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Pregenerated sensors for DGKK (Homo sapiens)

Ensembl gene IDs: ENSG00000274588

Ensembl transcript IDs: ENST00000611977.2

Found 414 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGATCAAGGCAGCAGGAGGGGAGCCTGTATGGTTGCCATGAGGGGTaGGTTCCAACCAATGAGCCCACCAGAGCACCACCTGGACATATG +
Preference number: 1 (lower is better)
Translates to: GSRQQEGSLYGCHEG*VPTNEPTRAPPGHM
Trigger: CATATGTCCAGGTGGTGCTCTGGTGGGCTCATTGGTTGGAACTCACCCCTCATGGCAACCATACAGGCTCCCCTCCTGCTGCCTTGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR TCA 90 bp CCAGCCATTGGACTGAATCAGGTAATTGAGCACGCTAAGTTTGTCTaGGAAGTAGGGAGAGGCCAGTTTTCTCTTGATAAGTGGGAAGGG +
Preference number: 1 (lower is better)
Translates to: PAIGLNQVIEHAKFV*EVGRGQFSLDKWEG
Trigger: CCCTTCCCACTTATCAAGAGAAAACTGGCCTCTCCCTACTTCTCAGACAAACTTAGCGTGCTCAATTACCTGATTCAGTCCAATGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR CCA 90 bp GCCCCAAATACTAGTGGTTTCAGTCAATATCATTCTGACTCAGAGTaGGAGGACAGGGTAGGTGAAAGGGAATCCACATGGCACAACAGA +
Preference number: 1 (lower is better)
Translates to: APNTSGFSQYHSDSE*EDRVGERESTWHNR
Trigger: TCTGTTGTGCCATGTGGATTCCCTTTCACCTACCCTGTCCTCCCACTCTGAGTCAGAATGATATTGACTGAAACCACTAGTATTTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR CCA 90 bp GGTGGCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTaGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACC +
Preference number: 1 (lower is better)
Translates to: GGSSNVSAFSSPLFF*PGIAYPTNSSESAT
Trigger: GGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR TCA 90 bp CAGGATCTAGTTCTCATTTTAATGAGCCAACTAGAAGAGATCTCCTaGAGGTGCAAGTTGCAGTTGGCAGGGATTCGGAGAGACACACAA +
Preference number: 1 (lower is better)
Translates to: QDLVLILMSQLEEIS*RCKLQLAGIRRDTQ
Trigger: TTGTGTGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACCTTCAGGAGATCTCTTCTAGTTGGCTCATTAAAATGAGAACTAGATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR GCA 90 bp ATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTaGTACCAAAGATACAACCAAACCCTAGAGCTTTGGGTCTTAATG +
Preference number: 1 (lower is better)
Translates to: ILLARNCLPNQFVRK*YQRYNQTLELWVLM
Trigger: CATTAAGACCCAAAGCTCTAGGGTTTGGTTGTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR CCA 90 bp GGTGTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTGCAAGTaGTTAACAAAGTCCTTAAAGGAGCTCACACTCCCAGAGCTAAGA +
Preference number: 1 (lower is better)
Translates to: GVWSHHPSNCINYCK*LTKSLKELTLPELR
Trigger: TCTTAGCTCTGGGAGTGTGAGCTCCTTTAAGGACTTTGTTAACCACTTGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR GCA 90 bp ATATTTGGTGTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTaGAAGTGGTTAACAAAGTCCTTAAAGGAGCTCACACTCCCAGAG +
Preference number: 1 (lower is better)
Translates to: IFGVWSHHPSNCINY*KWLTKSLKELTLPE
Trigger: CTCTGGGAGTGTGAGCTCCTTTAAGGACTTTGTTAACCACTTGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAACACCAAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR GCA 90 bp AAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTaGCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACAAC +
Preference number: 1 (lower is better)
Translates to: KCIGFFFSTILLARN*LPNQFVRKCYQRYN
Trigger: GTTGTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR TCA 90 bp AACCAAACCCTAGAGCTTTGGGTCTTAATGATGTCTGAACATAATTaGGATGGATATTTGGTGTTTGGTCCCACCACCCAAGCAATTGTA +
Preference number: 1 (lower is better)
Translates to: NQTLELWVLMMSEHN*DGYLVFGPTTQAIV
Trigger: TACAATTGCTTGGGTGGTGGGACCAAACACCAAATATCCATCTCAATTATGTTCAGACATCATTAAGACCCAAAGCTCTAGGGTTTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR GCA 90 bp ACAACAGAGCAACAGCAGCATCACTGTGCACAAAGACCTAATTATTaGAGCAAAGTAAGCACAAGAGATGGAGTCTTATTACAGTTTACT +
Preference number: 1 (lower is better)
Translates to: TTEQQQHHCAQRPNY*SKVSTRDGVLLQFT
Trigger: AGTAAACTGTAATAAGACTCCATCTCTTGTGCTTACTTTGCTGCAATAATTAGGTCTTTGTGCACAGTGATGCTGCTGTTGCTCTGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR CCA 90 bp AAGGAGACCAGATTAAGTCCAGGAAAATGCATTAGTGAAAAGAATTaGAGGGTCTTTCTTGGTGGTGCTCATGTTTGTTCTGAAATGATT +
Preference number: 1 (lower is better)
Translates to: KETRLSPGKCISEKN*RVFLGGAHVCSEMI
Trigger: AATCATTTCAGAACAAACATGAGCACCACCAAGAAAGACCCTCCAATTCTTTTCACTAATGCATTTTCCTGGACTTAATCTGGTCTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR CCA 90 bp ATGCAATTCCACAAATCATATAGCCAAGCAAGGTCTCATATAGGATaGAATGGTGCTAATGGGTTTGGTTGCTTTGGTATTATTTTCCAC +
Preference number: 1 (lower is better)
Translates to: MQFHKSYSQARSHIG*NGANGFGCFGIIFH
Trigger: GTGGAAAATAATACCAAAGCAACCAAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTTGTGGAATTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR TCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACGGTTGCCATGAGGGGTaGGTTCCAACCAATGAGCCC +
Preference number: 2 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYGCHEG*VPTNEP
Trigger: GGGCTCATTGGTTGGAACTCACCCCTCATGGCAACC...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACAAGATCAGGCCAAGATaGAGCTTGTGGGGAAGGGCC +
Preference number: 2 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYKIRPR*SLWGRA
Trigger: GGCCCTTCCCCACAAGCTCCATCTTGGCCTGATCTT...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR TCA 90 bp GTGCAGGTGTCAATGCATGCAGCCATAGAGGAGCCAAGTCAGGCTGCAATAGTGAGAGGTGAACTCCCTTaGATCCTTTATAGATCCCAG +
Preference number: 2 (lower is better)
Translates to: VQVSMHAAIEEPSQAAIVRGELP*ILYRSQ
Trigger: CTGGGATCTATAAAGGATTCAAGGGAGTTCACCTCT...CACTATTGCAGCCTGACTTGGCTCCTCTATGGCTGCATGCATTGACACCTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACGGTGCAAGTTGCAGTTaGCAGGGATTCGGAGAGACA +
Preference number: 2 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYGASCS*QGFGET
Trigger: TGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACC...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR CAA 90 bp GCTCACACTCCCAGAGCTAAGACAACTCCCTTGAGGCATCACTTCTaGCTTTGTTTCCAAGTGAGCATATGCAAGAACAGGTGCTTGGCA +
Preference number: 2 (lower is better)
Translates to: AHTPRAKTTPLRHHF*LCFQVSICKNRCLA
Trigger: TGCCAAGCACCTGTTCTTGCATATGCTCACTTGGAAACAAAGCAAGAAGTGATGCCTCAAGGGAGTTGTCTTAGCTCTGGGAGTGTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR GCA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCACTCCGTGGAGGCATaGAGGCTAGGATCAAGGCAG +
Preference number: 2 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELHSVEA*RLGSRQ
Trigger: CTGCCTTGATCCTAGCCTGCATGCCTCCACGGAGTG...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR GCA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTGCAGGTGTCAATGCATaGAGCCATAGAGGAGCCAAG +
Preference number: 2 (lower is better)
Translates to: RLFLLHYSSGQELPTQPIAGVNA*SHRGAK
Trigger: CTTGGCTCCTCTATGGCTGCATGCATTGACACCTGC...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CCA 90 bp GATGGATATTTGGTGTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTGCATCACCCCTGCGGAGGTaGAGCACAGGTGGCTGGTTT +
Preference number: 2 (lower is better)
Translates to: DGYLVFGPTTQAIVLITASPLRR*STGGWF
Trigger: AAACCAGCCACCTGTGCTCCACCTCCGCAGGGGTGA...TGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAACACCAAATATCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR TCA 90 bp TTTTATTGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGGACAGATAGAGCAACCTGTATGGTTGCCATaGGGGGTGAGTTCCAACCAA +
Preference number: 2 (lower is better)
Translates to: FYWGRAQLLMKSLGQIEQPVWLP*GVSSNQ
Trigger: TTGGTTGGAACTCACCCCTCATGGCAACCATACAGG...TTGCTCTATCTGTCCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR TCA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTGTGGAGTTCCAGAGTTaGGAACCAGTGCTTGGAATC +
Preference number: 2 (lower is better)
Translates to: RLFLLHYSSGQELPTQPIVEFQS*EPVLGI
Trigger: GATTCCAAGCACTGGTTCTCAACTCTGGAACTCCAC...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR TCA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTATCAACTGTGCTCCATaGGCTGACTCTAGCCCCAAA +
Preference number: 2 (lower is better)
Translates to: RLFLLHYSSGQELPTQPIINCAP*ADSSPK
Trigger: TTTGGGGCTAGAGTCAGCTCATGGAGCACAGTTGAT...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CCA 90 bp ACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCATTCTGACTCAGAGTaGGAGGACAGGGTAGGTGAA +
Preference number: 2 (lower is better)
Translates to: TILLARNCLPNQFVRKCYHSDSE*EDRVGE
Trigger: TTCACCTACCCTGTCCTCCCACTCTGAGTCAGAATG...GTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CCA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGGGTGGCTGGTTTAAGTaGGTTAGGCTGGTGGAGTTC +
Preference number: 2 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELGGWFK*VRLVEF
Trigger: GAACTCCACCAGCCTAACCCACTTAAACCAGCCACC...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR CAA 90 bp ATGCATGCAGCCATAGAGGAGCCAAGTCAGGCTGCAATAGTGAGCTaGCTGATTTCATCTAATACCTCCTCCTGGGAAGAAAGACTAATA +
Preference number: 2 (lower is better)
Translates to: MHAAIEEPSQAAIVS*LISSNTSSWEERLI
Trigger: TATTAGTCTTTCTTCCCAGGAGGAGGTATTAGATGAAATCAGCAAGCTCACTATTGCAGCCTGACTTGGCTCCTCTATGGCTGCATGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR CAA 90 bp GCCTTTCTGGAGAAGGGGACCCATAACTGTTTACCTCCTATAGTATaGACACCAGAAGCAGTTGGTGGCAGTTCAAATGTATCGGCTTTT +
Preference number: 2 (lower is better)
Translates to: AFLEKGTHNCLPPIV*TPEAVGGSSNVSAF
Trigger: AAAAGCCGATACATTTGAACTGCCACCAACTGCTTCTGGTGTCAATACTATAGGAGGTAAACAGTTATGGGTCCCCTTCTCCAGAAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR TCA 90 bp GATGGATATTTGGTGTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTGCAGTGAAGATGCAAGGCTaGCCAGAGAGAACCTCTCTG +
Preference number: 2 (lower is better)
Translates to: DGYLVFGPTTQAIVLITAVKMQG*PERTSL
Trigger: CAGAGAGGTTCTCTCTGGTCAGCCTTGCATCTTCAC...TGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAACACCAAATATCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR TCA 90 bp ACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACAATTGTGCACCTCAATaGACCAGCCATTGGACTGAA +
Preference number: 2 (lower is better)
Translates to: TILLARNCLPNQFVRKCYNCAPQ*TSHWTE
Trigger: TTCAGTCCAATGGCTGGTTCATTGAGGTGCACAATT...GTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CCA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGAGTGGGTTAGGCTGGTaGAGTTCCAGAGTTGAGAAC +
Preference number: 2 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELSGLGW*SSRVEN
Trigger: GTTCTCAACTCTGGAACTCCACCAGCCTAACCCACT...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR TCA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTGAAGGGCCTAGGCTGTaGCTTAATTGTCAGGCAGTC +
Preference number: 2 (lower is better)
Translates to: KSYSQARSHIGWNGANGFEGPRL*LNCQAV
Trigger: GACTGCCTGACAATTAAGTCACAGCCTAGGCCCTTC...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR TCA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCAGTCAATATCATTCTaGCTCAGAGTGGGAGGACAG +
Preference number: 2 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELQSISF*LRVGGQ
Trigger: CTGTCCTCCCACTCTGAGTCAGAATGATATTGACTG...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR GCA 90 bp TTTTATTGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGGACAGATAGAGCAACACCACCTGGACATATaGAGACATACAAGCACACAT +
Preference number: 2 (lower is better)
Translates to: FYWGRAQLLMKSLGQIEQHHLDI*RHTSTH
Trigger: ATGTGTGCTTGTATGTCTGCATATGTCCAGGTGGTG...TTGCTCTATCTGTCCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CCA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCACCAGAGCACCACCTaGACATATGCAGACATACAA +
Preference number: 2 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELHQSTT*TYADIQ
Trigger: TTGTATGTCTGCATATGTCCAGGTGGTGCTCTGGTG...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CCA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTTTGAGAACCAGTGCTTaGAATCTGAATTGTGCACCT +
Preference number: 2 (lower is better)
Translates to: RLFLLHYSSGQELPTQPILRTSA*NLNCAP
Trigger: AGGTGCACAATTCAGATTCCAAGCACTGGTTCTCAA...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CCA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGTTAAGTGGGTTAGGCTaGTGGAGTTCCAGAGTTGAG +
