RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DHCR24 (Homo sapiens)

Ensembl gene IDs: ENSG00000116133

Ensembl transcript IDs: ENST00000371269.9, ENST00000436604.2, ENST00000535035.6, ENST00000647585.1, ENST00000647912.1, ENST00000648182.1, ENST00000648494.1, ENST00000648641.1, ENST00000648712.1, ENST00000648728.1, ENST00000649769.1, ENST00000650362.1

Found 1382 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGCACCAAGGATGGCAGGGAGAACTTTGGCCTCGGACCTGGCTTTaGCACAGCGCATCTGGGGCCTCCCCACTCCGTGGCTGCCCTCCT +
Preference number: 1 (lower is better)
Translates to: RHQGWQGELWPRTWL*HSASGASPLRGCPP
Trigger: AGGAGGGCAGCCACGGAGTGGGGAGGCCCCAGATGCGCTGTGCCAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCATCCTTGGTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 90 bp GCAGGACGGCACCAAGGATGGCAGGGAGAACTTTGGCCTCGGACCTaGCTTTGGCACAGCGCATCTGGGGCCTCCCCACTCCGTGGCTGC +
Preference number: 1 (lower is better)
Translates to: AGRHQGWQGELWPRT*LWHSASGASPLRGC
Trigger: GCAGCCACGGAGTGGGGAGGCCCCAGATGCGCTGTGCCAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCATCCTTGGTGCCGTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 90 bp CCTTCTCCAGGAACACAGGGCACTCCGAGTGGACTCAGTGGTGGCTaGGGTGGGCCTGCAGGCCCAGGCATGAAGGAGGAAGGGGCAGGA +
Preference number: 1 (lower is better)
Translates to: PSPGTQGTPSGLSGG*GGPAGPGMKEEGAG
Trigger: TCCTGCCCCTTCCTCCTTCATGCCTGGGCCTGCAGGCCCACCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGTGTTCCTGGAGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 90 bp GTGTGCAGGGCCTGCTGCAGGCACTTCATGGGCACCAGCATGTCCTaGACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGGTCTCACCC +
Preference number: 1 (lower is better)
Translates to: VCRACCRHFMGTSMS*TTWCCSYSLRRVSP
Trigger: GGGTGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAGGCCCTGCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 90 bp GCAGGCCCAGGCATGAAGGAGGAAGGGGCAGGACGGCACCAAGGATaGCAGGGAGAACTTTGGCCTCGGACCTGGCTTTGGCACAGCGCA +
Preference number: 1 (lower is better)
Translates to: AGPGMKEEGAGRHQG*QGELWPRTWLWHSA
Trigger: TGCGCTGTGCCAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCATCCTTGGTGCCGTCCTGCCCCTTCCTCCTTCATGCCTGGGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 90 bp AATGCCTTCTCCAGGAACACAGGGCACTCCGAGTGGACTCAGTGGTaGCTGGGGTGGGCCTGCAGGCCCAGGCATGAAGGAGGAAGGGGC +
Preference number: 1 (lower is better)
Translates to: NAFSRNTGHSEWTQW*LGWACRPRHEGGRG
Trigger: GCCCCTTCCTCCTTCATGCCTGGGCCTGCAGGCCCACCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGTGTTCCTGGAGAAGGCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 90 bp GCCTGCTGCAGGCACTTCATGGGCACCAGCATGTCCTGCACCACGTaGTGCTGCTCGTACAGCTTGCGCAGGGTCTCACCCTGGGTCAGC +
Preference number: 1 (lower is better)
Translates to: ACCRHFMGTSMSCTT*CCSYSLRRVSPWVS
Trigger: GCTGACCCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 90 bp TGGAATGCCTTCTCCAGGAACACAGGGCACTCCGAGTGGACTCAGTaGTGGCTGGGGTGGGCCTGCAGGCCCAGGCATGAAGGAGGAAGG +
Preference number: 1 (lower is better)
Translates to: WNAFSRNTGHSEWTQ*WLGWACRPRHEGGR
Trigger: CCTTCCTCCTTCATGCCTGGGCCTGCAGGCCCACCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGTGTTCCTGGAGAAGGCATTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 90 bp CACTCACACGTGTCTGTCTCTCCAGGCGGGCTCCAGCTCAGTGCCTaGCGGCCTTGCAGATCTTGTCGTACACCTCGGGGAAGGCGTCCT +
Preference number: 1 (lower is better)
Translates to: HSHVSVSPGGLQLSA*RPCRSCRTPRGRRP
Trigger: AGGACGCCTTCCCCGAGGTGTACGACAAGATCTGCAAGGCCGCCAGGCACTGAGCTGGAGCCCGCCTGGAGAGACAGACACGTGTGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR TCA 90 bp TGCCCTCCTGAGATCCCAGGGTGGGGAAGAGCTGTCCTTCTCCTGTaGGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCA +
Preference number: 1 (lower is better)
Translates to: CPPEIPGWGRAVLLL*GPRLADGGDGRATP
Trigger: TGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGCTCTTCCCCACCCTGGGATCTCAGGAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 90 bp TGCAGGCACTTCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTaGTCGTACAGCTTGCGCAGGGTCTCACCCTGGGTCAGCTTCAGG +
Preference number: 1 (lower is better)
Translates to: CRHFMGTSMSCTTWC*SYSLRRVSPWVSFR
Trigger: CCTGAAGCTGACCCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 90 bp TGCTGCAGGCACTTCATGGGCACCAGCATGTCCTGCACCACGTGGTaGTGCTCGTACAGCTTGCGCAGGGTCTCACCCTGGGTCAGCTTC +
Preference number: 1 (lower is better)
Translates to: CCRHFMGTSMSCTTW*CSYSLRRVSPWVSF
Trigger: GAAGCTGACCCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 90 bp TCCCAGGGTGGGGAAGAGCTGTCCTTCTCCTGTGAGGACCTCGTCTaGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTC +
Preference number: 1 (lower is better)
Translates to: SQGGEELSFSCEDLV*LMEAMAGQLQRIPF
Trigger: GAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGCTCTTCCCCACCCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 90 bp TGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGGTCTCACCCTaGGTCAGCTTCAGGAGGGAGATCTTGGGAGGCACCATCCAGCCA +
Preference number: 1 (lower is better)
Translates to: CTTWCCSYSLRRVSP*VSFRREILGGTIQP
Trigger: TGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGAAGCTGACCCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 90 bp GGTAGAGTCAGGAGTAGAGCTCAGACTGCTGGGCTTCTGCCCCTCTaGTTGGCCAGAGGCACAGCTGCCTTCCCTAATGGAGCAGTGGGG +
Preference number: 1 (lower is better)
Translates to: GRVRSRAQTAGLLPL*LARGTAAFPNGAVG
Trigger: CCCCACTGCTCCATTAGGGAAGGCAGCTGTGCCTCTGGCCAAGCAGAGGGGCAGAAGCCCAGCAGTCTGAGCTCTACTCCTGACTCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR CCA 90 bp GGAGAGTCCAGCCAATGGAGGTCAGCAGGGCAGTCACCTGGCCCATaGTCACCAAGGGCTCCACACGGACAATTCAGGAGGCTGAGGCAA +
Preference number: 1 (lower is better)
Translates to: GESSQWRSAGQSPGP*SPRAPHGQFRRLRQ
Trigger: TTGCCTCAGCCTCCTGAATTGTCCGTGTGGAGCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCTGACCTCCATTGGCTGGACTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647912.1
3UTR CCA 90 bp AACACGGGGAGAGTCCAGCCAATGGAGGTCAGCAGGGCAGTCACCTaGCCCATGGTCACCAAGGGCTCCACACGGACAATTCAGGAGGCT +
Preference number: 1 (lower is better)
Translates to: NTGRVQPMEVSRAVT*PMVTKGSTRTIQEA
Trigger: AGCCTCCTGAATTGTCCGTGTGGAGCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCTGACCTCCATTGGCTGGACTCTCCCCGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647912.1
3UTR TCA 90 bp AGGGTGGGGAAGAGCTGTCCTTCTCCTGTGAGGACCTCGTCTGGCTaGTGGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCA +
Preference number: 1 (lower is better)
Translates to: RVGKSCPSPVRTSSG*WRRWQGNSSVSPSS
Trigger: TGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGCTCTTCCCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 90 bp CCCTCCAGAGGCCAAATGGGTAGGGTGGTTCCTTTGCCTTCTGAGTaGCTGGATGCCCCCAGCCCTCACAAGACCCTGCTAAGACACTGG +
Preference number: 1 (lower is better)
Translates to: PSRGQMGRVVPLPSE*LDAPSPHKTLLRHW
Trigger: CCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACCCATTTGGCCTCTGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 90 bp TTTCTTCTGCCCCCTCCAGAGGCCAAATGGGTAGGGTGGTTCCTTTaGCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCCTGC +
Preference number: 1 (lower is better)
Translates to: FLLPPPEAKWVGWFL*LLSAWMPPALTRPC
Trigger: GCAGGGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACCCATTTGGCCTCTGGAGGGGGCAGAAGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 90 bp CTCTGGGCCACTCACCCATGCACGCTGCGGACAAACTTCTCCAGCTaGCTCATGCAGGACCTGGCTTCAAAGTGTTTCACACGCGGCTCC +
Preference number: 1 (lower is better)
Translates to: LWATHPCTLRTNFSS*LMQDLASKCFTRGS
Trigger: GGAGCCGCGTGTGAAACACTTTGAAGCCAGGTCCTGCATGAGGCAGCTGGAGAAGTTTGTCCGCAGCGTGCATGGGTGAGTGGCCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR CCA 90 bp GCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTaGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCAAGAA +
Preference number: 1 (lower is better)
Translates to: APAAEQRGPTPTKTK*VLGKMRPAGLVSQE
Trigger: TTCTTGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 90 bp GAGTGCCTGGATGCCCCCAGCCCTCACAAGACCCTGCTAAGACACTaGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACACCCTTCAA +
Preference number: 1 (lower is better)
Translates to: ECLDAPSPHKTLLRH*QCAKPWVGWVNTLQ
Trigger: TTGAAGGGTGTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGGGCATCCAGGCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 90 bp GGACTCGTGGGTGAACTTGGCACAGATAGCCTCCAGGCCCCGCACTaGCTCGAAACGCAGCTTGACGTACTTCTTGGCAGGGATGATGCG +
Preference number: 1 (lower is better)
Translates to: GLVGELGTDSLQAPH*LETQLDVLLGRDDA
Trigger: CGCATCATCCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGCCAGTGCGGGGCCTGGAGGCTATCTGTGCCAAGTTCACCCACGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 90 bp CTGGCGGCCTTGCAGATCTTGTCGTACACCTCGGGGAAGGCGTCCTaGCAACCCAGCTTCTCTCGCAGCTTGTGGTACAAGGAGCCATCA +
Preference number: 1 (lower is better)
Translates to: LAALQILSYTSGKAS*QPSFSRSLWYKEPS
Trigger: TGATGGCTCCTTGTACCACAAGCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGAGGTGTACGACAAGATCTGCAAGGCCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 90 bp GGATGCCCCCAGCCCTCACAAGACCCTGCTAAGACACTGGCAGTGTaGCAAGCCTTGGGTGGGATGGGTGAACACCCTTCAATGACTCTG +
Preference number: 1 (lower is better)
Translates to: GCPQPSQDPAKTLAV*QALGGMGEHPSMTL
Trigger: CAGAGTCATTGAAGGGTGTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGGGCATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 90 bp ACCTCGGGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCTTGTaGTACAAGGAGCCATCAAACATCTCCCAGAACTCCTCCCGGTTC +
Preference number: 1 (lower is better)
Translates to: TSGKASWQPSFSRSL*YKEPSNISQNSSRF
Trigger: GAACCGGGAGGAGTTCTGGGAGATGTTTGATGGCTCCTTGTACCACAAGCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR TCA 90 bp CCAATTCAGAGCGGAGACCACTCTCTCCACCTAGGTGTCCCAGGCTaGGGCTGGGACAAGATTCAACCCTGGAATGCCTTCTCCAGGAAC +
Preference number: 1 (lower is better)
Translates to: PIQSGDHSLHLGVPG*GWDKIQPWNAFSRN
Trigger: GTTCCTGGAGAAGGCATTCCAGGGTTGAATCTTGTCCCAGCCTCAGCCTGGGACACCTAGGTGGAGAGAGTGGTCTCCGCTCTGAATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR TCA 90 bp AGAGAAGTGGGTGAGGACGCCAGGAGGCACACGGAACGCGAGGCGTaGGAGAAACCCAACTGCTCATTCTGCAGCCCAGAAAAGGCTTTT +
Preference number: 1 (lower is better)
Translates to: REVGEDARRHTEREA*EKPNCSFCSPEKAF
Trigger: AAAAGCCTTTTCTGGGCTGCAGAATGAGCAGTTGGGTTTCTCTCACGCCTCGCGTTCCGTGTGCCTCCTGGCGTCCTCACCCACTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR GCA 90 bp TACAGCATCTGGAAGCCATGCACGCTGCGGACAAACTTCTCCAGCTaGCTCATGCAGGACCTGGCTTCAAAGTGTTTCACACGCGGCTCC +
Preference number: 1 (lower is better)
Translates to: YSIWKPCTLRTNFSS*LMQDLASKCFTRGS
Trigger: GGAGCCGCGTGTGAAACACTTTGAAGCCAGGTCCTGCATGAGGCAGCTGGAGAAGTTTGTCCGCAGCGTGCATGGCTTCCAGATGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000648728.1
3UTR GCA 90 bp AGGAATCCCTCTCTCCTTAGCTTTGGCCTTTCCATCTGGAGCAGTTaGCCCTGGACCCAGCTAAGCCCACACCCATCATCTGTTCCGTGG +
Preference number: 1 (lower is better)
Translates to: RNPSLLSFGLSIWSS*PWTQLSPHPSSVPW
Trigger: CCACGGAACAGATGATGGGTGTGGGCTTAGCTGGGTCCAGGGGCAACTGCTCCAGATGGAAAGGCCAAAGCTAAGGAGAGAGGGATTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR CCA 90 bp CGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATaGCTGTGCACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCAC +
Preference number: 1 (lower is better)
Translates to: RWQGNSSVSPSSFQP*LCTGDLMWSLFRLH
Trigger: GTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 90 bp CAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTaGACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGA +
Preference number: 1 (lower is better)
Translates to: QGNSSVSPSSFQPWL*TGDLMWSLFRLHCR
Trigger: TCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 90 bp ACCCACTCCCACCAAGACAAAGTGGGTTTTGGGAAAGATGAGGCCTaGAGGGTTGGTGAGCCAAGAAGAATGAGCCCAGGTCCCCTGGAT +
Preference number: 1 (lower is better)
Translates to: THSHQDKVGFGKDEA*RVGEPRRMSPGPLD
Trigger: ATCCAGGGGACCTGGGCTCATTCTTCTTGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTTGGTGGGAGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 90 bp GTTTATTTCTTTCTTCTGCCCCCTCCAGAGGCCAAATGGGTAGGGTaGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACA +
Preference number: 1 (lower is better)
Translates to: VYFFLLPPPEAKWVG*FLCLLSAWMPPALT
Trigger: TGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACCCATTTGGCCTCTGGAGGGGGCAGAAGAAAGAAATAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 90 bp TGCATCGCACAAAGCTGCCATCAGCCAGGACCAGCTCGTAAGCAGTaGAGATGTGTTGGAACAGGCCGTACTTGTGGGATGATGACTCGA +
Preference number: 1 (lower is better)
Translates to: CIAQSCHQPGPARKQ*RCVGTGRTCGMMTR
Trigger: TCGAGTCATCATCCCACAAGTACGGCCTGTTCCAACACATCTGCACTGCTTACGAGCTGGTCCTGGCTGATGGCAGCTTTGTGCGATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 90 bp TGGCTGTGCACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTaGAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTAC +
Preference number: 1 (lower is better)
Translates to: WLCTGDLMWSLFRLH*RCDAEREATRATTY
Trigger: GTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGTGCACAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 90 bp CATGCAGGACCTGGCTTCAAAGTGTTTCACACGCGGCTCCCCATATaGTCCAATGTCGATGTAGAGCTCTGCCTCATTTCCTTTGGGGTG +
Preference number: 1 (lower is better)
Translates to: HAGPGFKVFHTRLPI*SNVDVELCLISFGV
Trigger: CACCCCAAAGGAAATGAGGCAGAGCTCTACATCGACATTGGAGCATATGGGGAGCCGCGTGTGAAACACTTTGAAGCCAGGTCCTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 90 bp TTCATAGACAGGAATCCCTCTCTCCTTAGCTTTGGCCTTTCCATCTaGAGCAGTTGCCCCTGGACCCAGCTAAGCCCACACCCATCATCT +
Preference number: 1 (lower is better)
Translates to: FIDRNPSLLSFGLSI*SSCPWTQLSPHPSS
Trigger: AGATGATGGGTGTGGGCTTAGCTGGGTCCAGGGGCAACTGCTCCAGATGGAAAGGCCAAAGCTAAGGAGAGAGGGATTCCTGTCTATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR TCA 90 bp CATGTCTTCCAGACAGTAGACACAGTGCCTGTGGCTGTAAGAGCCTaGCAGGGAAGATTCATGCCTTTCTCCTTGGCCCCCATGACCAAA +
Preference number: 1 (lower is better)
Translates to: HVFQTVDTVPVAVRA*QGRFMPFSLAPMTK
Trigger: TTTGGTCATGGGGGCCAAGGAGAAAGGCATGAATCTTCCCTGTCAGGCTCTTACAGCCACAGGCACTGTGTCTACTGTCTGGAAGACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR TCA 90 bp ACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATaGCGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGC +
Preference number: 1 (lower is better)
Translates to: TTMTGSAPLIPASLT*RNSFSDSGFQLRLG
Trigger: GCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 90 bp TCTGAGAGGATTCTGGCACCTGGAATGACAAGACAGATGCTTCCCTaGAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTGAC +
Preference number: 1 (lower is better)
Translates to: SERILAPGMTRQMLP*KPGMSLSGNEMGAD
Trigger: GTCAGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTGTCTTGTCATTCCAGGTGCCAGAATCCTCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 90 bp GGGCTCTGGAGGGGAGAGCCTTACTCTGATACTTTCCACATGCACTaGCCACTGGCATCAAGTTTAACTCCATCCAAAACCATCACATGG +
Preference number: 1 (lower is better)
Translates to: GLWRGEPYSDTFHMH*PLASSLTPSKTITW
Trigger: CCATGTGATGGTTTTGGATGGAGTTAAACTTGATGCCAGTGGGCAGTGCATGTGGAAAGTATCAGAGTAAGGCTCTCCCCTCCAGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR TCA 90 bp TGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGTaGGAATCCTACAGAAACATGAGGGTGGACTCCACTTTCCCACCT +
Preference number: 1 (lower is better)
Translates to: WLEKSSRCSFLPAPR*ESYRNMRVDSTFPP
Trigger: AGGTGGGAAAGTGGAGTCCACCCTCATGTTTCTGTAGGATTCTCACCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 90 bp CGTTATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCCTCTaGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCA +
Preference number: 1 (lower is better)
Translates to: RYNKPGKDLGRFPSL*NGNGTFSELRICKA
Trigger: TGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 90 bp CTGATTCTAAAGAAAACCTTCATGCAGCCAAGAAACTCAGGGCTCTaGAGGGGAGAGCCTTACTCTGATACTTTCCACATGCACTGCCCA +
Preference number: 1 (lower is better)
Translates to: LILKKTFMQPRNSGL*RGEPYSDTFHMHCP
Trigger: TGGGCAGTGCATGTGGAAAGTATCAGAGTAAGGCTCTCCCCTCCAGAGCCCTGAGTTTCTTGGCTGCATGAAGGTTTTCTTTAGAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR TCA 90 bp CTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTaGGGCTGGGCAGTTCTTAAGATAGAGTTGCATAAACAACCAAGC +
Preference number: 1 (lower is better)
Translates to: LPLHDAIPSQIRVFS*GWAVLKIELHKQPS
Trigger: GCTTGGTTGTTTATGCAACTCTATCTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR TCA 90 bp CCCAAGTGTCCACTGGATCATTTTTCCTCTGACTTTCCACACAAATaGGGCTTTCCGTGGGTTTTGCAACCACAGTGTCTAAGACAATCA +
Preference number: 1 (lower is better)
Translates to: PKCPLDHFSSDFPHK*GFPWVLQPQCLRQS
Trigger: TGATTGTCTTAGACACTGTGGTTGCAAAACCCACGGAAAGCCTCATTTGTGTGGAAAGTCAGAGGAAAAATGATCCAGTGGACACTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 90 bp GCTCACCATGCTAAGAAGACTGCCTCTTTCCAGGCAAGATTTTACTaGAGCAACATAACCGGAGGGTGTGATTCCAAAATACCTTCCTTT +
Preference number: 1 (lower is better)
Translates to: AHHAKKTASFQARFY*SNITGGCDSKIPSF
Trigger: AAAGGAAGGTATTTTGGAATCACACCCTCCGGTTATGTTGCTCCAGTAAAATCTTGCCTGGAAAGAGGCAGTCTTCTTAGCATGGTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR TCA 90 bp TACCACTTACCCAGCACCTTCAATGTGACCAGTGCTCAACTCAGATaGCAACAACCTGCAAGTAGGTATTACTATCCCTTTCAACTAATG +
Preference number: 1 (lower is better)
Translates to: YHLPSTFNVTSAQLR*QQPASRYYYPFQLM
Trigger: CATTAGTTGAAAGGGATAGTAATACCTACTTGCAGGTTGTTGTCATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGGTAAGTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 90 bp CATCTCCACCCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTaGCCAAAGAAACTGGCTACAATTCTGATTCTAAAGAAAACCTTC +
Preference number: 1 (lower is better)
Translates to: HLHPSLSVISKYSSF*PKKLATILILKKTF
Trigger: GAAGGTTTTCTTTAGAATCAGAATTGTAGCCAGTTTCTTTGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGGGTGGAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp GGGAAGATGCCTGACCACTCACACGTGTCTGTCTCTCCAGGCGGGCTCCAGCTCCTCCCCAGCCCCTGCTaGAGAGCAGCGCGGACCCAC +
Preference number: 2 (lower is better)
Translates to: GKMPDHSHVSVSPGGLQLLPSPC*RAARTH
Trigger: GTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGGGAG...GAGCTGGAGCCCGCCTGGAGAGACAGACACGTGTGAGTGGTCAGGCATCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp CCCAGCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTGGCACCAGCATGTCCTaGACCACGTGGTGCTGCTCG +
Preference number: 2 (lower is better)
Translates to: PSPCCRAARTHSHQDKVGGTSMS*TTWCCS
Trigger: CGAGCAGCACCACGTGGTGCAGGACATGCTGGTGCC...ACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GGTGGGGAAGAGCTGTCCTTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGGGACTCAGTGGTGGCTaGGGTGGGCCTGCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: GGEELSFSCEDLVWLMEAGLSGG*GGPAGP
Trigger: TGGGCCTGCAGGCCCACCCCAGCCACCACTGAGTCC...CGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGCTCTTCCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp CCCAGCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTCTCCACTTTCCCACCTaGTGCTGTCCACTCCCCAGC +
Preference number: 2 (lower is better)
Translates to: PSPCCRAARTHSHQDKVGLHFPT*CCPLPS
Trigger: GCTGGGGAGTGGACAGCATCAGGTGGGAAAGTGGAG...ACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CAA 90 bp GCCTCCAGGCCCCGCACTGGCTCGAAACGCAGCTTGACGTACTTCTaGGCAGGGATGATGCGGATCTCAGCGGCCACCAGGAAACCCAGC +
Preference number: 2 (lower is better)
Translates to: ASRPRTGSKRSLTYF*AGMMRISAATRKPS
Trigger: GCTGGGTTTCCTGGTGGCCGCTGAGATCCGCATCATCCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGCCAGTGCGGGGCCTGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CAA 90 bp CCTTCCACGAAGTGGTTCTCCTGCCGCTGGGACTCGTGGGTGAACTaGGCACAGATAGCCTCCAGGCCCCGCACTGGCTCGAAACGCAGC +
Preference number: 2 (lower is better)
Translates to: PSTKWFSCRWDSWVN*AQIASRPRTGSKRS
Trigger: GCTGCGTTTCGAGCCAGTGCGGGGCCTGGAGGCTATCTGTGCCAAGTTCACCCACGAGTCCCAGCGGCAGGAGAACCACTTCGTGGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp GCCTGCTGCAGGCACTTCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTGCGCTCCCAGAAGATGCTaGGCGTGTGGCGGTGGTAGT +
Preference number: 2 (lower is better)
Translates to: ACCRHFMGTSMSCTTWCCAPRRC*ACGGGS
Trigger: ACTACCACCGCCACACGCGCAGCATCTTCTGGGAGC...GCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CCCAGCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTAAGCCAGGAGGAAGGTaGTGTTGGGCTGTCAGGGTG +
Preference number: 2 (lower is better)
Translates to: PSPCCRAARTHSHQDKVGKPGGR*CWAVRV
Trigger: CACCCTGACAGCCCAACACCACCTTCCTCCTGGCTT...ACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGTTGGCACAGCGCATCTaGGGCCTCCCCACTCCGTGG +
Preference number: 2 (lower is better)
Translates to: FSCEDLVWLMEAMAGQLQLAQRI*GLPTPW
Trigger: CCACGGAGTGGGGAGGCCCCAGATGCGCTGTGCCAA...CTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp ACCAGCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGGTCTCACCTCGGACCTGGCTTTaGCACAGCGCATCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: TSMSCTTWCCSYSLRRVSPRTWL*HSASGA
Trigger: GGCCCCAGATGCGCTGTGCCAAAGCCAGGTCCGAGG...TGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGGGACTCAGTGGTGGCTaGGGTGGGCCTGCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: AGQLQRIPFIIPAMAVHRGLSGG*GGPAGP
Trigger: TGGGCCTGCAGGCCCACCCCAGCCACCACTGAGTCC...CCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CTGCTGCAGGCACTTCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTGCTCCGCAGGGTCTCACCCTaGGTCAGCTTCAGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: LLQALHGHQHVLHHVVLLRRVSP*VSFRRE
Trigger: CTCCCTCCTGAAGCTGACCCAGGGTGAGACCCTGCG...GAGCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp CCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCCTGCTAAGACACTGGGGAGCTCCCAGAAGATaGTGCGCGTGTGGCGGTGGT +
Preference number: 2 (lower is better)
Translates to: PSECLDAPSPHKTLLRHWGAPRR*CACGGG
Trigger: ACCACCGCCACACGCGCAGCATCTTCTGGGAGCTCC...CCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp TCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTAAGGTGTGCAGGGCCTaGTGCAGGCACTTCATGGGC +
Preference number: 2 (lower is better)
Translates to: SCEDLVWLMEAMAGQLQRKVCRA*CRHFMG
Trigger: GCCCATGAAGTGCCTGCAGCAGGCCCTGCACACCTT...ACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp GGGAAGATGCCTGACCACTCACACGTGTCTGTCTCTCCAGGCGGGCTCCAGCTCAAGGTGTGCAGGGCCTaGTGCAGGCACTTCATGGGC +
Preference number: 2 (lower is better)
Translates to: GKMPDHSHVSVSPGGLQLKVCRA*CRHFMG
Trigger: GCCCATGAAGTGCCTGCAGCAGGCCCTGCACACCTT...GAGCTGGAGCCCGCCTGGAGAGACAGACACGTGTGAGTGGTCAGGCATCTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AGTGCCTGGCGGCCTTGCAGATCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCGGACGGCACCAAGGATaGCAGGGAGAACTTTGGCCT +
Preference number: 2 (lower is better)
Translates to: SAWRPCRSCRTPRGRRPGGRHQG*QGELWP
Trigger: AGGCCAAAGTTCTCCCTGCCATCCTTGGTGCCGTCC...GCCAGGACGCCTTCCCCGAGGTGTACGACAAGATCTGCAAGGCCGCCAGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GCACCAGCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGGTCTCAGTCACCTGGCCCATaGTCACCAAGGGCTCCACAC +
Preference number: 2 (lower is better)
Translates to: APACPAPRGAARTACAGSQSPGP*SPRAPH
Trigger: GTGTGGAGCCCTTGGTGACCATGGGCCAGGTGACTG...AGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CCCCAGCCCTCACAAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTAGCAGGGCAGTCACCTaGCCCATGGTCACCAAGGGC +
Preference number: 2 (lower is better)
Translates to: PQPSQDPAKTLAVCQALGSRAVT*PMVTKG
Trigger: GCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCT...ACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GTGCCTGGCGGCCTTGCAGATCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCAGCTGCAGGCACTTCATaGGCACCAGCATGTCCTGCA +
Preference number: 2 (lower is better)
Translates to: VPGGLADLVVHLGEGVLAAAGTS*APACPA
Trigger: TGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGC...TGCCAGGACGCCTTCCCCGAGGTGTACGACAAGATCTGCAAGGCCGCCAGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCCTGCTAAGACACTGGGCAGAGGCAGAGAAGTaGGTGAGGACGCCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: PSECLDAPSPHKTLLRHWAEAEK*VRTPGG
Trigger: GCCTCCTGGCGTCCTCACCCACTTCTCTGCCTCTGC...CCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR CAA 90 bp TTGGCACAGATAGCCTCCAGGCCCCGCACTGGCTCGAAACGCAGCTaGACGTACTTCTTGGCAGGGATGATGCGGATCTCAGCGGCCACC +
Preference number: 2 (lower is better)
Translates to: LAQIASRPRTGSKRS*TYFLAGMMRISAAT
Trigger: GGTGGCCGCTGAGATCCGCATCATCCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGCCAGTGCGGGGCCTGGAGGCTATCTGTGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp AGGGTGGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCGGCCTGCAGGGTTGGTaGGCCAAGAAGAATGAGCCC +
Preference number: 2 (lower is better)
Translates to: RVVPLPSECLDAPSPHKTGLQGW*AKKNEP
Trigger: GGGCTCATTCTTCTTGGCTCACCAACCCTGCAGGCC...GGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp TTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGGGTTCCTTTGCCTTCTaGGTGCCTGGATGCCCCCAG +
Preference number: 2 (lower is better)
Translates to: FSCEDLVWLMEAMAGQLQGSFAF*VPGCPQ
Trigger: CTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACC...CTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp CTAGGAAAGCAGCCAAGCTTGAGTGAAGGGAAGATGCCTGACCACTCACACGTGCTCCCCAGCCCCTGCTaGAGAGCAGCGCGGACCCAC +
Preference number: 2 (lower is better)
Translates to: LGKQPSLSEGKMPDHSHVLPSPC*RAARTH
Trigger: GTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGGGAG...CACGTGTGAGTGGTCAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp AGTAGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTCTCCCCAGCCCCTGCTaGAGAGCAGCGCGGACCCAC +
Preference number: 2 (lower is better)
Translates to: SREGLKPRSPDSHATTMTLPSPC*RAARTH
Trigger: GTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGGGAG...AGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp ACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCACCCACTCCCCAGCCCCTaGTGCAGAGCAGCGCGGACC +
Preference number: 2 (lower is better)
Translates to: TADVTLNGKQQELPLTQHPLPSP*CRAART
Trigger: GGTCCGCGCTGCTCTGCAGCAGGGGCTGGGGAGTGG...GTGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp CACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCACCACTCCCCAGCCCCTaGTGCAGAGCAGCGCGGACC +
Preference number: 2 (lower is better)
Translates to: HCRCDAEREATRATTYPAPLPSP*CRAART
Trigger: GGTCCGCGCTGCTCTGCAGCAGGGGCTGGGGAGTGG...TGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp GGATCCAATTCAGAGCGGAGACCACTCTCTCCACCTAGGTGTCCCAGGCTGAGGGGAGCTCCCAGAAGATaGTGCGCGTGTGGCGGTGGT +
Preference number: 2 (lower is better)
Translates to: GSNSERRPLSPPRCPRLRGAPRR*CACGGG
Trigger: ACCACCGCCACACGCGCAGCATCTTCTGGGAGCTCC...CCTCAGCCTGGGACACCTAGGTGGAGAGAGTGGTCTCCGCTCTGAATTGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp ATCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCTGCACCACGTGGTGCTaGTCGTACAGCTTGCGCAGG +
Preference number: 2 (lower is better)
Translates to: ILSYTSGKASWQPSFSRSCTTWC*SYSLRR
Trigger: CCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCA...GCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGAGGTGTACGACAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTGTTGGGCTGTCAGGGTaGGAGTTCTGGAGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: SCEDLVWLMEAMAGQLQRVGLSG*EFWRGF
Trigger: GAAACCCCTCCAGAACTCCCACCCTGACAGCCCAAC...ACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTTTTGTGGCAGGGAGAACTTTaGCCTCGGACCTGGCTTTGG +
Preference number: 2 (lower is better)
Translates to: APAAEQRGPTPTKTKWVLWQGEL*PRTWLW
Trigger: CCAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCA...CAAAACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGTGACCGAGTGGACTCAGTGGTaGCTGGGGTGGGCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: ATPAYPLHHSSHGCAQVTEWTQW*LGWACR
Trigger: CCTGCAGGCCCACCCCAGCCACCACTGAGTCCACTC...GGTCACCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCCTGCTAAGACACTGGTGCCTTCTGAGTGCCTaGATGCCCCCAGCCCTCACA +
Preference number: 2 (lower is better)
Translates to: PSECLDAPSPHKTLLRHWCLLSA*MPPALT
Trigger: TGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCA...CCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp ATGGGTAGGGTGGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACCAGTCACCTGGCCCATaGTCACCAAGGGCTCCACAC +
Preference number: 2 (lower is better)
Translates to: MGRVVPLPSECLDAPSPHQSPGP*SPRAPH
Trigger: GTGTGGAGCCCTTGGTGACCATGGGCCAGGTGACTG...GTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp ATGGGTAGGGTGGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACTGCACTAGGCCTGGCTaGCTGGGCAGGATGAACGGA +
Preference number: 2 (lower is better)
Translates to: MGRVVPLPSECLDAPSPHCTRPG*LGRMNG
Trigger: TCCGTTCATCCTGCCCAGCCAGCCAGGCCTAGTGCA...GTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AGTGCCTGGCGGCCTTGCAGATCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCCTGCCTCATTTCCTTTaGGGTGCACTAGGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: SAWRPCRSCRTPRGRRPGLPHFL*GALGLA
Trigger: AGCCAGGCCTAGTGCACCCCAAAGGAAATGAGGCAG...GCCAGGACGCCTTCCCCGAGGTGTACGACAAGATCTGCAAGGCCGCCAGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CAA 90 bp CTTTCTTCTGCCCCCTCCAGAGGCCAAATGGGTAGGGTGGTTCCTTaGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCCTG +
Preference number: 2 (lower is better)
Translates to: LSSAPSRGQMGRVVP*PSECLDAPSPHKTL
Trigger: CAGGGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACCCATTTGGCCTCTGGAGGGGGCAGAAGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CAA 90 bp CCTGACCCAGAGGCTGCCACAGCTGCAGGGGCCCTAAGGAACCAGTaGATAGGCTTGGGGCTCCTGGTTCTCCATAGAGCTGGCCTCATT +
Preference number: 2 (lower is better)
Translates to: PDPEAATAAGALRNQ*IGLGLLVLHRAGLI
Trigger: AATGAGGCCAGCTCTATGGAGAACCAGGAGCCCCAAGCCTATCAACTGGTTCCTTAGGGCCCCTGCAGCTGTGGCAGCCTCTGGGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR CAA 90 bp AGAGTCAGGAGTAGAGCTCAGACTGCTGGGCTTCTGCCCCTCTGCTaGGCCAGAGGCACAGCTGCCTTCCCTAATGGAGCAGTGGGGTTG +
Preference number: 2 (lower is better)
Translates to: RVRSRAQTAGLLPLC*ARGTAAFPNGAVGL
Trigger: CAACCCCACTGCTCCATTAGGGAAGGCAGCTGTGCCTCTGGCCAAGCAGAGGGGCAGAAGCCCAGCAGTCTGAGCTCTACTCCTGACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR-3UTR TCA 90 bp AATGCCTTCTCCAGGAACACAGGGCACTCCGAGTGGACTCAGTGGTGGCTGGGGGCTGTCCTTCTCCTGTaGGGACCTCGTCTGGCTGAT +
Preference number: 2 (lower is better)
Translates to: NAFSRNTGHSEWTQWWLGAVLLL*GPRLAD
Trigger: ATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGC...CCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGTGTTCCTGGAGAAGGCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp GGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCGCTGTCCTTCTCCTGTaGGGACCTCGTCTGGCTGAT +
Preference number: 2 (lower is better)
Translates to: GGDGRATPAYPLHHSSHGAVLLL*GPRLAD
Trigger: ATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGC...GCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp AGGGTGGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCGTGAGCCAAGAAGAATaGGCCCAGGTCCCCTGGATC +
Preference number: 2 (lower is better)
Translates to: RVVPLPSECLDAPSPHKTVSQEE*AQVPWI
Trigger: GATCCAGGGGACCTGGGCTCATTCTTCTTGGCTCAC...GGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp TTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGGTGAGCCAAGAAGAATaGGCCCAGGTCCCCTGGATC +
Preference number: 2 (lower is better)
Translates to: FSCEDLVWLMEAMAGQLQVSQEE*AQVPWI
Trigger: GATCCAGGGGACCTGGGCTCATTCTTCTTGGCTCAC...CTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp AGTCGGCATACAGCATCTGGAAGCCATGCACGCTGCGGACAAACTTCTCCAGCTTCCCCACTCCGTGGCTaGCCTCCTGAGATCCCAGGG +
Preference number: 2 (lower is better)
Translates to: SRHTASGSHARCGQTSPASPLRG*PPEIPG
Trigger: CCCTGGGATCTCAGGAGGGCAGCCACGGAGTGGGGA...AGCTGGAGAAGTTTGTCCGCAGCGTGCATGGCTTCCAGATGCTGTATGCCGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000648728.1
3UTR-3UTR GCA 90 bp GGGAAGATGCCTGACCACTCACACGTGTCTGTCTCTCCAGGCGGGCTCCAGCTCGGGAAAGATGAGGCCTaGAGGGTTGGTGAGCCAAGA +
Preference number: 2 (lower is better)
Translates to: GKMPDHSHVSVSPGGLQLGKDEA*RVGEPR
Trigger: TCTTGGCTCACCAACCCTGCAGGCCTCATCTTTCCC...GAGCTGGAGCCCGCCTGGAGAGACAGACACGTGTGAGTGGTCAGGCATCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGAGGACCTCGTCTaGCTGATGGAGGCGATGGCA +
Preference number: 2 (lower is better)
Translates to: GGDGRATPAYPLHHSSHGCEDLV*LMEAMA
Trigger: TGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACA...GCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TCGGGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCTTGTGGTACAAGGAGTGTGAGGACCTCGTCTaGCTGATGGAGGCGATGGCA +
Preference number: 2 (lower is better)
Translates to: SGKASWQPSFSRSLWYKECEDLV*LMEAMA
Trigger: TGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACA...CTCCTTGTACCACAAGCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCCTGCTAAGACACTGGCTTTGGCCTCGGACCTaGCTTTGGCACAGCGCATCT +
Preference number: 2 (lower is better)
Translates to: PSECLDAPSPHKTLLRHWLWPRT*LWHSAS
Trigger: AGATGCGCTGTGCCAAAGCCAGGTCCGAGGCCAAAG...CCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AGGGTGGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCTGGCAGGGAGAACTTTaGCCTCGGACCTGGCTTTGG +
Preference number: 2 (lower is better)
Translates to: RVVPLPSECLDAPSPHKTWQGEL*PRTWLW
Trigger: CCAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCA...GGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGACGGCACCAAGGATaGCAGGGAGAACTTTGGCCT +
Preference number: 2 (lower is better)
Translates to: SWAPACPAPRGAARTACAGRHQG*QGELWP
Trigger: AGGCCAAAGTTCTCCCTGCCATCCTTGGTGCCGTCC...TGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTCCTCCAGAGGCCAAATaGGTAGGGTGGTTCCTTTGC +
Preference number: 2 (lower is better)
Translates to: SCEDLVWLMEAMAGQLQRPPEAK*VGWFLC
Trigger: GCAAAGGAACCACCCTACCCATTTGGCCTCTGGAGG...ACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGGGAGAGTCCAGCCAATaGAGGTCAGCAGGGCAGTCA +
Preference number: 2 (lower is better)
Translates to: FSCEDLVWLMEAMAGQLQGESSQ*RSAGQS
Trigger: TGACTGCCCTGCTGACCTCCATTGGCTGGACTCTCC...CTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTCTCCAGGCCCCGCACTaGCTCGAAACGCAGCTTGAC +
Preference number: 2 (lower is better)
Translates to: GLKPRSPDSHATTMTGSALQAPH*LETQLD
Trigger: GTCAAGCTGCGTTTCGAGCCAGTGCGGGGCCTGGAG...AGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCATGGTTCTCCTGCCGCTaGGACTCGTGGGTGAACTTG +
Preference number: 2 (lower is better)
Translates to: SWAPACPAPRGAARTACAWFSCR*DSWVNL
Trigger: CAAGTTCACCCACGAGTCCCAGCGGCAGGAGAACCA...TGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AATGCCTTCTCCAGGAACACAGGGCACTCCGAGTGGACTCAGTGGTGGCTGGGGTCGGCATACAGCATCTaGAAGCCATGCACGCTGCGG +
Preference number: 2 (lower is better)
Translates to: NAFSRNTGHSEWTQWWLGSAYSI*KPCTLR
Trigger: CCGCAGCGTGCATGGCTTCCAGATGCTGTATGCCGA...CCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGTGTTCCTGGAGAAGGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000648728.1
3UTR CAA 90 bp TACACCTCGGGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCTaGTGGTACAAGGAGCCATCAAACATCTCCCAGAACTCCTCCCGG +
Preference number: 2 (lower is better)
Translates to: YTSGKASWQPSFSRS*WYKEPSNISQNSSR
Trigger: CCGGGAGGAGTTCTGGGAGATGTTTGATGGCTCCTTGTACCACAAGCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGAGGTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp GCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGGTGAGCCAAGAAGAATaGGCCCAGGTCCCCTGGATC +
Preference number: 2 (lower is better)
Translates to: AGQLQRIPFIIPAMAVHRVSQEE*AQVPWI
Trigger: GATCCAGGGGACCTGGGCTCATTCTTCTTGGCTCAC...CCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp GAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGGCCTGCAGGGTTGGTaGGCCAAGAAGAATGAGCCC +
Preference number: 2 (lower is better)
Translates to: EGLKPRSPDSHATTMTGSGLQGW*AKKNEP
Trigger: GGGCTCATTCTTCTTGGCTCACCAACCCTGCAGGCC...TGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp GCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGTGACCCTCCACTTTCCCACCTaGTGCTGTCCACTCCCCAGC +
Preference number: 2 (lower is better)
Translates to: ATPAYPLHHSSHGCAQVTLHFPT*CCPLPS
Trigger: GCTGGGGAGTGGACAGCATCAGGTGGGAAAGTGGAG...GGTCACCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp GGTGGGGAAGAGCTGTCCTTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGACAGTAGAGAGGGGCTaGAACCTAGGTCTCCTGACT +
Preference number: 2 (lower is better)
Translates to: GGEELSFSCEDLVWLMEATVERG*NLGLLT
Trigger: AGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACTGT...CGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGCTCTTCCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp CCCAGCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTCACATGGGTCTCCTATaGGAGCTAATGCCAGAATTC +
Preference number: 2 (lower is better)
Translates to: PSPCCRAARTHSHQDKVGHMGLL*ELMPEF
Trigger: GAATTCTGGCATTAGCTCTCATAGGAGACCCATGTG...ACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp CGCAGCTTGTGGTACAAGGAGCCATCAAACATCTCCCAGAACTCCTCCCGGTTCTCCATTCCACTGGGCTaGCCCCTGGAAGCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: RSLWYKEPSNISQNSSRFSIPLG*PLEARR
Trigger: CCTCCTGGCTTCCAGGGGGCAGCCCAGTGGAATGGA...GAACCGGGAGGAGTTCTGGGAGATGTTTGATGGCTCCTTGTACCACAAGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp CTGTGCACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACTCCCCACTCCGTGGCTaGCCTCCTGAGATCCCAGGG +
Preference number: 2 (lower is better)
Translates to: LCTGDLMWSLFRLHCRCDSPLRG*PPEIPG
Trigger: CCCTGGGATCTCAGGAGGGCAGCCACGGAGTGGGGA...GTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGTGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp ATACTATACTCTGGGCCACTCACCCATGCACGCTGCGGACAAACTTCTCCAGCTTCCCCACTCCGTGGCTaGCCTCCTGAGATCCCAGGG +
Preference number: 2 (lower is better)
Translates to: ILYSGPLTHARCGQTSPASPLRG*PPEIPG
Trigger: CCCTGGGATCTCAGGAGGGCAGCCACGGAGTGGGGA...AGCTGGAGAAGTTTGTCCGCAGCGTGCATGGGTGAGTGGCCCAGAGTATAGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR-3UTR GCA 90 bp TCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTAGCATCTGGAAGCCATaGACGCTGCGGACAAACTTC +
Preference number: 2 (lower is better)
Translates to: SCEDLVWLMEAMAGQLQRSIWKP*TLRTNF
Trigger: GAAGTTTGTCCGCAGCGTGCATGGCTTCCAGATGCT...ACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000648728.1
3UTR-3UTR CCA 90 bp TCCCCTGGATCCAATTCAGAGCGGAGACCACTCTCTCCACCTAGGTGTCCCAGGTGTGAGGACCTCGTCTaGCTGATGGAGGCGATGGCA +
Preference number: 2 (lower is better)
Translates to: SPGSNSERRPLSPPRCPRCEDLV*LMEAMA
Trigger: TGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACA...CCTGGGACACCTAGGTGGAGAGAGTGGTCTCCGCTCTGAATTGGATCCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TCCCCTGGATCCAATTCAGAGCGGAGACCACTCTCTCCACCTAGGTGTCCCAGGTGGCAGGGAGAACTTTaGCCTCGGACCTGGCTTTGG +
Preference number: 2 (lower is better)
Translates to: SPGSNSERRPLSPPRCPRWQGEL*PRTWLW
Trigger: CCAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCA...CCTGGGACACCTAGGTGGAGAGAGTGGTCTCCGCTCTGAATTGGATCCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGTGACCTGGCCACCGTCCCAGTaGCTTAGGGTTGGAGGCTTC +
Preference number: 2 (lower is better)
Translates to: ATPAYPLHHSSHGCAQVTWPPSQ*LRVGGF
Trigger: GAAGCCTCCAACCCTAAGCCACTGGGACGGTGGCCA...GGTCACCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TGCAGCTCAGAGGACAATGACTTGCCCACGTTGCACAGCTCGCTGACAGTAGAGCTCCAGGCCCCGCACTaGCTCGAAACGCAGCTTGAC +
Preference number: 2 (lower is better)
Translates to: CSSEDNDLPTLHSSLTVELQAPH*LETQLD
Trigger: GTCAAGCTGCGTTTCGAGCCAGTGCGGGGCCTGGAG...CTCTACTGTCAGCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGAGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AGGGTGGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCATGTCCTGCACCACGTaGTGCTGCTCGTACAGCTTG +
Preference number: 2 (lower is better)
Translates to: RVVPLPSECLDAPSPHKTMSCTT*CCSYSL
Trigger: CAAGCTGTACGAGCAGCACCACGTGGTGCAGGACAT...GGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp ATGGGTAGGGTGGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACACGGACACAGCCAGATaGGGTAGACGTGGATGTCGT +
Preference number: 2 (lower is better)
Translates to: MGRVVPLPSECLDAPSPHTDTAR*GRRGCR
Trigger: ACGACATCCACGTCTACCCCATCTGGCTGTGTCCGT...GTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp ATCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCGAAAGCAGCCAAGCTTaGGTGAAGGGAAGATGCCTG +
Preference number: 2 (lower is better)
Translates to: ILSYTSGKASWQPSFSRSESSQA*VKGRCL
Trigger: CAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTC...GCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGAGGTGTACGACAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp TCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTGGACTCAGGCTTGTCTaGCTCCAAATCCCACATTCT +
Preference number: 2 (lower is better)
Translates to: SCEDLVWLMEAMAGQLQRGLRLV*LQIPHS
Trigger: AGAATGTGGGATTTGGAGTCAGACAAGCCTGAGTCC...ACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp CCCCAGCCCTCACAAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTACAGTAGAGAGGGGCTaGAACCTAGGTCTCCTGACT +
Preference number: 2 (lower is better)
Translates to: PQPSQDPAKTLAVCQALGTVERG*NLGLLT
Trigger: AGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACTGT...ACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp CTCCAGCTGCCTCATGCAGGACCTGGCTTCAAAGTGTTTCACACGCGGCTCCCCGGCATAGAACAGGTCTaGGTTTTCGGACGGAGTGCA +
Preference number: 2 (lower is better)
Translates to: LQLPHAGPGFKVFHTRLPGIEQV*VFGRSA
Trigger: TGCACTCCGTCCGAAAACTCAGACCTGTTCTATGCC...GGGGAGCCGCGTGTGAAACACTTTGAAGCCAGGTCCTGCATGAGGCAGCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp CGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGTCCATTCCACTGGGCTaGCCCCTGGAAGCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: RHNHDWLSSLNSSFPYMTSIPLG*PLEARR
Trigger: CCTCCTGGCTTCCAGGGGGCAGCCCAGTGGAATGGA...CGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp ACAAGACAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGCCACTCCCCAGCCCCTaGTGCAGAGCAGCGCGGACC +
Preference number: 2 (lower is better)
Translates to: TRQMLPCKPGMSLSGNEMPLPSP*CRAART
Trigger: GGTCCGCGCTGCTCTGCAGCAGGGGCTGGGGAGTGG...CATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTGTCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp CCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCCTGCTAAGACACTGGGTAGGGTGGTTCCTTTaGCTTCTGAGTGCCTGGATG +
Preference number: 2 (lower is better)
Translates to: PSECLDAPSPHKTLLRHWVGWFL*LLSAWM
Trigger: CATCCAGGCACTCAGAAGGCAAAGGAACCACCCTAC...CCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp CCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCCTGCTAAGACACTGGGACAGGGAAGATTCATaGCTTTCTCCTTGGCCCCCA +
Preference number: 2 (lower is better)
Translates to: PSECLDAPSPHKTLLRHWDREDS*LSPWPP
Trigger: TGGGGGCCAAGGAGAAAGGCATGAATCTTCCCTGTC...CCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp TTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCCAGCTCGTAAGCAGTaGAGATGTGTTGGAACAGGC +
Preference number: 2 (lower is better)
Translates to: FSCEDLVWLMEAMAGQLQPARKQ*RCVGTG
Trigger: GCCTGTTCCAACACATCTGCACTGCTTACGAGCTGG...CTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp CTGTGCACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGTGTGCAGGGCCTGCTaGAGGCACTTCATGGGCACC +
Preference number: 2 (lower is better)
Translates to: LCTGDLMWSLFRLHCRCDVCRAC*RHFMGT
Trigger: GGTGCCCATGAAGTGCCTGCAGCAGGCCCTGCACAC...GTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGTGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp ATACTATACTCTGGGCCACTCACCCATGCACGCTGCGGACAAACTTCTCCAGCTGTGTGCAGGGCCTGCTaGAGGCACTTCATGGGCACC +
Preference number: 2 (lower is better)
Translates to: ILYSGPLTHARCGQTSPAVCRAC*RHFMGT
Trigger: GGTGCCCATGAAGTGCCTGCAGCAGGCCCTGCACAC...AGCTGGAGAAGTTTGTCCGCAGCGTGCATGGGTGAGTGGCCCAGAGTATAGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR-3UTR CCA 90 bp CTCGAAACGCAGCTTGACGTACTTCTTGGCAGGGATGATGCGGATCTCAGCGGCGTTGGGCTGTCAGGGTaGGAGTTCTGGAGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: LETQLDVLLGRDDADLSGVGLSG*EFWRGF
Trigger: GAAACCCCTCCAGAACTCCCACCCTGACAGCCCAAC...GCCGCTGAGATCCGCATCATCCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGTGACCAAGCCAGGAGGAAGGTaGTGTTGGGCTGTCAGGGTG +
Preference number: 2 (lower is better)
Translates to: ATPAYPLHHSSHGCAQVTKPGGR*CWAVRV
Trigger: CACCCTGACAGCCCAACACCACCTTCCTCCTGGCTT...GGTCACCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTCTTTGGCCTCGGACCTaGCTTTGGCACAGCGCATCT +
Preference number: 2 (lower is better)
Translates to: GLKPRSPDSHATTMTGSALWPRT*LWHSAS
Trigger: AGATGCGCTGTGCCAAAGCCAGGTCCGAGGCCAAAG...AGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTGGACTCAGTGGTGGCTaGGGTGGGCCTGCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: GCDSKIPSFPSPGLWIRSGLSGG*GGPAGP
Trigger: TGGGCCTGCAGGCCCACCCCAGCCACCACTGAGTCC...AGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTGACCTTGAGTGGACTCAGTGGTaGCTGGGGTGGGCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: LPCKPGMSLSGNEMGADLEWTQW*LGWACR
Trigger: CCTGCAGGCCCACCCCAGCCACCACTGAGTCCACTC...AAGGTCAGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATTCCGAGTGGACTCAGTaGTGGCTGGGGTGGGCCTGC +
Preference number: 2 (lower is better)
Translates to: YNKPGKDLGRFPSLWNGNSEWTQ*WLGWAC
Trigger: GCAGGCCCACCCCAGCCACCACTGAGTCCACTCGGA...ATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp ACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGCTGAATCCGAGTGGACTCAGTaGTGGCTGGGGTGGGCCTGC +
Preference number: 2 (lower is better)
Translates to: TGDLMWSLFRLHCRCDAESEWTQ*WLGWAC
Trigger: GCAGGCCCACCCCAGCCACCACTGAGTCCACTCGGA...TTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTGACCTTTCCGAGTGGACTCAGTaGTGGCTGGGGTGGGCCTGC +
Preference number: 2 (lower is better)
Translates to: LPCKPGMSLSGNEMGADLSEWTQ*WLGWAC
Trigger: GCAGGCCCACCCCAGCCACCACTGAGTCCACTCGGA...AAGGTCAGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GGTGGGGAAGAGCTGTCCTTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGGAAATTAACTACAGCTaGGGTGGGGAGTGGTGGAAG +
Preference number: 2 (lower is better)
Translates to: GGEELSFSCEDLVWLMEAEINYS*GGEWWK
Trigger: CTTCCACCACTCCCCACCCCAGCTGTAGTTAATTTC...CGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGCTCTTCCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCCGCCACAACCATGACTaGCTCAGCTCCCTTAATTCC +
Preference number: 2 (lower is better)
Translates to: GGDGRATPAYPLHHSSHGRHNHD*LSSLNS
Trigger: GGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG...GCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGAGAAACTCAGGGCTCTaGAGGGGAGAGCCTTACTCT +
Preference number: 2 (lower is better)
Translates to: FSCEDLVWLMEAMAGQLQRNSGL*RGEPYS
Trigger: AGAGTAAGGCTCTCCCCTCCAGAGCCCTGAGTTTCT...CTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCACGCAGGGTCTCACCCTaGGTCAGCTTCAGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: HCRCDAEREATRATTYPARRVSP*VSFRRE
Trigger: CTCCCTCCTGAAGCTGACCCAGGGTGAGACCCTGCG...TGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTGCCTCATGCAGGACCTaGCTTCAAAGTGTTTCACAC +
Preference number: 2 (lower is better)
Translates to: SCEDLVWLMEAMAGQLQRASCRT*LQSVSH
Trigger: GTGTGAAACACTTTGAAGCCAGGTCCTGCATGAGGC...ACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp GCGCGTGTGGCGGTGGTAGTAGTGTCTCAAGGGAATGTACTCCAGGCCCTCTCGGGACTCAGGCTTGTCTaGCTCCAAATCCCACATTCT +
Preference number: 2 (lower is better)
Translates to: ARVAVVVVSQGNVLQALSGLRLV*LQIPHS
Trigger: AGAATGTGGGATTTGGAGTCAGACAAGCCTGAGTCC...CGAGAGGGCCTGGAGTACATTCCCTTGAGACACTACTACCACCGCCACACGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp CTCCAGCTGCCTCATGCAGGACCTGGCTTCAAAGTGTTTCACACGCGGCTCCCCCCAGCACCTTCAATGTaGCCAGTGCTCAACTCAGAT +
Preference number: 2 (lower is better)
Translates to: LQLPHAGPGFKVFHTRLPPAPSM*PVLNSD
Trigger: ATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGG...GGGGAGCCGCGTGTGAAACACTTTGAAGCCAGGTCCTGCATGAGGCAGCTGGAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp TCGGGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCTTGTGGTACAAGGAGCCAGCACCTTCAATGTaGCCAGTGCTCAACTCAGAT +
Preference number: 2 (lower is better)
Translates to: SGKASWQPSFSRSLWYKEPAPSM*PVLNSD
Trigger: ATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGG...CTCCTTGTACCACAAGCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp TCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTTCATCAGTTTTGCACTaGGCAAGGAAGCACATGGGT +
Preference number: 2 (lower is better)
Translates to: SCEDLVWLMEAMAGQLQRSSVLH*ARKHMG
Trigger: ACCCATGTGCTTCCTTGCTCAGTGCAAAACTGATGA...ACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp GCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGGTGGCTGTAAGAGCCTaGCAGGGAAGATTCATGCCT +
Preference number: 2 (lower is better)
Translates to: AGQLQRIPFIIPAMAVHRVAVRA*QGRFMP
Trigger: AGGCATGAATCTTCCCTGTCAGGCTCTTACAGCCAC...CCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp CTTCAGGAGGGAGATCTTGGGAGGCACCATCCAGCCAAAGAGGTAGCGGAAGATACTTCTTGGCAGGGATaGTGCGGATCTCAGCGGCCA +
Preference number: 2 (lower is better)
Translates to: LQEGDLGRHHPAKEVAEDTSWQG*CGSQRP
Trigger: TGGCCGCTGAGATCCGCATCATCCCTGCCAAGAAGT...ATCTTCCGCTACCTCTTTGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp AGTTGCATAAACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGCTCCCCAGCCCCTGCTaGAGAGCAGCGCGGACCCAC +
Preference number: 2 (lower is better)
Translates to: SCINNQALRYNKPGKDLGLPSPC*RAARTH
Trigger: GTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGGGAG...CCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTATGCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp TTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGAGACAGATGCTTCCCTaGAAGCCAGGTATGAGCCTT +
Preference number: 2 (lower is better)
Translates to: FSCEDLVWLMEAMAGQLQRQMLP*KPGMSL
Trigger: AAGGCTCATACCTGGCTTGCAGGGAAGCATCTGTCT...CTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp CTAGGAAAGCAGCCAAGCTTGAGTGAAGGGAAGATGCCTGACCACTCACACGTGGCTCCCAGAAGATGCTaGGCGTGTGGCGGTGGTAGT +
Preference number: 2 (lower is better)
Translates to: LGKQPSLSEGKMPDHSHVAPRRC*ACGGGS
Trigger: ACTACCACCGCCACACGCGCAGCATCTTCTGGGAGC...CACGTGTGAGTGGTCAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp ACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGCTGAAGCTGCTCGTACAGCTTaGGCAGGGTCTCACCCTGGG +
Preference number: 2 (lower is better)
Translates to: TGDLMWSLFRLHCRCDAEAARTA*AGSHPG
Trigger: CCCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGC...TTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp ACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCACTCCTGCACCACGTGGTaGTGCTCGTACAGCTTGCGC +
Preference number: 2 (lower is better)
Translates to: TADVTLNGKQQELPLTQHSCTTW*CSYSLR
Trigger: GCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGA...GTGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp GCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGTGACCGGAAGCCATGCACGCTaGGGACAAACTTCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: ATPAYPLHHSSHGCAQVTGSHAR*GQTSPA
Trigger: AGCTGGAGAAGTTTGTCCGCAGCGTGCATGGCTTCC...GGTCACCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000648728.1
3UTR-3UTR CCA 90 bp TGCAGCTCAGAGGACAATGACTTGCCCACGTTGCACAGCTCGCTGACAGTAGAGAAGCCAGGAGGAAGGTaGTGTTGGGCTGTCAGGGTG +
Preference number: 2 (lower is better)
Translates to: CSSEDNDLPTLHSSLTVEKPGGR*CWAVRV
Trigger: CACCCTGACAGCCCAACACCACCTTCCTCCTGGCTT...CTCTACTGTCAGCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGAGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTTCTTTCCATTCCACTaGGCTGCCCCCTGGAAGCCA +
Preference number: 2 (lower is better)
Translates to: REGLKPRSPDSHATTMTGFFPFH*AAPWKP
Trigger: TGGCTTCCAGGGGGCAGCCCAGTGGAATGGAAAGAA...GCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGACAGGTGACCTAATGTaGAGCCTTTTCAGGCTCCAC +
Preference number: 2 (lower is better)
Translates to: FSCEDLVWLMEAMAGQLQTGDLM*SLFRLH
Trigger: GTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGT...CTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AATGCCTTCTCCAGGAACACAGGGCACTCCGAGTGGACTCAGTGGTGGCTGGGGTCATCATTCCAGCCATaGCTGTGCACAGGTGACCTA +
Preference number: 2 (lower is better)
Translates to: NAFSRNTGHSEWTQWWLGSSFQP*LCTGDL
Trigger: TAGGTCACCTGTGCACAGCCATGGCTGGAATGATGA...CCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGTGTTCCTGGAGAAGGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp ACCCAGCACCTTCAATGTGACCAGTGCTCAACTCAGATGACAACAACCTGCAAGTCCGAGTGGACTCAGTaGTGGCTGGGGTGGGCCTGC +
