGTGGCCTTCCTGCCGCTCCACC +
Preference number: 6 (lower is better)
Translates to: WALPYTPTSASL*KPCEWPSCRST
Trigger: GGTGGAGCGGCAGGAAGGCCACTCACAGGGCTTCAACAAGCTAGCTGAGGTGGGTGTGTATGGCAGAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487944.5
CDS CAA 72 bp AGTCTGAGAGGGGAGAAGGCAAGGAGCTCAGCTAGCTaGTTGAAGCCCTGTGAGTGGCCTTCCTGCCGCTCC +
Preference number: 6 (lower is better)
Translates to: SLRGEKARSSAS*LKPCEWPSCRS
Trigger: GGAGCGGCAGGAAGGCCACTCACAGGGCTTCAACAAGCTAGCTGAGCTCCTTGCCTTCTCCCCTCTCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374186.7
ENST00000434391.6
ENST00000525410.1
ENST00000526278.5
ENST00000529688.5
CDS CAA 90 bp ACTTCACGCCTCAGTGGTCTCCTGATTATTCCCTCAGTCGTCCCTTaGCTTCTCCCGCAGCTGCTCCCCGCCCAGTCACCCTCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: TSRLSGLLIIPSVVP*LLPQLLPAQSPSSP
Trigger: AGGAGAAGAGGGTGACTGGGCGGGGAGCAGCTGCGGGAGAAGCAAAGGGACGACTGAGGGAATAATCAGGAGACCACTGAGGCGTGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000436153.6
ENST00000525165.5
ENST00000525326.5
ENST00000525546.5
ENST00000529688.5
ENST00000530781.5
CDS CAA 90 bp ATTTCACGCCTCAGTGGTCTCCTGATTATTCCCTCAGTCGTCCCTTaGCTTCTCCCGCAGCTGCTCCCCGCCCAGTCACCCTCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: ISRLSGLLIIPSVVP*LLPQLLPAQSPSSP
Trigger: AGGAGAAGAGGGTGACTGGGCGGGGAGCAGCTGCGGGAGAAGCAAAGGGACGACTGAGGGAATAATCAGGAGACCACTGAGGCGTGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528557.5
CDS TCA 72 bp GGTTCAAACACCACCGCAGAGTCTCAGCTAGCTTGTTaGAGCCCTGTGAGTGGCCTTCCTGCCGCTCCACCT +
Preference number: 6 (lower is better)
Translates to: GSNTTAESQLAC*SPVSGLPAAPP
Trigger: AGGTGGAGCGGCAGGAAGGCCACTCACAGGGCTTCAACAAGCTAGCTGAGACTCTGCGGTGGTGTTTGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000374185.7
ENST00000427245.6
ENST00000430232.5
ENST00000436153.6
ENST00000525165.5
ENST00000525326.5
ENST00000525546.5
ENST00000525682.6
ENST00000526219.5
ENST00000528557.5
ENST00000531312.5
ENST00000531955.5
ENST00000533087.5
CDS CCA 72 bp GGGCACAATCTCTATTCACTGCAGCCTCAAGCTTCCTaGGCTCAGATAGTCCTCCCACCTCAGCCTCCTGAG +
Preference number: 6 (lower is better)
Translates to: GHNLYSLQPQAS*AQIVLPPQPPE
Trigger: CTCAGGAGGCTGAGGTGGGAGGACTATCTGAGCCCAGGAAGCTTGAGGCTGCAGTGAATAGAGATTGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487944.5
CDS CAA 72 bp CCAACTGACCAGAAGGCCAACCGGTGCTCTGGGCCATaGCTCACCTTTATGATGTTGGCACAGAACCGCTCC +
Preference number: 6 (lower is better)
Translates to: PTDQKANRCSGP*LTFMMLAQNRS
Trigger: GGAGCGGTTCTGTGCCAACATCATAAAGGTGAGCAATGGCCCAGAGCACCGGTTGGCCTTCTGGTCAGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527611.1
CDS TCA 72 bp ATCGCACGCCTAGTACTTCACGCCTCAGTGGTCTCCTaGTTATTCCCTCAGTCGTCCCTTTGCTTCTCCCGC +