Preference number: 2 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELLSGLG*WSSRVE
Trigger: CTCAACTCTGGAACTCCACCAGCCTAACCCACTTAA...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CCA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTTGGAGCACAGGTGGCTaGTTTAAGTGGGTTAGGCTG +
Preference number: 2 (lower is better)
Translates to: KSYSQARSHIGWNGANGFWSTGG*FKWVRL
Trigger: CAGCCTAACCCACTTAAACCAGCCACCTGTGCTCCA...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CCA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTGAAGAAAATGCAACTTaGTTCCCACTCTGTGAGTGT +
Preference number: 2 (lower is better)
Translates to: RLFLLHYSSGQELPTQPIEENAT*FPLCEC
Trigger: ACACTCACAGAGTGGGAACCAAGTTGCATTTTCTTC...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CCA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTAGCCACACCTGCTCCTaGGCCTTGTCATCTATCAAC +
Preference number: 2 (lower is better)
Translates to: KSYSQARSHIGWNGANGFSHTCS*ALSSIN
Trigger: GTTGATAGATGACAAGGCCCAGGAGCAGGTGTGGCT...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR TCA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTGAATTCTCAATGTTGTaGGTTCTTCCAGCTTTCAAG +
Preference number: 2 (lower is better)
Translates to: RLFLLHYSSGQELPTQPIEFSML*VLPAFK
Trigger: CTTGAAAGCTGGAAGAACTCACAACATTGAGAATTC...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR TCA 90 bp GATGGATATTTGGTGTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTGCACTAGAAGAGATCTCCTaGAGGTGCAAGTTGCAGTTG +
Preference number: 2 (lower is better)
Translates to: DGYLVFGPTTQAIVLITALEEIS*RCKLQL
Trigger: CAACTGCAACTTGCACCTTCAGGAGATCTCTTCTAG...TGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAACACCAAATATCCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR GCA 90 bp AGCTATCTTCTCCCAGGACTTCCTTCTGTAGTCCTAAATTTGCTCATTTGGACAAAAATCCAGCAAGAATaGAGGCAAACACTCCGTGGA +
Preference number: 2 (lower is better)
Translates to: SYLLPGLPSVVLNLLIWTKIQQE*RQTLRG
Trigger: TCCACGGAGTGTTTGCCTGCATTCTTGCTGGATTTT...TGTCCAAATGAGCAAATTTAGGACTACAGAAGGAAGTCCTGGGAGAAGATAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CCA 90 bp TTTTATTGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGGACAGATAGAGCAACCTTCTTTAGGGCATTaGTGTTTTTGTTCCCCTTTC +
Preference number: 2 (lower is better)
Translates to: FYWGRAQLLMKSLGQIEQPSLGH*CFCSPF
Trigger: GAAAGGGGAACAAAAACACCAATGCCCTAAAGAAGG...TTGCTCTATCTGTCCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR CAA 90 bp CAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATaGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACAA +
Preference number: 2 (lower is better)
Translates to: QMYRLFLLHYSSGQE*PTQPIRQKVLPKIQ
Trigger: TTGTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR GCA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGTATAAGACACAGCCCTaGTTAGTCACTGCCAAGATA +
Preference number: 2 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELYKTQP*LVTAKI
Trigger: TATCTTGGCAGTGACTAAGCAGGGCTGTGTCTTATA...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CCA 90 bp TGCACAAAGAGAAGGAGAACTGAACAAGACAACTCGGAACAAGAACCTTTGGCCATTAGTGAAAAGAATTaGAGGGTCTTTCTTGGTGGT +
Preference number: 2 (lower is better)
Translates to: CTKRRRTEQDNSEQEPLAISEKN*RVFLGG
Trigger: ACCACCAAGAAAGACCCTCCAATTCTTTTCACTAAT...GGCCAAAGGTTCTTGTTCCGAGTTGTCTTGTTCAGTTCTCCTTCTCTTTGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CCA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTGAAAGGGAATCCACATaGCACAACAGAGCAACAGCA +
Preference number: 2 (lower is better)
Translates to: KSYSQARSHIGWNGANGFEREST*HNRATA
Trigger: TGCTGTTGCTCTGTTGTGCCATGTGGATTCCCTTTC...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CCA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGGCAAGAACAGGTGCTTaGCAAGCTATCTTCCTTTTT +
Preference number: 2 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELARTGA*QAIFLF
Trigger: AAAAAGGAAGATAGCTTGCCAAGCACCTGTTCTTGC...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CCA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTTTGGAGGGTCTTTCTTaGTGGTGCTCATGTTTGTTC +
Preference number: 2 (lower is better)
Translates to: KSYSQARSHIGWNGANGFLEGLS*WCSCLF
Trigger: GAACAAACATGAGCACCACCAAGAAAGACCCTCCAA...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR TCA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTAAAGAGAAGGAGAACTaGACAAGACAACTCGGAACA +
Preference number: 2 (lower is better)
Translates to: KSYSQARSHIGWNGANGFKEKEN*TRQLGT
Trigger: TGTTCCGAGTTGTCTTGTTCAGTTCTCCTTCTCTTT...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR TCA 90 bp GAGAGAGAGAGAGGTTACCATATCTACAAAAAGAGATTTCACATGGTCATCTTAAACTCCCTGAAGAGGTaGACTCCCTTGAATCCTTTA +
Preference number: 2 (lower is better)
Translates to: ERERGYHIYKKRFHMVILNSLKR*TPLNPL
Trigger: TAAAGGATTCAAGGGAGTTCACCTCTTCAGGGAGTT...TAAGATGACCATGTGAAATCTCTTTTTGTAGATATGGTAACCTCTCTCTCTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR GCA 90 bp GAGAGAGAGAGAGGTTACCATATCTACAAAAAGAGATTTCACATGGTCATCTTATGTAGTTGCTCAAGATaGACAAAGAGAAGGAGAACT +
Preference number: 2 (lower is better)
Translates to: ERERGYHIYKKRFHMVILCSCSR*TKRRRT
Trigger: AGTTCTCCTTCTCTTTGTGCATCTTGAGCAACTACA...TAAGATGACCATGTGAAATCTCTTTTTGTAGATATGGTAACCTCTCTCTCTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR TCA 72 bp CAGCAGGAGGGGAGCCTGTATGGTTGCCATGAGGGGTaGGTTCCAACCAATGAGCCCACCAGAGCACCACCT +
Preference number: 3 (lower is better)
Translates to: QQEGSLYGCHEG*VPTNEPTRAPP
Trigger: AGGTGGTGCTCTGGTGGGCTCATTGGTTGGAACTCACCCCTCATGGCAACCATACAGGCTCCCCTCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR CCA 72 bp AGTTGGCAGGGATTCGGAGAGACACACAACCAAGTCTaGCTGTCCTGCCTGCCCCCTTCTCTTCATCTCCCT +
Preference number: 3 (lower is better)
Translates to: SWQGFGETHNQV*LSCLPPSLHLP
Trigger: AGGGAGATGAAGAGAAGGGGGCAGGCAGGACAGCCAGACTTGGTTGTGTGTCTCTCCGAATCCCTGCCAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR TCA 72 bp GGCCAAGATGGAGCTTGTGGGGAAGGGCCTAGGCTGTaGCTTAATTGTCAGGCAGTCCCTAGTTCAGGCATC +
Preference number: 3 (lower is better)
Translates to: GQDGACGEGPRL*LNCQAVPSSGI
Trigger: GATGCCTGAACTAGGGACTGCCTGACAATTAAGTCACAGCCTAGGCCCTTCCCCACAAGCTCCATCTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR CCA 72 bp CCCTTGTTAATATTTTTCTCCTCACCCCTGCGGAGGTaGAGCACAGGTGGCTGGTTTAAGTGGGTTAGGCTG +
Preference number: 3 (lower is better)
Translates to: PLLIFFSSPLRR*STGGWFKWVRL
Trigger: CAGCCTAACCCACTTAAACCAGCCACCTGTGCTCCACCTCCGCAGGGGTGAGGAGAAAAATATTAACAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CAA 90 bp GTGCAGGTGTCAATGCATGCAGCCATAGAGGAGCCAAGTCAGGCTGCAATAGTGGGTGGAGTTCCAGAGTaGAGAACCAGTGCTTGGAAT +
Preference number: 3 (lower is better)
Translates to: VQVSMHAAIEEPSQAAIVGGVPE*RTSAWN
Trigger: ATTCCAAGCACTGGTTCTCAACTCTGGAACTCCACC...CACTATTGCAGCCTGACTTGGCTCCTCTATGGCTGCATGCATTGACACCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CAA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACGAGGTAACTGAGGGATaGAGCAAGCCACACCTGCTC +
Preference number: 3 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYEVTEG*SKPHLL
Trigger: GAGCAGGTGTGGCTTGCTCAATCCCTCAGTTACCTC...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CAA 90 bp GAGCTCAAGGCCTGGTTGCTCCATATAGTCTTTTTATTGGGGAAGGGCACAGTTAGGGCATTGGTGTTTTaGTTCCCCTTTCCATGGCCT +
Preference number: 3 (lower is better)
Translates to: ELKAWLLHIVFLLGKGTVRALVF*FPFPWP
Trigger: AGGCCATGGAAAGGGGAACAAAAACACCAATGCCCT...AACTGTGCCCTTCCCCAATAAAAAGACTATATGGAGCAACCAGGCCTTGAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CAA 90 bp GTGCAGGTGTCAATGCATGCAGCCATAGAGGAGCCAAGTCAGGCTGCAATAGTGCATATAGTCTTTTTATaGGGGAAGGGCACAGTTGCT +
Preference number: 3 (lower is better)
Translates to: VQVSMHAAIEEPSQAAIVHIVFL*GKGTVA
Trigger: AGCAACTGTGCCCTTCCCCAATAAAAAGACTATATG...CACTATTGCAGCCTGACTTGGCTCCTCTATGGCTGCATGCATTGACACCTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR GCA 72 bp GCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTaGTACCAAAGATACAACCAAACCCTAGAGCTTTGG +
Preference number: 3 (lower is better)
Translates to: ARNCLPNQFVRK*YQRYNQTLELW
Trigger: CCAAAGCTCTAGGGTTTGGTTGTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CAA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACCAAGAAATAGGGCAGTaGGTAGAGGTGTATGTGTTA +
Preference number: 3 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYQEIGQ*VEVYVL
Trigger: TAACACATACACCTCTACCAACTGCCCTATTTCTTG...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CAA 90 bp ACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACTGCTTGGAATCTGAATaGTGCACCTCAATGAACCAG +
Preference number: 3 (lower is better)
Translates to: TILLARNCLPNQFVRKCYCLESE*CTSMNQ
Trigger: CTGGTTCATTGAGGTGCACAATTCAGATTCCAAGCA...GTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR GCA 72 bp GGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTaGCTACCCAACCAATTCGTCAGAAAGTGCTACCAA +
Preference number: 3 (lower is better)
Translates to: GFFFSTILLARN*LPNQFVRKCYQ
Trigger: TTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR TCA 72 bp GGACTGAATCAGGTAATTGAGCACGCTAAGTTTGTCTaGGAAGTAGGGAGAGGCCAGTTTTCTCTTGATAAG +
Preference number: 3 (lower is better)
Translates to: GLNQVIEHAKFV*EVGRGQFSLDK
Trigger: CTTATCAAGAGAAAACTGGCCTCTCCCTACTTCTCAGACAAACTTAGCGTGCTCAATTACCTGATTCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CAA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGACAGCAATCAGACATTaGGGGACTATCCCCTTGTTA +
Preference number: 3 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELTAIRH*GTIPLL
Trigger: TAACAAGGGGATAGTCCCCAAATGTCTGATTGCTGT...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR CCA 72 bp TCCCACCACCCAAGCAATTGTATTAATTACTGCAAGTaGTTAACAAAGTCCTTAAAGGAGCTCACACTCCCA +
Preference number: 3 (lower is better)
Translates to: SHHPSNCINYCK*LTKSLKELTLP
Trigger: TGGGAGTGTGAGCTCCTTTAAGGACTTTGTTAACCACTTGCAGTAATTAATACAATTGCTTGGGTGGTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CAA 90 bp GATGGATATTTGGTGTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTGCAATTGGAGGGTCTTTCTaGGTGGTGCTCATGTTTGTT +
Preference number: 3 (lower is better)
Translates to: DGYLVFGPTTQAIVLITAIGGSF*VVLMFV
Trigger: AACAAACATGAGCACCACCAAGAAAGACCCTCCAAT...TGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAACACCAAATATCCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CAA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTTCTGTAGTCCTAAATTaGCTCATTTGGACATTTTCC +
Preference number: 3 (lower is better)
Translates to: RLFLLHYSSGQELPTQPISVVLN*LIWTFS
Trigger: GGAAAATGTCCAAATGAGCAAATTTAGGACTACAGA...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR GCA 72 bp GTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTaGAAGTGGTTAACAAAGTCCTTAAAGGAGCTCACA +
Preference number: 3 (lower is better)
Translates to: VWSHHPSNCINY*KWLTKSLKELT
Trigger: TGTGAGCTCCTTTAAGGACTTTGTTAACCACTTGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR CCA 72 bp TTTACCTCCTATAGTATTGACACCAGAAGCAGTTGGTaGCAGTTCAAATGTATCGGCTTTTTCTTCTCCACT +
Preference number: 3 (lower is better)
Translates to: FTSYSIDTRSSW*QFKCIGFFFST
Trigger: AGTGGAGAAGAAAAAGCCGATACATTTGAACTGCCACCAACTGCTTCTGGTGTCAATACTATAGGAGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CAA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTCCCTTCTTTAGGGCATaGGTGTTTTTGTTCCCCTTT +
Preference number: 3 (lower is better)
Translates to: KSYSQARSHIGWNGANGFPFFRA*VFLFPF
Trigger: AAAGGGGAACAAAAACACCAATGCCCTAAAGAAGGG...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CAA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTTTGAGGCATCACTTCTaGCTTTGTTTCCAAGTGAGC +
Preference number: 3 (lower is better)
Translates to: KSYSQARSHIGWNGANGFLRHHF*LCFQVS
Trigger: GCTCACTTGGAAACAAAGCAAGAAGTGATGCCTCAA...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CAA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTGAGGTGTATGTGTTATaGTTATGTAGAGTAAGGGGG +
Preference number: 3 (lower is better)
Translates to: KSYSQARSHIGWNGANGFEVYVL*LCRVRG