Preference number: 2 (lower is better)
Translates to: TQHLQCDQCSTQMTTTCKSEWTQ*WLGWAC
Trigger: GCAGGCCCACCCCAGCCACCACTGAGTCCACTCGGA...CTTGCAGGTTGTTGTCATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGCGCCACAACCATGACTaGCTCAGCTCCCTTAATTCC +
Preference number: 2 (lower is better)
Translates to: AGQLQRIPFIIPAMAVHRRHNHD*LSSLNS
Trigger: GGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG...CCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp ACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGCTGAAAGCAGGGCAGTCACCTaGCCCATGGTCACCAAGGGC +
Preference number: 2 (lower is better)
Translates to: TGDLMWSLFRLHCRCDAESRAVT*PMVTKG
Trigger: GCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCT...TTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TCGGGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCTTGTGGTACAAGGAGAAGGGGATAATGTCCTaGAGCTCCCAGAAGATGCTG +
Preference number: 2 (lower is better)
Translates to: SGKASWQPSFSRSLWYKEKGIMS*SSQKML
Trigger: CAGCATCTTCTGGGAGCTCCAGGACATTATCCCCTT...CTCCTTGTACCACAAGCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCAAGGGGATAATGTCCTaGAGCTCCCAGAAGATGCTG +
Preference number: 2 (lower is better)
Translates to: GGDGRATPAYPLHHSSHGKGIMS*SSQKML
Trigger: CAGCATCTTCTGGGAGCTCCAGGACATTATCCCCTT...GCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTATGTCCTGCACCACGTaGTGCTGCTCGTACAGCTTG +
Preference number: 2 (lower is better)
Translates to: GLKPRSPDSHATTMTGSAMSCTT*CCSYSL
Trigger: CAAGCTGTACGAGCAGCACCACGTGGTGCAGGACAT...AGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACACGTGGATGTCGTTTTaGAAGGTGTGCAGGGCCTGC +
Preference number: 2 (lower is better)
Translates to: KTLLRHWQCAKPWVGWVNTWMSF*KVCRAC
Trigger: GCAGGCCCTGCACACCTTCCAAAACGACATCCACGT...GTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CAA 90 bp CAGCCCTCACAAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTaGGGTGGGATGGGTGAACACCCTTCAATGACTCTGAGAGGATTC +
Preference number: 2 (lower is better)
Translates to: QPSQDPAKTLAVCQA*GGMGEHPSMTLRGF
Trigger: GAATCCTCTCAGAGTCATTGAAGGGTGTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTTGTGAGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp ACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACACCATGGCTGTGCACAGGTaGCCTAATGTGGAGCCTTTT +
Preference number: 2 (lower is better)
Translates to: TLLRHWQCAKPWVGWVNTMAVHR*PNVEPF
Trigger: AAAAGGCTCCACATTAGGTCACCTGTGCACAGCCAT...GGTGTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp TTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCCAGCTTCCCTTACATaGCGCAATTCCTTCTCAGAT +
Preference number: 2 (lower is better)
Translates to: FSCEDLVWLMEAMAGQLQPASLT*RNSFSD
Trigger: ATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGG...CTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp ACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCAAGAAGAATCCATTCCACTGGGCTaGCCCCTGGAAGCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: TKWVLGKMRPAGLVSQEESIPLG*PLEARR
Trigger: CCTCCTGGCTTCCAGGGGGCAGCCCAGTGGAATGGA...TTCTTCTTGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp CTCGAAACGCAGCTTGACGTACTTCTTGGCAGGGATGATGCGGATCTCAGCGGCCCAGCTCGTAAGCAGTaGAGATGTGTTGGAACAGGC +
Preference number: 2 (lower is better)
Translates to: LETQLDVLLGRDDADLSGPARKQ*RCVGTG
Trigger: GCCTGTTCCAACACATCTGCACTGCTTACGAGCTGG...GCCGCTGAGATCCGCATCATCCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp CACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCACAGCTTGCTGGGCTCTaGCTCATCTGTCATGACCCC +
Preference number: 2 (lower is better)
Translates to: HCRCDAEREATRATTYPAQLAGL*LICHDP
Trigger: GGGGTCATGACAGATGAGGCAGAGCCCAGCAAGCTG...TGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp AGTAGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTCAGCTTGCTGGGCTCTaGCTCATCTGTCATGACCCC +
Preference number: 2 (lower is better)
Translates to: SREGLKPRSPDSHATTMTQLAGL*LICHDP
Trigger: GGGGTCATGACAGATGAGGCAGAGCCCAGCAAGCTG...AGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp CCTGGCAACCCAGCTTCTCTCGCAGCTTGTGGTACAAGGAGCCATCAAACATCTTGGGCCACTCACCCATaGACGCTGCGGACAAACTTC +
Preference number: 2 (lower is better)
Translates to: PGNPASLAACGTRSHQTSWATHP*TLRTNF
Trigger: GAAGTTTGTCCGCAGCGTGCATGGGTGAGTGGCCCA...AGATGTTTGATGGCTCCTTGTACCACAAGCTGCGAGAGAAGCTGGGTTGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR-3UTR CCA 90 bp ATCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCTCAGGGTGGGAGTTCTaGAGGGGTTTCTCTTTGAAA +
Preference number: 2 (lower is better)
Translates to: ILSYTSGKASWQPSFSRSSGWEF*RGFSLK
Trigger: TTTCAAAGAGAAACCCCTCCAGAACTCCCACCCTGA...GCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGAGGTGTACGACAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGGTTGGGCTGTCAGGGTaGGAGTTCTGGAGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: RHNHDWLSSLNSSFPYMTVGLSG*EFWRGF
Trigger: GAAACCCCTCCAGAACTCCCACCCTGACAGCCCAAC...CGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCAAAGCCAGGAGGAAGGTaGTGTTGGGCTGTCAGGGTG +
Preference number: 2 (lower is better)
Translates to: HCRCDAEREATRATTYPAKPGGR*CWAVRV
Trigger: CACCCTGACAGCCCAACACCACCTTCCTCCTGGCTT...TGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CTAGGAAAGCAGCCAAGCTTGAGTGAAGGGAAGATGCCTGACCACTCACACGTGCCTGAGATCCCAGGGTaGGGAAGAGCTGTCCTTCTC +
Preference number: 2 (lower is better)
Translates to: LGKQPSLSEGKMPDHSHVPEIPG*GRAVLL
Trigger: GAGAAGGACAGCTCTTCCCCACCCTGGGATCTCAGG...CACGTGTGAGTGGTCAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTGGATTTTGGTTATATGACTTGGCACAGCGCATCTaGGGCCTCCCCACTCCGTGG +
Preference number: 2 (lower is better)
Translates to: PSFPSPGLWIRSGFWLYDLAQRI*GLPTPW
Trigger: CCACGGAGTGGGGAGGCCCCAGATGCGCTGTGCCAA...GTCATATAACCAAAATCCAGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp ACAAGACAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGTTGGCACAGCGCATCTaGGGCCTCCCCACTCCGTGG +
Preference number: 2 (lower is better)
Translates to: TRQMLPCKPGMSLSGNEMLAQRI*GLPTPW
Trigger: CCACGGAGTGGGGAGGCCCCAGATGCGCTGTGCCAA...CATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTGTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CACCAAGACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCACTTTGGCCTCGGACCTaGCTTTGGCACAGCGCATCT +
Preference number: 2 (lower is better)
Translates to: HQDKVGFGKDEACRVGEPLWPRT*LWHSAS
Trigger: AGATGCGCTGTGCCAAAGCCAGGTCCGAGGCCAAAG...TGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTACAGGGCACTCCGAGTaGACTCAGTGGTGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: GCDSKIPSFPSPGLWIRSTGHSE*TQWWLG
Trigger: CCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGT...AGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AGGGTGGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCAGGTTCCCTTCCCTCTaGAACGGAAATGGAACTTTC +
Preference number: 2 (lower is better)
Translates to: RVVPLPSECLDAPSPHKTRFPSL*NGNGTF
Trigger: GAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCT...GGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CCCCAGCCCTCACAAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTAGGTTCCCTTCCCTCTaGAACGGAAATGGAACTTTC +
Preference number: 2 (lower is better)
Translates to: PQPSQDPAKTLAVCQALGRFPSL*NGNGTF
Trigger: GAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCT...ACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GGTGGGGAAGAGCTGTCCTTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGTCCCCAAGTGTCCACTaGATCATTTTTCCTCTGACT +
Preference number: 2 (lower is better)
Translates to: GGEELSFSCEDLVWLMEASPSVH*IIFPLT
Trigger: AGTCAGAGGAAAAATGATCCAGTGGACACTTGGGGA...CGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGCTCTTCCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CACCAAGACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCACAGTGTGCCAAGCCTTaGGTGGGATGGGTGAACACC +
Preference number: 2 (lower is better)
Translates to: HQDKVGFGKDEACRVGEPQCAKP*VGWVNT
Trigger: GGTGTTCACCCATCCCACCCAAGGCTTGGCACACTG...TGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGTGACCCCAAGCCCCGGGTTGTaGATAAGGTCTGGATTTTGG +
Preference number: 2 (lower is better)
Translates to: ATPAYPLHHSSHGCAQVTPSPGL*IRSGFW
Trigger: CCAAAATCCAGACCTTATCCACAACCCGGGGCTTGG...GGTCACCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CCTGGCAACCCAGCTTCTCTCGCAGCTTGTGGTACAAGGAGCCATCAAACATCTTGGTTCTCCTGCCGCTaGGACTCGTGGGTGAACTTG +
Preference number: 2 (lower is better)
Translates to: PGNPASLAACGTRSHQTSWFSCR*DSWVNL
Trigger: CAAGTTCACCCACGAGTCCCAGCGGCAGGAGAACCA...AGATGTTTGATGGCTCCTTGTACCACAAGCTGCGAGAGAAGCTGGGTTGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGAGCCCTTCCACGAAGTaGTTCTCCTGCCGCTGGGAC +
Preference number: 2 (lower is better)
Translates to: RDEWLEKSSRCSFLPAPRSPSTK*FSCRWD
Trigger: GTCCCAGCGGCAGGAGAACCACTTCGTGGAAGGGCT...CCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AAAGAGGTAGCGGAAGATGGGGTTGTTGCCAAAGGGGATAATGTCCTGGAGCTCAGCCCTTCCACGAAGTaGTTCTCCTGCCGCTGGGAC +
Preference number: 2 (lower is better)
Translates to: KEVAEDGVVAKGDNVLELSPSTK*FSCRWD
Trigger: GTCCCAGCGGCAGGAGAACCACTTCGTGGAAGGGCT...GAGCTCCAGGACATTATCCCCTTTGGCAACAACCCCATCTTCCGCTACCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp TGCAGCTCAGAGGACAATGACTTGCCCACGTTGCACAGCTCGCTGACAGTAGAGGAAAGCAGCCAAGCTTaGGTGAAGGGAAGATGCCTG +
Preference number: 2 (lower is better)
Translates to: CSSEDNDLPTLHSSLTVEESSQA*VKGRCL
Trigger: CAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTC...CTCTACTGTCAGCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp GCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGGACTTTCCACACAAATaGGGCTTTCCGTGGGTTTTG +
Preference number: 2 (lower is better)
Translates to: AGQLQRIPFIIPAMAVHRDFPHK*GFPWVL
Trigger: CAAAACCCACGGAAAGCCTCATTTGTGTGGAAAGTC...CCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp AGTAGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTAAGACACTGGCAGTGTaGCAAGCCTTGGGTGGGATG +
Preference number: 2 (lower is better)
Translates to: SREGLKPRSPDSHATTMTKTLAV*QALGGM
Trigger: CATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTT...AGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp GGAGTTCTGGAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAAGCTCCTGCACCACGTGGTaGTGCTCGTACAGCTTGCGC +
Preference number: 2 (lower is better)
Translates to: GVLEGFLFESVDLGKQPSSCTTW*CSYSLR
Trigger: GCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGA...GCTTGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCCAGAACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TCACACGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACAGTTGGGCTGTCAGGGTaGGAGTTCTGGAGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: SHATTMTGSAPLIPASLTVGLSG*EFWRGF
Trigger: GAAACCCCTCCAGAACTCCCACCCTGACAGCCCAAC...TGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTGGAGGAAGGTGGTGTTaGGCTGTCAGGGTGGGAGTT +
Preference number: 2 (lower is better)
Translates to: QMLPCKPGMSLSGNEMGAGGRWC*AVRVGV
Trigger: AACTCCCACCCTGACAGCCCAACACCACCTTCCTCC...AGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp ACCTGGCTTCAAAGTGTTTCACACGCGGCTCCCCATATGCTCCAATGTCGATGTGGAGGAAGGTGGTGTTaGGCTGTCAGGGTGGGAGTT +
Preference number: 2 (lower is better)
Translates to: TWLQSVSHAAPHMLQCRCGGRWC*AVRVGV
Trigger: AACTCCCACCCTGACAGCCCAACACCACCTTCCTCC...ACATCGACATTGGAGCATATGGGGAGCCGCGTGTGAAACACTTTGAAGCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTACAGGTGACCTAATGTaGAGCCTTTTCAGGCTCCAC +
Preference number: 2 (lower is better)
Translates to: GLKPRSPDSHATTMTGSATGDLM*SLFRLH
Trigger: GTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGT...AGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp ACCGGAGGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATACCTGAGATCCCAGGGTaGGGAAGAGCTGTCCTTCTC +
Preference number: 2 (lower is better)
Translates to: TGGCDSKIPSFPSPGLWIPEIPG*GRAVLL
Trigger: GAGAAGGACAGCTCTTCCCCACCCTGGGATCTCAGG...TATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCCTCCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGTGGGGAGTTTGGCACAGCGCATCTaGGGCCTCCCCACTCCGTGG +
Preference number: 2 (lower is better)
Translates to: SELRICKALKLTTAGVGSLAQRI*GLPTPW
Trigger: CCACGGAGTGGGGAGGCCCCAGATGCGCTGTGCCAA...ACTCCCCACCCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AGTTGCATAAACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGCCTCGGACCTGGCTTTaGCACAGCGCATCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: SCINNQALRYNKPGKDLGPRTWL*HSASGA
Trigger: GGCCCCAGATGCGCTGTGCCAAAGCCAGGTCCGAGG...CCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTATGCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGGGACGGCACCAAGGATaGCAGGGAGAACTTTGGCCT +
Preference number: 2 (lower is better)
Translates to: RDEWLEKSSRCSFLPAPRGRHQG*QGELWP
Trigger: AGGCCAAAGTTCTCCCTGCCATCCTTGGTGCCGTCC...CCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGAAATTAACTACAGCTaGGGTGGGGAGTGGTGGAAG +
Preference number: 2 (lower is better)
Translates to: EGLKPRSPDSHATTMTGSEINYS*GGEWWK
Trigger: CTTCCACCACTCCCCACCCCAGCTGTAGTTAATTTC...TGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TGCAGCTCAGAGGACAATGACTTGCCCACGTTGCACAGCTCGCTGACAGTAGAGAGAAACTCAGGGCTCTaGAGGGGAGAGCCTTACTCT +
Preference number: 2 (lower is better)
Translates to: CSSEDNDLPTLHSSLTVERNSGL*RGEPYS
Trigger: AGAGTAAGGCTCTCCCCTCCAGAGCCCTGAGTTTCT...CTCTACTGTCAGCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGAGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp ACAAGACAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGAGCAGGGCAGTCACCTaGCCCATGGTCACCAAGGGC +
Preference number: 2 (lower is better)
Translates to: TRQMLPCKPGMSLSGNEMSRAVT*PMVTKG
Trigger: GCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCT...CATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTGTCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AGTAGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTTCAGGAGGGAGATCTTaGGAGGCACCATCCAGCCAA +
Preference number: 2 (lower is better)
Translates to: SREGLKPRSPDSHATTMTSGGRS*EAPSSQ
Trigger: TTGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGA...AGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CCTGGCAACCCAGCTTCTCTCGCAGCTTGTGGTACAAGGAGCCATCAAACATCTTCAGGAGGGAGATCTTaGGAGGCACCATCCAGCCAA +
Preference number: 2 (lower is better)
Translates to: PGNPASLAACGTRSHQTSSGGRS*EAPSSQ
Trigger: TTGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGA...AGATGTTTGATGGCTCCTTGTACCACAAGCTGCGAGAGAAGCTGGGTTGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGGCTGCAGGCACTTCATaGGCACCAGCATGTCCTGCA +
Preference number: 2 (lower is better)
Translates to: RDEWLEKSSRCSFLPAPRAAGTS*APACPA
Trigger: TGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGC...CCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CAAGAGCTACCACTTACCCAGCACCTTCAATGTGACCAGTGCTCAACTCAGATGTGCACTAGGCCTGGCTaGCTGGGCAGGATGAACGGA +
Preference number: 2 (lower is better)
Translates to: QELPLTQHLQCDQCSTQMCTRPG*LGRMNG
Trigger: TCCGTTCATCCTGCCCAGCCAGCCAGGCCTAGTGCA...CATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGGTAAGTGGTAGCTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CTGATTCTAAAGAAAACCTTCATGCAGCCAAGAAACTCAGGGCTCTGGAGGGGACTGGCCTCATTCCCCTaGAGCAGTACCCTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: LILKKTFMQPRNSGLWRGLASFP*SSTLGL
Trigger: CAGCCCCAGGGTACTGCTCCAGGGGAATGAGGCCAG...TCCCCTCCAGAGCCCTGAGTTTCTTGGCTGCATGAAGGTTTTCTTTAGAATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR-3UTR TCA 90 bp CTAGGAAAGCAGCCAAGCTTGAGTGAAGGGAAGATGCCTGACCACTCACACGTGGAAAGCAGCCAAGCTTaGGTGAAGGGAAGATGCCTG +
Preference number: 2 (lower is better)
Translates to: LGKQPSLSEGKMPDHSHVESSQA*VKGRCL
Trigger: CAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTC...CACGTGTGAGTGGTCAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp TCCCCTGGATCCAATTCAGAGCGGAGACCACTCTCTCCACCTAGGTGTCCCAGGGGAGGGGTTTCTCTTTaGAAGTGTGGATCTAGGAAA +
Preference number: 2 (lower is better)
Translates to: SPGSNSERRPLSPPRCPRGGVSL*KCGSRK
Trigger: TTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCC...CCTGGGACACCTAGGTGGAGAGAGTGGTCTCCGCTCTGAATTGGATCCAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp AAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACGACTTTCCACACAAATaGGGCTTTCCGTGGGTTTTG +
Preference number: 2 (lower is better)
Translates to: KTLLRHWQCAKPWVGWVNDFPHK*GFPWVL
Trigger: CAAAACCCACGGAAAGCCTCATTTGTGTGGAAAGTC...GTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp AACTCCATCCAAAACCATCACATGGATGGCCAGGGACAGGACTGGCTACAAAAATCACAGCTTACCTCCTaGCCCAGAGGCTGCCACAGC +
Preference number: 2 (lower is better)
Translates to: NSIQNHHMDGQGQDWLQKSQLTS*PRGCHS
Trigger: GCTGTGGCAGCCTCTGGGTCAGGAGGTAAGCTGTGA...TTTTTGTAGCCAGTCCTGTCCCTGGCCATCCATGTGATGGTTTTGGATGGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR-3UTR GCA 90 bp CTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCTCCATTCCACTGGGCTaGCCCCTGGAAGCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: LSSLNSSFPYMTQFLLRFSIPLG*PLEARR
Trigger: CCTCCTGGCTTCCAGGGGGCAGCCCAGTGGAATGGA...GAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp CAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTGGGAAAGATGAGGCCTaGAGGGTTGGTGAGCCAAGA +
Preference number: 2 (lower is better)
Translates to: QMLPCKPGMSLSGNEMGAGKDEA*RVGEPR
Trigger: TCTTGGCTCACCAACCCTGCAGGCCTCATCTTTCCC...AGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp CTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTGACCTTCAGAGGACAATGACTTaGCCACGTTGCACAGCTCGC +
Preference number: 2 (lower is better)
Translates to: LPCKPGMSLSGNEMGADLQRTMT*PRCTAR
Trigger: GCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTG...AAGGTCAGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp GCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGACTTTCCACATGCACTaGCCACTGGCATCAAGTTTA +
Preference number: 2 (lower is better)
Translates to: AGQLQRIPFIIPAMAVHRTFHMH*PLASSL
Trigger: TAAACTTGATGCCAGTGGGCAGTGCATGTGGAAAGT...CCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp ACCAGCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGGTCTCATGTAGTAATTGCCAATaGTATTCAGCTTGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: TSMSCTTWCCSYSLRRVSCSNCQ*YSACWA
Trigger: AGCCCAGCAAGCTGAATAGCATTGGCAATTACTACA...TGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp ATACTATACTCTGGGCCACTCACCCATGCACGCTGCGGACAAACTTCTCCAGCTACGCGGCTCCCCATATaGTCCAATGTCGATGTAGAG +
Preference number: 2 (lower is better)
Translates to: ILYSGPLTHARCGQTSPATRLPI*SNVDVE
Trigger: CTCTACATCGACATTGGAGCATATGGGGAGCCGCGT...AGCTGGAGAAGTTTGTCCGCAGCGTGCATGGGTGAGTGGCCCAGAGTATAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR-3UTR GCA 90 bp ACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGCTGAAAGTGCCTGGCGGCCTTaGAGATCTTGTCGTACACCT +
Preference number: 2 (lower is better)
Translates to: TGDLMWSLFRLHCRCDAESAWRP*RSCRTP
Trigger: AGGTGTACGACAAGATCTGCAAGGCCGCCAGGCACT...TTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp ACCCAGCACCTTCAATGTGACCAGTGCTCAACTCAGATGACAACAACCTGCAAGTCCATCTGGAGCAGTTaGCCCTGGACCCAGCTAAGC +
Preference number: 2 (lower is better)
Translates to: TQHLQCDQCSTQMTTTCKSIWSS*PWTQLS
Trigger: GCTTAGCTGGGTCCAGGGGCAACTGCTCCAGATGGA...CTTGCAGGTTGTTGTCATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR-3UTR GCA 90 bp ACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCACACAGCATCTGGAAGCTaGAGAGGCAGAGAAGTGGGT +
Preference number: 2 (lower is better)
Translates to: TADVTLNGKQQELPLTQHTASGS*RGREVG
Trigger: ACCCACTTCTCTGCCTCTGCAGCTTCCAGATGCTGT...GTGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR-3UTR CCA 90 bp AACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCTTCTTTCCATTCCACTaGGCTGCCCCCTGGAAGCCA +
Preference number: 2 (lower is better)
Translates to: NQALRYNKPGKDLGRFPSFFPFH*AAPWKP
Trigger: TGGCTTCCAGGGGGCAGCCCAGTGGAATGGAAAGAA...GGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CGTCCCAGTGGCTTAGGGTTGGAGGCTTCACTGGCAAAACAATGGCACTGTTTATTCTTTCCATTCCACTaGGCTGCCCCCTGGAAGCCA +
Preference number: 2 (lower is better)
Translates to: RPSGLGLEASLAKQWHCLFFPFH*AAPWKP
Trigger: TGGCTTCCAGGGGGCAGCCCAGTGGAATGGAAAGAA...TAAACAGTGCCATTGTTTTGCCAGTGAAGCCTCCAACCCTAAGCCACTGGGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTTTCTTTCCATTCCACTaGGCTGCCCCCTGGAAGCCA +
Preference number: 2 (lower is better)
Translates to: QMLPCKPGMSLSGNEMGAFFPFH*AAPWKP
Trigger: TGGCTTCCAGGGGGCAGCCCAGTGGAATGGAAAGAA...AGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CGCAGCTTGTGGTACAAGGAGCCATCAAACATCTCCCAGAACTCCTCCCGGTTCACAGGTGACCTAATGTaGAGCCTTTTCAGGCTCCAC +
Preference number: 2 (lower is better)
Translates to: RSLWYKEPSNISQNSSRFTGDLM*SLFRLH
Trigger: GTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGT...GAACCGGGAGGAGTTCTGGGAGATGTTTGATGGCTCCTTGTACCACAAGCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GGAGTTCTGGAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAAGCCCTGAGATCCCAGGGTaGGGAAGAGCTGTCCTTCTC +
Preference number: 2 (lower is better)
Translates to: GVLEGFLFESVDLGKQPSPEIPG*GRAVLL
Trigger: GAGAAGGACAGCTCTTCCCCACCCTGGGATCTCAGG...GCTTGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCCAGAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp ACCCAGCACCTTCAATGTGACCAGTGCTCAACTCAGATGACAACAACCTGCAAGCCTGAGATCCCAGGGTaGGGAAGAGCTGTCCTTCTC +
Preference number: 2 (lower is better)
Translates to: TQHLQCDQCSTQMTTTCKPEIPG*GRAVLL
Trigger: GAGAAGGACAGCTCTTCCCCACCCTGGGATCTCAGG...CTTGCAGGTTGTTGTCATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GGAGTTCTGGAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAAGCTGGCAGGGAGAACTTTaGCCTCGGACCTGGCTTTGG +
Preference number: 2 (lower is better)
Translates to: GVLEGFLFESVDLGKQPSWQGEL*PRTWLW
Trigger: CCAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCA...GCTTGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCCAGAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GGTGGGGAAGAGCTGTCCTTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGAAAAAGAGGGATGAGTaGTTGGAGAAATCAAGTCGA +
Preference number: 2 (lower is better)
Translates to: GGEELSFSCEDLVWLMEAKKRDE*LEKSSR
Trigger: TCGACTTGATTTCTCCAACCACTCATCCCTCTTTTT...CGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGCTCTTCCCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCACGCCACAACCATGACTaGCTCAGCTCCCTTAATTCC +
Preference number: 2 (lower is better)
Translates to: HCRCDAEREATRATTYPARHNHD*LSSLNS
Trigger: GGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG...TGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CTGTGCACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACCGCCACAACCATGACTaGCTCAGCTCCCTTAATTCC +
Preference number: 2 (lower is better)
Translates to: LCTGDLMWSLFRLHCRCDRHNHD*LSSLNS
Trigger: GGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG...GTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGTGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCACCAAGCCCCGGGTTGTaGATAAGGTCTGGATTTTGG +
Preference number: 2 (lower is better)
Translates to: HCRCDAEREATRATTYPAPSPGL*IRSGFW
Trigger: CCAAAATCCAGACCTTATCCACAACCCGGGGCTTGG...TGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCAGTGCAGATGTGTTaGAACAGGCCGTACTTGTGG +
Preference number: 2 (lower is better)
Translates to: WSLFRLHCRCDAEREATRAVQMC*NRPYLW
Trigger: CCACAAGTACGGCCTGTTCCAACACATCTGCACTGC...TCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp ACCTGGCTTCAAAGTGTTTCACACGCGGCTCCCCATATGCTCCAATGTCGATGTATGTCCTGCACCACGTaGTGCTGCTCGTACAGCTTG +
Preference number: 2 (lower is better)
Translates to: TWLQSVSHAAPHMLQCRCMSCTT*CCSYSL
Trigger: CAAGCTGTACGAGCAGCACCACGTGGTGCAGGACAT...ACATCGACATTGGAGCATATGGGGAGCCGCGTGTGAAACACTTTGAAGCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp ACCCATCTCCACCCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTGGCCAGCTGTCCTTCTCCTGTaGGGACCTCGTCTGGCTGAT +
Preference number: 2 (lower is better)
Translates to: THLHPSLSVISKYSSFWPAVLLL*GPRLAD
Trigger: ATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGC...TGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGGGTGGAGATGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp AGTAGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTCCTGCAAGCCAGGTATaGGCCTTTCTGGAAATGAGA +
Preference number: 2 (lower is better)
Translates to: SREGLKPRSPDSHATTMTPASQV*AFLEMR
Trigger: TCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGG...AGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp TCACACGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACAGGCATAGAACAGGTCTaGGTTTTCGGACGGAGTGCA +
Preference number: 2 (lower is better)
Translates to: SHATTMTGSAPLIPASLTGIEQV*VFGRSA
Trigger: TGCACTCCGTCCGAAAACTCAGACCTGTTCTATGCC...TGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp CTAGGAAAGCAGCCAAGCTTGAGTGAAGGGAAGATGCCTGACCACTCACACGTGGATTCAACCCTGGAATaGCTTCTCCAGGAACACAGG +
Preference number: 2 (lower is better)
Translates to: LGKQPSLSEGKMPDHSHVDSTLE*LLQEHR
Trigger: CCTGTGTTCCTGGAGAAGGCATTCCAGGGTTGAATC...CACGTGTGAGTGGTCAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp ATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTGGATTTTGGTTATATGCTGCTCGTACAGCTTaGGCAGGGTCTCACCCTGGG +
Preference number: 2 (lower is better)
Translates to: IPSFPSPGLWIRSGFWLYAARTA*AGSHPG
Trigger: CCCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGC...ATATAACCAAAATCCAGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp CTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCAAGGTGTGCAGGGCCTaGTGCAGGCACTTCATGGGC +
Preference number: 2 (lower is better)
Translates to: LSSLNSSFPYMTQFLLRFKVCRA*CRHFMG
Trigger: GCCCATGAAGTGCCTGCAGCAGGCCCTGCACACCTT...GAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGAGGAAGGTGGTGTTaGGCTGTCAGGGTGGGAGTT +
Preference number: 2 (lower is better)
Translates to: SFPYMTQFLLRFGFSAEAGGRWC*AVRVGV
Trigger: AACTCCCACCCTGACAGCCCAACACCACCTTCCTCC...AGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GTAGTGTCTCAAGGGAATGTACTCCAGGCCCTCTCGGTTTGTCTTCAGATAGTTAAGCCAGGAGGAAGGTaGTGTTGGGCTGTCAGGGTG +
Preference number: 2 (lower is better)
Translates to: VVSQGNVLQALSVCLQIVKPGGR*CWAVRV
Trigger: CACCCTGACAGCCCAACACCACCTTCCTCCTGGCTT...AACTATCTGAAGACAAACCGAGAGGGCCTGGAGTACATTCCCTTGAGACACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp ACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCACTCATCATTCCAGCCATaGCTGTGCACAGGTGACCTA +
Preference number: 2 (lower is better)
Translates to: TADVTLNGKQQELPLTQHSSFQP*LCTGDL
Trigger: TAGGTCACCTGTGCACAGCCATGGCTGGAATGATGA...GTGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AGTAGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTTCATCATTCCAGCCATaGCTGTGCACAGGTGACCTA +
Preference number: 2 (lower is better)
Translates to: SREGLKPRSPDSHATTMTSSFQP*LCTGDL
Trigger: TAGGTCACCTGTGCACAGCCATGGCTGGAATGATGA...AGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGCCTCGGACCTGGCTTTaGCACAGCGCATCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: GTFSELRICKALKLTTAGPRTWL*HSASGA
Trigger: GGCCCCAGATGCGCTGTGCCAAAGCCAGGTCCGAGG...CCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TGCAGCTCAGAGGACAATGACTTGCCCACGTTGCACAGCTCGCTGACAGTAGAGGACAAGATTCAACCCTaGAATGCCTTCTCCAGGAAC +
Preference number: 2 (lower is better)
Translates to: CSSEDNDLPTLHSSLTVEDKIQP*NAFSRN
Trigger: GTTCCTGGAGAAGGCATTCCAGGGTTGAATCTTGTC...CTCTACTGTCAGCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGAGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCTGCCTTCTGAGTGCCTaGATGCCCCCAGCCCTCACA +
Preference number: 2 (lower is better)
Translates to: LSSLNSSFPYMTQFLLRFCLLSA*MPPALT
Trigger: TGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCA...GAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGTGGGGAGTTGCCTTCTGAGTGCCTaGATGCCCCCAGCCCTCACA +
Preference number: 2 (lower is better)
Translates to: SELRICKALKLTTAGVGSCLLSA*MPPALT
Trigger: TGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCA...ACTCCCCACCCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp ACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCACGCCAAATGGGTAGGGTaGTTCCTTTGCCTTCTGAGT +
Preference number: 2 (lower is better)
Translates to: TADVTLNGKQQELPLTQHAKWVG*FLCLLS
Trigger: ACTCAGAAGGCAAAGGAACCACCCTACCCATTTGGC...GTGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp ATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTGGATTTTGGTTATATGGCTGCTGGCATCTCTaGCCACCGTCCCAGTGGCTT +
Preference number: 2 (lower is better)
Translates to: IPSFPSPGLWIRSGFWLYGCWHL*PPSQWL
Trigger: AAGCCACTGGGACGGTGGCCAGAGATGCCAGCAGCC...ATATAACCAAAATCCAGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGTGGGGAGTCAGTCACCTGGCCCATaGTCACCAAGGGCTCCACAC +
Preference number: 2 (lower is better)
Translates to: SELRICKALKLTTAGVGSQSPGP*SPRAPH
Trigger: GTGTGGAGCCCTTGGTGACCATGGGCCAGGTGACTG...ACTCCCCACCCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGGCAGTGCAGATGTGTTaGAACAGGCCGTACTTGTGG +
Preference number: 2 (lower is better)
Translates to: RDEWLEKSSRCSFLPAPRAVQMC*NRPYLW
Trigger: CCACAAGTACGGCCTGTTCCAACACATCTGCACTGC...CCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATAGAGGTAGCGGAAGATaGGGTTGTTGCCAAAGGGGA +
Preference number: 2 (lower is better)
Translates to: YNKPGKDLGRFPSLWNGNRGSGR*GCCQRG
Trigger: TCCCCTTTGGCAACAACCCCATCTTCCGCTACCTCT...ATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TCTGATTCTAAAGAAAACCTTCATGCAGCCAAGAAACTCAGGGCTCTGGAGGGGGCTGCAGGCACTTCATaGGCACCAGCATGTCCTGCA +
Preference number: 2 (lower is better)
Translates to: SDSKENLHAAKKLRALEGAAGTS*APACPA
Trigger: TGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGC...CCCCTCCAGAGCCCTGAGTTTCTTGGCTGCATGAAGGTTTTCTTTAGAATCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AACTCCATCCAAAACCATCACATGGATGGCCAGGGACAGGACTGGCTACAAAAACTCCAGCTCAGTGCCTaGCGGCCTTGCAGATCTTGT +
Preference number: 2 (lower is better)
Translates to: NSIQNHHMDGQGQDWLQKLQLSA*RPCRSC
Trigger: ACAAGATCTGCAAGGCCGCCAGGCACTGAGCTGGAG...TTTTTGTAGCCAGTCCTGTCCCTGGCCATCCATGTGATGGTTTTGGATGGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp CTTCAGGAGGGAGATCTTGGGAGGCACCATCCAGCCAAAGAGGTAGCGGAAGATGGAGGGGTTTCTCTTTaGAAGTGTGGATCTAGGAAA +
Preference number: 2 (lower is better)
Translates to: LQEGDLGRHHPAKEVAEDGGVSL*KCGSRK
Trigger: TTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCC...ATCTTCCGCTACCTCTTTGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp CTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTGACCTTATGGCTGTGCACAGGTaGCCTAATGTGGAGCCTTTT +
Preference number: 2 (lower is better)
Translates to: LPCKPGMSLSGNEMGADLMAVHR*PNVEPF
Trigger: AAAAGGCTCCACATTAGGTCACCTGTGCACAGCCAT...AAGGTCAGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp ACCTGGCTTCAAAGTGTTTCACACGCGGCTCCCCATATGCTCCAATGTCGATGTATGGCTGTGCACAGGTaGCCTAATGTGGAGCCTTTT +
Preference number: 2 (lower is better)
Translates to: TWLQSVSHAAPHMLQCRCMAVHR*PNVEPF
Trigger: AAAAGGCTCCACATTAGGTCACCTGTGCACAGCCAT...ACATCGACATTGGAGCATATGGGGAGCCGCGTGTGAAACACTTTGAAGCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp ATCATCAGTTTTGCACTGAGCAAGGAAGCACATGGGTCTCCTATGAGAGCTAATGGCCTGCAGGGTTGGTaGGCCAAGAAGAATGAGCCC +
Preference number: 2 (lower is better)
Translates to: IISFALSKEAHGSPMRANGLQGW*AKKNEP
Trigger: GGGCTCATTCTTCTTGGCTCACCAACCCTGCAGGCC...ATTAGCTCTCATAGGAGACCCATGTGCTTCCTTGCTCAGTGCAAAACTGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp GGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTCTTGGGTGGGATGGGTaGACACCCTTCAATGACTCT +
Preference number: 2 (lower is better)
Translates to: GCDSKIPSFPSPGLWIRSLGWDG*TPFNDS
Trigger: AGAGTCATTGAAGGGTGTTCACCCATCCCACCCAAG...AGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp GAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAAGCTTGAGTGAAACTTCTTGGCAGGGATaGTGCGGATCTCAGCGGCCA +
Preference number: 2 (lower is better)
Translates to: EGFLFESVDLGKQPSLSETSWQG*CGSQRP
Trigger: TGGCCGCTGAGATCCGCATCATCCCTGCCAAGAAGT...TTCACTCAAGCTTGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp AACTCCATCCAAAACCATCACATGGATGGCCAGGGACAGGACTGGCTACAAAAAGCTCGAAACGCAGCTTaGCGTACTTCTTGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: NSIQNHHMDGQGQDWLQKARNAA*RTSWQG
Trigger: TCCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGC...TTTTTGTAGCCAGTCCTGTCCCTGGCCATCCATGTGATGGTTTTGGATGGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp ACCTGGCTTCAAAGTGTTTCACACGCGGCTCCCCATATGCTCCAATGTCGATGTGATTCAACCCTGGAATaGCTTCTCCAGGAACACAGG +
Preference number: 2 (lower is better)
Translates to: TWLQSVSHAAPHMLQCRCDSTLE*LLQEHR
Trigger: CCTGTGTTCCTGGAGAAGGCATTCCAGGGTTGAATC...ACATCGACATTGGAGCATATGGGGAGCCGCGTGTGAAACACTTTGAAGCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp ACCCATCTCCACCCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTGGCCAGGGAAAGATGAGGCCTaGAGGGTTGGTGAGCCAAGA +
Preference number: 2 (lower is better)
Translates to: THLHPSLSVISKYSSFWPGKDEA*RVGEPR
Trigger: TCTTGGCTCACCAACCCTGCAGGCCTCATCTTTCCC...TGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGGGTGGAGATGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp ACAAGACAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGGAAAGATGAGGCCTaGAGGGTTGGTGAGCCAAGA +
Preference number: 2 (lower is better)
Translates to: TRQMLPCKPGMSLSGNEMGKDEA*RVGEPR
Trigger: TCTTGGCTCACCAACCCTGCAGGCCTCATCTTTCCC...CATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTGTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp ACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCAAGAAGAAGTAGGGTGGTTCCTTTaGCTTCTGAGTGCCTGGATG +
Preference number: 2 (lower is better)
Translates to: TKWVLGKMRPAGLVSQEEVGWFL*LLSAWM
Trigger: CATCCAGGCACTCAGAAGGCAAAGGAACCACCCTAC...TTCTTCTTGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp ACACAATTGGATAAGCTTGACACATGCATGCAACCAAGGACTCCAATCACTGCAACGAAGTGGTTCTCCTaGCGCTGGGACTCGTGGGTG +
Preference number: 2 (lower is better)
Translates to: TQLDKLDTCMQPRTPITATKWFS*RWDSWV
Trigger: CACCCACGAGTCCCAGCGGCAGGAGAACCACTTCGT...TGCAGTGATTGGAGTCCTTGGTTGCATGCATGTGTCAAGCTTATCCAATTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR-3UTR GCA 90 bp ACCGGAGGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATACAATGCTATTCAGCTTaGTGGGCTCTGCCTCATCTG +
Preference number: 2 (lower is better)
Translates to: TGGCDSKIPSFPSPGLWIQCYSA*WALPHL
Trigger: CAGATGAGGCAGAGCCCAGCAAGCTGAATAGCATTG...TATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCCTCCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp ACAAGACAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGAGTGCCTGGCGGCCTTaGAGATCTTGTCGTACACCT +
Preference number: 2 (lower is better)
Translates to: TRQMLPCKPGMSLSGNEMSAWRP*RSCRTP
Trigger: AGGTGTACGACAAGATCTGCAAGGCCGCCAGGCACT...CATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTGTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp CACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCACCCAACTGCTCATTCTaGAGCCCAGAAAAGGCTTTT +
Preference number: 2 (lower is better)
Translates to: HCRCDAEREATRATTYPAPNCSF*SPEKAF
Trigger: AAAAGCCTTTTCTGGGCTGCAGAATGAGCAGTTGGG...TGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR-3UTR CCA 90 bp AGTAGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTTCAGGGTGGGAGTTCTaGAGGGGTTTCTCTTTGAAA +
Preference number: 2 (lower is better)
Translates to: SREGLKPRSPDSHATTMTSGWEF*RGFSLK
Trigger: TTTCAAAGAGAAACCCCTCCAGAACTCCCACCCTGA...AGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTACAGGTGACCTAATGTaGAGCCTTTTCAGGCTCCAC +
Preference number: 2 (lower is better)
Translates to: QMLPCKPGMSLSGNEMGATGDLM*SLFRLH
Trigger: GTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGT...AGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAAGCTTGAGTGAACTTTGGCCTCGGACCTaGCTTTGGCACAGCGCATCT +
Preference number: 2 (lower is better)
Translates to: EGFLFESVDLGKQPSLSELWPRT*LWHSAS
Trigger: AGATGCGCTGTGCCAAAGCCAGGTCCGAGGCCAAAG...TTCACTCAAGCTTGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAAGCTTGAGTGAAGGACGGCACCAAGGATaGCAGGGAGAACTTTGGCCT +
Preference number: 2 (lower is better)
Translates to: EGFLFESVDLGKQPSLSEGRHQG*QGELWP
Trigger: AGGCCAAAGTTCTCCCTGCCATCCTTGGTGCCGTCC...TTCACTCAAGCTTGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CTGTGCACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGACAAGATTCAACCCTaGAATGCCTTCTCCAGGAAC +
Preference number: 2 (lower is better)
Translates to: LCTGDLMWSLFRLHCRCDDKIQP*NAFSRN
Trigger: GTTCCTGGAGAAGGCATTCCAGGGTTGAATCTTGTC...GTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGTGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCACCCACCAAGACAAAGTaGGTTTTGGGAAAGATGAGG +
Preference number: 2 (lower is better)
Translates to: HCRCDAEREATRATTYPAPTKTK*VLGKMR
Trigger: CCTCATCTTTCCCAAAACCCACTTTGTCTTGGTGGG...TGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGTGGGGAGTGGAGAGTCCAGCCAATaGAGGTCAGCAGGGCAGTCA +
Preference number: 2 (lower is better)
Translates to: SELRICKALKLTTAGVGSGESSQ*RSAGQS
Trigger: TGACTGCCCTGCTGACCTCCATTGGCTGGACTCTCC...ACTCCCCACCCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AAAGAGGTAGCGGAAGATGGGGTTGTTGCCAAAGGGGATAATGTCCTGGAGCTCAACAGGCCGTACTTGTaGGATGATGACTCGATGCCT +
Preference number: 2 (lower is better)
Translates to: KEVAEDGVVAKGDNVLELNRPYL*DDDSMP
Trigger: AGGCATCGAGTCATCATCCCACAAGTACGGCCTGTT...GAGCTCCAGGACATTATCCCCTTTGGCAACAACCCCATCTTCCGCTACCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CAAGAGCTACCACTTACCCAGCACCTTCAATGTGACCAGTGCTCAACTCAGATGAGAGGTAGCGGAAGATaGGGTTGTTGCCAAAGGGGA +
Preference number: 2 (lower is better)
Translates to: QELPLTQHLQCDQCSTQMRGSGR*GCCQRG
Trigger: TCCCCTTTGGCAACAACCCCATCTTCCGCTACCTCT...CATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGGTAAGTGGTAGCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AGTAGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTTTCTCTCGCAGCTTGTaGTACAAGGAGCCATCAAAC +
Preference number: 2 (lower is better)
Translates to: SREGLKPRSPDSHATTMTFSRSL*YKEPSN
Trigger: GTTTGATGGCTCCTTGTACCACAAGCTGCGAGAGAA...AGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp TACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGCAGTTCGGACTCAGGCTTGTCTaGCTCCAAATCCCACATTCT +
Preference number: 2 (lower is better)
Translates to: YMTQFLLRFGFSAEAGQFGLRLV*LQIPHS
Trigger: AGAATGTGGGATTTGGAGTCAGACAAGCCTGAGTCC...GAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp ACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCAAGAAGAACCAGCACCTTCAATGTaGCCAGTGCTCAACTCAGAT +
Preference number: 2 (lower is better)
Translates to: TKWVLGKMRPAGLVSQEEPAPSM*PVLNSD
Trigger: ATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGG...TTCTTCTTGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp TGCAGCTCAGAGGACAATGACTTGCCCACGTTGCACAGCTCGCTGACAGTAGAGAGGAAGGATCTTGAATaGCAGATAATCCCCAAGTGT +
Preference number: 2 (lower is better)
Translates to: CSSEDNDLPTLHSSLTVERKDLE*QIIPKC
Trigger: ACACTTGGGGATTATCTGTCATTCAAGATCCTTCCT...CTCTACTGTCAGCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGAGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp AGTAGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTTGGATTTTGGTTATATaGCTAAGGGCGACAGAGGCT +
Preference number: 2 (lower is better)
Translates to: SREGLKPRSPDSHATTMTWILVI*LRATEA
Trigger: AGCCTCTGTCGCCCTTAGTCATATAACCAAAATCCA...AGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp CTGATTCTAAAGAAAACCTTCATGCAGCCAAGAAACTCAGGGCTCTGGAGGGGAGTGGCTGTAAGAGCCTaGCAGGGAAGATTCATGCCT +
Preference number: 2 (lower is better)
Translates to: LILKKTFMQPRNSGLWRGVAVRA*QGRFMP
Trigger: AGGCATGAATCTTCCCTGTCAGGCTCTTACAGCCAC...TCCCCTCCAGAGCCCTGAGTTTCTTGGCTGCATGAAGGTTTTCTTTAGAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp AGTTGCATAAACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGCAGAGGACAATGACTTaGCCACGTTGCACAGCTCGC +
Preference number: 2 (lower is better)
Translates to: SCINNQALRYNKPGKDLGQRTMT*PRCTAR
Trigger: GCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTG...CCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTATGCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp TCTGATTCTAAAGAAAACCTTCATGCAGCCAAGAAACTCAGGGCTCTGGAGGGGGTAGGGTGGTTCCTTTaGCTTCTGAGTGCCTGGATG +
Preference number: 2 (lower is better)
Translates to: SDSKENLHAAKKLRALEGVGWFL*LLSAWM
Trigger: CATCCAGGCACTCAGAAGGCAAAGGAACCACCCTAC...CCCCTCCAGAGCCCTGAGTTTCTTGGCTGCATGAAGGTTTTCTTTAGAATCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp AACTCCATCCAAAACCATCACATGGATGGCCAGGGACAGGACTGGCTACAAAAACCAGCTCGTAAGCAGTaGAGATGTGTTGGAACAGGC +
Preference number: 2 (lower is better)
Translates to: NSIQNHHMDGQGQDWLQKPARKQ*RCVGTG
Trigger: GCCTGTTCCAACACATCTGCACTGCTTACGAGCTGG...TTTTTGTAGCCAGTCCTGTCCCTGGCCATCCATGTGATGGTTTTGGATGGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp GGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGACGAAGTGGTTCTCCTaGCGCTGGGACTCGTGGGTG +
Preference number: 2 (lower is better)
Translates to: GTFSELRICKALKLTTAGTKWFS*RWDSWV
Trigger: CACCCACGAGTCCCAGCGGCAGGAGAACCACTTCGT...CCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp ACCCAGCACCTTCAATGTGACCAGTGCTCAACTCAGATGACAACAACCTGCAAGCAATGCTATTCAGCTTaGTGGGCTCTGCCTCATCTG +
Preference number: 2 (lower is better)
Translates to: TQHLQCDQCSTQMTTTCKQCYSA*WALPHL
Trigger: CAGATGAGGCAGAGCCCAGCAAGCTGAATAGCATTG...CTTGCAGGTTGTTGTCATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp GGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGTCCTGCACCACGTGGTaGTGCTCGTACAGCTTGCGC +
Preference number: 2 (lower is better)
Translates to: GTFSELRICKALKLTTAGSCTTW*CSYSLR
Trigger: GCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGA...CCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CACCCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTGGCCAAAGAAACTGGTTGGGCTGTCAGGGTaGGAGTTCTGGAGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: HPSLSVISKYSSFWPKKLVGLSG*EFWRGF
Trigger: GAAACCCCTCCAGAACTCCCACCCTGACAGCCCAAC...CAGTTTCTTTGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CACCAAGACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCATCCCCAAGTGTCCACTaGATCATTTTTCCTCTGACT +
Preference number: 2 (lower is better)
Translates to: HQDKVGFGKDEACRVGEPSPSVH*IIFPLT
Trigger: AGTCAGAGGAAAAATGATCCAGTGGACACTTGGGGA...TGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CAAGAGCTACCACTTACCCAGCACCTTCAATGTGACCAGTGCTCAACTCAGATGAACAGGCCGTACTTGTaGGATGATGACTCGATGCCT +
Preference number: 2 (lower is better)
Translates to: QELPLTQHLQCDQCSTQMNRPYL*DDDSMP
Trigger: AGGCATCGAGTCATCATCCCACAAGTACGGCCTGTT...CATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGGTAAGTGGTAGCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp TCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGGAAAGCAGCCAAGCTTaGGTGAAGGGAAGATGCCTG +
Preference number: 2 (lower is better)
Translates to: SLWNGNGTFSELRICKALESSQA*VKGRCL
Trigger: CAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTC...CAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp ACCGGAGGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAGGAGGGGTTTCTCTTTaGAAGTGTGGATCTAGGAAA +
Preference number: 2 (lower is better)
Translates to: TGGCDSKIPSFPSPGLWIGGVSL*KCGSRK
Trigger: TTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCC...TATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCCTCCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp ACCCATCTCCACCCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTGGCCACCAGCACCTTCAATGTaGCCAGTGCTCAACTCAGAT +
Preference number: 2 (lower is better)
Translates to: THLHPSLSVISKYSSFWPPAPSM*PVLNSD
Trigger: ATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGG...TGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGGGTGGAGATGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp AGTAGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTAGGAAGGATCTTGAATaGCAGATAATCCCCAAGTGT +
Preference number: 2 (lower is better)
Translates to: SREGLKPRSPDSHATTMTRKDLE*QIIPKC
Trigger: ACACTTGGGGATTATCTGTCATTCAAGATCCTTCCT...AGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp ATCATCAGTTTTGCACTGAGCAAGGAAGCACATGGGTCTCCTATGAGAGCTAATGCTCGAAACGCAGCTTaGCGTACTTCTTGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: IISFALSKEAHGSPMRANARNAA*RTSWQG
Trigger: TCCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGC...ATTAGCTCTCATAGGAGACCCATGTGCTTCCTTGCTCAGTGCAAAACTGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp AACTCCATCCAAAACCATCACATGGATGGCCAGGGACAGGACTGGCTACAAAAAGTCGATGTAGAGCTCTaGCTCATTTCCTTTGGGGTG +
Preference number: 2 (lower is better)
Translates to: NSIQNHHMDGQGQDWLQKVDVEL*LISFGV
Trigger: CACCCCAAAGGAAATGAGGCAGAGCTCTACATCGAC...TTTTTGTAGCCAGTCCTGTCCCTGGCCATCCATGTGATGGTTTTGGATGGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CTGATTCTAAAGAAAACCTTCATGCAGCCAAGAAACTCAGGGCTCTGGAGGGGAACAGGTGACCTAATGTaGAGCCTTTTCAGGCTCCAC +
Preference number: 2 (lower is better)
Translates to: LILKKTFMQPRNSGLWRGTGDLM*SLFRLH
Trigger: GTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGT...TCCCCTCCAGAGCCCTGAGTTTCTTGGCTGCATGAAGGTTTTCTTTAGAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGAGTGGACTCAGTGGTaGCTGGGGTGGGCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: GNGTFSELRICKALKLTTEWTQW*LGWACR
Trigger: CCTGCAGGCCCACCCCAGCCACCACTGAGTCCACTC...TGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp ACAAGACAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGAAATTAACTACAGCTaGGGTGGGGAGTGGTGGAAG +
Preference number: 2 (lower is better)
Translates to: TRQMLPCKPGMSLSGNEMEINYS*GGEWWK
Trigger: CTTCCACCACTCCCCACCCCAGCTGTAGTTAATTTC...CATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTGTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGCGCCACAACCATGACTaGCTCAGCTCCCTTAATTCC +
Preference number: 2 (lower is better)
Translates to: SLWNGNGTFSELRICKALRHNHD*LSSLNS
Trigger: GGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG...CAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTGACCTTTCCCCAAGTGTCCACTaGATCATTTTTCCTCTGACT +
Preference number: 2 (lower is better)
Translates to: LPCKPGMSLSGNEMGADLSPSVH*IIFPLT
Trigger: AGTCAGAGGAAAAATGATCCAGTGGACACTTGGGGA...AAGGTCAGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTGGATTTTGGTTATATGACAAGGGGATAATGTCCTaGAGCTCCCAGAAGATGCTG +
Preference number: 2 (lower is better)
Translates to: PSFPSPGLWIRSGFWLYDKGIMS*SSQKML
Trigger: CAGCATCTTCTGGGAGCTCCAGGACATTATCCCCTT...GTCATATAACCAAAATCCAGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp ACAAGACAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGCCTCATGCAGGACCTaGCTTCAAAGTGTTTCACAC +
Preference number: 2 (lower is better)
Translates to: TRQMLPCKPGMSLSGNEMASCRT*LQSVSH
Trigger: GTGTGAAACACTTTGAAGCCAGGTCCTGCATGAGGC...CATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTGTCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp TCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGTGGGGAGTGGACTCAGGCTTGTCTaGCTCCAAATCCCACATTCT +
Preference number: 2 (lower is better)
Translates to: SELRICKALKLTTAGVGSGLRLV*LQIPHS
Trigger: AGAATGTGGGATTTGGAGTCAGACAAGCCTGAGTCC...ACTCCCCACCCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp CTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGACTCAGGCTTGTCTaGCTCCAAATCCCACATTCT +
Preference number: 2 (lower is better)
Translates to: LSSLNSSFPYMTQFLLRFGLRLV*LQIPHS
Trigger: AGAATGTGGGATTTGGAGTCAGACAAGCCTGAGTCC...GAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp CTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCATTCGGGTTTTCAGCTaGGGCTGGGCAGTTCTTAAG +
Preference number: 2 (lower is better)
Translates to: LSSLNSSFPYMTQFLLRFIRVFS*GWAVLK
Trigger: CTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAAT...GAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp TCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGATTCGGGTTTTCAGCTaGGGCTGGGCAGTTCTTAAG +
Preference number: 2 (lower is better)
Translates to: SLWNGNGTFSELRICKALIRVFS*GWAVLK
Trigger: CTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAAT...CAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp AGTTGCATAAACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGATTCGGGTTTTCAGCTaGGGCTGGGCAGTTCTTAAG +
Preference number: 2 (lower is better)
Translates to: SCINNQALRYNKPGKDLGIRVFS*GWAVLK
Trigger: CTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAAT...CCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTATGCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp ATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTGGATTTTGGTTATATACAGTAGAGAGGGGCTaGAACCTAGGTCTCCTGACT +
Preference number: 2 (lower is better)
Translates to: IPSFPSPGLWIRSGFWLYTVERG*NLGLLT
Trigger: AGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACTGT...ATATAACCAAAATCCAGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp AGTTGCATAAACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGCCTGCAAGCCAGGTATaGGCCTTTCTGGAAATGAGA +
Preference number: 2 (lower is better)
Translates to: SCINNQALRYNKPGKDLGPASQV*AFLEMR
Trigger: TCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGG...CCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTATGCAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp CACCCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTGGCCAAAGAAACTGCTTTTCAGGCTCCACTaGAGATGTGACGCTGAACGG +
Preference number: 2 (lower is better)
Translates to: HPSLSVISKYSSFWPKKLLFRLH*RCDAER
Trigger: CCGTTCAGCGTCACATCTGCAGTGGAGCCTGAAAAG...CAGTTTCTTTGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp GGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGCTCGTACAGCTTaGGCAGGGTCTCACCCTGGG +
Preference number: 2 (lower is better)
Translates to: GNGTFSELRICKALKLTTAARTA*AGSHPG
Trigger: CCCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGC...TGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTGGATTTTGGTTATATGACTCAGGGTGGGAGTTCTaGAGGGGTTTCTCTTTGAAA +
Preference number: 2 (lower is better)
Translates to: PSFPSPGLWIRSGFWLYDSGWEF*RGFSLK
Trigger: TTTCAAAGAGAAACCCCTCCAGAACTCCCACCCTGA...GTCATATAACCAAAATCCAGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAACAGGGCACTCCGAGTaGACTCAGTGGTGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: GNGTFSELRICKALKLTTTGHSE*TQWWLG
Trigger: CCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGT...TGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TTGCAACCACAGTGTCTAAGACAATCAGAAGGGTTCCAGGGAGGTCTTGTCTGTCCCACCAAGACAAAGTaGGTTTTGGGAAAGATGAGG +
Preference number: 2 (lower is better)
Translates to: LQPQCLRQSEGFQGGLVCPTKTK*VLGKMR
Trigger: CCTCATCTTTCCCAAAACCCACTTTGTCTTGGTGGG...ACAGACAAGACCTCCCTGGAACCCTTCTGATTGTCTTAGACACTGTGGTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AGTTGCATAAACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGGAAATTAACTACAGCTaGGGTGGGGAGTGGTGGAAG +
Preference number: 2 (lower is better)
Translates to: SCINNQALRYNKPGKDLGEINYS*GGEWWK
Trigger: CTTCCACCACTCCCCACCCCAGCTGTAGTTAATTTC...CCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTATGCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGAAATTAACTACAGCTaGGGTGGGGAGTGGTGGAAG +
Preference number: 2 (lower is better)
Translates to: LSSLNSSFPYMTQFLLRFEINYS*GGEWWK
Trigger: CTTCCACCACTCCCCACCCCAGCTGTAGTTAATTTC...GAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTAGGTTCCCTTCCCTCTaGAACGGAAATGGAACTTTC +
Preference number: 2 (lower is better)
Translates to: SFPYMTQFLLRFGFSAEARFPSL*NGNGTF
Trigger: GAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCT...AGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp TTGCAACCACAGTGTCTAAGACAATCAGAAGGGTTCCAGGGAGGTCTTGTCTGTCAGGCAAGATTTTACTaGAGCAACATAACCGGAGGG +
Preference number: 2 (lower is better)
Translates to: LQPQCLRQSEGFQGGLVCQARFY*SNITGG
Trigger: CCCTCCGGTTATGTTGCTCCAGTAAAATCTTGCCTG...ACAGACAAGACCTCCCTGGAACCCTTCTGATTGTCTTAGACACTGTGGTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CACCCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTGGCCAAAGAAACTGAAACCATCACATGGATaGCCAGGGACAGGACTGGCT +
Preference number: 2 (lower is better)
Translates to: HPSLSVISKYSSFWPKKLKPSHG*PGTGLA
Trigger: AGCCAGTCCTGTCCCTGGCCATCCATGTGATGGTTT...CAGTTTCTTTGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp ATCATCAGTTTTGCACTGAGCAAGGAAGCACATGGGTCTCCTATGAGAGCTAATGCAGTGCAGATGTGTTaGAACAGGCCGTACTTGTGG +