Preference number: 6 (lower is better)
Translates to: IARLVLHASVVS*LFPQSSLCFSR
Trigger: GCGGGAGAAGCAAAGGGACGACTGAGGGAATAATCAGGAGACCACTGAGGCGTGAAGTACTAGGCGTGCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000436153.6
ENST00000525165.5
ENST00000525326.5
ENST00000525546.5
ENST00000529688.5
ENST00000530781.5
CDS TCA 72 bp AGGCCAACCGGTGCTCTGGGCCATTGCTCACCTTTATaGTGTTGGCACAGAACCGCTCCCAAAGTGACAGCT +
Preference number: 6 (lower is better)
Translates to: RPTGALGHCSPL*CWHRTAPKVTA
Trigger: AGCTGTCACTTTGGGAGCGGTTCTGTGCCAACATCATAAAGGTGAGCAATGGCCCAGAGCACCGGTTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527611.1
CDS CAA 90 bp CAGAAGGCCAACCGGTGCTCTGGGCCATTGCTCACCTTTATGATGTaGGCACAGAACCGCTCCCAAAGTGACAGCTCTCCTTCCTTGATC +
Preference number: 6 (lower is better)
Translates to: QKANRCSGPLLTFMM*AQNRSQSDSSPSLI
Trigger: GATCAAGGAAGGAGAGCTGTCACTTTGGGAGCGGTTCTGTGCCAACATCATAAAGGTGAGCAATGGCCCAGAGCACCGGTTGGCCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527611.1
CDS GCA 72 bp ACATGTGGAGCTATGAGGACTTCGGGCTTGAACAGTTaGCGTAGAGCTCTCCGTCTTGCTGGAAGGGCTTCT +
Preference number: 6 (lower is better)
Translates to: TCGAMRTSGLNS*RRALRLAGRAS
Trigger: AGAAGCCCTTCCAGCAAGACGGAGAGCTCTACGGCAACTGTTCAAGCCCGAAGTCCTCATAGCTCCACATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416052.1
CDS CAA 72 bp AACCGGTGCTCTGGGCCATTGCTCACCTTTATGATGTaGGCACAGAACCGCTCCCAAAGTGACAGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: NRCSGPLLTFMM*AQNRSQSDSSP
Trigger: AGGAGAGCTGTCACTTTGGGAGCGGTTCTGTGCCAACATCATAAAGGTGAGCAATGGCCCAGAGCACCGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527611.1
CDS GCA 72 bp GCATCTTACTTTTCTTCCATCAAGCGGCTGAACTTCTaGCGGGCCAGATCCATAAGCCCGTCTACCTCACTC +
Preference number: 6 (lower is better)
Translates to: ASYFSSIKRLNF*RARSISPSTSL
Trigger: GAGTGAGGTAGACGGGCTTATGGATCTGGCCCGGCAGAAGTTCAGCCGCTTGATGGAAGAAAAGTAAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374186.7
ENST00000528557.5
ENST00000531955.5
CDS GCA 72 bp AGGAAACACTTTTCTTCCATCAAGCGGCTGAACTTCTaGCGGGCCAGATCCATAAGCCCGTCTACCTCACTC +
Preference number: 6 (lower is better)
Translates to: RKHFSSIKRLNF*RARSISPSTSL
Trigger: GAGTGAGGTAGACGGGCTTATGGATCTGGCCCGGCAGAAGTTCAGCCGCTTGATGGAAGAAAAGTGTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430232.5
ENST00000526219.5
CDS CAA 90 bp CAGGTAATCTCTGGAGGCAAAAGCCTTTCCTCGGTTCTCCTGGCTTaGCAGACTTCTTCCCATTCCCATTTCCTCCGTATCTGCACTGAC +
Preference number: 6 (lower is better)
Translates to: QVISGGKSLSSVLLA*QTSSHSHFLRICTD
Trigger: GTCAGTGCAGATACGGAGGAAATGGGAATGGGAAGAAGTCTGCAAAGCCAGGAGAACCGAGGAAAGGCTTTTGCCTCCAGAGATTACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530781.5