Trigger: CCCCCTTACTCTACATAACAATAACACATACACCTC...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR-3UTR CAA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGGTTTTCATGAGAAATTaGCAAGAAGAACCACAGGAA +
Preference number: 3 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELVFMRN*QEEPQE
Trigger: TTCCTGTGGTTCTTCTTGCAAATTTCTCATGAAAAC...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR TCA 72 bp GGGTCTTTCTTGGTGGTGCTCATGTTTGTTCTGAAATaGTTTAGTCTAGCCTGTATTGAGGTTTTGAGAGTT +
Preference number: 3 (lower is better)
Translates to: GSFLVVLMFVLK*FSLACIEVLRV
Trigger: AACTCTCAAAACCTCAATACAGGCTAGACTAAATCATTTCAGAACAAACATGAGCACCACCAAGAAAGACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR CCA 72 bp CACAAATCATATAGCCAAGCAAGGTCTCATATAGGATaGAATGGTGCTAATGGGTTTGGTTGCTTTGGTATT +
Preference number: 3 (lower is better)
Translates to: HKSYSQARSHIG*NGANGFGCFGI
Trigger: AATACCAAAGCAACCAAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp TGCAGGCTAGGATCAAGGCAGCAGGAGGGGAGCCTGTATGGTTGCCATGAGGGGAGGCGGCGGAGGCTCTaGAGACTCAGCGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: CRLGSRQQEGSLYGCHEGRRRRL*RLSGLL
Trigger: GAGCAGCCCGCTGAGTCTCCAGAGCCTCCGCCGCCT...CCCCTCATGGCAACCATACAGGCTCCCCTCCTGCTGCCTTGATCCTAGCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GTGCAGGTGTCAATGCATGCAGCCATAGAGGAGCCAAGTCAGGCTGCAATAGTGTTCTGGGGTCGGCTCTaGGGCCAGCTCTGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: VQVSMHAAIEEPSQAAIVFWGRL*GQLWGN
Trigger: GTTGCCCCAGAGCTGGCCCCAGAGCCGACCCCAGAA...CACTATTGCAGCCTGACTTGGCTCCTCTATGGCTGCATGCATTGACACCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp GTGCAGGTGTCAATGCATGCAGCCATAGAGGAGCCAAGTCAGGCTGCAATAGTGCAGCCCCTCGCAGGGTaGCAAACTTTCCCCCATCCC +
Preference number: 4 (lower is better)
Translates to: VQVSMHAAIEEPSQAAIVQPLAG*QTFPHP
Trigger: GGGATGGGGGAAAGTTTGGCACCCTGCGAGGGGCTG...CACTATTGCAGCCTGACTTGGCTCCTCTATGGCTGCATGCATTGACACCTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GTGCAGGTGTCAATGCATGCAGCCATAGAGGAGCCAAGTCAGGCTGCAATAGTGCTGAGGCCGGCTCTGTaGCTGGTTCTGGGGTCGGTT +
Preference number: 4 (lower is better)
Translates to: VQVSMHAAIEEPSQAAIVLRPAL*LVLGSV
Trigger: AACCGACCCCAGAACCAGCCACAGAGCCGGCCTCAG...CACTATTGCAGCCTGACTTGGCTCCTCTATGGCTGCATGCATTGACACCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp TGCAGGCTAGGATCAAGGCAGCAGGAGGGGAGCCTGTATGGTTGCCATGAGGGGCTGCACCCATCTCATTaGCACTGTCTTGGCCGTAAA +
Preference number: 4 (lower is better)
Translates to: CRLGSRQQEGSLYGCHEGLHPSH*HCLGRK
Trigger: TTTACGGCCAAGACAGTGGCAATGAGATGGGTGCAG...CCCCTCATGGCAACCATACAGGCTCCCCTCCTGCTGCCTTGATCCTAGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GTGCAGGTGTCAATGCATGCAGCCATAGAGGAGCCAAGTCAGGCTGCAATAGTGGACAGGGCTCTGGTATaGGTTCTGGCGAAGCCTCGG +
Preference number: 4 (lower is better)
Translates to: VQVSMHAAIEEPSQAAIVDRALV*VLAKPR
Trigger: CCGAGGCTTCGCCAGAACCCATACCAGAGCCCTGTC...CACTATTGCAGCCTGACTTGGCTCCTCTATGGCTGCATGCATTGACACCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp AGAAGAGATCTCCTGAAGGTGCAAGTTGCAGTTGGCAGGGATTCGGAGAGACACGGCCGGCTCTGTGGCTaGTTCTGGGGTCGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: RRDLLKVQVAVGRDSERHGRLCG*FWGRFC
Trigger: ACAGAACCGACCCCAGAACCAGCCACAGAGCCGGCC...GTGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACCTTCAGGAGATCTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp GTGCAGGTGTCAATGCATGCAGCCATAGAGGAGCCAAGTCAGGCTGCAATAGTGGGTTGCCATGAGGGGTaGGTTCCAACCAATGAGCCC +
Preference number: 4 (lower is better)
Translates to: VQVSMHAAIEEPSQAAIVGCHEG*VPTNEP
Trigger: GGGCTCATTGGTTGGAACTCACCCCTCATGGCAACC...CACTATTGCAGCCTGACTTGGCTCCTCTATGGCTGCATGCATTGACACCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GTGCAGGTGTCAATGCATGCAGCCATAGAGGAGCCAAGTCAGGCTGCAATAGTGCTCTGGACAGGGCTCTaGTATGGGTTCTGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: VQVSMHAAIEEPSQAAIVLWTGL*YGFWRS
Trigger: GCTTCGCCAGAACCCATACCAGAGCCCTGTCCAGAG...CACTATTGCAGCCTGACTTGGCTCCTCTATGGCTGCATGCATTGACACCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTTTCTGGGGCCGGTTCTaGGGCCGGCTCTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RLFLLHYSSGQELPTQPIFWGRF*GRLCGR
Trigger: CCTGCCACAGAGCCGGCCCCAGAACCGGCCCCAGAA...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp TGCAGGCTAGGATCAAGGCAGCAGGAGGGGAGCCTGTATGGTTGCCATGAGGGGGCTGCAAAAGTTCTTTaGTTCCCAGAAGGCCATACC +
Preference number: 4 (lower is better)
Translates to: CRLGSRQQEGSLYGCHEGAAKVL*FPEGHT
Trigger: GGTATGGCCTTCTGGGAACCAAAGAACTTTTGCAGC...CCCCTCATGGCAACCATACAGGCTCCCCTCCTGCTGCCTTGATCCTAGCCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GTGCAGGTGTCAATGCATGCAGCCATAGAGGAGCCAAGTCAGGCTGCAATAGTGGGCGTCAGAATCAGCTaGGCCATAGATCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: VQVSMHAAIEEPSQAAIVGVRIS*AIDPSH
Trigger: GTGGCTGGGATCTATGGCCCAGCTGATTCTGACGCC...CACTATTGCAGCCTGACTTGGCTCCTCTATGGCTGCATGCATTGACACCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp TGCAGGCTAGGATCAAGGCAGCAGGAGGGGAGCCTGTATGGTTGCCATGAGGGGACCAGAAGCAGTTGGTaGCAGTTCAAATGTATCGGC +
Preference number: 4 (lower is better)
Translates to: CRLGSRQQEGSLYGCHEGTRSSW*QFKCIG
Trigger: GCCGATACATTTGAACTGCCACCAACTGCTTCTGGT...CCCCTCATGGCAACCATACAGGCTCCCCTCCTGCTGCCTTGATCCTAGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp TGCAGGCTAGGATCAAGGCAGCAGGAGGGGAGCCTGTATGGTTGCCATGAGGGGATTAACATTGAGGACTaGTGTTCCATTTGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: CRLGSRQQEGSLYGCHEGINIED*CSIWRG
Trigger: CCCCCGCCAAATGGAACACCAGTCCTCAATGTTAAT...CCCCTCATGGCAACCATACAGGCTCCCCTCCTGCTGCCTTGATCCTAGCCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp TGCAGGCTAGGATCAAGGCAGCAGGAGGGGAGCCTGTATGGTTGCCATGAGGGGTGTCCAGAGGTGACTTaGTTTTGTTCCAGAATGCAC +
Preference number: 4 (lower is better)
Translates to: CRLGSRQQEGSLYGCHEGCPEVT*FCSRMH
Trigger: GTGCATTCTGGAACAAAAGCAAGTCACCTCTGGACA...CCCCTCATGGCAACCATACAGGCTCCCCTCCTGCTGCCTTGATCCTAGCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp GTGCAGGTGTCAATGCATGCAGCCATAGAGGAGCCAAGTCAGGCTGCAATAGTGAGCAGAAGTAGCTGCTaGCTCCTCAGCCAGGACATC +
Preference number: 4 (lower is better)
Translates to: VQVSMHAAIEEPSQAAIVSRSSC*LLSQDI
Trigger: GATGTCCTGGCTGAGGAGGCAGCAGCTACTTCTGCT...CACTATTGCAGCCTGACTTGGCTCCTCTATGGCTGCATGCATTGACACCTGCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp TGCAGGCTAGGATCAAGGCAGCAGGAGGGGAGCCTGTATGGTTGCCATGAGGGGAAAATCCAGCAAGAATaGAGGCAAACACTCCGTGGA +
Preference number: 4 (lower is better)
Translates to: CRLGSRQQEGSLYGCHEGKIQQE*RQTLRG
Trigger: TCCACGGAGTGTTTGCCTGCATTCTTGCTGGATTTT...CCCCTCATGGCAACCATACAGGCTCCCCTCCTGCTGCCTTGATCCTAGCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCAGCTCCGCGGTCCATaGCCGCACACCGCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: RLFLLHYSSGQELPTQPIQLRGP*PHTASG
Trigger: ACCTGAAGCGGTGTGCGGCCATGGACCGCGGAGCTG...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp TGCACAAAGAGAAGGAGAACTGAACAAGACAACTCGGAACAAGAACCTTTGGCCCTCTGTGGCAGGTTCTaGGGCCGGCTCTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: CTKRRRTEQDNSEQEPLALCGRF*GRLCGR
Trigger: CCTGCCACAGAGCCGGCCCCAGAACCTGCCACAGAG...GGCCAAAGGTTCTTGTTCCGAGTTGTCTTGTTCAGTTCTCCTTCTCTTTGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp AGAAGAGATCTCCTGAAGGTGCAAGTTGCAGTTGGCAGGGATTCGGAGAGACACACATGGTGCTGGACTTaGACGGAACTCTGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: RRDLLKVQVAVGRDSERHTWCWT*TELWSR
Trigger: GCGGCTCCAGAGTTCCGTCCAAGTCCAGCACCATGT...GTGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACCTTCAGGAGATCTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp TGCAGGCTAGGATCAAGGCAGCAGGAGGGGAGCCTGTATGGTTGCCATGAGGGGATTCTAAGTGTTGGATaGCAGCAGCCTCAAATCGTG +
Preference number: 4 (lower is better)
Translates to: CRLGSRQQEGSLYGCHEGILSVG*QQPQIV
Trigger: CACGATTTGAGGCTGCTGCCATCCAACACTTAGAAT...CCCCTCATGGCAACCATACAGGCTCCCCTCCTGCTGCCTTGATCCTAGCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp AGAAGAGATCTCCTGAAGGTGCAAGTTGCAGTTGGCAGGGATTCGGAGAGACACCTGGACACTCTGGCCTaGTTTAGGCTTGCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: RRDLLKVQVAVGRDSERHLDTLA*FRLAFL
Trigger: GAGGAACGCAAGCCTAAATCAGGCCAGAGTGTCCAG...GTGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACCTTCAGGAGATCTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACGAGTCAAGGGTGGGGTaGAGATGCAAGGCTGACCAG +
Preference number: 4 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYESRVG*RCKADQ
Trigger: CTGGTCAGCCTTGCATCTTCACCCCACCCTTGACTC...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp GTGCAGGTGTCAATGCATGCAGCCATAGAGGAGCCAAGTCAGGCTGCAATAGTGATCAACTGTGCTCCATaGGCTGACTCTAGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: VQVSMHAAIEEPSQAAIVINCAP*ADSSPK
Trigger: TTTGGGGCTAGAGTCAGCTCATGGAGCACAGTTGAT...CACTATTGCAGCCTGACTTGGCTCCTCTATGGCTGCATGCATTGACACCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp TTTTATTGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGGACAGATAGAGCAAACCAGCCCCTGGCCCTaGTGCTTATTTGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: FYWGRAQLLMKSLGQIEQTSPWP*CLFAGA
Trigger: GGCCCCTGCAAATAAGCAGCAGGGCCAGGGGCTGGT...TTGCTCTATCTGTCCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp TTTTATTGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGGACAGATAGAGCAACTGGGGCAGACTCTGTaGCAGGTTCTGGGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: FYWGRAQLLMKSLGQIEQLGQTL*QVLGPV
Trigger: AACCGGCCCCAGAACCTGCCACAGAGTCTGCCCCAG...TTGCTCTATCTGTCCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp TTTTATTGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGGACAGATAGAGCAACTCTGGGGCAACTTCTaGAGTCAGCTCTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: FYWGRAQLLMKSLGQIEQLWGNF*SQLWGR
Trigger: CCGGCCCCAGAGCTGACTCCAGAAGTTGCCCCAGAG...TTGCTCTATCTGTCCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GTGCAGGTGTCAATGCATGCAGCCATAGAGGAGCCAAGTCAGGCTGCAATAGTGATTGCCGGTTCCAAGTaGGATGACTGCCAACTGACA +
Preference number: 4 (lower is better)
Translates to: VQVSMHAAIEEPSQAAIVIAGSK*DDCQLT
Trigger: TGTCAGTTGGCAGTCATCCCACTTGGAACCGGCAAT...CACTATTGCAGCCTGACTTGGCTCCTCTATGGCTGCATGCATTGACACCTGCAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp AGAAGAGATCTCCTGAAGGTGCAAGTTGCAGTTGGCAGGGATTCGGAGAGACACGAGCCTCATATTCCGTaGTTGCTGTGTTGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RRDLLKVQVAVGRDSERHEPHIP*LLCCFP
Trigger: GGGGAAGCAACACAGCAACCACGGAATATGAGGCTC...GTGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACCTTCAGGAGATCTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp GAGAGAGAGAGAGGTTACCATATCTACAAAAAGAGATTTCACATGGTCATCTTAGGCTGCTCTCCATCCTaGGGCGGGGCAGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: ERERGYHIYKKRFHMVILGCSPS*GGAVPW
Trigger: CCAGGGCACTGCCCCGCCTCAGGATGGAGAGCAGCC...TAAGATGACCATGTGAAATCTCTTTTTGTAGATATGGTAACCTCTCTCTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTTTCTGGGGCCGGTTCTaGGGCCGGCTCTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: KSYSQARSHIGWNGANGFFWGRF*GRLCGW
Trigger: CCAGCCACAGAGCCGGCCTCAGAACCGGCCCCAGAA...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp AGAAGAGATCTCCTGAAGGTGCAAGTTGCAGTTGGCAGGGATTCGGAGAGACACCTGCACACTGAGAGCTaGCAGGCATGTTTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: RRDLLKVQVAVGRDSERHLHTES*QACFLL
Trigger: TAGAAGGAAACATGCCTGTCAGCTCTCAGTGTGCAG...GTGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACCTTCAGGAGATCTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp GAGCTCAAGGCCTGGTTGCTCCATATAGTCTTTTTATTGGGGAAGGGCACAGTTCCTGCTCCACTCTGTTaGGGATGTCCAGAGGTGACT +
Preference number: 4 (lower is better)
Translates to: ELKAWLLHIVFLLGKGTVPAPLC*GCPEVT
Trigger: AGTCACCTCTGGACATCCTCAACAGAGTGGAGCAGG...AACTGTGCCCTTCCCCAATAAAAAGACTATATGGAGCAACCAGGCCTTGAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp GTGCAGGTGTCAATGCATGCAGCCATAGAGGAGCCAAGTCAGGCTGCAATAGTGCTCATATTCCGTGGTTaGTGTGTTGCTTCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: VQVSMHAAIEEPSQAAIVLIFRG*CVASPE
Trigger: TTCTGGGGAAGCAACACAGCAACCACGGAATATGAG...CACTATTGCAGCCTGACTTGGCTCCTCTATGGCTGCATGCATTGACACCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACGCAAGCCGAGCTAAGTaGTGCATCTGGGCATACTCC +