Preference number: 2 (lower is better)
Translates to: IISFALSKEAHGSPMRANAVQMC*NRPYLW
Trigger: CCACAAGTACGGCCTGTTCCAACACATCTGCACTGC...ATTAGCTCTCATAGGAGACCCATGTGCTTCCTTGCTCAGTGCAAAACTGATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp CTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAAGAAAGCAGCCAAGCTTaGGTGAAGGGAAGATGCCTG +
Preference number: 2 (lower is better)
Translates to: LWNGNGTFSELRICKALKESSQA*VKGRCL
Trigger: CAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTC...TTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp TTGCAACCACAGTGTCTAAGACAATCAGAAGGGTTCCAGGGAGGTCTTGTCTGTGGAGGGGTTTCTCTTTaGAAGTGTGGATCTAGGAAA +
Preference number: 2 (lower is better)
Translates to: LQPQCLRQSEGFQGGLVCGGVSL*KCGSRK
Trigger: TTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCC...ACAGACAAGACCTCCCTGGAACCCTTCTGATTGTCTTAGACACTGTGGTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp ATCATCAGTTTTGCACTGAGCAAGGAAGCACATGGGTCTCCTATGAGAGCTAATATGGCTGTGCACAGGTaGCCTAATGTGGAGCCTTTT +
Preference number: 2 (lower is better)
Translates to: IISFALSKEAHGSPMRANMAVHR*PNVEPF
Trigger: AAAAGGCTCCACATTAGGTCACCTGTGCACAGCCAT...ATTAGCTCTCATAGGAGACCCATGTGCTTCCTTGCTCAGTGCAAAACTGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp GGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGACGCGGCTCCCCATATaGTCCAATGTCGATGTAGAG +
Preference number: 2 (lower is better)
Translates to: GTFSELRICKALKLTTAGTRLPI*SNVDVE
Trigger: CTCTACATCGACATTGGAGCATATGGGGAGCCGCGT...CCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp AGTTGCATAAACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGTCAGGGTGGGAGTTCTaGAGGGGTTTCTCTTTGAAA +
Preference number: 2 (lower is better)
Translates to: SCINNQALRYNKPGKDLGSGWEF*RGFSLK
Trigger: TTTCAAAGAGAAACCCCTCCAGAACTCCCACCCTGA...CCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTATGCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCTCAGGGTGGGAGTTCTaGAGGGGTTTCTCTTTGAAA +
Preference number: 2 (lower is better)
Translates to: LSSLNSSFPYMTQFLLRFSGWEF*RGFSLK
Trigger: TTTCAAAGAGAAACCCCTCCAGAACTCCCACCCTGA...GAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp CACCCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTGGCCAAAGAAACTGCAACATACTATACTCTaGGCCACTCACCCATGCACG +
Preference number: 2 (lower is better)
Translates to: HPSLSVISKYSSFWPKKLQHTIL*ATHPCT
Trigger: CGTGCATGGGTGAGTGGCCCAGAGTATAGTATGTTG...CAGTTTCTTTGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR-3UTR TCA 90 bp GGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGCCAGCACCTTCAATGTaGCCAGTGCTCAACTCAGAT +
Preference number: 2 (lower is better)
Translates to: GTFSELRICKALKLTTAGPAPSM*PVLNSD
Trigger: ATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGG...CCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGGAGGAAGGTGGTGTTaGGCTGTCAGGGTGGGAGTT +
Preference number: 2 (lower is better)
Translates to: GNGTFSELRICKALKLTTGGRWC*AVRVGV
Trigger: AACTCCCACCCTGACAGCCCAACACCACCTTCCTCC...TGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp ATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTGGATTTTGGTTATATGACAAGATTCAACCCTaGAATGCCTTCTCCAGGAAC +
Preference number: 2 (lower is better)
Translates to: IPSFPSPGLWIRSGFWLYDKIQP*NAFSRN
Trigger: GTTCCTGGAGAAGGCATTCCAGGGTTGAATCTTGTC...ATATAACCAAAATCCAGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp ATCATCAGTTTTGCACTGAGCAAGGAAGCACATGGGTCTCCTATGAGAGCTAATCCCACCAAGACAAAGTaGGTTTTGGGAAAGATGAGG +
Preference number: 2 (lower is better)
Translates to: IISFALSKEAHGSPMRANPTKTK*VLGKMR
Trigger: CCTCATCTTTCCCAAAACCCACTTTGTCTTGGTGGG...ATTAGCTCTCATAGGAGACCCATGTGCTTCCTTGCTCAGTGCAAAACTGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CCA 90 bp GGAGTTCTGGAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAAGCAAAAAGAGGGATGAGTaGTTGGAGAAATCAAGTCGA +
Preference number: 2 (lower is better)
Translates to: GVLEGFLFESVDLGKQPSKKRDE*LEKSSR
Trigger: TCGACTTGATTTCTCCAACCACTCATCCCTCTTTTT...GCTTGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCCAGAACTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR TCA 90 bp TCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAGGAAGGATCTTGAATaGCAGATAATCCCCAAGTGT +
Preference number: 2 (lower is better)
Translates to: SLWNGNGTFSELRICKALRKDLE*QIIPKC
Trigger: ACACTTGGGGATTATCTGTCATTCAAGATCCTTCCT...CAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp TCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGTGTAGTAATTGCCAATaGTATTCAGCTTGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: SLWNGNGTFSELRICKALCSNCQ*YSACWA
Trigger: AGCCCAGCAAGCTGAATAGCATTGGCAATTACTACA...CAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp GGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACACTCACCCATGCACGCTaGGGACAAACTTCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: GNGTFSELRICKALKLTTLTHAR*GQTSPA
Trigger: AGCTGGAGAAGTTTGTCCGCAGCGTGCATGGGTGAG...TGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR-3UTR TCA 90 bp CTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAAGGAGGGGTTTCTCTTTaGAAGTGTGGATCTAGGAAA +
Preference number: 2 (lower is better)
Translates to: LWNGNGTFSELRICKALKGGVSL*KCGSRK
Trigger: TTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCC...TTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR GCA 90 bp GGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACACAATGCTATTCAGCTTaGTGGGCTCTGCCTCATCTG +
Preference number: 2 (lower is better)
Translates to: GNGTFSELRICKALKLTTQCYSA*WALPHL
Trigger: CAGATGAGGCAGAGCCCAGCAAGCTGAATAGCATTG...TGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 72 bp GGATGGCAGGGAGAACTTTGGCCTCGGACCTGGCTTTaGCACAGCGCATCTGGGGCCTCCCCACTCCGTGGC +
Preference number: 3 (lower is better)
Translates to: GWQGELWPRTWL*HSASGASPLRG
Trigger: GCCACGGAGTGGGGAGGCCCCAGATGCGCTGTGCCAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 72 bp TGGAATGCCTTCTCCAGGAACACAGGGCACTCCGAGTaGACTCAGTGGTGGCTGGGGTGGGCCTGCAGGCCC +
Preference number: 3 (lower is better)
Translates to: WNAFSRNTGHSE*TQWWLGWACRP
Trigger: GGGCCTGCAGGCCCACCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGTGTTCCTGGAGAAGGCATTCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp GCCTGCTGCAGGCACTTCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTGCTGCTGCTCGTACAGCTaGCGCAGGGTCTCACCCTGG +
Preference number: 3 (lower is better)
Translates to: ACCRHFMGTSMSCTTWCCCCSYS*RRVSPW
Trigger: CCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCA...GCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 72 bp GCCTGCTGCAGGCACTTCATGGGCACCAGCATGTCCTaGACCACGTGGTGCTGCTCGTACAGCTTGCGCAGG +
Preference number: 3 (lower is better)
Translates to: ACCRHFMGTSMS*TTWCCSYSLRR
Trigger: CCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 72 bp TTCTCCAGGAACACAGGGCACTCCGAGTGGACTCAGTaGTGGCTGGGGTGGGCCTGCAGGCCCAGGCATGAA +
Preference number: 3 (lower is better)
Translates to: FSRNTGHSEWTQ*WLGWACRPRHE
Trigger: TTCATGCCTGGGCCTGCAGGCCCACCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGTGTTCCTGGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 72 bp CCCCCTCCAGAGGCCAAATGGGTAGGGTGGTTCCTTTaGCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACA +
Preference number: 3 (lower is better)
Translates to: PPPEAKWVGWFL*LLSAWMPPALT
Trigger: TGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACCCATTTGGCCTCTGGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 72 bp TTCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTaGTCGTACAGCTTGCGCAGGGTCTCACCCTGGGTC +
Preference number: 3 (lower is better)
Translates to: FMGTSMSCTTWC*SYSLRRVSPWV
Trigger: GACCCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 72 bp CACTTCATGGGCACCAGCATGTCCTGCACCACGTGGTaGTGCTCGTACAGCTTGCGCAGGGTCTCACCCTGG +
Preference number: 3 (lower is better)
Translates to: HFMGTSMSCTTW*CSYSLRRVSPW
Trigger: CCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 72 bp ACACGTGTCTGTCTCTCCAGGCGGGCTCCAGCTCAGTaGCTGGCGGCCTTGCAGATCTTGTCGTACACCTCG +
Preference number: 3 (lower is better)
Translates to: TRVCLSRRAPAQ*LAALQILSYTS
Trigger: CGAGGTGTACGACAAGATCTGCAAGGCCGCCAGGCACTGAGCTGGAGCCCGCCTGGAGAGACAGACACGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 72 bp GGGGAAGAGCTGTCCTTCTCCTGTGAGGACCTCGTCTaGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGT +
Preference number: 3 (lower is better)
Translates to: GEELSFSCEDLV*LMEAMAGQLQR
Trigger: ACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGCTCTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 72 bp TGGTGCTGCTCGTACAGCTTGCGCAGGGTCTCACCCTaGGTCAGCTTCAGGAGGGAGATCTTGGGAGGCACC +
Preference number: 3 (lower is better)
Translates to: WCCSYSLRRVSP*VSFRREILGGT
Trigger: GGTGCCTCCCAAGATCTCCCTCCTGAAGCTGACCCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 72 bp AGGCACTTCATGGGCACCAGCATGTCCTGCACCACGTaGTGCTGCTCGTACAGCTTGCGCAGGGTCTCACCC +
Preference number: 3 (lower is better)
Translates to: RHFMGTSMSCTT*CCSYSLRRVSP
Trigger: GGGTGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp GGGAAGATGCCTGACCACTCACACGTGTCTGTCTCTCCAGGCGGGCTCCAGCTCTTCAGGAGGGAGATCTaGGGAGGCACCATCCAGCCA +
Preference number: 3 (lower is better)
Translates to: GKMPDHSHVSVSPGGLQLFRREI*GGTIQP
Trigger: TGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGAA...GAGCTGGAGCCCGCCTGGAGAGACAGACACGTGTGAGTGGTCAGGCATCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp CCCCAGCCCTCACAAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGCGGCCTTGCAGATCTaGTCGTACACCTCGGGGAAG +
Preference number: 3 (lower is better)
Translates to: PQPSQDPAKTLAVCQALGAALQI*SYTSGK
Trigger: CTTCCCCGAGGTGTACGACAAGATCTGCAAGGCCGC...ACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp TTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCAGTGCCTGGCGGCCTaGCAGATCTTGTCGTACACC +
Preference number: 3 (lower is better)
Translates to: FSCEDLVWLMEAMAGQLQQCLAA*QILSYT
Trigger: GGTGTACGACAAGATCTGCAAGGCCGCCAGGCACTG...CTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR TCA 72 bp GGTGAGGACGCCAGGAGGCACACGGAACGCGAGGCGTaGGAGAAACCCAACTGCTCATTCTGCAGCCCAGAA +
Preference number: 3 (lower is better)
Translates to: GEDARRHTEREA*EKPNCSFCSPE
Trigger: TTCTGGGCTGCAGAATGAGCAGTTGGGTTTCTCTCACGCCTCGCGTTCCGTGTGCCTCCTGGCGTCCTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR CCA 72 bp GATGCCCCCAGCCCTCACAAGACCCTGCTAAGACACTaGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAAC +
Preference number: 3 (lower is better)
Translates to: DAPSPHKTLLRH*QCAKPWVGWVN
Trigger: GTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGGGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 72 bp AGCCAATGGAGGTCAGCAGGGCAGTCACCTGGCCCATaGTCACCAAGGGCTCCACACGGACAATTCAGGAGG +
Preference number: 3 (lower is better)
Translates to: SQWRSAGQSPGP*SPRAPHGQFRR
Trigger: CCTCCTGAATTGTCCGTGTGGAGCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCTGACCTCCATTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647912.1
3UTR CCA 72 bp CATCAAGCTCAGGCAACACGGGGAGAGTCCAGCCAATaGAGGTCAGCAGGGCAGTCACCTGGCCCATGGTCA +
Preference number: 3 (lower is better)
Translates to: HQAQATRGESSQ*RSAGQSPGPWS
Trigger: TGACCATGGGCCAGGTGACTGCCCTGCTGACCTCCATTGGCTGGACTCTCCCCGTGTTGCCTGAGCTTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp GCCTGCTGCAGGCACTTCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTGCGGAAAGCAGCCAAGCTaGAGTGAAGGGAAGATGCCT +
Preference number: 3 (lower is better)
Translates to: ACCRHFMGTSMSCTTWCCGKQPS*SEGKMP
Trigger: AGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCC...GCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp CCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCCTGCTAAGACACTGGATGGCAGGGAGAACTTaGGCCTCGGACCTGGCTTTG +
Preference number: 3 (lower is better)
Translates to: PSECLDAPSPHKTLLRHWMAGRT*ASDLAL
Trigger: CAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCAT...CCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp ATGGGTAGGGTGGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACATGGCAGGGAGAACTTaGGCCTCGGACCTGGCTTTG +
Preference number: 3 (lower is better)
Translates to: MGRVVPLPSECLDAPSPHMAGRT*ASDLAL
Trigger: CAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCAT...GTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp ACCAGCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGGTCTCAATGGCAGGGAGAACTTaGGCCTCGGACCTGGCTTTG +
Preference number: 3 (lower is better)
Translates to: TSMSCTTWCCSYSLRRVSMAGRT*ASDLAL
Trigger: CAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCAT...TGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp TCGGGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCTTGTGGTACAAGGAGGGCTCGAAACGCAGCTaGACGTACTTCTTGGCAGGG +
Preference number: 3 (lower is better)
Translates to: SGKASWQPSFSRSLWYKEGSKRS*TYFLAG
Trigger: CCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGCC...CTCCTTGTACCACAAGCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp ATGGGTAGGGTGGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACGACTCGTGGGTGAACTaGGCACAGATAGCCTCCAGG +
Preference number: 3 (lower is better)
Translates to: MGRVVPLPSECLDAPSPHDSWVN*AQIASR
Trigger: CCTGGAGGCTATCTGTGCCAAGTTCACCCACGAGTC...GTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp CTCCTCCCGGTTCATGTAGCAGTCGGCATACAGCATCTGGAAGCCATGCACGCTTGCTGCTCGTACAGCTaGCGCAGGGTCTCACCCTGG +
Preference number: 3 (lower is better)
Translates to: LLPVHVAVGIQHLEAMHACCSYS*RRVSPW
Trigger: CCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCA...AGCGTGCATGGCTTCCAGATGCTGTATGCCGACTGCTACATGAACCGGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000648728.1
3UTR-3UTR CAA 90 bp GCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGGCGGCCTTGCAGATCTaGTCGTACACCTCGGGGAAG +
Preference number: 3 (lower is better)
Translates to: AGQLQRIPFIIPAMAVHRAALQI*SYTSGK
Trigger: CTTCCCCGAGGTGTACGACAAGATCTGCAAGGCCGC...CCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 72 bp GGCCAAATGGGTAGGGTGGTTCCTTTGCCTTCTGAGTaGCTGGATGCCCCCAGCCCTCACAAGACCCTGCTA +
Preference number: 3 (lower is better)
Translates to: GQMGRVVPLPSE*LDAPSPHKTLL
Trigger: TAGCAGGGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACCCATTTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 72 bp AGGAGTAGAGCTCAGACTGCTGGGCTTCTGCCCCTCTaGTTGGCCAGAGGCACAGCTGCCTTCCCTAATGGA +
Preference number: 3 (lower is better)
Translates to: RSRAQTAGLLPL*LARGTAAFPNG
Trigger: TCCATTAGGGAAGGCAGCTGTGCCTCTGGCCAAGCAGAGGGGCAGAAGCCCAGCAGTCTGAGCTCTACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR CCA 72 bp GCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTaGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTG +
Preference number: 3 (lower is better)
Translates to: AEQRGPTPTKTK*VLGKMRPAGLV
Trigger: CACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 72 bp GGTGAACTTGGCACAGATAGCCTCCAGGCCCCGCACTaGCTCGAAACGCAGCTTGACGTACTTCTTGGCAGG +
Preference number: 3 (lower is better)
Translates to: GELGTDSLQAPH*LETQLDVLLGR
Trigger: CCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGCCAGTGCGGGGCCTGGAGGCTATCTGTGCCAAGTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp GCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGGGCTCGAAACGCAGCTaGACGTACTTCTTGGCAGGG +
Preference number: 3 (lower is better)
Translates to: AGQLQRIPFIIPAMAVHRGSKRS*TYFLAG
Trigger: CCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGCC...CCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp TTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGGGAAAGCAGCCAAGCTaGAGTGAAGGGAAGATGCCT +
Preference number: 3 (lower is better)
Translates to: FSCEDLVWLMEAMAGQLQGKQPS*SEGKMP
Trigger: AGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCC...CTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp AGTGCCTGGCGGCCTTGCAGATCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCAAGACAAAGTGGGTTTaGGGAAAGATGAGGCCTGCA +
Preference number: 3 (lower is better)
Translates to: SAWRPCRSCRTPRGRRPGKTKWV*GKMRPA
Trigger: TGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTT...GCCAGGACGCCTTCCCCGAGGTGTACGACAAGATCTGCAAGGCCGCCAGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp AGTGCCTGGCGGCCTTGCAGATCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCAAGAGGGATGAGTGGTaGGAGAAATCAAGTCGATGC +
Preference number: 3 (lower is better)
Translates to: SAWRPCRSCRTPRGRRPGKRDEW*EKSSRC
Trigger: GCATCGACTTGATTTCTCCAACCACTCATCCCTCTT...GCCAGGACGCCTTCCCCGAGGTGTACGACAAGATCTGCAAGGCCGCCAGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp CCCCAGCCCTCACAAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTAGCAGTGCAGATGTGTaGGAACAGGCCGTACTTGTG +
Preference number: 3 (lower is better)
Translates to: PQPSQDPAKTLAVCQALGSSADV*EQAVLV
Trigger: CACAAGTACGGCCTGTTCCAACACATCTGCACTGCT...ACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp CCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCCTGCTAAGACACTGGAGCAGTGCAGATGTGTaGGAACAGGCCGTACTTGTG +
Preference number: 3 (lower is better)
Translates to: PSECLDAPSPHKTLLRHWSSADV*EQAVLV
Trigger: CACAAGTACGGCCTGTTCCAACACATCTGCACTGCT...CCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp ATGGGTAGGGTGGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAGCTTGACGTACTTCTaGGCAGGGATGATGCGGATC +
Preference number: 3 (lower is better)
Translates to: MGRVVPLPSECLDAPSPHSLTYF*AGMMRI
Trigger: GATCCGCATCATCCCTGCCAAGAAGTACGTCAAGCT...GTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp AGGGTGGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCCCAGGCCCTCTCGGTTaGTCTTCAGATAGTTCTCCA +
Preference number: 3 (lower is better)
Translates to: RVVPLPSECLDAPSPHKTPGPLG*SSDSSP
Trigger: TGGAGAACTATCTGAAGACAAACCGAGAGGGCCTGG...GGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR TCA 72 bp CCCACGTTGCACAGCTCGCTGACAGTAGAGAGGGGCTaGAACCTAGGTCTCCTGACTCACACGCCACAACCA +
Preference number: 3 (lower is better)
Translates to: PTLHSSLTVERG*NLGLLTHTPQP
Trigger: TGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACTGTCAGCGAGCTGTGCAACGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR TCA 72 bp CGTCCCACAGGACCAGGGTACGGCATAGAACAGGTCTaGGTTTTCGGACGGAGTGCATCGCACAAAGCTGCC +
Preference number: 3 (lower is better)
Translates to: RPTGPGYGIEQV*VFGRSASHKAA
Trigger: GGCAGCTTTGTGCGATGCACTCCGTCCGAAAACTCAGACCTGTTCTATGCCGTACCCTGGTCCTGTGGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 72 bp CAGCCCTCACAAGACCCTGCTAAGACACTGGCAGTGTaGCAAGCCTTGGGTGGGATGGGTGAACACCCTTCA +
Preference number: 3 (lower is better)
Translates to: QPSQDPAKTLAV*QALGGMGEHPS
Trigger: TGAAGGGTGTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTTGTGAGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 72 bp TTTCTTCTGCCCCCTCCAGAGGCCAAATGGGTAGGGTaGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCA +
Preference number: 3 (lower is better)
Translates to: FLLPPPEAKWVG*FLCLLSAWMPP
Trigger: TGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACCCATTTGGCCTCTGGAGGGGGCAGAAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 72 bp GGAAGCCAGGAGGAAGGTGGTGTTGGGCTGTCAGGGTaGGAGTTCTGGAGGGGTTTCTCTTTGAAAGTGTGG +
Preference number: 3 (lower is better)
Translates to: GSQEEGGVGLSG*EFWRGFSLKVW
Trigger: CCACACTTTCAAAGAGAAACCCCTCCAGAACTCCCACCCTGACAGCCCAACACCACCTTCCTCCTGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 72 bp TTGCAGATCTTGTCGTACACCTCGGGGAAGGCGTCCTaGCAACCCAGCTTCTCTCGCAGCTTGTGGTACAAG +
Preference number: 3 (lower is better)
Translates to: LQILSYTSGKAS*QPSFSRSLWYK
Trigger: CTTGTACCACAAGCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGAGGTGTACGACAAGATCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 72 bp AGGAATCCCTCTCTCCTTAGCTTTGGCCTTTCCATCTaGAGCAGTTGCCCCTGGACCCAGCTAAGCCCACAC +
Preference number: 3 (lower is better)
Translates to: RNPSLLSFGLSI*SSCPWTQLSPH
Trigger: GTGTGGGCTTAGCTGGGTCCAGGGGCAACTGCTCCAGATGGAAAGGCCAAAGCTAAGGAGAGAGGGATTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR-3UTR CAA 90 bp CGTCCCAGTGGCTTAGGGTTGGAGGCTTCACTGGCAAAACAATGGCACTGTTTAGCAGTGTGCCAAGCCTaGGGTGGGATGGGTGAACAC +
Preference number: 3 (lower is better)
Translates to: RPSGLGLEASLAKQWHCLAVCQA*GGMGEH
Trigger: GTGTTCACCCATCCCACCCAAGGCTTGGCACACTGC...TAAACAGTGCCATTGTTTTGCCAGTGAAGCCTCCAACCCTAAGCCACTGGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp CACCAAGACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCAGACTCGTGGGTGAACTaGGCACAGATAGCCTCCAGG +
Preference number: 3 (lower is better)
Translates to: HQDKVGFGKDEACRVGEPDSWVN*AQIASR
Trigger: CCTGGAGGCTATCTGTGCCAAGTTCACCCACGAGTC...TGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp CAAGAGCTACCACTTACCCAGCACCTTCAATGTGACCAGTGCTCAACTCAGATGTGCTGCTCGTACAGCTaGCGCAGGGTCTCACCCTGG +
Preference number: 3 (lower is better)
Translates to: QELPLTQHLQCDQCSTQMCCSYS*RRVSPW
Trigger: CCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCA...CATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGGTAAGTGGTAGCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR TCA 72 bp GACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTaGACACCCTTCAATGACTCTGAGAGGATTCTGGCA +
Preference number: 3 (lower is better)
Translates to: DTGSVPSLGWDG*TPFNDSERILA
Trigger: TGCCAGAATCCTCTCAGAGTCATTGAAGGGTGTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 72 bp CTGGATTTTGGTTATATGACTAAGGGCGACAGAGGCTaGTGGCATCTCTGGCCACCGTCCCAGTGGCTTAGG +
Preference number: 3 (lower is better)
Translates to: LDFGYMTKGDRG*WHLWPPSQWLR
Trigger: CCTAAGCCACTGGGACGGTGGCCAGAGATGCCAGCAGCCTCTGTCGCCCTTAGTCATATAACCAAAATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR GCA 72 bp CAAAGCTGCCATCAGCCAGGACCAGCTCGTAAGCAGTaGAGATGTGTTGGAACAGGCCGTACTTGTGGGATG +
Preference number: 3 (lower is better)
Translates to: QSCHQPGPARKQ*RCVGTGRTCGM
Trigger: CATCCCACAAGTACGGCCTGTTCCAACACATCTGCACTGCTTACGAGCTGGTCCTGGCTGATGGCAGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp CAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTATGGCAGGGAGAACTTaGGCCTCGGACCTGGCTTTG +
Preference number: 3 (lower is better)
Translates to: QMLPCKPGMSLSGNEMGAMAGRT*ASDLAL
Trigger: CAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCAT...AGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp CACCAAGACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCATCAGAGGACAATGACTaGCCCACGTTGCACAGCTCG +
Preference number: 3 (lower is better)
Translates to: HQDKVGFGKDEACRVGEPSEDND*PTLHSS
Trigger: CGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGA...TGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp CTTCAGGAGGGAGATCTTGGGAGGCACCATCCAGCCAAAGAGGTAGCGGAAGATTGGAACAGGCCGTACTaGTGGGATGATGACTCGATG +
Preference number: 3 (lower is better)
Translates to: LQEGDLGRHHPAKEVAEDWNRPY*WDDDSM
Trigger: CATCGAGTCATCATCCCACAAGTACGGCCTGTTCCA...ATCTTCCGCTACCTCTTTGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp ACCTGGCTTCAAAGTGTTTCACACGCGGCTCCCCATATGCTCCAATGTCGATGTTTCAGGAGGGAGATCTaGGGAGGCACCATCCAGCCA +
Preference number: 3 (lower is better)
Translates to: TWLQSVSHAAPHMLQCRCFRREI*GGTIQP
Trigger: TGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGAA...ACATCGACATTGGAGCATATGGGGAGCCGCGTGTGAAACACTTTGAAGCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp TATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATGACGTGGATGTCGTTTaGGAAGGTGTGCAGGGCCTG +
Preference number: 3 (lower is better)
Translates to: YNKPGKDLGRFPSLWNGNDVDVV*EGVQGL
Trigger: CAGGCCCTGCACACCTTCCAAAACGACATCCACGTC...ATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR TCA 72 bp CCCCGGGTTGTGGATAAGGTCTGGATTTTGGTTATATaGCTAAGGGCGACAGAGGCTGCTGGCATCTCTGGC +
Preference number: 3 (lower is better)
Translates to: PRVVDKVWILVI*LRATEAAGISG
Trigger: GCCAGAGATGCCAGCAGCCTCTGTCGCCCTTAGTCATATAACCAAAATCCAGACCTTATCCACAACCCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR GCA 72 bp TCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTaGACAGGTGACCTAATGTGGAGCCTTTTCAGGCTC +
Preference number: 3 (lower is better)
Translates to: SSVSPSSFQPWL*TGDLMWSLFRL
Trigger: GAGCCTGAAAAGGCTCCACATTAGGTCACCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 72 bp TGGAAGCCATGCACGCTGCGGACAAACTTCTCCAGCTaGCTCATGCAGGACCTGGCTTCAAAGTGTTTCACA +
Preference number: 3 (lower is better)
Translates to: WKPCTLRTNFSS*LMQDLASKCFT
Trigger: TGTGAAACACTTTGAAGCCAGGTCCTGCATGAGGCAGCTGGAGAAGTTTGTCCGCAGCGTGCATGGCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000648728.1
3UTR GCA 72 bp ACTCACCCATGCACGCTGCGGACAAACTTCTCCAGCTaGCTCATGCAGGACCTGGCTTCAAAGTGTTTCACA +
Preference number: 3 (lower is better)
Translates to: THPCTLRTNFSS*LMQDLASKCFT
Trigger: TGTGAAACACTTTGAAGCCAGGTCCTGCATGAGGCAGCTGGAGAAGTTTGTCCGCAGCGTGCATGGGTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR CCA 72 bp GGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATaGCTGTGCACAGGTGACCTAATGTGGAGCCTTTTC +
Preference number: 3 (lower is better)
Translates to: GNSSVSPSSFQP*LCTGDLMWSLF
Trigger: GAAAAGGCTCCACATTAGGTCACCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 72 bp GATTTTGGTTATATGACTAAGGGCGACAGAGGCTGCTaGCATCTCTGGCCACCGTCCCAGTGGCTTAGGGTT +
Preference number: 3 (lower is better)
Translates to: DFGYMTKGDRGC*HLWPPSQWLRV
Trigger: AACCCTAAGCCACTGGGACGGTGGCCAGAGATGCCAGCAGCCTCTGTCGCCCTTAGTCATATAACCAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp AACTCCATCCAAAACCATCACATGGATGGCCAGGGACAGGACTGGCTACAAAAAGCAGTGTGCCAAGCCTaGGGTGGGATGGGTGAACAC +
Preference number: 3 (lower is better)
Translates to: NSIQNHHMDGQGQDWLQKAVCQA*GGMGEH
Trigger: GTGTTCACCCATCCCACCCAAGGCTTGGCACACTGC...TTTTTGTAGCCAGTCCTGTCCCTGGCCATCCATGTGATGGTTTTGGATGGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp CACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCATGGAACAGGCCGTACTaGTGGGATGATGACTCGATG +
Preference number: 3 (lower is better)
Translates to: HCRCDAEREATRATTYPAWNRPY*WDDDSM
Trigger: CATCGAGTCATCATCCCACAAGTACGGCCTGTTCCA...TGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp GGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTGACTCGTGGGTGAACTaGGCACAGATAGCCTCCAGG +
Preference number: 3 (lower is better)
Translates to: GCDSKIPSFPSPGLWIRSDSWVN*AQIASR
Trigger: CCTGGAGGCTATCTGTGCCAAGTTCACCCACGAGTC...AGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp AACTCCATCCAAAACCATCACATGGATGGCCAGGGACAGGACTGGCTACAAAAACAGTGCCTGGCGGCCTaGCAGATCTTGTCGTACACC +
Preference number: 3 (lower is better)
Translates to: NSIQNHHMDGQGQDWLQKQCLAA*QILSYT
Trigger: GGTGTACGACAAGATCTGCAAGGCCGCCAGGCACTG...TTTTTGTAGCCAGTCCTGTCCCTGGCCATCCATGTGATGGTTTTGGATGGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
3UTR TCA 72 bp GGCTGTCAGGGTGGGAGTTCTGGAGGGGTTTCTCTTTaGAAGTGTGGATCTAGGAAAGCAGCCAAGCTTGAG +
Preference number: 3 (lower is better)
Translates to: GCQGGSSGGVSL*KCGSRKAAKLE
Trigger: CTCAAGCTTGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCCAGAACTCCCACCCTGACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 72 bp ACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTaGAGATGTGACGCTGAACGGGAAGCAACAAGAGCT +
Preference number: 3 (lower is better)
Translates to: TGDLMWSLFRLH*RCDAEREATRA
Trigger: AGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 72 bp CCTGGCTTCAAAGTGTTTCACACGCGGCTCCCCATATaGTCCAATGTCGATGTAGAGCTCTGCCTCATTTCC +
Preference number: 3 (lower is better)
Translates to: PGFKVFHTRLPI*SNVDVELCLIS
Trigger: GGAAATGAGGCAGAGCTCTACATCGACATTGGAGCATATGGGGAGCCGCGTGTGAAACACTTTGAAGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp AGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGGGAAAGCAGCCAAGCTaGAGTGAAGGGAAGATGCCT +
Preference number: 3 (lower is better)
Translates to: RDEWLEKSSRCSFLPAPRGKQPS*SEGKMP
Trigger: AGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCC...CCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp AACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCGGAAAGCAGCCAAGCTaGAGTGAAGGGAAGATGCCT +
Preference number: 3 (lower is better)
Translates to: NQALRYNKPGKDLGRFPSGKQPS*SEGKMP
Trigger: AGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCC...GGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp ACCCAGCACCTTCAATGTGACCAGTGCTCAACTCAGATGACAACAACCTGCAAGTCAGAGGACAATGACTaGCCCACGTTGCACAGCTCG +
Preference number: 3 (lower is better)
Translates to: TQHLQCDQCSTQMTTTCKSEDND*PTLHSS
Trigger: CGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGA...CTTGCAGGTTGTTGTCATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp CACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCAGGCTTTCCGTGGGTTTaGCAACCACAGTGTCTAAGA +
Preference number: 3 (lower is better)
Translates to: HCRCDAEREATRATTYPAGFPWV*QPQCLR
Trigger: TCTTAGACACTGTGGTTGCAAAACCCACGGAAAGCC...TGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp CACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCATTCATGCCTTTCTCCTaGGCCCCCATGACCAAAGAA +
Preference number: 3 (lower is better)
Translates to: HCRCDAEREATRATTYPAFMPFS*APMTKE
Trigger: TTCTTTGGTCATGGGGGCCAAGGAGAAAGGCATGAA...TGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp AAAGAGGTAGCGGAAGATGGGGTTGTTGCCAAAGGGGATAATGTCCTGGAGCTCAGCAGTGCAGATGTGTaGGAACAGGCCGTACTTGTG +
Preference number: 3 (lower is better)
Translates to: KEVAEDGVVAKGDNVLELSSADV*EQAVLV
Trigger: CACAAGTACGGCCTGTTCCAACACATCTGCACTGCT...GAGCTCCAGGACATTATCCCCTTTGGCAACAACCCCATCTTCCGCTACCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp CAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTAGCTTGACGTACTTCTaGGCAGGGATGATGCGGATC +
Preference number: 3 (lower is better)
Translates to: QMLPCKPGMSLSGNEMGASLTYF*AGMMRI
Trigger: GATCCGCATCATCCCTGCCAAGAAGTACGTCAAGCT...AGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp AACTCCATCCAAAACCATCACATGGATGGCCAGGGACAGGACTGGCTACAAAAAGGCTCGAAACGCAGCTaGACGTACTTCTTGGCAGGG +
Preference number: 3 (lower is better)
Translates to: NSIQNHHMDGQGQDWLQKGSKRS*TYFLAG
Trigger: CCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGCC...TTTTTGTAGCCAGTCCTGTCCCTGGCCATCCATGTGATGGTTTTGGATGGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp ACCGGAGGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATACCTCTCTCCTTAGCTTaGGCCTTTCCATCTGGAGCA +
Preference number: 3 (lower is better)
Translates to: TGGCDSKIPSFPSPGLWIPLSLA*AFPSGA
Trigger: TGCTCCAGATGGAAAGGCCAAAGCTAAGGAGAGAGG...TATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCCTCCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR-3UTR CAA 90 bp CTAGGAAAGCAGCCAAGCTTGAGTGAAGGGAAGATGCCTGACCACTCACACGTGAAGACAAAGTGGGTTTaGGGAAAGATGAGGCCTGCA +
Preference number: 3 (lower is better)
Translates to: LGKQPSLSEGKMPDHSHVKTKWV*GKMRPA
Trigger: TGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTT...CACGTGTGAGTGGTCAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp CCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTGGATTTTGGTTATATGACTCAGAGGACAATGACTaGCCCACGTTGCACAGCTCG +
Preference number: 3 (lower is better)
Translates to: PSFPSPGLWIRSGFWLYDSEDND*PTLHSS
Trigger: CGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGA...GTCATATAACCAAAATCCAGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp CTGATTCTAAAGAAAACCTTCATGCAGCCAAGAAACTCAGGGCTCTGGAGGGGAGGTAGGGTGGTTCCTTaGCCTTCTGAGTGCCTGGAT +
Preference number: 3 (lower is better)
Translates to: LILKKTFMQPRNSGLWRGGRVVP*PSECLD
Trigger: ATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACC...TCCCCTCCAGAGCCCTGAGTTTCTTGGCTGCATGAAGGTTTTCTTTAGAATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR CCA 72 bp AAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCCTCTaGAACGGAAATGGAACTTTCTCTGAGCTTAGGATT +
Preference number: 3 (lower is better)
Translates to: KPGKDLGRFPSL*NGNGTFSELRI
Trigger: AATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp AGTTGCATAAACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGGGTAGGGTGGTTCCTTaGCCTTCTGAGTGCCTGGAT +
Preference number: 3 (lower is better)
Translates to: SCINNQALRYNKPGKDLGGRVVP*PSECLD
Trigger: ATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACC...CCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTATGCAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp ATCATCAGTTTTGCACTGAGCAAGGAAGCACATGGGTCTCCTATGAGAGCTAATTTCCATCTGGAGCAGTaGCCCCTGGACCCAGCTAAG +
Preference number: 3 (lower is better)
Translates to: IISFALSKEAHGSPMRANFHLEQ*PLDPAK
Trigger: CTTAGCTGGGTCCAGGGGCAACTGCTCCAGATGGAA...ATTAGCTCTCATAGGAGACCCATGTGCTTCCTTGCTCAGTGCAAAACTGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR-3UTR CAA 90 bp TGCAGCTCAGAGGACAATGACTTGCCCACGTTGCACAGCTCGCTGACAGTAGAGTTTGGAGGATTTCTCTaGTTTAACCCCGTTAACCTG +
Preference number: 3 (lower is better)
Translates to: CSSEDNDLPTLHSSLTVEFGGFL*FNPVNL
Trigger: CAGGTTAACGGGGTTAAACAAGAGAAATCCTCCAAA...CTCTACTGTCAGCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGAGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR-3UTR CAA 90 bp TCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGTGGGGAGTGGAAAGCAGCCAAGCTaGAGTGAAGGGAAGATGCCT +
Preference number: 3 (lower is better)
Translates to: SELRICKALKLTTAGVGSGKQPS*SEGKMP
Trigger: AGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCC...ACTCCCCACCCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp AGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGCTTTCCGTGGGTTTaGCAACCACAGTGTCTAAGA +
Preference number: 3 (lower is better)
Translates to: SFPYMTQFLLRFGFSAEAGFPWV*QPQCLR
Trigger: TCTTAGACACTGTGGTTGCAAAACCCACGGAAAGCC...AGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp GAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAAGCTTGAGTGAACCAGGCCCTCTCGGTTaGTCTTCAGATAGTTCTCCA +
Preference number: 3 (lower is better)
Translates to: EGFLFESVDLGKQPSLSEPGPLG*SSDSSP
Trigger: TGGAGAACTATCTGAAGACAAACCGAGAGGGCCTGG...TTCACTCAAGCTTGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp CACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCACACAATTGGATAAGCTaGACACATGCATGCAACCAA +
Preference number: 3 (lower is better)
Translates to: HCRCDAEREATRATTYPAHNWIS*THACNQ
Trigger: TTGGTTGCATGCATGTGTCAAGCTTATCCAATTGTG...TGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR TCA 72 bp GCAACAAGAGCTACCACTTACCCAGCACCTTCAATGTaGCCAGTGCTCAACTCAGATGACAACAACCTGCAA +
Preference number: 3 (lower is better)
Translates to: ATRATTYPAPSM*PVLNSDDNNLQ
Trigger: TTGCAGGTTGTTGTCATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGGTAAGTGGTAGCTCTTGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR TCA 72 bp ACTGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATaGCGCAATTCCTTCTCAGATTCGGGTTTTCAGCTG +
Preference number: 3 (lower is better)
Translates to: TGSAPLIPASLT*RNSFSDSGFQL
Trigger: CAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR TCA 72 bp AGATGGGAGCTGACCTTGGGGTTGAAGGAAGGATCTTaGATGACAGATAATCCCCAAGTGTCCACTGGATCA +
Preference number: 3 (lower is better)
Translates to: RWELTLGLKEGS*MTDNPQVSTGS
Trigger: TGATCCAGTGGACACTTGGGGATTATCTGTCATTCAAGATCCTTCCTTCAACCCCAAGGTCAGCTCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR TCA 72 bp GTTATCCGTTGCCCTCTGCCATCCCCAGGCAACTACTaGTGCGCTATCAGTATGGATTCATGTGTGTTTTTG +
Preference number: 3 (lower is better)
Translates to: VIRCPLPSPGNY*CAISMDSCVFL
Trigger: CAAAAACACACATGAATCCATACTGATAGCGCATCAGTAGTTGCCTGGGGATGGCAGAGGGCAACGGATAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR GCA 72 bp ATTCTGGCACCTGGAATGACAAGACAGATGCTTCCCTaGAAGCCAGGTATGAGCCTTTCTGGAAATGAGATG +
Preference number: 3 (lower is better)
Translates to: ILAPGMTRQMLP*KPGMSLSGNEM
Trigger: CATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTGTCTTGTCATTCCAGGTGCCAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR GCA 72 bp AGGGGAGAGCCTTACTCTGATACTTTCCACATGCACTaGCCACTGGCATCAAGTTTAACTCCATCCAAAACC +
Preference number: 3 (lower is better)
Translates to: RGEPYSDTFHMH*PLASSLTPSKT
Trigger: GGTTTTGGATGGAGTTAAACTTGATGCCAGTGGGCAGTGCATGTGGAAAGTATCAGAGTAAGGCTCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR CCA 72 bp AAGAAAACCTTCATGCAGCCAAGAAACTCAGGGCTCTaGAGGGGAGAGCCTTACTCTGATACTTTCCACATG +
Preference number: 3 (lower is better)
Translates to: KKTFMQPRNSGL*RGEPYSDTFHM
Trigger: CATGTGGAAAGTATCAGAGTAAGGCTCTCCCCTCCAGAGCCCTGAGTTTCTTGGCTGCATGAAGGTTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp CTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGCTTTCCGTGGGTTTaGCAACCACAGTGTCTAAGA +
Preference number: 3 (lower is better)
Translates to: LSSLNSSFPYMTQFLLRFGFPWV*QPQCLR
Trigger: TCTTAGACACTGTGGTTGCAAAACCCACGGAAAGCC...GAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp ATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTGGATTTTGGTTATATCCAATGCTATTCAGCTaGCTGGGCTCTGCCTCATCT +
Preference number: 3 (lower is better)
Translates to: IPSFPSPGLWIRSGFWLYPMLFS*LGSASS
Trigger: AGATGAGGCAGAGCCCAGCAAGCTGAATAGCATTGG...ATATAACCAAAATCCAGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp ATCATCAGTTTTGCACTGAGCAAGGAAGCACATGGGTCTCCTATGAGAGCTAATCGGAAGATGGGGTTGTaGCCAAAGGGGATAATGTCC +
Preference number: 3 (lower is better)
Translates to: IISFALSKEAHGSPMRANRKMGL*PKGIMS
Trigger: GGACATTATCCCCTTTGGCAACAACCCCATCTTCCG...ATTAGCTCTCATAGGAGACCCATGTGCTTCCTTGCTCAGTGCAAAACTGATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp ATCATCAGTTTTGCACTGAGCAAGGAAGCACATGGGTCTCCTATGAGAGCTAATGGCTTTCCGTGGGTTTaGCAACCACAGTGTCTAAGA +
Preference number: 3 (lower is better)
Translates to: IISFALSKEAHGSPMRANGFPWV*QPQCLR
Trigger: TCTTAGACACTGTGGTTGCAAAACCCACGGAAAGCC...ATTAGCTCTCATAGGAGACCCATGTGCTTCCTTGCTCAGTGCAAAACTGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR TCA 72 bp CCCAGCACCTTCAATGTGACCAGTGCTCAACTCAGATaGCAACAACCTGCAAGTAGGTATTACTATCCCTTT +
Preference number: 3 (lower is better)
Translates to: PSTFNVTSAQLR*QQPASRYYYPF
Trigger: AAAGGGATAGTAATACCTACTTGCAGGTTGTTGTCATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp CTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAAAGACAAAGTGGGTTTaGGGAAAGATGAGGCCTGCA +
Preference number: 3 (lower is better)
Translates to: LNSSFPYMTQFLLRFGFSKTKWV*GKMRPA
Trigger: TGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTT...TGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp GAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAAGCTTGAGTGAAATAAACAACCAAGCTTaGCGTTATAACAAGCCAGGG +
Preference number: 3 (lower is better)
Translates to: EGFLFESVDLGKQPSLSEINNQA*RYNKPG
Trigger: CCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTAT...TTCACTCAAGCTTGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR TCA 72 bp CATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTaGGGCTGGGCAGTTCTTAAGATAGAGTTGCATAAA +
Preference number: 3 (lower is better)
Translates to: HDAIPSQIRVFS*GWAVLKIELHK
Trigger: TTTATGCAACTCTATCTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR TCA 72 bp GATAATCCCCAAGTGTCCACTGGATCATTTTTCCTCTaGCTTTCCACACAAATGAGGCTTTCCGTGGGTTTT +
Preference number: 3 (lower is better)
Translates to: DNPQVSTGSFFL*LSTQMRLSVGF
Trigger: AAAACCCACGGAAAGCCTCATTTGTGTGGAAAGTCAGAGGAAAAATGATCCAGTGGACACTTGGGGATTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 72 bp GCTAAGAAGACTGCCTCTTTCCAGGCAAGATTTTACTaGAGCAACATAACCGGAGGGTGTGATTCCAAAATA +
Preference number: 3 (lower is better)
Translates to: AKKTASFQARFY*SNITGGCDSKI
Trigger: TATTTTGGAATCACACCCTCCGGTTATGTTGCTCCAGTAAAATCTTGCCTGGAAAGAGGCAGTCTTCTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR-3UTR CAA 90 bp GGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACACCAGGCCCTCTCGGTTaGTCTTCAGATAGTTCTCCA +
Preference number: 3 (lower is better)
Translates to: GNGTFSELRICKALKLTTPGPLG*SSDSSP
Trigger: TGGAGAACTATCTGAAGACAAACCGAGAGGGCCTGG...TGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CCA 72 bp CCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTaGCCAAAGAAACTGGCTACAATTCTGATTCTAAAG +
Preference number: 3 (lower is better)
Translates to: PSLSVISKYSSF*PKKLATILILK
Trigger: CTTTAGAATCAGAATTGTAGCCAGTTTCTTTGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CCCAGCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTCCGCGCGGTAAGCGCTaGGGGTTCGCGCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: PSPCCRAARTHSHQDKVGPRGKR*GFAPPV
Trigger: GACAGGAGGCGCGAACCCGCAGCGCTTACCGCGCGG...ACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GCCTCCAGGCCCCGCACTGGCTCGAAACGCAGCTTGACGTACTTCTTGGCAGGGATGTCCCGCACGCGCTaGTCGTGCAGGCGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: ASRPRTGSKRSLTYFLAGMSRTR*SCRRGA
Trigger: CGCTCCGCGCCTGCACGAGCAGCGCGTGCGGGACAT...CCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGCCAGTGCGGGGCCTGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GGTGGGGAAGAGCTGTCCTTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGCCGCGCGGTAAGCGCTaGGGGTTCGCGCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: GGEELSFSCEDLVWLMEAPRGKR*GFAPPV
Trigger: GACAGGAGGCGCGAACCCGCAGCGCTTACCGCGCGG...CGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGCTCTTCCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCCGCACGCGCTGCTCGTaGAGGCGCGGAGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LVWLMEAMAGQLQRIPFIRTRCS*RRGALL
Trigger: CAGCAGCGCTCCGCGCCTGCACGAGCAGCGCGTGCG...GATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CAA 72 bp CGGGCTCCAGCTCAGTGCCTGGCGGCCTTGCAGATCTaGTCGTACACCTCGGGGAAGGCGTCCTGGCAACCC +
Preference number: 4 (lower is better)
Translates to: RAPAQCLAALQI*SYTSGKASWQP
Trigger: GGGTTGCCAGGACGCCTTCCCCGAGGTGTACGACAAGATCTGCAAGGCCGCCAGGCACTGAGCTGGAGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CTCCAGCTGCCTCATGCAGGACCTGGCTTCAAAGTGTTTCACACGCGGCTCCCCCCGCGCGGTAAGCGCTaGGGGTTCGCGCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: LQLPHAGPGFKVFHTRLPPRGKR*GFAPPV
Trigger: GACAGGAGGCGCGAACCCGCAGCGCTTACCGCGCGG...GGGGAGCCGCGTGTGAAACACTTTGAAGCCAGGTCCTGCATGAGGCAGCTGGAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TCCCCTGGATCCAATTCAGAGCGGAGACCACTCTCTCCACCTAGGTGTCCCAGGCGCACGCGCTGCTCGTaGAGGCGCGGAGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SPGSNSERRPLSPPRCPRRTRCS*RRGALL
Trigger: CAGCAGCGCTCCGCGCCTGCACGAGCAGCGCGTGCG...CCTGGGACACCTAGGTGGAGAGAGTGGTCTCCGCTCTGAATTGGATCCAGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CCCAGCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTGCTGCTCGTACAGCTTaGGCAGGGTCTCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: PSPCCRAARTHSHQDKVGAARTA*AGSHPG
Trigger: CCCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGC...ACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CCCAGCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTGTGTGCAGGGCCTGCTaGAGGCACTTCATGGGCACC +
Preference number: 4 (lower is better)
Translates to: PSPCCRAARTHSHQDKVGVCRAC*RHFMGT
Trigger: GGTGCCCATGAAGTGCCTGCAGCAGGCCCTGCACAC...ACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TCGGGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCTTGTGGTACAAGGAGCTCCCCAGCCCCTGCTaGAGAGCAGCGCGGACCCAC +
Preference number: 4 (lower is better)
Translates to: SGKASWQPSFSRSLWYKELPSPC*RAARTH
Trigger: GTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGGGAG...CTCCTTGTACCACAAGCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTTTTGGGACTCAGTGGTGGCTaGGGTGGGCCTGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: APAAEQRGPTPTKTKWVLGLSGG*GGPAGP
Trigger: TGGGCCTGCAGGCCCACCCCAGCCACCACTGAGTCC...CAAAACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GCCTGCTGCAGGCACTTCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTGCGAGTGGACTCAGTGGTaGCTGGGGTGGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ACCRHFMGTSMSCTTWCCEWTQW*LGWACR
Trigger: CCTGCAGGCCCACCCCAGCCACCACTGAGTCCACTC...GCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CCCAGCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTGGCCTGCAGGGTTGGTaGGCCAAGAAGAATGAGCCC +
Preference number: 4 (lower is better)
Translates to: PSPCCRAARTHSHQDKVGGLQGW*AKKNEP
Trigger: GGGCTCATTCTTCTTGGCTCACCAACCCTGCAGGCC...ACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CCCAGCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTACGAAGTGGTTCTCCTaGCGCTGGGACTCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PSPCCRAARTHSHQDKVGTKWFS*RWDSWV
Trigger: CACCCACGAGTCCCAGCGGCAGGAGAACCACTTCGT...ACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GCCTCCAGGCCCCGCACTGGCTCGAAACGCAGCTTGACGTACTTCTTGGCAGGGGGAGCTCCCAGAAGATaGTGCGCGTGTGGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: ASRPRTGSKRSLTYFLAGGAPRR*CACGGG
Trigger: ACCACCGCCACACGCGCAGCATCTTCTGGGAGCTCC...CCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGCCAGTGCGGGGCCTGGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GCCTCCAGGCCCCGCACTGGCTCGAAACGCAGCTTGACGTACTTCTTGGCAGGGGTGTGCAGGGCCTGCTaGAGGCACTTCATGGGCACC +
Preference number: 4 (lower is better)
Translates to: ASRPRTGSKRSLTYFLAGVCRAC*RHFMGT
Trigger: GGTGCCCATGAAGTGCCTGCAGCAGGCCCTGCACAC...CCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGCCAGTGCGGGGCCTGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGTGGGGAAGAGCTGTCCTTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGTCCCGCACCTGCTTCTaGATGTCCCGCACGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GGEELSFSCEDLVWLMEASRTCF*MSRTRC
Trigger: GCAGCGCGTGCGGGACATCCAGAAGCAGGTGCGGGA...CGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGCTCTTCCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCCAGCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTAGCCCTTCCACGAAGTaGTTCTCCTGCCGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PSPCCRAARTHSHQDKVGSPSTK*FSCRWD
Trigger: GTCCCAGCGGCAGGAGAACCACTTCGTGGAAGGGCT...ACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTGCTGCAGGCACTTCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTGCTCCCTCGGACCTGGCTTTaGCACAGCGCATCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LLQALHGHQHVLHHVVLLPRTWL*HSASGA
Trigger: GGCCCCAGATGCGCTGTGCCAAAGCCAGGTCCGAGG...GAGCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CAA 72 bp AAGTGGTTCTCCTGCCGCTGGGACTCGTGGGTGAACTaGGCACAGATAGCCTCCAGGCCCCGCACTGGCTCG +
Preference number: 4 (lower is better)
Translates to: KWFSCRWDSWVN*AQIASRPRTGS
Trigger: CGAGCCAGTGCGGGGCCTGGAGGCTATCTGTGCCAAGTTCACCCACGAGTCCCAGCGGCAGGAGAACCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CCCCAGCCCTCACAAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTCCCAGCGCTGGTGGATaGGCACGAACTCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PQPSQDPAKTLAVCQALGPSAGG*ARTPAP
Trigger: AGGGGCTGGAGTTCGTGCTCATCCACCAGCGCTGGG...ACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GTGCCTGGCGGCCTTGCAGATCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCAGGCCTGCAGGGTTGGTaGGCCAAGAAGAATGAGCCC +
Preference number: 4 (lower is better)
Translates to: VPGGLADLVVHLGEGVLAGLQGW*AKKNEP
Trigger: GGGCTCATTCTTCTTGGCTCACCAACCCTGCAGGCC...TGCCAGGACGCCTTCCCCGAGGTGTACGACAAGATCTGCAAGGCCGCCAGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TGCAGCTCAGAGGACAATGACTTGCCCACGTTGCACAGCTCGCTGACAGTAGAGCGCACGCGCTGCTCGTaGAGGCGCGGAGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CSSEDNDLPTLHSSLTVERTRCS*RRGALL
Trigger: CAGCAGCGCTCCGCGCCTGCACGAGCAGCGCGTGCG...CTCTACTGTCAGCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGAGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGGTCTCACCCTGGAGCTCCCAGAAGATaGTGCGCGTGTGGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: ACPAPRGAARTACAGSHPGAPRR*CACGGG
Trigger: ACCACCGCCACACGCGCAGCATCTTCTGGGAGCTCC...AGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GGGAAGATGCCTGACCACTCACACGTGTCTGTCTCTCCAGGCGGGCTCCAGCTCGCTGCTCGTACAGCTTaGGCAGGGTCTCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: GKMPDHSHVSVSPGGLQLAARTA*AGSHPG
Trigger: CCCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGC...GAGCTGGAGCCCGCCTGGAGAGACAGACACGTGTGAGTGGTCAGGCATCTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GGGAAGATGCCTGACCACTCACACGTGTCTGTCTCTCCAGGCGGGCTCCAGCTCGGCACCAGCATGTCCTaGACCACGTGGTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: GKMPDHSHVSVSPGGLQLGTSMS*TTWCCS
Trigger: CGAGCAGCACCACGTGGTGCAGGACATGCTGGTGCC...GAGCTGGAGCCCGCCTGGAGAGACAGACACGTGTGAGTGGTCAGGCATCTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCCGGGCTCCAGCTCAGTaGCTGGCGGCCTTGCAGATC +
Preference number: 4 (lower is better)
Translates to: GGDGRATPAYPLHHSSHGRAPAQ*LAALQI
Trigger: GATCTGCAAGGCCGCCAGGCACTGAGCTGGAGCCCG...GCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGTGACCCTCCCCAGCCCCTGCTaGAGAGCAGCGCGGACCCAC +
Preference number: 4 (lower is better)
Translates to: ATPAYPLHHSSHGCAQVTLPSPC*RAARTH
Trigger: GTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGGGAG...GGTCACCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCCAGCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTACGAACACCCAGCGCTaGTGGATGAGCACGAACTCC +
Preference number: 4 (lower is better)
Translates to: PSPCCRAARTHSHQDKVGTNTQR*WMSTNS
Trigger: GGAGTTCGTGCTCATCCACCAGCGCTGGGTGTTCGT...ACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGGTCTCACCCTCTCCAGGCCCCGCACTaGCTCGAAACGCAGCTTGAC +
Preference number: 4 (lower is better)
Translates to: ACPAPRGAARTACAGSHPLQAPH*LETQLD
Trigger: GTCAAGCTGCGTTTCGAGCCAGTGCGGGGCCTGGAG...AGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGTGGGGAAGAGCTGTCCTTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGCGCAGGGTCTCACCCTaGGTCAGCTTCAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GGEELSFSCEDLVWLMEARRVSP*VSFRRE
Trigger: CTCCCTCCTGAAGCTGACCCAGGGTGAGACCCTGCG...CGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGCTCTTCCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CAGGGCCTGCTGCAGGCACTTCATGGGCACCAGCATGTCCTGCACCACGTGGTGTGCACTAGGCCTGGCTaGCTGGGCAGGATGAACGGA +
Preference number: 4 (lower is better)
Translates to: QGLLQALHGHQHVLHHVVCTRPG*LGRMNG
Trigger: TCCGTTCATCCTGCCCAGCCAGCCAGGCCTAGTGCA...CACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAGGCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCGAGTGGACTCAGTGGTaGCTGGGGTGGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GGDGRATPAYPLHHSSHGEWTQW*LGWACR
Trigger: CCTGCAGGCCCACCCCAGCCACCACTGAGTCCACTC...GCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCCAGCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTCAGTGTGCCAAGCCTTaGGTGGGATGGGTGAACACC +
Preference number: 4 (lower is better)
Translates to: PSPCCRAARTHSHQDKVGQCAKP*VGWVNT
Trigger: GGTGTTCACCCATCCCACCCAAGGCTTGGCACACTG...ACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGTGCCTGGCGGCCTTGCAGATCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCTGGCCACCGTCCCAGTaGCTTAGGGTTGGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: SAWRPCRSCRTPRGRRPGWPPSQ*LRVGGF
Trigger: GAAGCCTCCAACCCTAAGCCACTGGGACGGTGGCCA...GCCAGGACGCCTTCCCCGAGGTGTACGACAAGATCTGCAAGGCCGCCAGGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGCCCAGCGCTGGTGGATaGGCACGAACTCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: AGQLQRIPFIIPAMAVHRPSAGG*ARTPAP
Trigger: AGGGGCTGGAGTTCGTGCTCATCCACCAGCGCTGGG...CCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CTCGAAACGCAGCTTGACGTACTTCTTGGCAGGGATGATGCGGATCTCAGCGGCCACGTAGTGAGACAGTaGGCCAGCCAGGGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: LETQLDVLLGRDDADLSGHVVRQ*ASQGAP
Trigger: CGGGGCGCCCTGGCTGGCTCACTGTCTCACTACGTG...GCCGCTGAGATCCGCATCATCCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTCTCCACTTTCCCACCTaGTGCTGTCCACTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SCEDLVWLMEAMAGQLQRLHFPT*CCPLPS
Trigger: GCTGGGGAGTGGACAGCATCAGGTGGGAAAGTGGAG...ACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACGGCACCAAGGATGGCAGGGAGAACTTTGGCCTCGGACCTGGCTTTGGCACAGGTGTGCAGGGCCTGCTaGAGGCACTTCATGGGCACC +
Preference number: 4 (lower is better)
Translates to: TAPRMAGRTLASDLALAQVCRAC*RHFMGT
Trigger: GGTGCCCATGAAGTGCCTGCAGCAGGCCCTGCACAC...CTGTGCCAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCATCCTTGGTGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGGTGTGCAGGGCCTGCTaGAGGCACTTCATGGGCACC +
Preference number: 4 (lower is better)
Translates to: FSCEDLVWLMEAMAGQLQVCRAC*RHFMGT
Trigger: GGTGCCCATGAAGTGCCTGCAGCAGGCCCTGCACAC...CTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCCTGCTAAGACACTGGTCCATTCCACTGGGCTaGCCCCTGGAAGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PSECLDAPSPHKTLLRHWSIPLG*PLEARR
