RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DGKQ (Homo sapiens)

Ensembl gene IDs: ENSG00000145214

Ensembl transcript IDs: ENST00000273814.8, ENST00000502309.1, ENST00000509465.5, ENST00000510286.1, ENST00000515182.1

Found 395 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCTGCACCGCCATGCCCTGCTTTTGGTCCCTTCTGGGTGCTAAGTaGCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCA +
Preference number: 1 (lower is better)
Translates to: LCTAMPCFWSLLGAK*PTLRAEGQTLGPGP
Trigger: TGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCACTTAGCACCCAGAAGGGACCAAAAGCAGGGCATGGCGGTGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR CCA 90 bp ACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGCTCAGTaGGGAGAGGGATGGGTGCCCACCCCTGAGGAGAGGACCAGGCCC +
Preference number: 1 (lower is better)
Translates to: TWTACIQHCPAQGAQ*GEGWVPTPEERTRP
Trigger: GGGCCTGGTCCTCTCCTCAGGGGTGGGCACCCATCCCTCTCCCCACTGAGCCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR TCA 90 bp GACACTCGGGCCCGGCCCACACTCTGGTGCTGCCAGGGCAGCACCTaGGACCTCCTAGCCTCCACGTGGACAGAGGTTCTCCTCCCCAAG +
Preference number: 1 (lower is better)
Translates to: DTRARPTLWCCQGST*DLLASTWTEVLLPK
Trigger: CTTGGGGAGGAGAACCTCTGTCCACGTGGAGGCTAGGAGGTCTCAGGTGCTGCCCTGGCAGCACCAGAGTGTGGGCCGGGCCCGAGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR GCA 90 bp GTCACCAATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATaGTGTGGTCAGGGCTGTAGCCAGGTCCGACCACAGGGCCGGCCA +
Preference number: 1 (lower is better)
Translates to: VTNGMRAGPAPSLGR*CGQGCSQVRPQGRP
Trigger: TGGCCGGCCCTGTGGTCGGACCTGGCTACAGCCCTGACCACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATTGGTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR GCA 90 bp GAGGCAGCTTTGTCTTTGGCTGGGTGCACCCCAGCCTGGCCCAGATaGAGGACCCTCCACCAAGCTGTCTGGGGGCGTGGGAGCAGGAGG +
Preference number: 1 (lower is better)
Translates to: EAALSLAGCTPAWPR*RTLHQAVWGRGSRR
Trigger: CCTCCTGCTCCCACGCCCCCAGACAGCTTGGTGGAGGGTCCTGCATCTGGGCCAGGCTGGGGTGCACCCAGCCAAAGACAAAGCTGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR TCA 90 bp ACAGGGCCGGCCACTGTGTGGACGTGGAGCTGCCTCCAGACCACCTaGAAACAAGGCTGGCGGGAGCAGAGATGGCTCGAGCCCTTGGGC +
Preference number: 1 (lower is better)
Translates to: TGPATVWTWSCLQTT*KQGWREQRWLEPLG
Trigger: GCCCAAGGGCTCGAGCCATCTCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCAGCTCCACGTCCACACAGTGGCCGGCCCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR GCA 90 bp CCACACCCAGGAAAGCTCCGCAGGATTGGAGGCCCAGGCCAGCTGTaGCCCACAAGGGAAGGGGGAGATCCGCACCGTGGGACCGTTTCT +
Preference number: 1 (lower is better)
Translates to: PHPGKLRRIGGPGQL*PTREGGDPHRGTVS
Trigger: AGAAACGGTCCCACGGTGCGGATCTCCCCCTTCCCTTGTGGGGCACAGCTGGCCTGGGCCTCCAATCCTGCGGAGCTTTCCTGGGTGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR TCA 90 bp CTGCTCTTAAGGACTGGCCAGGGGGACGGCCCGAGGGGCACAAAGTaGGATCAGACCCACCTGGACGGCCTGCATCCAGCACTGTCCAGC +
Preference number: 1 (lower is better)
Translates to: LLLRTGQGDGPRGTK*DQTHLDGLHPALSS
Trigger: GCTGGACAGTGCTGGATGCAGGCCGTCCAGGTGGGTCTGATCTCACTTTGTGCCCCTCGGGCCGTCCCCCTGGCCAGTCCTTAAGAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR GCA 90 bp GTGCTAGCGTGGGGTCTGGGGCTGAAAGCCAGCTCCTCCTCCACGTaGATGGGCTGTTTACACCTCCCAAACTCCTCTGCACCGCCATGC +
Preference number: 1 (lower is better)
Translates to: VLAWGLGLKASSSST*MGCLHLPNSSAPPC
Trigger: GCATGGCGGTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGGCTTTCAGCCCCAGACCCCACGCTAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR CCA 90 bp CTGTTTACACCTCCCAAACTCCTCTGCACCGCCATGCCCTGCTTTTaGTCCCTTCTGGGTGCTAAGTGCCCCACCCTGAGGGCCGAGGGG +
Preference number: 1 (lower is better)
Translates to: LFTPPKLLCTAMPCF*SLLGAKCPTLRAEG
Trigger: CCCCTCGGCCCTCAGGGTGGGGCACTTAGCACCCAGAAGGGACCAAAAGCAGGGCATGGCGGTGCAGAGGAGTTTGGGAGGTGTAAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR CCA 90 bp GAACTGCACATCAACAGCGGGCAAGCAGCGTGGAAAGTGCTAGCGTaGGGTCTGGGGCTGAAAGCCAGCTCCTCCTCCACGTGCATGGGC +
Preference number: 1 (lower is better)
Translates to: ELHINSGQAAWKVLA*GLGLKASSSSTCMG
Trigger: GCCCATGCACGTGGAGGAGGAGCTGGCTTTCAGCCCCAGACCCCACGCTAGCACTTTCCACGCTGCTTGCCCGCTGTTGATGTGCAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR CCA 90 bp CACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTGGCTaGGTGCACCCCAGCCTGGCCCAGATGCAGGACCCTCCACCAAGC +
Preference number: 1 (lower is better)
Translates to: HHLNPWARGGSFVFG*VHPSLAQMQDPPPS
Trigger: GCTTGGTGGAGGGTCCTGCATCTGGGCCAGGCTGGGGTGCACCCAGCCAAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR CCA 90 bp AGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTaGCTGGGTGCACCCCAGCCTGGCCCAGATGCAGGACCCTCCACC +
Preference number: 1 (lower is better)
Translates to: SAPSESLGTWRQLCL*LGAPQPGPDAGPST
Trigger: GGTGGAGGGTCCTGCATCTGGGCCAGGCTGGGGTGCACCCAGCCAAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR GCA 90 bp CCAAGCAGAGGCACTAGGAAAGGGCCACCAGGTCCAGCTGGGCACTaGCTGCCCCTGGAGCTGTACCTGAGATCCAAGCTGCCATCTGTA +
Preference number: 1 (lower is better)
Translates to: PSRGTRKGPPGPAGH*LPLELYLRSKLPSV
Trigger: TACAGATGGCAGCTTGGATCTCAGGTACAGCTCCAGGGGCAGGCAGTGCCCAGCTGGACCTGGTGGCCCTTTCCTAGTGCCTCTGCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR GCA 90 bp CATGGGCTGTTTACACCTCCCAAACTCCTCTGCACCGCCATGCCCTaGTTTTGGTCCCTTCTGGGTGCTAAGTGCCCCACCCTGAGGGCC +
Preference number: 1 (lower is better)
Translates to: HGLFTPPKLLCTAMP*FWSLLGAKCPTLRA
Trigger: GGCCCTCAGGGTGGGGCACTTAGCACCCAGAAGGGACCAAAAGCAGGGCATGGCGGTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR CCA 90 bp TCACACAGGCACTGGGAACTGCACATCAACAGCGGGCAAGCAGCGTaGAAAGTGCTAGCGTGGGGTCTGGGGCTGAAAGCCAGCTCCTCC +
Preference number: 1 (lower is better)
Translates to: SHRHWELHINSGQAA*KVLAWGLGLKASSS
Trigger: GGAGGAGCTGGCTTTCAGCCCCAGACCCCACGCTAGCACTTTCCACGCTGCTTGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR GCA 90 bp CTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTaGACCGCCATGCCCTGCTTTTGGTCCCTTCTGGGTGCTAAGTGC +
Preference number: 1 (lower is better)
Translates to: LLLHVHGLFTPPKLL*TAMPCFWSLLGAKC
Trigger: GCACTTAGCACCCAGAAGGGACCAAAAGCAGGGCATGGCGGTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR TCA 90 bp GGCCACCAGGTCCAGCTGGGCACTGCCTGCCCCTGGAGCTGTACCTaGGATCCAAGCTGCCATCTGTATATAACAAGGCCAGAAAACAAG +
Preference number: 1 (lower is better)
Translates to: GHQVQLGTACPWSCT*DPSCHLYITRPENK
Trigger: CTTGTTTTCTGGCCTTGTTATATACAGATGGCAGCTTGGATCTCAGGTACAGCTCCAGGGGCAGGCAGTGCCCAGCTGGACCTGGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR GCA 90 bp GCTAAGTGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACCACGCTGCCCACACCTaGTGCCCAGGGCGGGGAGGT +
Preference number: 2 (lower is better)
Translates to: AKCPTLRAEGQTLGPGPHHAAHT*CPGRGG
Trigger: ACCTCCCCGCCCTGGGCAGCAGGTGTGGGCAGCGTG...GTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCACTTAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR CCA 90 bp GCTAAGTGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACGCAGCCTGTGTCTGCTaGGGCAGGGACACACCAGGG +
Preference number: 2 (lower is better)
Translates to: AKCPTLRAEGQTLGPGPHAACVC*GRDTPG
Trigger: CCCTGGTGTGTCCCTGCCCCAGCAGACACAGGCTGC...GTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCACTTAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR GCA 90 bp GGGCACGTGGAGGCAGCTTTGTCTTTGGCTGGGTGCACCCCAGCCTGGCCCAGACACGCTGCCCACACCTaGTGCCCAGGGCGGGGAGGT +
Preference number: 2 (lower is better)
Translates to: GHVEAALSLAGCTPAWPRHAAHT*CPGRGG
Trigger: ACCTCCCCGCCCTGGGCAGCAGGTGTGGGCAGCGTG...TCTGGGCCAGGCTGGGGTGCACCCAGCCAAAGACAAAGCTGCCTCCACGTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR TCA 90 bp TGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACTCTGGTCCCTGGAGCTGTACCTaGGATCCAAGCTGCCATCTG +
Preference number: 2 (lower is better)
Translates to: CPTLRAEGQTLGPGPHSGPWSCT*DPSCHL
Trigger: CAGATGGCAGCTTGGATCTCAGGTACAGCTCCAGGG...ACCAGAGTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR CCA 90 bp GCCATGCCCTGCTTTTGGTCCCTTCTGGGTGCTAAGTGCCCCACCCTGAGGGCCGCCCGGCCCACACTCTaGTGCTGCCAGGGCAGCACC +
Preference number: 2 (lower is better)
Translates to: AMPCFWSLLGAKCPTLRAARPTL*CCQGST
Trigger: GGTGCTGCCCTGGCAGCACCAGAGTGTGGGCCGGGC...GGCCCTCAGGGTGGGGCACTTAGCACCCAGAAGGGACCAAAAGCAGGGCATGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR CCA 90 bp GGGCACGTGGAGGCAGCTTTGTCTTTGGCTGGGTGCACCCCAGCCTGGCCCAGATGGCGGGAGCAGAGATaGCTCGAGCCCTTGGGCTGC +
Preference number: 2 (lower is better)
Translates to: GHVEAALSLAGCTPAWPRWREQR*LEPLGC
Trigger: GCAGCCCAAGGGCTCGAGCCATCTCTGCTCCCGCCA...TCTGGGCCAGGCTGGGGTGCACCCAGCCAAAGACAAAGCTGCCTCCACGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR TCA 90 bp GCGTGGAAAGTGCTAGCGTGGGGTCTGGGGCTGAAAGCCAGCTCCTCCTCCACGTGCCAGGGCAGCACCTaGGACCTCCTAGCCTCCACG +
Preference number: 2 (lower is better)
Translates to: AWKVLAWGLGLKASSSSTCQGST*DLLAST
Trigger: CGTGGAGGCTAGGAGGTCTCAGGTGCTGCCCTGGCA...CGTGGAGGAGGAGCTGGCTTTCAGCCCCAGACCCCACGCTAGCACTTTCCACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR CCA 90 bp CTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCGGGCCGGCCACTGTGTaGACGTGGAGCTGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: LPGPVHHLNPWARGGSFVGPATV*TWSCLQ
Trigger: CTGGAGGCAGCTCCACGTCCACACAGTGGCCGGCCC...GACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR CCA 90 bp GCGTGGAAAGTGCTAGCGTGGGGTCTGGGGCTGAAAGCCAGCTCCTCCTCCACGGCTGCTCTTAAGGACTaGCCAGGGGGACGGCCCGAG +
Preference number: 2 (lower is better)
Translates to: AWKVLAWGLGLKASSSSTAALKD*PGGRPE
Trigger: CTCGGGCCGTCCCCCTGGCCAGTCCTTAAGAGCAGC...CGTGGAGGAGGAGCTGGCTTTCAGCCCCAGACCCCACGCTAGCACTTTCCACGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR CCA 90 bp GGGCACGTGGAGGCAGCTTTGTCTTTGGCTGGGTGCACCCCAGCCTGGCCCAGAAGCGGGCAAGCAGCGTaGAAAGTGCTAGCGTGGGGT +
Preference number: 2 (lower is better)
Translates to: GHVEAALSLAGCTPAWPRSGQAA*KVLAWG
Trigger: ACCCCACGCTAGCACTTTCCACGCTGCTTGCCCGCT...TCTGGGCCAGGCTGGGGTGCACCCAGCCAAAGACAAAGCTGCCTCCACGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR TCA 90 bp CACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGCTCAGTGGGGAGATGCCTCCAGACCACCTaGAAACAAGGCTGGCGGGAG +
Preference number: 2 (lower is better)
Translates to: HLDGLHPALSSSRGSVGRCLQTT*KQGWRE
Trigger: CTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCA...TCTCCCCACTGAGCCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR GCA 90 bp ACTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTCCCACCTGGACGGCCTaGATCCAGCACTGTCCAGCT +
Preference number: 2 (lower is better)
Translates to: TPPGASAPSESLGTWRQLPTWTA*IQHCPA
Trigger: AGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTGGG...AAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR GCA 90 bp CTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTCTGGCAGCCTGTGTCTaGTGGGGCAGGGACACACCA +
Preference number: 2 (lower is better)
Translates to: LLPGPVHHLNPWARGGSFLAACV*WGRDTP
Trigger: TGGTGTGTCCCTGCCCCAGCAGACACAGGCTGCCAG...AAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR GCA 90 bp CTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTGGGAGCAGGAGGGCTaGAGGAGCTGGGTCTCCACA +
Preference number: 2 (lower is better)
Translates to: LPGPVHHLNPWARGGSFVWEQEG*RSWVST
Trigger: TGTGGAGACCCAGCTCCTGCAGCCCTCCTGCTCCCA...GACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR CCA 90 bp CTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCGCCACTGTGTGGACGTaGAGCTGCCTCCAGACCACC +
Preference number: 2 (lower is better)
Translates to: LPGPVHHLNPWARGGSFVATVWT*SCLQTT
Trigger: GGTGGTCTGGAGGCAGCTCCACGTCCACACAGTGGC...GACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR CCA 90 bp CTGAGCAGATGTCGGCTCACACAGGCACTGGGAACTGCACATCAACAGCGGGCAGCCACCAGGTCCAGCTaGGCACTGCCTGCCCCTGGA +
Preference number: 2 (lower is better)
Translates to: LSRCRLTQALGTAHQQRAATRSS*ALPAPG
Trigger: TCCAGGGGCAGGCAGTGCCCAGCTGGACCTGGTGGC...TGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCCGACATCTGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR TCA 90 bp CCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTTGCCAGGGCAGCACCTaGGACCTCCTAGCCTCCACG +
Preference number: 2 (lower is better)
Translates to: PGPVHHLNPWARGGSFVFCQGST*DLLAST
Trigger: CGTGGAGGCTAGGAGGTCTCAGGTGCTGCCCTGGCA...AAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR TCA 90 bp CTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTGGGTCTCCACACGCTaGCGAGGGATAGGACTGAGC +
Preference number: 2 (lower is better)
Translates to: LPGPVHHLNPWARGGSFVWVSTR*RGIGLS
Trigger: GCTCAGTCCTATCCCTCGTCAGCGTGTGGAGACCCA...GACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR CCA 90 bp CCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTTGGCGGGAGCAGAGATaGCTCGAGCCCTTGGGCTGC +
Preference number: 2 (lower is better)
Translates to: PGPVHHLNPWARGGSFVFWREQR*LEPLGC
Trigger: GCAGCCCAAGGGCTCGAGCCATCTCTGCTCCCGCCA...AAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR CCA 90 bp GCCATGCCCTGCTTTTGGTCCCTTCTGGGTGCTAAGTGCCCCACCCTGAGGGCCAACATGTGTCACCAATaGGATGAGGGCGGGTCCCGC +
Preference number: 2 (lower is better)
Translates to: AMPCFWSLLGAKCPTLRANMCHQ*DEGGSR
Trigger: GCGGGACCCGCCCTCATCCCATTGGTGACACATGTT...GGCCCTCAGGGTGGGGCACTTAGCACCCAGAAGGGACCAAAAGCAGGGCATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR CCA 90 bp CTGAGCAGATGTCGGCTCACACAGGCACTGGGAACTGCACATCAACAGCGGGCAGCTGCTCTTAAGGACTaGCCAGGGGGACGGCCCGAG +
Preference number: 2 (lower is better)
Translates to: LSRCRLTQALGTAHQQRAAALKD*PGGRPE
Trigger: CTCGGGCCGTCCCCCTGGCCAGTCCTTAAGAGCAGC...TGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCCGACATCTGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR CCA 90 bp CTGAGCAGATGTCGGCTCACACAGGCACTGGGAACTGCACATCAACAGCGGGCAGCAGCCTGTGTCTGCTaGGGCAGGGACACACCAGGG +
Preference number: 2 (lower is better)
Translates to: LSRCRLTQALGTAHQQRAAACVC*GRDTPG
Trigger: CCCTGGTGTGTCCCTGCCCCAGCAGACACAGGCTGC...TGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCCGACATCTGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR GCA 90 bp GTGAGATCAGACCCACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGCCGTCACTGGGAAGATaGTGTGGTCAGGGCTGTAGC +
Preference number: 2 (lower is better)
Translates to: VRSDPPGRPASSTVQLKGPSLGR*CGQGCS
Trigger: GCTACAGCCCTGACCACAGCATCTTCCCAGTGACGG...CCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTGGGTCTGATCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR GCA 90 bp ACTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTCCGTCACTGGGAAGATaGTGTGGTCAGGGCTGTAGC +
Preference number: 2 (lower is better)
Translates to: TPPGASAPSESLGTWRQLPSLGR*CGQGCS
Trigger: GCTACAGCCCTGACCACAGCATCTTCCCAGTGACGG...AAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR GCA 90 bp CCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTCTGGCAGCCTGTGTCTaGTGGGGCAGGGACACACCA +
Preference number: 2 (lower is better)
Translates to: PGPVHHLNPWARGGSFVFLAACV*WGRDTP
Trigger: TGGTGTGTCCCTGCCCCAGCAGACACAGGCTGCCAG...AAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR GCA 90 bp CCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTGCACCTTCTGGGTGCTAAGTaGCCCACCCTGAGGGCCGAG +
Preference number: 2 (lower is better)
Translates to: PAPPPRAWAVYTSQTPLHLLGAK*PTLRAE
Trigger: CTCGGCCCTCAGGGTGGGGCACTTAGCACCCAGAAG...GTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR GCA 90 bp ACTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGCACCGCCATGCCCTaGTTTTGGTCCCTTCTGGGT +
Preference number: 2 (lower is better)
Translates to: TPPGASAPSESLGTWRQLCTAMP*FWSLLG
Trigger: ACCCAGAAGGGACCAAAAGCAGGGCATGGCGGTGCA...AAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR CCA 90 bp CTGAGCAGATGTCGGCTCACACAGGCACTGGGAACTGCACATCAACAGCGGGCAGCCACTGTGTGGACGTaGAGCTGCCTCCAGACCACC +
Preference number: 2 (lower is better)
Translates to: LSRCRLTQALGTAHQQRAATVWT*SCLQTT