Preference number: 4 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYASRAK*CIWAYS
Trigger: GGAGTATGCCCAGATGCAGCACTTAGCTCGGCTTGC...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp AGAAGAGATCTCCTGAAGGTGCAAGTTGCAGTTGGCAGGGATTCGGAGAGACACCTTCTGGCCAGGAATTaGCTACCCAACCAATTCGTC +
Preference number: 4 (lower is better)
Translates to: RRDLLKVQVAVGRDSERHLLARN*LPNQFV
Trigger: GACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAG...GTGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACCTTCAGGAGATCTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp TTTTATTGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGGACAGATAGAGCAACTCTGGGGCCAGCTCTaGGGCAACTTCTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: FYWGRAQLLMKSLGQIEQLWGQL*GNFWSQ
Trigger: CTGACTCCAGAAGTTGCCCCAGAGCTGGCCCCAGAG...TTGCTCTATCTGTCCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GTGCAGGTGTCAATGCATGCAGCCATAGAGGAGCCAAGTCAGGCTGCAATAGTGTGCTTTCTGCCACAGTaGCTTGAGACAGATCAATCG +
Preference number: 4 (lower is better)
Translates to: VQVSMHAAIEEPSQAAIVCFLPQ*LETDQS
Trigger: CGATTGATCTGTCTCAAGCCACTGTGGCAGAAAGCA...CACTATTGCAGCCTGACTTGGCTCCTCTATGGCTGCATGCATTGACACCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GTGCAGGTGTCAATGCATGCAGCCATAGAGGAGCCAAGTCAGGCTGCAATAGTGCGTCGTGGGCTTGTCTaGTTAATATCTTCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: VQVSMHAAIEEPSQAAIVRRGLV*LISSGS
Trigger: TGACCCAGAAGATATTAACCAGACAAGCCCACGACG...CACTATTGCAGCCTGACTTGGCTCCTCTATGGCTGCATGCATTGACACCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp TTTTATTGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGGACAGATAGAGCAATCACCCCTGCGGAGGTaGAGCACAGGTGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: FYWGRAQLLMKSLGQIEQSPLRR*STGGWF
Trigger: AAACCAGCCACCTGTGCTCCACCTCCGCAGGGGTGA...TTGCTCTATCTGTCCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACCCTGTATGGTTGCCATaGGGGGTGAGTTCCAACCAA +
Preference number: 4 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYPVWLP*GVSSNQ
Trigger: TTGGTTGGAACTCACCCCTCATGGCAACCATACAGG...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp GAGCTCAAGGCCTGGTTGCTCCATATAGTCTTTTTATTGGGGAAGGGCACAGTTGAAGGGCCTAGGCTGTaGCTTAATTGTCAGGCAGTC +
Preference number: 4 (lower is better)
Translates to: ELKAWLLHIVFLLGKGTVEGPRL*LNCQAV
Trigger: GACTGCCTGACAATTAAGTCACAGCCTAGGCCCTTC...AACTGTGCCCTTCCCCAATAAAAAGACTATATGGAGCAACCAGGCCTTGAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp GTGCAGGTGTCAATGCATGCAGCCATAGAGGAGCCAAGTCAGGCTGCAATAGTGTCCAAGTGGGATGACTaGCAACTGACACTTTTCATG +
Preference number: 4 (lower is better)
Translates to: VQVSMHAAIEEPSQAAIVSKWDD*QLTLFM
Trigger: CATGAAAAGTGTCAGTTGGCAGTCATCCCACTTGGA...CACTATTGCAGCCTGACTTGGCTCCTCTATGGCTGCATGCATTGACACCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACGCTTTTGTTCCAGAATaGACCCCAGCCCAGAACACG +
Preference number: 4 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYAFVPE*TPAQNT
Trigger: CGTGTTCTGGGCTGGGGTGCATTCTGGAACAAAAGC...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp TGCACAAAGAGAAGGAGAACTGAACAAGACAACTCGGAACAAGAACCTTTGGCCTTCAGCAGAAGTAGCTaGTGCCTCCTCAGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: CTKRRRTEQDNSEQEPLAFSRSS*CLLSQD
Trigger: GTCCTGGCTGAGGAGGCAGCAGCTACTTCTGCTGAA...GGCCAAAGGTTCTTGTTCCGAGTTGTCTTGTTCAGTTCTCCTTCTCTTTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACGCAGCGGGGTTTGTCTaGGAGTCTCACGAATCATCA +
Preference number: 4 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYAAGFV*ESHESS
Trigger: TGATGATTCGTGAGACTCCCAGACAAACCCCGCTGC...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACGGTGGCTGGTTTAAGTaGGTTAGGCTGGTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYGGWFK*VRLVEF
Trigger: GAACTCCACCAGCCTAACCCACTTAAACCAGCCACC...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GAGCTCAAGGCCTGGTTGCTCCATATAGTCTTTTTATTGGGGAAGGGCACAGTTAGCCACACCTGCTCCTaGGCCTTGTCATCTATCAAC +
Preference number: 4 (lower is better)
Translates to: ELKAWLLHIVFLLGKGTVSHTCS*ALSSIN
Trigger: GTTGATAGATGACAAGGCCCAGGAGCAGGTGTGGCT...AACTGTGCCCTTCCCCAATAAAAAGACTATATGGAGCAACCAGGCCTTGAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp AGAAGAGATCTCCTGAAGGTGCAAGTTGCAGTTGGCAGGGATTCGGAGAGACACTCTCCACTATTCTTCTaGCCAGGAATTGCCTACCCA +
Preference number: 4 (lower is better)
Translates to: RRDLLKVQVAVGRDSERHSPLFF*PGIAYP
Trigger: TGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGA...GTGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACCTTCAGGAGATCTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp AGAAGAGATCTCCTGAAGGTGCAAGTTGCAGTTGGCAGGGATTCGGAGAGACACGCTATGTGGTCTATTTaGGGAATGAAGGGCTTCCTA +
Preference number: 4 (lower is better)
Translates to: RRDLLKVQVAVGRDSERHAMWSI*GMKGFL
Trigger: TAGGAAGCCCTTCATTCCTCAAATAGACCACATAGC...GTGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACCTTCAGGAGATCTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGGTGAGTTCCAACCAATaGGCCCACCAGAGCACCACC +
Preference number: 4 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELVSSNQ*AHQSTT
Trigger: GGTGGTGCTCTGGTGGGCTCATTGGTTGGAACTCAC...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCACGCTAAGTTTGTCTaGGAAGTAGGGAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RLFLLHYSSGQELPTQPIHAKFV*EVGRGQ
Trigger: CTGGCCTCTCCCTACTTCTCAGACAAACTTAGCGTG...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp GTGCAGGTGTCAATGCATGCAGCCATAGAGGAGCCAAGTCAGGCTGCAATAGTGCTTGCAGTCTTTGCTTaGTCTCAAAGCACACAATCT +
Preference number: 4 (lower is better)
Translates to: VQVSMHAAIEEPSQAAIVLAVFA*SQSTQS
Trigger: AGATTGTGTGCTTTGAGAGCAAGCAAAGACTGCAAG...CACTATTGCAGCCTGACTTGGCTCCTCTATGGCTGCATGCATTGACACCTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACATCCTCACACTAGCCTaGTCCACTCTGTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYILTLA*STLLRM
Trigger: CATCCTCAACAGAGTGGAGCAGGCTAGTGTGAGGAT...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp GAGCTCAAGGCCTGGTTGCTCCATATAGTCTTTTTATTGGGGAAGGGCACAGTTCGGGACATTGCCATCTaGACAGAACCAAAGATTGCC +
Preference number: 4 (lower is better)
Translates to: ELKAWLLHIVFLLGKGTVRDIAI*TEPKIA
Trigger: GGCAATCTTTGGTTCTGTGCAGATGGCAATGTCCCG...AACTGTGCCCTTCCCCAATAAAAAGACTATATGGAGCAACCAGGCCTTGAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp GTGCAGGTGTCAATGCATGCAGCCATAGAGGAGCCAAGTCAGGCTGCAATAGTGAGAGTTGAGAACCAGTaGTTGGAATCTGAATTGTGC +
Preference number: 4 (lower is better)
Translates to: VQVSMHAAIEEPSQAAIVRVENQ*LESELC
Trigger: GCACAATTCAGATTCCAAGCACTGGTTCTCAACTCT...CACTATTGCAGCCTGACTTGGCTCCTCTATGGCTGCATGCATTGACACCTGCAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp AGAAGAGATCTCCTGAAGGTGCAAGTTGCAGTTGGCAGGGATTCGGAGAGACACTTCCAAGTGAGCATATaGAAGAACAGGTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RRDLLKVQVAVGRDSERHFQVSI*KNRCLA
Trigger: TGCCAAGCACCTGTTCTTGCATATGCTCACTTGGAA...GTGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACCTTCAGGAGATCTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGACCTGGAGCAAGCTCTaGACAGGGCTCTGGTATGGG +
Preference number: 4 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELTWSKL*TGLWYG
Trigger: CCCATACCAGAGCCCTGTCCAGAGCTTGCTCCAGGT...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTGCTAAGTGCTGCATCTaGGCATACTCCTCGTCAGAG +
Preference number: 4 (lower is better)
Translates to: RLFLLHYSSGQELPTQPIAKCCI*AYSSSE
Trigger: CTCTGACGAGGAGTATGCCCAGATGCAGCACTTAGC...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACAGGACAGACACATGCTaGTGGATCTTGCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYRTDTC*WILLRS
Trigger: TGACCTGAGCAAGATCCACCAGCATGTGTCTGTCCT...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp AGAAGAGATCTCCTGAAGGTGCAAGTTGCAGTTGGCAGGGATTCGGAGAGACACTTCTCTTCATCTCCCTaGGAGTCTGTGTGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: RRDLLKVQVAVGRDSERHFSSSP*ESVCLS
Trigger: TGAAAGACACACAGACTCCCAGGGAGATGAAGAGAA...GTGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACCTTCAGGAGATCTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp TTTTATTGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGGACAGATAGAGCAAAAGATCAGGCCAAGATaGAGCTTGTGGGGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: FYWGRAQLLMKSLGQIEQKIRPR*SLWGRA
Trigger: GGCCCTTCCCCACAAGCTCCATCTTGGCCTGATCTT...TTGCTCTATCTGTCCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACCATTCTGACTCAGAGTaGGAGGACAGGGTAGGTGAA +
Preference number: 4 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYHSDSE*EDRVGE
Trigger: TTCACCTACCCTGTCCTCCCACTCTGAGTCAGAATG...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTAGCACAGGGCCTTTCTaGAGAAGGGGACCCATAACT +
Preference number: 4 (lower is better)
Translates to: RLFLLHYSSGQELPTQPISTGPF*RRGPIT
Trigger: AGTTATGGGTCCCCTTCTCCAGAAAGGCCCTGTGCT...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GATGGATATTTGGTGTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTGCACCCCCAACCAGCCCCTaGCCCTGCTGCTTATTTGCA +
Preference number: 4 (lower is better)
Translates to: DGYLVFGPTTQAIVLITAPPTSP*PCCLFA
Trigger: TGCAAATAAGCAGCAGGGCCAGGGGCTGGTTGGGGG...TGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAACACCAAATATCCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR CAA 72 bp GAGCTCAAGGCCTGGTTGCTCCATATAGTCTTTTTATaGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGG +
Preference number: 4 (lower is better)
Translates to: ELKAWLLHIVFL*GKGTVADEESR
Trigger: CCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAAAGACTATATGGAGCAACCAGGCCTTGAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR CAA 72 bp GCCATAGAGGAGCCAAGTCAGGCTGCAATAGTGAGCTaGCTGATTTCATCTAATACCTCCTCCTGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: AIEEPSQAAIVS*LISSNTSSWEE
Trigger: TTCTTCCCAGGAGGAGGTATTAGATGAAATCAGCAAGCTCACTATTGCAGCCTGACTTGGCTCCTCTATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACGAGGATGTCCAGAGGTaGCTTGCTTTTGTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYEDVQR*LAFVPE
Trigger: TTCTGGAACAAAAGCAAGTCACCTCTGGACATCCTC...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp GAGCTCAAGGCCTGGTTGCTCCATATAGTCTTTTTATTGGGGAAGGGCACAGTTAGAATCTGGTTGCGATaGTCATCTCTGTGGGGTACT +
Preference number: 4 (lower is better)
Translates to: ELKAWLLHIVFLLGKGTVRIWLR*SSLWGT
Trigger: AGTACCCCACAGAGATGATCATCGCAACCAGATTCT...AACTGTGCCCTTCCCCAATAAAAAGACTATATGGAGCAACCAGGCCTTGAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCATTCACAGAACCCATaGGGACAGACACATGCTGGT +
Preference number: 4 (lower is better)
Translates to: RLFLLHYSSGQELPTQPIHSQNP*GQTHAG
Trigger: ACCAGCATGTGTCTGTCCTCATGGGTTCTGTGAATG...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp TTTTATTGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGGACAGATAGAGCAAGTGAAGATGCAAGGCTaGCCAGAGAGAACCTCTCTG +
Preference number: 4 (lower is better)
Translates to: FYWGRAQLLMKSLGQIEQVKMQG*PERTSL
Trigger: CAGAGAGGTTCTCTCTGGTCAGCCTTGCATCTTCAC...TTGCTCTATCTGTCCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp TGCACAAAGAGAAGGAGAACTGAACAAGACAACTCGGAACAAGAACCTTTGGCCGTGGAGTTCCAGAGTTaGGAACCAGTGCTTGGAATC +
Preference number: 4 (lower is better)
Translates to: CTKRRRTEQDNSEQEPLAVEFQS*EPVLGI
Trigger: GATTCCAAGCACTGGTTCTCAACTCTGGAACTCCAC...GGCCAAAGGTTCTTGTTCCGAGTTGTCTTGTTCAGTTCTCCTTCTCTTTGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACCAGTCAATATCATTCTaGCTCAGAGTGGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYQSISF*LRVGGQ
Trigger: CTGTCCTCCCACTCTGAGTCAGAATGATATTGACTG...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGTCTCTCGACAAACATTaGAGTGCTGGGTCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELSLDKH*SAGSGG
Trigger: GCCACCGGACCCAGCACTGCAATGTTTGTCGAGAGA...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp ACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACGAACATAGACAGCCCTaGTTCAGGTCCACCCTTCAA +
Preference number: 4 (lower is better)
Translates to: TILLARNCLPNQFVRKCYEHRQP*FRSTLQ