Trigger: CCTCCTGGCTTCCAGGGGGCAGCCCAGTGGAATGGA...CCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACCAGCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGGTCTCATCCATTCCACTGGGCTaGCCCCTGGAAGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TSMSCTTWCCSYSLRRVSSIPLG*PLEARR
Trigger: CCTCCTGGCTTCCAGGGGGCAGCCCAGTGGAATGGA...TGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACGGCACCAAGGATGGCAGGGAGAACTTTGGCCTCGGACCTGGCTTTGGCACAGTCCATTCCACTGGGCTaGCCCCTGGAAGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TAPRMAGRTLASDLALAQSIPLG*PLEARR
Trigger: CCTCCTGGCTTCCAGGGGGCAGCCCAGTGGAATGGA...CTGTGCCAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCATCCTTGGTGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CCCAGCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTAAGACACTGGCAGTGTaGCAAGCCTTGGGTGGGATG +
Preference number: 4 (lower is better)
Translates to: PSPCCRAARTHSHQDKVGKTLAV*QALGGM
Trigger: CATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTT...ACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCTGGGCTTCTGCCCCTCTaGTTGGCCAGAGGCACAGCT +
Preference number: 4 (lower is better)
Translates to: SCRTPRGRRPGNPASLAAGLLPL*LARGTA
Trigger: AGCTGTGCCTCTGGCCAAGCAGAGGGGCAGAAGCCC...AGCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGAGGTGTACGACAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR CCA 90 bp ACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACACCTCCCGCACCTGCTTCTaGATGTCCCGCACGCGCTGC +
Preference number: 4 (lower is better)
Translates to: TLLRHWQCAKPWVGWVNTSRTCF*MSRTRC
Trigger: GCAGCGCGTGCGGGACATCCAGAAGCAGGTGCGGGA...GGTGTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTTTTGCAGTCACCTGGCCCATaGTCACCAAGGGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: APAAEQRGPTPTKTKWVLQSPGP*SPRAPH
Trigger: GTGTGGAGCCCTTGGTGACCATGGGCCAGGTGACTG...CAAAACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGAGCAGGGCAGTCACCTaGCCCATGGTCACCAAGGGC +
Preference number: 4 (lower is better)
Translates to: FSCEDLVWLMEAMAGQLQSRAVT*PMVTKG
Trigger: GCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCT...CTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAAGCAGGGCAGTCACCTaGCCCATGGTCACCAAGGGC +
Preference number: 4 (lower is better)
Translates to: SWAPACPAPRGAARTACASRAVT*PMVTKG
Trigger: GCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCT...TGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGTGCCTGGCGGCCTTGCAGATCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCGGAGAGTCCAGCCAATaGAGGTCAGCAGGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: SAWRPCRSCRTPRGRRPGGESSQ*RSAGQS
Trigger: TGACTGCCCTGCTGACCTCCATTGGCTGGACTCTCC...GCCAGGACGCCTTCCCCGAGGTGTACGACAAGATCTGCAAGGCCGCCAGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCCTGCTAAGACACTGGCTCCAGGCCCCGCACTaGCTCGAAACGCAGCTTGAC +
Preference number: 4 (lower is better)
Translates to: PSECLDAPSPHKTLLRHWLQAPH*LETQLD
Trigger: GTCAAGCTGCGTTTCGAGCCAGTGCGGGGCCTGGAG...CCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGGTCTCACCCTAGCCCTTCCACGAAGTaGTTCTCCTGCCGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: ACPAPRGAARTACAGSHPSPSTK*FSCRWD
Trigger: GTCCCAGCGGCAGGAGAACCACTTCGTGGAAGGGCT...AGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGTGCCTGGCGGCCTTGCAGATCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCCTCCAGCTCAGTGCCTaGCGGCCTTGCAGATCTTGT +
Preference number: 4 (lower is better)
Translates to: SAWRPCRSCRTPRGRRPGLQLSA*RPCRSC
Trigger: ACAAGATCTGCAAGGCCGCCAGGCACTGAGCTGGAG...GCCAGGACGCCTTCCCCGAGGTGTACGACAAGATCTGCAAGGCCGCCAGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GCCTGCTGCAGGCACTTCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTGCAAGCCAGGAGGAAGGTaGTGTTGGGCTGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: ACCRHFMGTSMSCTTWCCKPGGR*CWAVRV
Trigger: CACCCTGACAGCCCAACACCACCTTCCTCCTGGCTT...GCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGTGCCTGGCGGCCTTGCAGATCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCCCTGAGATCCCAGGGTaGGGAAGAGCTGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SAWRPCRSCRTPRGRRPGPEIPG*GRAVLL
Trigger: GAGAAGGACAGCTCTTCCCCACCCTGGGATCTCAGG...GCCAGGACGCCTTCCCCGAGGTGTACGACAAGATCTGCAAGGCCGCCAGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCACAGGGCACTCCGAGTaGACTCAGTGGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GGDGRATPAYPLHHSSHGTGHSE*TQWWLG
Trigger: CCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGT...GCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTTTTGGCGGCCCCACAGCCATaGGGACATGTCTTCCAGACA +
Preference number: 4 (lower is better)
Translates to: APAAEQRGPTPTKTKWVLAAPQP*GHVFQT
Trigger: TGTCTGGAAGACATGTCCCCATGGCTGTGGGGCCGC...CAAAACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR CAA 72 bp CCCCGCACTGGCTCGAAACGCAGCTTGACGTACTTCTaGGCAGGGATGATGCGGATCTCAGCGGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: PRTGSKRSLTYF*AGMMRISAATR
Trigger: CCTGGTGGCCGCTGAGATCCGCATCATCCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGCCAGTGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTGCTGTCCTTCTCCTGTaGGGACCTCGTCTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: SCEDLVWLMEAMAGQLQRAVLLL*GPRLAD
Trigger: ATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGC...ACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTTTTGGTGAGCCAAGAAGAATaGGCCCAGGTCCCCTGGATC +
Preference number: 4 (lower is better)
Translates to: APAAEQRGPTPTKTKWVLVSQEE*AQVPWI
Trigger: GATCCAGGGGACCTGGGCTCATTCTTCTTGGCTCAC...CAAAACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCGGCCTGCAGGGTTGGTaGGCCAAGAAGAATGAGCCC +
Preference number: 4 (lower is better)
Translates to: LVWLMEAMAGQLQRIPFIGLQGW*AKKNEP
Trigger: GGGCTCATTCTTCTTGGCTCACCAACCCTGCAGGCC...GATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCCTGCTAAGACACTGGGGCCTGCAGGGTTGGTaGGCCAAGAAGAATGAGCCC +
Preference number: 4 (lower is better)
Translates to: PSECLDAPSPHKTLLRHWGLQGW*AKKNEP
Trigger: GGGCTCATTCTTCTTGGCTCACCAACCCTGCAGGCC...CCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCCTCCACTTTCCCACCTaGTGCTGTCCACTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LVWLMEAMAGQLQRIPFILHFPT*CCPLPS
Trigger: GCTGGGGAGTGGACAGCATCAGGTGGGAAAGTGGAG...GATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCCTCCACTTTCCCACCTaGTGCTGTCCACTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GGDGRATPAYPLHHSSHGLHFPT*CCPLPS
Trigger: GCTGGGGAGTGGACAGCATCAGGTGGGAAAGTGGAG...GCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCTCACAGCTTACCTCCTaGCCCAGAGGCTGCCACAGC +
Preference number: 4 (lower is better)
Translates to: LVWLMEAMAGQLQRIPFISQLTS*PRGCHS
Trigger: GCTGTGGCAGCCTCTGGGTCAGGAGGTAAGCTGTGA...GATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR GCA 90 bp CGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGATGTCCCGCACGCGCTaGTCGTGCAGGCGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: RHNHDWLSSLNSSFPYMTMSRTR*SCRRGA
Trigger: CGCTCCGCGCCTGCACGAGCAGCGCGTGCGGGACAT...CGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ATCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCACGAAGTGGTTCTCCTaGCGCTGGGACTCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: ILSYTSGKASWQPSFSRSTKWFS*RWDSWV
Trigger: CACCCACGAGTCCCAGCGGCAGGAGAACCACTTCGT...GCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGAGGTGTACGACAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACACCGGAGCTCCCAGAAGATaGTGCGCGTGTGGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: TLLRHWQCAKPWVGWVNTGAPRR*CACGGG
Trigger: ACCACCGCCACACGCGCAGCATCTTCTGGGAGCTCC...GGTGTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CTCCAGCTGCCTCATGCAGGACCTGGCTTCAAAGTGTTTCACACGCGGCTCCCCTGCACCACGTGGTGCTaGTCGTACAGCTTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LQLPHAGPGFKVFHTRLPCTTWC*SYSLRR
Trigger: CCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCA...GGGGAGCCGCGTGTGAAACACTTTGAAGCCAGGTCCTGCATGAGGCAGCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACCAGCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGGTCTCATCCTGCACCACGTGGTaGTGCTCGTACAGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: TSMSCTTWCCSYSLRRVSSCTTW*CSYSLR
Trigger: GCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGA...TGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ATGGGTAGGGTGGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGGTGTGCAGGGCCTaGTGCAGGCACTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: MGRVVPLPSECLDAPSPHKVCRA*CRHFMG
Trigger: GCCCATGAAGTGCCTGCAGCAGGCCCTGCACACCTT...GTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCACGGGCTCCAGCTCAGTaGCTGGCGGCCTTGCAGATC +
Preference number: 4 (lower is better)
Translates to: EGLKPRSPDSHATTMTGSRAPAQ*LAALQI
Trigger: GATCTGCAAGGCCGCCAGGCACTGAGCTGGAGCCCG...TGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGTGACCCGGGCTCCAGCTCAGTaGCTGGCGGCCTTGCAGATC +
Preference number: 4 (lower is better)
Translates to: ATPAYPLHHSSHGCAQVTRAPAQ*LAALQI
Trigger: GATCTGCAAGGCCGCCAGGCACTGAGCTGGAGCCCG...GGTCACCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GTGCCTGGCGGCCTTGCAGATCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCAGGGAAAGATGAGGCCTaGAGGGTTGGTGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: VPGGLADLVVHLGEGVLAGKDEA*RVGEPR
Trigger: TCTTGGCTCACCAACCCTGCAGGCCTCATCTTTCCC...TGCCAGGACGCCTTCCCCGAGGTGTACGACAAGATCTGCAAGGCCGCCAGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AATGCCTTCTCCAGGAACACAGGGCACTCCGAGTGGACTCAGTGGTGGCTGGGGCCTTTGCCTTCTGAGTaGCTGGATGCCCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: NAFSRNTGHSEWTQWWLGPLPSE*LDAPSP
Trigger: AGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGG...CCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGTGTTCCTGGAGAAGGCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACGGCACCAAGGATGGCAGGGAGAACTTTGGCCTCGGACCTGGCTTTGGCACAGCCTTTGCCTTCTGAGTaGCTGGATGCCCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: TAPRMAGRTLASDLALAQPLPSE*LDAPSP
Trigger: AGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGG...CTGTGCCAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCATCCTTGGTGCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CTGCTGCAGGCACTTCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTGCTCTGGGCCACTCACCCATaGACGCTGCGGACAAACTTC +
Preference number: 4 (lower is better)
Translates to: LLQALHGHQHVLHHVVLLWATHP*TLRTNF
Trigger: GAAGTTTGTCCGCAGCGTGCATGGGTGAGTGGCCCA...GAGCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR CCA 90 bp CCCAGCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTAGAGGTAGCGGAAGATaGGGTTGTTGCCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: PSPCCRAARTHSHQDKVGRGSGR*GCCQRG
Trigger: TCCCCTTTGGCAACAACCCCATCTTCCGCTACCTCT...ACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ATCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCTGCACTAGGCCTGGCTaGCTGGGCAGGATGAACGGA +
Preference number: 4 (lower is better)
Translates to: ILSYTSGKASWQPSFSRSCTRPG*LGRMNG
Trigger: TCCGTTCATCCTGCCCAGCCAGCCAGGCCTAGTGCA...GCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGAGGTGTACGACAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGTGGGGAAGAGCTGTCCTTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGTCGGCATACAGCATCTaGAAGCCATGCACGCTGCGG +
Preference number: 4 (lower is better)
Translates to: GGEELSFSCEDLVWLMEASAYSI*KPCTLR
Trigger: CCGCAGCGTGCATGGCTTCCAGATGCTGTATGCCGA...CGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGCTCTTCCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
CDS-3UTR CCA 90 bp GCACCAGCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGGTCTGTTGGGCTGTCAGGGTaGGAGTTCTGGAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: APACPAPRGAARTACAGSVGLSG*EFWRGF
Trigger: GAAACCCCTCCAGAACTCCCACCCTGACAGCCCAAC...AGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGGAAGATGCCTGACCACTCACACGTGTCTGTCTCTCCAGGCGGGCTCCAGCTCGGAGGAAGGTGGTGTTaGGCTGTCAGGGTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: GKMPDHSHVSVSPGGLQLGGRWC*AVRVGV
Trigger: AACTCCCACCCTGACAGCCCAACACCACCTTCCTCC...GAGCTGGAGCCCGCCTGGAGAGACAGACACGTGTGAGTGGTCAGGCATCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GCCTGCTGCAGGCACTTCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTGCACCCTGCTAAGACACTaGCAGTGTGCCAAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: ACCRHFMGTSMSCTTWCCTLLRH*QCAKPW
Trigger: CCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGT...GCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACGGCACCAAGGATGGCAGGGAGAACTTTGGCCTCGGACCTGGCTTTGGCACAGTGGCCACCGTCCCAGTaGCTTAGGGTTGGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: TAPRMAGRTLASDLALAQWPPSQ*LRVGGF
Trigger: GAAGCCTCCAACCCTAAGCCACTGGGACGGTGGCCA...CTGTGCCAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCATCCTTGGTGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTCCAGCTGCCTCATGCAGGACCTGGCTTCAAAGTGTTTCACACGCGGCTCCCCTGGCCACCGTCCCAGTaGCTTAGGGTTGGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LQLPHAGPGFKVFHTRLPWPPSQ*LRVGGF
Trigger: GAAGCCTCCAACCCTAAGCCACTGGGACGGTGGCCA...GGGGAGCCGCGTGTGAAACACTTTGAAGCCAGGTCCTGCATGAGGCAGCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCCAGCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTAAACCATCACATGGATaGCCAGGGACAGGACTGGCT +
Preference number: 4 (lower is better)
Translates to: PSPCCRAARTHSHQDKVGKPSHG*PGTGLA
Trigger: AGCCAGTCCTGTCCCTGGCCATCCATGTGATGGTTT...ACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCGCGGCCCCACAGCCATaGGGACATGTCTTCCAGACA +
Preference number: 4 (lower is better)
Translates to: LVWLMEAMAGQLQRIPFIAAPQP*GHVFQT
Trigger: TGTCTGGAAGACATGTCCCCATGGCTGTGGGGCCGC...GATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGCTGAACGGGAAGCAACAAGACACGTAGTGAGACAGTaGGCCAGCCAGGGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: WSLFRLHCRCDAEREATRHVVRQ*ASQGAP
Trigger: CGGGGCGCCCTGGCTGGCTCACTGTCTCACTACGTG...TCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCCTGCTAAGACACTGGGCTGTCCTTCTCCTGTaGGGACCTCGTCTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: PSECLDAPSPHKTLLRHWAVLLL*GPRLAD
Trigger: ATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGC...CCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TCGGGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCTTGTGGTACAAGGAGGCTGTCCTTCTCCTGTaGGGACCTCGTCTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: SGKASWQPSFSRSLWYKEAVLLL*GPRLAD
Trigger: ATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGC...CTCCTTGTACCACAAGCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GCCTCCAGGCCCCGCACTGGCTCGAAACGCAGCTTGACGTACTTCTTGGCAGGGCTTGGGTGGGATGGGTaGACACCCTTCAATGACTCT +
Preference number: 4 (lower is better)
Translates to: ASRPRTGSKRSLTYFLAGLGWDG*TPFNDS
Trigger: AGAGTCATTGAAGGGTGTTCACCCATCCCACCCAAG...CCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGCCAGTGCGGGGCCTGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGCAGTTCCGCACGCGCTGCTCGTaGAGGCGCGGAGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: YMTQFLLRFGFSAEAGQFRTRCS*RRGALL
Trigger: CAGCAGCGCTCCGCGCCTGCACGAGCAGCGCGTGCG...GAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GTGGGAGTTCTGGAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCACGCACGCGCTGCTCGTaGAGGCGCGGAGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VGVLEGFLFESVDLGKQPRTRCS*RRGALL
Trigger: CAGCAGCGCTCCGCGCCTGCACGAGCAGCGCGTGCG...TGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCCAGAACTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGCTGAAATGTCCCGCACGCGCTaGTCGTGCAGGCGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: TGDLMWSLFRLHCRCDAEMSRTR*SCRRGA
Trigger: CGCTCCGCGCCTGCACGAGCAGCGCGTGCGGGACAT...TTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGTTCCATTCCCGCACCTaGTTCTGGATGTCCCGCACG +
Preference number: 4 (lower is better)
Translates to: FSCEDLVWLMEAMAGQLQFHSRT*FWMSRT
Trigger: CGTGCGGGACATCCAGAAGCAGGTGCGGGAATGGAA...CTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCTTTCCATTCCCGCACCTaGTTCTGGATGTCCCGCACG +
Preference number: 4 (lower is better)
Translates to: SCRTPRGRRPGNPASLAAFHSRT*FWMSRT
Trigger: CGTGCGGGACATCCAGAAGCAGGTGCGGGAATGGAA...AGCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGAGGTGTACGACAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GCCTGCTGCAGGCACTTCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTGCCCAGCTCGTAAGCAGTaGAGATGTGTTGGAACAGGC +
Preference number: 4 (lower is better)
Translates to: ACCRHFMGTSMSCTTWCCPARKQ*RCVGTG
Trigger: GCCTGTTCCAACACATCTGCACTGCTTACGAGCTGG...GCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCCAGCTTGCTGGGCTCTaGCTCATCTGTCATGACCCC +
Preference number: 4 (lower is better)
Translates to: LVWLMEAMAGQLQRIPFIQLAGL*LICHDP
Trigger: GGGGTCATGACAGATGAGGCAGAGCCCAGCAAGCTG...GATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTGGAAGCCATGCACGCTaGGGACAAACTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SCEDLVWLMEAMAGQLQRGSHAR*GQTSPA
Trigger: AGCTGGAGAAGTTTGTCCGCAGCGTGCATGGCTTCC...ACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
CDS-3UTR GCA 90 bp GGTGGGGAAGAGCTGTCCTTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGGGAAGCCATGCACGCTaGGGACAAACTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GGEELSFSCEDLVWLMEAGSHAR*GQTSPA
Trigger: AGCTGGAGAAGTTTGTCCGCAGCGTGCATGGCTTCC...CGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGCTCTTCCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
CDS-3UTR GCA 90 bp CCTGACTCACACGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCTCCCCACTCCGTGGCTaGCCTCCTGAGATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PDSHATTMTGSAPLIPASSPLRG*PPEIPG
Trigger: CCCTGGGATCTCAGGAGGGCAGCCACGGAGTGGGGA...GGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGCTGAACTCCCCAGCCCCTGCTaGAGAGCAGCGCGGACCCAC +
Preference number: 4 (lower is better)
Translates to: TGDLMWSLFRLHCRCDAELPSPC*RAARTH
Trigger: GTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGGGAG...TTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACACCCCTTTGCCTTCTGAGTaGCTGGATGCCCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: TLLRHWQCAKPWVGWVNTPLPSE*LDAPSP
Trigger: AGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGG...GGTGTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ATACTCTGGGCCACTCACCCATGCACGCTGCGGACAAACTTCTCCAGCTGCCTCCCTTTGCCTTCTGAGTaGCTGGATGCCCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: ILWATHPCTLRTNFSSCLPLPSE*LDAPSP
Trigger: AGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGG...GAGGCAGCTGGAGAAGTTTGTCCGCAGCGTGCATGGGTGAGTGGCCCAGAGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR GCA 90 bp GCCTGCTGCAGGCACTTCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTGCGTAGGGTGGTTCCTTTaGCTTCTGAGTGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: ACCRHFMGTSMSCTTWCCVGWFL*LLSAWM
Trigger: CATCCAGGCACTCAGAAGGCAAAGGAACCACCCTAC...GCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTCTCACCCATGCACGCTaGGGACAAACTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SCEDLVWLMEAMAGQLQRLTHAR*GQTSPA
Trigger: AGCTGGAGAAGTTTGTCCGCAGCGTGCATGGGTGAG...ACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR GCA 90 bp GCCTGCTGCAGGCACTTCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTGCACAGCATCTGGAAGCTaGAGAGGCAGAGAAGTGGGT +
Preference number: 4 (lower is better)
Translates to: ACCRHFMGTSMSCTTWCCTASGS*RGREVG
Trigger: ACCCACTTCTCTGCCTCTGCAGCTTCCAGATGCTGT...GCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR CCA 90 bp ACCAGCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGGTCTCAACGAACACCCAGCGCTaGTGGATGAGCACGAACTCC +
Preference number: 4 (lower is better)
Translates to: TSMSCTTWCCSYSLRRVSTNTQR*WMSTNS
Trigger: GGAGTTCGTGCTCATCCACCAGCGCTGGGTGTTCGT...TGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCAGCAGGGCAGTCACCTaGCCCATGGTCACCAAGGGC +
Preference number: 4 (lower is better)
Translates to: REGLKPRSPDSHATTMTGSRAVT*PMVTKG
Trigger: GCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCT...GCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGGGTGGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCGGAGAGTCCAGCCAATaGAGGTCAGCAGGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: RVVPLPSECLDAPSPHKTGESSQ*RSAGQS
Trigger: TGACTGCCCTGCTGACCTCCATTGGCTGGACTCTCC...GGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACGGCACCAAGGATGGCAGGGAGAACTTTGGCCTCGGACCTGGCTTTGGCACAGGGAGAGTCCAGCCAATaGAGGTCAGCAGGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: TAPRMAGRTLASDLALAQGESSQ*RSAGQS
Trigger: TGACTGCCCTGCTGACCTCCATTGGCTGGACTCTCC...CTGTGCCAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCATCCTTGGTGCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AATGCCTTCTCCAGGAACACAGGGCACTCCGAGTGGACTCAGTGGTGGCTGGGGTGGTTCTCCTGCCGCTaGGACTCGTGGGTGAACTTG +
Preference number: 4 (lower is better)
Translates to: NAFSRNTGHSEWTQWWLGWFSCR*DSWVNL
Trigger: CAAGTTCACCCACGAGTCCCAGCGGCAGGAGAACCA...CCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGTGTTCCTGGAGAAGGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCCCCTGGATCCAATTCAGAGCGGAGACCACTCTCTCCACCTAGGTGTCCCAGGAGCCCTTCCACGAAGTaGTTCTCCTGCCGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SPGSNSERRPLSPPRCPRSPSTK*FSCRWD
Trigger: GTCCCAGCGGCAGGAGAACCACTTCGTGGAAGGGCT...CCTGGGACACCTAGGTGGAGAGAGTGGTCTCCGCTCTGAATTGGATCCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCTTGTGAGGACCTCGTCTaGCTGATGGAGGCGATGGCA +
Preference number: 4 (lower is better)
Translates to: SCRTPRGRRPGNPASLAACEDLV*LMEAMA
Trigger: TGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACA...AGCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGAGGTGTACGACAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCCTTTGGCCTCGGACCTaGCTTTGGCACAGCGCATCT +
Preference number: 4 (lower is better)
Translates to: GGDGRATPAYPLHHSSHGLWPRT*LWHSAS
Trigger: AGATGCGCTGTGCCAAAGCCAGGTCCGAGGCCAAAG...GCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGGCAGGGAGAACTTTaGCCTCGGACCTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: GGDGRATPAYPLHHSSHGWQGEL*PRTWLW
Trigger: CCAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCA...GCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCTGACTCACACGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCGAGTGGACTCAGTGGTaGCTGGGGTGGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PDSHATTMTGSAPLIPASEWTQW*LGWACR
Trigger: CCTGCAGGCCCACCCCAGCCACCACTGAGTCCACTC...GGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GCCTGCTGCAGGCACTTCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTGCCGCCACAACCATGACTaGCTCAGCTCCCTTAATTCC +
Preference number: 4 (lower is better)
Translates to: ACCRHFMGTSMSCTTWCCRHNHD*LSSLNS
Trigger: GGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG...GCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCAGTGTGCCAAGCCTTaGGTGGGATGGGTGAACACC +
Preference number: 4 (lower is better)
Translates to: FSCEDLVWLMEAMAGQLQQCAKP*VGWVNT
Trigger: GGTGTTCACCCATCCCACCCAAGGCTTGGCACACTG...CTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGATCCAATTCAGAGCGGAGACCACTCTCTCCACCTAGGTGTCCCAGGCTGAGGTGCCTTCTGAGTGCCTaGATGCCCCCAGCCCTCACA +
Preference number: 4 (lower is better)
Translates to: GSNSERRPLSPPRCPRLRCLLSA*MPPALT
Trigger: TGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCA...CCTCAGCCTGGGACACCTAGGTGGAGAGAGTGGTCTCCGCTCTGAATTGGATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTTCAGGAGGGAGATCTTGGGAGGCACCATCCAGCCAAAGAGGTAGCGGAAGATGGCGACAGAGGCTGCTaGCATCTCTGGCCACCGTCC +
Preference number: 4 (lower is better)
Translates to: LQEGDLGRHHPAKEVAEDGDRGC*HLWPPS
Trigger: GGACGGTGGCCAGAGATGCCAGCAGCCTCTGTCGCC...ATCTTCCGCTACCTCTTTGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACACCGCGGCCCCACAGCCATaGGGACATGTCTTCCAGACA +
Preference number: 4 (lower is better)
Translates to: TLLRHWQCAKPWVGWVNTAAPQP*GHVFQT
Trigger: TGTCTGGAAGACATGTCCCCATGGCTGTGGGGCCGC...GGTGTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCCCAGCGCTGGTGGATaGGCACGAACTCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: RHNHDWLSSLNSSFPYMTPSAGG*ARTPAP
Trigger: AGGGGCTGGAGTTCGTGCTCATCCACCAGCGCTGGG...CGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AGTAGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTCCCAGCGCTGGTGGATaGGCACGAACTCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SREGLKPRSPDSHATTMTPSAGG*ARTPAP
Trigger: AGGGGCTGGAGTTCGTGCTCATCCACCAGCGCTGGG...AGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TGCAGCTCAGAGGACAATGACTTGCCCACGTTGCACAGCTCGCTGACAGTAGAGGGCGCCCCGTGCACATaGAGGTCTTGCTACCCTGCT +
Preference number: 4 (lower is better)
Translates to: CSSEDNDLPTLHSSLTVEGAPCT*RSCYPA
Trigger: AGCAGGGTAGCAAGACCTTCATGTGCACGGGGCGCC...CTCTACTGTCAGCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGAGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AATGCCTTCTCCAGGAACACAGGGCACTCCGAGTGGACTCAGTGGTGGCTGGGGGCTCGAAACGCAGCTTaGCGTACTTCTTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: NAFSRNTGHSEWTQWWLGARNAA*RTSWQG
Trigger: TCCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGC...CCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGTGTTCCTGGAGAAGGCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GCCTGCTGCAGGCACTTCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTGCATGGCTGTGCACAGGTaGCCTAATGTGGAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: ACCRHFMGTSMSCTTWCCMAVHR*PNVEPF
Trigger: AAAAGGCTCCACATTAGGTCACCTGTGCACAGCCAT...GCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GCACCAGCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGGTCTCTTGGGTGGGATGGGTaGACACCCTTCAATGACTCT +
Preference number: 4 (lower is better)
Translates to: APACPAPRGAARTACAGSLGWDG*TPFNDS
Trigger: AGAGTCATTGAAGGGTGTTCACCCATCCCACCCAAG...AGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACGGTTCCTTTGCCTTCTaGGTGCCTGGATGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: KTLLRHWQCAKPWVGWVNGSFAF*VPGCPQ
Trigger: CTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACC...GTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACACCTTCCATTCCCGCACCTaGTTCTGGATGTCCCGCACG +
Preference number: 4 (lower is better)
Translates to: TLLRHWQCAKPWVGWVNTFHSRT*FWMSRT
Trigger: CGTGCGGGACATCCAGAAGCAGGTGCGGGAATGGAA...GGTGTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ATGGGTAGGGTGGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGGTCTTGCTACCCTaGTCCTTCCATTCCCGCACC +
Preference number: 4 (lower is better)
Translates to: MGRVVPLPSECLDAPSPHKVLLP*SFHSRT
Trigger: GGTGCGGGAATGGAAGGAGCAGGGTAGCAAGACCTT...GTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACGGCACCAAGGATGGCAGGGAGAACTTTGGCCTCGGACCTGGCTTTGGCACAGAAGGTCTTGCTACCCTaGTCCTTCCATTCCCGCACC +
Preference number: 4 (lower is better)
Translates to: TAPRMAGRTLASDLALAQKVLLP*SFHSRT
Trigger: GGTGCGGGAATGGAAGGAGCAGGGTAGCAAGACCTT...CTGTGCCAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCATCCTTGGTGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAACGAAGTGGTTCTCCTaGCGCTGGGACTCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: EGLKPRSPDSHATTMTGSTKWFS*RWDSWV
Trigger: CACCCACGAGTCCCAGCGGCAGGAGAACCACTTCGT...TGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TGCAGCTCAGAGGACAATGACTTGCCCACGTTGCACAGCTCGCTGACAGTAGAGGGAGCTCCCAGAAGATaGTGCGCGTGTGGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: CSSEDNDLPTLHSSLTVEGAPRR*CACGGG
Trigger: ACCACCGCCACACGCGCAGCATCTTCTGGGAGCTCC...CTCTACTGTCAGCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGAGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TGCAGCTCAGAGGACAATGACTTGCCCACGTTGCACAGCTCGCTGACAGTAGAGGGCACCAGCATGTCCTaGACCACGTGGTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: CSSEDNDLPTLHSSLTVEGTSMS*TTWCCS
Trigger: CGAGCAGCACCACGTGGTGCAGGACATGCTGGTGCC...CTCTACTGTCAGCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGAGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GCATACAGCATCTGGAAGCCATGCACGCTGCGGACAAACTTCTCCAGCTGCCTCAAGGTGTGCAGGGCCTaGTGCAGGCACTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: AYSIWKPCTLRTNFSSCLKVCRA*CRHFMG
Trigger: GCCCATGAAGTGCCTGCAGCAGGCCCTGCACACCTT...GAGGCAGCTGGAGAAGTTTGTCCGCAGCGTGCATGGCTTCCAGATGCTGTATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000648728.1
CDS-3UTR GCA 90 bp GGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCAGTGCCTGGCGGCCTTaGAGATCTTGTCGTACACCT +
Preference number: 4 (lower is better)
Translates to: GGDGRATPAYPLHHSSHGSAWRP*RSCRTP
Trigger: AGGTGTACGACAAGATCTGCAAGGCCGCCAGGCACT...GCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCGGGCTCCAGCTCAGTaGCTGGCGGCCTTGCAGATC +
Preference number: 4 (lower is better)
Translates to: RHNHDWLSSLNSSFPYMTRAPAQ*LAALQI
Trigger: GATCTGCAAGGCCGCCAGGCACTGAGCTGGAGCCCG...CGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TGCAGCTCAGAGGACAATGACTTGCCCACGTTGCACAGCTCGCTGACAGTAGAGTCCATTCCACTGGGCTaGCCCCTGGAAGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: CSSEDNDLPTLHSSLTVESIPLG*PLEARR
Trigger: CCTCCTGGCTTCCAGGGGGCAGCCCAGTGGAATGGA...CTCTACTGTCAGCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGAGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTTTTGCTTTTCAGGCTCCACTaGAGATGTGACGCTGAACGG +
Preference number: 4 (lower is better)
Translates to: APAAEQRGPTPTKTKWVLLFRLH*RCDAER
Trigger: CCGTTCAGCGTCACATCTGCAGTGGAGCCTGAAAAG...CAAAACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GCCCTCTGCCATCCCCAGGCAACTACTGATGCGCTATCAGTATGGATTCATGTGTCCCCACTCCGTGGCTaGCCTCCTGAGATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: ALCHPQATTDALSVWIHVSPLRG*PPEIPG
Trigger: CCCTGGGATCTCAGGAGGGCAGCCACGGAGTGGGGA...CACATGAATCCATACTGATAGCGCATCAGTAGTTGCCTGGGGATGGCAGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR GCA 90 bp GGAAGCAACAAGAGCTACCACTTACCCAGCACCTTCAATGTGACCAGTGCTCAACCACTCCCCAGCCCCTaGTGCAGAGCAGCGCGGACC +
Preference number: 4 (lower is better)
Translates to: GSNKSYHLPSTFNVTSAQPLPSP*CRAART
Trigger: GGTCCGCGCTGCTCTGCAGCAGGGGCTGGGGAGTGG...TTGAGCACTGGTCACATTGAAGGTGCTGGGTAAGTGGTAGCTCTTGTTGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GGTGGGGAAGAGCTGTCCTTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGGACAGGGAAGATTCATaGCTTTCTCCTTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GGEELSFSCEDLVWLMEADREDS*LSPWPP
Trigger: TGGGGGCCAAGGAGAAAGGCATGAATCTTCCCTGTC...CGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGCTCTTCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGTGACCAGACTGCTGGGCTTCTaGCCCTCTGCTTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: ATPAYPLHHSSHGCAQVTRLLGF*PSAWPE
Trigger: CTCTGGCCAAGCAGAGGGGCAGAAGCCCAGCAGTCT...GGTCACCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR CCA 90 bp CACCAAGACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCATCCCGCACCTGCTTCTaGATGTCCCGCACGCGCTGC +
Preference number: 4 (lower is better)
Translates to: HQDKVGFGKDEACRVGEPSRTCF*MSRTRC
Trigger: GCAGCGCGTGCGGGACATCCAGAAGCAGGTGCGGGA...TGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTGTGCACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACTCCCGCACCTGCTTCTaGATGTCCCGCACGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LCTGDLMWSLFRLHCRCDSRTCF*MSRTRC
Trigger: GCAGCGCGTGCGGGACATCCAGAAGCAGGTGCGGGA...GTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGTGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACCAGCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGGTCTCATCAGGAGGGAGATCTTaGGAGGCACCATCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: TSMSCTTWCCSYSLRRVSSGGRS*EAPSSQ
Trigger: TTGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGA...TGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATGTCCTGCACCACGTaGTGCTGCTCGTACAGCTTG +
Preference number: 4 (lower is better)
Translates to: LVWLMEAMAGQLQRIPFIMSCTT*CCSYSL
Trigger: CAAGCTGTACGAGCAGCACCACGTGGTGCAGGACAT...GATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCGGGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCTTGTGGTACAAGGAGATGTCCTGCACCACGTaGTGCTGCTCGTACAGCTTG +
Preference number: 4 (lower is better)
Translates to: SGKASWQPSFSRSLWYKEMSCTT*CCSYSL
Trigger: CAAGCTGTACGAGCAGCACCACGTGGTGCAGGACAT...CTCCTTGTACCACAAGCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGGGTGGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCACGTGGATGTCGTTTTaGAAGGTGTGCAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RVVPLPSECLDAPSPHKTTWMSF*KVCRAC
Trigger: GCAGGCCCTGCACACCTTCCAAAACGACATCCACGT...GGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAACGTGGATGTCGTTTTaGAAGGTGTGCAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SWAPACPAPRGAARTACATWMSF*KVCRAC
Trigger: GCAGGCCCTGCACACCTTCCAAAACGACATCCACGT...TGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCACGTGGATGTCGTTTTaGAAGGTGTGCAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GGDGRATPAYPLHHSSHGTWMSF*KVCRAC
Trigger: GCAGGCCCTGCACACCTTCCAAAACGACATCCACGT...GCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTTGCACTAGGCCTGGCTaGCTGGGCAGGATGAACGGA +
Preference number: 4 (lower is better)
Translates to: GLKPRSPDSHATTMTGSACTRPG*LGRMNG
Trigger: TCCGTTCATCCTGCCCAGCCAGCCAGGCCTAGTGCA...AGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTGCACTAGGCCTGGCTaGCTGGGCAGGATGAACGGA +
Preference number: 4 (lower is better)
Translates to: REGLKPRSPDSHATTMTGCTRPG*LGRMNG
Trigger: TCCGTTCATCCTGCCCAGCCAGCCAGGCCTAGTGCA...GCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTTCAGGAGGGAGATCTTGGGAGGCACCATCCAGCCAAAGAGGTAGCGGAAGATTCGGGGAAGGCGTCCTaGCAACCCAGCTTCTCTCGC +
Preference number: 4 (lower is better)
Translates to: LQEGDLGRHHPAKEVAEDSGKAS*QPSFSR
Trigger: GCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGA...ATCTTCCGCTACCTCTTTGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGGTTGGGCTGTCAGGGTaGGAGTTCTGGAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: AGQLQRIPFIIPAMAVHRVGLSG*EFWRGF
Trigger: GAAACCCCTCCAGAACTCCCACCCTGACAGCCCAAC...CCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCCTGCTAAGACACTGGTTCTTTCCATTCCACTaGGCTGCCCCCTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PSECLDAPSPHKTLLRHWFFPFH*AAPWKP
Trigger: TGGCTTCCAGGGGGCAGCCCAGTGGAATGGAAAGAA...CCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGCTGAACGGGAAGCAACAAGATTGGCACAGCGCATCTaGGGCCTCCCCACTCCGTGG +
Preference number: 4 (lower is better)
Translates to: WSLFRLHCRCDAEREATRLAQRI*GLPTPW
Trigger: CCACGGAGTGGGGAGGCCCCAGATGCGCTGTGCCAA...TCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGTAGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTCCTCGGACCTGGCTTTaGCACAGCGCATCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SREGLKPRSPDSHATTMTPRTWL*HSASGA
Trigger: GGCCCCAGATGCGCTGTGCCAAAGCCAGGTCCGAGG...AGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCACCTCGGACCTGGCTTTaGCACAGCGCATCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: HCRCDAEREATRATTYPAPRTWL*HSASGA
Trigger: GGCCCCAGATGCGCTGTGCCAAAGCCAGGTCCGAGG...TGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CGTCCCAGTGGCTTAGGGTTGGAGGCTTCACTGGCAAAACAATGGCACTGTTTAGGACTCAGTGGTGGCTaGGGTGGGCCTGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: RPSGLGLEASLAKQWHCLGLSGG*GGPAGP
Trigger: TGGGCCTGCAGGCCCACCCCAGCCACCACTGAGTCC...TAAACAGTGCCATTGTTTTGCCAGTGAAGCCTCCAACCCTAAGCCACTGGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTCCCTTAATTGAGTGGACTCAGTGGTaGCTGGGGTGGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PRSPDSHATTMTGSAPLIEWTQW*LGWACR
Trigger: CCTGCAGGCCCACCCCAGCCACCACTGAGTCCACTC...AATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGTCGGCATACAGCATCTGGAAGCCATGCACGCTGCGGACAAACTTCTCCAGCTACAGGGCACTCCGAGTaGACTCAGTGGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SRHTASGSHARCGQTSPATGHSE*TQWWLG
Trigger: CCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGT...AGCTGGAGAAGTTTGTCCGCAGCGTGCATGGCTTCCAGATGCTGTATGCCGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000648728.1
CDS-3UTR CCA 90 bp ACCAGCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGGTCTCAACCCTGCTAAGACACTaGCAGTGTGCCAAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: TSMSCTTWCCSYSLRRVSTLLRH*QCAKPW
Trigger: CCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGT...TGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACTGCCTTCTGAGTGCCTaGATGCCCCCAGCCCTCACA +
Preference number: 4 (lower is better)
Translates to: KTLLRHWQCAKPWVGWVNCLLSA*MPPALT
Trigger: TGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCA...GTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCCTCCAGAGGCCAAATaGGTAGGGTGGTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: FSCEDLVWLMEAMAGQLQPPEAK*VGWFLC
Trigger: GCAAAGGAACCACCCTACCCATTTGGCCTCTGGAGG...CTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTCCCTTAATTGGCGACAGAGGCTGCTaGCATCTCTGGCCACCGTCC +
Preference number: 4 (lower is better)
Translates to: PRSPDSHATTMTGSAPLIGDRGC*HLWPPS
Trigger: GGACGGTGGCCAGAGATGCCAGCAGCCTCTGTCGCC...AATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTAAACCATCACATGGATaGCCAGGGACAGGACTGGCT +
Preference number: 4 (lower is better)
Translates to: SCEDLVWLMEAMAGQLQRKPSHG*PGTGLA
Trigger: AGCCAGTCCTGTCCCTGGCCATCCATGTGATGGTTT...ACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CTGTGCACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGGCGCCCCGTGCACATaGAGGTCTTGCTACCCTGCT +
Preference number: 4 (lower is better)
Translates to: LCTGDLMWSLFRLHCRCDGAPCT*RSCYPA
Trigger: AGCAGGGTAGCAAGACCTTCATGTGCACGGGGCGCC...GTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGTGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCAGGCGCCCCGTGCACATaGAGGTCTTGCTACCCTGCT +
Preference number: 4 (lower is better)
Translates to: HCRCDAEREATRATTYPAGAPCT*RSCYPA
Trigger: AGCAGGGTAGCAAGACCTTCATGTGCACGGGGCGCC...TGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp ACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCACGGCGCCCCGTGCACATaGAGGTCTTGCTACCCTGCT +
Preference number: 4 (lower is better)
Translates to: TADVTLNGKQQELPLTQHGAPCT*RSCYPA
Trigger: AGCAGGGTAGCAAGACCTTCATGTGCACGGGGCGCC...GTGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCTGGCATAGAACAGGTCTaGGTTTTCGGACGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: SCRTPRGRRPGNPASLAAGIEQV*VFGRSA
Trigger: TGCACTCCGTCCGAAAACTCAGACCTGTTCTATGCC...AGCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGAGGTGTACGACAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GATGGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATACTTCTTGGCAGGGATaGTGCGGATCTCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: DGGDGRATPAYPLHHSSHTSWQG*CGSQRP
Trigger: TGGCCGCTGAGATCCGCATCATCCCTGCCAAGAAGT...ATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp ACGGCACCAAGGATGGCAGGGAGAACTTTGGCCTCGGACCTGGCTTTGGCACAGGAAAGCAGCCAAGCTTaGGTGAAGGGAAGATGCCTG +
Preference number: 4 (lower is better)
Translates to: TAPRMAGRTLASDLALAQESSQA*VKGRCL
Trigger: CAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTC...CTGTGCCAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCATCCTTGGTGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GGTGGGGAAGAGCTGTCCTTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGGGACTCAGGCTTGTCTaGCTCCAAATCCCACATTCT +
Preference number: 4 (lower is better)
Translates to: GGEELSFSCEDLVWLMEAGLRLV*LQIPHS
Trigger: AGAATGTGGGATTTGGAGTCAGACAAGCCTGAGTCC...CGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGCTCTTCCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GATGGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGCTGTCCTTCTCCTGTaGGGACCTCGTCTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: DGGDGRATPAYPLHHSSHAVLLL*GPRLAD
Trigger: ATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGC...ATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GGACCAGCTCGTAAGCAGTGCAGATGTGTTGGAACAGGCCGTACTTGTGGGATGCTCCACTTTCCCACCTaGTGCTGTCCACTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GPARKQCRCVGTGRTCGMLHFPT*CCPLPS
Trigger: GCTGGGGAGTGGACAGCATCAGGTGGGAAAGTGGAG...CATCCCACAAGTACGGCCTGTTCCAACACATCTGCACTGCTTACGAGCTGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CAGGGCCTGCTGCAGGCACTTCATGGGCACCAGCATGTCCTGCACCACGTGGTGCCAGCTTCCCTTACATaGCGCAATTCCTTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: QGLLQALHGHQHVLHHVVPASLT*RNSFSD
Trigger: ATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGG...CACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAGGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp ACCAGCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGGTCTCAACAGTAGAGAGGGGCTaGAACCTAGGTCTCCTGACT +
Preference number: 4 (lower is better)
Translates to: TSMSCTTWCCSYSLRRVSTVERG*NLGLLT
Trigger: AGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACTGT...TGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GGTGGGGAAGAGCTGTCCTTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGTTCTGGCACCTGGAATaGCAAGACAGATGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GGEELSFSCEDLVWLMEAFWHLE*QDRCFP
Trigger: AGGGAAGCATCTGTCTTGTCATTCCAGGTGCCAGAA...CGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGCTCTTCCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp ATACTATACTCTGGGCCACTCACCCATGCACGCTGCGGACAAACTTCTCCAGCTAGGCAGAGAAGTGGGTaGGGACGCCAGGAGGCACAC +
Preference number: 4 (lower is better)
Translates to: ILYSGPLTHARCGQTSPARQRSG*GRQEAH
Trigger: GTGTGCCTCCTGGCGTCCTCACCCACTTCTCTGCCT...AGCTGGAGAAGTTTGTCCGCAGCGTGCATGGGTGAGTGGCCCAGAGTATAGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR GCA 90 bp ACAAGACAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGCCGCGCGGTAAGCGCTaGGGGTTCGCGCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: TRQMLPCKPGMSLSGNEMPRGKR*GFAPPV
Trigger: GACAGGAGGCGCGAACCCGCAGCGCTTACCGCGCGG...CATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTGTCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGTGGGGAGTCGCACGCGCTGCTCGTaGAGGCGCGGAGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SELRICKALKLTTAGVGSRTRCS*RRGALL
Trigger: CAGCAGCGCTCCGCGCCTGCACGAGCAGCGCGTGCG...ACTCCCCACCCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TTGCAACCACAGTGTCTAAGACAATCAGAAGGGTTCCAGGGAGGTCTTGTCTGTATGTCCCGCACGCGCTaGTCGTGCAGGCGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: LQPQCLRQSEGFQGGLVCMSRTR*SCRRGA
Trigger: CGCTCCGCGCCTGCACGAGCAGCGCGTGCGGGACAT...ACAGACAAGACCTCCCTGGAACCCTTCTGATTGTCTTAGACACTGTGGTTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGCAGTTCTTAAGAATGTCCCGCACGCGCTaGTCGTGCAGGCGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: TQFLLRFGFSAEAGQFLRMSRTR*SCRRGA
Trigger: CGCTCCGCGCCTGCACGAGCAGCGCGTGCGGGACAT...TCTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CCTGACTCACACGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCACGAAGTGGTTCTCCTaGCGCTGGGACTCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PDSHATTMTGSAPLIPASTKWFS*RWDSWV
Trigger: CACCCACGAGTCCCAGCGGCAGGAGAACCACTTCGT...GGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GGACCAGCTCGTAAGCAGTGCAGATGTGTTGGAACAGGCCGTACTTGTGGGATGACGAAGTGGTTCTCCTaGCGCTGGGACTCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GPARKQCRCVGTGRTCGMTKWFS*RWDSWV
Trigger: CACCCACGAGTCCCAGCGGCAGGAGAACCACTTCGT...CATCCCACAAGTACGGCCTGTTCCAACACATCTGCACTGCTTACGAGCTGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGTGACCCAGCTTGCTGGGCTCTaGCTCATCTGTCATGACCCC +
Preference number: 4 (lower is better)
Translates to: ATPAYPLHHSSHGCAQVTQLAGL*LICHDP
Trigger: GGGGTCATGACAGATGAGGCAGAGCCCAGCAAGCTG...GGTCACCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTTTTGCAATGCTATTCAGCTTaGTGGGCTCTGCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: APAAEQRGPTPTKTKWVLQCYSA*WALPHL
Trigger: CAGATGAGGCAGAGCCCAGCAAGCTGAATAGCATTG...CAAAACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCAGCTGCTCGTACAGCTTaGGCAGGGTCTCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: HCRCDAEREATRATTYPAAARTA*AGSHPG
Trigger: CCCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGC...TGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CGCAGCTTGTGGTACAAGGAGCCATCAAACATCTCCCAGAACTCCTCCCGGTTCTGCACCACGTGGTGCTaGTCGTACAGCTTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: RSLWYKEPSNISQNSSRFCTTWC*SYSLRR
Trigger: CCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCA...GAACCGGGAGGAGTTCTGGGAGATGTTTGATGGCTCCTTGTACCACAAGCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCACGCGGCTCCCCATATaGTCCAATGTCGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: LVWLMEAMAGQLQRIPFITRLPI*SNVDVE
Trigger: CTCTACATCGACATTGGAGCATATGGGGAGCCGCGT...GATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAACGCGGCTCCCCATATaGTCCAATGTCGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: SWAPACPAPRGAARTACATRLPI*SNVDVE
Trigger: CTCTACATCGACATTGGAGCATATGGGGAGCCGCGT...TGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACCGGAGGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATACGGGCTCCAGCTCAGTaGCTGGCGGCCTTGCAGATC +
Preference number: 4 (lower is better)
Translates to: TGGCDSKIPSFPSPGLWIRAPAQ*LAALQI
Trigger: GATCTGCAAGGCCGCCAGGCACTGAGCTGGAGCCCG...TATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCCTCCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTGGATTTTGGTTATATGACCTCCCCAGCCCCTGCTaGAGAGCAGCGCGGACCCAC +
Preference number: 4 (lower is better)
Translates to: PSFPSPGLWIRSGFWLYDLPSPC*RAARTH
Trigger: GTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGGGAG...GTCATATAACCAAAATCCAGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGACCACTCCCCAGCCCCTaGTGCAGAGCAGCGCGGACC +
Preference number: 4 (lower is better)
Translates to: WLSSLNSSFPYMTQFLLRPLPSP*CRAART
Trigger: GGTCCGCGCTGCTCTGCAGCAGGGGCTGGGGAGTGG...TCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGCAGTTCTTAAGACCACTCCCCAGCCCCTaGTGCAGAGCAGCGCGGACC +
Preference number: 4 (lower is better)
Translates to: TQFLLRFGFSAEAGQFLRPLPSP*CRAART
Trigger: GGTCCGCGCTGCTCTGCAGCAGGGGCTGGGGAGTGG...TCTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACGGCACCAAGGATGGCAGGGAGAACTTTGGCCTCGGACCTGGCTTTGGCACAGGTAGGGTGGTTCCTTTaGCTTCTGAGTGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: TAPRMAGRTLASDLALAQVGWFL*LLSAWM
Trigger: CATCCAGGCACTCAGAAGGCAAAGGAACCACCCTAC...CTGTGCCAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCATCCTTGGTGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CTCCAGCTGCCTCATGCAGGACCTGGCTTCAAAGTGTTTCACACGCGGCTCCCCGTAGGGTGGTTCCTTTaGCTTCTGAGTGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: LQLPHAGPGFKVFHTRLPVGWFL*LLSAWM
Trigger: CATCCAGGCACTCAGAAGGCAAAGGAACCACCCTAC...GGGGAGCCGCGTGTGAAACACTTTGAAGCCAGGTCCTGCATGAGGCAGCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTAACACCCAGCGCTGGTaGATGAGCACGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLKPRSPDSHATTMTGSANTQRW*MSTNSS
Trigger: GCTGGAGTTCGTGCTCATCCACCAGCGCTGGGTGTT...AGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGTGACCAACACCCAGCGCTGGTaGATGAGCACGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: ATPAYPLHHSSHGCAQVTNTQRW*MSTNSS
Trigger: GCTGGAGTTCGTGCTCATCCACCAGCGCTGGGTGTT...GGTCACCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCACGAACACCCAGCGCTaGTGGATGAGCACGAACTCC +
Preference number: 4 (lower is better)
Translates to: REGLKPRSPDSHATTMTGTNTQR*WMSTNS
Trigger: GGAGTTCGTGCTCATCCACCAGCGCTGGGTGTTCGT...GCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ATGGGTAGGGTGGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACGCAGTGCAGATGTGTTaGAACAGGCCGTACTTGTGG +
Preference number: 4 (lower is better)
Translates to: MGRVVPLPSECLDAPSPHAVQMC*NRPYLW
Trigger: CCACAAGTACGGCCTGTTCCAACACATCTGCACTGC...GTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGTGCCGCTGGGACTCGTaGGTGAACTTGGCACAGATA +
Preference number: 4 (lower is better)
Translates to: AGQLQRIPFIIPAMAVHRCRWDS*VNLAQI
Trigger: TATCTGTGCCAAGTTCACCCACGAGTCCCAGCGGCA...CCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGTGACCTGGTTCTCCTGCCGCTaGGACTCGTGGGTGAACTTG +
Preference number: 4 (lower is better)
Translates to: ATPAYPLHHSSHGCAQVTWFSCR*DSWVNL
Trigger: CAAGTTCACCCACGAGTCCCAGCGGCAGGAGAACCA...GGTCACCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGTAGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTCGCAGGGTCTCACCCTaGGTCAGCTTCAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SREGLKPRSPDSHATTMTRRVSP*VSFRRE
Trigger: CTCCCTCCTGAAGCTGACCCAGGGTGAGACCCTGCG...AGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCGCTGCAGGCACTTCATaGGCACCAGCATGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: REGLKPRSPDSHATTMTGAAGTS*APACPA
Trigger: TGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGC...GCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCATCGGGGAAGGCGTCCTaGCAACCCAGCTTCTCTCGC +
Preference number: 4 (lower is better)
Translates to: HCRCDAEREATRATTYPASGKAS*QPSFSR
Trigger: GCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGA...TGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTCTCCAGCTCAGTGCCTaGCGGCCTTGCAGATCTTGT +
Preference number: 4 (lower is better)
Translates to: GLKPRSPDSHATTMTGSALQLSA*RPCRSC
Trigger: ACAAGATCTGCAAGGCCGCCAGGCACTGAGCTGGAG...AGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGTGACCGGAGGAAGGTGGTGTTaGGCTGTCAGGGTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: ATPAYPLHHSSHGCAQVTGGRWC*AVRVGV
Trigger: AACTCCCACCCTGACAGCCCAACACCACCTTCCTCC...GGTCACCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTCCTGAGATCCCAGGGTaGGGAAGAGCTGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: GLKPRSPDSHATTMTGSAPEIPG*GRAVLL
Trigger: GAGAAGGACAGCTCTTCCCCACCCTGGGATCTCAGG...AGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACCGGAGGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATATTGGCACAGCGCATCTaGGGCCTCCCCACTCCGTGG +
Preference number: 4 (lower is better)
Translates to: TGGCDSKIPSFPSPGLWILAQRI*GLPTPW
Trigger: CCACGGAGTGGGGAGGCCCCAGATGCGCTGTGCCAA...TATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCCTCCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACCGGAGGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATACCTCGGACCTGGCTTTaGCACAGCGCATCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: TGGCDSKIPSFPSPGLWIPRTWL*HSASGA
Trigger: GGCCCCAGATGCGCTGTGCCAAAGCCAGGTCCGAGG...TATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCCTCCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCATGGCAGGGAGAACTTTaGCCTCGGACCTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: EGLKPRSPDSHATTMTGSWQGEL*PRTWLW
Trigger: CCAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCA...TGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGGAGGTTCCCTTCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTGGACTCAGTGGTGGCTaGGGTGGGCCTGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GRFPSLWNGNGTFSELRIGLSGG*GGPAGP
Trigger: TGGGCCTGCAGGCCCACCCCAGCCACCACTGAGTCC...AATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGTCCGAGTGGACTCAGTaGTGGCTGGGGTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RDEWLEKSSRCSFLPAPRSEWTQ*WLGWAC
Trigger: GCAGGCCCACCCCAGCCACCACTGAGTCCACTCGGA...CCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATGGAACTTTCTCTACAGGGCACTCCGAGTaGACTCAGTGGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GKDLGRFPSLWNGNGTFSTGHSE*TQWWLG
Trigger: CCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGT...AGAGAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACCAGTGTGCCAAGCCTTaGGTGGGATGGGTGAACACC +
Preference number: 4 (lower is better)
Translates to: KTLLRHWQCAKPWVGWVNQCAKP*VGWVNT
Trigger: GGTGTTCACCCATCCCACCCAAGGCTTGGCACACTG...GTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTTTTGGCCAAATGGGTAGGGTaGTTCCTTTGCCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: APAAEQRGPTPTKTKWVLAKWVG*FLCLLS
Trigger: ACTCAGAAGGCAAAGGAACCACCCTACCCATTTGGC...CAAAACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CGTCCCAGTGGCTTAGGGTTGGAGGCTTCACTGGCAAAACAATGGCACTGTTTAGGCGACAGAGGCTGCTaGCATCTCTGGCCACCGTCC +
Preference number: 4 (lower is better)
Translates to: RPSGLGLEASLAKQWHCLGDRGC*HLWPPS
Trigger: GGACGGTGGCCAGAGATGCCAGCAGCCTCTGTCGCC...TAAACAGTGCCATTGTTTTGCCAGTGAAGCCTCCAACCCTAAGCCACTGGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTCCAGCTGCCTCATGCAGGACCTGGCTTCAAAGTGTTTCACACGCGGCTCCCCCCAAGCCCCGGGTTGTaGATAAGGTCTGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: LQLPHAGPGFKVFHTRLPPSPGL*IRSGFW