CDS TCA 72 bp GGCACTTCTTGGCATAGCGACGGTTCCCGTCCATTATaGATGCAATGTGTTTCGGCATTGGGCCTGCCTTTA +
Preference number: 6 (lower is better)
Translates to: GTSWHSDGSRPL*MQCVSALGLPL
Trigger: TAAAGGCAGGCCCAATGCCGAAACACATTGCATTCATAATGGACGGGAACCGTCGCTATGCCAAGAAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000374185.7
ENST00000374186.7
ENST00000427245.6
ENST00000430232.5
ENST00000434391.6
ENST00000436153.6
ENST00000487944.5
ENST00000525165.5
ENST00000525326.5
ENST00000525410.1
ENST00000525546.5
ENST00000525682.6
ENST00000526219.5
ENST00000526278.5
ENST00000528557.5
ENST00000529688.5
ENST00000530781.5
ENST00000531312.5
ENST00000531955.5
ENST00000533087.5
CDS CCA 72 bp GCTGAAGCACGCTATGGTTCATCTGGAACTGCAGGATaGCCTCGAAGAGGTTCCAAAATGTATACTCTGGCC +
Preference number: 6 (lower is better)
Translates to: AEARYGSSGTAG*PRRGSKMYTLA
Trigger: GGCCAGAGTATACATTTTGGAACCTCTTCGAGGCCATCCTGCAGTTCCAGATGAACCATAGCGTGCTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360009.6
ENST00000416052.1
CDS CCA 72 bp ACAAGCAAACACCAGCCAGGTAATTTCACGCCTCAGTaGTCTCCTGATTATTCCCTCAGTCGTCCCTTTGCT +
Preference number: 6 (lower is better)
Translates to: TSKHQPGNFTPQ*SPDYSLSRPFA
Trigger: AGCAAAGGGACGACTGAGGGAATAATCAGGAGACCACTGAGGCGTGAAATTACCTGGCTGGTGTTTGCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528557.5
CDS GCA 72 bp CTTCTTGGCATAGCGACGGTTCCCGTCCATTATGAATaGAATGTGTTTCGGCATTGGGCCTGCCTTTATGAT +
Preference number: 6 (lower is better)
Translates to: LLGIATVPVHYE*NVFRHWACLYD
Trigger: ATCATAAAGGCAGGCCCAATGCCGAAACACATTGCATTCATAATGGACGGGAACCGTCGCTATGCCAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000374185.7
ENST00000374186.7
ENST00000427245.6
ENST00000430232.5
ENST00000434391.6
ENST00000436153.6
ENST00000487944.5
ENST00000525165.5
ENST00000525326.5
ENST00000525410.1
ENST00000525546.5
ENST00000525682.6
ENST00000526219.5
ENST00000526278.5
ENST00000528557.5
ENST00000529688.5
ENST00000530781.5
ENST00000531312.5
ENST00000531955.5
ENST00000533087.5
CDS CCA 72 bp AGTCACCAAGGTTTGCGAAGAGCTATAACTGACTTCTaGGGAATCAGATGGACTATGGAGAGCAGCCAGCAT +
Preference number: 6 (lower is better)
Translates to: SHQGLRRAITDF*GIRWTMESSQH
Trigger: ATGCTGGCTGCTCTCCATAGTCCATCTGATTCCCCAGAAGTCAGTTATAGCTCTTCGCAAACCTTGGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525410.1
ENST00000531955.5
CDS CAA 90 bp ATGATGTTGGCACAGAACCGCTCCCAAAGTGACAGCTCTCCTTCCTaGATCCATGACATAGTTCTTTTCCAGTCAGAAGATCACTCCAGA +
Preference number: 6 (lower is better)
Translates to: MMLAQNRSQSDSSPS*IHDIVLFQSEDHSR
Trigger: TCTGGAGTGATCTTCTGACTGGAAAAGAACTATGTCATGGATCAAGGAAGGAGAGCTGTCACTTTGGGAGCGGTTCTGTGCCAACATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000374185.7
ENST00000374186.7
ENST00000427245.6
ENST00000430232.5