Trigger: TTGAAGGGTGGACCTGAAGCAGGGCTGTCTATGTTC...GTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACGCTTCCTATCTGCCTTaGTGCTGTCTGCATATTCTG +
Preference number: 4 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYASYLP*CCLHIL
Trigger: CAGAATATGCAGACAGCAGCAAGGCAGATAGGAAGC...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp AGAAGAGATCTCCTGAAGGTGCAAGTTGCAGTTGGCAGGGATTCGGAGAGACACCAGATATTGTCTGTCTaGTTTCCTCATCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: RRDLLKVQVAVGRDSERHQILSV*FPHPEL
Trigger: AAGCTCTGGATGAGGAAAGCAGACAGACAATATCTG...GTGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACCTTCAGGAGATCTCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCACAGAACCAAAGATTaGCACCACCTCCAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: RLFLLHYSSGQELPTQPIHRTKD*HHLQFP
Trigger: GGGAAACTGGAGGTGGTGGCAATCTTTGGTTCTGTG...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp TGCACAAAGAGAAGGAGAACTGAACAAGACAACTCGGAACAAGAACCTTTGGCCATGAGGACAGACACATaGTGGTGGATCTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: CTKRRRTEQDNSEQEPLAMRTDT*WWILLR
Trigger: CCTGAGCAAGATCCACCAGCATGTGTCTGTCCTCAT...GGCCAAAGGTTCTTGTTCCGAGTTGTCTTGTTCAGTTCTCCTTCTCTTTGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp ACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACGGGAATACAGGAAGCTaGACCCATCTCATTGCCACT +
Preference number: 4 (lower is better)
Translates to: TILLARNCLPNQFVRKCYGNTGS*THLIAT
Trigger: AGTGGCAATGAGATGGGTGCAGCTTCCTGTATTCCC...GTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTAGCCCCTGGCCCTGCTaGTTATTTGCAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KSYSQARSHIGWNGANGFSPWPC*LFAGAS
Trigger: AGAGGCCCCTGCAAATAAGCAGCAGGGCCAGGGGCT...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp ACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCTGTGTACAGTTCTGTaGCTGATTCTGAGGTCGCCT +
Preference number: 4 (lower is better)
Translates to: TILLARNCLPNQFVRKCYLCTVL*LILRSP
Trigger: AGGCGACCTCAGAATCAGCCACAGAACTGTACACAG...GTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACAATGCCTTGCAGGTTTaGCAAGGAGATGGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYNALQV*QGDGFS
Trigger: GGAGAAACCATCTCCTTGCCAAACCTGCAAGGCATT...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GAGCTCAAGGCCTGGTTGCTCCATATAGTCTTTTTATTGGGGAAGGGCACAGTTAAACTCTGGACACTCTaGCCTGATTTAGGCTTGCGT +
Preference number: 4 (lower is better)
Translates to: ELKAWLLHIVFLLGKGTVKLWTL*PDLGLR
Trigger: ACGCAAGCCTAAATCAGGCCAGAGTGTCCAGAGTTT...AACTGTGCCCTTCCCCAATAAAAAGACTATATGGAGCAACCAGGCCTTGAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp AGAAGAGATCTCCTGAAGGTGCAAGTTGCAGTTGGCAGGGATTCGGAGAGACACTTGAGAACCAGTGCTTaGAATCTGAATTGTGCACCT +
Preference number: 4 (lower is better)
Translates to: RRDLLKVQVAVGRDSERHLRTSA*NLNCAP
Trigger: AGGTGCACAATTCAGATTCCAAGCACTGGTTCTCAA...GTGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACCTTCAGGAGATCTCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GAGCTCAAGGCCTGGTTGCTCCATATAGTCTTTTTATTGGGGAAGGGCACAGTTTTAAGTGGGTTAGGCTaGTGGAGTTCCAGAGTTGAG +
Preference number: 4 (lower is better)
Translates to: ELKAWLLHIVFLLGKGTVLSGLG*WSSRVE
Trigger: CTCAACTCTGGAACTCCACCAGCCTAACCCACTTAA...AACTGTGCCCTTCCCCAATAAAAAGACTATATGGAGCAACCAGGCCTTGAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACGAAAGGGAATCCACATaGCACAACAGAGCAACAGCA +
Preference number: 4 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYEREST*HNRATA
Trigger: TGCTGTTGCTCTGTTGTGCCATGTGGATTCCCTTTC...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp TGCACAAAGAGAAGGAGAACTGAACAAGACAACTCGGAACAAGAACCTTTGGCCTCTGCCACAGTGGCTTaGGACAGATCAATCGTTTCA +
Preference number: 4 (lower is better)
Translates to: CTKRRRTEQDNSEQEPLASATVA*DRSIVS
Trigger: TGAAACGATTGATCTGTCTCAAGCCACTGTGGCAGA...GGCCAAAGGTTCTTGTTCCGAGTTGTCTTGTTCAGTTCTCCTTCTCTTTGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACATGAGCGATGGCTTCTaGAGCAACATTCCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYMSDGF*SNIPWK
Trigger: TTTCCAAGGAATGTTGCTTCAGAAGCCATCGCTCAT...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp GAGCTCAAGGCCTGGTTGCTCCATATAGTCTTTTTATTGGGGAAGGGCACAGTTAGAGGTGAACTCCCTTaGATCCTTTATAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: ELKAWLLHIVFLLGKGTVRGELP*ILYRSQ
Trigger: CTGGGATCTATAAAGGATTCAAGGGAGTTCACCTCT...AACTGTGCCCTTCCCCAATAAAAAGACTATATGGAGCAACCAGGCCTTGAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACAATTTAGGAGGTAACTaGGGGATTGAGCAAGCCACA +
Preference number: 4 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYNLGGN*GIEQAT
Trigger: TGTGGCTTGCTCAATCCCTCAGTTACCTCCTAAATT...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp TTTTATTGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGGACAGATAGAGCAAAAACGCGGGATGGTGTaGAAAGTAGAGCTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: FYWGRAQLLMKSLGQIEQKRGMV*KVELLS
Trigger: GGACAGAAGCTCTACTTTGCACACCATCCCGCGTTT...TTGCTCTATCTGTCCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp TTTTATTGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGGACAGATAGAGCAAGTCTTTCCGGTTGGGTaGAGCCAGAGTGATTTTTCG +
Preference number: 4 (lower is better)
Translates to: FYWGRAQLLMKSLGQIEQVFPVG*SQSDFS
Trigger: CGAAAAATCACTCTGGCTGCACCCAACCGGAAAGAC...TTGCTCTATCTGTCCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGGCTCTCATGACACACTaGACACTGAGAGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELALMTH*TLRADR
Trigger: CCTGTCAGCTCTCAGTGTGCAGTGTGTCATGAGAGC...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp TGCACAAAGAGAAGGAGAACTGAACAAGACAACTCGGAACAAGAACCTTTGGCCAGGCGGCTATTGTATTaGCCTGGGTGTTCATCTCTT +
Preference number: 4 (lower is better)
Translates to: CTKRRRTEQDNSEQEPLARRLLY*PGCSSL
Trigger: AAGAGATGAACACCCAGGGCAATACAATAGCCGCCT...GGCCAAAGGTTCTTGTTCCGAGTTGTCTTGTTCAGTTCTCCTTCTCTTTGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp GATGGATATTTGGTGTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTGCAAGCCGAGCTAAGTGCTaGATCTGGGCATACTCCTCG +
Preference number: 4 (lower is better)
Translates to: DGYLVFGPTTQAIVLITASRAKC*IWAYSS
Trigger: CGAGGAGTATGCCCAGATGCAGCACTTAGCTCGGCT...TGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAACACCAAATATCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp GAGCTCAAGGCCTGGTTGCTCCATATAGTCTTTTTATTGGGGAAGGGCACAGTTCACCACCTGGACATATaGAGACATACAAGCACACAT +
Preference number: 4 (lower is better)
Translates to: ELKAWLLHIVFLLGKGTVHHLDI*RHTSTH
Trigger: ATGTGTGCTTGTATGTCTGCATATGTCCAGGTGGTG...AACTGTGCCCTTCCCCAATAAAAAGACTATATGGAGCAACCAGGCCTTGAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTCACTCCGTGGAGGCATaGAGGCTAGGATCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: KSYSQARSHIGWNGANGFHSVEA*RLGSRQ
Trigger: CTGCCTTGATCCTAGCCTGCATGCCTCCACGGAGTG...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp TTTTATTGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGGACAGATAGAGCAAGGAGCCAAGTCAGGCTaGAATAGTGAGCTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: FYWGRAQLLMKSLGQIEQGAKSG*NSELAD
Trigger: ATCAGCAAGCTCACTATTGCAGCCTGACTTGGCTCC...TTGCTCTATCTGTCCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACAATTTTGATAAGGCCTaGTCTCTGAATCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYNFDKA*SLNPGL
Trigger: GAGGCCTGGATTCAGAGACCAGGCCTTATCAAAATT...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACACAGACACATGCTGGTaGATCTTGCTCAGGTCATTA +
Preference number: 4 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYTDTCW*ILLRSL
Trigger: TAATGACCTGAGCAAGATCCACCAGCATGTGTCTGT...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCATCCAGGAAAGCTGTaGTGTCATCGTAGAGACCTT +
Preference number: 4 (lower is better)
Translates to: RLFLLHYSSGQELPTQPIHPGKL*CHRRDL
Trigger: AAGGTCTCTACGATGACACCACAGCTTTCCTGGATG...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTACACACAACCAAGTCTaGCTGTCCTGCCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: KSYSQARSHIGWNGANGFTHNQV*LSCLPP
Trigger: AGGGGGCAGGCAGGACAGCCAGACTTGGTTGTGTGT...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp ACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCACCAGAGCACCACCTaGACATATGCAGACATACAA +
Preference number: 4 (lower is better)
Translates to: TILLARNCLPNQFVRKCYHQSTT*TYADIQ
Trigger: TTGTATGTCTGCATATGTCCAGGTGGTGCTCTGGTG...GTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp AGAAGAGATCTCCTGAAGGTGCAAGTTGCAGTTGGCAGGGATTCGGAGAGACACTGGGTTTGGTTGCTTTaGTATTATTTTCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: RRDLLKVQVAVGRDSERHWVWLL*YYFPPL
Trigger: GAGAGGTGGAAAATAATACCAAAGCAACCAAACCCA...GTGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACCTTCAGGAGATCTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR CAA 72 bp CCCAGAGCTAAGACAACTCCCTTGAGGCATCACTTCTaGCTTTGTTTCCAAGTGAGCATATGCAAGAACAGG +
Preference number: 4 (lower is better)
Translates to: PRAKTTPLRHHF*LCFQVSICKNR
Trigger: CCTGTTCTTGCATATGCTCACTTGGAAACAAAGCAAGAAGTGATGCCTCAAGGGAGTTGTCTTAGCTCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR CAA 72 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATaGCCTACCCAACCAATTCGTCAGAAAGTGCTACCA +
Preference number: 4 (lower is better)
Translates to: RLFLLHYSSGQE*PTQPIRQKVLP
Trigger: TGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp GAGCTCAAGGCCTGGTTGCTCCATATAGTCTTTTTATTGGGGAAGGGCACAGTTTTTCCTTCTACCCATTaGTGGGGCATGTTTACTTCA +
Preference number: 4 (lower is better)
Translates to: ELKAWLLHIVFLLGKGTVFPSTH*WGMFTS
Trigger: TGAAGTAAACATGCCCCATCAATGGGTAGAAGGAAA...AACTGTGCCCTTCCCCAATAAAAAGACTATATGGAGCAACCAGGCCTTGAGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACTTCCCACATTTTCATTaGGTTCTCAAAGTCCCGATC +
Preference number: 4 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYFPHFH*VLKVPI
Trigger: GATCGGGACTTTGAGAACTCAATGAAAATGTGGGAA...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp TGCACAAAGAGAAGGAGAACTGAACAAGACAACTCGGAACAAGAACCTTTGGCCTTCAAGGGCTACAGTTaGGATCTCGATGGTGTTAGA +
Preference number: 4 (lower is better)
Translates to: CTKRRRTEQDNSEQEPLAFKGYS*DLDGVR
Trigger: TCTAACACCATCGAGATCTCAACTGTAGCCCTTGAA...GGCCAAAGGTTCTTGTTCCGAGTTGTCTTGTTCAGTTCTCCTTCTCTTTGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTGGAGGACAGGGTAGGTaGAAGGGAATCCACATGGCA +
Preference number: 4 (lower is better)
Translates to: KSYSQARSHIGWNGANGFGGQGR*KGIHMA
Trigger: TGCCATGTGGATTCCCTTTCACCTACCCTGTCCTCC...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGGTGTCCACCGGACATTaGAATAGACATGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELVSTGH*NRHGAG
Trigger: TCCAGCACCATGTCTATTGCAATGTCCGGTGGACAC...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTAAAGGTTTCTACAGCTaGTTTCTGCCACAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: RLFLLHYSSGQELPTQPIKGFYS*FLPQWL
Trigger: AAGCCACTGTGGCAGAAAGCAGCTGTAGAAACCTTT...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp GAGCTCAAGGCCTGGTTGCTCCATATAGTCTTTTTATTGGGGAAGGGCACAGTTCTGGAGTACCAACAATaGATTCCAACAAGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: ELKAWLLHIVFLLGKGTVLEYQQ*IPTRKG
Trigger: CCCTTTTCTTGTTGGAATGCATTGTTGGTACTCCAG...AACTGTGCCCTTCCCCAATAAAAAGACTATATGGAGCAACCAGGCCTTGAGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp TGCACAAAGAGAAGGAGAACTGAACAAGACAACTCGGAACAAGAACCTTTGGCCCATGTTTACTTCATCTaGAGGCAGAAGGAGGTCATC +
Preference number: 4 (lower is better)
Translates to: CTKRRRTEQDNSEQEPLAHVYFI*RQKEVI
Trigger: GATGACCTCCTTCTGCCTGCAGATGAAGTAAACATG...GGCCAAAGGTTCTTGTTCCGAGTTGTCTTGTTCAGTTCTCCTTCTCTTTGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp TGCACAAAGAGAAGGAGAACTGAACAAGACAACTCGGAACAAGAACCTTTGGCCCACCACAAACCAGAATaGGAAAGCGAGCAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: CTKRRRTEQDNSEQEPLAHHKPE*ESEQSS
Trigger: AGAACTTTGCTCGCTTTCGCATTCTGGTTTGTGGTG...GGCCAAAGGTTCTTGTTCCGAGTTGTCTTGTTCAGTTCTCCTTCTCTTTGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTACACAAGAATCTGGTTaGGATGATCATCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: RLFLLHYSSGQELPTQPITQESG*DDHLCG