Trigger: CCAAAATCCAGACCTTATCCACAACCCGGGGCTTGG...GGGGAGCCGCGTGTGAAACACTTTGAAGCCAGGTCCTGCATGAGGCAGCTGGAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGGGTGGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCAGAAACTCAGGGCTCTaGAGGGGAGAGCCTTACTCT +
Preference number: 4 (lower is better)
Translates to: RVVPLPSECLDAPSPHKTRNSGL*RGEPYS
Trigger: AGAGTAAGGCTCTCCCCTCCAGAGCCCTGAGTTTCT...GGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CAGATGTGTTGGAACAGGCCGTACTTGTGGGATGATGACTCGATGCCTGTGCCCCCTGGAGCAGTACCCTaGGGCTGTCAGCTAGAGGCA +
Preference number: 4 (lower is better)
Translates to: QMCWNRPYLWDDDSMPVPPGAVP*GCQLEA
Trigger: TGCCTCTAGCTGACAGCCCCAGGGTACTGCTCCAGG...GGGCACAGGCATCGAGTCATCATCCCACAAGTACGGCCTGTTCCAACACATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR CCA 90 bp CTCCAGCTGCCTCATGCAGGACCTGGCTTCAAAGTGTTTCACACGCGGCTCCCCAGCAATCCTCTGTCCTaGGCCTCTCCGTGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: LQLPHAGPGFKVFHTRLPSNPLS*ASPWFS
Trigger: TGAAAACCACGGAGAGGCCCAGGACAGAGGATTGCT...GGGGAGCCGCGTGTGAAACACTTTGAAGCCAGGTCCTGCATGAGGCAGCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR CAA 72 bp CAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTTTaGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: QRGPTPTKTKWV*GKMRPAGLVSQ
Trigger: TTGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
3UTR CAA 72 bp ATAGCCTCCAGGCCCCGCACTGGCTCGAAACGCAGCTaGACGTACTTCTTGGCAGGGATGATGCGGATCTCA +
Preference number: 4 (lower is better)
Translates to: IASRPRTGSKRS*TYFLAGMMRIS
Trigger: TGAGATCCGCATCATCCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGCCAGTGCGGGGCCTGGAGGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCGGCGCCCCGTGCACATaGAGGTCTTGCTACCCTGCT +
Preference number: 4 (lower is better)
Translates to: NQALRYNKPGKDLGRFPSGAPCT*RSCYPA
Trigger: AGCAGGGTAGCAAGACCTTCATGTGCACGGGGCGCC...GGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACGCTCGAAACGCAGCTTaGCGTACTTCTTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: KTLLRHWQCAKPWVGWVNARNAA*RTSWQG
Trigger: TCCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGC...GTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGTGACCGCTCGAAACGCAGCTTaGCGTACTTCTTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: ATPAYPLHHSSHGCAQVTARNAA*RTSWQG
Trigger: TCCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGC...GGTCACCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TCCCCTGGATCCAATTCAGAGCGGAGACCACTCTCTCCACCTAGGTGTCCCAGGGAAAGCAGCCAAGCTTaGGTGAAGGGAAGATGCCTG +
Preference number: 4 (lower is better)
Translates to: SPGSNSERRPLSPPRCPRESSQA*VKGRCL
Trigger: CAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTC...CCTGGGACACCTAGGTGGAGAGAGTGGTCTCCGCTCTGAATTGGATCCAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CGCAGCTTGTGGTACAAGGAGCCATCAAACATCTCCCAGAACTCCTCCCGGTTCGTGAGCCAAGAAGAATaGGCCCAGGTCCCCTGGATC +
Preference number: 4 (lower is better)
Translates to: RSLWYKEPSNISQNSSRFVSQEE*AQVPWI
Trigger: GATCCAGGGGACCTGGGCTCATTCTTCTTGGCTCAC...GAACCGGGAGGAGTTCTGGGAGATGTTTGATGGCTCCTTGTACCACAAGCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGGGCCTGCAGGGTTGGTaGGCCAAGAAGAATGAGCCC +
Preference number: 4 (lower is better)
Translates to: RHNHDWLSSLNSSFPYMTGLQGW*AKKNEP
Trigger: GGGCTCATTCTTCTTGGCTCACCAACCCTGCAGGCC...CGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp ATCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCCCTGCAAGCCAGGTATaGGCCTTTCTGGAAATGAGA +
Preference number: 4 (lower is better)
Translates to: ILSYTSGKASWQPSFSRSPASQV*AFLEMR
Trigger: TCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGG...GCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGAGGTGTACGACAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GGTGGGGAAGAGCTGTCCTTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGTCATCAGTTTTGCACTaGGCAAGGAAGCACATGGGT +
Preference number: 4 (lower is better)
Translates to: GGEELSFSCEDLVWLMEASSVLH*ARKHMG
Trigger: ACCCATGTGCTTCCTTGCTCAGTGCAAAACTGATGA...CGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGCTCTTCCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GCCTGCTGCAGGCACTTCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTGCCATAACCGGAGGGTGTaGTTCCAAAATACCTTCCTT +
Preference number: 4 (lower is better)
Translates to: ACCRHFMGTSMSCTTWCCHNRRV*FQNTFL
Trigger: AAGGAAGGTATTTTGGAATCACACCCTCCGGTTATG...GCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GGATCCAATTCAGAGCGGAGACCACTCTCTCCACCTAGGTGTCCCAGGCTGAGGGTGGCTGTAAGAGCCTaGCAGGGAAGATTCATGCCT +
Preference number: 4 (lower is better)
Translates to: GSNSERRPLSPPRCPRLRVAVRA*QGRFMP
Trigger: AGGCATGAATCTTCCCTGTCAGGCTCTTACAGCCAC...CCTCAGCCTGGGACACCTAGGTGGAGAGAGTGGTCTCCGCTCTGAATTGGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GCATACAGCATCTGGAAGCCATGCACGCTGCGGACAAACTTCTCCAGCTGCCTCAAGGTCTTGCTACCCTaGTCCTTCCATTCCCGCACC +
Preference number: 4 (lower is better)
Translates to: AYSIWKPCTLRTNFSSCLKVLLP*SFHSRT
Trigger: GGTGCGGGAATGGAAGGAGCAGGGTAGCAAGACCTT...GAGGCAGCTGGAGAAGTTTGTCCGCAGCGTGCATGGCTTCCAGATGCTGTATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000648728.1
CDS-3UTR GCA 90 bp GCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGCCAGCTCGTAAGCAGTaGAGATGTGTTGGAACAGGC +
Preference number: 4 (lower is better)
Translates to: AGQLQRIPFIIPAMAVHRPARKQ*RCVGTG
Trigger: GCCTGTTCCAACACATCTGCACTGCTTACGAGCTGG...CCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATGGAACTTTCTCTGCTCCCAGAAGATGCTaGGCGTGTGGCGGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: GKDLGRFPSLWNGNGTFSAPRRC*ACGGGS
Trigger: ACTACCACCGCCACACGCGCAGCATCTTCTGGGAGC...AGAGAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AGTGTGGATCTAGGAAAGCAGCCAAGCTTGAGTGAAGGGAAGATGCCTGACCACGCTGCTCGTACAGCTTaGGCAGGGTCTCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: SVDLGKQPSLSEGKMPDHAARTA*AGSHPG
Trigger: CCCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGC...GTGGTCAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCCTAGATCCACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CACCAAGACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCATCCTGCACCACGTGGTaGTGCTCGTACAGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: HQDKVGFGKDEACRVGEPSCTTW*CSYSLR
Trigger: GCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGA...TGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGGGCACCAGCATGTCCTaGACCACGTGGTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: RDEWLEKSSRCSFLPAPRGTSMS*TTWCCS
Trigger: CGAGCAGCACCACGTGGTGCAGGACATGCTGGTGCC...CCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACCGGAGGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAGGCACCAGCATGTCCTaGACCACGTGGTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: TGGCDSKIPSFPSPGLWIGTSMS*TTWCCS
Trigger: CGAGCAGCACCACGTGGTGCAGGACATGCTGGTGCC...TATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCCTCCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CTCGAAACGCAGCTTGACGTACTTCTTGGCAGGGATGATGCGGATCTCAGCGGCAGTGCCTGGCGGCCTTaGAGATCTTGTCGTACACCT +
Preference number: 4 (lower is better)
Translates to: LETQLDVLLGRDDADLSGSAWRP*RSCRTP
Trigger: AGGTGTACGACAAGATCTGCAAGGCCGCCAGGCACT...GCCGCTGAGATCCGCATCATCCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GGGAGGTTCCCTTCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTCGGGCTCCAGCTCAGTaGCTGGCGGCCTTGCAGATC +
Preference number: 4 (lower is better)
Translates to: GRFPSLWNGNGTFSELRIRAPAQ*LAALQI
Trigger: GATCTGCAAGGCCGCCAGGCACTGAGCTGGAGCCCG...AATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGTGAGTCCCCACTCCGTGGCTaGCCTCCTGAGATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: MSGWRNQVDALFFQPHGESPLRG*PPEIPG
Trigger: CCCTGGGATCTCAGGAGGGCAGCCACGGAGTGGGGA...CTCACCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTTCCCCACTCCGTGGCTaGCCTCCTGAGATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GCDSKIPSFPSPGLWIRSSPLRG*PPEIPG
Trigger: CCCTGGGATCTCAGGAGGGCAGCCACGGAGTGGGGA...AGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCGATTCAACCCTGGAATaGCTTCTCCAGGAACACAGG +
Preference number: 4 (lower is better)
Translates to: GGDGRATPAYPLHHSSHGDSTLE*LLQEHR
Trigger: CCTGTGTTCCTGGAGAAGGCATTCCAGGGTTGAATC...GCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCCCACTCCCCAGCCCCTaGTGCAGAGCAGCGCGGACC +
Preference number: 4 (lower is better)
Translates to: LSSLNSSFPYMTQFLLRFPLPSP*CRAART
Trigger: GGTCCGCGCTGCTCTGCAGCAGGGGCTGGGGAGTGG...GAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACCAGAGGACAATGACTTaGCCACGTTGCACAGCTCGC +
Preference number: 4 (lower is better)
Translates to: KTLLRHWQCAKPWVGWVNQRTMT*PRCTAR
Trigger: GCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTG...GTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCACAGAGGACAATGACTTaGCCACGTTGCACAGCTCGC +
Preference number: 4 (lower is better)
Translates to: EGLKPRSPDSHATTMTGSQRTMT*PRCTAR
Trigger: GCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTG...TGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CTCCAGCTGCCTCATGCAGGACCTGGCTTCAAAGTGTTTCACACGCGGCTCCCCAGACAGATGCTTCCCTaGAAGCCAGGTATGAGCCTT +
Preference number: 4 (lower is better)
Translates to: LQLPHAGPGFKVFHTRLPRQMLP*KPGMSL
Trigger: AAGGCTCATACCTGGCTTGCAGGGAAGCATCTGTCT...GGGGAGCCGCGTGTGAAACACTTTGAAGCCAGGTCCTGCATGAGGCAGCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCACCTTTGCCTTCTGAGTaGCTGGATGCCCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: HCRCDAEREATRATTYPAPLPSE*LDAPSP
Trigger: AGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGG...TGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TGCAGCTCAGAGGACAATGACTTGCCCACGTTGCACAGCTCGCTGACAGTAGAGAACACCCAGCGCTGGTaGATGAGCACGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: CSSEDNDLPTLHSSLTVENTQRW*MSTNSS
Trigger: GCTGGAGTTCGTGCTCATCCACCAGCGCTGGGTGTT...CTCTACTGTCAGCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGAGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTTCAGGAGGGAGATCTTGGGAGGCACCATCCAGCCAAAGAGGTAGCGGAAGATACGAACACCCAGCGCTaGTGGATGAGCACGAACTCC +
Preference number: 4 (lower is better)
Translates to: LQEGDLGRHHPAKEVAEDTNTQR*WMSTNS
Trigger: GGAGTTCGTGCTCATCCACCAGCGCTGGGTGTTCGT...ATCTTCCGCTACCTCTTTGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAGTCACCTGGCCCATaGTCACCAAGGGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: RHNHDWLSSLNSSFPYMTQSPGP*SPRAPH
Trigger: GTGTGGAGCCCTTGGTGACCATGGGCCAGGTGACTG...CGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGATCCAATTCAGAGCGGAGACCACTCTCTCCACCTAGGTGTCCCAGGCTGAGGGCAGTGCAGATGTGTTaGAACAGGCCGTACTTGTGG +
Preference number: 4 (lower is better)
Translates to: GSNSERRPLSPPRCPRLRAVQMC*NRPYLW
Trigger: CCACAAGTACGGCCTGTTCCAACACATCTGCACTGC...CCTCAGCCTGGGACACCTAGGTGGAGAGAGTGGTCTCCGCTCTGAATTGGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACTGCCGCTGGGACTCGTaGGTGAACTTGGCACAGATA +
Preference number: 4 (lower is better)
Translates to: KTLLRHWQCAKPWVGWVNCRWDS*VNLAQI
Trigger: TATCTGTGCCAAGTTCACCCACGAGTCCCAGCGGCA...GTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGATCCAATTCAGAGCGGAGACCACTCTCTCCACCTAGGTGTCCCAGGCTGAGGAGAGGTAGCGGAAGATaGGGTTGTTGCCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: GSNSERRPLSPPRCPRLRRGSGR*GCCQRG
Trigger: TCCCCTTTGGCAACAACCCCATCTTCCGCTACCTCT...CCTCAGCCTGGGACACCTAGGTGGAGAGAGTGGTCTCCGCTCTGAATTGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATGGAACTTTCTCTTGCACTAGGCCTGGCTaGCTGGGCAGGATGAACGGA +
Preference number: 4 (lower is better)
Translates to: GKDLGRFPSLWNGNGTFSCTRPG*LGRMNG
Trigger: TCCGTTCATCCTGCCCAGCCAGCCAGGCCTAGTGCA...AGAGAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCCTGCTAAGACACTGGGCCTCATGCAGGACCTaGCTTCAAAGTGTTTCACAC +
Preference number: 4 (lower is better)
Translates to: PSECLDAPSPHKTLLRHWASCRT*LQSVSH
Trigger: GTGTGAAACACTTTGAAGCCAGGTCCTGCATGAGGC...CCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCCCAGCCCTCACAAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGCCTCATGCAGGACCTaGCTTCAAAGTGTTTCACAC +
Preference number: 4 (lower is better)
Translates to: PQPSQDPAKTLAVCQALGASCRT*LQSVSH
Trigger: GTGTGAAACACTTTGAAGCCAGGTCCTGCATGAGGC...ACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCACAGGTGACCTAATGTaGAGCCTTTTCAGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GGDGRATPAYPLHHSSHGTGDLM*SLFRLH
Trigger: GTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGT...GCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGTCATCATTCCAGCCATaGCTGTGCACAGGTGACCTA +
Preference number: 4 (lower is better)
Translates to: FSCEDLVWLMEAMAGQLQSSFQP*LCTGDL
Trigger: TAGGTCACCTGTGCACAGCCATGGCTGGAATGATGA...CTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTTCAGGAGGGAGATCTTGGGAGGCACCATCCAGCCAAAGAGGTAGCGGAAGATCCTGAGATCCCAGGGTaGGGAAGAGCTGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LQEGDLGRHHPAKEVAEDPEIPG*GRAVLL
Trigger: GAGAAGGACAGCTCTTCCCCACCCTGGGATCTCAGG...ATCTTCCGCTACCTCTTTGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGGAGGTTCCCTTCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTTGGCACAGCGCATCTaGGGCCTCCCCACTCCGTGG +
Preference number: 4 (lower is better)
Translates to: GRFPSLWNGNGTFSELRILAQRI*GLPTPW
Trigger: CCACGGAGTGGGGAGGCCCCAGATGCGCTGTGCCAA...AATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCAAGAAGAATTGGCACAGCGCATCTaGGGCCTCCCCACTCCGTGG +
Preference number: 4 (lower is better)
Translates to: TKWVLGKMRPAGLVSQEELAQRI*GLPTPW
Trigger: CCACGGAGTGGGGAGGCCCCAGATGCGCTGTGCCAA...TTCTTCTTGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTCCTCGGACCTGGCTTTaGCACAGCGCATCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: NNQALRYNKPGKDLGRFPPRTWL*HSASGA
Trigger: GGCCCCAGATGCGCTGTGCCAAAGCCAGGTCCGAGG...AGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AACTCCATCCAAAACCATCACATGGATGGCCAGGGACAGGACTGGCTACAAAAAGGACTCAGTGGTGGCTaGGGTGGGCCTGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: NSIQNHHMDGQGQDWLQKGLSGG*GGPAGP
Trigger: TGGGCCTGCAGGCCCACCCCAGCCACCACTGAGTCC...TTTTTGTAGCCAGTCCTGTCCCTGGCCATCCATGTGATGGTTTTGGATGGAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGAAGCAACAAGAGCTACCACTTACCCAGCACCTTCAATGTGACCAGTGCTCAATCCGAGTGGACTCAGTaGTGGCTGGGGTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GSNKSYHLPSTFNVTSAQSEWTQ*WLGWAC
Trigger: GCAGGCCCACCCCAGCCACCACTGAGTCCACTCGGA...TTGAGCACTGGTCACATTGAAGGTGCTGGGTAAGTGGTAGCTCTTGTTGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTTTTGGACAAGATTCAACCCTaGAATGCCTTCTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: APAAEQRGPTPTKTKWVLDKIQP*NAFSRN
Trigger: GTTCCTGGAGAAGGCATTCCAGGGTTGAATCTTGTC...CAAAACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTGCTGCAGGCACTTCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTGCTCGACAAGATTCAACCCTaGAATGCCTTCTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LLQALHGHQHVLHHVVLLDKIQP*NAFSRN
Trigger: GTTCCTGGAGAAGGCATTCCAGGGTTGAATCTTGTC...GAGCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCCTGCTAAGACACTGGGAAATTAACTACAGCTaGGGTGGGGAGTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: PSECLDAPSPHKTLLRHWEINYS*GGEWWK
Trigger: CTTCCACCACTCCCCACCCCAGCTGTAGTTAATTTC...CCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGGAAATTAACTACAGCTaGGGTGGGGAGTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: FSCEDLVWLMEAMAGQLQEINYS*GGEWWK
Trigger: CTTCCACCACTCCCCACCCCAGCTGTAGTTAATTTC...CTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACCAGCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGGTCTCAGAAATTAACTACAGCTaGGGTGGGGAGTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: TSMSCTTWCCSYSLRRVSEINYS*GGEWWK
Trigger: CTTCCACCACTCCCCACCCCAGCTGTAGTTAATTTC...TGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCTGGCAACCCAGCTTCTCTCGCAGCTTGTGGTACAAGGAGCCATCAAACATCTTGCCTTCTGAGTGCCTaGATGCCCCCAGCCCTCACA +
Preference number: 4 (lower is better)
Translates to: PGNPASLAACGTRSHQTSCLLSA*MPPALT
Trigger: TGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCA...AGATGTTTGATGGCTCCTTGTACCACAAGCTGCGAGAGAAGCTGGGTTGCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTGACCTTGCAGAGGCAGAGAAGTaGGTGAGGACGCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LPCKPGMSLSGNEMGADLAEAEK*VRTPGG
Trigger: GCCTCCTGGCGTCCTCACCCACTTCTCTGCCTCTGC...AAGGTCAGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649769.1
3UTR CAA 72 bp GGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCTaGTGGTACAAGGAGCCATCAAACATCTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: GKASWQPSFSRS*WYKEPSNISQN
Trigger: GTTCTGGGAGATGTTTGATGGCTCCTTGTACCACAAGCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTGGCGCCCCGTGCACATaGAGGTCTTGCTACCCTGCT +
Preference number: 4 (lower is better)
Translates to: NNQALRYNKPGKDLGRFPGAPCT*RSCYPA
Trigger: AGCAGGGTAGCAAGACCTTCATGTGCACGGGGCGCC...AGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGCACGTAGTGAGACAGTaGGCCAGCCAGGGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: SLWNGNGTFSELRICKALHVVRQ*ASQGAP
Trigger: CGGGGCGCCCTGGCTGGCTCACTGTCTCACTACGTG...CAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAAGCTTGAGTGAACACGTAGTGAGACAGTaGGCCAGCCAGGGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: EGFLFESVDLGKQPSLSEHVVRQ*ASQGAP
Trigger: CGGGGCGCCCTGGCTGGCTCACTGTCTCACTACGTG...TTCACTCAAGCTTGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GCATACAGCATCTGGAAGCCATGCACGCTGCGGACAAACTTCTCCAGCTGCCTCGAAAGCAGCCAAGCTTaGGTGAAGGGAAGATGCCTG +
Preference number: 4 (lower is better)
Translates to: AYSIWKPCTLRTNFSSCLESSQA*VKGRCL
Trigger: CAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTC...GAGGCAGCTGGAGAAGTTTGTCCGCAGCGTGCATGGCTTCCAGATGCTGTATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000648728.1
CDS-3UTR TCA 90 bp ACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACACCGGACTCAGGCTTGTCTaGCTCCAAATCCCACATTCT +
Preference number: 4 (lower is better)
Translates to: TLLRHWQCAKPWVGWVNTGLRLV*LQIPHS
Trigger: AGAATGTGGGATTTGGAGTCAGACAAGCCTGAGTCC...GGTGTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TCCCCTGGATCCAATTCAGAGCGGAGACCACTCTCTCCACCTAGGTGTCCCAGGATGGCTGTGCACAGGTaGCCTAATGTGGAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: SPGSNSERRPLSPPRCPRMAVHR*PNVEPF
Trigger: AAAAGGCTCCACATTAGGTCACCTGTGCACAGCCAT...CCTGGGACACCTAGGTGGAGAGAGTGGTCTCCGCTCTGAATTGGATCCAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GGATCCAATTCAGAGCGGAGACCACTCTCTCCACCTAGGTGTCCCAGGCTGAGGATGGCTGTGCACAGGTaGCCTAATGTGGAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: GSNSERRPLSPPRCPRLRMAVHR*PNVEPF
Trigger: AAAAGGCTCCACATTAGGTCACCTGTGCACAGCCAT...CCTCAGCCTGGGACACCTAGGTGGAGAGAGTGGTCTCCGCTCTGAATTGGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGTGACCACAGTAGAGAGGGGCTaGAACCTAGGTCTCCTGACT +
Preference number: 4 (lower is better)
Translates to: ATPAYPLHHSSHGCAQVTTVERG*NLGLLT
Trigger: AGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACTGT...GGTCACCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCGACTTTCCACACAAATaGGGCTTTCCGTGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: LVWLMEAMAGQLQRIPFIDFPHK*GFPWVL
Trigger: CAAAACCCACGGAAAGCCTCATTTGTGTGGAAAGTC...GATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CCCCAGCCCTCACAAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGACTTTCCACACAAATaGGGCTTTCCGTGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: PQPSQDPAKTLAVCQALGDFPHK*GFPWVL
Trigger: CAAAACCCACGGAAAGCCTCATTTGTGTGGAAAGTC...ACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTGACCTTGGTTCCTTTGCCTTCTaGGTGCCTGGATGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LPCKPGMSLSGNEMGADLGSFAF*VPGCPQ
Trigger: CTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACC...AAGGTCAGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGGGTTCCTTTGCCTTCTaGGTGCCTGGATGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: RDEWLEKSSRCSFLPAPRGSFAF*VPGCPQ
Trigger: CTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACC...CCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GATGGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATCCAGCTCGTAAGCAGTaGAGATGTGTTGGAACAGGC +
Preference number: 4 (lower is better)
Translates to: DGGDGRATPAYPLHHSSHPARKQ*RCVGTG
Trigger: GCCTGTTCCAACACATCTGCACTGCTTACGAGCTGG...ATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ATACTCTGGGCCACTCACCCATGCACGCTGCGGACAAACTTCTCCAGCTGCCTCAGTTTTCGGACGGAGTaGATCGCACAAAGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: ILWATHPCTLRTNFSSCLSFRTE*IAQSCH
Trigger: ATGGCAGCTTTGTGCGATGCACTCCGTCCGAAAACT...GAGGCAGCTGGAGAAGTTTGTCCGCAGCGTGCATGGGTGAGTGGCCCAGAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR GCA 90 bp ACCGGAGGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAACGAAGTGGTTCTCCTaGCGCTGGGACTCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: TGGCDSKIPSFPSPGLWITKWFS*RWDSWV
Trigger: CACCCACGAGTCCCAGCGGCAGGAGAACCACTTCGT...TATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCCTCCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAGCTTGCTGGGCTCTaGCTCATCTGTCATGACCCC +
Preference number: 4 (lower is better)
Translates to: RHNHDWLSSLNSSFPYMTQLAGL*LICHDP
Trigger: GGGGTCATGACAGATGAGGCAGAGCCCAGCAAGCTG...CGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGCTGAAGCTCCCAGAAGATGCTaGGCGTGTGGCGGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: TGDLMWSLFRLHCRCDAEAPRRC*ACGGGS
Trigger: ACTACCACCGCCACACGCGCAGCATCTTCTGGGAGC...TTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATGCTCCCAGAAGATGCTaGGCGTGTGGCGGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: YNKPGKDLGRFPSLWNGNAPRRC*ACGGGS
Trigger: ACTACCACCGCCACACGCGCAGCATCTTCTGGGAGC...ATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TCACACGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACAGCTCCCAGAAGATGCTaGGCGTGTGGCGGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: SHATTMTGSAPLIPASLTAPRRC*ACGGGS
Trigger: ACTACCACCGCCACACGCGCAGCATCTTCTGGGAGC...TGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCAAGAAGAAGGAGCTCCCAGAAGATaGTGCGCGTGTGGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: TKWVLGKMRPAGLVSQEEGAPRR*CACGGG
Trigger: ACCACCGCCACACGCGCAGCATCTTCTGGGAGCTCC...TTCTTCTTGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGCTGCTCGTACAGCTTaGGCAGGGTCTCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: RGMSGWRNQVDALFFQPHAARTA*AGSHPG
Trigger: CCCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGC...GTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTTCCTGCACCACGTGGTaGTGCTCGTACAGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: QMLPCKPGMSLSGNEMGASCTTW*CSYSLR
Trigger: GCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGA...AGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCAAGGTGTGCAGGGCCTaGTGCAGGCACTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: NQALRYNKPGKDLGRFPSKVCRA*CRHFMG
Trigger: GCCCATGAAGTGCCTGCAGCAGGCCCTGCACACCTT...GGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAACGCGGCTCCCCATATaGTCCAATGTCGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: EGLKPRSPDSHATTMTGSTRLPI*SNVDVE
Trigger: CTCTACATCGACATTGGAGCATATGGGGAGCCGCGT...TGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCACGCGGCTCCCCATATaGTCCAATGTCGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: REGLKPRSPDSHATTMTGTRLPI*SNVDVE
Trigger: CTCTACATCGACATTGGAGCATATGGGGAGCCGCGT...GCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CTCCTCCCGGTTCATGTAGCAGTCGGCATACAGCATCTGGAAGCCATGCACGCTAGCATCTGGAAGCCATaGACGCTGCGGACAAACTTC +
Preference number: 4 (lower is better)
Translates to: LLPVHVAVGIQHLEAMHASIWKP*TLRTNF
Trigger: GAAGTTTGTCCGCAGCGTGCATGGCTTCCAGATGCT...AGCGTGCATGGCTTCCAGATGCTGTATGCCGACTGCTACATGAACCGGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000648728.1
CDS-3UTR GCA 90 bp CCTGACTCACACGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCAGTGCCTGGCGGCCTTaGAGATCTTGTCGTACACCT +
Preference number: 4 (lower is better)
Translates to: PDSHATTMTGSAPLIPASSAWRP*RSCRTP
Trigger: AGGTGTACGACAAGATCTGCAAGGCCGCCAGGCACT...GGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TCCCCTGGATCCAATTCAGAGCGGAGACCACTCTCTCCACCTAGGTGTCCCAGGGATTCAACCCTGGAATaGCTTCTCCAGGAACACAGG +
Preference number: 4 (lower is better)
Translates to: SPGSNSERRPLSPPRCPRDSTLE*LLQEHR
Trigger: CCTGTGTTCCTGGAGAAGGCATTCCAGGGTTGAATC...CCTGGGACACCTAGGTGGAGAGAGTGGTCTCCGCTCTGAATTGGATCCAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AGTCGGCATACAGCATCTGGAAGCCATGCACGCTGCGGACAAACTTCTCCAGCTGGGAAAGATGAGGCCTaGAGGGTTGGTGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: SRHTASGSHARCGQTSPAGKDEA*RVGEPR
Trigger: TCTTGGCTCACCAACCCTGCAGGCCTCATCTTTCCC...AGCTGGAGAAGTTTGTCCGCAGCGTGCATGGCTTCCAGATGCTGTATGCCGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000648728.1
CDS-3UTR GCA 90 bp CCTGACTCACACGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCCAGAGGACAATGACTTaGCCACGTTGCACAGCTCGC +
Preference number: 4 (lower is better)
Translates to: PDSHATTMTGSAPLIPASQRTMT*PRCTAR
Trigger: GCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTG...GGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GATGGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGTAGGGTGGTTCCTTTaGCTTCTGAGTGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: DGGDGRATPAYPLHHSSHVGWFL*LLSAWM
Trigger: CATCCAGGCACTCAGAAGGCAAAGGAACCACCCTAC...ATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTTTTGACTTTCCACATGCACTaGCCACTGGCATCAAGTTTA +
Preference number: 4 (lower is better)
Translates to: APAAEQRGPTPTKTKWVLTFHMH*PLASSL
Trigger: TAAACTTGATGCCAGTGGGCAGTGCATGTGGAAAGT...CAAAACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCCTGATACTTTCCACATaGACTGCCCACTGGCATCAA +
Preference number: 4 (lower is better)
Translates to: LVWLMEAMAGQLQRIPFILILST*TAHWHQ
Trigger: TTGATGCCAGTGGGCAGTGCATGTGGAAAGTATCAG...GATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAAACACCCAGCGCTGGTaGATGAGCACGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: WSLFRLHCRCDAEREATRNTQRW*MSTNSS
Trigger: GCTGGAGTTCGTGCTCATCCACCAGCGCTGGGTGTT...TCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCTGGCAACCCAGCTTCTCTCGCAGCTTGTGGTACAAGGAGCCATCAAACATCTAACACCCAGCGCTGGTaGATGAGCACGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: PGNPASLAACGTRSHQTSNTQRW*MSTNSS
Trigger: GCTGGAGTTCGTGCTCATCCACCAGCGCTGGGTGTT...AGATGTTTGATGGCTCCTTGTACCACAAGCTGCGAGAGAAGCTGGGTTGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AACTCCATCCAAAACCATCACATGGATGGCCAGGGACAGGACTGGCTACAAAAATCCCGCACCTGCTTCTaGATGTCCCGCACGCGCTGC +
Preference number: 4 (lower is better)
Translates to: NSIQNHHMDGQGQDWLQKSRTCF*MSRTRC
Trigger: GCAGCGCGTGCGGGACATCCAGAAGCAGGTGCGGGA...TTTTTGTAGCCAGTCCTGTCCCTGGCCATCCATGTGATGGTTTTGGATGGAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CGTCCCAGTGGCTTAGGGTTGGAGGCTTCACTGGCAAAACAATGGCACTGTTTACAGTCACCTGGCCCATaGTCACCAAGGGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: RPSGLGLEASLAKQWHCLQSPGP*SPRAPH
Trigger: GTGTGGAGCCCTTGGTGACCATGGGCCAGGTGACTG...TAAACAGTGCCATTGTTTTGCCAGTGAAGCCTCCAACCCTAAGCCACTGGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACCCAGCTTCTCTCGCAGCTTGTGGTACAAGGAGCCATCAAACATCTCCCAGAACAGTCACCTGGCCCATaGTCACCAAGGGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: TQLLSQLVVQGAIKHLPEQSPGP*SPRAPH
Trigger: GTGTGGAGCCCTTGGTGACCATGGGCCAGGTGACTG...TTCTGGGAGATGTTTGATGGCTCCTTGTACCACAAGCTGCGAGAGAAGCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTAGGAAAGCAGCCAAGCTTGAGTGAAGGGAAGATGCCTGACCACTCACACGTGGGAGAGTCCAGCCAATaGAGGTCAGCAGGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: LGKQPSLSEGKMPDHSHVGESSQ*RSAGQS
Trigger: TGACTGCCCTGCTGACCTCCATTGGCTGGACTCTCC...CACGTGTGAGTGGTCAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTCTCCAGGCCCCGCACTaGCTCGAAACGCAGCTTGAC +
Preference number: 4 (lower is better)
Translates to: GCDSKIPSFPSPGLWIRSLQAPH*LETQLD
Trigger: GTCAAGCTGCGTTTCGAGCCAGTGCGGGGCCTGGAG...AGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACCTCCAGGCCCCGCACTaGCTCGAAACGCAGCTTGAC +
Preference number: 4 (lower is better)
Translates to: RGMSGWRNQVDALFFQPHLQAPH*LETQLD
Trigger: GTCAAGCTGCGTTTCGAGCCAGTGCGGGGCCTGGAG...GTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GATGGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATAGAGGTAGCGGAAGATaGGGTTGTTGCCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: DGGDGRATPAYPLHHSSHRGSGR*GCCQRG
Trigger: TCCCCTTTGGCAACAACCCCATCTTCCGCTACCTCT...ATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TGCAGCTCAGAGGACAATGACTTGCCCACGTTGCACAGCTCGCTGACAGTAGAGTCAGGAGGGAGATCTTaGGAGGCACCATCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: CSSEDNDLPTLHSSLTVESGGRS*EAPSSQ
Trigger: TTGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGA...CTCTACTGTCAGCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGAGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CACCAAGACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCAGCTGCAGGCACTTCATaGGCACCAGCATGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HQDKVGFGKDEACRVGEPAAGTS*APACPA
Trigger: TGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGC...TGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCTGACTCACACGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCACGGACACAGCCAGATaGGGTAGACGTGGATGTCGT +
Preference number: 4 (lower is better)
Translates to: PDSHATTMTGSAPLIPASTDTAR*GRRGCR
Trigger: ACGACATCCACGTCTACCCCATCTGGCTGTGTCCGT...GGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTCCCTTAATTGGAGGAAGGTGGTGTTaGGCTGTCAGGGTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: PRSPDSHATTMTGSAPLIGGRWC*AVRVGV
Trigger: AACTCCCACCCTGACAGCCCAACACCACCTTCCTCC...AATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGTCATCATTCCAGCCATaGCTGTGCACAGGTGACCTA +
Preference number: 4 (lower is better)
Translates to: AGQLQRIPFIIPAMAVHRSSFQP*LCTGDL
Trigger: TAGGTCACCTGTGCACAGCCATGGCTGGAATGATGA...CCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TTGCAACCACAGTGTCTAAGACAATCAGAAGGGTTCCAGGGAGGTCTTGTCTGTTCCGAGTGGACTCAGTaGTGGCTGGGGTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LQPQCLRQSEGFQGGLVCSEWTQ*WLGWAC
Trigger: GCAGGCCCACCCCAGCCACCACTGAGTCCACTCGGA...ACAGACAAGACCTCCCTGGAACCCTTCTGATTGTCTTAGACACTGTGGTTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACCCATCTCCACCCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTGGCCATCCGAGTGGACTCAGTaGTGGCTGGGGTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: THLHPSLSVISKYSSFWPSEWTQ*WLGWAC
Trigger: GCAGGCCCACCCCAGCCACCACTGAGTCCACTCGGA...TGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGGGTGGAGATGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCAAGAAGAAACAGGGCACTCCGAGTaGACTCAGTGGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TKWVLGKMRPAGLVSQEETGHSE*TQWWLG
Trigger: CCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGT...TTCTTCTTGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ATCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCGACAAGATTCAACCCTaGAATGCCTTCTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: ILSYTSGKASWQPSFSRSDKIQP*NAFSRN
Trigger: GTTCCTGGAGAAGGCATTCCAGGGTTGAATCTTGTC...GCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGAGGTGTACGACAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GCGCGTGTGGCGGTGGTAGTAGTGTCTCAAGGGAATGTACTCCAGGCCCTCTCGAGGTTCCCTTCCCTCTaGAACGGAAATGGAACTTTC +
Preference number: 4 (lower is better)
Translates to: ARVAVVVVSQGNVLQALSRFPSL*NGNGTF
Trigger: GAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCT...CGAGAGGGCCTGGAGTACATTCCCTTGAGACACTACTACCACCGCCACACGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGCTGAACGGGAAGCAACAAGACAGTGTGCCAAGCCTTaGGTGGGATGGGTGAACACC +
Preference number: 4 (lower is better)
Translates to: WSLFRLHCRCDAEREATRQCAKP*VGWVNT
Trigger: GGTGTTCACCCATCCCACCCAAGGCTTGGCACACTG...TCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTCCCTTAATTCAGTGTGCCAAGCCTTaGGTGGGATGGGTGAACACC +
Preference number: 4 (lower is better)
Translates to: PRSPDSHATTMTGSAPLIQCAKP*VGWVNT
Trigger: GGTGTTCACCCATCCCACCCAAGGCTTGGCACACTG...AATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCACACGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGGCCACCGTCCCAGTaGCTTAGGGTTGGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: SHATTMTGSAPLIPASLTWPPSQ*LRVGGF
Trigger: GAAGCCTCCAACCCTAAGCCACTGGGACGGTGGCCA...TGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGTGAGGGCTGCTGGCATCTCTaGCCACCGTCCCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: MSGWRNQVDALFFQPHGEGCWHL*PPSQWL
Trigger: AAGCCACTGGGACGGTGGCCAGAGATGCCAGCAGCC...CTCACCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACGGCACCAAGGATGGCAGGGAGAACTTTGGCCTCGGACCTGGCTTTGGCACAGCAGGCAAGATTTTACTaGAGCAACATAACCGGAGGG +
Preference number: 4 (lower is better)
Translates to: TAPRMAGRTLASDLALAQQARFY*SNITGG
Trigger: CCCTCCGGTTATGTTGCTCCAGTAAAATCTTGCCTG...CTGTGCCAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCATCCTTGGTGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
3UTR CAA 72 bp CAAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTaGGGTGGGATGGGTGAACACCCTTCAATGACTCTG +
Preference number: 4 (lower is better)
Translates to: QDPAKTLAVCQA*GGMGEHPSMTL
Trigger: CAGAGTCATTGAAGGGTGTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATGGAACTTTCTCTGCTCGAAACGCAGCTTaGCGTACTTCTTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GKDLGRFPSLWNGNGTFSARNAA*RTSWQG
Trigger: TCCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGC...AGAGAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCCTGCTAAGACACTGGGGAGGGGTTTCTCTTTaGAAGTGTGGATCTAGGAAA +
Preference number: 4 (lower is better)
Translates to: PSECLDAPSPHKTLLRHWGGVSL*KCGSRK
Trigger: TTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCC...CCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp ACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACACCCCAGCTTCCCTTACATaGCGCAATTCCTTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: TLLRHWQCAKPWVGWVNTPASLT*RNSFSD
Trigger: ATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGG...GGTGTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTTTTGAGGAAGGATCTTGAATaGCAGATAATCCCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: APAAEQRGPTPTKTKWVLRKDLE*QIIPKC
Trigger: ACACTTGGGGATTATCTGTCATTCAAGATCCTTCCT...CAAAACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTTCTGGCACCTGGAATaGCAAGACAGATGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: REGLKPRSPDSHATTMTGFWHLE*QDRCFP
Trigger: AGGGAAGCATCTGTCTTGTCATTCCAGGTGCCAGAA...GCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp ATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGTGAGGGTTCCTTTGCCTTCTaGGTGCCTGGATGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: MSGWRNQVDALFFQPHGEGSFAF*VPGCPQ
Trigger: CTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACC...CTCACCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CACCAAGACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCAAAGGTCTTGCTACCCTaGTCCTTCCATTCCCGCACC +
Preference number: 4 (lower is better)
Translates to: HQDKVGFGKDEACRVGEPKVLLP*SFHSRT
Trigger: GGTGCGGGAATGGAAGGAGCAGGGTAGCAAGACCTT...TGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGCTCCCAGAAGATGCTaGGCGTGTGGCGGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: RGMSGWRNQVDALFFQPHAPRRC*ACGGGS
Trigger: ACTACCACCGCCACACGCGCAGCATCTTCTGGGAGC...GTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GTGGGAGTTCTGGAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCATGCACCACGTGGTGCTaGTCGTACAGCTTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: VGVLEGFLFESVDLGKQPCTTWC*SYSLRR
Trigger: CCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCA...TGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCCAGAACTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACTCCTGCACCACGTGGTaGTGCTCGTACAGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: RGMSGWRNQVDALFFQPHSCTTW*CSYSLR
Trigger: GCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGA...GTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACCCATCTCCACCCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTGGCCAGGCACCAGCATGTCCTaGACCACGTGGTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: THLHPSLSVISKYSSFWPGTSMS*TTWCCS
Trigger: CGAGCAGCACCACGTGGTGCAGGACATGCTGGTGCC...TGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGGGTGGAGATGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGCAGTTCTTAAGAGGCACCAGCATGTCCTaGACCACGTGGTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: TQFLLRFGFSAEAGQFLRGTSMS*TTWCCS
Trigger: CGAGCAGCACCACGTGGTGCAGGACATGCTGGTGCC...TCTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GGGAGGTTCCCTTCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTAAGGTGTGCAGGGCCTaGTGCAGGCACTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: GRFPSLWNGNGTFSELRIKVCRA*CRHFMG
Trigger: GCCCATGAAGTGCCTGCAGCAGGCCCTGCACACCTT...AATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGAAGGTGTGCAGGGCCTaGTGCAGGCACTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: FPYMTQFLLRFGFSAEAGKVCRA*CRHFMG
Trigger: GCCCATGAAGTGCCTGCAGCAGGCCCTGCACACCTT...CCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGTCGATGTAGAGCTCTaGCTCATTTCCTTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: EGLKPRSPDSHATTMTGSVDVEL*LISFGV
Trigger: CACCCCAAAGGAAATGAGGCAGAGCTCTACATCGAC...TGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CTGTGCACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGGGAAAGATGAGGCCTaGAGGGTTGGTGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: LCTGDLMWSLFRLHCRCDGKDEA*RVGEPR
Trigger: TCTTGGCTCACCAACCCTGCAGGCCTCATCTTTCCC...GTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGTGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CCTGGCAACCCAGCTTCTCTCGCAGCTTGTGGTACAAGGAGCCATCAAACATCTAAGACACTGGCAGTGTaGCAAGCCTTGGGTGGGATG +
Preference number: 4 (lower is better)
Translates to: PGNPASLAACGTRSHQTSKTLAV*QALGGM
Trigger: CATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTT...AGATGTTTGATGGCTCCTTGTACCACAAGCTGCGAGAGAAGCTGGGTTGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CACCAAGACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCAAAGACACTGGCAGTGTaGCAAGCCTTGGGTGGGATG +
Preference number: 4 (lower is better)
Translates to: HQDKVGFGKDEACRVGEPKTLAV*QALGGM
Trigger: CATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTT...TGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TTGCAACCACAGTGTCTAAGACAATCAGAAGGGTTCCAGGGAGGTCTTGTCTGTAAGGGCGACAGAGGCTaGTGGCATCTCTGGCCACCG +
Preference number: 4 (lower is better)
Translates to: LQPQCLRQSEGFQGGLVCKGDRG*WHLWPP
Trigger: CGGTGGCCAGAGATGCCAGCAGCCTCTGTCGCCCTT...ACAGACAAGACCTCCCTGGAACCCTTCTGATTGTCTTAGACACTGTGGTTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GTGGGAGTTCTGGAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCACAGTCACCTGGCCCATaGTCACCAAGGGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: VGVLEGFLFESVDLGKQPQSPGP*SPRAPH
Trigger: GTGTGGAGCCCTTGGTGACCATGGGCCAGGTGACTG...TGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCCAGAACTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGTGGTTCTCCTGCCGCTaGGACTCGTGGGTGAACTTG +
Preference number: 4 (lower is better)
Translates to: RDEWLEKSSRCSFLPAPRWFSCR*DSWVNL
Trigger: CAAGTTCACCCACGAGTCCCAGCGGCAGGAGAACCA...CCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCTGGTTCTCCTGCCGCTaGGACTCGTGGGTGAACTTG +
Preference number: 4 (lower is better)
Translates to: NQALRYNKPGKDLGRFPSWFSCR*DSWVNL
Trigger: CAAGTTCACCCACGAGTCCCAGCGGCAGGAGAACCA...GGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTCCCTTAATTTCAGGAGGGAGATCTTaGGAGGCACCATCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: PRSPDSHATTMTGSAPLISGGRS*EAPSSQ
Trigger: TTGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGA...AATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACAAGACAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGCGCAGGGTCTCACCCTaGGTCAGCTTCAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: TRQMLPCKPGMSLSGNEMRRVSP*VSFRRE
Trigger: CTCCCTCCTGAAGCTGACCCAGGGTGAGACCCTGCG...CATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTGTCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTCCCTTAATTACGTGGATGTCGTTTTaGAAGGTGTGCAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PRSPDSHATTMTGSAPLITWMSF*KVCRAC
Trigger: GCAGGCCCTGCACACCTTCCAAAACGACATCCACGT...AATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAACGTGGATGTCGTTTTaGAAGGTGTGCAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: WSLFRLHCRCDAEREATRTWMSF*KVCRAC
Trigger: GCAGGCCCTGCACACCTTCCAAAACGACATCCACGT...TCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ATCTGTCATGACCCCTGTCATAATGACAGCCTCATCCAGGGAGTAGAGCAGCCCCTGCCTCATTTCCTTTaGGGTGCACTAGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ICHDPCHNDSLIQGVEQPLPHFL*GALGLA
Trigger: AGCCAGGCCTAGTGCACCCCAAAGGAAATGAGGCAG...GGGCTGCTCTACTCCCTGGATGAGGCTGTCATTATGACAGGGGTCATGACAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TTGCAACCACAGTGTCTAAGACAATCAGAAGGGTTCCAGGGAGGTCTTGTCTGTTCGGGGAAGGCGTCCTaGCAACCCAGCTTCTCTCGC +
Preference number: 4 (lower is better)
Translates to: LQPQCLRQSEGFQGGLVCSGKAS*QPSFSR
Trigger: GCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGA...ACAGACAAGACCTCCCTGGAACCCTTCTGATTGTCTTAGACACTGTGGTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AACTCCATCCAAAACCATCACATGGATGGCCAGGGACAGGACTGGCTACAAAAATCGGGGAAGGCGTCCTaGCAACCCAGCTTCTCTCGC +
Preference number: 4 (lower is better)
Translates to: NSIQNHHMDGQGQDWLQKSGKAS*QPSFSR
Trigger: GCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGA...TTTTTGTAGCCAGTCCTGTCCCTGGCCATCCATGTGATGGTTTTGGATGGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGCTGAACTCCAGCTCAGTGCCTaGCGGCCTTGCAGATCTTGT +
Preference number: 4 (lower is better)
Translates to: TGDLMWSLFRLHCRCDAELQLSA*RPCRSC
Trigger: ACAAGATCTGCAAGGCCGCCAGGCACTGAGCTGGAG...TTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCACACGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACAAAGCCAGGAGGAAGGTaGTGTTGGGCTGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SHATTMTGSAPLIPASLTKPGGR*CWAVRV
Trigger: CACCCTGACAGCCCAACACCACCTTCCTCCTGGCTT...TGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGCTGAAAAGCCAGGAGGAAGGTaGTGTTGGGCTGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TGDLMWSLFRLHCRCDAEKPGGR*CWAVRV
Trigger: CACCCTGACAGCCCAACACCACCTTCCTCCTGGCTT...TTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCACTTCTTTCCATTCCACTaGGCTGCCCCCTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TADVTLNGKQQELPLTQHFFPFH*AAPWKP
Trigger: TGGCTTCCAGGGGGCAGCCCAGTGGAATGGAAAGAA...GTGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGTAGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTTTCTTTCCATTCCACTaGGCTGCCCCCTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SREGLKPRSPDSHATTMTFFPFH*AAPWKP
Trigger: TGGCTTCCAGGGGGCAGCCCAGTGGAATGGAAAGAA...AGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GATGGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATACAGGTGACCTAATGTaGAGCCTTTTCAGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: DGGDGRATPAYPLHHSSHTGDLM*SLFRLH
Trigger: GTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGT...ATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGTGTGAGGACCTCGTCTaGCTGATGGAGGCGATGGCA +
Preference number: 4 (lower is better)
Translates to: RDEWLEKSSRCSFLPAPRCEDLV*LMEAMA
Trigger: TGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACA...CCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACCCAGCTTCTCTCGCAGCTTGTGGTACAAGGAGCCATCAAACATCTCCCAGAATGTGAGGACCTCGTCTaGCTGATGGAGGCGATGGCA +
Preference number: 4 (lower is better)
Translates to: TQLLSQLVVQGAIKHLPECEDLV*LMEAMA
Trigger: TGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACA...TTCTGGGAGATGTTTGATGGCTCCTTGTACCACAAGCTGCGAGAGAAGCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATCCTGAGATCCCAGGGTaGGGAAGAGCTGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: YNKPGKDLGRFPSLWNGNPEIPG*GRAVLL
Trigger: GAGAAGGACAGCTCTTCCCCACCCTGGGATCTCAGG...ATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCCCTGAGATCCCAGGGTaGGGAAGAGCTGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: NQALRYNKPGKDLGRFPSPEIPG*GRAVLL
Trigger: GAGAAGGACAGCTCTTCCCCACCCTGGGATCTCAGG...GGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGTTGGCACAGCGCATCTaGGGCCTCCCCACTCCGTGG +
Preference number: 4 (lower is better)
Translates to: SLWNGNGTFSELRICKALLAQRI*GLPTPW
Trigger: CCACGGAGTGGGGAGGCCCCAGATGCGCTGTGCCAA...CAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACCGGAGGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATACTTTGGCCTCGGACCTaGCTTTGGCACAGCGCATCT +
Preference number: 4 (lower is better)
Translates to: TGGCDSKIPSFPSPGLWILWPRT*LWHSAS
Trigger: AGATGCGCTGTGCCAAAGCCAGGTCCGAGGCCAAAG...TATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCCTCCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACCGGAGGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAGGACGGCACCAAGGATaGCAGGGAGAACTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: TGGCDSKIPSFPSPGLWIGRHQG*QGELWP
Trigger: AGGCCAAAGTTCTCCCTGCCATCCTTGGTGCCGTCC...TATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCCTCCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTGACCTTGGACGGCACCAAGGATaGCAGGGAGAACTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LPCKPGMSLSGNEMGADLGRHQG*QGELWP
Trigger: AGGCCAAAGTTCTCCCTGCCATCCTTGGTGCCGTCC...AAGGTCAGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGATCCAATTCAGAGCGGAGACCACTCTCTCCACCTAGGTGTCCCAGGCTGAGGCCCACCAAGACAAAGTaGGTTTTGGGAAAGATGAGG +
Preference number: 4 (lower is better)
Translates to: GSNSERRPLSPPRCPRLRPTKTK*VLGKMR
Trigger: CCTCATCTTTCCCAAAACCCACTTTGTCTTGGTGGG...CCTCAGCCTGGGACACCTAGGTGGAGAGAGTGGTCTCCGCTCTGAATTGGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTGAAATTAACTACAGCTaGGGTGGGGAGTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GLKPRSPDSHATTMTGSAEINYS*GGEWWK
Trigger: CTTCCACCACTCCCCACCCCAGCTGTAGTTAATTTC...AGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TGCAGCTCAGAGGACAATGACTTGCCCACGTTGCACAGCTCGCTGACAGTAGAGCGCCACAACCATGACTaGCTCAGCTCCCTTAATTCC +
Preference number: 4 (lower is better)
Translates to: CSSEDNDLPTLHSSLTVERHNHD*LSSLNS
Trigger: GGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG...CTCTACTGTCAGCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCCCAGCCCTCACAAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTTCCCCAAGTGTCCACTaGATCATTTTTCCTCTGACT +
Preference number: 4 (lower is better)
Translates to: PQPSQDPAKTLAVCQALGSPSVH*IIFPLT
Trigger: AGTCAGAGGAAAAATGATCCAGTGGACACTTGGGGA...ACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CACCAAGACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCAACCCTGCTAAGACACTaGCAGTGTGCCAAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: HQDKVGFGKDEACRVGEPTLLRH*QCAKPW
Trigger: CCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGT...TGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACTGCCTTCTGAGTGCCTaGATGCCCCCAGCCCTCACA +
Preference number: 4 (lower is better)
Translates to: RGMSGWRNQVDALFFQPHCLLSA*MPPALT
Trigger: TGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCA...GTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTTGCCTTCTGAGTGCCTaGATGCCCCCAGCCCTCACA +
Preference number: 4 (lower is better)
Translates to: GCDSKIPSFPSPGLWIRSCLLSA*MPPALT
Trigger: TGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCA...AGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTAGGAAAGCAGCCAAGCTTGAGTGAAGGGAAGATGCCTGACCACTCACACGTGCCTCCAGAGGCCAAATaGGTAGGGTGGTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LGKQPSLSEGKMPDHSHVPPEAK*VGWFLC
Trigger: GCAAAGGAACCACCCTACCCATTTGGCCTCTGGAGG...CACGTGTGAGTGGTCAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGAGGCTGCTGGCATCTCTaGCCACCGTCCCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: WLSSLNSSFPYMTQFLLRGCWHL*PPSQWL
Trigger: AAGCCACTGGGACGGTGGCCAGAGATGCCAGCAGCC...TCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TGCAGCTCAGAGGACAATGACTTGCCCACGTTGCACAGCTCGCTGACAGTAGAGCCAAGCCCCGGGTTGTaGATAAGGTCTGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: CSSEDNDLPTLHSSLTVEPSPGL*IRSGFW
Trigger: CCAAAATCCAGACCTTATCCACAACCCGGGGCTTGG...CTCTACTGTCAGCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGAGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTCTGGCCTCATTCCCCTaGAGCAGTACCCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SFPYMTQFLLRFGFSAEALASFP*SSTLGL
Trigger: CAGCCCCAGGGTACTGCTCCAGGGGAATGAGGCCAG...AGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR TCA 90 bp CTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCACACGTAGTGAGACAGTaGGCCAGCCAGGGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: LNSSFPYMTQFLLRFGFSHVVRQ*ASQGAP
Trigger: CGGGGCGCCCTGGCTGGCTCACTGTCTCACTACGTG...TGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CAGATGTGTTGGAACAGGCCGTACTTGTGGGATGATGACTCGATGCCTGTGCCCCCAGCACCTTCAATGTaGCCAGTGCTCAACTCAGAT +
Preference number: 4 (lower is better)
Translates to: QMCWNRPYLWDDDSMPVPPAPSM*PVLNSD
Trigger: ATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGG...GGGCACAGGCATCGAGTCATCATCCCACAAGTACGGCCTGTTCCAACACATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CGCAGCTTGTGGTACAAGGAGCCATCAAACATCTCCCAGAACTCCTCCCGGTTCCCAGCACCTTCAATGTaGCCAGTGCTCAACTCAGAT +
Preference number: 4 (lower is better)
Translates to: RSLWYKEPSNISQNSSRFPAPSM*PVLNSD
Trigger: ATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGG...GAACCGGGAGGAGTTCTGGGAGATGTTTGATGGCTCCTTGTACCACAAGCTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TGCAGCTCAGAGGACAATGACTTGCCCACGTTGCACAGCTCGCTGACAGTAGAGATTCGGGTTTTCAGCTaGGGCTGGGCAGTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: CSSEDNDLPTLHSSLTVEIRVFS*GWAVLK
Trigger: CTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAAT...CTCTACTGTCAGCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGAGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CTTCAGGAGGGAGATCTTGGGAGGCACCATCCAGCCAAAGAGGTAGCGGAAGATATTCGGGTTTTCAGCTaGGGCTGGGCAGTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: LQEGDLGRHHPAKEVAEDIRVFS*GWAVLK
Trigger: CTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAAT...ATCTTCCGCTACCTCTTTGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GCCCTCTGCCATCCCCAGGCAACTACTGATGCGCTATCAGTATGGATTCATGTGACAGTAGAGAGGGGCTaGAACCTAGGTCTCCTGACT +
Preference number: 4 (lower is better)
Translates to: ALCHPQATTDALSVWIHVTVERG*NLGLLT
Trigger: AGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACTGT...CACATGAATCCATACTGATAGCGCATCAGTAGTTGCCTGGGGATGGCAGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR TCA 90 bp GGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTGACTTTCCACACAAATaGGGCTTTCCGTGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: GLKPRSPDSHATTMTGSADFPHK*GFPWVL
Trigger: CAAAACCCACGGAAAGCCTCATTTGTGTGGAAAGTC...AGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp ACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGCAGTTCTTAAGAGGTTCCTTTGCCTTCTaGGTGCCTGGATGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: TQFLLRFGFSAEAGQFLRGSFAF*VPGCPQ
Trigger: CTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACC...TCTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCATCAGTTTTGCACTaGGCAAGGAAGCACATGGGT +
Preference number: 4 (lower is better)
Translates to: REGLKPRSPDSHATTMTGSSVLH*ARKHMG
Trigger: ACCCATGTGCTTCCTTGCTCAGTGCAAAACTGATGA...GCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCCCTTTGGGGGACATCTaGTACGGAGAAGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: NQALRYNKPGKDLGRFPSPLGDI*YGEAEE
Trigger: CTCCTCTGCTTCTCCGTATCAGATGTCCCCCAAAGG...GGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535035.6
CDS-3UTR TCA 90 bp GGACCAGCTCGTAAGCAGTGCAGATGTGTTGGAACAGGCCGTACTTGTGGGATGGGCAAGAGAATCACTTaGACCCATGGAGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: GPARKQCRCVGTGRTCGMGKRIT*THGGCS
Trigger: ACTGCAACCTCCATGGGTTCAAGTGATTCTCTTGCC...CATCCCACAAGTACGGCCTGTTCCAACACATCTGCACTGCTTACGAGCTGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647912.1
CDS-3UTR GCA 90 bp GAAAGAAAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCATGTCCCGCACGCGCTaGTCGTGCAGGCGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: ERKRGMSGWRNQVDALFFMSRTR*SCRRGA