ENST00000434391.6
ENST00000436153.6
ENST00000487944.5
ENST00000525165.5
ENST00000525326.5
ENST00000525410.1
ENST00000525546.5
ENST00000525682.6
ENST00000526219.5
ENST00000526278.5
ENST00000527611.1
ENST00000528557.5
ENST00000529688.5
ENST00000530781.5
ENST00000531312.5
ENST00000531955.5
ENST00000533087.5
CDS GCA 72 bp TCTGAACATCTAAGTCGGTTTCCTGCCACATCATGGTaGCCACATCTTGATCATTCCCCGTTTCTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: SEHLSRFPATSW*PHLDHSPFLPS
Trigger: AGAAGGAAGAAACGGGGAATGATCAAGATGTGGGCACCATGATGTGGCAGGAAACCGACTTAGATGTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525546.5
ENST00000530781.5
CDS CCA 72 bp GCAGAGACTCAGAGATATCATTGTTGTAGTTCTTCGTaGCCTGTACAGCTTGTGCAATCAGCTCCTGGAGAT +
Preference number: 6 (lower is better)
Translates to: AETQRYHCCSSS*PVQLVQSAPGD
Trigger: ATCTCCAGGAGCTGATTGCACAAGCTGTACAGGCCACGAAGAACTACAACAATGATATCTCTGAGTCTCTGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431933.5
ENST00000525682.6
CDS CCA 72 bp TCTTCTGAACATCTAAGTCGGTTTCCTGCCACATCATaGTGCCCACATCTTGATCATTCCCCGTTTCTTCCT +
Preference number: 6 (lower is better)
Translates to: SSEHLSRFPATS*CPHLDHSPFLP
Trigger: AGGAAGAAACGGGGAATGATCAAGATGTGGGCACCATGATGTGGCAGGAAACCGACTTAGATGTTCAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525546.5
ENST00000530781.5
CDS CAA 72 bp GCACAGAACCGCTCCCAAAGTGACAGCTCTCCTTCCTaGATCCATGACATAGTTCTTTTCCAGTCAGAAGAT +
Preference number: 6 (lower is better)
Translates to: AQNRSQSDSSPS*IHDIVLFQSED
Trigger: ATCTTCTGACTGGAAAAGAACTATGTCATGGATCAAGGAAGGAGAGCTGTCACTTTGGGAGCGGTTCTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENST00000236342.12
ENST00000360009.6
ENST00000374185.7
ENST00000374186.7
ENST00000427245.6
ENST00000430232.5
ENST00000434391.6
ENST00000436153.6
ENST00000487944.5
ENST00000525165.5
ENST00000525326.5
ENST00000525410.1
ENST00000525546.5
ENST00000525682.6
ENST00000526219.5
ENST00000526278.5
ENST00000527611.1
ENST00000528557.5
ENST00000529688.5
ENST00000530781.5
ENST00000531312.5
ENST00000531955.5
ENST00000533087.5
CDS CAA 72 bp GATATCATTGTTGTAGTTCTTCGTGGCCTGTACAGCTaGTGCAATCAGCTCCTGGAGATCCAAGGGCAACAA +
Preference number: 6 (lower is better)
Translates to: DIIVVVLRGLYS*CNQLLEIQGQQ
Trigger: TTGTTGCCCTTGGATCTCCAGGAGCTGATTGCACAAGCTGTACAGGCCACGAAGAACTACAACAATGATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431933.5
ENST00000525682.6
CDS TCA 72 bp AATAAGAAGTCACCAAGGTTTGCGAAGAGCTATAACTaGCTTCTGGGGAATCAGATGGACTATGGAGAGCAG +
Preference number: 6 (lower is better)
Translates to: NKKSPRFAKSYN*LLGNQMDYGEQ
Trigger: CTGCTCTCCATAGTCCATCTGATTCCCCAGAAGTCAGTTATAGCTCTTCGCAAACCTTGGTGACTTCTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525410.1
ENST00000531955.5