Trigger: CCCACAGAGATGATCATCGCAACCAGATTCTTGTGT...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGGAAGGGCTTCCTATCTaGCTTGCTGCTGTCTGCATA +
Preference number: 4 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELEGLPI*LAAVCI
Trigger: TATGCAGACAGCAGCAAGGCAGATAGGAAGCCCTTC...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTTTTCCCATCATCGATTaGAGGAGCCTCATATTCCGT +
Preference number: 4 (lower is better)
Translates to: RLFLLHYSSGQELPTQPIFPIID*RSLIFR
Trigger: ACGGAATATGAGGCTCCTGCAATCGATGATGGGAAA...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp ACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCATCTTCACGATGTCTaGGGTGCCATAAATTGCCAA +
Preference number: 4 (lower is better)
Translates to: TILLARNCLPNQFVRKCYHLHDV*GAINCQ
Trigger: TTGGCAATTTATGGCACCGCAGACATCGTGAAGATG...GTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTAGGATCATCACCCTCTaGTTCATCTTCACGATGTCT +
Preference number: 4 (lower is better)
Translates to: RLFLLHYSSGQELPTQPIRIITL*FIFTMS
Trigger: AGACATCGTGAAGATGAAGCAGAGGGTGATGATCCT...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp AGAAGAGATCTCCTGAAGGTGCAAGTTGCAGTTGGCAGGGATTCGGAGAGACACCAATTCGTCAGAAAGTaGTACCAAAGATACAACCAA +
Preference number: 4 (lower is better)
Translates to: RRDLLKVQVAVGRDSERHQFVRK*YQRYNQ
Trigger: TTGGTTGTATCTTTGGTAGCACTTTCTGACGAATTG...GTGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACCTTCAGGAGATCTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GAGAGAGAGAGAGGTTACCATATCTACAAAAAGAGATTTCACATGGTCATCTTACTCTGGTATGGGTTCTaGCGAAGCCTCGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: ERERGYHIYKKRFHMVILLWYGF*RSLGEQ
Trigger: CTGCTCTCCGAGGCTTCGCCAGAACCCATACCAGAG...TAAGATGACCATGTGAAATCTCTTTTTGTAGATATGGTAACCTCTCTCTCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GAGAGAGAGAGAGGTTACCATATCTACAAAAAGAGATTTCACATGGTCATCTTAACTTGGACGGAACTCTaGAGCCGCCTCAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: ERERGYHIYKKRFHMVILTWTEL*SRLRAE
Trigger: TTCTGCCCTGAGGCGGCTCCAGAGTTCCGTCCAAGT...TAAGATGACCATGTGAAATCTCTTTTTGTAGATATGGTAACCTCTCTCTCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GAGAGAGAGAGAGGTTACCATATCTACAAAAAGAGATTTCACATGGTCATCTTATCTGGACCACGACATTaGCGTTCTGGGCGATGGCGA +
Preference number: 4 (lower is better)
Translates to: ERERGYHIYKKRFHMVILSGPRH*RSGRWR
Trigger: TCGCCATCGCCCAGAACGCCAATGTCGTGGTCCAGA...TAAGATGACCATGTGAAATCTCTTTTTGTAGATATGGTAACCTCTCTCTCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTATTGGCCATCGCCTTTaGGGTCGCTTAGAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: KSYSQARSHIGWNGANGFIGHRL*GRLEQW
Trigger: CCACTGCTCTAAGCGACCCCAAAGGCGATGGCCAAT...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTGCAGATTCTAAGTGTTaGATGGCAGCAGCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: RLFLLHYSSGQELPTQPIADSKC*MAAASN
Trigger: ATTTGAGGCTGCTGCCATCCAACACTTAGAATCTGC...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp AGCTATCTTCTCCCAGGACTTCCTTCTGTAGTCCTAAATTTGCTCATTTGGACAACGAGAACGGCGTCGTaGGCTTGTCTGGTTAATATC +
Preference number: 4 (lower is better)
Translates to: SYLLPGLPSVVLNLLIWTTRTAS*ACLVNI
Trigger: GATATTAACCAGACAAGCCCACGACGCCGTTCTCGT...TGTCCAAATGAGCAAATTTAGGACTACAGAAGGAAGTCCTGGGAGAAGATAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp ACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACTTGGAGGGTCTTTCTTaGTGGTGCTCATGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: TILLARNCLPNQFVRKCYLEGLS*WCSCLF
Trigger: GAACAAACATGAGCACCACCAAGAAAGACCCTCCAA...GTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp AGCTATCTTCTCCCAGGACTTCCTTCTGTAGTCCTAAATTTGCTCATTTGGACAAGTGGGTTAGGCTGGTaGAGTTCCAGAGTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: SYLLPGLPSVVLNLLIWTSGLGW*SSRVEN
Trigger: GTTCTCAACTCTGGAACTCCACCAGCCTAACCCACT...TGTCCAAATGAGCAAATTTAGGACTACAGAAGGAAGTCCTGGGAGAAGATAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GATGGATATTTGGTGTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTGCATGGAGCACAGGTGGCTaGTTTAAGTGGGTTAGGCTG +
Preference number: 4 (lower is better)
Translates to: DGYLVFGPTTQAIVLITAWSTGG*FKWVRL
Trigger: CAGCCTAACCCACTTAAACCAGCCACCTGTGCTCCA...TGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAACACCAAATATCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACAATAAGTCGAACACTTaGGATGGGTTAAGGTATTGC +
Preference number: 4 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYNKSNT*DGLRYC
Trigger: GCAATACCTTAACCCATCTCAAGTGTTCGACTTATT...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp AGCTATCTTCTCCCAGGACTTCCTTCTGTAGTCCTAAATTTGCTCATTTGGACAGGTCTATTTGAGGAATaGAGGGCTTCCTATCTGCCT +
Preference number: 4 (lower is better)
Translates to: SYLLPGLPSVVLNLLIWTGLFEE*RASYLP
Trigger: AGGCAGATAGGAAGCCCTTCATTCCTCAAATAGACC...TGTCCAAATGAGCAAATTTAGGACTACAGAAGGAAGTCCTGGGAGAAGATAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp TTTTATTGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGGACAGATAGAGCAAAACTCCCTGAAGAGGTaGACTCCCTTGAATCCTTTA +
Preference number: 4 (lower is better)
Translates to: FYWGRAQLLMKSLGQIEQNSLKR*TPLNPL
Trigger: TAAAGGATTCAAGGGAGTTCACCTCTTCAGGGAGTT...TTGCTCTATCTGTCCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACACAATGTATTCCACTTaGAGTCTTTGCTTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYTMYST*SLCLLS
Trigger: TGAGAGCAAGCAAAGACTGCAAGTGGAATACATTGT...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp ACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACGAAGTCTTTGATAACTaGCACAGCTCTCATGACACA +
Preference number: 4 (lower is better)
Translates to: TILLARNCLPNQFVRKCYEVFDN*HSSHDT
Trigger: TGTGTCATGAGAGCTGTGGCAGTTATCAAAGACTTC...GTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGAGCACTACAATGCCTTaGAGGTTTGGCAAGGAGATG +
Preference number: 4 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELSTTMP*RFGKEM
Trigger: CATCTCCTTGCCAAACCTGCAAGGCATTGTAGTGCT...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp GAGAGAGAGAGAGGTTACCATATCTACAAAAAGAGATTTCACATGGTCATCTTAGCCTCCCCATCCACCTaGACTGGGATACCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: ERERGYHIYKKRFHMVILASPST*TGIPSS
Trigger: TGAAGAAGGTATCCCAGTGCAGGTGGATGGGGAGGC...TAAGATGACCATGTGAAATCTCTTTTTGTAGATATGGTAACCTCTCTCTCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTGCAGGTGTCAATGCATaGAGCCATAGAGGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: KSYSQARSHIGWNGANGFAGVNA*SHRGAK
Trigger: CTTGGCTCCTCTATGGCTGCATGCATTGACACCTGC...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGGGTTTGGCAAGGAGATaGTTTCTCCATCACACTCCA +
Preference number: 4 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELGLARR*FLHHTP
Trigger: TGGAGTGTGATGGAGAAACCATCTCCTTGCCAAACC...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp TTTTATTGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGGACAGATAGAGCAATCTCTTGTCAGCATCTaGGCAGCGTTCTTGTATCTA +
Preference number: 4 (lower is better)
Translates to: FYWGRAQLLMKSLGQIEQSLVSI*AAFLYL
Trigger: TAGATACAAGAACGCTGCCCAGATGCTGACAAGAGA...TTGCTCTATCTGTCCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp ACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACGAAGAAAATGCAACTTaGTTCCCACTCTGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: TILLARNCLPNQFVRKCYEENAT*FPLCEC
Trigger: ACACTCACAGAGTGGGAACCAAGTTGCATTTTCTTC...GTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp AGAAGAGATCTCCTGAAGGTGCAAGTTGCAGTTGGCAGGGATTCGGAGAGACACAGTAAGCACAAGAGATaGAGTCTTATTACAGTTTAC +
Preference number: 4 (lower is better)
Translates to: RRDLLKVQVAVGRDSERHSKHKR*SLITVY
Trigger: GTAAACTGTAATAAGACTCCATCTCTTGTGCTTACT...GTGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACCTTCAGGAGATCTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp ACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACGCAAGAACAGGTGCTTaGCAAGCTATCTTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: TILLARNCLPNQFVRKCYARTGA*QAIFLF
Trigger: AAAAAGGAAGATAGCTTGCCAAGCACCTGTTCTTGC...GTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACCAAACCCTAGAGCTTTaGGTCTTAATGATGTCTGAA +
Preference number: 4 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYQTLEL*VLMMSE
Trigger: TTCAGACATCATTAAGACCCAAAGCTCTAGGGTTTG...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR CAA 72 bp CAAGAAATAGGGCAGTTGGTAGAGGTGTATGTGTTATaGTTATGTAGAGTAAGGGGGAGTGGGAAGGGATTC +
Preference number: 4 (lower is better)
Translates to: QEIGQLVEVYVL*LCRVRGSGKGF
Trigger: GAATCCCTTCCCACTCCCCCTTACTCTACATAACAATAACACATACACCTCTACCAACTGCCCTATTTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
3UTR CAA 72 bp GAGAAGGGGACCCATAACTGTTTACCTCCTATAGTATaGACACCAGAAGCAGTTGGTGGCAGTTCAAATGTA +
Preference number: 4 (lower is better)
Translates to: EKGTHNCLPPIV*TPEAVGGSSNV
Trigger: TACATTTGAACTGCCACCAACTGCTTCTGGTGTCAATACTATAGGAGGTAAACAGTTATGGGTCCCCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTTCACGATGTCTGCGGTaGCATAAATTGCCAATAAAA +
Preference number: 4 (lower is better)
Translates to: RLFLLHYSSGQELPTQPISRCLR*HKLPIK
Trigger: TTTTATTGGCAATTTATGGCACCGCAGACATCGTGA...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp AGCTATCTTCTCCCAGGACTTCCTTCTGTAGTCCTAAATTTGCTCATTTGGACAGCCCTGCTTAGTCACTaGCAAGATAAAGCTATCTTC +
Preference number: 4 (lower is better)
Translates to: SYLLPGLPSVVLNLLIWTALLSH*QDKAIF
Trigger: GAAGATAGCTTTATCTTGGCAGTGACTAAGCAGGGC...TGTCCAAATGAGCAAATTTAGGACTACAGAAGGAAGTCCTGGGAGAAGATAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp TTTTATTGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGGACAGATAGAGCAATATAAGACACAGCCCTaGTTAGTCACTGCCAAGATA +
Preference number: 4 (lower is better)
Translates to: FYWGRAQLLMKSLGQIEQYKTQP*LVTAKI
Trigger: TATCTTGGCAGTGACTAAGCAGGGCTGTGTCTTATA...TTGCTCTATCTGTCCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp AGCTATCTTCTCCCAGGACTTCCTTCTGTAGTCCTAAATTTGCTCATTTGGACAAGCAGCCTCAAATCGTaGTACATCCATTTCAACCTG +
Preference number: 4 (lower is better)
Translates to: SYLLPGLPSVVLNLLIWTSSLKS*YIHFNL
Trigger: CAGGTTGAAATGGATGTACCACGATTTGAGGCTGCT...TGTCCAAATGAGCAAATTTAGGACTACAGAAGGAAGTCCTGGGAGAAGATAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGGCTCCAACTTGCACTTaGCTATGTGGTCTATTTGAG +
Preference number: 4 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELAPTCT*LCGLFE
Trigger: CTCAAATAGACCACATAGCCAAGTGCAAGTTGGAGC...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GAGAGAGAGAGAGGTTACCATATCTACAAAAAGAGATTTCACATGGTCATCTTAGATTTCTGGAGACTCTaGGCCTTTGTAGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ERERGYHIYKKRFHMVILDFWRL*AFVASS
Trigger: GGAGCTGGCTACAAAGGCCCAGAGTCTCCAGAAATC...TAAGATGACCATGTGAAATCTCTTTTTGTAGATATGGTAACCTCTCTCTCTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GAGAGAGAGAGAGGTTACCATATCTACAAAAAGAGATTTCACATGGTCATCTTACCCATCCACCTGCACTaGGATACCTTCTTCACCATC +
Preference number: 4 (lower is better)
Translates to: ERERGYHIYKKRFHMVILPIHLH*DTFFTI
Trigger: GATGGTGAAGAAGGTATCCCAGTGCAGGTGGATGGG...TAAGATGACCATGTGAAATCTCTTTTTGTAGATATGGTAACCTCTCTCTCTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GAGCTCAAGGCCTGGTTGCTCCATATAGTCTTTTTATTGGGGAAGGGCACAGTTATTAGTGAAAAGAATTaGAGGGTCTTTCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: ELKAWLLHIVFLLGKGTVISEKN*RVFLGG
Trigger: ACCACCAAGAAAGACCCTCCAATTCTTTTCACTAAT...AACTGTGCCCTTCCCCAATAAAAAGACTATATGGAGCAACCAGGCCTTGAGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GATGGATATTTGGTGTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTGCACTTAACCTGCTCTTATaGACACAGCACAGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: DGYLVFGPTTQAIVLITALNLLL*TQHRAF
Trigger: AAAGGCCCTGTGCTGTGTCCATAAGAGCAGGTTAAG...TGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAACACCAAATATCCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp AGCTATCTTCTCCCAGGACTTCCTTCTGTAGTCCTAAATTTGCTCATTTGGACAAAAATCTTCCACAGCTaGACACAAGAATCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: SYLLPGLPSVVLNLLIWTKIFHS*TQESGC