Trigger: CGCTCCGCGCCTGCACGAGCAGCGCGTGCGGGACAT...GAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTTTCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATGGAACTTTCTCTCCAGCTCGTAAGCAGTaGAGATGTGTTGGAACAGGC +
Preference number: 4 (lower is better)
Translates to: GKDLGRFPSLWNGNGTFSPARKQ*RCVGTG
Trigger: GCCTGTTCCAACACATCTGCACTGCTTACGAGCTGG...AGAGAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GGGAGGTTCCCTTCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTCAGCTTGCTGGGCTCTaGCTCATCTGTCATGACCCC +
Preference number: 4 (lower is better)
Translates to: GRFPSLWNGNGTFSELRIQLAGL*LICHDP
Trigger: GGGGTCATGACAGATGAGGCAGAGCCCAGCAAGCTG...AATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AGTTGCATAAACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGGGAGCTCCCAGAAGATaGTGCGCGTGTGGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: SCINNQALRYNKPGKDLGGAPRR*CACGGG
Trigger: ACCACCGCCACACGCGCAGCATCTTCTGGGAGCTCC...CCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTATGCAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTTGCACCACGTGGTGCTaGTCGTACAGCTTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: SFPYMTQFLLRFGFSAEACTTWC*SYSLRR
Trigger: CCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCA...AGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AGTAGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTACGCGGCTCCCCATATaGTCCAATGTCGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: SREGLKPRSPDSHATTMTTRLPI*SNVDVE
Trigger: CTCTACATCGACATTGGAGCATATGGGGAGCCGCGT...AGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATGGAAGCCATGCACGCTaGGGACAAACTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: YNKPGKDLGRFPSLWNGNGSHAR*GQTSPA
Trigger: AGCTGGAGAAGTTTGTCCGCAGCGTGCATGGCTTCC...ATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
CDS-3UTR GCA 90 bp AAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCTCCATTCCACTGGGCTaGCCCCTGGAAGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: KRGMSGWRNQVDALFFQPSIPLG*PLEARR
Trigger: CCTCCTGGCTTCCAGGGGGCAGCCCAGTGGAATGGA...GGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGCTGAACGGGAAGCAACAAGACTTTTCAGGCTCCACTaGAGATGTGACGCTGAACGG +
Preference number: 4 (lower is better)
Translates to: WSLFRLHCRCDAEREATRLFRLH*RCDAER
Trigger: CCGTTCAGCGTCACATCTGCAGTGGAGCCTGAAAAG...TCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGTGGGGAGTAAGGGCGACAGAGGCTaGTGGCATCTCTGGCCACCG +
Preference number: 4 (lower is better)
Translates to: SELRICKALKLTTAGVGSKGDRG*WHLWPP
Trigger: CGGTGGCCAGAGATGCCAGCAGCCTCTGTCGCCCTT...ACTCCCCACCCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GGATCCAATTCAGAGCGGAGACCACTCTCTCCACCTAGGTGTCCCAGGCTGAGGACTTTCCACATGCACTaGCCACTGGCATCAAGTTTA +
Preference number: 4 (lower is better)
Translates to: GSNSERRPLSPPRCPRLRTFHMH*PLASSL
Trigger: TAAACTTGATGCCAGTGGGCAGTGCATGTGGAAAGT...CCTCAGCCTGGGACACCTAGGTGGAGAGAGTGGTCTCCGCTCTGAATTGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGTCCATCTGGAGCAGTTaGCCCTGGACCCAGCTAAGC +
Preference number: 4 (lower is better)
Translates to: FPYMTQFLLRFGFSAEAGSIWSS*PWTQLS
Trigger: GCTTAGCTGGGTCCAGGGGCAACTGCTCCAGATGGA...CCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR CCA 90 bp GTGGGAGTTCTGGAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAACGAACACCCAGCGCTaGTGGATGAGCACGAACTCC +
Preference number: 4 (lower is better)
Translates to: VGVLEGFLFESVDLGKQPTNTQR*WMSTNS
Trigger: GGAGTTCGTGCTCATCCACCAGCGCTGGGTGTTCGT...TGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCCAGAACTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGCTCCAGGCCCCGCACTaGCTCGAAACGCAGCTTGAC +
Preference number: 4 (lower is better)
Translates to: SLWNGNGTFSELRICKALLQAPH*LETQLD
Trigger: GTCAAGCTGCGTTTCGAGCCAGTGCGGGGCCTGGAG...CAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCTCCAGGCCCCGCACTaGCTCGAAACGCAGCTTGAC +
Preference number: 4 (lower is better)
Translates to: KRGMSGWRNQVDALFFQPLQAPH*LETQLD
Trigger: GTCAAGCTGCGTTTCGAGCCAGTGCGGGGCCTGGAG...GGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTGGATTTTGGTTATATGACAGCCCTTCCACGAAGTaGTTCTCCTGCCGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PSFPSPGLWIRSGFWLYDSPSTK*FSCRWD
Trigger: GTCCCAGCGGCAGGAGAACCACTTCGTGGAAGGGCT...GTCATATAACCAAAATCCAGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCATGTCCTGCACCACGTaGTGCTGCTCGTACAGCTTG +
Preference number: 4 (lower is better)
Translates to: NQALRYNKPGKDLGRFPSMSCTT*CCSYSL
Trigger: CAAGCTGTACGAGCAGCACCACGTGGTGCAGGACAT...GGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGGCTGCAGGCACTTCATaGGCACCAGCATGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: FPYMTQFLLRFGFSAEAGAAGTS*APACPA
Trigger: TGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGC...CCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TTGCAACCACAGTGTCTAAGACAATCAGAAGGGTTCCAGGGAGGTCTTGTCTGTTGCACTAGGCCTGGCTaGCTGGGCAGGATGAACGGA +
Preference number: 4 (lower is better)
Translates to: LQPQCLRQSEGFQGGLVCCTRPG*LGRMNG
Trigger: TCCGTTCATCCTGCCCAGCCAGCCAGGCCTAGTGCA...ACAGACAAGACCTCCCTGGAACCCTTCTGATTGTCTTAGACACTGTGGTTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CAGATGTGTTGGAACAGGCCGTACTTGTGGGATGATGACTCGATGCCTGTGCCCGCCTCATGCAGGACCTaGCTTCAAAGTGTTTCACAC +
Preference number: 4 (lower is better)
Translates to: QMCWNRPYLWDDDSMPVPASCRT*LQSVSH
Trigger: GTGTGAAACACTTTGAAGCCAGGTCCTGCATGAGGC...GGGCACAGGCATCGAGTCATCATCCCACAAGTACGGCCTGTTCCAACACATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCGGCATACAGCATCTaGAAGCCATGCACGCTGCGG +
Preference number: 4 (lower is better)
Translates to: NNQALRYNKPGKDLGRFPSAYSI*KPCTLR
Trigger: CCGCAGCGTGCATGGCTTCCAGATGCTGTATGCCGA...AGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
CDS-3UTR CCA 90 bp GAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCATTCTCTCGCAGCTTGTaGTACAAGGAGCCATCAAAC +
Preference number: 4 (lower is better)
Translates to: EGLKPRSPDSHATTMTGSFSRSL*YKEPSN
Trigger: GTTTGATGGCTCCTTGTACCACAAGCTGCGAGAGAA...TGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GATGGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATTTCTCTCGCAGCTTGTaGTACAAGGAGCCATCAAAC +
Preference number: 4 (lower is better)
Translates to: DGGDGRATPAYPLHHSSHFSRSL*YKEPSN
Trigger: GTTTGATGGCTCCTTGTACCACAAGCTGCGAGAGAA...ATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCTCGGGGAAGGCGTCCTaGCAACCCAGCTTCTCTCGC +
Preference number: 4 (lower is better)
Translates to: KRGMSGWRNQVDALFFQPSGKAS*QPSFSR
Trigger: GCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGA...GGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGTTGCATAAACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGTCGGGGAAGGCGTCCTaGCAACCCAGCTTCTCTCGC +
Preference number: 4 (lower is better)
Translates to: SCINNQALRYNKPGKDLGSGKAS*QPSFSR
Trigger: GCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGA...CCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTATGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCAAGAAGAAGTTGGGCTGTCAGGGTaGGAGTTCTGGAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: TKWVLGKMRPAGLVSQEEVGLSG*EFWRGF
Trigger: GAAACCCCTCCAGAACTCCCACCCTGACAGCCCAAC...TTCTTCTTGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGGGAGGAAGGTGGTGTTaGGCTGTCAGGGTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: FPYMTQFLLRFGFSAEAGGGRWC*AVRVGV
Trigger: AACTCCCACCCTGACAGCCCAACACCACCTTCCTCC...CCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCTGACTCACACGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCTCATCATTCCAGCCATaGCTGTGCACAGGTGACCTA +
Preference number: 4 (lower is better)
Translates to: PDSHATTMTGSAPLIPASSSFQP*LCTGDL
Trigger: TAGGTCACCTGTGCACAGCCATGGCTGGAATGATGA...GGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGAAGCAACAAGAGCTACCACTTACCCAGCACCTTCAATGTGACCAGTGCTCAATGTGAGGACCTCGTCTaGCTGATGGAGGCGATGGCA +
Preference number: 4 (lower is better)
Translates to: GSNKSYHLPSTFNVTSAQCEDLV*LMEAMA
Trigger: TGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACA...TTGAGCACTGGTCACATTGAAGGTGCTGGGTAAGTGGTAGCTCTTGTTGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACCTTTGGCCTCGGACCTaGCTTTGGCACAGCGCATCT +
Preference number: 4 (lower is better)
Translates to: RGMSGWRNQVDALFFQPHLWPRT*LWHSAS
Trigger: AGATGCGCTGTGCCAAAGCCAGGTCCGAGGCCAAAG...GTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGGGACGGCACCAAGGATaGCAGGGAGAACTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: FPYMTQFLLRFGFSAEAGGRHQG*QGELWP
Trigger: AGGCCAAAGTTCTCCCTGCCATCCTTGGTGCCGTCC...CCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CACCCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTGGCCAAAGAAACTGGAGTGGACTCAGTGGTaGCTGGGGTGGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HPSLSVISKYSSFWPKKLEWTQW*LGWACR
Trigger: CCTGCAGGCCCACCCCAGCCACCACTGAGTCCACTC...CAGTTTCTTTGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGGTCTCACCCTAAAAAGAGGGATGAGTaGTTGGAGAAATCAAGTCGA +
Preference number: 4 (lower is better)
Translates to: ACPAPRGAARTACAGSHPKKRDE*LEKSSR
Trigger: TCGACTTGATTTCTCCAACCACTCATCCCTCTTTTT...AGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTTTTGAAAAAGAGGGATGAGTaGTTGGAGAAATCAAGTCGA +
Preference number: 4 (lower is better)
Translates to: APAAEQRGPTPTKTKWVLKKRDE*LEKSSR
Trigger: TCGACTTGATTTCTCCAACCACTCATCCCTCTTTTT...CAAAACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTAGGTTCCCTTCCCTCTaGAACGGAAATGGAACTTTC +
Preference number: 4 (lower is better)
Translates to: GLKPRSPDSHATTMTGSARFPSL*NGNGTF
Trigger: GAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCT...AGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTGACCTTACCCTGCTAAGACACTaGCAGTGTGCCAAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LPCKPGMSLSGNEMGADLTLLRH*QCAKPW
Trigger: CCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGT...AAGGTCAGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTCCTCCAGAGGCCAAATaGGTAGGGTGGTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: QMLPCKPGMSLSGNEMGAPPEAK*VGWFLC
Trigger: GCAAAGGAACCACCCTACCCATTTGGCCTCTGGAGG...AGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGCTGCTGGCATCTCTaGCCACCGTCCCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LSSLNSSFPYMTQFLLRFGCWHL*PPSQWL
Trigger: AAGCCACTGGGACGGTGGCCAGAGATGCCAGCAGCC...GAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACACAATTGGATAAGCTTGACACATGCATGCAACCAAGGACTCCAATCACTGCAGGCGACAGAGGCTGCTaGCATCTCTGGCCACCGTCC +
Preference number: 4 (lower is better)
Translates to: TQLDKLDTCMQPRTPITAGDRGC*HLWPPS
Trigger: GGACGGTGGCCAGAGATGCCAGCAGCCTCTGTCGCC...TGCAGTGATTGGAGTCCTTGGTTGCATGCATGTGTCAAGCTTATCCAATTGTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR CCA 90 bp CTAGGAAAGCAGCCAAGCTTGAGTGAAGGGAAGATGCCTGACCACTCACACGTGAAACCATCACATGGATaGCCAGGGACAGGACTGGCT +
Preference number: 4 (lower is better)
Translates to: LGKQPSLSEGKMPDHSHVKPSHG*PGTGLA
Trigger: AGCCAGTCCTGTCCCTGGCCATCCATGTGATGGTTT...CACGTGTGAGTGGTCAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTAGGAAAGCAGCCAAGCTTGAGTGAAGGGAAGATGCCTGACCACTCACACGTGAGAAACTCAGGGCTCTaGAGGGGAGAGCCTTACTCT +
Preference number: 4 (lower is better)
Translates to: LGKQPSLSEGKMPDHSHVRNSGL*RGEPYS
Trigger: AGAGTAAGGCTCTCCCCTCCAGAGCCCTGAGTTTCT...CACGTGTGAGTGGTCAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CACCAAGACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCAAGAAACTCAGGGCTCTaGAGGGGAGAGCCTTACTCT +
Preference number: 4 (lower is better)
Translates to: HQDKVGFGKDEACRVGEPRNSGL*RGEPYS
Trigger: AGAGTAAGGCTCTCCCCTCCAGAGCCCTGAGTTTCT...TGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGTCCCTAATGGAGCAGTaGGGTTGTTTTCCTTTAATC +
Preference number: 4 (lower is better)
Translates to: FSCEDLVWLMEAMAGQLQSLMEQ*GCFPLI
Trigger: GATTAAAGGAAAACAACCCCACTGCTCCATTAGGGA...CTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR TCA 90 bp GGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGCCCAGCGCTGGTGGATaGGCACGAACTCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GTFSELRICKALKLTTAGPSAGG*ARTPAP
Trigger: AGGGGCTGGAGTTCGTGCTCATCCACCAGCGCTGGG...CCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GAAAGAAAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCACGTAGTGAGACAGTaGGCCAGCCAGGGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: ERKRGMSGWRNQVDALFFHVVRQ*ASQGAP
Trigger: CGGGGCGCCCTGGCTGGCTCACTGTCTCACTACGTG...GAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTTTCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTGGCATAGAACAGGTCTaGGTTTTCGGACGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: QMLPCKPGMSLSGNEMGAGIEQV*VFGRSA
Trigger: TGCACTCCGTCCGAAAACTCAGACCTGTTCTATGCC...AGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGAACTTCTTGGCAGGGATaGTGCGGATCTCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: WLSSLNSSFPYMTQFLLRTSWQG*CGSQRP
Trigger: TGGCCGCTGAGATCCGCATCATCCCTGCCAAGAAGT...TCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GTAGTGTCTCAAGGGAATGTACTCCAGGCCCTCTCGGTTTGTCTTCAGATAGTTACTTCTTGGCAGGGATaGTGCGGATCTCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: VVSQGNVLQALSVCLQIVTSWQG*CGSQRP
Trigger: TGGCCGCTGAGATCCGCATCATCCCTGCCAAGAAGT...AACTATCTGAAGACAAACCGAGAGGGCCTGGAGTACATTCCCTTGAGACACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TCTGATTCTAAAGAAAACCTTCATGCAGCCAAGAAACTCAGGGCTCTGGAGGGGACTTCTTGGCAGGGATaGTGCGGATCTCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: SDSKENLHAAKKLRALEGTSWQG*CGSQRP
Trigger: TGGCCGCTGAGATCCGCATCATCCCTGCCAAGAAGT...CCCCTCCAGAGCCCTGAGTTTCTTGGCTGCATGAAGGTTTTCTTTAGAATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGGCTCGAAACGCAGCTTaGCGTACTTCTTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: FPYMTQFLLRFGFSAEAGARNAA*RTSWQG
Trigger: TCCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGC...CCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCACCAGCACCTTCAATGTaGCCAGTGCTCAACTCAGAT +
Preference number: 4 (lower is better)
Translates to: HCRCDAEREATRATTYPAPAPSM*PVLNSD
Trigger: ATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGG...TGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp ATCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCTTGAAGGAAGGATCTTaGATGACAGATAATCCCCAA +
Preference number: 4 (lower is better)
Translates to: ILSYTSGKASWQPSFSRSLKEGS*MTDNPQ
Trigger: TTGGGGATTATCTGTCATTCAAGATCCTTCCTTCAA...GCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGAGGTGTACGACAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTTGGATTTTGGTTATATaGCTAAGGGCGACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GLKPRSPDSHATTMTGSAWILVI*LRATEA
Trigger: AGCCTCTGTCGCCCTTAGTCATATAACCAAAATCCA...AGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AGTGTGGATCTAGGAAAGCAGCCAAGCTTGAGTGAAGGGAAGATGCCTGACCACGTGGCTGTAAGAGCCTaGCAGGGAAGATTCATGCCT +
Preference number: 4 (lower is better)
Translates to: SVDLGKQPSLSEGKMPDHVAVRA*QGRFMP
Trigger: AGGCATGAATCTTCCCTGTCAGGCTCTTACAGCCAC...GTGGTCAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCCTAGATCCACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR TCA 90 bp ACCCATCTCCACCCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTGGCCAACGGAACGCGAGGCGTaGGAGAAACCCAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: THLHPSLSVISKYSSFWPTEREA*EKPNCS
Trigger: TGAGCAGTTGGGTTTCTCTCACGCCTCGCGTTCCGT...TGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGGGTGGAGATGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR GCA 90 bp AGAAAGAAAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCGCGCGGTAAGCGCTaGGGGTTCGCGCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: RKKKRDEWLEKSSRCSFLPRGKR*GFAPPV
Trigger: GACAGGAGGCGCGAACCCGCAGCGCTTACCGCGCGG...AAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTTTCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AACTCCATCCAAAACCATCACATGGATGGCCAGGGACAGGACTGGCTACAAAAATTCCATTCCCGCACCTaGTTCTGGATGTCCCGCACG +
Preference number: 4 (lower is better)
Translates to: NSIQNHHMDGQGQDWLQKFHSRT*FWMSRT
Trigger: CGTGCGGGACATCCAGAAGCAGGTGCGGGAATGGAA...TTTTTGTAGCCAGTCCTGTCCCTGGCCATCCATGTGATGGTTTTGGATGGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GTAGTGTCTCAAGGGAATGTACTCCAGGCCCTCTCGGTTTGTCTTCAGATAGTTTTCCATTCCCGCACCTaGTTCTGGATGTCCCGCACG +
Preference number: 4 (lower is better)
Translates to: VVSQGNVLQALSVCLQIVFHSRT*FWMSRT
Trigger: CGTGCGGGACATCCAGAAGCAGGTGCGGGAATGGAA...AACTATCTGAAGACAAACCGAGAGGGCCTGGAGTACATTCCCTTGAGACACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AGTGTGGATCTAGGAAAGCAGCCAAGCTTGAGTGAAGGGAAGATGCCTGACCACCCAGCTCGTAAGCAGTaGAGATGTGTTGGAACAGGC +
Preference number: 4 (lower is better)
Translates to: SVDLGKQPSLSEGKMPDHPARKQ*RCVGTG
Trigger: GCCTGTTCCAACACATCTGCACTGCTTACGAGCTGG...GTGGTCAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCCTAGATCCACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACACCTGTAGTAATTGCCAATaGTATTCAGCTTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TLLRHWQCAKPWVGWVNTCSNCQ*YSACWA
Trigger: AGCCCAGCAAGCTGAATAGCATTGGCAATTACTACA...GGTGTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGTGTAGTAATTGCCAATaGTATTCAGCTTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AGQLQRIPFIIPAMAVHRCSNCQ*YSACWA
Trigger: AGCCCAGCAAGCTGAATAGCATTGGCAATTACTACA...CCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACACCACGGCTTGTAGTAATTaGCAATGCTATTCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: TLLRHWQCAKPWVGWVNTTACSN*QCYSAC
Trigger: GCAAGCTGAATAGCATTGGCAATTACTACAAGCCGT...GGTGTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAAGCTTGAGTGAAGCTCCCAGAAGATGCTaGGCGTGTGGCGGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: EGFLFESVDLGKQPSLSEAPRRC*ACGGGS
Trigger: ACTACCACCGCCACACGCGCAGCATCTTCTGGGAGC...TTCACTCAAGCTTGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCAAGGTGTGCAGGGCCTaGTGCAGGCACTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: KRGMSGWRNQVDALFFQPKVCRA*CRHFMG
Trigger: GCCCATGAAGTGCCTGCAGCAGGCCCTGCACACCTT...GGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATGGAACTTTCTCTGTCGATGTAGAGCTCTaGCTCATTTCCTTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GKDLGRFPSLWNGNGTFSVDVEL*LISFGV
Trigger: CACCCCAAAGGAAATGAGGCAGAGCTCTACATCGAC...AGAGAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCACGCGGCTCCCCATATaGTCCAATGTCGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: NQALRYNKPGKDLGRFPSTRLPI*SNVDVE
Trigger: CTCTACATCGACATTGGAGCATATGGGGAGCCGCGT...GGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCAGCATCTGGAAGCCATaGACGCTGCGGACAAACTTC +
Preference number: 4 (lower is better)
Translates to: NQALRYNKPGKDLGRFPSSIWKP*TLRTNF
Trigger: GAAGTTTGTCCGCAGCGTGCATGGCTTCCAGATGCT...GGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
CDS-3UTR GCA 90 bp GGGAGGTTCCCTTCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTAGTGCCTGGCGGCCTTaGAGATCTTGTCGTACACCT +
Preference number: 4 (lower is better)
Translates to: GRFPSLWNGNGTFSELRISAWRP*RSCRTP
Trigger: AGGTGTACGACAAGATCTGCAAGGCCGCCAGGCACT...AATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACAGTGCCTGGCGGCCTTaGAGATCTTGTCGTACACCT +
Preference number: 4 (lower is better)
Translates to: RGMSGWRNQVDALFFQPHSAWRP*RSCRTP
Trigger: AGGTGTACGACAAGATCTGCAAGGCCGCCAGGCACT...GTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CGTCCCAGTGGCTTAGGGTTGGAGGCTTCACTGGCAAAACAATGGCACTGTTTACTTTTCAGGCTCCACTaGAGATGTGACGCTGAACGG +
Preference number: 4 (lower is better)
Translates to: RPSGLGLEASLAKQWHCLLFRLH*RCDAER
Trigger: CCGTTCAGCGTCACATCTGCAGTGGAGCCTGAAAAG...TAAACAGTGCCATTGTTTTGCCAGTGAAGCCTCCAACCCTAAGCCACTGGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATCCCCACTCCGTGGCTaGCCTCCTGAGATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LWNGNGTFSELRICKALKSPLRG*PPEIPG
Trigger: CCCTGGGATCTCAGGAGGGCAGCCACGGAGTGGGGA...TTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CAAGAGCTACCACTTACCCAGCACCTTCAATGTGACCAGTGCTCAACTCAGATGCAGAGGACAATGACTTaGCCACGTTGCACAGCTCGC +
Preference number: 4 (lower is better)
Translates to: QELPLTQHLQCDQCSTQMQRTMT*PRCTAR
Trigger: GCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTG...CATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGGTAAGTGGTAGCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACCAGAGGACAATGACTTaGCCACGTTGCACAGCTCGC +
Preference number: 4 (lower is better)
Translates to: RGMSGWRNQVDALFFQPHQRTMT*PRCTAR
Trigger: GCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTG...GTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATGGAACTTTCTCTAGACAGATGCTTCCCTaGAAGCCAGGTATGAGCCTT +
Preference number: 4 (lower is better)
Translates to: GKDLGRFPSLWNGNGTFSRQMLP*KPGMSL
Trigger: AAGGCTCATACCTGGCTTGCAGGGAAGCATCTGTCT...AGAGAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCAAGAAGAAAAGACACTGGCAGTGTaGCAAGCCTTGGGTGGGATG +
Preference number: 4 (lower is better)
Translates to: TKWVLGKMRPAGLVSQEEKTLAV*QALGGM
Trigger: CATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTT...TTCTTCTTGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CAAGAGCTACCACTTACCCAGCACCTTCAATGTGACCAGTGCTCAACTCAGATGAAGACACTGGCAGTGTaGCAAGCCTTGGGTGGGATG +
Preference number: 4 (lower is better)
Translates to: QELPLTQHLQCDQCSTQMKTLAV*QALGGM
Trigger: CATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTT...CATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGGTAAGTGGTAGCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGCTGAAGTAGGGTGGTTCCTTTaGCTTCTGAGTGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: TGDLMWSLFRLHCRCDAEVGWFL*LLSAWM
Trigger: CATCCAGGCACTCAGAAGGCAAAGGAACCACCCTAC...TTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CACCCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTGGCCAAAGAAACTGAAGGGCGACAGAGGCTaGTGGCATCTCTGGCCACCG +
Preference number: 4 (lower is better)
Translates to: HPSLSVISKYSSFWPKKLKGDRG*WHLWPP
Trigger: CGGTGGCCAGAGATGCCAGCAGCCTCTGTCGCCCTT...CAGTTTCTTTGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCAGAGGCTGCCACAGCTaGAGGGGCCCTAAGGAACCA +
Preference number: 4 (lower is better)
Translates to: KRGMSGWRNQVDALFFQPRGCHS*RGPKEP
Trigger: TGGTTCCTTAGGGCCCCTGCAGCTGTGGCAGCCTCT...GGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR CCA 90 bp CTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCATCCCGCACCTGCTTCTaGATGTCCCGCACGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LNSSFPYMTQFLLRFGFSSRTCF*MSRTRC
Trigger: GCAGCGCGTGCGGGACATCCAGAAGCAGGTGCGGGA...TGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCCCCTGGATCCAATTCAGAGCGGAGACCACTCTCTCCACCTAGGTGTCCCAGGGGACAATCTGTTTCTTaGTGTCCACTTCCAGAATGT +
Preference number: 4 (lower is better)
Translates to: SPGSNSERRPLSPPRCPRGQSVS*CPLPEC
Trigger: ACATTCTGGAAGTGGACACCAAGAAACAGATTGTCC...CCTGGGACACCTAGGTGGAGAGAGTGGTCTCCGCTCTGAATTGGATCCAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371269.9
ENST00000535035.6
CDS-3UTR CCA 90 bp CACCCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTGGCCAAAGAAACTGAGCAGGGCAGTCACCTaGCCCATGGTCACCAAGGGC +
Preference number: 4 (lower is better)
Translates to: HPSLSVISKYSSFWPKKLSRAVT*PMVTKG
Trigger: GCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCT...CAGTTTCTTTGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTGTGCACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACAACAGGCCGTACTTGTaGGATGATGACTCGATGCCT +
Preference number: 4 (lower is better)
Translates to: LCTGDLMWSLFRLHCRCDNRPYL*DDDSMP
Trigger: AGGCATCGAGTCATCATCCCACAAGTACGGCCTGTT...GTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGTGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTTGCCGCTGGGACTCGTaGGTGAACTTGGCACAGATA +
Preference number: 4 (lower is better)
Translates to: GCDSKIPSFPSPGLWIRSCRWDS*VNLAQI
Trigger: TATCTGTGCCAAGTTCACCCACGAGTCCCAGCGGCA...AGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACAAGACAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGTGGTTCTCCTGCCGCTaGGACTCGTGGGTGAACTTG +
Preference number: 4 (lower is better)
Translates to: TRQMLPCKPGMSLSGNEMWFSCR*DSWVNL
Trigger: CAAGTTCACCCACGAGTCCCAGCGGCAGGAGAACCA...CATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTGTCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGTGGGGAGTAGCCCTTCCACGAAGTaGTTCTCCTGCCGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SELRICKALKLTTAGVGSSPSTK*FSCRWD
Trigger: GTCCCAGCGGCAGGAGAACCACTTCGTGGAAGGGCT...ACTCCCCACCCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACCCATCTCCACCCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTGGCCAGCTGCAGGCACTTCATaGGCACCAGCATGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: THLHPSLSVISKYSSFWPAAGTS*APACPA
Trigger: TGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGC...TGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGGGTGGAGATGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACACGGACACAGCCAGATaGGGTAGACGTGGATGTCGT +
Preference number: 4 (lower is better)
Translates to: RGMSGWRNQVDALFFQPHTDTAR*GRRGCR
Trigger: ACGACATCCACGTCTACCCCATCTGGCTGTGTCCGT...GTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGAAGCAACAAGAGCTACCACTTACCCAGCACCTTCAATGTGACCAGTGCTCAACTGCCTCATTTCCTTTaGGGTGCACTAGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GSNKSYHLPSTFNVTSAQLPHFL*GALGLA
Trigger: AGCCAGGCCTAGTGCACCCCAAAGGAAATGAGGCAG...TTGAGCACTGGTCACATTGAAGGTGCTGGGTAAGTGGTAGCTCTTGTTGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGTGAGCTGCCTCATTTCCTTTaGGGTGCACTAGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: MSGWRNQVDALFFQPHGELPHFL*GALGLA
Trigger: AGCCAGGCCTAGTGCACCCCAAAGGAAATGAGGCAG...CTCACCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CACCAAGACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCAGCCTCATGCAGGACCTaGCTTCAAAGTGTTTCACAC +
Preference number: 4 (lower is better)
Translates to: HQDKVGFGKDEACRVGEPASCRT*LQSVSH
Trigger: GTGTGAAACACTTTGAAGCCAGGTCCTGCATGAGGC...TGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TTGCAACCACAGTGTCTAAGACAATCAGAAGGGTTCCAGGGAGGTCTTGTCTGTTCGGCATACAGCATCTaGAAGCCATGCACGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LQPQCLRQSEGFQGGLVCSAYSI*KPCTLR
Trigger: CCGCAGCGTGCATGGCTTCCAGATGCTGTATGCCGA...ACAGACAAGACCTCCCTGGAACCCTTCTGATTGTCTTAGACACTGTGGTTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
CDS-3UTR CCA 90 bp ACAAGACAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGTCGGCATACAGCATCTaGAAGCCATGCACGCTGCGG +
Preference number: 4 (lower is better)
Translates to: TRQMLPCKPGMSLSGNEMSAYSI*KPCTLR
Trigger: CCGCAGCGTGCATGGCTTCCAGATGCTGTATGCCGA...CATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTGTCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
CDS-3UTR CCA 90 bp AGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTCTCCAGCTCAGTGCCTaGCGGCCTTGCAGATCTTGT +
Preference number: 4 (lower is better)
Translates to: SFPYMTQFLLRFGFSAEALQLSA*RPCRSC
Trigger: ACAAGATCTGCAAGGCCGCCAGGCACTGAGCTGGAG...AGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCTGATTCTAAAGAAAACCTTCATGCAGCCAAGAAACTCAGGGCTCTGGAGGGGCTCCAGCTCAGTGCCTaGCGGCCTTGCAGATCTTGT +
Preference number: 4 (lower is better)
Translates to: SDSKENLHAAKKLRALEGLQLSA*RPCRSC
Trigger: ACAAGATCTGCAAGGCCGCCAGGCACTGAGCTGGAG...CCCCTCCAGAGCCCTGAGTTTCTTGGCTGCATGAAGGTTTTCTTTAGAATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGAGTTGGGCTGTCAGGGTaGGAGTTCTGGAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: WLSSLNSSFPYMTQFLLRVGLSG*EFWRGF
Trigger: GAAACCCCTCCAGAACTCCCACCCTGACAGCCCAAC...TCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGAAAGCCAGGAGGAAGGTaGTGTTGGGCTGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: WLSSLNSSFPYMTQFLLRKPGGR*CWAVRV
Trigger: CACCCTGACAGCCCAACACCACCTTCCTCCTGGCTT...TCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGAAGCAACAAGAGCTACCACTTACCCAGCACCTTCAATGTGACCAGTGCTCAATTCTTTCCATTCCACTaGGCTGCCCCCTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: GSNKSYHLPSTFNVTSAQFFPFH*AAPWKP
Trigger: TGGCTTCCAGGGGGCAGCCCAGTGGAATGGAAAGAA...TTGAGCACTGGTCACATTGAAGGTGCTGGGTAAGTGGTAGCTCTTGTTGCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GTGGGAGTTCTGGAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCATTCTTTCCATTCCACTaGGCTGCCCCCTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: VGVLEGFLFESVDLGKQPFFPFH*AAPWKP
Trigger: TGGCTTCCAGGGGGCAGCCCAGTGGAATGGAAAGAA...TGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCCAGAACTCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCAACAGGTGACCTAATGTaGAGCCTTTTCAGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: HCRCDAEREATRATTYPATGDLM*SLFRLH
Trigger: GTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGT...TGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTTGTGAGGACCTCGTCTaGCTGATGGAGGCGATGGCA +
Preference number: 4 (lower is better)
Translates to: SFPYMTQFLLRFGFSAEACEDLV*LMEAMA
Trigger: TGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACA...AGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCTGATTCTAAAGAAAACCTTCATGCAGCCAAGAAACTCAGGGCTCTGGAGGGGTGGCAGGGAGAACTTTaGCCTCGGACCTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SDSKENLHAAKKLRALEGWQGEL*PRTWLW
Trigger: CCAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCA...CCCCTCCAGAGCCCTGAGTTTCTTGGCTGCATGAAGGTTTTCTTTAGAATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACCCATCTCCACCCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTGGCCATGGCAGGGAGAACTTTaGCCTCGGACCTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: THLHPSLSVISKYSSFWPWQGEL*PRTWLW
Trigger: CCAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCA...TGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGGGTGGAGATGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AAAGAGGTAGCGGAAGATGGGGTTGTTGCCAAAGGGGATAATGTCCTGGAGCTCCGCCACAACCATGACTaGCTCAGCTCCCTTAATTCC +
Preference number: 4 (lower is better)
Translates to: KEVAEDGVVAKGDNVLELRHNHD*LSSLNS
Trigger: GGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG...GAGCTCCAGGACATTATCCCCTTTGGCAACAACCCCATCTTCCGCTACCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCATCCCCAAGTGTCCACTaGATCATTTTTCCTCTGACT +
Preference number: 4 (lower is better)
Translates to: EGLKPRSPDSHATTMTGSSPSVH*IIFPLT
Trigger: AGTCAGAGGAAAAATGATCCAGTGGACACTTGGGGA...TGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GTGGGAGTTCTGGAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCACCTCCAGAGGCCAAATaGGTAGGGTGGTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: VGVLEGFLFESVDLGKQPPPEAK*VGWFLC
Trigger: GCAAAGGAACCACCCTACCCATTTGGCCTCTGGAGG...TGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCCAGAACTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGAAGCAACAAGAGCTACCACTTACCCAGCACCTTCAATGTGACCAGTGCTCAACCTCCAGAGGCCAAATaGGTAGGGTGGTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: GSNKSYHLPSTFNVTSAQPPEAK*VGWFLC
Trigger: GCAAAGGAACCACCCTACCCATTTGGCCTCTGGAGG...TTGAGCACTGGTCACATTGAAGGTGCTGGGTAAGTGGTAGCTCTTGTTGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTGTGCACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACTCCAAAACCATCACATaGATGGCCAGGGACAGGACT +
Preference number: 4 (lower is better)
Translates to: LCTGDLMWSLFRLHCRCDSKTIT*MARDRT
Trigger: AGTCCTGTCCCTGGCCATCCATGTGATGGTTTTGGA...GTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGTGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGCTGAACGGGAAGCAACAAGATCCAAAACCATCACATaGATGGCCAGGGACAGGACT +
Preference number: 4 (lower is better)
Translates to: WSLFRLHCRCDAEREATRSKTIT*MARDRT
Trigger: AGTCCTGTCCCTGGCCATCCATGTGATGGTTTTGGA...TCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATGGAACTTTCTCTTCCAAAACCATCACATaGATGGCCAGGGACAGGACT +
Preference number: 4 (lower is better)
Translates to: GKDLGRFPSLWNGNGTFSSKTIT*MARDRT
Trigger: AGTCCTGTCCCTGGCCATCCATGTGATGGTTTTGGA...AGAGAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTTTGGCCTTTCCATCTaGAGCAGTTGCCCCTGGACC +
Preference number: 4 (lower is better)
Translates to: NNQALRYNKPGKDLGRFPFGLSI*SSCPWT
Trigger: GGTCCAGGGGCAACTGCTCCAGATGGAAAGGCCAAA...AGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR TCA 90 bp AAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCACTTCTTGGCAGGGATaGTGCGGATCTCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: KRGMSGWRNQVDALFFQPTSWQG*CGSQRP
Trigger: TGGCCGCTGAGATCCGCATCATCCCTGCCAAGAAGT...GGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTGAAAGCAGCCAAGCTTaGGTGAAGGGAAGATGCCTG +
Preference number: 4 (lower is better)
Translates to: NNQALRYNKPGKDLGRFPESSQA*VKGRCL
Trigger: CAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTC...AGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AGTGTGGATCTAGGAAAGCAGCCAAGCTTGAGTGAAGGGAAGATGCCTGACCACGGACTCAGGCTTGTCTaGCTCCAAATCCCACATTCT +
Preference number: 4 (lower is better)
Translates to: SVDLGKQPSLSEGKMPDHGLRLV*LQIPHS
Trigger: AGAATGTGGGATTTGGAGTCAGACAAGCCTGAGTCC...GTGGTCAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCCTAGATCCACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATGGACTCAGGCTTGTCTaGCTCCAAATCCCACATTCT +
Preference number: 4 (lower is better)
Translates to: YNKPGKDLGRFPSLWNGNGLRLV*LQIPHS
Trigger: AGAATGTGGGATTTGGAGTCAGACAAGCCTGAGTCC...ATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGCCAGCACCTTCAATGTaGCCAGTGCTCAACTCAGAT +
Preference number: 4 (lower is better)
Translates to: RDEWLEKSSRCSFLPAPRPAPSM*PVLNSD
Trigger: ATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGG...CCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAAGCTTGAGTGAAGTGAGCCAAGAAGAATaGGCCCAGGTCCCCTGGATC +
Preference number: 4 (lower is better)
Translates to: EGFLFESVDLGKQPSLSEVSQEE*AQVPWI
Trigger: GATCCAGGGGACCTGGGCTCATTCTTCTTGGCTCAC...TTCACTCAAGCTTGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTGACCTTATTCGGGTTTTCAGCTaGGGCTGGGCAGTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: LPCKPGMSLSGNEMGADLIRVFS*GWAVLK
Trigger: CTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAAT...AAGGTCAGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGATTCGGGTTTTCAGCTaGGGCTGGGCAGTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: RDEWLEKSSRCSFLPAPRIRVFS*GWAVLK
Trigger: CTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAAT...CCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CGTCCCAGTGGCTTAGGGTTGGAGGCTTCACTGGCAAAACAATGGCACTGTTTAATTCGGGTTTTCAGCTaGGGCTGGGCAGTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: RPSGLGLEASLAKQWHCLIRVFS*GWAVLK
Trigger: CTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAAT...TAAACAGTGCCATTGTTTTGCCAGTGAAGCCTCCAACCCTAAGCCACTGGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AGTGTGGATCTAGGAAAGCAGCCAAGCTTGAGTGAAGGGAAGATGCCTGACCACCCTGCAAGCCAGGTATaGGCCTTTCTGGAAATGAGA +
Preference number: 4 (lower is better)
Translates to: SVDLGKQPSLSEGKMPDHPASQV*AFLEMR
Trigger: TCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGG...GTGGTCAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCCTAGATCCACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATTTCTGGCACCTGGAATaGCAAGACAGATGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: YNKPGKDLGRFPSLWNGNFWHLE*QDRCFP
Trigger: AGGGAAGCATCTGTCTTGTCATTCCAGGTGCCAGAA...ATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp ACCTGGCTTCAAAGTGTTTCACACGCGGCTCCCCATATGCTCCAATGTCGATGTTTCTGGCACCTGGAATaGCAAGACAGATGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: TWLQSVSHAAPHMLQCRCFWHLE*QDRCFP
Trigger: AGGGAAGCATCTGTCTTGTCATTCCAGGTGCCAGAA...ACATCGACATTGGAGCATATGGGGAGCCGCGTGTGAAACACTTTGAAGCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GGAGTTCTGGAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAAGCCTTGGGTGGGATGGGTaGACACCCTTCAATGACTCT +
Preference number: 4 (lower is better)
Translates to: GVLEGFLFESVDLGKQPSLGWDG*TPFNDS
Trigger: AGAGTCATTGAAGGGTGTTCACCCATCCCACCCAAG...GCTTGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCCAGAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CTGTGCACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACCACATGGGTCTCCTATaGGAGCTAATGCCAGAATTC +
Preference number: 4 (lower is better)
Translates to: LCTGDLMWSLFRLHCRCDHMGLL*ELMPEF
Trigger: GAATTCTGGCATTAGCTCTCATAGGAGACCCATGTG...GTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGTGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp ATCTGTCATGACCCCTGTCATAATGACAGCCTCATCCAGGGAGTAGAGCAGCCCTCATCAGTTTTGCACTaGGCAAGGAAGCACATGGGT +
Preference number: 4 (lower is better)
Translates to: ICHDPCHNDSLIQGVEQPSSVLH*ARKHMG
Trigger: ACCCATGTGCTTCCTTGCTCAGTGCAAAACTGATGA...GGGCTGCTCTACTCCCTGGATGAGGCTGTCATTATGACAGGGGTCATGACAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CTTCAGGAGGGAGATCTTGGGAGGCACCATCCAGCCAAAGAGGTAGCGGAAGATCATAACCGGAGGGTGTaGTTCCAAAATACCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LQEGDLGRHHPAKEVAEDHNRRV*FQNTFL
Trigger: AAGGAAGGTATTTTGGAATCACACCCTCCGGTTATG...ATCTTCCGCTACCTCTTTGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGCAATGCTATTCAGCTTaGTGGGCTCTGCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: RDEWLEKSSRCSFLPAPRQCYSA*WALPHL
Trigger: CAGATGAGGCAGAGCCCAGCAAGCTGAATAGCATTG...CCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCACGGCTTGTAGTAATTaGCAATGCTATTCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: REGLKPRSPDSHATTMTGTACSN*QCYSAC
Trigger: GCAAGCTGAATAGCATTGGCAATTACTACAAGCCGT...GCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTGTGCACAGGTGACCACGGCTTGTAGTAATTaGCAATGCTATTCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: ATPAYPLHHSSHGCAQVTTACSN*QCYSAC
Trigger: GCAAGCTGAATAGCATTGGCAATTACTACAAGCCGT...GGTCACCTGTGCACAGCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAAGTGTGCAGGGCCTGCTaGAGGCACTTCATGGGCACC +
Preference number: 4 (lower is better)
Translates to: LWNGNGTFSELRICKALKVCRAC*RHFMGT
Trigger: GGTGCCCATGAAGTGCCTGCAGCAGGCCCTGCACAC...TTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGCAGTTCTTAAGAGGAAGCCATGCACGCTaGGGACAAACTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TQFLLRFGFSAEAGQFLRGSHAR*GQTSPA
Trigger: AGCTGGAGAAGTTTGTCCGCAGCGTGCATGGCTTCC...TCTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
CDS-3UTR GCA 90 bp ACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCAAGAAGAAAGCATCTGGAAGCCATaGACGCTGCGGACAAACTTC +
Preference number: 4 (lower is better)
Translates to: TKWVLGKMRPAGLVSQEESIWKP*TLRTNF
Trigger: GAAGTTTGTCCGCAGCGTGCATGGCTTCCAGATGCT...TTCTTCTTGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
CDS-3UTR GCA 90 bp GGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTCTTTTCAGGCTCCACTaGAGATGTGACGCTGAACGG +
Preference number: 4 (lower is better)
Translates to: GCDSKIPSFPSPGLWIRSLFRLH*RCDAER
Trigger: CCGTTCAGCGTCACATCTGCAGTGGAGCCTGAAAAG...AGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AACTCCATCCAAAACCATCACATGGATGGCCAGGGACAGGACTGGCTACAAAAAGGGAAAGATGAGGCCTaGAGGGTTGGTGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: NSIQNHHMDGQGQDWLQKGKDEA*RVGEPR
Trigger: TCTTGGCTCACCAACCCTGCAGGCCTCATCTTTCCC...TTTTTGTAGCCAGTCCTGTCCCTGGCCATCCATGTGATGGTTTTGGATGGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGACGAACACCCAGCGCTaGTGGATGAGCACGAACTCC +
Preference number: 4 (lower is better)
Translates to: SLWNGNGTFSELRICKALTNTQR*WMSTNS
Trigger: GGAGTTCGTGCTCATCCACCAGCGCTGGGTGTTCGT...CAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GATGGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGACAATCTGTTTCTTaGTGTCCACTTCCAGAATGT +
Preference number: 4 (lower is better)
Translates to: DGGDGRATPAYPLHHSSHGQSVS*CPLPEC
Trigger: ACATTCTGGAAGTGGACACCAAGAAACAGATTGTCC...ATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371269.9
ENST00000535035.6
CDS-3UTR CCA 90 bp CTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAAAGCAGGGCAGTCACCTaGCCCATGGTCACCAAGGGC +
Preference number: 4 (lower is better)
Translates to: LWNGNGTFSELRICKALKSRAVT*PMVTKG
Trigger: GCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCT...TTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCGGAGAGTCCAGCCAATaGAGGTCAGCAGGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: KRGMSGWRNQVDALFFQPGESSQ*RSAGQS
Trigger: TGACTGCCCTGCTGACCTCCATTGGCTGGACTCTCC...GGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGAGAGTCCAGCCAATaGAGGTCAGCAGGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: LSSLNSSFPYMTQFLLRFGESSQ*RSAGQS
Trigger: TGACTGCCCTGCTGACCTCCATTGGCTGGACTCTCC...GAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGTGTGGATCTAGGAAAGCAGCCAAGCTTGAGTGAAGGGAAGATGCCTGACCACAACAGGCCGTACTTGTaGGATGATGACTCGATGCCT +
Preference number: 4 (lower is better)
Translates to: SVDLGKQPSLSEGKMPDHNRPYL*DDDSMP
Trigger: AGGCATCGAGTCATCATCCCACAAGTACGGCCTGTT...GTGGTCAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCCTAGATCCACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGAGTTCTGGAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAAGCGCAGTGCAGATGTGTTaGAACAGGCCGTACTTGTGG +
Preference number: 4 (lower is better)
Translates to: GVLEGFLFESVDLGKQPSAVQMC*NRPYLW
Trigger: CCACAAGTACGGCCTGTTCCAACACATCTGCACTGC...GCTTGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCCAGAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATAAGGGGATAATGTCCTaGAGCTCCCAGAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: YNKPGKDLGRFPSLWNGNKGIMS*SSQKML
Trigger: CAGCATCTTCTGGGAGCTCCAGGACATTATCCCCTT...ATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACCGGAGGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAAAGGGGATAATGTCCTaGAGCTCCCAGAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: TGGCDSKIPSFPSPGLWIKGIMS*SSQKML
Trigger: CAGCATCTTCTGGGAGCTCCAGGACATTATCCCCTT...TATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCCTCCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371269.9
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGTGAGAGAGGTAGCGGAAGATaGGGTTGTTGCCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: MSGWRNQVDALFFQPHGERGSGR*GCCQRG
Trigger: TCCCCTTTGGCAACAACCCCATCTTCCGCTACCTCT...CTCACCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTGGATTTTGGTTATATGACTCAGGAGGGAGATCTTaGGAGGCACCATCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: PSFPSPGLWIRSGFWLYDSGGRS*EAPSSQ
Trigger: TTGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGA...GTCATATAACCAAAATCCAGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGCGCAGGGTCTCACCCTaGGTCAGCTTCAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GTFSELRICKALKLTTAGRRVSP*VSFRRE
Trigger: CTCCCTCCTGAAGCTGACCCAGGGTGAGACCCTGCG...CCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGCAGTTCTTAAGAATGTCCTGCACCACGTaGTGCTGCTCGTACAGCTTG +
Preference number: 4 (lower is better)
Translates to: TQFLLRFGFSAEAGQFLRMSCTT*CCSYSL
Trigger: CAAGCTGTACGAGCAGCACCACGTGGTGCAGGACAT...TCTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GTAGTGTCTCAAGGGAATGTACTCCAGGCCCTCTCGGTTTGTCTTCAGATAGTTATGTCCTGCACCACGTaGTGCTGCTCGTACAGCTTG +
Preference number: 4 (lower is better)
Translates to: VVSQGNVLQALSVCLQIVMSCTT*CCSYSL
Trigger: CAAGCTGTACGAGCAGCACCACGTGGTGCAGGACAT...AACTATCTGAAGACAAACCGAGAGGGCCTGGAGTACATTCCCTTGAGACACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGCAGTTCTTAAGAACGTGGATGTCGTTTTaGAAGGTGTGCAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: TQFLLRFGFSAEAGQFLRTWMSF*KVCRAC
Trigger: GCAGGCCCTGCACACCTTCCAAAACGACATCCACGT...TCTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTACGGACACAGCCAGATaGGGTAGACGTGGATGTCGT +
Preference number: 4 (lower is better)
Translates to: SFPYMTQFLLRFGFSAEATDTAR*GRRGCR
Trigger: ACGACATCCACGTCTACCCCATCTGGCTGTGTCCGT...AGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTCTGCCTCATTTCCTTTaGGGTGCACTAGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SFPYMTQFLLRFGFSAEALPHFL*GALGLA
Trigger: AGCCAGGCCTAGTGCACCCCAAAGGAAATGAGGCAG...AGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTGACCTTGCCTCATGCAGGACCTaGCTTCAAAGTGTTTCACAC +
Preference number: 4 (lower is better)
Translates to: LPCKPGMSLSGNEMGADLASCRT*LQSVSH
Trigger: GTGTGAAACACTTTGAAGCCAGGTCCTGCATGAGGC...AAGGTCAGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATGGAACTTTCTCTTTCTCTCGCAGCTTGTaGTACAAGGAGCCATCAAAC +
Preference number: 4 (lower is better)
Translates to: GKDLGRFPSLWNGNGTFSFSRSL*YKEPSN
Trigger: GTTTGATGGCTCCTTGTACCACAAGCTGCGAGAGAA...AGAGAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGTTGCATAAACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGCTCCAGCTCAGTGCCTaGCGGCCTTGCAGATCTTGT +
Preference number: 4 (lower is better)
Translates to: SCINNQALRYNKPGKDLGLQLSA*RPCRSC
Trigger: ACAAGATCTGCAAGGCCGCCAGGCACTGAGCTGGAG...CCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTATGCAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCATCAGGGTGGGAGTTCTaGAGGGGTTTCTCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: HCRCDAEREATRATTYPASGWEF*RGFSLK
Trigger: TTTCAAAGAGAAACCCCTCCAGAACTCCCACCCTGA...TGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGTGGGGAGTCTTTGGCCTCGGACCTaGCTTTGGCACAGCGCATCT +
Preference number: 4 (lower is better)
Translates to: SELRICKALKLTTAGVGSLWPRT*LWHSAS
Trigger: AGATGCGCTGTGCCAAAGCCAGGTCCGAGGCCAAAG...ACTCCCCACCCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCGGACGGCACCAAGGATaGCAGGGAGAACTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: KRGMSGWRNQVDALFFQPGRHQG*QGELWP
Trigger: AGGCCAAAGTTCTCCCTGCCATCCTTGGTGCCGTCC...GGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAACAGGGCACTCCGAGTaGACTCAGTGGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LNSSFPYMTQFLLRFGFSTGHSE*TQWWLG
Trigger: CCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGT...TGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCAAGAAGAACGCCACAACCATGACTaGCTCAGCTCCCTTAATTCC +
Preference number: 4 (lower is better)
Translates to: TKWVLGKMRPAGLVSQEERHNHD*LSSLNS
Trigger: GGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG...TTCTTCTTGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTGACCTTGCCAAATGGGTAGGGTaGTTCCTTTGCCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LPCKPGMSLSGNEMGADLAKWVG*FLCLLS
Trigger: ACTCAGAAGGCAAAGGAACCACCCTACCCATTTGGC...AAGGTCAGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCGCCAAATGGGTAGGGTaGTTCCTTTGCCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: NQALRYNKPGKDLGRFPSAKWVG*FLCLLS
Trigger: ACTCAGAAGGCAAAGGAACCACCCTACCCATTTGGC...GGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGGCTGCTGGCATCTCTaGCCACCGTCCCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: GTFSELRICKALKLTTAGGCWHL*PPSQWL
Trigger: AAGCCACTGGGACGGTGGCCAGAGATGCCAGCAGCC...CCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGAGTTCTGGAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAAGCCCAAGCCCCGGGTTGTaGATAAGGTCTGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: GVLEGFLFESVDLGKQPSPSPGL*IRSGFW
Trigger: CCAAAATCCAGACCTTATCCACAACCCGGGGCTTGG...GCTTGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCCAGAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACCCAGCACCTTCAATGTGACCAGTGCTCAACTCAGATGACAACAACCTGCAAGAAACCATCACATGGATaGCCAGGGACAGGACTGGCT +
Preference number: 4 (lower is better)
Translates to: TQHLQCDQCSTQMTTTCKKPSHG*PGTGLA
Trigger: AGCCAGTCCTGTCCCTGGCCATCCATGTGATGGTTT...CTTGCAGGTTGTTGTCATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGTGAGAGAAACTCAGGGCTCTaGAGGGGAGAGCCTTACTCT +
Preference number: 4 (lower is better)
Translates to: MSGWRNQVDALFFQPHGERNSGL*RGEPYS
Trigger: AGAGTAAGGCTCTCCCCTCCAGAGCCCTGAGTTTCT...CTCACCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGATCCAATTCAGAGCGGAGACCACTCTCTCCACCTAGGTGTCCCAGGCTGAGGAAGTATTCATCCTTCTaGCCAAAGAAACTGGCTACA +
Preference number: 4 (lower is better)
Translates to: GSNSERRPLSPPRCPRLRKYSSF*PKKLAT
Trigger: TGTAGCCAGTTTCTTTGGCCAGAAGGATGAATACTT...CCTCAGCCTGGGACACCTAGGTGGAGAGAGTGGTCTCCGCTCTGAATTGGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CGTCCCAGTGGCTTAGGGTTGGAGGCTTCACTGGCAAAACAATGGCACTGTTTAGGGATAATGTCCCTTTaGGGGACATCTGATACGGAG +
Preference number: 4 (lower is better)
Translates to: RPSGLGLEASLAKQWHCLGIMSL*GTSDTE
Trigger: CTCCGTATCAGATGTCCCCCAAAGGGACATTATCCC...TAAACAGTGCCATTGTTTTGCCAGTGAAGCCTCCAACCCTAAGCCACTGGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535035.6
CDS-3UTR CCA 90 bp ATCATCAGTTTTGCACTGAGCAAGGAAGCACATGGGTCTCCTATGAGAGCTAATTTCTGCCCCTCTGCTTaGCCAGAGGCACAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: IISFALSKEAHGSPMRANFCPSA*PEAQLP
Trigger: AGGCAGCTGTGCCTCTGGCCAAGCAGAGGGGCAGAA...ATTAGCTCTCATAGGAGACCCATGTGCTTCCTTGCTCAGTGCAAAACTGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR TCA 90 bp ACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGCAGTTCTTAAGAGGCATAGAACAGGTCTaGGTTTTCGGACGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: TQFLLRFGFSAEAGQFLRGIEQV*VFGRSA
Trigger: TGCACTCCGTCCGAAAACTCAGACCTGTTCTATGCC...TCTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGAGGCATAGAACAGGTCTaGGTTTTCGGACGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: WLSSLNSSFPYMTQFLLRGIEQV*VFGRSA
Trigger: TGCACTCCGTCCGAAAACTCAGACCTGTTCTATGCC...TCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTGGACTCAGGCTTGTCTaGCTCCAAATCCCACATTCT +
Preference number: 4 (lower is better)
Translates to: NNQALRYNKPGKDLGRFPGLRLV*LQIPHS
Trigger: AGAATGTGGGATTTGGAGTCAGACAAGCCTGAGTCC...AGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp ATCATCAGTTTTGCACTGAGCAAGGAAGCACATGGGTCTCCTATGAGAGCTAATGTGAGCCAAGAAGAATaGGCCCAGGTCCCCTGGATC +
Preference number: 4 (lower is better)
Translates to: IISFALSKEAHGSPMRANVSQEE*AQVPWI
Trigger: GATCCAGGGGACCTGGGCTCATTCTTCTTGGCTCAC...ATTAGCTCTCATAGGAGACCCATGTGCTTCCTTGCTCAGTGCAAAACTGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGCTCCACTTTCCCACCTaGTGCTGTCCACTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GTFSELRICKALKLTTAGLHFPT*CCPLPS
Trigger: GCTGGGGAGTGGACAGCATCAGGTGGGAAAGTGGAG...CCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGCCAGCTTCCCTTACATaGCGCAATTCCTTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: RDEWLEKSSRCSFLPAPRPASLT*RNSFSD
Trigger: ATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGG...CCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTGGATTTTGGTTATATGACACAGTAGAGAGGGGCTaGAACCTAGGTCTCCTGACT +
Preference number: 4 (lower is better)
Translates to: PSFPSPGLWIRSGFWLYDTVERG*NLGLLT
Trigger: AGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACTGT...GTCATATAACCAAAATCCAGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AAAGAGGTAGCGGAAGATGGGGTTGTTGCCAAAGGGGATAATGTCCTGGAGCTCGACTTTCCACACAAATaGGGCTTTCCGTGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: KEVAEDGVVAKGDNVLELDFPHK*GFPWVL
Trigger: CAAAACCCACGGAAAGCCTCATTTGTGTGGAAAGTC...GAGCTCCAGGACATTATCCCCTTTGGCAACAACCCCATCTTCCGCTACCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTGACTTTCCACACAAATaGGGCTTTCCGTGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: QMLPCKPGMSLSGNEMGADFPHK*GFPWVL
Trigger: CAAAACCCACGGAAAGCCTCATTTGTGTGGAAAGTC...AGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AGTCGGCATACAGCATCTGGAAGCCATGCACGCTGCGGACAAACTTCTCCAGCTAGGAAGGATCTTGAATaGCAGATAATCCCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: SRHTASGSHARCGQTSPARKDLE*QIIPKC
Trigger: ACACTTGGGGATTATCTGTCATTCAAGATCCTTCCT...AGCTGGAGAAGTTTGTCCGCAGCGTGCATGGCTTCCAGATGCTGTATGCCGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000648728.1
CDS-3UTR TCA 90 bp GGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTTTGAAGGAAGGATCTTaGATGACAGATAATCCCCAA +
Preference number: 4 (lower is better)
Translates to: GLKPRSPDSHATTMTGSALKEGS*MTDNPQ
Trigger: TTGGGGATTATCTGTCATTCAAGATCCTTCCTTCAA...AGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp ACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGCTGAACACATGGGTCTCCTATaGGAGCTAATGCCAGAATTC +
Preference number: 4 (lower is better)
Translates to: TGDLMWSLFRLHCRCDAEHMGLL*ELMPEF
Trigger: GAATTCTGGCATTAGCTCTCATAGGAGACCCATGTG...TTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGCTGAACGGGAAGCAACAAGATGGATTTTGGTTATATaGCTAAGGGCGACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: WSLFRLHCRCDAEREATRWILVI*LRATEA
Trigger: AGCCTCTGTCGCCCTTAGTCATATAACCAAAATCCA...TCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTCCCTTAATTCATAACCGGAGGGTGTaGTTCCAAAATACCTTCCTT +
Preference number: 4 (lower is better)
Translates to: PRSPDSHATTMTGSAPLIHNRRV*FQNTFL