Trigger: GGTGGTCTGGAGGCAGCTCCACGTCCACACAGTGGC...TGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCCGACATCTGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR CCA 90 bp CTGCAGGAGCTGGGTCTCCACACGCTGACGAGGGATAGGACTGAGCAGATGTCGGAGATCAGACCCACCTaGACGGCCTGCATCCAGCAC +
Preference number: 2 (lower is better)
Translates to: LQELGLHTLTRDRTEQMSEIRPT*TACIQH
Trigger: GTGCTGGATGCAGGCCGTCCAGGTGGGTCTGATCTC...CGACATCTGCTCAGTCCTATCCCTCGTCAGCGTGTGGAGACCCAGCTCCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR CCA 90 bp ACTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTGCTTTTGGTCCCTTCTaGGTGCTAAGTGCCCCACCC +
Preference number: 2 (lower is better)
Translates to: TPPGASAPSESLGTWRQLAFGPF*VLSAPP
Trigger: GGGTGGGGCACTTAGCACCCAGAAGGGACCAAAAGC...AAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR CCA 90 bp CTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGCTTTTGGTCCCTTCTaGGTGCTAAGTGCCCCACCC +
Preference number: 2 (lower is better)
Translates to: LLPGPVHHLNPWARGGSFAFGPF*VLSAPP
Trigger: GGGTGGGGCACTTAGCACCCAGAAGGGACCAAAAGC...AAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR TCA 90 bp CTGAGCAGATGTCGGCTCACACAGGCACTGGGAACTGCACATCAACAGCGGGCATGCCTCCAGACCACCTaGAAACAAGGCTGGCGGGAG +
Preference number: 2 (lower is better)
Translates to: LSRCRLTQALGTAHQQRACLQTT*KQGWRE
Trigger: CTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCA...TGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCCGACATCTGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR TCA 90 bp ACTAGGAAAGGGCCACCAGGTCCAGCTGGGCACTGCCTGCCCCTGGAGCTGTACACCTTCTCCCTTCCCTaGACACAAGGAAGTCACCAG +
Preference number: 2 (lower is better)
Translates to: TRKGPPGPAGHCLPLELYTFSLP*TQGSHQ
Trigger: CTGGTGACTTCCTTGTGTTCAGGGAAGGGAGAAGGT...GTACAGCTCCAGGGGCAGGCAGTGCCCAGCTGGACCTGGTGGCCCTTTCCTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR CCA 90 bp CCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTCTCCTAGCCTCCACGTaGACAGAGGTTCTCCTCCCC +
Preference number: 2 (lower is better)
Translates to: PGPVHHLNPWARGGSFVFLLAST*TEVLLP
Trigger: GGGGAGGAGAACCTCTGTCCACGTGGAGGCTAGGAG...AAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR CCA 90 bp ACTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTGGCTCACACAGGCACTaGGAACTGCACATCAACAGC +
Preference number: 2 (lower is better)
Translates to: TPPGASAPSESLGTWRQLGSHRH*ELHINS
Trigger: GCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCC...AAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR GCA 90 bp GGGGCTGAAAGCCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAATCCTCTGCACCGCCATaGCCTGCTTTTGGTCCCTTC +
Preference number: 2 (lower is better)
Translates to: GAESQLLLHVHGLFTPPKSSAPP*PAFGPF
Trigger: GAAGGGACCAAAAGCAGGGCATGGCGGTGCAGAGGA...TTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGGCTTTCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR CCA 90 bp CCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTGCACAACATGTGTCACCAATaGGATGAGGGCGGGTCCCGC +
Preference number: 2 (lower is better)
Translates to: PAPPPRAWAVYTSQTPLHNMCHQ*DEGGSR
Trigger: GCGGGACCCGCCCTCATCCCATTGGTGACACATGTT...GTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR-3UTR TCA 90 bp CTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTGCACCGCCACCTTCTCCCTTCCCTaGACACAAGGAAGTCACCAG +
Preference number: 2 (lower is better)
Translates to: LLLHVHGLFTPPKLLCTATFSLP*TQGSHQ
Trigger: CTGGTGACTTCCTTGTGTTCAGGGAAGGGAGAAGGT...GGCGGTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR TCA 72 bp AGGACTGGCCAGGGGGACGGCCCGAGGGGCACAAAGTaGGATCAGACCCACCTGGACGGCCTGCATCCAGCA +
Preference number: 3 (lower is better)
Translates to: RTGQGDGPRGTK*DQTHLDGLHPA
Trigger: TGCTGGATGCAGGCCGTCCAGGTGGGTCTGATCTCACTTTGTGCCCCTCGGGCCGTCCCCCTGGCCAGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR GCA 72 bp GGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATaGTGTGGTCAGGGCTGTAGCCAGGTCCGACCACAG +
Preference number: 3 (lower is better)
Translates to: GMRAGPAPSLGR*CGQGCSQVRPQ
Trigger: CTGTGGTCGGACCTGGCTACAGCCCTGACCACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR GCA 72 bp TTGTCTTTGGCTGGGTGCACCCCAGCCTGGCCCAGATaGAGGACCCTCCACCAAGCTGTCTGGGGGCGTGGG +
Preference number: 3 (lower is better)
Translates to: LSLAGCTPAWPR*RTLHQAVWGRG
Trigger: CCCACGCCCCCAGACAGCTTGGTGGAGGGTCCTGCATCTGGGCCAGGCTGGGGTGCACCCAGCCAAAGACAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR CCA 72 bp CAGGGACACACCAGGGAGCCTGCTGCTCTTAAGGACTaGCCAGGGGGACGGCCCGAGGGGCACAAAGTGAGA +
Preference number: 3 (lower is better)
Translates to: QGHTREPAALKD*PGGRPEGHKVR
Trigger: TCTCACTTTGTGCCCCTCGGGCCGTCCCCCTGGCCAGTCCTTAAGAGCAGCAGGCTCCCTGGTGTGTCCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR GCA 72 bp GGCACTAGGAAAGGGCCACCAGGTCCAGCTGGGCACTaGCTGCCCCTGGAGCTGTACCTGAGATCCAAGCTG +
Preference number: 3 (lower is better)
Translates to: GTRKGPPGPAGH*LPLELYLRSKL
Trigger: CAGCTTGGATCTCAGGTACAGCTCCAGGGGCAGGCAGTGCCCAGCTGGACCTGGTGGCCCTTTCCTAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR CCA 72 bp ACGGCCCGAGGGGCACAAAGTGAGATCAGACCCACCTaGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGG +
Preference number: 3 (lower is better)
Translates to: TARGAQSEIRPT*TACIQHCPAQG
Trigger: CCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTGGGTCTGATCTCACTTTGTGCCCCTCGGGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR TCA 72 bp GCCACTGTGTGGACGTGGAGCTGCCTCCAGACCACCTaGAAACAAGGCTGGCGGGAGCAGAGATGGCTCGAG +
Preference number: 3 (lower is better)
Translates to: ATVWTWSCLQTT*KQGWREQRWLE
Trigger: CTCGAGCCATCTCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCAGCTCCACGTCCACACAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR CCA 72 bp CCTCCCAAACTCCTCTGCACCGCCATGCCCTGCTTTTaGTCCCTTCTGGGTGCTAAGTGCCCCACCCTGAGG +
Preference number: 3 (lower is better)
Translates to: PPKLLCTAMPCF*SLLGAKCPTLR
Trigger: CCTCAGGGTGGGGCACTTAGCACCCAGAAGGGACCAAAAGCAGGGCATGGCGGTGCAGAGGAGTTTGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR CCA 72 bp AATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTGGCTaGGTGCACCCCAGCCTGGCCCAGATGCAGGACCCT +
Preference number: 3 (lower is better)
Translates to: NPWARGGSFVFG*VHPSLAQMQDP
Trigger: AGGGTCCTGCATCTGGGCCAGGCTGGGGTGCACCCAGCCAAAGACAAAGCTGCCTCCACGTGCCCAAGGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR CCA 72 bp CACTGGGAACTGCACATCAACAGCGGGCAAGCAGCGTaGAAAGTGCTAGCGTGGGGTCTGGGGCTGAAAGCC +
Preference number: 3 (lower is better)
Translates to: HWELHINSGQAA*KVLAWGLGLKA
Trigger: GGCTTTCAGCCCCAGACCCCACGCTAGCACTTTCCACGCTGCTTGCCCGCTGTTGATGTGCAGTTCCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR GCA 72 bp TGGGGTCTGGGGCTGAAAGCCAGCTCCTCCTCCACGTaGATGGGCTGTTTACACCTCCCAAACTCCTCTGCA +
Preference number: 3 (lower is better)
Translates to: WGLGLKASSSST*MGCLHLPNSSA
Trigger: TGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGGCTTTCAGCCCCAGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR GCA 72 bp TTTACACCTCCCAAACTCCTCTGCACCGCCATGCCCTaGTTTTGGTCCCTTCTGGGTGCTAAGTGCCCCACC +
Preference number: 3 (lower is better)
Translates to: FTPPKLLCTAMP*FWSLLGAKCPT
Trigger: GGTGGGGCACTTAGCACCCAGAAGGGACCAAAAGCAGGGCATGGCGGTGCAGAGGAGTTTGGGAGGTGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR GCA 72 bp GGCTGTTTACACCTCCCAAACTCCTCTGCACCGCCATaGCCTGCTTTTGGTCCCTTCTGGGTGCTAAGTGCC +
Preference number: 3 (lower is better)
Translates to: GCLHLPNSSAPP*PAFGPFWVLSA
Trigger: GGCACTTAGCACCCAGAAGGGACCAAAAGCAGGGCATGGCGGTGCAGAGGAGTTTGGGAGGTGTAAACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR GCA 72 bp CACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTaGACCGCCATGCCCTGCTTTTGGTCCCTTCTGGGT +
Preference number: 3 (lower is better)
Translates to: HVHGLFTPPKLL*TAMPCFWSLLG
Trigger: ACCCAGAAGGGACCAAAAGCAGGGCATGGCGGTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR GCA 72 bp ACTGAGCAGATGTCGGCTCACACAGGCACTGGGAACTaGACATCAACAGCGGGCAAGCAGCGTGGAAAGTGC +
Preference number: 3 (lower is better)
Translates to: TEQMSAHTGTGN*TSTAGKQRGKC
Trigger: GCACTTTCCACGCTGCTTGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCCGACATCTGCTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR TCA 72 bp GTCCAGCTGGGCACTGCCTGCCCCTGGAGCTGTACCTaGGATCCAAGCTGCCATCTGTATATAACAAGGCCA +
Preference number: 3 (lower is better)
Translates to: VQLGTACPWSCT*DPSCHLYITRP
Trigger: TGGCCTTGTTATATACAGATGGCAGCTTGGATCTCAGGTACAGCTCCAGGGGCAGGCAGTGCCCAGCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR TCA 72 bp TTTTGGTCAGACTCCTCCCGGGGCCAGTGCACCATCTaGATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTG +
Preference number: 3 (lower is better)
Translates to: FWSDSSRGQCTI*ILGHVEAALSL
Trigger: CAAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAGTCTGACCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp TGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACTCTGGTGGGTCCTCGGGGATGTaGTGGGCCCGCAGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: CPTLRAEGQTLGPGPHSGGSSGM*WARSAA
Trigger: GGCCGCACTGCGGGCCCACCACATCCCCGAGGACCC...ACCAGAGTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GCTAAGTGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACTCGGGACTCTCGGCCTaGCGGCCGAGCAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: AKCPTLRAEGQTLGPGPHSGLSA*RPSSGR
Trigger: CCTGCCGCTGCTCGGCCGCCAGGCCGAGAGTCCCGA...GTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCACTTAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GCTAAGTGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACGAGCGCAGCCCACCCTaGACCTGGCCCATGTGCACG +
Preference number: 4 (lower is better)
Translates to: AKCPTLRAEGQTLGPGPHERSPP*TWPMCT
Trigger: CGTGCACATGGGCCAGGTCCAGGGTGGGCTGCGCTC...GTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCACTTAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp TGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACTCTGGTGCAGGTCTCGGCCCTTaGGGCCTCCACTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: CPTLRAEGQTLGPGPHSGAGLGP*GLHSWG
Trigger: ACCCCAAGAGTGGAGGCCTCAAGGGCCGAGACCTGC...ACCAGAGTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp TGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACTCTGGTTGGCGGGAGCAGAGATaGCTCGAGCCCTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: CPTLRAEGQTLGPGPHSGWREQR*LEPLGC
Trigger: GCAGCCCAAGGGCTCGAGCCATCTCTGCTCCCGCCA...ACCAGAGTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GCTAAGTGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACTGGGACCGTTTCTCGTaGGGGAGTCGGGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: AKCPTLRAEGQTLGPGPHWDRFS*GSRGFP
Trigger: GGGGAAGCCCCGACTCCCCCACGAGAAACGGTCCCA...GTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCACTTAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp TGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACTCTGGTAGGCCACGCCCACCTTaGGCCAGCCAGGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: CPTLRAEGQTLGPGPHSGRPRPP*ASQGRS
Trigger: AGATCTACCCTGGCTGGCTCAAGGTGGGCGTGGCCT...ACCAGAGTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp GGGCACGTGGAGGCAGCTTTGTCTTTGGCTGGGTGCACCCCAGCCTGGCCCAGAGGAGCACCAGGGCAGTaGGCAGCCGGCCCCGCACAG +
Preference number: 4 (lower is better)
Translates to: GHVEAALSLAGCTPAWPRGAPGQ*AAGPAQ
Trigger: CTGTGCGGGGCCGGCTGCTCACTGCCCTGGTGCTCC...TCTGGGCCAGGCTGGGGTGCACCCAGCCAAAGACAAAGCTGCCTCCACGTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp TGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACTCTGGTCCAGCCTGGCCCAGATaGAGGACCCTCCACCAAGCT +
Preference number: 4 (lower is better)
Translates to: CPTLRAEGQTLGPGPHSGPAWPR*RTLHQA
Trigger: AGCTTGGTGGAGGGTCCTGCATCTGGGCCAGGCTGG...ACCAGAGTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GGGCACGTGGAGGCAGCTTTGTCTTTGGCTGGGTGCACCCCAGCCTGGCCCAGAGGGTCCTCGGGGATGTaGTGGGCCCGCAGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: GHVEAALSLAGCTPAWPRGSSGM*WARSAA
Trigger: GGCCGCACTGCGGGCCCACCACATCCCCGAGGACCC...TCTGGGCCAGGCTGGGGTGCACCCAGCCAAAGACAAAGCTGCCTCCACGTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp ACTAGGAAAGGGCCACCAGGTCCAGCTGGGCACTGCCTGCCCCTGGAGCTGTACGGAGCACCAGGGCAGTaGGCAGCCGGCCCCGCACAG +
Preference number: 4 (lower is better)
Translates to: TRKGPPGPAGHCLPLELYGAPGQ*AAGPAQ
Trigger: CTGTGCGGGGCCGGCTGCTCACTGCCCTGGTGCTCC...GTACAGCTCCAGGGGCAGGCAGTGCCCAGCTGGACCTGGTGGCCCTTTCCTAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GCTAAGTGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACACCTGGGAGAACAGGTaGAGCCCGGGAAGAGGACCT +
Preference number: 4 (lower is better)
Translates to: AKCPTLRAEGQTLGPGPHTWENR*SPGRGP
Trigger: AGGTCCTCTTCCCGGGCTCCACCTGTTCTCCCAGGT...GTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCACTTAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GCTAAGTGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACGTGGCTTCTCAAACCTaGTGTCGCTGTCGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: AKCPTLRAEGQTLGPGPHVASQT*CRCRSP
Trigger: GGGGCTCCGACAGCGACACCAGGTTTGAGAAGCCAC...GTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCACTTAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GCTAAGTGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACGAGATCAGACCCACCTaGACGGCCTGCATCCAGCAC +
Preference number: 4 (lower is better)
Translates to: AKCPTLRAEGQTLGPGPHEIRPT*TACIQH
Trigger: GTGCTGGATGCAGGCCGTCCAGGTGGGTCTGATCTC...GTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCACTTAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp TGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACTCTGGTCAGTCTGGGTGGAGGTaGAGCTCACACACTTCGCAG +
Preference number: 4 (lower is better)
Translates to: CPTLRAEGQTLGPGPHSGQSGWR*SSHTSQ
Trigger: CTGCGAAGTGTGTGAGCTGCACCTCCACCCAGACTG...ACCAGAGTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp GCTAAGTGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACACAAACAGGGAGACGTaGGGGGCTACATCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: AKCPTLRAEGQTLGPGPHTNRET*GATSLL
Trigger: GAGCAGGGATGTAGCCCCGCACGTCTCCCTGTTTGT...GTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCACTTAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp GCGTGGAAAGTGCTAGCGTGGGGTCTGGGGCTGAAAGCCAGCTCCTCCTCCACGGGCTCCCCGTCCACCTaGACCGGGGTGGCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: AWKVLAWGLGLKASSSSTGSPST*TGVALR
Trigger: CCTCAAGGCCACCCCGGTGCAGGTGGACGGGGAGCC...CGTGGAGGAGGAGCTGGCTTTCAGCCCCAGACCCCACGCTAGCACTTTCCACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp TGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACTCTGGTTCCTCTGCACCGCCATaGCCTGCTTTTGGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: CPTLRAEGQTLGPGPHSGSSAPP*PAFGPF
Trigger: GAAGGGACCAAAAGCAGGGCATGGCGGTGCAGAGGA...ACCAGAGTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GGGCACGTGGAGGCAGCTTTGTCTTTGGCTGGGTGCACCCCAGCCTGGCCCAGACAGAGGGAGTGCGCCTaGACCCCGCACCACTCGCAG +
Preference number: 4 (lower is better)
Translates to: GHVEAALSLAGCTPAWPRQRECA*TPHHSQ
Trigger: CTGCGAGTGGTGCGGGGTCCAGGCGCACTCCCTCTG...TCTGGGCCAGGCTGGGGTGCACCCAGCCAAAGACAAAGCTGCCTCCACGTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp ACTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTCCCGGGCATCCCTGGTaGTCCCGGCCCTCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: TPPGASAPSESLGTWRQLPGHPW*SRPSSA
Trigger: AGCCGAGGAGGGCCGGGACCACCAGGGATGCCCGGG...AAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp GGGCACGTGGAGGCAGCTTTGTCTTTGGCTGGGTGCACCCCAGCCTGGCCCAGAAGCTCTGCGTCTTGCTaGAGCCGCCGGGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: GHVEAALSLAGCTPAWPRSSASC*SRRAEG
Trigger: GCCTTCTGCCCGGCGGCTTCAGCAAGACGCAGAGCT...TCTGGGCCAGGCTGGGGTGCACCCAGCCAAAGACAAAGCTGCCTCCACGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp AATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTGGTCAGGGCCCAGGCGGGACACCGTaGCGAGGCGGAACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: NGMRAGPAPSLGRCCGQGPGGTP*RGGTGF