Trigger: GCAACCAGATTCTTGTGTTCAGCTGTGGAAGATTTT...TGTCCAAATGAGCAAATTTAGGACTACAGAAGGAAGTCCTGGGAGAAGATAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp TTTTATTGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGGACAGATAGAGCAAGGTGTAAAATGTAAGTaGTCCAAGTTAAGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: FYWGRAQLLMKSLGQIEQGVKCK*SKLRLS
Trigger: GGACAACCTTAACTTGGATCACTTACATTTTACACC...TTGCTCTATCTGTCCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp GATGGATATTTGGTGTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTGCACCAGTGCTTGGAATCTaGATTGTGCACCTCAATGAA +
Preference number: 4 (lower is better)
Translates to: DGYLVFGPTTQAIVLITAPVLGI*IVHLNE
Trigger: TTCATTGAGGTGCACAATTCAGATTCCAAGCACTGG...TGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAACACCAAATATCCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp GATGGATATTTGGTGTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTGCACTAAGACAACTCCCTTaGGGCATCACTTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: DGYLVFGPTTQAIVLITALRQLP*GITSCF
Trigger: AAAGCAAGAAGTGATGCCTCAAGGGAGTTGTCTTAG...TGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAACACCAAATATCCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTGGGTTACAGATTCACTaGCAAATAGACAAATGCAAT +
Preference number: 4 (lower is better)
Translates to: RLFLLHYSSGQELPTQPIGLQIH*QIDKCN
Trigger: ATTGCATTTGTCTATTTGTCAGTGAATCTGTAACCC...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp TTTTATTGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGGACAGATAGAGCAATGTAGTTGCTCAAGATaGACAAAGAGAAGGAGAACT +
Preference number: 4 (lower is better)
Translates to: FYWGRAQLLMKSLGQIEQCSCSR*TKRRRT
Trigger: AGTTCTCCTTCTCTTTGTGCATCTTGAGCAACTACA...TTGCTCTATCTGTCCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GATGGATATTTGGTGTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTGCATCTCTGTGGGGTACTTaGCCTTCAGGATTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: DGYLVFGPTTQAIVLITASLWGT*PSGFCS
Trigger: TGAACAAAATCCTGAAGGCCAAGTACCCCACAGAGA...TGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAACACCAAATATCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp TTTTATTGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGGACAGATAGAGCAACTCTGGAACAAAGATTaGATTCATCCAGTCAATCTC +
Preference number: 4 (lower is better)
Translates to: FYWGRAQLLMKSLGQIEQLWNKD*IHPVNL
Trigger: GAGATTGACTGGATGAATCCAATCTTTGTTCCAGAG...TTGCTCTATCTGTCCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp AGCTATCTTCTCCCAGGACTTCCTTCTGTAGTCCTAAATTTGCTCATTTGGACAAAAGCACACAATCTGTaGGATTTCACTTTGCACACT +
Preference number: 4 (lower is better)
Translates to: SYLLPGLPSVVLNLLIWTKAHNL*DFTLHT
Trigger: AGTGTGCAAAGTGAAATCTCACAGATTGTGTGCTTT...TGTCCAAATGAGCAAATTTAGGACTACAGAAGGAAGTCCTGGGAGAAGATAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp GAGAGAGAGAGAGGTTACCATATCTACAAAAAGAGATTTCACATGGTCATCTTACTAGAAGAGATCTCCTaGAGGTGCAAGTTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: ERERGYHIYKKRFHMVILLEEIS*RCKLQL
Trigger: CAACTGCAACTTGCACCTTCAGGAGATCTCTTCTAG...TAAGATGACCATGTGAAATCTCTTTTTGTAGATATGGTAACCTCTCTCTCTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp GATGGATATTTGGTGTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTGCACCACCTCTAAGACGCTaGAAATGCACCAAAAGATTT +
Preference number: 4 (lower is better)
Translates to: DGYLVFGPTTQAIVLITAPPLRR*KCTKRF
Trigger: AAATCTTTTGGTGCATTTTCAGCGTCTTAGAGGTGG...TGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAACACCAAATATCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGGATGGGTTAAGGTATTaGTTGAATTTTCGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELDGLRY*LNFRRK
Trigger: CTTCCTCCGAAAATTCAAGCAATACCTTAACCCATC...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTCCATCACACTCCAAATaGACTCGTTCTTCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: KSYSQARSHIGWNGANGFPSHSK*TRSSSF
Trigger: GAAACTGGAAGAACGAGTGCATTTGGAGTGTGATGG...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp AGCTATCTTCTCCCAGGACTTCCTTCTGTAGTCCTAAATTTGCTCATTTGGACACTACGGCATCATTTCTaGTTAGAGTTTCAATGGGAA +
Preference number: 4 (lower is better)
Translates to: SYLLPGLPSVVLNLLIWTLRHHF*LEFQWE
Trigger: TTCCCATTGAAACTCTAAGCAGAAATGATGCCGTAG...TGTCCAAATGAGCAAATTTAGGACTACAGAAGGAAGTCCTGGGAGAAGATAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR GCA 90 bp TGCACAAAGAGAAGGAGAACTGAACAAGACAACTCGGAACAAGAACCTTTGGCCCAAAGACCTAATTATTaGAGCAAAGTAAGCACAAGA +
Preference number: 4 (lower is better)
Translates to: CTKRRRTEQDNSEQEPLAQRPNY*SKVSTR
Trigger: TCTTGTGCTTACTTTGCTGCAATAATTAGGTCTTTG...GGCCAAAGGTTCTTGTTCCGAGTTGTCTTGTTCAGTTCTCCTTCTCTTTGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTATGACTGATGAGCGATaGCTTCTGAAGCAACATTCC +
Preference number: 4 (lower is better)
Translates to: KSYSQARSHIGWNGANGFMTDER*LLKQHS
Trigger: GGAATGTTGCTTCAGAAGCCATCGCTCATCAGTCAT...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp AGCTATCTTCTCCCAGGACTTCCTTCTGTAGTCCTAAATTTGCTCATTTGGACAGTCGAACACTTGAGATaGGTTAAGGTATTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: SYLLPGLPSVVLNLLIWTVEHLR*VKVLLE
Trigger: TTCAAGCAATACCTTAACCCATCTCAAGTGTTCGAC...TGTCCAAATGAGCAAATTTAGGACTACAGAAGGAAGTCCTGGGAGAAGATAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GATGGATATTTGGTGTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTGCAAGTTTCAAGGATTTCTaGAGACTCTGGGCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: DGYLVFGPTTQAIVLITASFKDF*RLWAFV
Trigger: TACAAAGGCCCAGAGTCTCCAGAAATCCTTGAAACT...TGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAACACCAAATATCCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp AGCTATCTTCTCCCAGGACTTCCTTCTGTAGTCCTAAATTTGCTCATTTGGACATTGCCAATAAAACTCTaGACACTCTGGCCTGATTTA +
Preference number: 4 (lower is better)
Translates to: SYLLPGLPSVVLNLLIWTLPIKL*TLWPDL
Trigger: TAAATCAGGCCAGAGTGTCCAGAGTTTTATTGGCAA...TGTCCAAATGAGCAAATTTAGGACTACAGAAGGAAGTCCTGGGAGAAGATAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GATGGATATTTGGTGTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTGCACCTTCTTTAGGGCATTaGTGTTTTTGTTCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: DGYLVFGPTTQAIVLITAPSLGH*CFCSPF
Trigger: GAAAGGGGAACAAAAACACCAATGCCCTAAAGAAGG...TGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAACACCAAATATCCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTAACCTCTCTGGGCATTaGGGTTTGATTAGATTTGCC +
Preference number: 4 (lower is better)
Translates to: KSYSQARSHIGWNGANGFNLSGH*GLIRFA
Trigger: GGCAAATCTAATCAAACCCCAATGCCCAGAGAGGTT...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp GAGAGAGAGAGAGGTTACCATATCTACAAAAAGAGATTTCACATGGTCATCTTACATCGATCAGGACACTaGGCCTATCATACATTAAGT +
Preference number: 4 (lower is better)
Translates to: ERERGYHIYKKRFHMVILHRSGH*AYHTLS
Trigger: ACTTAATGTATGATAGGCTCAGTGTCCTGATCGATG...TAAGATGACCATGTGAAATCTCTTTTTGTAGATATGGTAACCTCTCTCTCTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GATGGATATTTGGTGTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTGCAATAACACAAAAACTGTaGCAAAGGTTTCTACAGCTG +
Preference number: 4 (lower is better)
Translates to: DGYLVFGPTTQAIVLITAITQKL*QRFLQL
Trigger: CAGCTGTAGAAACCTTTGCCACAGTTTTTGTGTTAT...TGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAACACCAAATATCCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GAGAGAGAGAGAGGTTACCATATCTACAAAAAGAGATTTCACATGGTCATCTTACTTCTTCACCATCAATaGTTATCATCACCTCATGGC +
Preference number: 4 (lower is better)
Translates to: ERERGYHIYKKRFHMVILLLHHQ*LSSPHG
Trigger: GCCATGAGGTGATGATAACCATTGATGGTGAAGAAG...TAAGATGACCATGTGAAATCTCTTTTTGTAGATATGGTAACCTCTCTCTCTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GAGAGAGAGAGAGGTTACCATATCTACAAAAAGAGATTTCACATGGTCATCTTATGCTTAGAGTTTCAATaGGAATACAGGAAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: ERERGYHIYKKRFHMVILCLEFQ*EYRKLH
Trigger: GTGCAGCTTCCTGTATTCCCATTGAAACTCTAAGCA...TAAGATGACCATGTGAAATCTCTTTTTGTAGATATGGTAACCTCTCTCTCTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GATGGATATTTGGTGTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTGCATCTAATACCTCCTCCTaGGAAGAAAGACTAATAACA +
Preference number: 4 (lower is better)
Translates to: DGYLVFGPTTQAIVLITASNTSS*EERLIT
Trigger: TGTTATTAGTCTTTCTTCCCAGGAGGAGGTATTAGA...TGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAACACCAAATATCCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTAGGTCTCATATAGGATaGAATGGTGCTAATGGGTTT +
Preference number: 4 (lower is better)
Translates to: KSYSQARSHIGWNGANGFRSHIG*NGANGF
Trigger: AAACCCATTAGCACCATTCCATCCTATATGAGACCT...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR TCA 90 bp GAGAGAGAGAGAGGTTACCATATCTACAAAAAGAGATTTCACATGGTCATCTTAGAATTCTCAATGTTGTaGGTTCTTCCAGCTTTCAAG +
Preference number: 4 (lower is better)
Translates to: ERERGYHIYKKRFHMVILEFSML*VLPAFK
Trigger: CTTGAAAGCTGGAAGAACTCACAACATTGAGAATTC...TAAGATGACCATGTGAAATCTCTTTTTGTAGATATGGTAACCTCTCTCTCTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GATGGATATTTGGTGTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTGCACGAAGATTTTTCCTCTaGAACAAAGATTGGATTCAT +
Preference number: 4 (lower is better)
Translates to: DGYLVFGPTTQAIVLITARRFFL*NKDWIH
Trigger: ATGAATCCAATCTTTGTTCCAGAGGAAAAATCTTCG...TGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAACACCAAATATCCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GAGAGAGAGAGAGGTTACCATATCTACAAAAAGAGATTTCACATGGTCATCTTACCTGACTGTTTCTTCTaGCCCAGTTTTATTAAGGTA +
Preference number: 4 (lower is better)
Translates to: ERERGYHIYKKRFHMVILPDCFF*PSFIKV
Trigger: TACCTTAATAAAACTGGGCCAGAAGAAACAGTCAGG...TAAGATGACCATGTGAAATCTCTTTTTGTAGATATGGTAACCTCTCTCTCTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp GAGAGAGAGAGAGGTTACCATATCTACAAAAAGAGATTTCACATGGTCATCTTAATATTTTCTTTATTCTaGACCACGACATTGGCGTTC +
Preference number: 4 (lower is better)
Translates to: ERERGYHIYKKRFHMVILIFSLF*TTTLAF
Trigger: GAACGCCAATGTCGTGGTCCAGAATAAAGAAAATAT...TAAGATGACCATGTGAAATCTCTTTTTGTAGATATGGTAACCTCTCTCTCTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CCA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTAGCTATCTTCCTTTTTaGGAAACTACTGGTAACTTA +
Preference number: 4 (lower is better)
Translates to: KSYSQARSHIGWNGANGFSYLPF*ETTGNL
Trigger: TAAGTTACCAGTAGTTTCCCAAAAAGGAAGATAGCT...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS TCA 90 bp AGCTCCGCGGTCCATGGCCGCACACCGCTTCAGGTCTGGGCAGCCTaGGTCCCTAAGCCTGGAAGGCTAAAGTACCCTCGGGCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: SSAVHGRTPLQVWAA*VPKPGRLKYPRAPR
Trigger: GCGGGGCGCCCGAGGGTACTTTAGCCTTCCAGGCTTAGGGACTCAGGCTGCCCAGACCTGAAGCGGTGTGCGGCCATGGACCGCGGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CCA 90 bp CCGGCTCTGTGGCAGGTTCTGGGGCCGGTTCTGAGGCCGGCTCTGTaGCTGGTTCTGGGGTCGGTTCTGTGTACAGTTCTGTGGCTGATT +
Preference number: 5 (lower is better)
Translates to: PALWQVLGPVLRPAL*LVLGSVLCTVLWLI
Trigger: AATCAGCCACAGAACTGTACACAGAACCGACCCCAGAACCAGCCACAGAGCCGGCCTCAGAACCGGCCCCAGAACCTGCCACAGAGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CCA 90 bp CCGGCTCTGTGGCTGGTTCTGGGGTCGGTTCTGTGTACAGTTCTGTaGCTGATTCTGAGGTCGCCTCTGGACAGGGACCTGGAGCAAGCT +
Preference number: 5 (lower is better)
Translates to: PALWLVLGSVLCTVL*LILRSPLDRDLEQA
Trigger: AGCTTGCTCCAGGTCCCTGTCCAGAGGCGACCTCAGAATCAGCCACAGAACTGTACACAGAACCGACCCCAGAACCAGCCACAGAGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp TGCAGGCTAGGATCAAGGCAGCAGGAGGGGAGCCTGTATGGTTGCCATGAGGGGGTAGCCAGCTCCAACTaGCACTTGGCTATGTGGTCT +
Preference number: 5 (lower is better)
Translates to: CRLGSRQQEGSLYGCHEGVASSN*HLAMWS
Trigger: AGACCACATAGCCAAGTGCAAGTTGGAGCTGGCTAC...CCCCTCATGGCAACCATACAGGCTCCCCTCCTGCTGCCTTGATCCTAGCCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS GCA 90 bp GATGGCGAGGTCTTTAGACCTCTCTCTCGAGTGTCCACCGGACATTaGAATAGACATGGTGCTGGACTTGGACGGAACTCTGGAGCCGCC +
Preference number: 5 (lower is better)
Translates to: DGEVFRPLSRVSTGH*NRHGAGLGRNSGAA
Trigger: GGCGGCTCCAGAGTTCCGTCCAAGTCCAGCACCATGTCTATTGCAATGTCCGGTGGACACTCGAGAGAGAGGTCTAAAGACCTCGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp TGCAGGCTAGGATCAAGGCAGCAGGAGGGGAGCCTGTATGGTTGCCATGAGGGGTCCGTGGTTGCTGTGTaGCTTCCCCAGAAGTTGATA +
Preference number: 5 (lower is better)