Trigger: AAGGAAGGTATTTTGGAATCACACCCTCCGGTTATG...AATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGAGTGGCTGTAAGAGCCTaGCAGGGAAGATTCATGCCT +
Preference number: 4 (lower is better)
Translates to: WLSSLNSSFPYMTQFLLRVAVRA*QGRFMP
Trigger: AGGCATGAATCTTCCCTGTCAGGCTCTTACAGCCAC...TCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AGTTGCATAAACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGCCATGGAGGTTGCAGTaGGCCAAGACTGTACCACTG +
Preference number: 4 (lower is better)
Translates to: SCINNQALRYNKPGKDLGPWRLQ*AKTVPL
Trigger: CAGTGGTACAGTCTTGGCTCACTGCAACCTCCATGG...CCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTATGCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647912.1
CDS-3UTR GCA 90 bp CTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCAAGGTCTTGCTACCCTaGTCCTTCCATTCCCGCACC +
Preference number: 4 (lower is better)
Translates to: LSSLNSSFPYMTQFLLRFKVLLP*SFHSRT
Trigger: GGTGCGGGAATGGAAGGAGCAGGGTAGCAAGACCTT...GAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TCTGATTCTAAAGAAAACCTTCATGCAGCCAAGAAACTCAGGGCTCTGGAGGGGCCAGCTCGTAAGCAGTaGAGATGTGTTGGAACAGGC +
Preference number: 4 (lower is better)
Translates to: SDSKENLHAAKKLRALEGPARKQ*RCVGTG
Trigger: GCCTGTTCCAACACATCTGCACTGCTTACGAGCTGG...CCCCTCCAGAGCCCTGAGTTTCTTGGCTGCATGAAGGTTTTCTTTAGAATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GTGGGAGTTCTGGAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAAGTTTTCGGACGGAGTaGATCGCACAAAGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: VGVLEGFLFESVDLGKQPSFRTE*IAQSCH
Trigger: ATGGCAGCTTTGTGCGATGCACTCCGTCCGAAAACT...TGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCCAGAACTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACCCAGCACCTTCAATGTGACCAGTGCTCAACTCAGATGACAACAACCTGCAAGAGTTTTCGGACGGAGTaGATCGCACAAAGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: TQHLQCDQCSTQMTTTCKSFRTE*IAQSCH
Trigger: ATGGCAGCTTTGTGCGATGCACTCCGTCCGAAAACT...CTTGCAGGTTGTTGTCATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ATCATCAGTTTTGCACTGAGCAAGGAAGCACATGGGTCTCCTATGAGAGCTAATCAGCTTGCTGGGCTCTaGCTCATCTGTCATGACCCC +
Preference number: 4 (lower is better)
Translates to: IISFALSKEAHGSPMRANQLAGL*LICHDP
Trigger: GGGGTCATGACAGATGAGGCAGAGCCCAGCAAGCTG...ATTAGCTCTCATAGGAGACCCATGTGCTTCCTTGCTCAGTGCAAAACTGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GAAAGAAAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCGCTGCTCGTACAGCTTaGGCAGGGTCTCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: ERKRGMSGWRNQVDALFFAARTA*AGSHPG
Trigger: CCCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGC...GAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTTTCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TCTGATTCTAAAGAAAACCTTCATGCAGCCAAGAAACTCAGGGCTCTGGAGGGGCTTTTCAGGCTCCACTaGAGATGTGACGCTGAACGG +
Preference number: 4 (lower is better)
Translates to: SDSKENLHAAKKLRALEGLFRLH*RCDAER
Trigger: CCGTTCAGCGTCACATCTGCAGTGGAGCCTGAAAAG...CCCCTCCAGAGCCCTGAGTTTCTTGGCTGCATGAAGGTTTTCTTTAGAATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGCAGTTCGATTCAACCCTGGAATaGCTTCTCCAGGAACACAGG +
Preference number: 4 (lower is better)
Translates to: YMTQFLLRFGFSAEAGQFDSTLE*LLQEHR
Trigger: CCTGTGTTCCTGGAGAAGGCATTCCAGGGTTGAATC...GAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AGTTGCATAAACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGGGGAAAGATGAGGCCTaGAGGGTTGGTGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: SCINNQALRYNKPGKDLGGKDEA*RVGEPR
Trigger: TCTTGGCTCACCAACCCTGCAGGCCTCATCTTTCCC...CCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTATGCAACT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTAGACAGATGCTTCCCTaGAAGCCAGGTATGAGCCTT +
Preference number: 4 (lower is better)
Translates to: GCDSKIPSFPSPGLWIRSRQMLP*KPGMSL
Trigger: AAGGCTCATACCTGGCTTGCAGGGAAGCATCTGTCT...AGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GAAAGAAAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCAAGGGCGACAGAGGCTaGTGGCATCTCTGGCCACCG +
Preference number: 4 (lower is better)
Translates to: ERKRGMSGWRNQVDALFFKGDRG*WHLWPP
Trigger: CGGTGGCCAGAGATGCCAGCAGCCTCTGTCGCCCTT...GAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTTTCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACCGGAGGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATACTGATACTTTCCACATaGACTGCCCACTGGCATCAA +
Preference number: 4 (lower is better)
Translates to: TGGCDSKIPSFPSPGLWILILST*TAHWHQ
Trigger: TTGATGCCAGTGGGCAGTGCATGTGGAAAGTATCAG...TATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCCTCCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGACAGGGAAGATTCATaGCTTTCTCCTTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SFPYMTQFLLRFGFSAEADREDS*LSPWPP
Trigger: TGGGGGCCAAGGAGAAAGGCATGAATCTTCCCTGTC...AGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACAACAGGCCGTACTTGTaGGATGATGACTCGATGCCT +
Preference number: 4 (lower is better)
Translates to: RGMSGWRNQVDALFFQPHNRPYL*DDDSMP
Trigger: AGGCATCGAGTCATCATCCCACAAGTACGGCCTGTT...GTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGTGCCGCTGGGACTCGTaGGTGAACTTGGCACAGATA +
Preference number: 4 (lower is better)
Translates to: SLWNGNGTFSELRICKALCRWDS*VNLAQI
Trigger: TATCTGTGCCAAGTTCACCCACGAGTCCCAGCGGCA...CAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACCCAGCACCTTCAATGTGACCAGTGCTCAACTCAGATGACAACAACCTGCAAGAAGGGGATAATGTCCTaGAGCTCCCAGAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: TQHLQCDQCSTQMTTTCKKGIMS*SSQKML
Trigger: CAGCATCTTCTGGGAGCTCCAGGACATTATCCCCTT...CTTGCAGGTTGTTGTCATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGAGTTCTGGAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAAGCAAGGGGATAATGTCCTaGAGCTCCCAGAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: GVLEGFLFESVDLGKQPSKGIMS*SSQKML
Trigger: CAGCATCTTCTGGGAGCTCCAGGACATTATCCCCTT...GCTTGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCCAGAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGTGGGGAGTTCAGGAGGGAGATCTTaGGAGGCACCATCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: SELRICKALKLTTAGVGSSGGRS*EAPSSQ
Trigger: TTGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGA...ACTCCCCACCCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CACCCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTGGCCAAAGAAACTGGCTGCAGGCACTTCATaGGCACCAGCATGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HPSLSVISKYSSFWPKKLAAGTS*APACPA
Trigger: TGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGC...CAGTTTCTTTGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGTTGCATAAACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGCTGCCTCATTTCCTTTaGGGTGCACTAGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SCINNQALRYNKPGKDLGLPHFL*GALGLA
Trigger: AGCCAGGCCTAGTGCACCCCAAAGGAAATGAGGCAG...CCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTATGCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGTGGGGAGTCTGCCTCATTTCCTTTaGGGTGCACTAGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SELRICKALKLTTAGVGSLPHFL*GALGLA
Trigger: AGCCAGGCCTAGTGCACCCCAAAGGAAATGAGGCAG...ACTCCCCACCCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACCTGGCTTCAAAGTGTTTCACACGCGGCTCCCCATATGCTCCAATGTCGATGTTCAGGGTGGGAGTTCTaGAGGGGTTTCTCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: TWLQSVSHAAPHMLQCRCSGWEF*RGFSLK
Trigger: TTTCAAAGAGAAACCCCTCCAGAACTCCCACCCTGA...ACATCGACATTGGAGCATATGGGGAGCCGCGTGTGAAACACTTTGAAGCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTGGATTTTGGTTATATGTTGGGCTGTCAGGGTaGGAGTTCTGGAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: IPSFPSPGLWIRSGFWLYVGLSG*EFWRGF
Trigger: GAAACCCCTCCAGAACTCCCACCCTGACAGCCCAAC...ATATAACCAAAATCCAGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ATCATCAGTTTTGCACTGAGCAAGGAAGCACATGGGTCTCCTATGAGAGCTAATGGAGGAAGGTGGTGTTaGGCTGTCAGGGTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: IISFALSKEAHGSPMRANGGRWC*AVRVGV
Trigger: AACTCCCACCCTGACAGCCCAACACCACCTTCCTCC...ATTAGCTCTCATAGGAGACCCATGTGCTTCCTTGCTCAGTGCAAAACTGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CAAGAGCTACCACTTACCCAGCACCTTCAATGTGACCAGTGCTCAACTCAGATGTCATCATTCCAGCCATaGCTGTGCACAGGTGACCTA +
Preference number: 4 (lower is better)
Translates to: QELPLTQHLQCDQCSTQMSSFQP*LCTGDL
Trigger: TAGGTCACCTGTGCACAGCCATGGCTGGAATGATGA...CATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGGTAAGTGGTAGCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTGGATTTTGGTTATATGGACGGCACCAAGGATaGCAGGGAGAACTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: IPSFPSPGLWIRSGFWLYGRHQG*QGELWP
Trigger: AGGCCAAAGTTCTCCCTGCCATCCTTGGTGCCGTCC...ATATAACCAAAATCCAGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCACACGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACAAGGTTCCCTTCCCTCTaGAACGGAAATGGAACTTTC +
Preference number: 4 (lower is better)
Translates to: SHATTMTGSAPLIPASLTRFPSL*NGNGTF
Trigger: GAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCT...TGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCGTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGACGCCACAACCATGACTaGCTCAGCTCCCTTAATTCC +
Preference number: 4 (lower is better)
Translates to: WLSSLNSSFPYMTQFLLRRHNHD*LSSLNS
Trigger: GGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG...TCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCTGATTCTAAAGAAAACCTTCATGCAGCCAAGAAACTCAGGGCTCTGGAGGGGCGCCACAACCATGACTaGCTCAGCTCCCTTAATTCC +
Preference number: 4 (lower is better)
Translates to: SDSKENLHAAKKLRALEGRHNHD*LSSLNS
Trigger: GGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG...CCCCTCCAGAGCCCTGAGTTTCTTGGCTGCATGAAGGTTTTCTTTAGAATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTGCCAAATGGGTAGGGTaGTTCCTTTGCCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: GCDSKIPSFPSPGLWIRSAKWVG*FLCLLS
Trigger: ACTCAGAAGGCAAAGGAACCACCCTACCCATTTGGC...AGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGCAGGCAAGATTTTACTaGAGCAACATAACCGGAGGG +
Preference number: 4 (lower is better)
Translates to: RDEWLEKSSRCSFLPAPRQARFY*SNITGG
Trigger: CCCTCCGGTTATGTTGCTCCAGTAAAATCTTGCCTG...CCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGTGAGTCCAAAACCATCACATaGATGGCCAGGGACAGGACT +
Preference number: 4 (lower is better)
Translates to: MSGWRNQVDALFFQPHGESKTIT*MARDRT
Trigger: AGTCCTGTCCCTGGCCATCCATGTGATGGTTTTGGA...CTCACCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTCGAAACGCAGCTTGACGTACTTCTTGGCAGGGATGATGCGGATCTCAGCGGCAAGTATTCATCCTTCTaGCCAAAGAAACTGGCTACA +
Preference number: 4 (lower is better)
Translates to: LETQLDVLLGRDDADLSGKYSSF*PKKLAT
Trigger: TGTAGCCAGTTTCTTTGGCCAGAAGGATGAATACTT...GCCGCTGAGATCCGCATCATCCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGCAACATACTATACTCTaGGCCACTCACCCATGCACG +
Preference number: 4 (lower is better)
Translates to: FPYMTQFLLRFGFSAEAGQHTIL*ATHPCT
Trigger: CGTGCATGGGTGAGTGGCCCAGAGTATAGTATGTTG...CCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR TCA 90 bp TCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGGGCATAGAACAGGTCTaGGTTTTCGGACGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: SLWNGNGTFSELRICKALGIEQV*VFGRSA
Trigger: TGCACTCCGTCCGAAAACTCAGACCTGTTCTATGCC...CAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AGTTGCATAAACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGGGCATAGAACAGGTCTaGGTTTTCGGACGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: SCINNQALRYNKPGKDLGGIEQV*VFGRSA
Trigger: TGCACTCCGTCCGAAAACTCAGACCTGTTCTATGCC...CCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTATGCAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCGAAAGCAGCCAAGCTTaGGTGAAGGGAAGATGCCTG +
Preference number: 4 (lower is better)
Translates to: KRGMSGWRNQVDALFFQPESSQA*VKGRCL
Trigger: CAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTC...GGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGCAGTTCCCAGCTTCCCTTACATaGCGCAATTCCTTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: YMTQFLLRFGFSAEAGQFPASLT*RNSFSD
Trigger: ATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGG...GAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGACAGTAGAGAGGGGCTaGAACCTAGGTCTCCTGACT +
Preference number: 4 (lower is better)
Translates to: SLWNGNGTFSELRICKALTVERG*NLGLLT
Trigger: AGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACTGT...CAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TCTGATTCTAAAGAAAACCTTCATGCAGCCAAGAAACTCAGGGCTCTGGAGGGGTTCTGGCACCTGGAATaGCAAGACAGATGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SDSKENLHAAKKLRALEGFWHLE*QDRCFP
Trigger: AGGGAAGCATCTGTCTTGTCATTCCAGGTGCCAGAA...CCCCTCCAGAGCCCTGAGTTTCTTGGCTGCATGAAGGTTTTCTTTAGAATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AGTTGCATAAACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGCTTGGGTGGGATGGGTaGACACCCTTCAATGACTCT +
Preference number: 4 (lower is better)
Translates to: SCINNQALRYNKPGKDLGLGWDG*TPFNDS
Trigger: AGAGTCATTGAAGGGTGTTCACCCATCCCACCCAAG...CCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTATGCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp ACCCAGCACCTTCAATGTGACCAGTGCTCAACTCAGATGACAACAACCTGCAAGCACATGGGTCTCCTATaGGAGCTAATGCCAGAATTC +
Preference number: 4 (lower is better)
Translates to: TQHLQCDQCSTQMTTTCKHMGLL*ELMPEF
Trigger: GAATTCTGGCATTAGCTCTCATAGGAGACCCATGTG...CTTGCAGGTTGTTGTCATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GGAGTTCTGGAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAAGCCACATGGGTCTCCTATaGGAGCTAATGCCAGAATTC +
Preference number: 4 (lower is better)
Translates to: GVLEGFLFESVDLGKQPSHMGLL*ELMPEF
Trigger: GAATTCTGGCATTAGCTCTCATAGGAGACCCATGTG...GCTTGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCCAGAACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp ACCGGAGGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATACATAACCGGAGGGTGTaGTTCCAAAATACCTTCCTT +
Preference number: 4 (lower is better)
Translates to: TGGCDSKIPSFPSPGLWIHNRRV*FQNTFL
Trigger: AAGGAAGGTATTTTGGAATCACACCCTCCGGTTATG...TATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCCTCCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGGTGGCTGTAAGAGCCTaGCAGGGAAGATTCATGCCT +
Preference number: 4 (lower is better)
Translates to: SLWNGNGTFSELRICKALVAVRA*QGRFMP
Trigger: AGGCATGAATCTTCCCTGTCAGGCTCTTACAGCCAC...CAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGCAGTTCTTAAGAAGTTTTCGGACGGAGTaGATCGCACAAAGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: TQFLLRFGFSAEAGQFLRSFRTE*IAQSCH
Trigger: ATGGCAGCTTTGTGCGATGCACTCCGTCCGAAAACT...TCTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GTAGTGTCTCAAGGGAATGTACTCCAGGCCCTCTCGGTTTGTCTTCAGATAGTTAGTTTTCGGACGGAGTaGATCGCACAAAGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: VVSQGNVLQALSVCLQIVSFRTE*IAQSCH
Trigger: ATGGCAGCTTTGTGCGATGCACTCCGTCCGAAAACT...AACTATCTGAAGACAAACCGAGAGGGCCTGGAGTACATTCCCTTGAGACACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGCAGCTTGCTGGGCTCTaGCTCATCTGTCATGACCCC +
Preference number: 4 (lower is better)
Translates to: GTFSELRICKALKLTTAGQLAGL*LICHDP
Trigger: GGGGTCATGACAGATGAGGCAGAGCCCAGCAAGCTG...CCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CACCAAGACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCAACGGCTTGTAGTAATTaGCAATGCTATTCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: HQDKVGFGKDEACRVGEPTACSN*QCYSAC
Trigger: GCAAGCTGAATAGCATTGGCAATTACTACAAGCCGT...TGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GAAAGAAAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCTGCACCACGTGGTGCTaGTCGTACAGCTTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: ERKRGMSGWRNQVDALFFCTTWC*SYSLRR
Trigger: CCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCA...GAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTTTCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AGAAAGAAAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTGTGTGCAGGGCCTGCTaGAGGCACTTCATGGGCACC +
Preference number: 4 (lower is better)
Translates to: RKKKRDEWLEKSSRCSFLVCRAC*RHFMGT
Trigger: GGTGCCCATGAAGTGCCTGCAGCAGGCCCTGCACAC...AAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTTTCTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TTGCAACCACAGTGTCTAAGACAATCAGAAGGGTTCCAGGGAGGTCTTGTCTGTGTCGATGTAGAGCTCTaGCTCATTTCCTTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LQPQCLRQSEGFQGGLVCVDVEL*LISFGV
Trigger: CACCCCAAAGGAAATGAGGCAGAGCTCTACATCGAC...ACAGACAAGACCTCCCTGGAACCCTTCTGATTGTCTTAGACACTGTGGTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGAGTCGATGTAGAGCTCTaGCTCATTTCCTTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: WLSSLNSSFPYMTQFLLRVDVEL*LISFGV
Trigger: CACCCCAAAGGAAATGAGGCAGAGCTCTACATCGAC...TCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGGAGAAATCAAGTCGATaGTCTTTTCTTCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: RDEWLEKSSRCSFLPAPREKSSR*SFLPAP
Trigger: TGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTC...CCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTGAGAAATCAAGTCGATaGTCTTTTCTTCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: QMLPCKPGMSLSGNEMGAEKSSR*SFLPAP
Trigger: TGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTC...AGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTAACAGGCCGTACTTGTaGGATGATGACTCGATGCCT +
Preference number: 4 (lower is better)
Translates to: SFPYMTQFLLRFGFSAEANRPYL*DDDSMP
Trigger: AGGCATCGAGTCATCATCCCACAAGTACGGCCTGTT...AGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGTGGGGAGTGCAGTGCAGATGTGTTaGAACAGGCCGTACTTGTGG +
Preference number: 4 (lower is better)
Translates to: SELRICKALKLTTAGVGSAVQMC*NRPYLW
Trigger: CCACAAGTACGGCCTGTTCCAACACATCTGCACTGC...ACTCCCCACCCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGCAGTGCAGATGTGTTaGAACAGGCCGTACTTGTGG +
Preference number: 4 (lower is better)
Translates to: LSSLNSSFPYMTQFLLRFAVQMC*NRPYLW
Trigger: CCACAAGTACGGCCTGTTCCAACACATCTGCACTGC...GAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACACAATTGGATAAGCTTGACACATGCATGCAACCAAGGACTCCAATCACTGCATGCCGCTGGGACTCGTaGGTGAACTTGGCACAGATA +
Preference number: 4 (lower is better)
Translates to: TQLDKLDTCMQPRTPITACRWDS*VNLAQI
Trigger: TATCTGTGCCAAGTTCACCCACGAGTCCCAGCGGCA...TGCAGTGATTGGAGTCCTTGGTTGCATGCATGTGTCAAGCTTATCCAATTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR CCA 90 bp ACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGCAGTTCTTAAGAAAGGGGATAATGTCCTaGAGCTCCCAGAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: TQFLLRFGFSAEAGQFLRKGIMS*SSQKML
Trigger: CAGCATCTTCTGGGAGCTCCAGGACATTATCCCCTT...TCTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGTTGCATAAACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGAGGTAGCGGAAGATaGGGTTGTTGCCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: SCINNQALRYNKPGKDLGRGSGR*GCCQRG
Trigger: TCCCCTTTGGCAACAACCCCATCTTCCGCTACCTCT...CCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTATGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCAGAGGTAGCGGAAGATaGGGTTGTTGCCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: KRGMSGWRNQVDALFFQPRGSGR*GCCQRG
Trigger: TCCCCTTTGGCAACAACCCCATCTTCCGCTACCTCT...GGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCATCGGCATACAGCATCTaGAAGCCATGCACGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LNSSFPYMTQFLLRFGFSSAYSI*KPCTLR
Trigger: CCGCAGCGTGCATGGCTTCCAGATGCTGTATGCCGA...TGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
CDS-3UTR CCA 90 bp ACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCAAGAAGAATTCTCTCGCAGCTTGTaGTACAAGGAGCCATCAAAC +
Preference number: 4 (lower is better)
Translates to: TKWVLGKMRPAGLVSQEEFSRSL*YKEPSN
Trigger: GTTTGATGGCTCCTTGTACCACAAGCTGCGAGAGAA...TTCTTCTTGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTTCTCTCGCAGCTTGTaGTACAAGGAGCCATCAAAC +
Preference number: 4 (lower is better)
Translates to: NNQALRYNKPGKDLGRFPFSRSL*YKEPSN
Trigger: GTTTGATGGCTCCTTGTACCACAAGCTGCGAGAGAA...AGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTGGATTTTGGTTATATGACACAGGTGACCTAATGTaGAGCCTTTTCAGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: PSFPSPGLWIRSGFWLYDTGDLM*SLFRLH
Trigger: GTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGT...GTCATATAACCAAAATCCAGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGGAGGTTCCCTTCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTCCCACCAAGACAAAGTaGGTTTTGGGAAAGATGAGG +
Preference number: 4 (lower is better)
Translates to: GRFPSLWNGNGTFSELRIPTKTK*VLGKMR
Trigger: CCTCATCTTTCCCAAAACCCACTTTGTCTTGGTGGG...AATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGCAGTTCCCCACCAAGACAAAGTaGGTTTTGGGAAAGATGAGG +
Preference number: 4 (lower is better)
Translates to: YMTQFLLRFGFSAEAGQFPTKTK*VLGKMR
Trigger: CCTCATCTTTCCCAAAACCCACTTTGTCTTGGTGGG...GAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TGCAGCTCAGAGGACAATGACTTGCCCACGTTGCACAGCTCGCTGACAGTAGAGAAAAAGAGGGATGAGTaGTTGGAGAAATCAAGTCGA +
Preference number: 4 (lower is better)
Translates to: CSSEDNDLPTLHSSLTVEKKRDE*LEKSSR
Trigger: TCGACTTGATTTCTCCAACCACTCATCCCTCTTTTT...CTCTACTGTCAGCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGAGCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGAGAAATTAACTACAGCTaGGGTGGGGAGTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: WLSSLNSSFPYMTQFLLREINYS*GGEWWK
Trigger: CTTCCACCACTCCCCACCCCAGCTGTAGTTAATTTC...TCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGCAGTTCTTAAGAGAAATTAACTACAGCTaGGGTGGGGAGTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: TQFLLRFGFSAEAGQFLREINYS*GGEWWK
Trigger: CTTCCACCACTCCCCACCCCAGCTGTAGTTAATTTC...TCTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CAAGAGCTACCACTTACCCAGCACCTTCAATGTGACCAGTGCTCAACTCAGATGAGGTTCCCTTCCCTCTaGAACGGAAATGGAACTTTC +
Preference number: 4 (lower is better)
Translates to: QELPLTQHLQCDQCSTQMRFPSL*NGNGTF
Trigger: GAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCT...CATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGGTAAGTGGTAGCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGCAGTTCAGGTTCCCTTCCCTCTaGAACGGAAATGGAACTTTC +
Preference number: 4 (lower is better)
Translates to: YMTQFLLRFGFSAEAGQFRFPSL*NGNGTF
Trigger: GAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCT...GAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CGTCCCAGTGGCTTAGGGTTGGAGGCTTCACTGGCAAAACAATGGCACTGTTTATCCCCAAGTGTCCACTaGATCATTTTTCCTCTGACT +
Preference number: 4 (lower is better)
Translates to: RPSGLGLEASLAKQWHCLSPSVH*IIFPLT
Trigger: AGTCAGAGGAAAAATGATCCAGTGGACACTTGGGGA...TAAACAGTGCCATTGTTTTGCCAGTGAAGCCTCCAACCCTAAGCCACTGGGACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCACACGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATCCCCAAGTGTCCACTaGATCATTTTTCCTCTGACT +
Preference number: 4 (lower is better)
Translates to: SHATTMTGSAPLIPASLTSPSVH*IIFPLT
Trigger: AGTCAGAGGAAAAATGATCCAGTGGACACTTGGGGA...TGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCGTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTGGATTTTGGTTATATGACGCCAAATGGGTAGGGTaGTTCCTTTGCCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: PSFPSPGLWIRSGFWLYDAKWVG*FLCLLS
Trigger: ACTCAGAAGGCAAAGGAACCACCCTACCCATTTGGC...GTCATATAACCAAAATCCAGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp TCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGCCAAGCCCCGGGTTGTaGATAAGGTCTGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: SLWNGNGTFSELRICKALPSPGL*IRSGFW
Trigger: CCAAAATCCAGACCTTATCCACAACCCGGGGCTTGG...CAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGGGAGGGGTTTCTCTTTaGAAGTGTGGATCTAGGAAA +
Preference number: 4 (lower is better)
Translates to: FPYMTQFLLRFGFSAEAGGGVSL*KCGSRK
Trigger: TTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCC...CCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGTGGGGAGTATGGCTGTGCACAGGTaGCCTAATGTGGAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: SELRICKALKLTTAGVGSMAVHR*PNVEPF
Trigger: AAAAGGCTCCACATTAGGTCACCTGTGCACAGCCAT...ACTCCCCACCCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCATGGCTGTGCACAGGTaGCCTAATGTGGAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: KRGMSGWRNQVDALFFQPMAVHR*PNVEPF
Trigger: AAAAGGCTCCACATTAGGTCACCTGTGCACAGCCAT...GGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATAGGAAGGATCTTGAATaGCAGATAATCCCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: YNKPGKDLGRFPSLWNGNRKDLE*QIIPKC
Trigger: ACACTTGGGGATTATCTGTCATTCAAGATCCTTCCT...ATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp ACCCAGCTTCTCTCGCAGCTTGTGGTACAAGGAGCCATCAAACATCTCCCAGAAAGGAAGGATCTTGAATaGCAGATAATCCCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: TQLLSQLVVQGAIKHLPERKDLE*QIIPKC
Trigger: ACACTTGGGGATTATCTGTCATTCAAGATCCTTCCT...TTCTGGGAGATGTTTGATGGCTCCTTGTACCACAAGCTGCGAGAGAAGCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp AAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCCTGCAAGCCAGGTATaGGCCTTTCTGGAAATGAGA +
Preference number: 4 (lower is better)
Translates to: KRGMSGWRNQVDALFFQPPASQV*AFLEMR
Trigger: TCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGG...GGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGTGGGGAGTCCTGCAAGCCAGGTATaGGCCTTTCTGGAAATGAGA +
Preference number: 4 (lower is better)
Translates to: SELRICKALKLTTAGVGSPASQV*AFLEMR
Trigger: TCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGG...ACTCCCCACCCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGTGGATTTTGGTTATATaGCTAAGGGCGACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: FPYMTQFLLRFGFSAEAGWILVI*LRATEA
Trigger: AGCCTCTGTCGCCCTTAGTCATATAACCAAAATCCA...CCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GAAAGAAAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCTTCCATTCCCGCACCTaGTTCTGGATGTCCCGCACG +
Preference number: 4 (lower is better)
Translates to: ERKRGMSGWRNQVDALFFFHSRT*FWMSRT
Trigger: CGTGCGGGACATCCAGAAGCAGGTGCGGGAATGGAA...GAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTTTCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCCAATGCTATTCAGCTTaGTGGGCTCTGCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: LSSLNSSFPYMTQFLLRFQCYSA*WALPHL
Trigger: CAGATGAGGCAGAGCCCAGCAAGCTGAATAGCATTG...GAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AGTTGCATAAACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGCAATGCTATTCAGCTTaGTGGGCTCTGCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: SCINNQALRYNKPGKDLGQCYSA*WALPHL
Trigger: CAGATGAGGCAGAGCCCAGCAAGCTGAATAGCATTG...CCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTATGCAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAAGCTTGAGTGAACAATGCTATTCAGCTTaGTGGGCTCTGCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: EGFLFESVDLGKQPSLSEQCYSA*WALPHL
Trigger: CAGATGAGGCAGAGCCCAGCAAGCTGAATAGCATTG...TTCACTCAAGCTTGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGGTCGATGTAGAGCTCTaGCTCATTTCCTTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SLWNGNGTFSELRICKALVDVEL*LISFGV
Trigger: CACCCCAAAGGAAATGAGGCAGAGCTCTACATCGAC...CAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGATTCAACCCTGGAATaGCTTCTCCAGGAACACAGG +
Preference number: 4 (lower is better)
Translates to: LSSLNSSFPYMTQFLLRFDSTLE*LLQEHR
Trigger: CCTGTGTTCCTGGAGAAGGCATTCCAGGGTTGAATC...GAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAAGCTTGAGTGAAGATTCAACCCTGGAATaGCTTCTCCAGGAACACAGG +
Preference number: 4 (lower is better)
Translates to: EGFLFESVDLGKQPSLSEDSTLE*LLQEHR
Trigger: CCTGTGTTCCTGGAGAAGGCATTCCAGGGTTGAATC...TTCACTCAAGCTTGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GGAAGCAACAAGAGCTACCACTTACCCAGCACCTTCAATGTGACCAGTGCTCAAGAGAAATCAAGTCGATaGTCTTTTCTTCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: GSNKSYHLPSTFNVTSAQEKSSR*SFLPAP
Trigger: TGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTC...TTGAGCACTGGTCACATTGAAGGTGCTGGGTAAGTGGTAGCTCTTGTTGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGAGAAATCAAGTCGATaGTCTTTTCTTCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: RGMSGWRNQVDALFFQPHEKSSR*SFLPAP
Trigger: TGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTC...GTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGTGGGGAGTAGACAGATGCTTCCCTaGAAGCCAGGTATGAGCCTT +
Preference number: 4 (lower is better)
Translates to: SELRICKALKLTTAGVGSRQMLP*KPGMSL
Trigger: AAGGCTCATACCTGGCTTGCAGGGAAGCATCTGTCT...ACTCCCCACCCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CTGATTCTAAAGAAAACCTTCATGCAGCCAAGAAACTCAGGGCTCTGGAGGGGACTGATACTTTCCACATaGACTGCCCACTGGCATCAA +
Preference number: 4 (lower is better)
Translates to: LILKKTFMQPRNSGLWRGLILST*TAHWHQ
Trigger: TTGATGCCAGTGGGCAGTGCATGTGGAAAGTATCAG...TCCCCTCCAGAGCCCTGAGTTTCTTGGCTGCATGAAGGTTTTCTTTAGAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CACCCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTGGCCAAAGAAACTGGACAGGGAAGATTCATaGCTTTCTCCTTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: HPSLSVISKYSSFWPKKLDREDS*LSPWPP
Trigger: TGGGGGCCAAGGAGAAAGGCATGAATCTTCCCTGTC...CAGTTTCTTTGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TCTGATTCTAAAGAAAACCTTCATGCAGCCAAGAAACTCAGGGCTCTGGAGGGGCCCAACTGCTCATTCTaGAGCCCAGAAAAGGCTTTT +
Preference number: 4 (lower is better)
Translates to: SDSKENLHAAKKLRALEGPNCSF*SPEKAF
Trigger: AAAAGCCTTTTCTGGGCTGCAGAATGAGCAGTTGGG...CCCCTCCAGAGCCCTGAGTTTCTTGGCTGCATGAAGGTTTTCTTTAGAATCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR CCA 90 bp GGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACACGCAGGGTCTCACCCTaGGTCAGCTTCAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GNGTFSELRICKALKLTTRRVSP*VSFRRE
Trigger: CTCCCTCCTGAAGCTGACCCAGGGTGAGACCCTGCG...TGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAACGGACACAGCCAGATaGGGTAGACGTGGATGTCGT +
Preference number: 4 (lower is better)
Translates to: LNSSFPYMTQFLLRFGFSTDTAR*GRRGCR
Trigger: ACGACATCCACGTCTACCCCATCTGGCTGTGTCCGT...TGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAAACGGACACAGCCAGATaGGGTAGACGTGGATGTCGT +
Preference number: 4 (lower is better)
Translates to: LWNGNGTFSELRICKALKTDTAR*GRRGCR
Trigger: ACGACATCCACGTCTACCCCATCTGGCTGTGTCCGT...TTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GAAAGAAAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCTGGCAGGGAGAACTTTaGCCTCGGACCTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: ERKRGMSGWRNQVDALFFWQGEL*PRTWLW
Trigger: CCAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCA...GAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTTTCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTGATTCTAAAGAAAACCTTCATGCAGCCAAGAAACTCAGGGCTCTGGAGGGGACCCACCAAGACAAAGTaGGTTTTGGGAAAGATGAGG +
Preference number: 4 (lower is better)
Translates to: LILKKTFMQPRNSGLWRGPTKTK*VLGKMR
Trigger: CCTCATCTTTCCCAAAACCCACTTTGTCTTGGTGGG...TCCCCTCCAGAGCCCTGAGTTTCTTGGCTGCATGAAGGTTTTCTTTAGAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCACAAAAAGAGGGATGAGTaGTTGGAGAAATCAAGTCGA +
Preference number: 4 (lower is better)
Translates to: TADVTLNGKQQELPLTQHKKRDE*LEKSSR
Trigger: TCGACTTGATTTCTCCAACCACTCATCCCTCTTTTT...GTGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGAAAAAGAGGGATGAGTaGTTGGAGAAATCAAGTCGA +
Preference number: 4 (lower is better)
Translates to: RHNHDWLSSLNSSFPYMTKKRDE*LEKSSR
Trigger: TCGACTTGATTTCTCCAACCACTCATCCCTCTTTTT...CGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGAAAGAAAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTGCGGCCCCACAGCCATaGGGACATGTCTTCCAGACA +
Preference number: 4 (lower is better)
Translates to: RKKKRDEWLEKSSRCSFLAAPQP*GHVFQT
Trigger: TGTCTGGAAGACATGTCCCCATGGCTGTGGGGCCGC...AAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTTTCTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGAGGAAGGATCTTGAATaGCAGATAATCCCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: FPYMTQFLLRFGFSAEAGRKDLE*QIIPKC
Trigger: ACACTTGGGGATTATCTGTCATTCAAGATCCTTCCT...CCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAACTTGGGTGGGATGGGTaGACACCCTTCAATGACTCT +
Preference number: 4 (lower is better)
Translates to: LWNGNGTFSELRICKALKLGWDG*TPFNDS
Trigger: AGAGTCATTGAAGGGTGTTCACCCATCCCACCCAAG...TTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CTGTGCACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGAAATCAAAGTATTCTaGACTGTTTCTTGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LCTGDLMWSLFRLHCRCDEIKVF*TVSWCP
Trigger: TGGACACCAAGAAACAGTTCAGAATACTTTGATTTC...GTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGTGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GCCCTCTGCCATCCCCAGGCAACTACTGATGCGCTATCAGTATGGATTCATGTGGAAATCAAAGTATTCTaGACTGTTTCTTGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: ALCHPQATTDALSVWIHVEIKVF*TVSWCP
Trigger: TGGACACCAAGAAACAGTTCAGAATACTTTGATTTC...CACATGAATCCATACTGATAGCGCATCAGTAGTTGCCTGGGGATGGCAGAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR GCA 90 bp CAAGAGCTACCACTTACCCAGCACCTTCAATGTGACCAGTGCTCAACTCAGATGTGTAGTAATTGCCAATaGTATTCAGCTTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QELPLTQHLQCDQCSTQMCSNCQ*YSACWA
Trigger: AGCCCAGCAAGCTGAATAGCATTGGCAATTACTACA...CATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGGTAAGTGGTAGCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GTGGGAGTTCTGGAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCATGTAGTAATTGCCAATaGTATTCAGCTTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VGVLEGFLFESVDLGKQPCSNCQ*YSACWA
Trigger: AGCCCAGCAAGCTGAATAGCATTGGCAATTACTACA...TGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCCAGAACTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GGAAGCAACAAGAGCTACCACTTACCCAGCACCTTCAATGTGACCAGTGCTCAAACGGCTTGTAGTAATTaGCAATGCTATTCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: GSNKSYHLPSTFNVTSAQTACSN*QCYSAC
Trigger: GCAAGCTGAATAGCATTGGCAATTACTACAAGCCGT...TTGAGCACTGGTCACATTGAAGGTGCTGGGTAAGTGGTAGCTCTTGTTGCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp ATCATCAGTTTTGCACTGAGCAAGGAAGCACATGGGTCTCCTATGAGAGCTAATGTCGATGTAGAGCTCTaGCTCATTTCCTTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: IISFALSKEAHGSPMRANVDVEL*LISFGV
Trigger: CACCCCAAAGGAAATGAGGCAGAGCTCTACATCGAC...ATTAGCTCTCATAGGAGACCCATGTGCTTCCTTGCTCAGTGCAAAACTGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TCTGATTCTAAAGAAAACCTTCATGCAGCCAAGAAACTCAGGGCTCTGGAGGGGACTTTCCACATGCACTaGCCACTGGCATCAAGTTTA +
Preference number: 4 (lower is better)
Translates to: SDSKENLHAAKKLRALEGTFHMH*PLASSL
Trigger: TAAACTTGATGCCAGTGGGCAGTGCATGTGGAAAGT...CCCCTCCAGAGCCCTGAGTTTCTTGGCTGCATGAAGGTTTTCTTTAGAATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGCTGATACTTTCCACATaGACTGCCCACTGGCATCAA +
Preference number: 4 (lower is better)
Translates to: SLWNGNGTFSELRICKALLILST*TAHWHQ
Trigger: TTGATGCCAGTGGGCAGTGCATGTGGAAAGTATCAG...CAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGACAGGGAAGATTCATaGCTTTCTCCTTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GTFSELRICKALKLTTAGDREDS*LSPWPP
Trigger: TGGGGGCCAAGGAGAAAGGCATGAATCTTCCCTGTC...CCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAAGCCCTTCCACGAAGTaGTTCTCCTGCCGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: GNGTFSELRICKALKLTTSPSTK*FSCRWD
Trigger: GTCCCAGCGGCAGGAGAACCACTTCGTGGAAGGGCT...TGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCTCAGGGTGGGAGTTCTaGAGGGGTTTCTCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: KRGMSGWRNQVDALFFQPSGWEF*RGFSLK
Trigger: TTTCAAAGAGAAACCCCTCCAGAACTCCCACCCTGA...GGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGAAAGAAAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCTTTGGCCTCGGACCTaGCTTTGGCACAGCGCATCT +
Preference number: 4 (lower is better)
Translates to: RKKKRDEWLEKSSRCSFLLWPRT*LWHSAS
Trigger: AGATGCGCTGTGCCAAAGCCAGGTCCGAGGCCAAAG...AAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTTTCTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAAGCTTGAGTGAACAGGCAAGATTTTACTaGAGCAACATAACCGGAGGG +
Preference number: 4 (lower is better)
Translates to: EGFLFESVDLGKQPSLSEQARFY*SNITGG
Trigger: CCCTCCGGTTATGTTGCTCCAGTAAAATCTTGCCTG...TTCACTCAAGCTTGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCCAGGCAAGATTTTACTaGAGCAACATAACCGGAGGG +
Preference number: 4 (lower is better)
Translates to: LSSLNSSFPYMTQFLLRFQARFY*SNITGG
Trigger: CCCTCCGGTTATGTTGCTCCAGTAAAATCTTGCCTG...GAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GAAAGAAAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCGAGAAGCAGAGGAGCTaGAGCTCCCAGAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: ERKRGMSGWRNQVDALFFEKQRS*SSQKML
Trigger: CAGCATCTTCTGGGAGCTCCAGCTCCTCTGCTTCTC...GAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTTTCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535035.6
3UTR CAA 72 bp AACCCAACTGCTCATTCTGCAGCCCAGAAAAGGCTTTaGGAGGATTTCTCTTGTTTAACCCCGTTAACCTGG +
Preference number: 4 (lower is better)
Translates to: NPTAHSAAQKRL*EDFSCLTPLTW
Trigger: CCAGGTTAACGGGGTTAAACAAGAGAAATCCTCCAAAAGCCTTTTCTGGGCTGCAGAATGAGCAGTTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR TCA 90 bp CTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGAGGGGTTTCTCTTTaGAAGTGTGGATCTAGGAAA +
Preference number: 4 (lower is better)
Translates to: LSSLNSSFPYMTQFLLRFGGVSL*KCGSRK
Trigger: TTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCC...GAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGTGGGGAGTGGAGGGGTTTCTCTTTaGAAGTGTGGATCTAGGAAA +
Preference number: 4 (lower is better)
Translates to: SELRICKALKLTTAGVGSGGVSL*KCGSRK
Trigger: TTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCC...ACTCCCCACCCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGTGAGCCAAGAAGAATaGGCCCAGGTCCCCTGGATC +
Preference number: 4 (lower is better)
Translates to: GNGTFSELRICKALKLTTVSQEE*AQVPWI
Trigger: GATCCAGGGGACCTGGGCTCATTCTTCTTGGCTCAC...TGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CACCCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTGGCCAAAGAAACTGCCAGCTTCCCTTACATaGCGCAATTCCTTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: HPSLSVISKYSSFWPKKLPASLT*RNSFSD
Trigger: ATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGG...CAGTTTCTTTGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CAAGAGCTACCACTTACCCAGCACCTTCAATGTGACCAGTGCTCAACTCAGATGTTGAAGGAAGGATCTTaGATGACAGATAATCCCCAA +
Preference number: 4 (lower is better)
Translates to: QELPLTQHLQCDQCSTQMLKEGS*MTDNPQ
Trigger: TTGGGGATTATCTGTCATTCAAGATCCTTCCTTCAA...CATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGGTAAGTGGTAGCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp ACCCAGCACCTTCAATGTGACCAGTGCTCAACTCAGATGACAACAACCTGCAAGTTGAAGGAAGGATCTTaGATGACAGATAATCCCCAA +
Preference number: 4 (lower is better)
Translates to: TQHLQCDQCSTQMTTTCKLKEGS*MTDNPQ
Trigger: TTGGGGATTATCTGTCATTCAAGATCCTTCCTTCAA...CTTGCAGGTTGTTGTCATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CACCCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTGGCCAAAGAAACTGTCATCAGTTTTGCACTaGGCAAGGAAGCACATGGGT +
Preference number: 4 (lower is better)
Translates to: HPSLSVISKYSSFWPKKLSSVLH*ARKHMG
Trigger: ACCCATGTGCTTCCTTGCTCAGTGCAAAACTGATGA...CAGTTTCTTTGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGAGTTTTCGGACGGAGTaGATCGCACAAAGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: GTFSELRICKALKLTTAGSFRTE*IAQSCH
Trigger: ATGGCAGCTTTGTGCGATGCACTCCGTCCGAAAACT...CCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCACAATGCTATTCAGCTTaGTGGGCTCTGCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: LNSSFPYMTQFLLRFGFSQCYSA*WALPHL
Trigger: CAGATGAGGCAGAGCCCAGCAAGCTGAATAGCATTG...TGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp TGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATGTAGTAATTGCCAATaGTATTCAGCTTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: WLSSLNSSFPYMTQFLLRCSNCQ*YSACWA
Trigger: AGCCCAGCAAGCTGAATAGCATTGGCAATTACTACA...TCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTACGGCTTGTAGTAATTaGCAATGCTATTCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: SFPYMTQFLLRFGFSAEATACSN*QCYSAC
Trigger: GCAAGCTGAATAGCATTGGCAATTACTACAAGCCGT...AGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCGAGAAATCAAGTCGATaGTCTTTTCTTCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: KRGMSGWRNQVDALFFQPEKSSR*SFLPAP
Trigger: TGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTC...GGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGAGAAATCAAGTCGATaGTCTTTTCTTCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LSSLNSSFPYMTQFLLRFEKSSR*SFLPAP
Trigger: TGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTC...GAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp CTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAAAGACAGATGCTTCCCTaGAAGCCAGGTATGAGCCTT +
Preference number: 4 (lower is better)
Translates to: LWNGNGTFSELRICKALKRQMLP*KPGMSL
Trigger: AAGGCTCATACCTGGCTTGCAGGGAAGCATCTGTCT...TTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAAACAGGCCGTACTTGTaGGATGATGACTCGATGCCT +
Preference number: 4 (lower is better)
Translates to: LNSSFPYMTQFLLRFGFSNRPYL*DDDSMP
Trigger: AGGCATCGAGTCATCATCCCACAAGTACGGCCTGTT...TGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp AGAAAGAAAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTTGCCGCTGGGACTCGTaGGTGAACTTGGCACAGATA +
Preference number: 4 (lower is better)
Translates to: RKKKRDEWLEKSSRCSFLCRWDS*VNLAQI
Trigger: TATCTGTGCCAAGTTCACCCACGAGTCCCAGCGGCA...AAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTTTCTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAAGCCTCATGCAGGACCTaGCTTCAAAGTGTTTCACAC +
Preference number: 4 (lower is better)
Translates to: LWNGNGTFSELRICKALKASCRT*LQSVSH
Trigger: GTGTGAAACACTTTGAAGCCAGGTCCTGCATGAGGC...TTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAAAGCCAGGAGGAAGGTaGTGTTGGGCTGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GNGTFSELRICKALKLTTKPGGR*CWAVRV
Trigger: CACCCTGACAGCCCAACACCACCTTCCTCCTGGCTT...TGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CACCCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTGGCCAAAGAAACTGCCCACCAAGACAAAGTaGGTTTTGGGAAAGATGAGG +
Preference number: 4 (lower is better)
Translates to: HPSLSVISKYSSFWPKKLPTKTK*VLGKMR
Trigger: CCTCATCTTTCCCAAAACCCACTTTGTCTTGGTGGG...CAGTTTCTTTGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGTGAGAAGTATTCATCCTTCTaGCCAAAGAAACTGGCTACA +
Preference number: 4 (lower is better)
Translates to: MSGWRNQVDALFFQPHGEKYSSF*PKKLAT
Trigger: TGTAGCCAGTTTCTTTGGCCAGAAGGATGAATACTT...CTCACCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCAAGAAGAAGATGCGCTATCAGTATaGATTCATGTGTGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: TKWVLGKMRPAGLVSQEEDALSV*IHVCFW
Trigger: CCAAAAACACACATGAATCCATACTGATAGCGCATC...TTCTTCTTGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR TCA 90 bp GGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTCGAAACGCAGCTTaGCGTACTTCTTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GNGTFSELRICKALKLTTARNAA*RTSWQG
Trigger: TCCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGC...TGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GAAAGAAAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCATTCGGGTTTTCAGCTaGGGCTGGGCAGTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: ERKRGMSGWRNQVDALFFIRVFS*GWAVLK
Trigger: CTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAAT...GAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTTTCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp TGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTGAAGGAAGGATCTTaGATGACAGATAATCCCCAA +
Preference number: 4 (lower is better)
Translates to: WLSSLNSSFPYMTQFLLRLKEGS*MTDNPQ
Trigger: TTGGGGATTATCTGTCATTCAAGATCCTTCCTTCAA...TCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGACAATCTGTTTCTTaGTGTCCACTTCCAGAATGT +
Preference number: 4 (lower is better)
Translates to: LSSLNSSFPYMTQFLLRFGQSVS*CPLPEC
Trigger: ACATTCTGGAAGTGGACACCAAGAAACAGATTGTCC...GAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
CDS-3UTR CCA 90 bp GGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGTTCTCTCGCAGCTTGTaGTACAAGGAGCCATCAAAC +
Preference number: 4 (lower is better)
Translates to: GTFSELRICKALKLTTAGFSRSL*YKEPSN
Trigger: GTTTGATGGCTCCTTGTACCACAAGCTGCGAGAGAA...CCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGACAAGATTCAACCCTaGAATGCCTTCTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GTFSELRICKALKLTTAGDKIQP*NAFSRN
Trigger: GTTCCTGGAGAAGGCATTCCAGGGTTGAATCTTGTC...CCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp ACAAGACAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGAAAAAGAGGGATGAGTaGTTGGAGAAATCAAGTCGA +
Preference number: 4 (lower is better)
Translates to: TRQMLPCKPGMSLSGNEMKKRDE*LEKSSR
Trigger: TCGACTTGATTTCTCCAACCACTCATCCCTCTTTTT...CATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTGTCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GAAAGAAAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCCAGCTTCCCTTACATaGCGCAATTCCTTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: ERKRGMSGWRNQVDALFFPASLT*RNSFSD
Trigger: ATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGG...GAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTTTCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR TCA 90 bp CTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCATGGATTTTGGTTATATaGCTAAGGGCGACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: LNSSFPYMTQFLLRFGFSWILVI*LRATEA
Trigger: AGCCTCTGTCGCCCTTAGTCATATAACCAAAATCCA...TGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR TCA 90 bp GGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAATCCAGGCTGTTTTCTaGGCAATCCTCTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GNGTFSELRICKALKLTTIQAVF*AILCPG
Trigger: CCCAGGACAGAGGATTGCTCAGAAAACAGCCTGGAT...TGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR TCA 90 bp GAAAGAAAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCGGAGGGGTTTCTCTTTaGAAGTGTGGATCTAGGAAA +
Preference number: 4 (lower is better)
Translates to: ERKRGMSGWRNQVDALFFGGVSL*KCGSRK
Trigger: TTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCC...GAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTTTCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAAACAGGCCGTACTTGTaGGATGATGACTCGATGCCT +
Preference number: 4 (lower is better)
Translates to: GNGTFSELRICKALKLTTNRPYL*DDDSMP
Trigger: AGGCATCGAGTCATCATCCCACAAGTACGGCCTGTT...TGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp CACCCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTGGCCAAAGAAACTGAAGTATTCATCCTTCTaGCCAAAGAAACTGGCTACA +
Preference number: 4 (lower is better)
Translates to: HPSLSVISKYSSFWPKKLKYSSF*PKKLAT
Trigger: TGTAGCCAGTTTCTTTGGCCAGAAGGATGAATACTT...CAGTTTCTTTGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR GCA 90 bp AGAAAGAAAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTACTTTCCACATGCACTaGCCACTGGCATCAAGTTTA +
Preference number: 4 (lower is better)
Translates to: RKKKRDEWLEKSSRCSFLTFHMH*PLASSL
Trigger: TAAACTTGATGCCAGTGGGCAGTGCATGTGGAAAGT...AAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTTTCTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGACAAGATTCAACCCTaGAATGCCTTCTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GNGTFSELRICKALKLTTDKIQP*NAFSRN
Trigger: GTTCCTGGAGAAGGCATTCCAGGGTTGAATCTTGTC...TGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CCA 90 bp GGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACATCCCCAAGTGTCCACTaGATCATTTTTCCTCTGACT +
Preference number: 4 (lower is better)
Translates to: GNGTFSELRICKALKLTTSPSVH*IIFPLT
Trigger: AGTCAGAGGAAAAATGATCCAGTGGACACTTGGGGA...TGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR GCA 90 bp GGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACATGTAGTAATTGCCAATaGTATTCAGCTTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GNGTFSELRICKALKLTTCSNCQ*YSACWA
Trigger: AGCCCAGCAAGCTGAATAGCATTGGCAATTACTACA...TGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp TCGGGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCTTGTGGTACAAGGAGGGAGCGCTGCTGAGCTaGAACACCACCCAGGCGCGC +
Preference number: 5 (lower is better)
Translates to: SGKASWQPSFSRSLWYKEGALLS*NTTQAR
Trigger: GCGCGCCTGGGTGGTGTTCAAGCTCAGCAGCGCTCC...CTCCTTGTACCACAAGCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GGGAAGATGCCTGACCACTCACACGTGTCTGTCTCTCCAGGCGGGCTCCAGCTCTGCTGCTCGTACAGCTaGCGCAGGGTCTCACCCTGG +
Preference number: 5 (lower is better)
Translates to: GKMPDHSHVSVSPGGLQLCCSYS*RRVSPW
Trigger: CCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCA...GAGCTGGAGCCCGCCTGGAGAGACAGACACGTGTGAGTGGTCAGGCATCTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AATGCCTTCTCCAGGAACACAGGGCACTCCGAGTGGACTCAGTGGTGGCTGGGGCTTCTGCCCCTCTGCTaGGCCAGAGGCACAGCTGCC +
Preference number: 5 (lower is better)
Translates to: NAFSRNTGHSEWTQWWLGLLPLC*ARGTAA
Trigger: GGCAGCTGTGCCTCTGGCCAAGCAGAGGGGCAGAAG...CCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGTGTTCCTGGAGAAGGCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR CAA 90 bp AAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACGGAGCGCTGCTGAGCTaGAACACCACCCAGGCGCGC +
Preference number: 5 (lower is better)
Translates to: KTLLRHWQCAKPWVGWVNGALLS*NTTQAR
Trigger: GCGCGCCTGGGTGGTGTTCAAGCTCAGCAGCGCTCC...GTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CCCCAGCCCTCACAAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTTGCTGCTCGTACAGCTaGCGCAGGGTCTCACCCTGG +
Preference number: 5 (lower is better)
Translates to: PQPSQDPAKTLAVCQALGCCSYS*RRVSPW
Trigger: CCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCA...ACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CTGCTGCAGGCACTTCATGGGCACCAGCATGTCCTGCACCACGTGGTGCTGCTCCAGTGCCTGGCGGCCTaGCAGATCTTGTCGTACACC +
Preference number: 5 (lower is better)
Translates to: LLQALHGHQHVLHHVVLLQCLAA*QILSYT
Trigger: GGTGTACGACAAGATCTGCAAGGCCGCCAGGCACTG...GAGCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CCCAGCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTTGGAACAGGCCGTACTaGTGGGATGATGACTCGATG +
Preference number: 5 (lower is better)
Translates to: PSPCCRAARTHSHQDKVGWNRPY*WDDDSM
Trigger: CATCGAGTCATCATCCCACAAGTACGGCCTGTTCCA...ACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGGTCTCACCCTGGCTCGAAACGCAGCTaGACGTACTTCTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: ACPAPRGAARTACAGSHPGSKRS*TYFLAG
Trigger: CCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGCC...AGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp TCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTGACGTGGATGTCGTTTaGGAAGGTGTGCAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: SCEDLVWLMEAMAGQLQRDVDVV*EGVQGL
Trigger: CAGGCCCTGCACACCTTCCAAAACGACATCCACGTC...ACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp ATGGGTAGGGTGGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACGCGGCCTTGCAGATCTaGTCGTACACCTCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: MGRVVPLPSECLDAPSPHAALQI*SYTSGK
Trigger: CTTCCCCGAGGTGTACGACAAGATCTGCAAGGCCGC...GTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS CCA 90 bp AACACGGGGAGAGTCCAGCCAATGGAGGTCAGCAGGGCAGTCACCTaGCCCATGGTCACCAAGGGCTCCACACGGACAATCTGTAATCCC +
Preference number: 5 (lower is better)
Translates to: NTGRVQPMEVSRAVT*PMVTKGSTRTICNP
Trigger: GGGATTACAGATTGTCCGTGTGGAGCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCTGACCTCCATTGGCTGGACTCTCCCCGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648712.1
CDS-3UTR CAA 90 bp CACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCAGGAGCGCTGCTGAGCTaGAACACCACCCAGGCGCGC +
Preference number: 5 (lower is better)
Translates to: HCRCDAEREATRATTYPAGALLS*NTTQAR
Trigger: GCGCGCCTGGGTGGTGTTCAAGCTCAGCAGCGCTCC...TGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CCCCAGCCCTCACAAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGACTCGTGGGTGAACTaGGCACAGATAGCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PQPSQDPAKTLAVCQALGDSWVN*AQIASR
Trigger: CCTGGAGGCTATCTGTGCCAAGTTCACCCACGAGTC...ACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GCCTCCAGGCCCCGCACTGGCTCGAAACGCAGCTTGACGTACTTCTTGGCAGGGCCAGGCCCTCTCGGTTaGTCTTCAGATAGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: ASRPRTGSKRSLTYFLAGPGPLG*SSDSSP
Trigger: TGGAGAACTATCTGAAGACAAACCGAGAGGGCCTGG...CCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGCCAGTGCGGGGCCTGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp ATGGGTAGGGTGGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACTTCAGGAGGGAGATCTaGGGAGGCACCATCCAGCCA +