Trigger: GAAGCCAGTTCCGCCTCGTCACGGTGTCCCGCCTGG...GCCCTGACCACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp ACTAGGAAAGGGCCACCAGGTCCAGCTGGGCACTGCCTGCCCCTGGAGCTGTACTGGTCCAGCGGTCCATaGGCACGGCGTCGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: TRKGPPGPAGHCLPLELYWSSGP*ARRRPR
Trigger: ACGAGGCCGACGCCGTGCTCATGGACCGCTGGACCA...GTACAGCTCCAGGGGCAGGCAGTGCCCAGCTGGACCTGGTGGCCCTTTCCTAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp GCTAAGTGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACTGTGCAGCCTGCTTGTaGACTTGCCAGGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: AKCPTLRAEGQTLGPGPHCAACL*TCQAPL
Trigger: AAGAGGAGCCTGGCAAGTTCACAAGCAGGCTGCACA...GTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCACTTAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp GCCATGCCCTGCTTTTGGTCCCTTCTGGGTGCTAAGTGCCCCACCCTGAGGGCCGCAGTGGAGCGCCGGTaGCTCCAGGACCTTGCGGCA +
Preference number: 4 (lower is better)
Translates to: AMPCFWSLLGAKCPTLRAAVERR*LQDLAA
Trigger: TGCCGCAAGGTCCTGGAGGCACCGGCGCTCCACTGC...GGCCCTCAGGGTGGGGCACTTAGCACCCAGAAGGGACCAAAAGCAGGGCATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp ACTAGGAAAGGGCCACCAGGTCCAGCTGGGCACTGCCTGCCCCTGGAGCTGTACCGGCACAGCTCCAGGTaGCCAGGGTCCTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: TRKGPPGPAGHCLPLELYRHSSR*PGSSGM
Trigger: CATCCCCGAGGACCCTGGCCACCTGGAGCTGTGCCG...GTACAGCTCCAGGGGCAGGCAGTGCCCAGCTGGACCTGGTGGCCCTTTCCTAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp ACTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTGATGACCCAGGCCTCTaGCGTGGCCTCGCCGGACCC +
Preference number: 4 (lower is better)
Translates to: TPPGASAPSESLGTWRQLDDPGL*RGLAGP
Trigger: GGGTCCGGCGAGGCCACGCCAGAGGCCTGGGTCATC...AAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GCCATGCCCTGCTTTTGGTCCCTTCTGGGTGCTAAGTGCCCCACCCTGAGGGCCTGCCCAGGGGCAGGATaGCCACAGAAGGCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: AMPCFWSLLGAKCPTLRACPGAG*PQKAPG
Trigger: GCCCGGAGCCTTCTGTGGCCATCCTGCCCCTGGGCA...GGCCCTCAGGGTGGGGCACTTAGCACCCAGAAGGGACCAAAAGCAGGGCATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp TGTGGACGTGGAGCTGCCTCCAGACCACCTGAAAACAAGGCTGGCGGGAGCAGACCCGGGCATCCCTGGTaGTCCCGGCCCTCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: CGRGAASRPPENKAGGSRPGHPW*SRPSSA
Trigger: AGCCGAGGAGGGCCGGGACCACCAGGGATGCCCGGG...TCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCAGCTCCACGTCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GCGTGGAAAGTGCTAGCGTGGGGTCTGGGGCTGAAAGCCAGCTCCTCCTCCACGGCCACCAGGTCCAGCTaGGCACTGCCTGCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: AWKVLAWGLGLKASSSSTATRSS*ALPAPG
Trigger: TCCAGGGGCAGGCAGTGCCCAGCTGGACCTGGTGGC...CGTGGAGGAGGAGCTGGCTTTCAGCCCCAGACCCCACGCTAGCACTTTCCACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGCCCGGCCCACACTCTaGTGCTGCCAGGGCAGCACC +
Preference number: 4 (lower is better)
Translates to: LLPGPVHHLNPWARGGSFARPTL*CCQGST
Trigger: GGTGCTGCCCTGGCAGCACCAGAGTGTGGGCCGGGC...AAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp TGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACTCTGGTCCTCCTCCACGTGCATaGGCTGTTTACACCTCCCAA +
Preference number: 4 (lower is better)
Translates to: CPTLRAEGQTLGPGPHSGPPPRA*AVYTSQ
Trigger: TTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGG...ACCAGAGTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp AATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTGGTCAGGGCAGCTGTCTGGGGGCGTaGGAGCAGGAGGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NGMRAGPAPSLGRCCGQGSCLGA*EQEGCR
Trigger: CCTGCAGCCCTCCTGCTCCCACGCCCCCAGACAGCT...GCCCTGACCACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp CTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTCGGCCAGCCCCCAGATaGAGTCGGAGCAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LLPGPVHHLNPWARGGSFRPAPR*SRSRGG
Trigger: GCCACCTCTGCTCCGACTTCATCTGGGGGCTGGCCG...AAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp CACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGCTCAGTGGGGAGAAGCTCTGCGTCTTGCTaGAGCCGCCGGGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: HLDGLHPALSSSRGSVGRSSASC*SRRAEG
Trigger: GCCTTCTGCCCGGCGGCTTCAGCAAGACGCAGAGCT...TCTCCCCACTGAGCCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp ACTAGGAAAGGGCCACCAGGTCCAGCTGGGCACTGCCTGCCCCTGGAGCTGTACGGCCAGCAGCTGAGATaGTCATGTGCCCCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: TRKGPPGPAGHCLPLELYGQQLR*SCAPGP
Trigger: AGGCCCCGGGGCACATGATCATCTCAGCTGCTGGCC...GTACAGCTCCAGGGGCAGGCAGTGCCCAGCTGGACCTGGTGGCCCTTTCCTAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp GCCATGCCCTGCTTTTGGTCCCTTCTGGGTGCTAAGTGCCCCACCCTGAGGGCCTGCCAGGGCAGCACCTaGGACCTCCTAGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: AMPCFWSLLGAKCPTLRACQGST*DLLAST
Trigger: CGTGGAGGCTAGGAGGTCTCAGGTGCTGCCCTGGCA...GGCCCTCAGGGTGGGGCACTTAGCACCCAGAAGGGACCAAAAGCAGGGCATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp ACTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTGCAGTGGAGCGCCGGTaGCTCCAGGACCTTGCGGCA +
Preference number: 4 (lower is better)
Translates to: TPPGASAPSESLGTWRQLAVERR*LQDLAA
Trigger: TGCCGCAAGGTCCTGGAGGCACCGGCGCTCCACTGC...AAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGCTCAGTGGGGAGACGCGTCTGGCTCACCTaGCGCACAGACATCTGCCGG +
Preference number: 4 (lower is better)
Translates to: HLDGLHPALSSSRGSVGRRVWLT*RTDICR
Trigger: CCGGCAGATGTCTGTGCGGCAGGTGAGCCAGACGCG...TCTCCCCACTGAGCCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp TGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACTCTGGTTCAGCTCCGCGTCGATaGCAATGCCACAGTAGTTAC +
Preference number: 4 (lower is better)
Translates to: CPTLRAEGQTLGPGPHSGSAPRR*QCHSSY
Trigger: GTAACTACTGTGGCATTGGCATCGACGCGGAGCTGA...ACCAGAGTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp GTGAGATCAGACCCACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGTGGACCTGGCCCATGTaGACGACGCCCGTCACGCCC +
Preference number: 4 (lower is better)
Translates to: VRSDPPGRPASSTVQLKGWTWPM*TTPVTP
Trigger: GGGCGTGACGGGCGTCGTGCACATGGGCCAGGTCCA...CCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTGGGTCTGATCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp ACTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGGACCTGGCCCATGTaGACGACGCCCGTCACGCCC +
Preference number: 4 (lower is better)
Translates to: TPPGASAPSESLGTWRQLWTWPM*TTPVTP
Trigger: GGGCGTGACGGGCGTCGTGCACATGGGCCAGGTCCA...AAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp GGGCACGTGGAGGCAGCTTTGTCTTTGGCTGGGTGCACCCCAGCCTGGCCCAGATGGGAGCAGGAGGGCTaGAGGAGCTGGGTCTCCACA +
Preference number: 4 (lower is better)
Translates to: GHVEAALSLAGCTPAWPRWEQEG*RSWVST
Trigger: TGTGGAGACCCAGCTCCTGCAGCCCTCCTGCTCCCA...TCTGGGCCAGGCTGGGGTGCACCCAGCCAAAGACAAAGCTGCCTCCACGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GCCATGCCCTGCTTTTGGTCCCTTCTGGGTGCTAAGTGCCCCACCCTGAGGGCCGAACCCGGACCAGGCTaGGTGCCACACTCGTGCACG +
Preference number: 4 (lower is better)
Translates to: AMPCFWSLLGAKCPTLRAEPGPG*VPHSCT
Trigger: CGTGCACGAGTGTGGCACCCAGCCTGGTCCGGGTTC...GGCCCTCAGGGTGGGGCACTTAGCACCCAGAAGGGACCAAAAGCAGGGCATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GCCATGCCCTGCTTTTGGTCCCTTCTGGGTGCTAAGTGCCCCACCCTGAGGGCCCTGTGTCTCTCTGCCTaGACCCACGGCAGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: AMPCFWSLLGAKCPTLRALCLSA*THGSAP
Trigger: GGGAGCGCTGCCGTGGGTCCAGGCAGAGAGACACAG...GGCCCTCAGGGTGGGGCACTTAGCACCCAGAAGGGACCAAAAGCAGGGCATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp TGTGGACGTGGAGCTGCCTCCAGACCACCTGAAAACAAGGCTGGCGGGAGCAGATCCTCGGGGATGTGGTaGGCCCGCAGTGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: CGRGAASRPPENKAGGSRSSGMW*ARSAAS
Trigger: GGAGGCCGCACTGCGGGCCCACCACATCCCCGAGGA...TCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCAGCTCCACGTCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp AGACCACCTGAAAACAAGGCTGGCGGGAGCAGAGATGGCTCGAGCCCTTGGGCTTCCTCGGGGATGTGGTaGGCCCGCAGTGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RPPENKAGGSRDGSSPWASSGMW*ARSAAS
Trigger: GGAGGCCGCACTGCGGGCCCACCACATCCCCGAGGA...AGCCCAAGGGCTCGAGCCATCTCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CTGCCTCCAGACCACCTGAAAACAAGGCTGGCGGGAGCAGAGATGGCTCGAGCCCGGCACAGCTCCAGGTaGCCAGGGTCCTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: LPPDHLKTRLAGAEMARARHSSR*PGSSGM
Trigger: CATCCCCGAGGACCCTGGCCACCTGGAGCTGTGCCG...GGCTCGAGCCATCTCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTGCACCGCCGATGACCCAGGCCTCTaGCGTGGCCTCGCCGGACCC +
Preference number: 4 (lower is better)
Translates to: LLLHVHGLFTPPKLLCTADDPGL*RGLAGP
Trigger: GGGTCCGGCGAGGCCACGCCAGAGGCCTGGGTCATC...GGCGGTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CTGAGCAGATGTCGGCTCACACAGGCACTGGGAACTGCACATCAACAGCGGGCATCGGGACTCTCGGCCTaGCGGCCGAGCAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: LSRCRLTQALGTAHQQRASGLSA*RPSSGR
Trigger: CCTGCCGCTGCTCGGCCGCCAGGCCGAGAGTCCCGA...TGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCCGACATCTGCTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GTGAGATCAGACCCACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGAGCCCACCCTGGACCTaGCCCATGTGCACGACGCCC +
Preference number: 4 (lower is better)
Translates to: VRSDPPGRPASSTVQLKGSPPWT*PMCTTP
Trigger: GGGCGTCGTGCACATGGGCCAGGTCCAGGGTGGGCT...CCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTGGGTCTGATCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGCTCAGTGGGGAGATGGCGGGAGCAGAGATaGCTCGAGCCCTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: HLDGLHPALSSSRGSVGRWREQR*LEPLGC
Trigger: GCAGCCCAAGGGCTCGAGCCATCTCTGCTCCCGCCA...TCTCCCCACTGAGCCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGCTCAGTGGGGAGAGCTGCTCTTAAGGACTaGCCAGGGGGACGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: HLDGLHPALSSSRGSVGRAALKD*PGGRPE
Trigger: CTCGGGCCGTCCCCCTGGCCAGTCCTTAAGAGCAGC...TCTCCCCACTGAGCCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp AATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTGGTCAGGGCGCTGCTCTTAAGGACTaGCCAGGGGGACGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: NGMRAGPAPSLGRCCGQGAALKD*PGGRPE
Trigger: CTCGGGCCGTCCCCCTGGCCAGTCCTTAAGAGCAGC...GCCCTGACCACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGCCACCAGGTCCAGCTaGGCACTGCCTGCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LLPGPVHHLNPWARGGSFATRSS*ALPAPG
Trigger: TCCAGGGGCAGGCAGTGCCCAGCTGGACCTGGTGGC...AAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp AATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTGGTCAGGGCTGGGACCGTTTCTCGTaGGGGAGTCGGGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: NGMRAGPAPSLGRCCGQGWDRFS*GSRGFP
Trigger: GGGGAAGCCCCGACTCCCCCACGAGAAACGGTCCCA...GCCCTGACCACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp GCGTGGAAAGTGCTAGCGTGGGGTCTGGGGCTGAAAGCCAGCTCCTCCTCCACGAGGCCACGCCCACCTTaGGCCAGCCAGGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: AWKVLAWGLGLKASSSSTRPRPP*ASQGRS
Trigger: AGATCTACCCTGGCTGGCTCAAGGTGGGCGTGGCCT...CGTGGAGGAGGAGCTGGCTTTCAGCCCCAGACCCCACGCTAGCACTTTCCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp CTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTGCACCGCCTGGTCCAGCGGTCCATaGGCACGGCGTCGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: LLLHVHGLFTPPKLLCTAWSSGP*ARRRPR
Trigger: ACGAGGCCGACGCCGTGCTCATGGACCGCTGGACCA...GGCGGTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp GTGAGATCAGACCCACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGGTGTCACCAATGGGATaGGGGCGGGTCCCGCTCCGT +
Preference number: 4 (lower is better)
Translates to: VRSDPPGRPASSTVQLKGVSPMG*GRVPLR
Trigger: ACGGAGCGGGACCCGCCCTCATCCCATTGGTGACAC...CCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTGGGTCTGATCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp ACTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTAGCCGCACGTCTTCCTaGAGACCTCGCAGCGCGCTC +
Preference number: 4 (lower is better)
Translates to: TPPGASAPSESLGTWRQLSRTSS*RPRSAL
Trigger: GAGCGCGCTGCGAGGTCTGCAGGAAGACGTGCGGCT...AAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp AATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTGGTCAGGGCCCCGGACTCCGGAGTTaGCTGTGTCTCTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: NGMRAGPAPSLGRCCGQGPGLRS*LCLSAW
Trigger: CCAGGCAGAGAGACACAGGCAACTCCGGAGTCCGGG...GCCCTGACCACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTCCACAGAGCGGGCCGTaGTCTTCGGGGTCACTCGCA +
Preference number: 4 (lower is better)
Translates to: LLPGPVHHLNPWARGGSFPQSGP*SSGSLA
Trigger: TGCGAGTGACCCCGAAGAGCACGGCCCGCTCTGTGG...AAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp GGGCACGTGGAGGCAGCTTTGTCTTTGGCTGGGTGCACCCCAGCCTGGCCCAGAAGGCTCCTCTTCCCGTaGCTGGTGGAAGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GHVEAALSLAGCTPAWPRRLLFP*LVEVQA
Trigger: AGCCTGGACTTCCACCAGGCACGGGAAGAGGAGCCT...TCTGGGCCAGGCTGGGGTGCACCCAGCCAAAGACAAAGCTGCCTCCACGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp GCGTGGAAAGTGCTAGCGTGGGGTCTGGGGCTGAAAGCCAGCTCCTCCTCCACGTCCTGCCGCTCCACCTaGAGCCGGATCTGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: AWKVLAWGLGLKASSSSTSCRST*SRICLC
Trigger: GCACAAGCAGATCCGGCTGCAGGTGGAGCGGCAGGA...CGTGGAGGAGGAGCTGGCTTTCAGCCCCAGACCCCACGCTAGCACTTTCCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CTGAGCAGATGTCGGCTCACACAGGCACTGGGAACTGCACATCAACAGCGGGCAGGCTCCCCGTCCACCTaGACCGGGGTGGCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: LSRCRLTQALGTAHQQRAGSPST*TGVALR
Trigger: CCTCAAGGCCACCCCGGTGCAGGTGGACGGGGAGCC...TGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCCGACATCTGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp GGGGCTGAAAGCCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACACGCTGCCCACACCTaGTGCCCAGGGCGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: GAESQLLLHVHGLFTPPKHAAHT*CPGRGG
Trigger: ACCTCCCCGCCCTGGGCAGCAGGTGTGGGCAGCGTG...TTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGGCTTTCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTCACGCTGCCCACACCTaGTGCCCAGGGCGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PGPVHHLNPWARGGSFVFHAAHT*CPGRGG
Trigger: ACCTCCCCGCCCTGGGCAGCAGGTGTGGGCAGCGTG...AAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp AATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTGGTCAGGGCCTTCTGGGTGCTAAGTaGCCCACCCTGAGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: NGMRAGPAPSLGRCCGQGLLGAK*PTLRAE
Trigger: CTCGGCCCTCAGGGTGGGGCACTTAGCACCCAGAAG...GCCCTGACCACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp ACTAGGAAAGGGCCACCAGGTCCAGCTGGGCACTGCCTGCCCCTGGAGCTGTACCTTCTGGGTGCTAAGTaGCCCACCCTGAGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: TRKGPPGPAGHCLPLELYLLGAK*PTLRAE
Trigger: CTCGGCCCTCAGGGTGGGGCACTTAGCACCCAGAAG...GTACAGCTCCAGGGGCAGGCAGTGCCCAGCTGGACCTGGTGGCCCTTTCCTAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp GCGTGGAAAGTGCTAGCGTGGGGTCTGGGGCTGAAAGCCAGCTCCTCCTCCACGCCAGCCTGGCCCAGATaGAGGACCCTCCACCAAGCT +
Preference number: 4 (lower is better)
Translates to: AWKVLAWGLGLKASSSSTPAWPR*RTLHQA
Trigger: AGCTTGGTGGAGGGTCCTGCATCTGGGCCAGGCTGG...CGTGGAGGAGGAGCTGGCTTTCAGCCCCAGACCCCACGCTAGCACTTTCCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp TGTGTCACCAATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTCGGGGGCCGAAGCAGTaGGCTACAGGAACCCGGACC +
Preference number: 4 (lower is better)
Translates to: CVTNGMRAGPAPSLGRCCRGPKQ*ATGTRT
Trigger: GGTCCGGGTTCCTGTAGCCCACTGCTTCGGCCCCCG...ACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATTGGTGACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGCTCAGTGGGGAGATCACACACTTCGCAGTaGAGCGCCGGTGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HLDGLHPALSSSRGSVGRSHTSQ*SAGASR
Trigger: CCTGGAGGCACCGGCGCTCCACTGCGAAGTGTGTGA...TCTCCCCACTGAGCCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCCCATCCTGGTGGCACTaGCGGCAGTCACTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: LPGPVHHLNPWARGGSFVPSWWH*RQSLQA
Trigger: CGCCTGCAGTGACTGCCGCCAGTGCCACCAGGATGG...GACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGCTCAGTGGGGAGATGGTGCCCATCCTGGTaGCACTGGCGGCAGTCACTG +
Preference number: 4 (lower is better)
Translates to: HLDGLHPALSSSRGSVGRWCPSW*HWRQSL
Trigger: CAGTGACTGCCGCCAGTGCCACCAGGATGGGCACCA...TCTCCCCACTGAGCCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CTGCAGGAGCTGGGTCTCCACACGCTGACGAGGGATAGGACTGAGCAGATGTCGCAGAGGGAGTGCGCCTaGACCCCGCACCACTCGCAG +
Preference number: 4 (lower is better)
Translates to: LQELGLHTLTRDRTEQMSQRECA*TPHHSQ
Trigger: CTGCGAGTGGTGCGGGGTCCAGGCGCACTCCCTCTG...CGACATCTGCTCAGTCCTATCCCTCGTCAGCGTGTGGAGACCCAGCTCCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGCTCAGTGGGGAGAGCCACCTCCACCAGCTaGAAGCTCTCGGGACTCTCG +
Preference number: 4 (lower is better)
Translates to: HLDGLHPALSSSRGSVGRATSTS*KLSGLS
Trigger: CGAGAGTCCCGAGAGCTTCCAGCTGGTGGAGGTGGC...TCTCCCCACTGAGCCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GCCATGCCCTGCTTTTGGTCCCTTCTGGGTGCTAAGTGCCCCACCCTGAGGGCCGCCACCTCCACCAGCTaGAAGCTCTCGGGACTCTCG +
Preference number: 4 (lower is better)
Translates to: AMPCFWSLLGAKCPTLRAATSTS*KLSGLS
Trigger: CGAGAGTCCCGAGAGCTTCCAGCTGGTGGAGGTGGC...GGCCCTCAGGGTGGGGCACTTAGCACCCAGAAGGGACCAAAAGCAGGGCATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCCGGAAGCAGGGCACCTaGGAGAACAGGTGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: LPGPVHHLNPWARGGSFVRKQGT*ENRWSP
Trigger: CGGGCTCCACCTGTTCTCCCAGGTGCCCTGCTTCCG...GACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGCTCAGTGGGGAGAGCACTGCCAGCCTCGTaGGCATCCAGCAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: HLDGLHPALSSSRGSVGRALPAS*ASSRMV
Trigger: GACCATCCTGCTGGATGCCCACGAGGCTGGCAGTGC...TCTCCCCACTGAGCCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTGCACCGCCGAGCGCAGCCCACCCTaGACCTGGCCCATGTGCACG +
Preference number: 4 (lower is better)
Translates to: LLLHVHGLFTPPKLLCTAERSPP*TWPMCT
Trigger: CGTGCACATGGGCCAGGTCCAGGGTGGGCTGCGCTC...GGCGGTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp AGACCACCTGAAAACAAGGCTGGCGGGAGCAGAGATGGCTCGAGCCCTTGGGCTGGGCCGGCCACTGTGTaGACGTGGAGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RPPENKAGGSRDGSSPWAGPATV*TWSCLQ
Trigger: CTGGAGGCAGCTCCACGTCCACACAGTGGCCGGCCC...AGCCCAAGGGCTCGAGCCATCTCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp ACTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTGCAGCCTGTGTCTGCTaGGGCAGGGACACACCAGGG +
Preference number: 4 (lower is better)
Translates to: TPPGASAPSESLGTWRQLAACVC*GRDTPG
Trigger: CCCTGGTGTGTCCCTGCCCCAGCAGACACAGGCTGC...AAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTGCCCGGCCCACACTCTaGTGCTGCCAGGGCAGCACC +
Preference number: 4 (lower is better)
Translates to: PGPVHHLNPWARGGSFVFARPTL*CCQGST
Trigger: GGTGCTGCCCTGGCAGCACCAGAGTGTGGGCCGGGC...AAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp TGTGGACGTGGAGCTGCCTCCAGACCACCTGAAAACAAGGCTGGCGGGAGCAGAAGCTGTCTGGGGGCGTaGGAGCAGGAGGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CGRGAASRPPENKAGGSRSCLGA*EQEGCR
Trigger: CCTGCAGCCCTCCTGCTCCCACGCCCCCAGACAGCT...TCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCAGCTCCACGTCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp CACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGCTCAGTGGGGAGAAGAAGGTGGGCTTGGTaGGCGTCACCTTCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: HLDGLHPALSSSRGSVGRRRWAW*ASPSGS
Trigger: GCTTCCGGAAGGTGACGCTCACCAAGCCCACCTTCT...TCTCCCCACTGAGCCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp CCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTCGGCCAGCCCCCAGATaGAGTCGGAGCAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PGPVHHLNPWARGGSFVFRPAPR*SRSRGG
Trigger: GCCACCTCTGCTCCGACTTCATCTGGGGGCTGGCCG...AAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp CCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTGCACCCAGGCGGGACACCGTaGCGAGGCGGAACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PAPPPRAWAVYTSQTPLHPGGTP*RGGTGF
Trigger: GAAGCCAGTTCCGCCTCGTCACGGTGTCCCGCCTGG...GTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp CTGCAGGAGCTGGGTCTCCACACGCTGACGAGGGATAGGACTGAGCAGATGTCGGGCCAGCAGCTGAGATaGTCATGTGCCCCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: LQELGLHTLTRDRTEQMSGQQLR*SCAPGP
Trigger: AGGCCCCGGGGCACATGATCATCTCAGCTGCTGGCC...CGACATCTGCTCAGTCCTATCCCTCGTCAGCGTGTGGAGACCCAGCTCCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp GCGTGGAAAGTGCTAGCGTGGGGTCTGGGGCTGAAAGCCAGCTCCTCCTCCACGCTTAGGGCCAGCAGCTaGGATGATCATGTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: AWKVLAWGLGLKASSSSTLRASS*DDHVPR
Trigger: CCGGGGCACATGATCATCTCAGCTGCTGGCCCTAAG...CGTGGAGGAGGAGCTGGCTTTCAGCCCCAGACCCCACGCTAGCACTTTCCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp GCCATGCCCTGCTTTTGGTCCCTTCTGGGTGCTAAGTGCCCCACCCTGAGGGCCTGCCTCCAGACCACCTaGAAACAAGGCTGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: AMPCFWSLLGAKCPTLRACLQTT*KQGWRE
Trigger: CTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCA...GGCCCTCAGGGTGGGGCACTTAGCACCCAGAAGGGACCAAAAGCAGGGCATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp CTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTGCACCGCCGTGTCACCAATGGGATaGGGGCGGGTCCCGCTCCGT +
Preference number: 4 (lower is better)
Translates to: LLLHVHGLFTPPKLLCTAVSPMG*GRVPLR
Trigger: ACGGAGCGGGACCCGCCCTCATCCCATTGGTGACAC...GGCGGTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp AATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTGGTCAGGGCCCGAGGGGCACAAAGTaGGATCAGACCCACCTGGAC +
Preference number: 4 (lower is better)
Translates to: NGMRAGPAPSLGRCCGQGPRGTK*DQTHLD
Trigger: GTCCAGGTGGGTCTGATCTCACTTTGTGCCCCTCGG...GCCCTGACCACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp GCCATGCCCTGCTTTTGGTCCCTTCTGGGTGCTAAGTGCCCCACCCTGAGGGCCTGGGTGCCACACTCGTaGACGGGATCCTCACGTGCT +
Preference number: 4 (lower is better)
Translates to: AMPCFWSLLGAKCPTLRAWVPHS*TGSSRA
Trigger: AGCACGTGAGGATCCCGTGCACGAGTGTGGCACCCA...GGCCCTCAGGGTGGGGCACTTAGCACCCAGAAGGGACCAAAAGCAGGGCATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp TGTGTCACCAATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTCCGGACCAGGCTGGGTaGCACACTCGTGCACGGGAT +
Preference number: 4 (lower is better)
Translates to: CVTNGMRAGPAPSLGRCCPDQAG*HTRARD
Trigger: ATCCCGTGCACGAGTGTGGCACCCAGCCTGGTCCGG...ACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATTGGTGACACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp TGTGGACGTGGAGCTGCCTCCAGACCACCTGAAAACAAGGCTGGCGGGAGCAGAAGCCGCACGTCTTCCTaGAGACCTCGCAGCGCGCTC +
Preference number: 4 (lower is better)
Translates to: CGRGAASRPPENKAGGSRSRTSS*RPRSAL
Trigger: GAGCGCGCTGCGAGGTCTGCAGGAAGACGTGCGGCT...TCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCAGCTCCACGTCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp TGTGTCACCAATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTCCGCGGCCTCCACGATaGGGAAGCTCTGCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: CVTNGMRAGPAPSLGRCCPRPPR*GSSASC
Trigger: GCAAGACGCAGAGCTTCCGCATCGTGGAGGCCGCGG...ACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATTGGTGACACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CTGCAGGAGCTGGGTCTCCACACGCTGACGAGGGATAGGACTGAGCAGATGTCGCCGCGGCCTCCACGATaGGGAAGCTCTGCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: LQELGLHTLTRDRTEQMSPRPPR*GSSASC
Trigger: GCAAGACGCAGAGCTTCCGCATCGTGGAGGCCGCGG...CGACATCTGCTCAGTCCTATCCCTCGTCAGCGTGTGGAGACCCAGCTCCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp TGTGGACGTGGAGCTGCCTCCAGACCACCTGAAAACAAGGCTGGCGGGAGCAGACGCGTCTGGCTCACCTaGCGCACAGACATCTGCCGG +
Preference number: 4 (lower is better)
Translates to: CGRGAASRPPENKAGGSRRVWLT*RTDICR
Trigger: CCGGCAGATGTCTGTGCGGCAGGTGAGCCAGACGCG...TCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCAGCTCCACGTCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CTGCCTCCAGACCACCTGAAAACAAGGCTGGCGGGAGCAGAGATGGCTCGAGCCGTAGCCCCGGCCTCATaGAGCAGGCTGCTGTACTCC +
Preference number: 4 (lower is better)
Translates to: LPPDHLKTRLAGAEMARAVAPAS*SRLLYS
Trigger: GGAGTACAGCAGCCTGCTGCATGAGGCCGGGGCTAC...GGCTCGAGCCATCTCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp AATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTGGTCAGGGCGTAGCTTCCGGAAGCTaGAGAGCAGGTCTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: NGMRAGPAPSLGRCCGQGVASGS*RAGLGP
Trigger: AGGGCCGAGACCTGCTCTGCAGCTTCCGGAAGCTAC...GCCCTGACCACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp GTGAGATCAGACCCACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGTGCCGTGTCGTTCTCTaGACTGCCAGCCTCGTGGGC +
Preference number: 4 (lower is better)
Translates to: VRSDPPGRPASSTVQLKGCRVVL*TASLVG
Trigger: GCCCACGAGGCTGGCAGTGCAGAGAACGACACGGCA...CCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTGGGTCTGATCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp ACTAGGAAAGGGCCACCAGGTCCAGCTGGGCACTGCCTGCCCCTGGAGCTGTACACCTGCAGCCGGATCTaGTTGTGCAGGCTCCGAGAG +
Preference number: 4 (lower is better)
Translates to: TRKGPPGPAGHCLPLELYTCSRI*LCRLRE
Trigger: CTCTCGGAGCCTGCACAAGCAGATCCGGCTGCAGGT...GTACAGCTCCAGGGGCAGGCAGTGCCCAGCTGGACCTGGTGGCCCTTTCCTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp GCCATGCCCTGCTTTTGGTCCCTTCTGGGTGCTAAGTGCCCCACCCTGAGGGCCGCCCTCCTCGGCTTCTaGTTGGCCTTCCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: AMPCFWSLLGAKCPTLRAALLGF*LAFLSM
Trigger: CATGCTGAGGAAGGCCAAGCAGAAGCCGAGGAGGGC...GGCCCTCAGGGTGGGGCACTTAGCACCCAGAAGGGACCAAAAGCAGGGCATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCCCCACCTGGACGGCCTaGATCCAGCACTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LPGPVHHLNPWARGGSFVPTWTA*IQHCPA
Trigger: AGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTGGG...GACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTGCACCGGGGGCCGAAGCAGTaGGCTACAGGAACCCGGACC +
Preference number: 4 (lower is better)
Translates to: PAPPPRAWAVYTSQTPLHRGPKQ*ATGTRT
Trigger: GGTCCGGGTTCCTGTAGCCCACTGCTTCGGCCCCCG...GTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CTGCAGGAGCTGGGTCTCCACACGCTGACGAGGGATAGGACTGAGCAGATGTCGCAGAACTTGCGCTTGTaGAGCCCCCGGGGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: LQELGLHTLTRDRTEQMSQNLRL*SPRGPK
Trigger: CTTCGGCCCCCGGGGGCTCCACAAGCGCAAGTTCTG...CGACATCTGCTCAGTCCTATCCCTCGTCAGCGTGTGGAGACCCAGCTCCTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CTGCCTCCAGACCACCTGAAAACAAGGCTGGCGGGAGCAGAGATGGCTCGAGCCTCACACACTTCGCAGTaGAGCGCCGGTGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LPPDHLKTRLAGAEMARASHTSQ*SAGASR
Trigger: CCTGGAGGCACCGGCGCTCCACTGCGAAGTGTGTGA...GGCTCGAGCCATCTCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp AGACCACCTGAAAACAAGGCTGGCGGGAGCAGAGATGGCTCGAGCCCTTGGGCTCCATCCTGGTGGCACTaGCGGCAGTCACTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: RPPENKAGGSRDGSSPWAPSWWH*RQSLQA
Trigger: CGCCTGCAGTGACTGCCGCCAGTGCCACCAGGATGG...AGCCCAAGGGCTCGAGCCATCTCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CTGCCTCCAGACCACCTGAAAACAAGGCTGGCGGGAGCAGAGATGGCTCGAGCCTGGTGCCCATCCTGGTaGCACTGGCGGCAGTCACTG +
Preference number: 4 (lower is better)
Translates to: LPPDHLKTRLAGAEMARAWCPSW*HWRQSL
Trigger: CAGTGACTGCCGCCAGTGCCACCAGGATGGGCACCA...GGCTCGAGCCATCTCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp TGTGTCACCAATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTCTGTGTCTCTCTGCCTaGACCCACGGCAGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: CVTNGMRAGPAPSLGRCCLCLSA*THGSAP
Trigger: GGGAGCGCTGCCGTGGGTCCAGGCAGAGAGACACAG...ACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATTGGTGACACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGCTCAGTGGGGAGAGTGACGAGGCGGAACTaGCTTCTTCTCACCGCGTCG +
Preference number: 4 (lower is better)
Translates to: HLDGLHPALSSSRGSVGRVTRRN*LLLTAS
Trigger: CGACGCGGTGAGAAGAAGCCAGTTCCGCCTCGTCAC...TCTCCCCACTGAGCCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp AGACCACCTGAAAACAAGGCTGGCGGGAGCAGAGATGGCTCGAGCCCTTGGGCTCGGAAGCAGGGCACCTaGGAGAACAGGTGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: RPPENKAGGSRDGSSPWARKQGT*ENRWSP
Trigger: CGGGCTCCACCTGTTCTCCCAGGTGCCCTGCTTCCG...AGCCCAAGGGCTCGAGCCATCTCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CTGAGCAGATGTCGGCTCACACAGGCACTGGGAACTGCACATCAACAGCGGGCATGCCCAGGGGCAGGATaGCCACAGAAGGCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: LSRCRLTQALGTAHQQRACPGAG*PQKAPG
Trigger: GCCCGGAGCCTTCTGTGGCCATCCTGCCCCTGGGCA...TGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCCGACATCTGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp ACTAGGAAAGGGCCACCAGGTCCAGCTGGGCACTGCCTGCCCCTGGAGCTGTACTCATCTGCACGATCTTaGGGGGCTCTGCGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: TRKGPPGPAGHCLPLELYSSARS*GALRLP
Trigger: CGGCAGACGCAGAGCCCCCCAAGATCGTGCAGATGA...GTACAGCTCCAGGGGCAGGCAGTGCCCAGCTGGACCTGGTGGCCCTTTCCTAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GCGTGGAAAGTGCTAGCGTGGGGTCTGGGGCTGAAAGCCAGCTCCTCCTCCACGGTGGCTTCTCAAACCTaGTGTCGCTGTCGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: AWKVLAWGLGLKASSSSTVASQT*CRCRSP
Trigger: GGGGCTCCGACAGCGACACCAGGTTTGAGAAGCCAC...CGTGGAGGAGGAGCTGGCTTTCAGCCCCAGACCCCACGCTAGCACTTTCCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTGCACAGCCCACCCTGGACCTaGCCCATGTGCACGACGCCC +
Preference number: 4 (lower is better)
Translates to: PAPPPRAWAVYTSQTPLHSPPWT*PMCTTP
Trigger: GGGCGTCGTGCACATGGGCCAGGTCCAGGGTGGGCT...GTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GGGGCTGAAAGCCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAAGGGCCGGCCACTGTGTaGACGTGGAGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GAESQLLLHVHGLFTPPKGPATV*TWSCLQ
Trigger: CTGGAGGCAGCTCCACGTCCACACAGTGGCCGGCCC...TTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGGCTTTCAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp ACTAGGAAAGGGCCACCAGGTCCAGCTGGGCACTGCCTGCCCCTGGAGCTGTACCTCCTAGCCTCCACGTaGACAGAGGTTCTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: TRKGPPGPAGHCLPLELYLLAST*TEVLLP
Trigger: GGGGAGGAGAACCTCTGTCCACGTGGAGGCTAGGAG...GTACAGCTCCAGGGGCAGGCAGTGCCCAGCTGGACCTGGTGGCCCTTTCCTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp TGTGTCACCAATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTGGGAGATCCGCACCGTaGGACCGTTTCTCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: CVTNGMRAGPAPSLGRCCGRSAP*DRFSWG
Trigger: CCCCCACGAGAAACGGTCCCACGGTGCGGATCTCCC...ACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATTGGTGACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp GCTAAGTGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACACTTCTCATGAGACATaGAATTGCAGACGTCGCACA +
Preference number: 4 (lower is better)
Translates to: AKCPTLRAEGQTLGPGPHTSHET*NCRRRT
Trigger: TGTGCGACGTCTGCAATTTCATGTCTCATGAGAAGT...GTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCACTTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp TGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACTCTGGTTTCAGGCACTTCTCATaGGACATGAAATTGCAGACG +
Preference number: 4 (lower is better)
Translates to: CPTLRAEGQTLGPGPHSGFRHFS*DMKLQT
Trigger: CGTCTGCAATTTCATGTCTCATGAGAAGTGCCTGAA...ACCAGAGTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp CCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTGCAGGTCTCGGCCCTTaGGGCCTCCACTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: PGPVHHLNPWARGGSFVFAGLGP*GLHSWG
Trigger: ACCCCAAGAGTGGAGGCCTCAAGGGCCGAGACCTGC...AAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp CTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTTGCAGGCTCCGAGAGTaGCTGATCTTCTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LLPGPVHHLNPWARGGSFCRLRE*LIFCSP
Trigger: GGGGCTGCAGAAGATCAGTCACTCTCGGAGCCTGCA...AAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp GCCATGCCCTGCTTTTGGTCCCTTCTGGGTGCTAAGTGCCCCACCCTGAGGGCCCCCTGGAGCTGTACCTaGGATCCAAGCTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: AMPCFWSLLGAKCPTLRAPWSCT*DPSCHL
Trigger: CAGATGGCAGCTTGGATCTCAGGTACAGCTCCAGGG...GGCCCTCAGGGTGGGGCACTTAGCACCCAGAAGGGACCAAAAGCAGGGCATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp CTGCCTCCAGACCACCTGAAAACAAGGCTGGCGGGAGCAGAGATGGCTCGAGCCTGGGTCTCCACACGCTaGCGAGGGATAGGACTGAGC +