Preference number: 5 (lower is better)
Translates to: MGRVVPLPSECLDAPSPHFRREI*GGTIQP
Trigger: TGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGAA...GTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTGCTGCTCGTACAGCTaGCGCAGGGTCTCACCCTGG +
Preference number: 5 (lower is better)
Translates to: REGLKPRSPDSHATTMTGCCSYS*RRVSPW
Trigger: CCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCA...GCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AATGCCTTCTCCAGGAACACAGGGCACTCCGAGTGGACTCAGTGGTGGCTGGGGGACGTGGATGTCGTTTaGGAAGGTGTGCAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: NAFSRNTGHSEWTQWWLGDVDVV*EGVQGL
Trigger: CAGGCCCTGCACACCTTCCAAAACGACATCCACGTC...CCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGTGTTCCTGGAGAAGGCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS CCA 90 bp GGAGAGTCCAGCCAATGGAGGTCAGCAGGGCAGTCACCTGGCCCATaGTCACCAAGGGCTCCACACGGACAATCTGTTTCTTGGTGTCCA +
Preference number: 5 (lower is better)
Translates to: GESSQWRSAGQSPGP*SPRAPHGQSVSWCP
Trigger: TGGACACCAAGAAACAGATTGTCCGTGTGGAGCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCTGACCTCCATTGGCTGGACTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647585.1
ENST00000648182.1
ENST00000648641.1
ENST00000650362.1
CDS CCA 90 bp AACACGGGGAGAGTCCAGCCAATGGAGGTCAGCAGGGCAGTCACCTaGCCCATGGTCACCAAGGGCTCCACACGGACAATCTGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: NTGRVQPMEVSRAVT*PMVTKGSTRTICFL
Trigger: CAAGAAACAGATTGTCCGTGTGGAGCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCTGACCTCCATTGGCTGGACTCTCCCCGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647585.1
ENST00000648182.1
ENST00000648641.1
ENST00000650362.1
CDS CCA 90 bp GGAGAGTCCAGCCAATGGAGGTCAGCAGGGCAGTCACCTGGCCCATaGTCACCAAGGGCTCCACACGGACAATCTGTAATCCCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: GESSQWRSAGQSPGP*SPRAPHGQSVIPVL
Trigger: AAGCACTGGGATTACAGATTGTCCGTGTGGAGCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCTGACCTCCATTGGCTGGACTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648712.1
CDS-3UTR CAA 90 bp GCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTTTTGGTGCACATGAAGGTCTaGCTACCCTGCTCCTTCCAT +
Preference number: 5 (lower is better)
Translates to: APAAEQRGPTPTKTKWVLVHMKV*LPCSFH
Trigger: ATGGAAGGAGCAGGGTAGCAAGACCTTCATGTGCAC...CAAAACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGGTCTCACCCTTGGAACAGGCCGTACTaGTGGGATGATGACTCGATG +
Preference number: 5 (lower is better)
Translates to: ACPAPRGAARTACAGSHPWNRPY*WDDDSM
Trigger: CATCGAGTCATCATCCCACAAGTACGGCCTGTTCCA...AGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GCACCAGCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGGTCTCGGAAGATGGGGTTGTaGCCAAAGGGGATAATGTCC +
Preference number: 5 (lower is better)
Translates to: APACPAPRGAARTACAGSRKMGL*PKGIMS
Trigger: GGACATTATCCCCTTTGGCAACAACCCCATCTTCCG...AGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp TCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTGGAAAGCAGCCAAGCTaGAGTGAAGGGAAGATGCCT +
Preference number: 5 (lower is better)
Translates to: SCEDLVWLMEAMAGQLQRGKQPS*SEGKMP
Trigger: AGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCC...ACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CCCAGCCCCTGCTGCAGAGCAGCGCGGACCCACTCCCACCAAGACAAAGTGGGTAAGACAAAGTGGGTTTaGGGAAAGATGAGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: PSPCCRAARTHSHQDKVGKTKWV*GKMRPA
Trigger: TGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTT...ACCCACTTTGTCTTGGTGGGAGTGGGTCCGCGCTGCTCTGCAGCAGGGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AATGCCTTCTCCAGGAACACAGGGCACTCCGAGTGGACTCAGTGGTGGCTGGGGTCAGAGGACAATGACTaGCCCACGTTGCACAGCTCG +
Preference number: 5 (lower is better)
Translates to: NAFSRNTGHSEWTQWWLGSEDND*PTLHSS
Trigger: CGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGA...CCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGTGTTCCTGGAGAAGGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AATGCCTTCTCCAGGAACACAGGGCACTCCGAGTGGACTCAGTGGTGGCTGGGGGGTAGGGTGGTTCCTTaGCCTTCTGAGTGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: NAFSRNTGHSEWTQWWLGGRVVP*PSECLD
Trigger: ATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACC...CCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGTGTTCCTGGAGAAGGCATT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp ATGGGTAGGGTGGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACGGTAGGGTGGTTCCTTaGCCTTCTGAGTGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: MGRVVPLPSECLDAPSPHGRVVP*PSECLD
Trigger: ATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACC...GTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp TCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGATGGCAGGGCAACTCCAGCGTCCTCTCTCCTTAGCTTaGGCCTTTCCATCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: SCEDLVWLMEAMAGQLQRPLSLA*AFPSGA
Trigger: TGCTCCAGATGGAAAGGCCAAAGCTAAGGAGAGAGG...ACGCTGGAGTTGCCCTGCCATCGCCTCCATCAGCCAGACGAGGTCCTCACAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR CAA 90 bp GGAAGCAACAAGAGCTACCACTTACCCAGCACCTTCAATGTGACCAGTGCTCAAGGAGCGCTGCTGAGCTaGAACACCACCCAGGCGCGC +
Preference number: 5 (lower is better)
Translates to: GSNKSYHLPSTFNVTSAQGALLS*NTTQAR
Trigger: GCGCGCCTGGGTGGTGTTCAAGCTCAGCAGCGCTCC...TTGAGCACTGGTCACATTGAAGGTGCTGGGTAAGTGGTAGCTCTTGTTGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp ACGGCACCAAGGATGGCAGGGAGAACTTTGGCCTCGGACCTGGCTTTGGCACAGGTGCACATGAAGGTCTaGCTACCCTGCTCCTTCCAT +
Preference number: 5 (lower is better)
Translates to: TAPRMAGRTLASDLALAQVHMKV*LPCSFH
Trigger: ATGGAAGGAGCAGGGTAGCAAGACCTTCATGTGCAC...CTGTGCCAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCATCCTTGGTGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CCCCAGCCCTCACAAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTTGGAACAGGCCGTACTaGTGGGATGATGACTCGATG +
Preference number: 5 (lower is better)
Translates to: PQPSQDPAKTLAVCQALGWNRPY*WDDDSM
Trigger: CATCGAGTCATCATCCCACAAGTACGGCCTGTTCCA...ACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCAGCAGTGCAGATGTGTaGGAACAGGCCGTACTTGTG +
Preference number: 5 (lower is better)
Translates to: GGDGRATPAYPLHHSSHGSSADV*EQAVLV
Trigger: CACAAGTACGGCCTGTTCCAACACATCTGCACTGCT...GCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AGGGTGGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACAAGACCAGCTTGACGTACTTCTaGGCAGGGATGATGCGGATC +
Preference number: 5 (lower is better)
Translates to: RVVPLPSECLDAPSPHKTSLTYF*AGMMRI
Trigger: GATCCGCATCATCCCTGCCAAGAAGTACGTCAAGCT...GGTCTTGTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTGGCTCGAAACGCAGCTaGACGTACTTCTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: GLKPRSPDSHATTMTGSAGSKRS*TYFLAG
Trigger: CCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGCC...AGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GATGGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCTCGAAACGCAGCTaGACGTACTTCTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: DGGDGRATPAYPLHHSSHGSKRS*TYFLAG
Trigger: CCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGCC...ATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AATGCCTTCTCCAGGAACACAGGGCACTCCGAGTGGACTCAGTGGTGGCTGGGGCCAATGCTATTCAGCTaGCTGGGCTCTGCCTCATCT +
Preference number: 5 (lower is better)
Translates to: NAFSRNTGHSEWTQWWLGPMLFS*LGSASS
Trigger: AGATGAGGCAGAGCCCAGCAAGCTGAATAGCATTGG...CCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGTGTTCCTGGAGAAGGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp ATCTTGTCGTACACCTCGGGGAAGGCGTCCTGGCAACCCAGCTTCTCTCGCAGCCCAATGCTATTCAGCTaGCTGGGCTCTGCCTCATCT +
Preference number: 5 (lower is better)
Translates to: ILSYTSGKASWQPSFSRSPMLFS*LGSASS
Trigger: AGATGAGGCAGAGCCCAGCAAGCTGAATAGCATTGG...GCTGCGAGAGAAGCTGGGTTGCCAGGACGCCTTCCCCGAGGTGTACGACAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp ATGGGTAGGGTGGTTCCTTTGCCTTCTGAGTGCCTGGATGCCCCCAGCCCTCACCGGAAGATGGGGTTGTaGCCAAAGGGGATAATGTCC +
Preference number: 5 (lower is better)
Translates to: MGRVVPLPSECLDAPSPHRKMGL*PKGIMS
Trigger: GGACATTATCCCCTTTGGCAACAACCCCATCTTCCG...GTGAGGGCTGGGGGCATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATGGCCGGAAGATGGGGTTGTaGCCAAAGGGGATAATGTCC +
Preference number: 5 (lower is better)
Translates to: GGDGRATPAYPLHHSSHGRKMGL*PKGIMS
Trigger: GGACATTATCCCCTTTGGCAACAACCCCATCTTCCG...GCCATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACTTCAGGAGGGAGATCTaGGGAGGCACCATCCAGCCA +
Preference number: 5 (lower is better)
Translates to: KTLLRHWQCAKPWVGWVNFRREI*GGTIQP
Trigger: TGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGAA...GTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CCCCAGCCCTCACAAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTAGCTTCTCTCGCAGCTaGTGGTACAAGGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: PQPSQDPAKTLAVCQALGSFSRS*WYKEPS
Trigger: TGATGGCTCCTTGTACCACAAGCTGCGAGAGAAGCT...ACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AATGCCTTCTCCAGGAACACAGGGCACTCCGAGTGGACTCAGTGGTGGCTGGGGAGCTTCTCTCGCAGCTaGTGGTACAAGGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: NAFSRNTGHSEWTQWWLGSFSRS*WYKEPS
Trigger: TGATGGCTCCTTGTACCACAAGCTGCGAGAGAAGCT...CCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGTGTTCCTGGAGAAGGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CTCCAGCTGCCTCATGCAGGACCTGGCTTCAAAGTGTTTCACACGCGGCTCCCCGGAAAGCAGCCAAGCTaGAGTGAAGGGAAGATGCCT +
Preference number: 5 (lower is better)
Translates to: LQLPHAGPGFKVFHTRLPGKQPS*SEGKMP
Trigger: AGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCC...GGGGAGCCGCGTGTGAAACACTTTGAAGCCAGGTCCTGCATGAGGCAGCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp ACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGCAGTTCTTAAGAGGAGCGCTGCTGAGCTaGAACACCACCCAGGCGCGC +
Preference number: 5 (lower is better)
Translates to: TQFLLRFGFSAEAGQFLRGALLS*NTTQAR
Trigger: GCGCGCCTGGGTGGTGTTCAAGCTCAGCAGCGCTCC...TCTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp TCCCCTGGATCCAATTCAGAGCGGAGACCACTCTCTCCACCTAGGTGTCCCAGGAGCAGTGCAGATGTGTaGGAACAGGCCGTACTTGTG +
Preference number: 5 (lower is better)
Translates to: SPGSNSERRPLSPPRCPRSSADV*EQAVLV
Trigger: CACAAGTACGGCCTGTTCCAACACATCTGCACTGCT...CCTGGGACACCTAGGTGGAGAGAGTGGTCTCCGCTCTGAATTGGATCCAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GGACCAGCTCGTAAGCAGTGCAGATGTGTTGGAACAGGCCGTACTTGTGGGATGGACTCGTGGGTGAACTaGGCACAGATAGCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GPARKQCRCVGTGRTCGMDSWVN*AQIASR
Trigger: CCTGGAGGCTATCTGTGCCAAGTTCACCCACGAGTC...CATCCCACAAGTACGGCCTGTTCCAACACATCTGCACTGCTTACGAGCTGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GGACCAGCTCGTAAGCAGTGCAGATGTGTTGGAACAGGCCGTACTTGTGGGATGTTCAGGAGGGAGATCTaGGGAGGCACCATCCAGCCA +
Preference number: 5 (lower is better)
Translates to: GPARKQCRCVGTGRTCGMFRREI*GGTIQP
Trigger: TGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGAA...CATCCCACAAGTACGGCCTGTTCCAACACATCTGCACTGCTTACGAGCTGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CTTCAGGAGGGAGATCTTGGGAGGCACCATCCAGCCAAAGAGGTAGCGGAAGATGACGTGGATGTCGTTTaGGAAGGTGTGCAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: LQEGDLGRHHPAKEVAEDDVDVV*EGVQGL
Trigger: CAGGCCCTGCACACCTTCCAAAACGACATCCACGTC...ATCTTCCGCTACCTCTTTGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GCCCTCTGCCATCCCCAGGCAACTACTGATGCGCTATCAGTATGGATTCATGTGGCGGCCTTGCAGATCTaGTCGTACACCTCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: ALCHPQATTDALSVWIHVAALQI*SYTSGK
Trigger: CTTCCCCGAGGTGTACGACAAGATCTGCAAGGCCGC...CACATGAATCCATACTGATAGCGCATCAGTAGTTGCCTGGGGATGGCAGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR CAA 90 bp GGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATGGAACTTTCTCTCAGTGCCTGGCGGCCTaGCAGATCTTGTCGTACACC +
Preference number: 5 (lower is better)
Translates to: GKDLGRFPSLWNGNGTFSQCLAA*QILSYT
Trigger: GGTGTACGACAAGATCTGCAAGGCCGCCAGGCACTG...AGAGAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CACCAAGACAAAGTGGGTTTTGGGAAAGATGAGGCCTGCAGGGTTGGTGAGCCACAGTGCCTGGCGGCCTaGCAGATCTTGTCGTACACC +
Preference number: 5 (lower is better)
Translates to: HQDKVGFGKDEACRVGEPQCLAA*QILSYT
Trigger: GGTGTACGACAAGATCTGCAAGGCCGCCAGGCACTG...TGGCTCACCAACCCTGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GGGAAGATGCCTGACCACTCACACGTGTCTGTCTCTCCAGGCGGGCTCCAGCTCAAGAGGGATGAGTGGTaGGAGAAATCAAGTCGATGC +
Preference number: 5 (lower is better)
Translates to: GKMPDHSHVSVSPGGLQLKRDEW*EKSSRC
Trigger: GCATCGACTTGATTTCTCCAACCACTCATCCCTCTT...GAGCTGGAGCCCGCCTGGAGAGACAGACACGTGTGAGTGGTCAGGCATCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AGTAGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGCAGTGTGCCAAGCCTaGGGTGGGATGGGTGAACAC +
Preference number: 5 (lower is better)
Translates to: SREGLKPRSPDSHATTMTAVCQA*GGMGEH
Trigger: GTGTTCACCCATCCCACCCAAGGCTTGGCACACTGC...AGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGGCAGTGTGCCAAGCCTaGGGTGGGATGGGTGAACAC +
Preference number: 5 (lower is better)
Translates to: RHNHDWLSSLNSSFPYMTAVCQA*GGMGEH
Trigger: GTGTTCACCCATCCCACCCAAGGCTTGGCACACTGC...CGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CCCCAGCCCTCACAAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTTTTCCAAGCCCCGGGTaGTGGATAAGGTCTGGATTT +
Preference number: 5 (lower is better)
Translates to: PQPSQDPAKTLAVCQALGFPSPG*WIRSGF
Trigger: AAATCCAGACCTTATCCACAACCCGGGGCTTGGAAA...ACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTTGTGAGGGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GCGCGTGTGGCGGTGGTAGTAGTGTCTCAAGGGAATGTACTCCAGGCCCTCTCGTTCATGCCTTTCTCCTaGGCCCCCATGACCAAAGAA +
Preference number: 5 (lower is better)
Translates to: ARVAVVVVSQGNVLQALSFMPFS*APMTKE
Trigger: TTCTTTGGTCATGGGGGCCAAGGAGAAAGGCATGAA...CGAGAGGGCCTGGAGTACATTCCCTTGAGACACTACTACCACCGCCACACGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CTCGAAACGCAGCTTGACGTACTTCTTGGCAGGGATGATGCGGATCTCAGCGGCGTGCACATGAAGGTCTaGCTACCCTGCTCCTTCCAT +
Preference number: 5 (lower is better)
Translates to: LETQLDVLLGRDDADLSGVHMKV*LPCSFH
Trigger: ATGGAAGGAGCAGGGTAGCAAGACCTTCATGTGCAC...GCCGCTGAGATCCGCATCATCCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CTGTGCACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGACTCGTGGGTGAACTaGGCACAGATAGCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LCTGDLMWSLFRLHCRCDDSWVN*AQIASR
Trigger: CCTGGAGGCTATCTGTGCCAAGTTCACCCACGAGTC...GTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGTGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGTTCAGGAGGGAGATCTaGGGAGGCACCATCCAGCCA +
Preference number: 5 (lower is better)
Translates to: RHNHDWLSSLNSSFPYMTFRREI*GGTIQP
Trigger: TGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGAA...CGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GGAAGCAACAAGAGCTACCACTTACCCAGCACCTTCAATGTGACCAGTGCTCAATGCTGCTCGTACAGCTaGCGCAGGGTCTCACCCTGG +
Preference number: 5 (lower is better)
Translates to: GSNKSYHLPSTFNVTSAQCCSYS*RRVSPW
Trigger: CCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCA...TTGAGCACTGGTCACATTGAAGGTGCTGGGTAAGTGGTAGCTCTTGTTGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GGGAGGTTCCCTTCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGCTGCTCGTACAGCTaGCGCAGGGTCTCACCCTGG +
Preference number: 5 (lower is better)
Translates to: GRFPSLWNGNGTFSELRICCSYS*RRVSPW
Trigger: CCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCA...AATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATGGAACTTTCTCTGACGTGGATGTCGTTTaGGAAGGTGTGCAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: GKDLGRFPSLWNGNGTFSDVDVV*EGVQGL
Trigger: CAGGCCCTGCACACCTTCCAAAACGACATCCACGTC...AGAGAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GATGGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATAGCTTCTCTCGCAGCTaGTGGTACAAGGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: DGGDGRATPAYPLHHSSHSFSRS*WYKEPS
Trigger: TGATGGCTCCTTGTACCACAAGCTGCGAGAGAAGCT...ATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGGCGGCCTTGCAGATCTaGTCGTACACCTCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: RDEWLEKSSRCSFLPAPRAALQI*SYTSGK
Trigger: CTTCCCCGAGGTGTACGACAAGATCTGCAAGGCCGC...CCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCCAGTGCCTGGCGGCCTaGCAGATCTTGTCGTACACC +
Preference number: 5 (lower is better)
Translates to: NQALRYNKPGKDLGRFPSQCLAA*QILSYT
Trigger: GGTGTACGACAAGATCTGCAAGGCCGCCAGGCACTG...GGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTGGAAAGCAGCCAAGCTaGAGTGAAGGGAAGATGCCT +
Preference number: 5 (lower is better)
Translates to: GLKPRSPDSHATTMTGSAGKQPS*SEGKMP
Trigger: AGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCC...AGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp ACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCACATGGCAGGGAGAACTTaGGCCTCGGACCTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: TADVTLNGKQQELPLTQHMAGRT*ASDLAL
Trigger: CAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCAT...GTGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AATGCCTTCTCCAGGAACACAGGGCACTCCGAGTGGACTCAGTGGTGGCTGGGGAAGAGGGATGAGTGGTaGGAGAAATCAAGTCGATGC +
Preference number: 5 (lower is better)
Translates to: NAFSRNTGHSEWTQWWLGKRDEW*EKSSRC
Trigger: GCATCGACTTGATTTCTCCAACCACTCATCCCTCTT...CCCCAGCCACCACTGAGTCCACTCGGAGTGCCCTGTGTTCCTGGAGAAGGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GGTGGGGAAGAGCTGTCCTTCTCCTGTGAGGACCTCGTCTGGCTGATGGAGGCGTTTTTGTGTGTCTTCTaGTACTTCCCGACACGTAGT +
Preference number: 5 (lower is better)
Translates to: GGEELSFSCEDLVWLMEAFLCVF*YFPTRS
Trigger: ACTACGTGTCGGGAAGTACAAGAAGACACACAAAAA...CGCCTCCATCAGCCAGACGAGGTCCTCACAGGAGAAGGACAGCTCTTCCCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp TGCAGCTCAGAGGACAATGACTTGCCCACGTTGCACAGCTCGCTGACAGTAGAGTGGAACAGGCCGTACTaGTGGGATGATGACTCGATG +
Preference number: 5 (lower is better)
Translates to: CSSEDNDLPTLHSSLTVEWNRPY*WDDDSM
Trigger: CATCGAGTCATCATCCCACAAGTACGGCCTGTTCCA...CTCTACTGTCAGCGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AGTCGGCATACAGCATCTGGAAGCCATGCACGCTGCGGACAAACTTCTCCAGCTAGCTTGACGTACTTCTaGGCAGGGATGATGCGGATC +
Preference number: 5 (lower is better)
Translates to: SRHTASGSHARCGQTSPASLTYF*AGMMRI
Trigger: GATCCGCATCATCCCTGCCAAGAAGTACGTCAAGCT...AGCTGGAGAAGTTTGTCCGCAGCGTGCATGGCTTCCAGATGCTGTATGCCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000648728.1
CDS-3UTR CAA 90 bp AGTGTGGATCTAGGAAAGCAGCCAAGCTTGAGTGAAGGGAAGATGCCTGACCACGGCTCGAAACGCAGCTaGACGTACTTCTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: SVDLGKQPSLSEGKMPDHGSKRS*TYFLAG
Trigger: CCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGCC...GTGGTCAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCCTAGATCCACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCGGCTCGAAACGCAGCTaGACGTACTTCTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: NQALRYNKPGKDLGRFPSGSKRS*TYFLAG
Trigger: CCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGCC...GGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AAAGAGGTAGCGGAAGATGGGGTTGTTGCCAAAGGGGATAATGTCCTGGAGCTCGACTCGTGGGTGAACTaGGCACAGATAGCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: KEVAEDGVVAKGDNVLELDSWVN*AQIASR
Trigger: CCTGGAGGCTATCTGTGCCAAGTTCACCCACGAGTC...GAGCTCCAGGACATTATCCCCTTTGGCAACAACCCCATCTTCCGCTACCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AGTCGGCATACAGCATCTGGAAGCCATGCACGCTGCGGACAAACTTCTCCAGCTCGGAAGATGGGGTTGTaGCCAAAGGGGATAATGTCC +
Preference number: 5 (lower is better)
Translates to: SRHTASGSHARCGQTSPARKMGL*PKGIMS
Trigger: GGACATTATCCCCTTTGGCAACAACCCCATCTTCCG...AGCTGGAGAAGTTTGTCCGCAGCGTGCATGGCTTCCAGATGCTGTATGCCGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647912.1
ENST00000648728.1
CDS-3UTR CAA 90 bp ACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGCTGAAGACGTGGATGTCGTTTaGGAAGGTGTGCAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: TGDLMWSLFRLHCRCDAEDVDVV*EGVQGL
Trigger: CAGGCCCTGCACACCTTCCAAAACGACATCCACGTC...TTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GGAGTTCTGGAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAAGCGCGGCCTTGCAGATCTaGTCGTACACCTCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: GVLEGFLFESVDLGKQPSAALQI*SYTSGK
Trigger: CTTCCCCGAGGTGTACGACAAGATCTGCAAGGCCGC...GCTTGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCCAGAACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACGGCTTTCCGTGGGTTTaGCAACCACAGTGTCTAAGA +
Preference number: 5 (lower is better)
Translates to: KTLLRHWQCAKPWVGWVNGFPWV*QPQCLR
Trigger: TCTTAGACACTGTGGTTGCAAAACCCACGGAAAGCC...GTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GGAGTTCTGGAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCAAGCGCAGTGTGCCAAGCCTaGGGTGGGATGGGTGAACAC +
Preference number: 5 (lower is better)
Translates to: GVLEGFLFESVDLGKQPSAVCQA*GGMGEH
Trigger: GTGTTCACCCATCCCACCCAAGGCTTGGCACACTGC...GCTTGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCCAGAACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GCACCAGCATGTCCTGCACCACGTGGTGCTGCTCGTACAGCTTGCGCAGGGTCTCACAATTGGATAAGCTaGACACATGCATGCAACCAA +
Preference number: 5 (lower is better)
Translates to: APACPAPRGAARTACAGSHNWIS*THACNQ
Trigger: TTGGTTGCATGCATGTGTCAAGCTTATCCAATTGTG...AGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR CAA 90 bp CCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTCCCTTAATTTGGAACAGGCCGTACTaGTGGGATGATGACTCGATG +
Preference number: 5 (lower is better)
Translates to: PRSPDSHATTMTGSAPLIWNRPY*WDDDSM
Trigger: CATCGAGTCATCATCCCACAAGTACGGCCTGTTCCA...AATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp TACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGCAGTTCGACTCGTGGGTGAACTaGGCACAGATAGCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: YMTQFLLRFGFSAEAGQFDSWVN*AQIASR
Trigger: CCTGGAGGCTATCTGTGCCAAGTTCACCCACGAGTC...GAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CTAGGAAAGCAGCCAAGCTTGAGTGAAGGGAAGATGCCTGACCACTCACACGTGCCAATGCTATTCAGCTaGCTGGGCTCTGCCTCATCT +
Preference number: 5 (lower is better)
Translates to: LGKQPSLSEGKMPDHSHVPMLFS*LGSASS
Trigger: AGATGAGGCAGAGCCCAGCAAGCTGAATAGCATTGG...CACGTGTGAGTGGTCAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp ACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCACCCAGGCCCTCTCGGTTaGTCTTCAGATAGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: TADVTLNGKQQELPLTQHPGPLG*SSDSSP
Trigger: TGGAGAACTATCTGAAGACAAACCGAGAGGGCCTGG...GTGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTTCAGGAGGGAGATCTaGGGAGGCACCATCCAGCCA +
Preference number: 5 (lower is better)
Translates to: NNQALRYNKPGKDLGRFPFRREI*GGTIQP
Trigger: TGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGAA...AGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp TCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGTGGGGAGTTGCTGCTCGTACAGCTaGCGCAGGGTCTCACCCTGG +
Preference number: 5 (lower is better)
Translates to: SELRICKALKLTTAGVGSCCSYS*RRVSPW
Trigger: CCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCA...ACTCCCCACCCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATGGAACTTTCTCTAGCTTCTCTCGCAGCTaGTGGTACAAGGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: GKDLGRFPSLWNGNGTFSSFSRS*WYKEPS
Trigger: TGATGGCTCCTTGTACCACAAGCTGCGAGAGAAGCT...AGAGAAAGTTCCATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GTAGTGTCTCAAGGGAATGTACTCCAGGCCCTCTCGGTTTGTCTTCAGATAGTTGCGGCCTTGCAGATCTaGTCGTACACCTCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: VVSQGNVLQALSVCLQIVAALQI*SYTSGK
Trigger: CTTCCCCGAGGTGTACGACAAGATCTGCAAGGCCGC...AACTATCTGAAGACAAACCGAGAGGGCCTGGAGTACATTCCCTTGAGACACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AGTAGAGAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGAAAGCAGCCAAGCTaGAGTGAAGGGAAGATGCCT +
Preference number: 5 (lower is better)
Translates to: SREGLKPRSPDSHATTMTGKQPS*SEGKMP
Trigger: AGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCC...AGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTCTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp ACTGCAGATGTGACGCTGAACGGGAAGCAACAAGAGCTACCACTTACCCAGCACGGAAAGCAGCCAAGCTaGAGTGAAGGGAAGATGCCT +
Preference number: 5 (lower is better)
Translates to: TADVTLNGKQQELPLTQHGKQPS*SEGKMP
Trigger: AGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCC...GTGCTGGGTAAGTGGTAGCTCTTGTTGCTTCCCGTTCAGCGTCACATCTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTAAGACAAAGTGGGTTTaGGGAAAGATGAGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: GLKPRSPDSHATTMTGSAKTKWV*GKMRPA
Trigger: TGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTT...AGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACAAGAGGGATGAGTGGTaGGAGAAATCAAGTCGATGC +
Preference number: 5 (lower is better)
Translates to: KTLLRHWQCAKPWVGWVNKRDEW*EKSSRC
Trigger: GCATCGACTTGATTTCTCCAACCACTCATCCCTCTT...GTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp TATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATTCAGAGGACAATGACTaGCCCACGTTGCACAGCTCG +
Preference number: 5 (lower is better)
Translates to: YNKPGKDLGRFPSLWNGNSEDND*PTLHSS
Trigger: CGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGA...ATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CTGATTCTAAAGAAAACCTTCATGCAGCCAAGAAACTCAGGGCTCTGGAGGGGAGCAGTGTGCCAAGCCTaGGGTGGGATGGGTGAACAC +
Preference number: 5 (lower is better)
Translates to: LILKKTFMQPRNSGLWRGAVCQA*GGMGEH
Trigger: GTGTTCACCCATCCCACCCAAGGCTTGGCACACTGC...TCCCCTCCAGAGCCCTGAGTTTCTTGGCTGCATGAAGGTTTTCTTTAGAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CAA 90 bp TGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGAGCAGTGTGCCAAGCCTaGGGTGGGATGGGTGAACAC +
Preference number: 5 (lower is better)
Translates to: WLSSLNSSFPYMTQFLLRAVCQA*GGMGEH
Trigger: GTGTTCACCCATCCCACCCAAGGCTTGGCACACTGC...TCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTGACCTTGTGCACATGAAGGTCTaGCTACCCTGCTCCTTCCAT +
Preference number: 5 (lower is better)
Translates to: LPCKPGMSLSGNEMGADLVHMKV*LPCSFH
Trigger: ATGGAAGGAGCAGGGTAGCAAGACCTTCATGTGCAC...AAGGTCAGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCAGCAGTGCAGATGTGTaGGAACAGGCCGTACTTGTG +
Preference number: 5 (lower is better)
Translates to: NQALRYNKPGKDLGRFPSSSADV*EQAVLV
Trigger: CACAAGTACGGCCTGTTCCAACACATCTGCACTGCT...GGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp ACCGGAGGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGCTTGACGTACTTCTaGGCAGGGATGATGCGGATC +
Preference number: 5 (lower is better)
Translates to: TGGCDSKIPSFPSPGLWISLTYF*AGMMRI
Trigger: GATCCGCATCATCCCTGCCAAGAAGTACGTCAAGCT...TATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCCTCCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AGTGTGGATCTAGGAAAGCAGCCAAGCTTGAGTGAAGGGAAGATGCCTGACCACCCAGGCCCTCTCGGTTaGTCTTCAGATAGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: SVDLGKQPSLSEGKMPDHPGPLG*SSDSSP
Trigger: TGGAGAACTATCTGAAGACAAACCGAGAGGGCCTGG...GTGGTCAGGCATCTTCCCTTCACTCAAGCTTGGCTGCTTTCCTAGATCCACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGCCAGGCCCTCTCGGTTaGTCTTCAGATAGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: RDEWLEKSSRCSFLPAPRPGPLG*SSDSSP
Trigger: TGGAGAACTATCTGAAGACAAACCGAGAGGGCCTGG...CCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CGTCCCAGTGGCTTAGGGTTGGAGGCTTCACTGGCAAAACAATGGCACTGTTTACCAGGCCCTCTCGGTTaGTCTTCAGATAGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: RPSGLGLEASLAKQWHCLPGPLG*SSDSSP
Trigger: TGGAGAACTATCTGAAGACAAACCGAGAGGGCCTGG...TAAACAGTGCCATTGTTTTGCCAGTGAAGCCTCCAACCCTAAGCCACTGGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CAA 90 bp ACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGCAGTTCTTAAGAATGGCAGGGAGAACTTaGGCCTCGGACCTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: TQFLLRFGFSAEAGQFLRMAGRT*ASDLAL
Trigger: CAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCAT...TCTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGGGCTTTCCGTGGGTTTaGCAACCACAGTGTCTAAGA +
Preference number: 5 (lower is better)
Translates to: RHNHDWLSSLNSSFPYMTGFPWV*QPQCLR
Trigger: TCTTAGACACTGTGGTTGCAAAACCCACGGAAAGCC...CGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp ATCTGTCATGACCCCTGTCATAATGACAGCCTCATCCAGGGAGTAGAGCAGCCCGGCTTTCCGTGGGTTTaGCAACCACAGTGTCTAAGA +
Preference number: 5 (lower is better)
Translates to: ICHDPCHNDSLIQGVEQPGFPWV*QPQCLR
Trigger: TCTTAGACACTGTGGTTGCAAAACCCACGGAAAGCC...GGGCTGCTCTACTCCCTGGATGAGGCTGTCATTATGACAGGGGTCATGACAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGTAGGGTGGTTCCTTaGCCTTCTGAGTGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: RGMSGWRNQVDALFFQPHGRVVP*PSECLD
Trigger: ATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACC...GTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAGCTCCCTTAATTTTCATGCCTTTCTCCTaGGCCCCCATGACCAAAGAA +
Preference number: 5 (lower is better)
Translates to: PRSPDSHATTMTGSAPLIFMPFS*APMTKE
Trigger: TTCTTTGGTCATGGGGGCCAAGGAGAAAGGCATGAA...AATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCCCCCTTAGTTATCCGTaGCCCTCTGCCATCCCCAGG +
Preference number: 5 (lower is better)
Translates to: LSSLNSSFPYMTQFLLRFPLSYP*PSAIPR
Trigger: CCTGGGGATGGCAGAGGGCAACGGATAACTAAGGGG...GAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR CAA 90 bp AAGACCCTGCTAAGACACTGGCAGTGTGCCAAGCCTTGGGTGGGATGGGTGAACTTTTTGTGTGTCTTCTaGTACTTCCCGACACGTAGT +
Preference number: 5 (lower is better)
Translates to: KTLLRHWQCAKPWVGWVNFLCVF*YFPTRS
Trigger: ACTACGTGTCGGGAAGTACAAGAAGACACACAAAAA...GTTCACCCATCCCACCCAAGGCTTGGCACACTGCCAGTGTCTTAGCAGGGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GGAAGCAACAAGAGCTACCACTTACCCAGCACCTTCAATGTGACCAGTGCTCAAAGCAGTGCAGATGTGTaGGAACAGGCCGTACTTGTG +
Preference number: 5 (lower is better)
Translates to: GSNKSYHLPSTFNVTSAQSSADV*EQAVLV
Trigger: CACAAGTACGGCCTGTTCCAACACATCTGCACTGCT...TTGAGCACTGGTCACATTGAAGGTGCTGGGTAAGTGGTAGCTCTTGTTGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp ACCCAGCACCTTCAATGTGACCAGTGCTCAACTCAGATGACAACAACCTGCAAGAGCAGTGCAGATGTGTaGGAACAGGCCGTACTTGTG +
Preference number: 5 (lower is better)
Translates to: TQHLQCDQCSTQMTTTCKSSADV*EQAVLV
Trigger: CACAAGTACGGCCTGTTCCAACACATCTGCACTGCT...CTTGCAGGTTGTTGTCATCTGAGTTGAGCACTGGTCACATTGAAGGTGCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTAGCTTGACGTACTTCTaGGCAGGGATGATGCGGATC +
Preference number: 5 (lower is better)
Translates to: GCDSKIPSFPSPGLWIRSSLTYF*AGMMRI
Trigger: GATCCGCATCATCCCTGCCAAGAAGTACGTCAAGCT...AGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCGACTCGTGGGTGAACTaGGCACAGATAGCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: KRGMSGWRNQVDALFFQPDSWVN*AQIASR
Trigger: CCTGGAGGCTATCTGTGCCAAGTTCACCCACGAGTC...GGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp ATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACGGTGAGCCAATGCTATTCAGCTaGCTGGGCTCTGCCTCATCT +
Preference number: 5 (lower is better)
Translates to: MSGWRNQVDALFFQPHGEPMLFS*LGSASS
Trigger: AGATGAGGCAGAGCCCAGCAAGCTGAATAGCATTGG...CTCACCGTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCCACAGCTTCTCTCGCAGCTaGTGGTACAAGGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: RGMSGWRNQVDALFFQPHSFSRS*WYKEPS
Trigger: TGATGGCTCCTTGTACCACAAGCTGCGAGAGAAGCT...GTGGGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCATGGCAGGGAGAACTTaGGCCTCGGACCTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: KRGMSGWRNQVDALFFQPMAGRT*ASDLAL
Trigger: CAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCAT...GGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GATGGAGGCGATGGCAGGGCAACTCCAGCGTATCCCCTTCATCATTCCAGCCATATAAACAACCAAGCTTaGCGTTATAACAAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: DGGDGRATPAYPLHHSSHINNQA*RYNKPG
Trigger: CCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTAT...ATGGCTGGAATGATGAAGGGGATACGCTGGAGTTGCCCTGCCATCGCCTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTGGATTTTGGTTATATGACGGTAGGGTGGTTCCTTaGCCTTCTGAGTGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: PSFPSPGLWIRSGFWLYDGRVVP*PSECLD
Trigger: ATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACC...GTCATATAACCAAAATCCAGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AACTCCATCCAAAACCATCACATGGATGGCCAGGGACAGGACTGGCTACAAAAAGGTAGGGTGGTTCCTTaGCCTTCTGAGTGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: NSIQNHHMDGQGQDWLQKGRVVP*PSECLD
Trigger: ATCCAGGCACTCAGAAGGCAAAGGAACCACCCTACC...TTTTTGTAGCCAGTCCTGTCCCTGGCCATCCATGTGATGGTTTTGGATGGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CAGATGCTTCCCTGCAAGCCAGGTATGAGCCTTTCTGGAAATGAGATGGGAGCTTTTCCAAGCCCCGGGTaGTGGATAAGGTCTGGATTT +
Preference number: 5 (lower is better)
Translates to: QMLPCKPGMSLSGNEMGAFPSPG*WIRSGF
Trigger: AAATCCAGACCTTATCCACAACCCGGGGCTTGGAAA...AGCTCCCATCTCATTTCCAGAAAGGCTCATACCTGGCTTGCAGGGAAGCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CAA 90 bp TATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATTTCATGCCTTTCTCCTaGGCCCCCATGACCAAAGAA +
Preference number: 5 (lower is better)
Translates to: YNKPGKDLGRFPSLWNGNFMPFS*APMTKE
Trigger: TTCTTTGGTCATGGGGGCCAAGGAGAAAGGCATGAA...ATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCGCCCTAAGGAACCAGTaGATAGGCTTGGGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: KRGMSGWRNQVDALFFQPALRNQ*IGLGLL
Trigger: CAGGAGCCCCAAGCCTATCAACTGGTTCCTTAGGGC...GGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR CAA 90 bp AGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGTGCACATGAAGGTCTaGCTACCCTGCTCCTTCCAT +
Preference number: 5 (lower is better)
Translates to: SFPYMTQFLLRFGFSAEAVHMKV*LPCSFH
Trigger: ATGGAAGGAGCAGGGTAGCAAGACCTTCATGTGCAC...AGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp TGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGAAGCTTGACGTACTTCTaGGCAGGGATGATGCGGATC +
Preference number: 5 (lower is better)
Translates to: WLSSLNSSFPYMTQFLLRSLTYF*AGMMRI
Trigger: GATCCGCATCATCCCTGCCAAGAAGTACGTCAAGCT...TCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAAGCGGCCTTGCAGATCTaGTCGTACACCTCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: LWNGNGTFSELRICKALKAALQI*SYTSGK
Trigger: CTTCCCCGAGGTGTACGACAAGATCTGCAAGGCCGC...TTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGCAGTGCCTGGCGGCCTaGCAGATCTTGTCGTACACC +
Preference number: 5 (lower is better)
Translates to: GTFSELRICKALKLTTAGQCLAA*QILSYT
Trigger: GGTGTACGACAAGATCTGCAAGGCCGCCAGGCACTG...CCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp ATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAAGGTCTGGATTTTGGTTATATATGGCAGGGAGAACTTaGGCCTCGGACCTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: IPSFPSPGLWIRSGFWLYMAGRT*ASDLAL
Trigger: CAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCAT...ATATAACCAAAATCCAGACCTTATCCACAACCCGGGGCTTGGAAAGGAAGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CAA 90 bp ACCGGAGGGTGTGATTCCAAAATACCTTCCTTTCCAAGCCCCGGGTTGTGGATAAAGACAAAGTGGGTTTaGGGAAAGATGAGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: TGGCDSKIPSFPSPGLWIKTKWV*GKMRPA
Trigger: TGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTT...TATCCACAACCCGGGGCTTGGAAAGGAAGGTATTTTGGAATCACACCCTCCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CAA 90 bp ACAGGTGACCTAATGTGGAGCCTTTTCAGGCTCCACTGCAGATGTGACGCTGAAAAGACAAAGTGGGTTTaGGGAAAGATGAGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: TGDLMWSLFRLHCRCDAEKTKWV*GKMRPA
Trigger: TGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTT...TTCAGCGTCACATCTGCAGTGGAGCCTGAAAAGGCTCCACATTAGGTCACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp TATAACAAGCCAGGGAAGGACCTAGGGAGGTTCCCTTCCCTCTGGAACGGAAATAAGAGGGATGAGTGGTaGGAGAAATCAAGTCGATGC +
Preference number: 5 (lower is better)
Translates to: YNKPGKDLGRFPSLWNGNKRDEW*EKSSRC
Trigger: GCATCGACTTGATTTCTCCAACCACTCATCCCTCTT...ATTTCCGTTCCAGAGGGAAGGGAACCTCCCTAGGTCCTTCCCTGGCTTGTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CGCAGCTTGTGGTACAAGGAGCCATCAAACATCTCCCAGAACTCCTCCCGGTTCATAAACAACCAAGCTTaGCGTTATAACAAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: RSLWYKEPSNISQNSSRFINNQA*RYNKPG
Trigger: CCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTAT...GAACCGGGAGGAGTTCTGGGAGATGTTTGATGGCTCCTTGTACCACAAGCTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp TCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGTGGGGAGTTCAGAGGACAATGACTaGCCCACGTTGCACAGCTCG +
Preference number: 5 (lower is better)
Translates to: SELRICKALKLTTAGVGSSEDND*PTLHSS
Trigger: CGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGA...ACTCCCCACCCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GAGGGGCTGAAACCTAGGTCTCCTGACTCACACGCCACAACCATGACTGGCTCAAATGGAGCAGTGGGGTaGTTTTCCTTTAATCTGTTA +
Preference number: 5 (lower is better)
Translates to: EGLKPRSPDSHATTMTGSNGAVG*FSFNLL
Trigger: TAACAGATTAAAGGAAAACAACCCCACTGCTCCATT...TGAGCCAGTCATGGTTGTGGCGTGTGAGTCAGGAGACCTAGGTTTCAGCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR CAA 90 bp CGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGTTTTTGTGTGTCTTCTaGTACTTCCCGACACGTAGT +
Preference number: 5 (lower is better)
Translates to: RHNHDWLSSLNSSFPYMTFLCVF*YFPTRS
Trigger: ACTACGTGTCGGGAAGTACAAGAAGACACACAAAAA...CGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AGTTGCATAAACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGTGGAACAGGCCGTACTaGTGGGATGATGACTCGATG +
Preference number: 5 (lower is better)
Translates to: SCINNQALRYNKPGKDLGWNRPY*WDDDSM
Trigger: CATCGAGTCATCATCCCACAAGTACGGCCTGTTCCA...CCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTATGCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp TCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGTGGGGAGTAGCAGTGCAGATGTGTaGGAACAGGCCGTACTTGTG +
Preference number: 5 (lower is better)
Translates to: SELRICKALKLTTAGVGSSSADV*EQAVLV
Trigger: CACAAGTACGGCCTGTTCCAACACATCTGCACTGCT...ACTCCCCACCCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AGTTGCATAAACAACCAAGCTTTGCGTTATAACAAGCCAGGGAAGGACCTAGGGAGCTTGACGTACTTCTaGGCAGGGATGATGCGGATC +
Preference number: 5 (lower is better)
Translates to: SCINNQALRYNKPGKDLGSLTYF*AGMMRI
Trigger: GATCCGCATCATCCCTGCCAAGAAGTACGTCAAGCT...CCCTAGGTCCTTCCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTATGCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp TCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGTGGGGAGTCCAATGCTATTCAGCTaGCTGGGCTCTGCCTCATCT +
Preference number: 5 (lower is better)
Translates to: SELRICKALKLTTAGVGSPMLFS*LGSASS
Trigger: AGATGAGGCAGAGCCCAGCAAGCTGAATAGCATTGG...ACTCCCCACCCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CCCAACTGCTCATTCTGCAGCCCAGAAAAGGCTTTTGGAGGATTTCTCTTGTTTCCAATGCTATTCAGCTaGCTGGGCTCTGCCTCATCT +
Preference number: 5 (lower is better)
Translates to: PNCSFCSPEKAFGGFLLFPMLFS*LGSASS
Trigger: AGATGAGGCAGAGCCCAGCAAGCTGAATAGCATTGG...AAACAAGAGAAATCCTCCAAAAGCCTTTTCTGGGCTGCAGAATGAGCAGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR CAA 90 bp TCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGCCAGGCCCTCTCGGTTaGTCTTCAGATAGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: SLWNGNGTFSELRICKALPGPLG*SSDSSP
Trigger: TGGAGAACTATCTGAAGACAAACCGAGAGGGCCTGG...CAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp TCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGTGGGGAGTCGGAAGATGGGGTTGTaGCCAAAGGGGATAATGTCC +
Preference number: 5 (lower is better)
Translates to: SELRICKALKLTTAGVGSRKMGL*PKGIMS
Trigger: GGACATTATCCCCTTTGGCAACAACCCCATCTTCCG...ACTCCCCACCCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGACGTGGATGTCGTTTaGGAAGGTGTGCAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: GTFSELRICKALKLTTAGDVDVV*EGVQGL
Trigger: CAGGCCCTGCACACCTTCCAAAACGACATCCACGTC...CCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGCCCAGCTTCTCTCGCAGCTaGTGGTACAAGGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: KRGMSGWRNQVDALFFQPSFSRS*WYKEPS
Trigger: TGATGGCTCCTTGTACCACAAGCTGCGAGAGAAGCT...GGGCTGGAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GAAAGAAAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCCAGTGCCTGGCGGCCTaGCAGATCTTGTCGTACACC +
Preference number: 5 (lower is better)
Translates to: ERKRGMSGWRNQVDALFFQCLAA*QILSYT
Trigger: GGTGTACGACAAGATCTGCAAGGCCGCCAGGCACTG...GAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTTTCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCAATGGCAGGGAGAACTTaGGCCTCGGACCTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: LNSSFPYMTQFLLRFGFSMAGRT*ASDLAL
Trigger: CAAAGCCAGGTCCGAGGCCAAAGTTCTCCCTGCCAT...TGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AACTCCATCCAAAACCATCACATGGATGGCCAGGGACAGGACTGGCTACAAAAAGGCTTTCCGTGGGTTTaGCAACCACAGTGTCTAAGA +
Preference number: 5 (lower is better)
Translates to: NSIQNHHMDGQGQDWLQKGFPWV*QPQCLR
Trigger: TCTTAGACACTGTGGTTGCAAAACCCACGGAAAGCC...TTTTTGTAGCCAGTCCTGTCCCTGGCCATCCATGTGATGGTTTTGGATGGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CAA 90 bp ACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGCAGTTCTTAAGATTTCCAAGCCCCGGGTaGTGGATAAGGTCTGGATTT +
Preference number: 5 (lower is better)
Translates to: TQFLLRFGFSAEAGQFLRFPSPG*WIRSGF
Trigger: AAATCCAGACCTTATCCACAACCCGGGGCTTGGAAA...TCTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CAA 90 bp TCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGGTGGGGAGTAACCAGTTGATAGGCTaGGGGCTCCTGGTTCTCCAT +
Preference number: 5 (lower is better)
Translates to: SELRICKALKLTTAGVGSNQLIG*GLLVLH
Trigger: ATGGAGAACCAGGAGCCCCAAGCCTATCAACTGGTT...ACTCCCCACCCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR CAA 90 bp CGCCACAACCATGACTGGCTCAGCTCCCTTAATTCCAGCTTCCCTTACATGACGGCCCAGAAAAGGCTTTaGGAGGATTTCTCTTGTTTA +
Preference number: 5 (lower is better)
Translates to: RHNHDWLSSLNSSFPYMTAQKRL*EDFSCL
Trigger: TAAACAAGAGAAATCCTCCAAAAGCCTTTTCTGGGC...CGTCATGTAAGGGAAGCTGGAATTAAGGGAGCTGAGCCAGTCATGGTTGTGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR CAA 90 bp TCTGATTCTAAAGAAAACCTTCATGCAGCCAAGAAACTCAGGGCTCTGGAGGGGAAGAGGGATGAGTGGTaGGAGAAATCAAGTCGATGC +
Preference number: 5 (lower is better)
Translates to: SDSKENLHAAKKLRALEGKRDEW*EKSSRC
Trigger: GCATCGACTTGATTTCTCCAACCACTCATCCCTCTT...CCCCTCCAGAGCCCTGAGTTTCTTGGCTGCATGAAGGTTTTCTTTAGAATCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GAAAGAAAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCTTCCATCTGGAGCAGTaGCCCCTGGACCCAGCTAAG +
Preference number: 5 (lower is better)
Translates to: ERKRGMSGWRNQVDALFFFHLEQ*PLDPAK
Trigger: CTTAGCTGGGTCCAGGGGCAACTGCTCCAGATGGAA...GAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTTTCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS-3UTR CAA 90 bp GTGGGAGTTCTGGAGGGGTTTCTCTTTGAAAGTGTGGATCTAGGAAAGCAGCCATTTTTGTGTGTCTTCTaGTACTTCCCGACACGTAGT +
Preference number: 5 (lower is better)
Translates to: VGVLEGFLFESVDLGKQPFLCVF*YFPTRS
Trigger: ACTACGTGTCGGGAAGTACAAGAAGACACACAAAAA...TGGCTGCTTTCCTAGATCCACACTTTCAAAGAGAAACCCCTCCAGAACTCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp AGAAAGAAAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTTTCAGGAGGGAGATCTaGGGAGGCACCATCCAGCCA +
Preference number: 5 (lower is better)
Translates to: RKKKRDEWLEKSSRCSFLFRREI*GGTIQP
Trigger: TGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGAA...AAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTTTCTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GAAAGAAAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCTCAGAGGACAATGACTaGCCCACGTTGCACAGCTCG +
Preference number: 5 (lower is better)
Translates to: ERKRGMSGWRNQVDALFFSEDND*PTLHSS
Trigger: CGAGCTGTGCAACGTGGGCAAGTCATTGTCCTCTGA...GAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTTTCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GAAAGAAAAAGAGGGATGAGTGGTTGGAGAAATCAAGTCGATGCTCTTTTCTTCGTGCACATGAAGGTCTaGCTACCCTGCTCCTTCCAT +
Preference number: 5 (lower is better)
Translates to: ERKRGMSGWRNQVDALFFVHMKV*LPCSFH
Trigger: ATGGAAGGAGCAGGGTAGCAAGACCTTCATGTGCAC...GAAGAAAAGAGCATCGACTTGATTTCTCCAACCACTCATCCCTCTTTTTCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp ACGCAATTCCTTCTCAGATTCGGGTTTTCAGCTGAGGCTGGGCAGTTCTTAAGAATAAACAACCAAGCTTaGCGTTATAACAAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: TQFLLRFGFSAEAGQFLRINNQA*RYNKPG
Trigger: CCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTAT...TCTTAAGAACTGCCCAGCCTCAGCTGAAAACCCGAATCTGAGAAGGAATTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAAGGCTTTCCGTGGGTTTaGCAACCACAGTGTCTAAGA +
Preference number: 5 (lower is better)
Translates to: LWNGNGTFSELRICKALKGFPWV*QPQCLR
Trigger: TCTTAGACACTGTGGTTGCAAAACCCACGGAAAGCC...TTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CTTAATTCCAGCTTCCCTTACATGACGCAATTCCTTCTCAGATTCGGGTTTTCATTTCCAAGCCCCGGGTaGTGGATAAGGTCTGGATTT +
Preference number: 5 (lower is better)
Translates to: LNSSFPYMTQFLLRFGFSFPSPG*WIRSGF
Trigger: AAATCCAGACCTTATCCACAACCCGGGGCTTGGAAA...TGAAAACCCGAATCTGAGAAGGAATTGCGTCATGTAAGGGAAGCTGGAATTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTCATGCCTTTCTCCTaGGCCCCCATGACCAAAGAA +
Preference number: 5 (lower is better)
Translates to: LWNGNGTFSELRICKALKFMPFS*APMTKE
Trigger: TTCTTTGGTCATGGGGGCCAAGGAGAAAGGCATGAA...TTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CAA 90 bp TCCCTCTGGAACGGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGTTTTTGTGTGTCTTCTaGTACTTCCCGACACGTAGT +
Preference number: 5 (lower is better)
Translates to: SLWNGNGTFSELRICKALFLCVF*YFPTRS
Trigger: ACTACGTGTCGGGAAGTACAAGAAGACACACAAAAA...CAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCCGTTCCAGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACAGCTGGGAAGACAAAGTGGGTTTaGGGAAAGATGAGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: GTFSELRICKALKLTTAGKTKWV*GKMRPA
Trigger: TGCAGGCCTCATCTTTCCCAAAACCCACTTTGTCTT...CCCAGCTGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp CACCCCTCCCTTTCAGTAATATCCAAGTATTCATCCTTCTGGCCAAAGAAACTGTTTTTGTGTGTCTTCTaGTACTTCCCGACACGTAGT +
Preference number: 5 (lower is better)
Translates to: HPSLSVISKYSSFWPKKLFLCVF*YFPTRS
Trigger: ACTACGTGTCGGGAAGTACAAGAAGACACACAAAAA...CAGTTTCTTTGGCCAGAAGGATGAATACTTGGATATTACTGAAAGGGAGGGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CAA 90 bp GGAAATGGAACTTTCTCTGAGCTTAGGATTTGTAAGGCACTGAAATTAACTACACGGAAGATGGGGTTGTaGCCAAAGGGGATAATGTCC +
Preference number: 5 (lower is better)
Translates to: GNGTFSELRICKALKLTTRKMGL*PKGIMS
Trigger: GGACATTATCCCCTTTGGCAACAACCCCATCTTCCG...TGTAGTTAATTTCAGTGCCTTACAAATCCTAAGCTCAGAGAAAGTTCCATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648728.1
ENST00000649769.1
CDS-3UTR CAA 90 bp ATCATCAGTTTTGCACTGAGCAAGGAAGCACATGGGTCTCCTATGAGAGCTAATATAAACAACCAAGCTTaGCGTTATAACAAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: IISFALSKEAHGSPMRANINNQA*RYNKPG
Trigger: CCCTGGCTTGTTATAACGCAAAGCTTGGTTGTTTAT...ATTAGCTCTCATAGGAGACCCATGTGCTTCCTTGCTCAGTGCAAAACTGATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371269.9
ENST00000535035.6
ENST00000647912.1
ENST00000649769.1
CDS-3UTR CAA 90 bp ACACAATTGGATAAGCTTGACACATGCATGCAACCAAGGACTCCAATCACTGCATTTGGAGGATTTCTCTaGTTTAACCCCGTTAACCTG +
Preference number: 5 (lower is better)
Translates to: TQLDKLDTCMQPRTPITAFGGFL*FNPVNL
Trigger: CAGGTTAACGGGGTTAAACAAGAGAAATCCTCCAAA...TGCAGTGATTGGAGTCCTTGGTTGCATGCATGTGTCAAGCTTATCCAATTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649769.1
CDS GCA 72 bp CGCACCTGCTTCTGGATGTCCCGCACGCGCTGCTCGTaGAGGCGCGGAGCGCTGCTGAGCTTGAACACCACC +
Preference number: 6 (lower is better)
Translates to: RTCFWMSRTRCS*RRGALLSLNTT
Trigger: GGTGGTGTTCAAGCTCAGCAGCGCTCCGCGCCTGCACGAGCAGCGCGTGCGGGACATCCAGAAGCAGGTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648494.1
ENST00000648728.1
ENST00000649769.1
CDS GCA 72 bp CCAGGGCGCCCCGTGCACATGAAGGTCTTGCTACCCTaGTCCTTCCATTCCCGCACCGCAGCTCCCGTCGCC +
Preference number: 6 (lower is better)
Translates to: PGRPVHMKVLLP*SFHSRTAAPVA
Trigger: GGCGACGGGAGCTGCGGTGCGGGAATGGAAGGAGCAGGGTAGCAAGACCTTCATGTGCACGGGGCGCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647585.1
ENST00000648712.1
CDS GCA 72 bp CATTCCCGCACCTGCTTCTGGATGTCCCGCACGCGCTaGTCGTGCAGGCGCGGAGCGCTGCTGAGCTTGAAC +
Preference number: 6 (lower is better)
Translates to: HSRTCFWMSRTR*SCRRGALLSLN
Trigger: GTTCAAGCTCAGCAGCGCTCCGCGCCTGCACGAGCAGCGCGTGCGGGACATCCAGAAGCAGGTGCGGGAATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647912.1
ENST00000648494.1
ENST00000648728.1
ENST00000649769.1
CDS GCA 72 bp CCAGGGCGCCCCGTGCACATGAAGGTCTTGCTACCCTaGTCCTTCCATTCCCGCACCTCGCGTCCCGCTATC +
Preference number: 6 (lower is better)
Translates to: PGRPVHMKVLLP*SFHSRTSRPAI
Trigger: GATAGCGGGACGCGAGGTGCGGGAATGGAAGGAGCAGGGTAGCAAGACCTTCATGTGCACGGGGCGCCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648641.1
CDS GCA 72 bp TCACGTGTCTGTCTCTCCAGGCGGGCTCCAGCTCAGTaGCTGGCGGCCTTGCAGATCTTGTCGTACACCTCG +
Preference number: 6 (lower is better)
Translates to: SRVCLSRRAPAQ*LAALQILSYTS
Trigger: CGAGGTGTACGACAAGATCTGCAAGGCCGCCAGGCACTGAGCTGGAGCCCGCCTGGAGAGACAGACACGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436604.2
CDS CCA 72 bp AGCCAATGGAGGTCAGCAGGGCAGTCACCTGGCCCATaGTCACCAAGGGCTCCACACGGACAATCTGTTTCT +
Preference number: 6 (lower is better)
Translates to: SQWRSAGQSPGP*SPRAPHGQSVS
Trigger: AGAAACAGATTGTCCGTGTGGAGCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCTGACCTCCATTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647585.1
ENST00000648182.1
ENST00000648641.1
ENST00000650362.1
CDS CCA 72 bp AGCCAATGGAGGTCAGCAGGGCAGTCACCTGGCCCATaGTCACCAAGGGCTCCACACGGACAATCTTTCAAC +
Preference number: 6 (lower is better)
Translates to: SQWRSAGQSPGP*SPRAPHGQSFN
Trigger: GTTGAAAGATTGTCCGTGTGGAGCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCTGACCTCCATTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648494.1
CDS CCA 72 bp AGCCAATGGAGGTCAGCAGGGCAGTCACCTGGCCCATaGTCACCAAGGGCTCCACACGGACAATCTGTAATC +
Preference number: 6 (lower is better)
Translates to: SQWRSAGQSPGP*SPRAPHGQSVI
Trigger: GATTACAGATTGTCCGTGTGGAGCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCTGACCTCCATTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648712.1
CDS CAA 90 bp TCCAGAATGTCCATCAGGTTGATCATGATGTTTTTGTGTGTCTTCTaGTACTTCCCGACACGTAGTGAGACAGTGAGCCAGCCAGGGCGC +
Preference number: 6 (lower is better)
Translates to: SRMSIRLIMMFLCVF*YFPTRSETVSQPGR
Trigger: GCGCCCTGGCTGGCTCACTGTCTCACTACGTGTCGGGAAGTACAAGAAGACACACAAAAACATCATGATCAACCTGATGGACATTCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647585.1
ENST00000647912.1
ENST00000648182.1
ENST00000648494.1
ENST00000648641.1
ENST00000648712.1
ENST00000648728.1
ENST00000649769.1
ENST00000650362.1
CDS CAA 72 bp TCCATCAGGTTGATCATGATGTTTTTGTGTGTCTTCTaGTACTTCCCGACACGTAGTGAGACAGTGAGCCAG +
Preference number: 6 (lower is better)
Translates to: SIRLIMMFLCVF*YFPTRSETVSQ
Trigger: CTGGCTCACTGTCTCACTACGTGTCGGGAAGTACAAGAAGACACACAAAAACATCATGATCAACCTGATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000371269.9
ENST00000436604.2
ENST00000535035.6
ENST00000647585.1
ENST00000647912.1
ENST00000648182.1
ENST00000648494.1
ENST00000648641.1
ENST00000648712.1
ENST00000648728.1
ENST00000649769.1
ENST00000650362.1
CDS CAA 72 bp CTCCAAATAAAGATGTTGAGTGAAAGAGGCTGTTTCTaGGTGTCCACTTCCAGAATGTCCATCAGGTTGATC +
Preference number: 6 (lower is better)
Translates to: LQIKMLSERGCF*VSTSRMSIRLI
Trigger: GATCAACCTGATGGACATTCTGGAAGTGGACACCAAGAAACAGCCTCTTTCACTCAACATCTTTATTTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648494.1
CDS CAA 90 bp CACACGGACAATCTTTCAACATGGATGAATCTCCAAATAAAGATGTaGAGTGAAAGAGGCTGTTTCTTGGTGTCCACTTCCAGAATGTCC +
Preference number: 6 (lower is better)
Translates to: HTDNLSTWMNLQIKM*SERGCFLVSTSRMS
Trigger: GGACATTCTGGAAGTGGACACCAAGAAACAGCCTCTTTCACTCAACATCTTTATTTGGAGATTCATCCATGTTGAAAGATTGTCCGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648494.1
CDS CAA 90 bp CAAAGCAGACATCAAAAGGGAAATCAAAGTATTCTGAACTGTTTCTaGGTGTCCACTTCCAGAATGTCCATCAGGTTGATCATGATGTTT +
Preference number: 6 (lower is better)
Translates to: QSRHQKGNQSILNCF*VSTSRMSIRLIMMF
Trigger: AAACATCATGATCAACCTGATGGACATTCTGGAAGTGGACACCAAGAAACAGTTCAGAATACTTTGATTTCCCTTTTGATGTCTGCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648728.1
ENST00000649769.1