Preference number: 4 (lower is better)
Translates to: LPPDHLKTRLAGAEMARAWVSTR*RGIGLS
Trigger: GCTCAGTCCTATCCCTCGTCAGCGTGTGGAGACCCA...GGCTCGAGCCATCTCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTGCACCCGGACCAGGCTGGGTaGCACACTCGTGCACGGGAT +
Preference number: 4 (lower is better)
Translates to: PAPPPRAWAVYTSQTPLHPDQAG*HTRARD
Trigger: ATCCCGTGCACGAGTGTGGCACCCAGCCTGGTCCGG...GTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp GTGAGATCAGACCCACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGACGATGCGGAAGCTCTaGGTCTTGCTGAAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: VRSDPPGRPASSTVQLKGTMRKL*VLLKPP
Trigger: CGGCGGCTTCAGCAAGACGCAGAGCTTCCGCATCGT...CCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTGGGTCTGATCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CTGAGCAGATGTCGGCTCACACAGGCACTGGGAACTGCACATCAACAGCGGGCACCACAGAGCGGGCCGTaGTCTTCGGGGTCACTCGCA +
Preference number: 4 (lower is better)
Translates to: LSRCRLTQALGTAHQQRAPQSGP*SSGSLA
Trigger: TGCGAGTGACCCCGAAGAGCACGGCCCGCTCTGTGG...TGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCCGACATCTGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp ACTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTGCGGGGCTACATCCCTaGTCTCTGCCACGTAGAACC +
Preference number: 4 (lower is better)
Translates to: TPPGASAPSESLGTWRQLAGLHP*SLPRRT
Trigger: GGTTCTACGTGGCAGAGAGCAGGGATGTAGCCCCGC...AAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CTGCCTCCAGACCACCTGAAAACAAGGCTGGCGGGAGCAGAGATGGCTCGAGCCGTAGCTTCCGGAAGCTaGAGAGCAGGTCTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: LPPDHLKTRLAGAEMARAVASGS*RAGLGP
Trigger: AGGGCCGAGACCTGCTCTGCAGCTTCCGGAAGCTAC...GGCTCGAGCCATCTCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp AGACCACCTGAAAACAAGGCTGGCGGGAGCAGAGATGGCTCGAGCCCTTGGGCTTGCCGTGTCGTTCTCTaGACTGCCAGCCTCGTGGGC +
Preference number: 4 (lower is better)
Translates to: RPPENKAGGSRDGSSPWACRVVL*TASLVG
Trigger: GCCCACGAGGCTGGCAGTGCAGAGAACGACACGGCA...AGCCCAAGGGCTCGAGCCATCTCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTAGGCTCCTCTTCCCGTaGCTGGTGGAAGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LLPGPVHHLNPWARGGSFRLLFP*LVEVQA
Trigger: AGCCTGGACTTCCACCAGGCACGGGAAGAGGAGCCT...AAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCACCTGCAGCCGGATCTaGTTGTGCAGGCTCCGAGAG +
Preference number: 4 (lower is better)
Translates to: LPGPVHHLNPWARGGSFVTCSRI*LCRLRE
Trigger: CTCTCGGAGCCTGCACAAGCAGATCCGGCTGCAGGT...GACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp TGTGGACGTGGAGCTGCCTCCAGACCACCTGAAAACAAGGCTGGCGGGAGCAGATCCTGCCGCTCCACCTaGAGCCGGATCTGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: CGRGAASRPPENKAGGSRSCRST*SRICLC
Trigger: GCACAAGCAGATCCGGCTGCAGGTGGAGCGGCAGGA...TCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCAGCTCCACGTCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCGCAGCCCGTCGTCCATaGGTGGCTTCTCAAACCTGG +
Preference number: 4 (lower is better)
Translates to: LPGPVHHLNPWARGGSFVAARRP*VASQTW
Trigger: CCAGGTTTGAGAAGCCACGCATGGACGACGGGCTGC...GACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp AATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTGGTCAGGGCGCCTTCCTCAGCATGTaGACCTTAGGGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: NGMRAGPAPSLGRCCGQGAFLSM*TLGPAA
Trigger: AGCTGCTGGCCCTAAGGTGCACATGCTGAGGAAGGC...GCCCTGACCACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CTGCCTCCAGACCACCTGAAAACAAGGCTGGCGGGAGCAGAGATGGCTCGAGCCGCCCTCCTCGGCTTCTaGTTGGCCTTCCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: LPPDHLKTRLAGAEMARAALLGF*LAFLSM
Trigger: CATGCTGAGGAAGGCCAAGCAGAAGCCGAGGAGGGC...GGCTCGAGCCATCTCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp TGTGTCACCAATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTCCCACCTGGACGGCCTaGATCCAGCACTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: CVTNGMRAGPAPSLGRCCPTWTA*IQHCPA
Trigger: AGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTGGG...ACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATTGGTGACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp AGACCACCTGAAAACAAGGCTGGCGGGAGCAGAGATGGCTCGAGCCCTTGGGCTCTGGCAGCCTGTGTCTaGTGGGGCAGGGACACACCA +
Preference number: 4 (lower is better)
Translates to: RPPENKAGGSRDGSSPWALAACV*WGRDTP
Trigger: TGGTGTGTCCCTGCCCCAGCAGACACAGGCTGCCAG...AGCCCAAGGGCTCGAGCCATCTCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp AATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTGGTCAGGGCTGCACCGCCATGCCCTaGTTTTGGTCCCTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: NGMRAGPAPSLGRCCGQGCTAMP*FWSLLG
Trigger: ACCCAGAAGGGACCAAAAGCAGGGCATGGCGGTGCA...GCCCTGACCACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp ACTAGGAAAGGGCCACCAGGTCCAGCTGGGCACTGCCTGCCCCTGGAGCTGTACTCCTCTGCACCGCCATaGCCTGCTTTTGGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: TRKGPPGPAGHCLPLELYSSAPP*PAFGPF
Trigger: GAAGGGACCAAAAGCAGGGCATGGCGGTGCAGAGGA...GTACAGCTCCAGGGGCAGGCAGTGCCCAGCTGGACCTGGTGGCCCTTTCCTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CTGAGCAGATGTCGGCTCACACAGGCACTGGGAACTGCACATCAACAGCGGGCAGAACCCGGACCAGGCTaGGTGCCACACTCGTGCACG +
Preference number: 4 (lower is better)
Translates to: LSRCRLTQALGTAHQQRAEPGPG*VPHSCT
Trigger: CGTGCACGAGTGTGGCACCCAGCCTGGTCCGGGTTC...TGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCCGACATCTGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp ACTAGGAAAGGGCCACCAGGTCCAGCTGGGCACTGCCTGCCCCTGGAGCTGTACGAAGGGCACACAGTCTaGGTGGAGGTGCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: TRKGPPGPAGHCLPLELYEGHTV*VEVQLT
Trigger: TGTGAGCTGCACCTCCACCCAGACTGTGTGCCCTTC...GTACAGCTCCAGGGGCAGGCAGTGCCCAGCTGGACCTGGTGGCCCTTTCCTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGCTCAGTGGGGAGACCCGTCGTCCATGCGTaGCTTCTCAAACCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: HLDGLHPALSSSRGSVGRPVVHA*LLKPGV
Trigger: GACACCAGGTTTGAGAAGCCACGCATGGACGACGGG...TCTCCCCACTGAGCCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp TGTGTCACCAATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTGCCACTGTGTGGACGTaGAGCTGCCTCCAGACCACC +
Preference number: 4 (lower is better)
Translates to: CVTNGMRAGPAPSLGRCCATVWT*SCLQTT
Trigger: GGTGGTCTGGAGGCAGCTCCACGTCCACACAGTGGC...ACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATTGGTGACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGCTCAGTGGGGAGAAACATGTGTCACCAATaGGATGAGGGCGGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: HLDGLHPALSSSRGSVGRNMCHQ*DEGGSR
Trigger: GCGGGACCCGCCCTCATCCCATTGGTGACACATGTT...TCTCCCCACTGAGCCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp AATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTGGTCAGGGCGCTTTTGGTCCCTTCTaGGTGCTAAGTGCCCCACCC +
Preference number: 4 (lower is better)
Translates to: NGMRAGPAPSLGRCCGQGAFGPF*VLSAPP
Trigger: GGGTGGGGCACTTAGCACCCAGAAGGGACCAAAAGC...GCCCTGACCACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GGGCACGTGGAGGCAGCTTTGTCTTTGGCTGGGTGCACCCCAGCCTGGCCCAGAGCCATGCCCTGCTTTTaGTCCCTTCTGGGTGCTAAG +
Preference number: 4 (lower is better)
Translates to: GHVEAALSLAGCTPAWPRAMPCF*SLLGAK
Trigger: CTTAGCACCCAGAAGGGACCAAAAGCAGGGCATGGC...TCTGGGCCAGGCTGGGGTGCACCCAGCCAAAGACAAAGCTGCCTCCACGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GCGTGGAAAGTGCTAGCGTGGGGTCTGGGGCTGAAAGCCAGCTCCTCCTCCACGAGGCAGCTTTGTCTTTaGCTGGGTGCACCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: AWKVLAWGLGLKASSSSTRQLCL*LGAPQP
Trigger: AGGCTGGGGTGCACCCAGCCAAAGACAAAGCTGCCT...CGTGGAGGAGGAGCTGGCTTTCAGCCCCAGACCCCACGCTAGCACTTTCCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GGGGCTGAAAGCCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAAGGGAGATCCGCACCGTaGGACCGTTTCTCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GAESQLLLHVHGLFTPPKGRSAP*DRFSWG
Trigger: CCCCCACGAGAAACGGTCCCACGGTGCGGATCTCCC...TTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGGCTTTCAGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GGGCACGTGGAGGCAGCTTTGTCTTTGGCTGGGTGCACCCCAGCCTGGCCCAGAAACAAGAGTGCACGCTaGAGGCCACAAGCGGCCTTA +
Preference number: 4 (lower is better)
Translates to: GHVEAALSLAGCTPAWPRNKSAR*RPQAAL
Trigger: TAAGGCCGCTTGTGGCCTCCAGCGTGCACTCTTGTT...TCTGGGCCAGGCTGGGGTGCACCCAGCCAAAGACAAAGCTGCCTCCACGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp CTGCAGGAGCTGGGTCTCCACACGCTGACGAGGGATAGGACTGAGCAGATGTCGTGCCTCCAGACCACCTaGAAACAAGGCTGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: LQELGLHTLTRDRTEQMSCLQTT*KQGWRE
Trigger: CTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCA...CGACATCTGCTCAGTCCTATCCCTCGTCAGCGTGTGGAGACCCAGCTCCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp CTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTGCACCGCCCCGAGGGGCACAAAGTaGGATCAGACCCACCTGGAC +
Preference number: 4 (lower is better)
Translates to: LLLHVHGLFTPPKLLCTAPRGTK*DQTHLD
Trigger: GTCCAGGTGGGTCTGATCTCACTTTGTGCCCCTCGG...GGCGGTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp TGTGGACGTGGAGCTGCCTCCAGACCACCTGAAAACAAGGCTGGCGGGAGCAGATGGGTCTCCACACGCTaGCGAGGGATAGGACTGAGC +
Preference number: 4 (lower is better)
Translates to: CGRGAASRPPENKAGGSRWVSTR*RGIGLS
Trigger: GCTCAGTCCTATCCCTCGTCAGCGTGTGGAGACCCA...TCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCAGCTCCACGTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CTGAGCAGATGTCGGCTCACACAGGCACTGGGAACTGCACATCAACAGCGGGCACCCGGACTCCGGAGTTaGCTGTGTCTCTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LSRCRLTQALGTAHQQRAPGLRS*LCLSAW
Trigger: CCAGGCAGAGAGACACAGGCAACTCCGGAGTCCGGG...TGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCCGACATCTGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp AATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTGGTCAGGGCTACATCCCTGCTCTCTaGCACGTAGAACCGCGTCTG +
Preference number: 4 (lower is better)
Translates to: NGMRAGPAPSLGRCCGQGYIPAL*HVEPRL
Trigger: CAGACGCGGTTCTACGTGGCAGAGAGCAGGGATGTA...GCCCTGACCACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp ACTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTACAAACAGGGAGACGTaGGGGGCTACATCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: TPPGASAPSESLGTWRQLTNRET*GATSLL
Trigger: GAGCAGGGATGTAGCCCCGCACGTCTCCCTGTTTGT...AAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CTGAGCAGATGTCGGCTCACACAGGCACTGGGAACTGCACATCAACAGCGGGCAGTAGCCCCGGCCTCATaGAGCAGGCTGCTGTACTCC +
Preference number: 4 (lower is better)
Translates to: LSRCRLTQALGTAHQQRAVAPAS*SRLLYS
Trigger: GGAGTACAGCAGCCTGCTGCATGAGGCCGGGGCTAC...TGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCCGACATCTGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTGCACGCTGAGATGATCATGTaGCCCGGGGCCTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: PAPPPRAWAVYTSQTPLHAEMIM*PGAWTQ
Trigger: CTGGGTCCAGGCCCCGGGGCACATGATCATCTCAGC...GTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CTGAGCAGATGTCGGCTCACACAGGCACTGGGAACTGCACATCAACAGCGGGCAGCTGAGATGATCATGTaGCCCGGGGCCTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: LSRCRLTQALGTAHQQRAAEMIM*PGAWTQ
Trigger: CTGGGTCCAGGCCCCGGGGCACATGATCATCTCAGC...TGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCCGACATCTGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTCCGTCACTGGGAAGATaGTGTGGTCAGGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: LLPGPVHHLNPWARGGSFPSLGR*CGQGCS
Trigger: GCTACAGCCCTGACCACAGCATCTTCCCAGTGACGG...AAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTGCACCTGGCAGCCTGTGTCTaGTGGGGCAGGGACACACCA +
Preference number: 4 (lower is better)
Translates to: PAPPPRAWAVYTSQTPLHLAACV*WGRDTP
Trigger: TGGTGTGTCCCTGCCCCAGCAGACACAGGCTGCCAG...GTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGCTCAGTGGGGAGAACAGGCACTGGGAACTaGACATCAACAGCGGGCAAG +
Preference number: 4 (lower is better)
Translates to: HLDGLHPALSSSRGSVGRTGTGN*TSTAGK
Trigger: CTTGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGT...TCTCCCCACTGAGCCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CTGAGCAGATGTCGGCTCACACAGGCACTGGGAACTGCACATCAACAGCGGGCATGGGAGCAGGAGGGCTaGAGGAGCTGGGTCTCCACA +
Preference number: 4 (lower is better)
Translates to: LSRCRLTQALGTAHQQRAWEQEG*RSWVST
Trigger: TGTGGAGACCCAGCTCCTGCAGCCCTCCTGCTCCCA...TGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCCGACATCTGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp AATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTGGTCAGGGCCAATGCGTGTGTCTGTaGAGTTTGGCAGATGCGGGG +
Preference number: 4 (lower is better)
Translates to: NGMRAGPAPSLGRCCGQGQCVCL*SLADAG
Trigger: CCCCGCATCTGCCAAACTGCACAGACACACGCATTG...GCCCTGACCACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GTGAGATCAGACCCACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGGAAGGGCACACAGTCTaGGTGGAGGTGCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: VRSDPPGRPASSTVQLKGEGHTV*VEVQLT
Trigger: TGTGAGCTGCACCTCCACCCAGACTGTGTGCCCTTC...CCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTGGGTCTGATCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CTGCAGGAGCTGGGTCTCCACACGCTGACGAGGGATAGGACTGAGCAGATGTCGGTGACGAGGCGGAACTaGCTTCTTCTCACCGCGTCG +
Preference number: 4 (lower is better)
Translates to: LQELGLHTLTRDRTEQMSVTRRN*LLLTAS
Trigger: CGACGCGGTGAGAAGAAGCCAGTTCCGCCTCGTCAC...CGACATCTGCTCAGTCCTATCCCTCGTCAGCGTGTGGAGACCCAGCTCCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CTGAGCAGATGTCGGCTCACACAGGCACTGGGAACTGCACATCAACAGCGGGCAGCACTGCCAGCCTCGTaGGCATCCAGCAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: LSRCRLTQALGTAHQQRAALPAS*ASSRMV
Trigger: GACCATCCTGCTGGATGCCCACGAGGCTGGCAGTGC...TGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCCGACATCTGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp ACTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTCCCGTCGTCCATGCGTaGCTTCTCAAACCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: TPPGASAPSESLGTWRQLPVVHA*LLKPGV
Trigger: GACACCAGGTTTGAGAAGCCACGCATGGACGACGGG...AAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTGCACCGCCGAGATCAGACCCACCTaGACGGCCTGCATCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LLLHVHGLFTPPKLLCTAEIRPT*TACIQH
Trigger: GTGCTGGATGCAGGCCGTCCAGGTGGGTCTGATCTC...GGCGGTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTGCACCGCCCTCCTAGCCTCCACGTaGACAGAGGTTCTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LLLHVHGLFTPPKLLCTALLAST*TEVLLP
Trigger: GGGGAGGAGAACCTCTGTCCACGTGGAGGCTAGGAG...GGCGGTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CTGCAGGAGCTGGGTCTCCACACGCTGACGAGGGATAGGACTGAGCAGATGTCGAGCGGGCAAGCAGCGTaGAAAGTGCTAGCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: LQELGLHTLTRDRTEQMSSGQAA*KVLAWG
Trigger: ACCCCACGCTAGCACTTTCCACGCTGCTTGCCCGCT...CGACATCTGCTCAGTCCTATCCCTCGTCAGCGTGTGGAGACCCAGCTCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp TGTGTCACCAATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTAGCGGGCAAGCAGCGTaGAAAGTGCTAGCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: CVTNGMRAGPAPSLGRCCSGQAA*KVLAWG
Trigger: ACCCCACGCTAGCACTTTCCACGCTGCTTGCCCGCT...ACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATTGGTGACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp AATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTGGTCAGGGCGGCTCACACAGGCACTaGGAACTGCACATCAACAGC +
Preference number: 4 (lower is better)
Translates to: NGMRAGPAPSLGRCCGQGGSHRH*ELHINS
Trigger: GCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCC...GCCCTGACCACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
3UTR CAA 72 bp CAGACTCCTCCCGGGGCCAGTGCACCATCTGAATCCTaGGGCACGTGGAGGCAGCTTTGTCTTTGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: QTPPGASAPSES*GTWRQLCLWLG
Trigger: ACCCAGCCAAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp CTGAGCAGATGTCGGCTCACACAGGCACTGGGAACTGCACATCAACAGCGGGCATGCAGGCTCCGAGAGTaGCTGATCTTCTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LSRCRLTQALGTAHQQRACRLRE*LIFCSP
Trigger: GGGGCTGCAGAAGATCAGTCACTCTCGGAGCCTGCA...TGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCCGACATCTGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp GGGGCTGAAAGCCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTTAGGGCCAGCAGCTaGGATGATCATGTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: GAESQLLLHVHGLFTPPKLRASS*DDHVPR
Trigger: CCGGGGCACATGATCATCTCAGCTGCTGGCCCTAAG...TTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGGCTTTCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp GCCATGCCCTGCTTTTGGTCCCTTCTGGGTGCTAAGTGCCCCACCCTGAGGGCCACCTTCTCCCTTCCCTaGACACAAGGAAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: AMPCFWSLLGAKCPTLRATFSLP*TQGSHQ
Trigger: CTGGTGACTTCCTTGTGTTCAGGGAAGGGAGAAGGT...GGCCCTCAGGGTGGGGCACTTAGCACCCAGAAGGGACCAAAAGCAGGGCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp CCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTGCACGGCCAGTGCACCATCTaGATCCTTGGGCACGTGGAG +
Preference number: 4 (lower is better)
Translates to: PAPPPRAWAVYTSQTPLHGQCTI*ILGHVE
Trigger: CTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCC...GTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp GGGGCTGAAAGCCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAAGGCCAGTGCACCATCTaGATCCTTGGGCACGTGGAG +
Preference number: 4 (lower is better)
Translates to: GAESQLLLHVHGLFTPPKGQCTI*ILGHVE
Trigger: CTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCC...TTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGGCTTTCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CTGAGCAGATGTCGGCTCACACAGGCACTGGGAACTGCACATCAACAGCGGGCATGGGTGCCACACTCGTaGACGGGATCCTCACGTGCT +
Preference number: 4 (lower is better)
Translates to: LSRCRLTQALGTAHQQRAWVPHS*TGSSRA
Trigger: AGCACGTGAGGATCCCGTGCACGAGTGTGGCACCCA...TGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCCGACATCTGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTAGACAGCACAGAACTTaGGCTTGTGGAGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: PGPVHHLNPWARGGSFVFRQHRT*ACGAPG
Trigger: CCCGGGGGCTCCACAAGCGCAAGTTCTGTGCTGTCT...AAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp TGTGTCACCAATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTGTGCCTCCAGGACCTTaGGGCAGACAGCACAGAACT +
Preference number: 4 (lower is better)
Translates to: CVTNGMRAGPAPSLGRCCVPPGP*GRQHRT
Trigger: AGTTCTGTGCTGTCTGCCGCAAGGTCCTGGAGGCAC...ACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATTGGTGACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTACGATGCGGAAGCTCTaGGTCTTGCTGAAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: PGPVHHLNPWARGGSFVFTMRKL*VLLKPP
Trigger: CGGCGGCTTCAGCAAGACGCAGAGCTTCCGCATCGT...AAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp GGGGCTGAAAGCCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAAGCGGGGCTACATCCCTaGTCTCTGCCACGTAGAACC +
Preference number: 4 (lower is better)
Translates to: GAESQLLLHVHGLFTPPKAGLHP*SLPRRT
Trigger: GGTTCTACGTGGCAGAGAGCAGGGATGTAGCCCCGC...TTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGGCTTTCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp AGACCACCTGAAAACAAGGCTGGCGGGAGCAGAGATGGCTCGAGCCCTTGGGCTCCTCATGCAGCAGGCTaGTGTACTCCTCGGGAGACA +
Preference number: 4 (lower is better)
Translates to: RPPENKAGGSRDGSSPWAPHAAG*CTPRET
Trigger: TGTCTCCCGAGGAGTACAGCAGCCTGCTGCATGAGG...AGCCCAAGGGCTCGAGCCATCTCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTGCAGCCCGTCGTCCATaGGTGGCTTCTCAAACCTGG +
Preference number: 4 (lower is better)
Translates to: PGPVHHLNPWARGGSFVFAARRP*VASQTW
Trigger: CCAGGTTTGAGAAGCCACGCATGGACGACGGGCTGC...AAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCAGCTCCTCCTCCACGTaGATGGGCTGTTTACACCTC +
Preference number: 4 (lower is better)
Translates to: LPGPVHHLNPWARGGSFVSSSST*MGCLHL
Trigger: GAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCT...GACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp ACTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTACAGGCACTGGGAACTaGACATCAACAGCGGGCAAG +
Preference number: 4 (lower is better)
Translates to: TPPGASAPSESLGTWRQLTGTGN*TSTAGK
Trigger: CTTGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGT...AAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CTGCCTCCAGACCACCTGAAAACAAGGCTGGCGGGAGCAGAGATGGCTCGAGCCCAATGCGTGTGTCTGTaGAGTTTGGCAGATGCGGGG +
Preference number: 4 (lower is better)
Translates to: LPPDHLKTRLAGAEMARAQCVCL*SLADAG
Trigger: CCCCGCATCTGCCAAACTGCACAGACACACGCATTG...GGCTCGAGCCATCTCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GGGGCTGAAAGCCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAAACCTGGGAGAACAGGTaGAGCCCGGGAAGAGGACCT +
Preference number: 4 (lower is better)
Translates to: GAESQLLLHVHGLFTPPKTWENR*SPGRGP
Trigger: AGGTCCTCTTCCCGGGCTCCACCTGTTCTCCCAGGT...TTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGGCTTTCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTTCATCTGCACGATCTTaGGGGGCTCTGCGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: PGPVHHLNPWARGGSFVFSSARS*GALRLP
Trigger: CGGCAGACGCAGAGCCCCCCAAGATCGTGCAGATGA...AAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GTGAGATCAGACCCACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGGGCTCACACAGGCACTaGGAACTGCACATCAACAGC +
Preference number: 4 (lower is better)
Translates to: VRSDPPGRPASSTVQLKGGSHRH*ELHINS
Trigger: GCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCC...CCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTGGGTCTGATCTCAC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTGCACAGCTTTGTCTTTGGCTaGGTGCACCCCAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PAPPPRAWAVYTSQTPLHSFVFG*VHPSLA
Trigger: GGCCAGGCTGGGGTGCACCCAGCCAAAGACAAAGCT...GTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp TGTGTCACCAATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTAGGCAGCTTTGTCTTTaGCTGGGTGCACCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: CVTNGMRAGPAPSLGRCCRQLCL*LGAPQP
Trigger: AGGCTGGGGTGCACCCAGCCAAAGACAAAGCTGCCT...ACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATTGGTGACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCAACAAGAGTGCACGCTaGAGGCCACAAGCGGCCTTA +
Preference number: 4 (lower is better)
Translates to: LPGPVHHLNPWARGGSFVNKSAR*RPQAAL
Trigger: TAAGGCCGCTTGTGGCCTCCAGCGTGCACTCTTGTT...GACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp CCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTCCCTGGAGCTGTACCTaGGATCCAAGCTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: PGPVHHLNPWARGGSFVFPWSCT*DPSCHL
Trigger: CAGATGGCAGCTTGGATCTCAGGTACAGCTCCAGGG...AAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTGTGCCTCCAGGACCTTaGGGCAGACAGCACAGAACT +
Preference number: 4 (lower is better)
Translates to: PGPVHHLNPWARGGSFVFVPPGP*GRQHRT
Trigger: AGTTCTGTGCTGTCTGCCGCAAGGTCCTGGAGGCAC...AAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp GGGGCTGAAAGCCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACAGTCTGGGTGGAGGTaGAGCTCACACACTTCGCAG +
Preference number: 4 (lower is better)
Translates to: GAESQLLLHVHGLFTPPKQSGWR*SSHTSQ
Trigger: CTGCGAAGTGTGTGAGCTGCACCTCCACCCAGACTG...TTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGGCTTTCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp AGACCACCTGAAAACAAGGCTGGCGGGAGCAGAGATGGCTCGAGCCCTTGGGCTTACATCCCTGCTCTCTaGCACGTAGAACCGCGTCTG +
Preference number: 4 (lower is better)
Translates to: RPPENKAGGSRDGSSPWAYIPAL*HVEPRL
Trigger: CAGACGCGGTTCTACGTGGCAGAGAGCAGGGATGTA...AGCCCAAGGGCTCGAGCCATCTCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTCCTCATGCAGCAGGCTaGTGTACTCCTCGGGAGACA +
Preference number: 4 (lower is better)
Translates to: PGPVHHLNPWARGGSFVFPHAAG*CTPRET
Trigger: TGTCTCCCGAGGAGTACAGCAGCCTGCTGCATGAGG...AAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTGCACTGTCGTTCTCTGCACTaGCAGCCTCGTGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: PAPPPRAWAVYTSQTPLHCRSLH*QPRGHP
Trigger: TGGATGCCCACGAGGCTGGCAGTGCAGAGAACGACA...GTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTTGTCGTTCTCTGCACTaGCAGCCTCGTGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: PGPVHHLNPWARGGSFVFCRSLH*QPRGHP
Trigger: TGGATGCCCACGAGGCTGGCAGTGCAGAGAACGACA...AAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGCTCAGTGGGGAGACCGCGTCGATGCCAATaGCACAGTAGTTACTCATCT +
Preference number: 4 (lower is better)
Translates to: HLDGLHPALSSSRGSVGRPRRCQ*HSSYSS
Trigger: AGATGAGTAACTACTGTGGCATTGGCATCGACGCGG...TCTCCCCACTGAGCCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTGCCTTCCTCAGCATGTaGACCTTAGGGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PGPVHHLNPWARGGSFVFAFLSM*TLGPAA
Trigger: AGCTGCTGGCCCTAAGGTGCACATGCTGAGGAAGGC...AAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTTGCACCGCCATGCCCTaGTTTTGGTCCCTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: PGPVHHLNPWARGGSFVFCTAMP*FWSLLG
Trigger: ACCCAGAAGGGACCAAAAGCAGGGCATGGCGGTGCA...AAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp AGACCACCTGAAAACAAGGCTGGCGGGAGCAGAGATGGCTCGAGCCCTTGGGCTAGCTCCTCCTCCACGTaGATGGGCTGTTTACACCTC +
Preference number: 4 (lower is better)
Translates to: RPPENKAGGSRDGSSPWASSSST*MGCLHL
Trigger: GAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCT...AGCCCAAGGGCTCGAGCCATCTCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGCTCAGTGGGGAGACAAGCGGCCTTACAATaGGTGTGTCTGTGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: HLDGLHPALSSSRGSVGRQAALQ*VCLCSL
Trigger: CAAACTGCACAGACACACGCATTGTAAGGCCGCTTG...TCTCCCCACTGAGCCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GGGGCTGAAAGCCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAAAACATGTGTCACCAATaGGATGAGGGCGGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: GAESQLLLHVHGLFTPPKNMCHQ*DEGGSR
Trigger: GCGGGACCCGCCCTCATCCCATTGGTGACACATGTT...TTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGGCTTTCAGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTGCACGCTTTTGGTCCCTTCTaGGTGCTAAGTGCCCCACCC +
Preference number: 4 (lower is better)
Translates to: PAPPPRAWAVYTSQTPLHAFGPF*VLSAPP
Trigger: GGGTGGGGCACTTAGCACCCAGAAGGGACCAAAAGC...GTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp TGTGGACGTGGAGCTGCCTCCAGACCACCTGAAAACAAGGCTGGCGGGAGCAGACCTCCTCCACGTGCATaGGCTGTTTACACCTCCCAA +
Preference number: 4 (lower is better)
Translates to: CGRGAASRPPENKAGGSRPPPRA*AVYTSQ
Trigger: TTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGG...TCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCAGCTCCACGTCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGAATCCTTGGGCACGTaGAGGCAGCTTTGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LLPGPVHHLNPWARGGSFESLGT*RQLCLW
Trigger: CCAAAGACAAAGCTGCCTCCACGTGCCCAAGGATTC...AAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp GTGAGATCAGACCCACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGCCGCGTCGATGCCAATaGCACAGTAGTTACTCATCT +
Preference number: 4 (lower is better)
Translates to: VRSDPPGRPASSTVQLKGPRRCQ*HSSYSS
Trigger: AGATGAGTAACTACTGTGGCATTGGCATCGACGCGG...CCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTGGGTCTGATCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTGCACCGCCTCAGCTCCGCGTCGATaGCAATGCCACAGTAGTTAC +
Preference number: 4 (lower is better)
Translates to: LLLHVHGLFTPPKLLCTASAPRR*QCHSSY
Trigger: GTAACTACTGTGGCATTGGCATCGACGCGGAGCTGA...GGCGGTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CTGCCTCCAGACCACCTGAAAACAAGGCTGGCGGGAGCAGAGATGGCTCGAGCCCAAGCGGCCTTACAATaGGTGTGTCTGTGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: LPPDHLKTRLAGAEMARAQAALQ*VCLCSL
Trigger: CAAACTGCACAGACACACGCATTGTAAGGCCGCTTG...GGCTCGAGCCATCTCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GGGGCTGAAAGCCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAAGCCATGCCCTGCTTTTaGTCCCTTCTGGGTGCTAAG +
Preference number: 4 (lower is better)
Translates to: GAESQLLLHVHGLFTPPKAMPCF*SLLGAK
Trigger: CTTAGCACCCAGAAGGGACCAAAAGCAGGGCATGGC...TTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGGCTTTCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp GGGGCTGAAAGCCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAAGAATCCTTGGGCACGTaGAGGCAGCTTTGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GAESQLLLHVHGLFTPPKESLGT*RQLCLW
Trigger: CCAAAGACAAAGCTGCCTCCACGTGCCCAAGGATTC...TTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGGCTTTCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTCACCATCTGAATCCTTaGGCACGTGGAGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: PGPVHHLNPWARGGSFVFHHLNP*ARGGSF
Trigger: AAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTG...AAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CCA 90 bp CTGAGCAGATGTCGGCTCACACAGGCACTGGGAACTGCACATCAACAGCGGGCACACCATCTGAATCCTTaGGCACGTGGAGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: LSRCRLTQALGTAHQQRAHHLNP*ARGGSF
Trigger: AAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTG...TGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCCGACATCTGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp GTGAGATCAGACCCACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGTTCAGGCACTTCTCATaGGACATGAAATTGCAGACG +
Preference number: 4 (lower is better)
Translates to: VRSDPPGRPASSTVQLKGFRHFS*DMKLQT
Trigger: CGTCTGCAATTTCATGTCTCATGAGAAGTGCCTGAA...CCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTGGGTCTGATCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp AGACCACCTGAAAACAAGGCTGGCGGGAGCAGAGATGGCTCGAGCCCTTGGGCTTACACACCCTTGTTGTaGAGCCTGCTTGTGAACTTG +
Preference number: 4 (lower is better)
Translates to: RPPENKAGGSRDGSSPWAYTPLL*SLLVNL
Trigger: CAAGTTCACAAGCAGGCTGCACAACAAGGGTGTGTA...AGCCCAAGGGCTCGAGCCATCTCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR TCA 90 bp TGTGTCACCAATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTACTTCTCATGAGACATaGAATTGCAGACGTCGCACA +
Preference number: 4 (lower is better)
Translates to: CVTNGMRAGPAPSLGRCCTSHET*NCRRRT
Trigger: TGTGCGACGTCTGCAATTTCATGTCTCATGAGAAGT...ACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATTGGTGACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR GCA 90 bp CCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTGCACTACACACCCTTGTTGTaGAGCCTGCTTGTGAACTTG +
Preference number: 4 (lower is better)
Translates to: PAPPPRAWAVYTSQTPLHYTPLL*SLLVNL
Trigger: CAAGTTCACAAGCAGGCTGCACAACAAGGGTGTGTA...GTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS GCA 90 bp CGCAGCGCACGCCGGCCAGCACGTCAGAGGAGCCGCACGTCTTCCTaGAGACCTCGCAGCGCGCTCCCGAGGGCAGGTTCCCCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: RSARRPARQRSRTSS*RPRSALPRAGSPPA
Trigger: GGCGGGAGGGGAACCTGCCCTCGGGAGCGCGCTGCGAGGTCTGCAGGAAGACGTGCGGCTCCTCTGACGTGCTGGCCGGCGTGCGCTGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000510286.1
CDS TCA 90 bp CGCCCGGCTCCGCGGCCTCCACGATGCGGAAGCTCTGCGTCTTGCTaGAGCCGCCGGGCAGAAGGCGCACGCACGCGGGAGGCAGGACCA +
Preference number: 5 (lower is better)
Translates to: RPAPRPPRCGSSASC*SRRAEGARTREAGP
Trigger: TGGTCCTGCCTCCCGCGTGCGTGCGCCTTCTGCCCGGCGGCTTCAGCAAGACGCAGAGCTTCCGCATCGTGGAGGCCGCGGAGCCGGGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS CCA 90 bp ATCGTCCGCTGGACGTGCCTGCAGCCCATCGCCACCTCCACCAGCTaGAAGCTCTCGGGACTCTCGGCCTGGCGGCCGAGCAGCGGCAGG +
Preference number: 5 (lower is better)
Translates to: IVRWTCLQPIATSTS*KLSGLSAWRPSSGR
Trigger: CCTGCCGCTGCTCGGCCGCCAGGCCGAGAGTCCCGAGAGCTTCCAGCTGGTGGAGGTGGCGATGGGCTGCAGGCACGTCCAGCGGACGAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000502309.1
ENST00000509465.5
CDS-3UTR CAA 90 bp TGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACTCTGGTGAGCGGGCTCCATTTTaGGTCAGACTCCTCCCGGGG +
Preference number: 5 (lower is better)
Translates to: CPTLRAEGQTLGPGPHSGERAPF*VRLLPG
Trigger: CCCCGGGAGGAGTCTGACCAAAAATGGAGCCCGCTC...ACCAGAGTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp TGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACTCTGGTGAAAGCTCCGCAGGATaGGAGGCCCAGGCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: CPTLRAEGQTLGPGPHSGESSAG*EAQASC
Trigger: ACAGCTGGCCTGGGCCTCCAATCCTGCGGAGCTTTC...ACCAGAGTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS CCA 90 bp GATCGCTCTCAGGGGCAGGCGCAGCATCCGCCCGGGCATCCCTGGTaGTCCCGGCCCTCCTCGGCTTCTGCTTGGCCTTCCTCAGCATGT +
Preference number: 5 (lower is better)
Translates to: DRSQGQAQHPPGHPW*SRPSSASAWPSSAC
Trigger: ACATGCTGAGGAAGGCCAAGCAGAAGCCGAGGAGGGCCGGGACCACCAGGGATGCCCGGGCGGATGCTGCGCCTGCCCCTGAGAGCGATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000515182.1
CDS-3UTR CAA 90 bp GCTAAGTGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACCACGTGGAGGCAGCTTaGTCTTTGGCTGGGTGCACC +
Preference number: 5 (lower is better)
Translates to: AKCPTLRAEGQTLGPGPHHVEAA*SLAGCT
Trigger: GGTGCACCCAGCCAAAGACAAAGCTGCCTCCACGTG...GTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCACTTAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS GCA 90 bp GGAGCGCCGGTGCCTCCAGGACCTTGCGGCAGACAGCACAGAACTTaGGCTTGTGGAGCCCCCGGGGGCCGAAGCAGTGGGCTACAGGAA +
Preference number: 5 (lower is better)
Translates to: GAPVPPGPCGRQHRT*ACGAPGGRSSGLQE
Trigger: TTCCTGTAGCCCACTGCTTCGGCCCCCGGGGGCTCCACAAGCGCAAGTTCTGTGCTGTCTGCCGCAAGGTCCTGGAGGCACCGGCGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000510286.1
CDS GCA 90 bp GCAGCTCACACACTTCGCAGTGGAGCGCCGGTGCCTCCAGGACCTTaGGGCAGACAGCACAGAACTTGCGCTTGTGGAGCCCCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: AAHTLRSGAPVPPGP*GRQHRTCACGAPGG
Trigger: GCCCCCGGGGGCTCCACAAGCGCAAGTTCTGTGCTGTCTGCCGCAAGGTCCTGGAGGCACCGGCGCTCCACTGCGAAGTGTGTGAGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000510286.1
CDS GCA 90 bp GCATCCGCCCGGGCATCCCTGGTGGTCCCGGCCCTCCTCGGCTTCTaGTTGGCCTTCCTCAGCATGTGCACCTTAGGGCCAGCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: ASARASLVVPALLGF*LAFLSMCTLGPAAE
Trigger: CTCAGCTGCTGGCCCTAAGGTGCACATGCTGAGGAAGGCCAAGCAGAAGCCGAGGAGGGCCGGGACCACCAGGGATGCCCGGGCGGATGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000515182.1
CDS CCA 90 bp GGTGCCTCCAGGACCTTGCGGCAGACAGCACAGAACTTGCGCTTGTaGAGCCCCCGGGGGCCGAAGCAGTGGGCTACAGGAACCCGGACC +
Preference number: 5 (lower is better)
Translates to: GASRTLRQTAQNLRL*SPRGPKQWATGTRT
Trigger: GGTCCGGGTTCCTGTAGCCCACTGCTTCGGCCCCCGGGGGCTCCACAAGCGCAAGTTCTGTGCTGTCTGCCGCAAGGTCCTGGAGGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000510286.1
CDS CCA 90 bp GGGGGCTCTGCGTCTGCCGTGTCGTTCTCTGCACTGCCAGCCTCGTaGGCATCCAGCAGGATGGTCCAGCGGTCCATGAGCACGGCGTCG +
Preference number: 5 (lower is better)
Translates to: GGSASAVSFSALPAS*ASSRMVQRSMSTAS
Trigger: CGACGCCGTGCTCATGGACCGCTGGACCATCCTGCTGGATGCCCACGAGGCTGGCAGTGCAGAGAACGACACGGCAGACGCAGAGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS CCA 90 bp GACGCCCGTCACGCCCACAACCTCCAGCAGCCCGTCGTCCATGCGTaGCTTCTCAAACCTGGTGTCGCTGTCGGAGCCCCACAGGTCGGC +
Preference number: 5 (lower is better)
Translates to: DARHAHNLQQPVVHA*LLKPGVAVGAPQVG
Trigger: GCCGACCTGTGGGGCTCCGACAGCGACACCAGGTTTGAGAAGCCACGCATGGACGACGGGCTGCTGGAGGTTGTGGGCGTGACGGGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000515182.1
CDS-3UTR CAA 90 bp TGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACTCTGGTAGCCTGCTTGTGAACTaGCCAGGCTCCTCTTCCCGT +
Preference number: 5 (lower is better)
Translates to: CPTLRAEGQTLGPGPHSGSLLVN*PGSSSR
Trigger: ACGGGAAGAGGAGCCTGGCAAGTTCACAAGCAGGCT...ACCAGAGTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp GCTAAGTGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACCGCACGTACACACCCTaGTTGTGCAGCCTGCTTGTG +
Preference number: 5 (lower is better)
Translates to: AKCPTLRAEGQTLGPGPHRTYTP*LCSLLV
Trigger: CACAAGCAGGCTGCACAACAAGGGTGTGTACGTGCG...GTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCACTTAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS GCA 90 bp GCACGACGCCCGTCACGCCCACAACCTCCAGCAGCCCGTCGTCCATaGGTGGCTTCTCAAACCTGGTGTCGCTGTCGGAGCCCCACAGGT +
Preference number: 5 (lower is better)
Translates to: ARRPSRPQPPAARRP*VASQTWCRCRSPTG
Trigger: ACCTGTGGGGCTCCGACAGCGACACCAGGTTTGAGAAGCCACGCATGGACGACGGGCTGCTGGAGGTTGTGGGCGTGACGGGCGTCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000515182.1
CDS-3UTR CAA 90 bp CTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGCACAGAACTTGCGCTaGTGGAGCCCCCGGGGGCCG +
Preference number: 5 (lower is better)
Translates to: LLPGPVHHLNPWARGGSFAQNLR*WSPRGP
Trigger: CGGCCCCCGGGGGCTCCACAAGCGCAAGTTCTGTGC...AAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp GCTAAGTGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACCAACACTACCGCGCCTaGGGAGGAGTAGATGTGACT +
Preference number: 5 (lower is better)
Translates to: AKCPTLRAEGQTLGPGPHQHYRA*GGVDVT
Trigger: AGTCACATCTACTCCTCCCAAGGCGCGGTAGTGTTG...GTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCACTTAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273814.8
CDS TCA 90 bp CACTGCCAGCCTCGTGGGCATCCAGCAGGATGGTCCAGCGGTCCATaGGCACGGCGTCGGCCTCGTCCACAGACAGCAGTACGGAGAACG +
Preference number: 5 (lower is better)
Translates to: HCQPRGHPAGWSSGP*ARRRPRPQTAVRRT
Trigger: CGTTCTCCGTACTGCTGTCTGTGGACGAGGCCGACGCCGTGCTCATGGACCGCTGGACCATCCTGCTGGATGCCCACGAGGCTGGCAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS GCA 90 bp GAGGCAGGCCGCCAACAAACAGGGAGACGTGCGGGGCTACATCCCTaGTCTCTGCCACGTAGAACCGCGTCTGGCTCACCTGCCGCACAG +
Preference number: 5 (lower is better)
Translates to: EAGRQQTGRRAGLHP*SLPRRTASGSPAAQ
Trigger: CTGTGCGGCAGGTGAGCCAGACGCGGTTCTACGTGGCAGAGAGCAGGGATGTAGCCCCGCACGTCTCCCTGTTTGTTGGCGGCCTGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp CACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGCTCAGTGGGGAGACGGAAGCTCTGCGTCTaGCTGAAGCCGCCGGGCAGA +
Preference number: 5 (lower is better)
Translates to: HLDGLHPALSSSRGSVGRRKLCV*LKPPGR
Trigger: TCTGCCCGGCGGCTTCAGCAAGACGCAGAGCTTCCG...TCTCCCCACTGAGCCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp TGCCCCACCCTGAGGGCCGAGGGGCAGACACTCGGGCCCGGCCCACACTCTGGTAAAGATCTTCAGCGTTaGCTTCCCGGACTCCGGAGT +
Preference number: 5 (lower is better)
Translates to: CPTLRAEGQTLGPGPHSGKDLQR*LPGLRS
Trigger: ACTCCGGAGTCCGGGAAGCAAACGCTGAAGATCTTT...ACCAGAGTGTGGGCCGGGCCCGAGTGTCTGCCCCTCGGCCCTCAGGGTGGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp CACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGCTCAGTGGGGAGAGACACCACGGTGGCTTaGGTAGCCCCGGCCTCATGC +
Preference number: 5 (lower is better)
Translates to: HLDGLHPALSSSRGSVGRDTTVA*VAPASC
Trigger: GCATGAGGCCGGGGCTACCAAAGCCACCGTGGTGTC...TCTCCCCACTGAGCCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273814.8
CDS-3UTR CAA 90 bp AATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTGGTCAGGGCTGCACCGGGGTGGCCTaGAGGAGCGTGACTCGGAAG +
Preference number: 5 (lower is better)
Translates to: NGMRAGPAPSLGRCCGQGCTGVA*RSVTRK
Trigger: CTTCCGAGTCACGCTCCTCAAGGCCACCCCGGTGCA...GCCCTGACCACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp AATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTGGTCAGGGCTGGCAGAAGGTGGGCTaGGTGAGCGTCACCTTCCGG +
Preference number: 5 (lower is better)
Translates to: NGMRAGPAPSLGRCCGQGWQKVG*VSVTFR
Trigger: CCGGAAGGTGACGCTCACCAAGCCCACCTTCTGCCA...GCCCTGACCACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp GGGGCTGAAAGCCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAAGCACAGAACTTGCGCTaGTGGAGCCCCCGGGGGCCG +
Preference number: 5 (lower is better)
Translates to: GAESQLLLHVHGLFTPPKAQNLR*WSPRGP
Trigger: CGGCCCCCGGGGGCTCCACAAGCGCAAGTTCTGTGC...TTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGGCTTTCAGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp CTGCCTCCAGACCACCTGAAAACAAGGCTGGCGGGAGCAGAGATGGCTCGAGCCAGCAGGTCTCGGCCCTaGAGGCCTCCACTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: LPPDHLKTRLAGAEMARASRSRP*RPPLLG
Trigger: CCCCAAGAGTGGAGGCCTCAAGGGCCGAGACCTGCT...GGCTCGAGCCATCTCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp GCCATGCCCTGCTTTTGGTCCCTTCTGGGTGCTAAGTGCCCCACCCTGAGGGCCGAAAGCTCCGCAGGATaGGAGGCCCAGGCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: AMPCFWSLLGAKCPTLRAESSAG*EAQASC
Trigger: ACAGCTGGCCTGGGCCTCCAATCCTGCGGAGCTTTC...GGCCCTCAGGGTGGGGCACTTAGCACCCAGAAGGGACCAAAAGCAGGGCATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS GCA 90 bp GCCGCCAACAAACAGGGAGACGTGCGGGGCTACATCCCTGCTCTCTaGCACGTAGAACCGCGTCTGGCTCACCTGCCGCACAGACATCTG +
Preference number: 5 (lower is better)
Translates to: AANKQGDVRGYIPAL*HVEPRLAHLPHRHL
Trigger: CAGATGTCTGTGCGGCAGGTGAGCCAGACGCGGTTCTACGTGGCAGAGAGCAGGGATGTAGCCCCGCACGTCTCCCTGTTTGTTGGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS CCA 90 bp ACCTCCTCGGCACCGGCCAGGCGGGACACCGTGACGAGGCGGAACTaGCTTCTTCTCACCGCGTCGTCGCCATCAAAGATCTTCAGCGTT +
Preference number: 5 (lower is better)
Translates to: TSSAPARRDTVTRRN*LLLTASSPSKIFSV
Trigger: AACGCTGAAGATCTTTGATGGCGACGACGCGGTGAGAAGAAGCCAGTTCCGCCTCGTCACGGTGTCCCGCCTGGCCGGTGCCGAGGAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp CTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCTGCACCGCCCGGAAGCTCTGCGTCTaGCTGAAGCCGCCGGGCAGA +
Preference number: 5 (lower is better)
Translates to: LLLHVHGLFTPPKLLCTARKLCV*LKPPGR
Trigger: TCTGCCCGGCGGCTTCAGCAAGACGCAGAGCTTCCG...GGCGGTGCAGAGGAGTTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp TGTGGACGTGGAGCTGCCTCCAGACCACCTGAAAACAAGGCTGGCGGGAGCAGATGCACCGGGGTGGCCTaGAGGAGCGTGACTCGGAAG +
Preference number: 5 (lower is better)
Translates to: CGRGAASRPPENKAGGSRCTGVA*RSVTRK
Trigger: CTTCCGAGTCACGCTCCTCAAGGCCACCCCGGTGCA...TCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCAGCTCCACGTCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp ACTAGGAAAGGGCCACCAGGTCCAGCTGGGCACTGCCTGCCCCTGGAGCTGTACCACGTGGAGGCAGCTTaGTCTTTGGCTGGGTGCACC +
Preference number: 5 (lower is better)
Translates to: TRKGPPGPAGHCLPLELYHVEAA*SLAGCT
Trigger: GGTGCACCCAGCCAAAGACAAAGCTGCCTCCACGTG...GTACAGCTCCAGGGGCAGGCAGTGCCCAGCTGGACCTGGTGGCCCTTTCCTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp GTGAGATCAGACCCACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGAACACTACCGCGCCTTaGGTAGCCCCGGCCTCATGC +
Preference number: 5 (lower is better)
Translates to: VRSDPPGRPASSTVQLKGNTTAP*VAPASC
Trigger: GCATGAGGCCGGGGCTACCAAAGGCGCGGTAGTGTT...CCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTGGGTCTGATCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509465.5
CDS TCA 90 bp TGCCGCTCCACCTGCAGCCGGATCTGCTTGTGCAGGCTCCGAGAGTaGCTGATCTTCTGCAGCCCCACCCGCACGTACACACCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: CRSTCSRICLCRLRE*LIFCSPTRTYTPLL
Trigger: CAACAAGGGTGTGTACGTGCGGGTGGGGCTGCAGAAGATCAGTCACTCTCGGAGCCTGCACAAGCAGATCCGGCTGCAGGTGGAGCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp TGTGTCACCAATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTTCCCGGACTCCGGAGTaGCCTGTGTCTCTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: CVTNGMRAGPAPSLGRCCSRTPE*PVSLCL
Trigger: CAGGCAGAGAGACACAGGCAACTCCGGAGTCCGGGA...ACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATTGGTGACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp TGTGGACGTGGAGCTGCCTCCAGACCACCTGAAAACAAGGCTGGCGGGAGCAGATCCCGGACTCCGGAGTaGCCTGTGTCTCTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: CGRGAASRPPENKAGGSRSRTPE*PVSLCL
Trigger: CAGGCAGAGAGACACAGGCAACTCCGGAGTCCGGGA...TCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCAGCTCCACGTCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp CTGAGCAGATGTCGGCTCACACAGGCACTGGGAACTGCACATCAACAGCGGGCAAGCAGGTCTCGGCCCTaGAGGCCTCCACTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: LSRCRLTQALGTAHQQRASRSRP*RPPLLG
Trigger: CCCCAAGAGTGGAGGCCTCAAGGGCCGAGACCTGCT...TGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCCGACATCTGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp ACTAGGAAAGGGCCACCAGGTCCAGCTGGGCACTGCCTGCCCCTGGAGCTGTACAGCCTGCTTGTGAACTaGCCAGGCTCCTCTTCCCGT +
Preference number: 5 (lower is better)
Translates to: TRKGPPGPAGHCLPLELYSLLVN*PGSSSR
Trigger: ACGGGAAGAGGAGCCTGGCAAGTTCACAAGCAGGCT...GTACAGCTCCAGGGGCAGGCAGTGCCCAGCTGGACCTGGTGGCCCTTTCCTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp GCGTGGAAAGTGCTAGCGTGGGGTCTGGGGCTGAAAGCCAGCTCCTCCTCCACGCGCACGTACACACCCTaGTTGTGCAGCCTGCTTGTG +
Preference number: 5 (lower is better)
Translates to: AWKVLAWGLGLKASSSSTRTYTP*LCSLLV
Trigger: CACAAGCAGGCTGCACAACAAGGGTGTGTACGTGCG...CGTGGAGGAGGAGCTGGCTTTCAGCCCCAGACCCCACGCTAGCACTTTCCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp AATGGGATGAGGGCGGGTCCCGCTCCGTCACTGGGAAGATGCTGTGGTCAGGGCGCACCATCTGAATCCTaGGGCACGTGGAGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: NGMRAGPAPSLGRCCGQGAPSES*GTWRQL
Trigger: AAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGC...GCCCTGACCACAGCATCTTCCCAGTGACGGAGCGGGACCCGCCCTCATCCCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS TCA 90 bp GCTCCACCTGCAGCCGGATCTGCTTGTGCAGGCTCCGAGAGTGACTaGTCTTCTGCAGCCCCACCCGCACGTACACACCCTTGTTGTGCA +
Preference number: 5 (lower is better)
Translates to: APPAAGSACAGSESD*SSAAPPARTHPCCA
Trigger: TGCACAACAAGGGTGTGTACGTGCGGGTGGGGCTGCAGAAGATCAGTCACTCTCGGAGCCTGCACAAGCAGATCCGGCTGCAGGTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp CCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTTGTCTTTTGGCAGAAGGTGGGCTaGGTGAGCGTCACCTTCCGG +
Preference number: 5 (lower is better)
Translates to: PGPVHHLNPWARGGSFVFWQKVG*VSVTFR
Trigger: CCGGAAGGTGACGCTCACCAAGCCCACCTTCTGCCA...AAAGACAAAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp GGGGCTGAAAGCCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACAGACAGCACAGAACTaGCGCTTGTGGAGCCCCCGG +
Preference number: 5 (lower is better)
Translates to: GAESQLLLHVHGLFTPPKQTAQN*RLWSPR
Trigger: CCGGGGGCTCCACAAGCGCAAGTTCTGTGCTGTCTG...TTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGGCTTTCAGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp GGGCACGTGGAGGCAGCTTTGTCTTTGGCTGGGTGCACCCCAGCCTGGCCCAGAAAAGATCTTCAGCGTTaGCTTCCCGGACTCCGGAGT +
Preference number: 5 (lower is better)
Translates to: GHVEAALSLAGCTPAWPRKDLQR*LPGLRS
Trigger: ACTCCGGAGTCCGGGAAGCAAACGCTGAAGATCTTT...TCTGGGCCAGGCTGGGGTGCACCCAGCCAAAGACAAAGCTGCCTCCACGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp GCGTGGAAAGTGCTAGCGTGGGGTCTGGGGCTGAAAGCCAGCTCCTCCTCCACGCCCCAGCTGGGGATGTaGATGAAGATGAGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: AWKVLAWGLGLKASSSSTPQLGM*MKMRPS
Trigger: TGAAGGCCTCATCTTCATCAACATCCCCAGCTGGGG...CGTGGAGGAGGAGCTGGCTTTCAGCCCCAGACCCCACGCTAGCACTTTCCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp TGTGGACGTGGAGCTGCCTCCAGACCACCTGAAAACAAGGCTGGCGGGAGCAGACTCCTCGGCTTCTGCTaGGCCTTCCTCAGCATGTGC +
Preference number: 5 (lower is better)
Translates to: CGRGAASRPPENKAGGSRLLGFC*AFLSMC
Trigger: GCACATGCTGAGGAAGGCCAAGCAGAAGCCGAGGAG...TCTGCTCCCGCCAGCCTTGTTTTCAGGTGGTCTGGAGGCAGCTCCACGTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp CTGAGCAGATGTCGGCTCACACAGGCACTGGGAACTGCACATCAACAGCGGGCAGAGCGGGCTCCATTTTaGGTCAGACTCCTCCCGGGG +
Preference number: 5 (lower is better)
Translates to: LSRCRLTQALGTAHQQRAERAPF*VRLLPG
Trigger: CCCCGGGAGGAGTCTGACCAAAAATGGAGCCCGCTC...TGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCCGACATCTGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp ACTAGGAAAGGGCCACCAGGTCCAGCTGGGCACTGCCTGCCCCTGGAGCTGTACACGTACACACCCTTGTaGTGCAGCCTGCTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: TRKGPPGPAGHCLPLELYTYTPL*CSLLVN
Trigger: GTTCACAAGCAGGCTGCACAACAAGGGTGTGTACGT...GTACAGCTCCAGGGGCAGGCAGTGCCCAGCTGGACCTGGTGGCCCTTTCCTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp GTGAGATCAGACCCACCTGGACGGCCTGCATCCAGCACTGTCCAGCTCAAGGGGCCCCAGCTGGGGATGTaGATGAAGATGAGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: VRSDPPGRPASSTVQLKGPQLGM*MKMRPS
Trigger: TGAAGGCCTCATCTTCATCAACATCCCCAGCTGGGG...CCCCTTGAGCTGGACAGTGCTGGATGCAGGCCGTCCAGGTGGGTCTGATCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp GGGGCTGAAAGCCAGCTCCTCCTCCACGTGCATGGGCTGTTTACACCTCCCAAACTCCTCGGCTTCTGCTaGGCCTTCCTCAGCATGTGC +
Preference number: 5 (lower is better)
Translates to: GAESQLLLHVHGLFTPPKLLGFC*AFLSMC
Trigger: GCACATGCTGAGGAAGGCCAAGCAGAAGCCGAGGAG...TTTGGGAGGTGTAAACAGCCCATGCACGTGGAGGAGGAGCTGGCTTTCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS GCA 90 bp ATGTTGATGAAGATGAGGCCTTCAATACTGGGCAGCTCCACCTCCTaGCGCTCCACCTGCAGCCGGATCTGCTTGTGCAGGCTCCGAGAG +
Preference number: 5 (lower is better)
Translates to: MLMKMRPSILGSSTS*RSTCSRICLCRLRE
Trigger: CTCTCGGAGCCTGCACAAGCAGATCCGGCTGCAGGTGGAGCGGCAGGAGGTGGAGCTGCCCAGTATTGAAGGCCTCATCTTCATCAACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp ACTCCTCCCGGGGCCAGTGCACCATCTGAATCCTTGGGCACGTGGAGGCAGCTTACGTACACACCCTTGTaGTGCAGCCTGCTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: TPPGASAPSESLGTWRQLTYTPL*CSLLVN
Trigger: GTTCACAAGCAGGCTGCACAACAAGGGTGTGTACGT...AAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGCACTGGCCCCGGGAGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS-3UTR CAA 90 bp CTGAGCAGATGTCGGCTCACACAGGCACTGGGAACTGCACATCAACAGCGGGCAGCACCATCTGAATCCTaGGGCACGTGGAGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: LSRCRLTQALGTAHQQRAAPSES*GTWRQL
Trigger: AAGCTGCCTCCACGTGCCCAAGGATTCAGATGGTGC...TGCCCGCTGTTGATGTGCAGTTCCCAGTGCCTGTGTGAGCCGACATCTGCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS CAA 90 bp CCCTCGCCCGGCTCCGCGGCCTCCACGATGCGGAAGCTCTGCGTCTaGCTGAAGCCGCCGGGCAGAAGGCGCACGCACGCGGGAGGCAGG +
Preference number: 6 (lower is better)
Translates to: PSPGSAASTMRKLCV*LKPPGRRRTHAGGR
Trigger: CCTGCCTCCCGCGTGCGTGCGCCTTCTGCCCGGCGGCTTCAGCAAGACGCAGAGCTTCCGCATCGTGGAGGCCGCGGAGCCGGGCGAGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS CCA 72 bp CAGGGGCAGGCGCAGCATCCGCCCGGGCATCCCTGGTaGTCCCGGCCCTCCTCGGCTTCTGCTTGGCCTTCC +
Preference number: 6 (lower is better)
Translates to: QGQAQHPPGHPW*SRPSSASAWPS
Trigger: GGAAGGCCAAGCAGAAGCCGAGGAGGGCCGGGACCACCAGGGATGCCCGGGCGGATGCTGCGCCTGCCCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000515182.1
CDS TCA 72 bp CCGCGGCCTCCACGATGCGGAAGCTCTGCGTCTTGCTaGAGCCGCCGGGCAGAAGGCGCACGCACGCGGGAG +
Preference number: 6 (lower is better)
Translates to: PRPPRCGSSASC*SRRAEGARTRE
Trigger: CTCCCGCGTGCGTGCGCCTTCTGCCCGGCGGCTTCAGCAAGACGCAGAGCTTCCGCATCGTGGAGGCCGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS GCA 72 bp CGCCGGCCAGCACGTCAGAGGAGCCGCACGTCTTCCTaGAGACCTCGCAGCGCGCTCCCGAGGGCAGGTTCC +
Preference number: 6 (lower is better)
Translates to: RRPARQRSRTSS*RPRSALPRAGS
Trigger: GGAACCTGCCCTCGGGAGCGCGCTGCGAGGTCTGCAGGAAGACGTGCGGCTCCTCTGACGTGCTGGCCGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000510286.1
CDS GCA 72 bp TCGCCCGGCTCCGCGGCCTCCACGATGCGGAAGCTCTaGGTCTTGCTGAAGCCGCCGGGCAGAAGGCGCACG +
Preference number: 6 (lower is better)
Translates to: SPGSAASTMRKL*VLLKPPGRRRT
Trigger: CGTGCGCCTTCTGCCCGGCGGCTTCAGCAAGACGCAGAGCTTCCGCATCGTGGAGGCCGCGGAGCCGGGCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS CCA 72 bp CTTCCCGGACTCCGGAGTTGCCTGTGTCTCTCTGCCTaGACCCACGGCAGCGCTCCCGTCGGCGCCGTCGCC +
Preference number: 6 (lower is better)
Translates to: LPGLRSCLCLSA*THGSAPVGAVA
Trigger: GGCGACGGCGCCGACGGGAGCGCTGCCGTGGGTCCAGGCAGAGAGACACAGGCAACTCCGGAGTCCGGGAAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS CCA 72 bp CACAGCTCCAGGTGGCCAGGGTCCTCGGGGATGTGGTaGGCCCGCAGTGCGGCCTCCAGCACCTCCTCGGCA +
Preference number: 6 (lower is better)
Translates to: HSSRWPGSSGMW*ARSAASSTSSA
Trigger: TGCCGAGGAGGTGCTGGAGGCCGCACTGCGGGCCCACCACATCCCCGAGGACCCTGGCCACCTGGAGCTGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS CAA 72 bp GGCTCCGCGGCCTCCACGATGCGGAAGCTCTGCGTCTaGCTGAAGCCGCCGGGCAGAAGGCGCACGCACGCG +
Preference number: 6 (lower is better)
Translates to: GSAASTMRKLCV*LKPPGRRRTHA
Trigger: CGCGTGCGTGCGCCTTCTGCCCGGCGGCTTCAGCAAGACGCAGAGCTTCCGCATCGTGGAGGCCGCGGAGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS CCA 72 bp TGGACGTGCCTGCAGCCCATCGCCACCTCCACCAGCTaGAAGCTCTCGGGACTCTCGGCCTGGCGGCCGAGC +
Preference number: 6 (lower is better)
Translates to: WTCLQPIATSTS*KLSGLSAWRPS
Trigger: GCTCGGCCGCCAGGCCGAGAGTCCCGAGAGCTTCCAGCTGGTGGAGGTGGCGATGGGCTGCAGGCACGTCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000502309.1
ENST00000509465.5
CDS CAA 90 bp GCCGGTGCCTCCAGGACCTTGCGGCAGACAGCACAGAACTTGCGCTaGTGGAGCCCCCGGGGGCCGAAGCAGTGGGCTACAGGAACCCGG +
Preference number: 6 (lower is better)
Translates to: AGASRTLRQTAQNLR*WSPRGPKQWATGTR
Trigger: CCGGGTTCCTGTAGCCCACTGCTTCGGCCCCCGGGGGCTCCACAAGCGCAAGTTCTGTGCTGTCTGCCGCAAGGTCCTGGAGGCACCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000510286.1
CDS TCA 72 bp CCAGCACCTCCTCGGCACCGGCCAGGCGGGACACCGTaGCGAGGCGGAACTGGCTTCTTCTCACCGCGTCGT +
Preference number: 6 (lower is better)
Translates to: PAPPRHRPGGTP*RGGTGFFSPRR
Trigger: ACGACGCGGTGAGAAGAAGCCAGTTCCGCCTCGTCACGGTGTCCCGCCTGGCCGGTGCCGAGGAGGTGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS GCA 72 bp GCAGCGGCAGGACCTCCAGCACCACAGAGCGGGCCGTaGTCTTCGGGGTCACTCGCACGGACACGTAGGCCA +
Preference number: 6 (lower is better)
Translates to: AAAGPPAPQSGP*SSGSLARTRRP
Trigger: TGGCCTACGTGTCCGTGCGAGTGACCCCGAAGAGCACGGCCCGCTCTGTGGTGCTGGAGGTCCTGCCGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000502309.1
ENST00000509465.5
CDS CCA 72 bp CCAGCAGCCCGTCGTCCATGCGTGGCTTCTCAAACCTaGTGTCGCTGTCGGAGCCCCACAGGTCGGCCCCCG +
Preference number: 6 (lower is better)
Translates to: PAARRPCVASQT*CRCRSPTGRPP
Trigger: CGGGGGCCGACCTGTGGGGCTCCGACAGCGACACCAGGTTTGAGAAGCCACGCATGGACGACGGGCTGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000515182.1
CDS CAA 90 bp TGGAGCGCCGGTGCCTCCAGGACCTTGCGGCAGACAGCACAGAACTaGCGCTTGTGGAGCCCCCGGGGGCCGAAGCAGTGGGCTACAGGA +
Preference number: 6 (lower is better)
Translates to: WSAGASRTLRQTAQN*RLWSPRGPKQWATG
Trigger: TCCTGTAGCCCACTGCTTCGGCCCCCGGGGGCTCCACAAGCGCAAGTTCTGTGCTGTCTGCCGCAAGGTCCTGGAGGCACCGGCGCTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000510286.1
CDS GCA 72 bp TTTGCTTCCCGGACTCCGGAGTTGCCTGTGTCTCTCTaGCTGGACCCACGGCAGCGCTCCCGTCGGCGCCGT +
Preference number: 6 (lower is better)
Translates to: FASRTPELPVSL*LDPRQRSRRRR
Trigger: ACGGCGCCGACGGGAGCGCTGCCGTGGGTCCAGGCAGAGAGACACAGGCAACTCCGGAGTCCGGGAAGCAAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS CCA 72 bp AACTTGCGCTTGTGGAGCCCCCGGGGGCCGAAGCAGTaGGCTACAGGAACCCGGACCAGGCTGGGTGCCACA +
Preference number: 6 (lower is better)
Translates to: NLRLWSPRGPKQ*ATGTRTRLGAT
Trigger: TGTGGCACCCAGCCTGGTCCGGGTTCCTGTAGCCCACTGCTTCGGCCCCCGGGGGCTCCACAAGCGCAAGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000510286.1
CDS CCA 72 bp TCGCCACCACACACCAGCACCCGGAAGCAGGGCACCTaGGAGAACAGGTGGAGCCCGGGAAGAGGACCTCCG +
Preference number: 6 (lower is better)
Translates to: SPPHTSTRKQGT*ENRWSPGRGPP
Trigger: CGGAGGTCCTCTTCCCGGGCTCCACCTGTTCTCCCAGGTGCCCTGCTTCCGGGTGCTGGTGTGTGGTGGCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS CAA 72 bp GGTGCCTCCAGGACCTTGCGGCAGACAGCACAGAACTaGCGCTTGTGGAGCCCCCGGGGGCCGAAGCAGTGG +
Preference number: 6 (lower is better)
Translates to: GASRTLRQTAQN*RLWSPRGPKQW
Trigger: CCACTGCTTCGGCCCCCGGGGGCTCCACAAGCGCAAGTTCTGTGCTGTCTGCCGCAAGGTCCTGGAGGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000510286.1
CDS CAA 90 bp TGCAGCTCACACACTTCGCAGTGGAGCGCCGGTGCCTCCAGGACCTaGCGGCAGACAGCACAGAACTTGCGCTTGTGGAGCCCCCGGGGG +
Preference number: 6 (lower is better)
Translates to: CSSHTSQWSAGASRT*RQTAQNLRLWSPRG
Trigger: CCCCCGGGGGCTCCACAAGCGCAAGTTCTGTGCTGTCTGCCGCAAGGTCCTGGAGGCACCGGCGCTCCACTGCGAAGTGTGTGAGCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000510286.1
CDS GCA 72 bp ACGGACACCACGGTGGCTTTGGTAGCCCCGGCCTCATaGAGCAGGCTGCTGTACTCCTCGGGAGACAGGCCG +
Preference number: 6 (lower is better)
Translates to: TDTTVALVAPAS*SRLLYSSGDRP
Trigger: CGGCCTGTCTCCCGAGGAGTACAGCAGCCTGCTGCATGAGGCCGGGGCTACCAAAGCCACCGTGGTGTCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273814.8
CDS TCA 72 bp CCTCGTGGGCATCCAGCAGGATGGTCCAGCGGTCCATaGGCACGGCGTCGGCCTCGTCCACAGACAGCAGTA +
Preference number: 6 (lower is better)
Translates to: PRGHPAGWSSGP*ARRRPRPQTAV
Trigger: TACTGCTGTCTGTGGACGAGGCCGACGCCGTGCTCATGGACCGCTGGACCATCCTGCTGGATGCCCACGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS GCA 72 bp CCGTCACGCCCACAACCTCCAGCAGCCCGTCGTCCATaGGTGGCTTCTCAAACCTGGTGTCGCTGTCGGAGC +
Preference number: 6 (lower is better)
Translates to: PSRPQPPAARRP*VASQTWCRCRS
Trigger: GCTCCGACAGCGACACCAGGTTTGAGAAGCCACGCATGGACGACGGGCTGCTGGAGGTTGTGGGCGTGACGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000515182.1
CDS GCA 72 bp TCCAACACTACCGCGCCTTTGGTAGCCCCGGCCTCATaGAGCAGGCTGCTGTACTCCTCGGGAGACAGGCCG +
Preference number: 6 (lower is better)
Translates to: SNTTAPLVAPAS*SRLLYSSGDRP
Trigger: CGGCCTGTCTCCCGAGGAGTACAGCAGCCTGCTGCATGAGGCCGGGGCTACCAAAGGCGCGGTAGTGTTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509465.5
CDS CCA 72 bp AGGACCTTGCGGCAGACAGCACAGAACTTGCGCTTGTaGAGCCCCCGGGGGCCGAAGCAGTGGGCTACAGGA +
Preference number: 6 (lower is better)
Translates to: RTLRQTAQNLRL*SPRGPKQWATG
Trigger: TCCTGTAGCCCACTGCTTCGGCCCCCGGGGGCTCCACAAGCGCAAGTTCTGTGCTGTCTGCCGCAAGGTCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000510286.1
CDS CCA 72 bp GCACCGGCCAGGCGGGACACCGTGACGAGGCGGAACTaGCTTCTTCTCACCGCGTCGTCGCCATCAAAGATC +
Preference number: 6 (lower is better)
Translates to: APARRDTVTRRN*LLLTASSPSKI
Trigger: GATCTTTGATGGCGACGACGCGGTGAGAAGAAGCCAGTTCCGCCTCGTCACGGTGTCCCGCCTGGCCGGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS CCA 72 bp CACGCCCACAACCTCCAGCAGCCCGTCGTCCATGCGTaGCTTCTCAAACCTGGTGTCGCTGTCGGAGCCCCA +
Preference number: 6 (lower is better)
Translates to: HAHNLQQPVVHA*LLKPGVAVGAP
Trigger: TGGGGCTCCGACAGCGACACCAGGTTTGAGAAGCCACGCATGGACGACGGGCTGCTGGAGGTTGTGGGCGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000515182.1
CDS CAA 72 bp TCCAGGACCTTGCGGCAGACAGCACAGAACTTGCGCTaGTGGAGCCCCCGGGGGCCGAAGCAGTGGGCTACA +
Preference number: 6 (lower is better)
Translates to: SRTLRQTAQNLR*WSPRGPKQWAT
Trigger: TGTAGCCCACTGCTTCGGCCCCCGGGGGCTCCACAAGCGCAAGTTCTGTGCTGTCTGCCGCAAGGTCCTGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000510286.1
CDS GCA 72 bp GAAGCAGTGGGCTACAGGAACCCGGACCAGGCTGGGTaGCACACTCGTGCACGGGATCCTCACGTGCTTCAG +
Preference number: 6 (lower is better)
Translates to: EAVGYRNPDQAG*HTRARDPHVLQ
Trigger: CTGAAGCACGTGAGGATCCCGTGCACGAGTGTGGCACCCAGCCTGGTCCGGGTTCCTGTAGCCCACTGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000510286.1
CDS GCA 72 bp AAACAGGGAGACGTGCGGGGCTACATCCCTGCTCTCTaGCACGTAGAACCGCGTCTGGCTCACCTGCCGCAC +
Preference number: 6 (lower is better)
Translates to: KQGDVRGYIPAL*HVEPRLAHLPH
Trigger: GTGCGGCAGGTGAGCCAGACGCGGTTCTACGTGGCAGAGAGCAGGGATGTAGCCCCGCACGTCTCCCTGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS CCA 72 bp CTGGCGGCAGTCACTGCAGGCGAAGGGCACACAGTCTaGGTGGAGGTGCAGCTCACACACTTCGCAGTGGAG +
Preference number: 6 (lower is better)
Translates to: LAAVTAGEGHTV*VEVQLTHFAVE
Trigger: CTCCACTGCGAAGTGTGTGAGCTGCACCTCCACCCAGACTGTGTGCCCTTCGCCTGCAGTGACTGCCGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000510286.1
CDS CAA 72 bp CACACTTCGCAGTGGAGCGCCGGTGCCTCCAGGACCTaGCGGCAGACAGCACAGAACTTGCGCTTGTGGAGC +
Preference number: 6 (lower is better)
Translates to: HTSQWSAGASRT*RQTAQNLRLWS
Trigger: GCTCCACAAGCGCAAGTTCTGTGCTGTCTGCCGCAAGGTCCTGGAGGCACCGGCGCTCCACTGCGAAGTGTG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000510286.1
CDS GCA 72 bp GAGGTGCAGCTCACACACTTCGCAGTGGAGCGCCGGTaGCTCCAGGACCTTGCGGCAGACAGCACAGAACTT +
Preference number: 6 (lower is better)
Translates to: EVQLTHFAVERR*LQDLAADSTEL
Trigger: AAGTTCTGTGCTGTCTGCCGCAAGGTCCTGGAGGCACCGGCGCTCCACTGCGAAGTGTGTGAGCTGCACCTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000510286.1
CDS GCA 72 bp CGCCAACAAACAGGGAGACGTGCGGGGCTACATCCCTaGTCTCTGCCACGTAGAACCGCGTCTGGCTCACCT +
Preference number: 6 (lower is better)
Translates to: RQQTGRRAGLHP*SLPRRTASGSP
Trigger: AGGTGAGCCAGACGCGGTTCTACGTGGCAGAGAGCAGGGATGTAGCCCCGCACGTCTCCCTGTTTGTTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS CCA 72 bp CTGCTTGTGAACTTGCCAGGCTCCTCTTCCCGTGCCTaGTGGAAGTCCAGGCTCAGCTCCGCGTCGATGCCA +
Preference number: 6 (lower is better)
Translates to: LLVNLPGSSSRA*WKSRLSSASMP
Trigger: TGGCATCGACGCGGAGCTGAGCCTGGACTTCCACCAGGCACGGGAAGAGGAGCCTGGCAAGTTCACAAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000515182.1
CDS TCA 72 bp ACCTGCAGCCGGATCTGCTTGTGCAGGCTCCGAGAGTaGCTGATCTTCTGCAGCCCCACCCGCACGTACACA +
Preference number: 6 (lower is better)
Translates to: TCSRICLCRLRE*LIFCSPTRTYT
Trigger: TGTGTACGTGCGGGTGGGGCTGCAGAAGATCAGTCACTCTCGGAGCCTGCACAAGCAGATCCGGCTGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS GCA 72 bp CTACAGGAACCCGGACCAGGCTGGGTGCCACACTCGTaGACGGGATCCTCACGTGCTTCAGGCACTTCTCAT +
Preference number: 6 (lower is better)
Translates to: LQEPGPGWVPHS*TGSSRASGTSH
Trigger: ATGAGAAGTGCCTGAAGCACGTGAGGATCCCGTGCACGAGTGTGGCACCCAGCCTGGTCCGGGTTCCTGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000510286.1
CDS CCA 72 bp CTTGTGAACTTGCCAGGCTCCTCTTCCCGTGCCTGGTaGAAGTCCAGGCTCAGCTCCGCGTCGATGCCAATG +
Preference number: 6 (lower is better)
Translates to: LVNLPGSSSRAW*KSRLSSASMPM
Trigger: CATTGGCATCGACGCGGAGCTGAGCCTGGACTTCCACCAGGCACGGGAAGAGGAGCCTGGCAAGTTCACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000515182.1
CDS GCA 72 bp AAAGATCTTCAGCGTTTGCTTCCCGGACTCCGGAGTTaGCTGTGTCTCTCTGCCTGGACCCACGGCAGCGCT +
Preference number: 6 (lower is better)
Translates to: KDLQRLLPGLRS*LCLSAWTHGSA
Trigger: AGCGCTGCCGTGGGTCCAGGCAGAGAGACACAGGCAACTCCGGAGTCCGGGAAGCAAACGCTGAAGATCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS GCA 72 bp GGTGGAAGTCCAGGCTCAGCTCCGCGTCGATGCCAATaGCACAGTAGTTACTCATCTGCACGATCTTGGGGG +
Preference number: 6 (lower is better)
Translates to: GGSPGSAPRRCQ*HSSYSSARSWG
Trigger: CCCCCAAGATCGTGCAGATGAGTAACTACTGTGGCATTGGCATCGACGCGGAGCTGAGCCTGGACTTCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS TCA 72 bp GGATCCTCACGTGCTTCAGGCACTTCTCATGAGACATaGAATTGCAGACGTCGCACAGGAAGCCGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: GSSRASGTSHET*NCRRRTGSRPA
Trigger: GGCTGGCCGGCTTCCTGTGCGACGTCTGCAATTTCATGTCTCATGAGAAGTGCCTGAAGCACGTGAGGATCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS GCA 72 bp GTGCCTGGTGGAAGTCCAGGCTCAGCTCCGCGTCGATaGCAATGCCACAGTAGTTACTCATCTGCACGATCT +
Preference number: 6 (lower is better)
Translates to: VPGGSPGSAPRR*QCHSSYSSARS
Trigger: AGATCGTGCAGATGAGTAACTACTGTGGCATTGGCATCGACGCGGAGCTGAGCCTGGACTTCCACCAGGCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273814.8
ENST00000509465.5
ENST00000515182.1
CDS TCA 72 bp GTGCACGGGATCCTCACGTGCTTCAGGCACTTCTCATaGGACATGAAATTGCAGACGTCGCACAGGAAGCCG +
Preference number: 6 (lower is better)
Translates to: VHGILTCFRHFS*DMKLQTSHRKP
Trigger: CGGCTTCCTGTGCGACGTCTGCAATTTCATGTCTCATGAGAAGTGCCTGAAGCACGTGAGGATCCCGTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273814.8
ENST00000509465.5
CDS TCA 72 bp AATTGCAGAATAGCACCAACGGGCGAAGCGTTCTTCTaGGCGCTTTCCGAGTCATCGGTCCTCAGAGCAGCC +
Preference number: 6 (lower is better)
Translates to: NCRIAPTGEAFF*ALSESSVLRAA
Trigger: GGCTGCTCTGAGGACCGATGACTCGGAAAGCGCTCAGAAGAACGCTTCGCCCGTTGGTGCTATTCTGCAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510286.1
CDS TCA 72 bp GTGCACGGGATCCTCACGTGCTTCAGGCACTTCTCATaGGACATGAAATTGCAGAATAGCACCAACGGGCGA +
Preference number: 6 (lower is better)
Translates to: VHGILTCFRHFS*DMKLQNSTNGR
Trigger: TCGCCCGTTGGTGCTATTCTGCAATTTCATGTCTCATGAGAAGTGCCTGAAGCACGTGAGGATCCCGTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510286.1
CDS TCA 72 bp GGATCCTCACGTGCTTCAGGCACTTCTCATGAGACATaGAATTGCAGAATAGCACCAACGGGCGAAGCGTTC +
Preference number: 6 (lower is better)
Translates to: GSSRASGTSHET*NCRIAPTGEAF
Trigger: GAACGCTTCGCCCGTTGGTGCTATTCTGCAATTTCATGTCTCATGAGAAGTGCCTGAAGCACGTGAGGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510286.1