Translates to: CRLGSRQQEGSLYGCHEGSVVAV*LPQKLI
Trigger: TATCAACTTCTGGGGAAGCAACACAGCAACCACGGA...CCCCTCATGGCAACCATACAGGCTCCCCTCCTGCTGCCTTGATCCTAGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp TGCAGGCTAGGATCAAGGCAGCAGGAGGGGAGCCTGTATGGTTGCCATGAGGGGAGATTTGAAGGTGACTaGAGGACTGACCCAACAGCC +
Preference number: 5 (lower is better)
Translates to: CRLGSRQQEGSLYGCHEGRFEGD*RTDPTA
Trigger: GGCTGTTGGGTCAGTCCTCAAGTCACCTTCAAATCT...CCCCTCATGGCAACCATACAGGCTCCCCTCCTGCTGCCTTGATCCTAGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp TGCAGGCTAGGATCAAGGCAGCAGGAGGGGAGCCTGTATGGTTGCCATGAGGGGAAGCGAGCAAAGTTCTaGAACATAGACAGCCCTGCT +
Preference number: 5 (lower is better)
Translates to: CRLGSRQQEGSLYGCHEGKRAKF*NIDSPA
Trigger: AGCAGGGCTGTCTATGTTCAAGAACTTTGCTCGCTT...CCCCTCATGGCAACCATACAGGCTCCCCTCCTGCTGCCTTGATCCTAGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS TCA 90 bp GATCCTCACACTAGCCTGCTCCACTCTGTTGAGGATGTCCAGAGGTaGCTTGCTTTTGTTCCAGAATGCACCCCAGCCCAGAACACGAGC +
Preference number: 5 (lower is better)
Translates to: DPHTSLLHSVEDVQR*LAFVPECTPAQNTS
Trigger: GCTCGTGTTCTGGGCTGGGGTGCATTCTGGAACAAAAGCAAGTCACCTCTGGACATCCTCAACAGAGTGGAGCAGGCTAGTGTGAGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp AGAAGAGATCTCCTGAAGGTGCAAGTTGCAGTTGGCAGGGATTCGGAGAGACACCAAAGTCCCGATCTCTaGTCAGCATCTGGGCAGCGT +
Preference number: 5 (lower is better)
Translates to: RRDLLKVQVAVGRDSERHQSPDL*SASGQR
Trigger: ACGCTGCCCAGATGCTGACAAGAGATCGGGACTTTG...GTGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACCTTCAGGAGATCTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp ACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACGACATGGTGCTGGACTaGGACGGAACTCTGGAGCCG +
Preference number: 5 (lower is better)
Translates to: TILLARNCLPNQFVRKCYDMVLD*DGTLEP
Trigger: CGGCTCCAGAGTTCCGTCCAAGTCCAGCACCATGTC...GTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp TGCAGGCTAGGATCAAGGCAGCAGGAGGGGAGCCTGTATGGTTGCCATGAGGGGATCTGGGCAGCGTTCTaGTATCTAATTTTGATAAGG +
Preference number: 5 (lower is better)
Translates to: CRLGSRQQEGSLYGCHEGIWAAF*YLILIR
Trigger: CCTTATCAAAATTAGATACAAGAACGCTGCCCAGAT...CCCCTCATGGCAACCATACAGGCTCCCCTCCTGCTGCCTTGATCCTAGCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CCA 90 bp CCTTTGGGGTCGCTTAGAGCAGTGGGAGGAATGACTGATGAGCGATaGCTTCTGAAGCAACATTCCTTGGAAAACCGTCTCCTACAGTCA +
Preference number: 5 (lower is better)
Translates to: PLGSLRAVGGMTDER*LLKQHSLENRLLQS
Trigger: TGACTGTAGGAGACGGTTTTCCAAGGAATGTTGCTTCAGAAGCCATCGCTCATCAGTCATTCCTCCCACTGCTCTAAGCGACCCCAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp AGAAGAGATCTCCTGAAGGTGCAAGTTGCAGTTGGCAGGGATTCGGAGAGACACCAGGCAGCGGAAGTCTaGAAGTCTTTGATAACTGCC +
Preference number: 5 (lower is better)
Translates to: RRDLLKVQVAVGRDSERHQAAEV*KSLITA
Trigger: GGCAGTTATCAAAGACTTCAAGACTTCCGCTGCCTG...GTGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACCTTCAGGAGATCTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp TGCAGGCTAGGATCAAGGCAGCAGGAGGGGAGCCTGTATGGTTGCCATGAGGGGATCTCAGATAGCTTTTaGAACTCCTTATTCATGGCA +
Preference number: 5 (lower is better)
Translates to: CRLGSRQQEGSLYGCHEGISDSF*NSLFMA
Trigger: TGCCATGAATAAGGAGTTCAAAAAGCTATCTGAGAT...CCCCTCATGGCAACCATACAGGCTCCCCTCCTGCTGCCTTGATCCTAGCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp AGCTATCTTCTCCCAGGACTTCCTTCTGTAGTCCTAAATTTGCTCATTTGGACATTCTGGACCACGACATaGGCGTTCTGGGCGATGGCG +
Preference number: 5 (lower is better)
Translates to: SYLLPGLPSVVLNLLIWTFWTTT*AFWAMA
Trigger: CGCCATCGCCCAGAACGCCAATGTCGTGGTCCAGAA...TGTCCAAATGAGCAAATTTAGGACTACAGAAGGAAGTCCTGGGAGAAGATAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp GAGCTCAAGGCCTGGTTGCTCCATATAGTCTTTTTATTGGGGAAGGGCACAGTTCCTCATATTCCGTGGTaGCTGTGTTGCTTCCCCAGA +
Preference number: 5 (lower is better)
Translates to: ELKAWLLHIVFLLGKGTVPHIPW*LCCFPR
Trigger: TCTGGGGAAGCAACACAGCAACCACGGAATATGAGG...AACTGTGCCCTTCCCCAATAAAAAGACTATATGGAGCAACCAGGCCTTGAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp TGCACAAAGAGAAGGAGAACTGAACAAGACAACTCGGAACAAGAACCTTTGGCCGAGGTAACTGAGGGATaGAGCAAGCCACACCTGCTC +
Preference number: 5 (lower is better)
Translates to: CTKRRRTEQDNSEQEPLAEVTEG*SKPHLL
Trigger: GAGCAGGTGTGGCTTGCTCAATCCCTCAGTTACCTC...GGCCAAAGGTTCTTGTTCCGAGTTGTCTTGTTCAGTTCTCCTTCTCTTTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp AGAAGAGATCTCCTGAAGGTGCAAGTTGCAGTTGGCAGGGATTCGGAGAGACACGCTAAGACAACTCCCTaGAGGCATCACTTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: RRDLLKVQVAVGRDSERHAKTTP*RHHFLL
Trigger: AAGCAAGAAGTGATGCCTCAAGGGAGTTGTCTTAGC...GTGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACCTTCAGGAGATCTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CCA 90 bp GTGGTACATCCATTTCAACCTGTCCTTTTAGCAGCGGGGTTTGTCTaGGAGTCTCACGAATCATCACACTCCATCTGTCTAGGATCCTCA +
Preference number: 5 (lower is better)
Translates to: VVHPFQPVLLAAGFV*ESHESSHSICLGSS
Trigger: TGAGGATCCTAGACAGATGGAGTGTGATGATTCGTGAGACTCCCAGACAAACCCCGCTGCTAAAAGGACAGGTTGAAATGGATGTACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp GAGCTCAAGGCCTGGTTGCTCCATATAGTCTTTTTATTGGGGAAGGGCACAGTTCAATGCCTTGCAGGTTaGGCAAGGAGATGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: ELKAWLLHIVFLLGKGTVQCLAG*ARRWFL
Trigger: GAGAAACCATCTCCTTGCCAAACCTGCAAGGCATTG...AACTGTGCCCTTCCCCAATAAAAAGACTATATGGAGCAACCAGGCCTTGAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp GTGCAGGTGTCAATGCATGCAGCCATAGAGGAGCCAAGTCAGGCTGCAATAGTGGAGGTGTATGTGTTATaGTTATGTAGAGTAAGGGGG +
Preference number: 5 (lower is better)
Translates to: VQVSMHAAIEEPSQAAIVEVYVL*LCRVRG
Trigger: CCCCCTTACTCTACATAACAATAACACATACACCTC...CACTATTGCAGCCTGACTTGGCTCCTCTATGGCTGCATGCATTGACACCTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp AGAAGAGATCTCCTGAAGGTGCAAGTTGCAGTTGGCAGGGATTCGGAGAGACACTGCTTGGAATCTGAATaGTGCACCTCAATGAACCAG +
Preference number: 5 (lower is better)
Translates to: RRDLLKVQVAVGRDSERHCLESE*CTSMNQ
Trigger: CTGGTTCATTGAGGTGCACAATTCAGATTCCAAGCA...GTGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACCTTCAGGAGATCTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp AGAAGAGATCTCCTGAAGGTGCAAGTTGCAGTTGGCAGGGATTCGGAGAGACACGAGCTAGGACTTAGTTaGGCACAGCAATCAGACATT +
Preference number: 5 (lower is better)
Translates to: RRDLLKVQVAVGRDSERHELGLS*AQQSDI
Trigger: AATGTCTGATTGCTGTGCCAAACTAAGTCCTAGCTC...GTGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACCTTCAGGAGATCTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp TGCACAAAGAGAAGGAGAACTGAACAAGACAACTCGGAACAAGAACCTTTGGCCACCTGCTCCTGGGCCTaGTCATCTATCAACTGTGCT +
Preference number: 5 (lower is better)
Translates to: CTKRRRTEQDNSEQEPLATCSWA*SSINCA
Trigger: AGCACAGTTGATAGATGACAAGGCCCAGGAGCAGGT...GGCCAAAGGTTCTTGTTCCGAGTTGTCTTGTTCAGTTCTCCTTCTCTTTGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp GTGCAGGTGTCAATGCATGCAGCCATAGAGGAGCCAAGTCAGGCTGCAATAGTGGCATCACTTCTTGCTTaGTTTCCAAGTGAGCATATG +
Preference number: 5 (lower is better)
Translates to: VQVSMHAAIEEPSQAAIVASLLA*FPSEHM
Trigger: CATATGCTCACTTGGAAACAAAGCAAGAAGTGATGC...CACTATTGCAGCCTGACTTGGCTCCTCTATGGCTGCATGCATTGACACCTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS GCA 90 bp AGGATGTTAGCGCTGGCATTCACAGAACCCATGAGGACAGACACATaGTGGTGGATCTTGCTCAGGTCATTAAGTTTGCTGATGAGGTTT +
Preference number: 5 (lower is better)
Translates to: RMLALAFTEPMRTDT*WWILLRSLSLLMRF
Trigger: AAACCTCATCAGCAAACTTAATGACCTGAGCAAGATCCACCAGCATGTGTCTGTCCTCATGGGTTCTGTGAATGCCAGCGCTAACATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CCA 90 bp TGCTCTCTCGACAAACATTGCAGTGCTGGGTCCGGTGGCTGTAACTaGAGTACCAACAATGCATTCCAACAAGAAAAGGGTTGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: CSLDKHCSAGSGGCN*STNNAFQQEKGCFL
Trigger: CAGAAAACAACCCTTTTCTTGTTGGAATGCATTGTTGGTACTCCAGTTACAGCCACCGGACCCAGCACTGCAATGTTTGTCGAGAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CCA 90 bp TTAGCGCTGGCATTCACAGAACCCATGAGGACAGACACATGCTGGTaGATCTTGCTCAGGTCATTAAGTTTGCTGATGAGGTTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: LALAFTEPMRTDTCW*ILLRSLSLLMRFSA
Trigger: TGCAGAAAACCTCATCAGCAAACTTAATGACCTGAGCAAGATCCACCAGCATGTGTCTGTCCTCATGGGTTCTGTGAATGCCAGCGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp GATGGATATTTGGTGTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTGCACTCTCTCGACAAACATaGCAGTGCTGGGTCCGGTGG +
Preference number: 5 (lower is better)
Translates to: DGYLVFGPTTQAIVLITALSRQT*QCWVRW
Trigger: CCACCGGACCCAGCACTGCAATGTTTGTCGAGAGAG...TGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAACACCAAATATCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp GAGCTCAAGGCCTGGTTGCTCCATATAGTCTTTTTATTGGGGAAGGGCACAGTTTTCCACTTGCAGTCTTaGCTTGCTCTCAAAGCACAC +
Preference number: 5 (lower is better)
Translates to: ELKAWLLHIVFLLGKGTVFHLQS*LALKAH
Trigger: GTGTGCTTTGAGAGCAAGCAAAGACTGCAAGTGGAA...AACTGTGCCCTTCCCCAATAAAAAGACTATATGGAGCAACCAGGCCTTGAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp AGCTATCTTCTCCCAGGACTTCCTTCTGTAGTCCTAAATTTGCTCATTTGGACAAATTGGCCATCGCCTTaGGGGTCGCTTAGAGCAGTG +
Preference number: 5 (lower is better)
Translates to: SYLLPGLPSVVLNLLIWTNWPSP*GSLRAV
Trigger: CACTGCTCTAAGCGACCCCAAAGGCGATGGCCAATT...TGTCCAAATGAGCAAATTTAGGACTACAGAAGGAAGTCCTGGGAGAAGATAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGACACGAGCCAGATCATaGCCGGTTCCAAGTGGGATG +
Preference number: 5 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELTRARS*PVPSGM
Trigger: CATCCCACTTGGAACCGGCAATGATCTGGCTCGTGT...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp GATGGATATTTGGTGTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTGCAGCCTGCTCCACTCTGTaGAGGATGTCCAGAGGTGAC +
Preference number: 5 (lower is better)
Translates to: DGYLVFGPTTQAIVLITAACSTL*RMSRGD
Trigger: GTCACCTCTGGACATCCTCAACAGAGTGGAGCAGGC...TGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAACACCAAATATCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp ACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACGGCTTCCTATCTGCCTaGCTGCTGTCTGCATATTCT +
Preference number: 5 (lower is better)
Translates to: TILLARNCLPNQFVRKCYGFLSA*LLSAYS
Trigger: AGAATATGCAGACAGCAGCAAGGCAGATAGGAAGCC...GTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp ACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCGCTGCAAAAGTTCTTaGGTTCCCAGAAGGCCATAC +
Preference number: 5 (lower is better)
Translates to: TILLARNCLPNQFVRKCYRCKSS*VPRRPY
Trigger: GTATGGCCTTCTGGGAACCAAAGAACTTTTGCAGCG...GTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp AGCTATCTTCTCCCAGGACTTCCTTCTGTAGTCCTAAATTTGCTCATTTGGACAGAAGTCCAGCTGGGGTaGAGGGGCAGCTTGAATTTC +
Preference number: 5 (lower is better)
Translates to: SYLLPGLPSVVLNLLIWTEVQLG*RGSLNF
Trigger: GAAATTCAAGCTGCCCCTCAACCCCAGCTGGACTTC...TGTCCAAATGAGCAAATTTAGGACTACAGAAGGAAGTCCTGGGAGAAGATAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp GAGCTCAAGGCCTGGTTGCTCCATATAGTCTTTTTATTGGGGAAGGGCACAGTTTGGCCTGATTTAGGCTaGCGTTCCTCTTCTACCTTT +
Preference number: 5 (lower is better)
Translates to: ELKAWLLHIVFLLGKGTVWPDLG*RSSSTF
Trigger: AAAGGTAGAAGAGGAACGCAAGCCTAAATCAGGCCA...AACTGTGCCCTTCCCCAATAAAAAGACTATATGGAGCAACCAGGCCTTGAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp AGAAGAGATCTCCTGAAGGTGCAAGTTGCAGTTGGCAGGGATTCGGAGAGACACTTACCTCCTATAGTATaGACACCAGAAGCAGTTGGT +
Preference number: 5 (lower is better)
Translates to: RRDLLKVQVAVGRDSERHLPPIV*TPEAVG
Trigger: ACCAACTGCTTCTGGTGTCAATACTATAGGAGGTAA...GTGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACCTTCAGGAGATCTCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS TCA 90 bp TTTGATAACTGCCACAGCTCTCATGACACACTGCACACTGAGAGCTaGCAGGCATGTTTCCTTCTACCCATTGATGGGGCATGTTTACTT +
Preference number: 5 (lower is better)
Translates to: FDNCHSSHDTLHTES*QACFLLPIDGACLL
Trigger: AAGTAAACATGCCCCATCAATGGGTAGAAGGAAACATGCCTGTCAGCTCTCAGTGTGCAGTGTGTCATGAGAGCTGTGGCAGTTATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS GCA 90 bp GAAGTCTTGAAGTCTTTGATAACTGCCACAGCTCTCATGACACACTaGACACTGAGAGCTGACAGGCATGTTTCCTTCTACCCATTGATG +
Preference number: 5 (lower is better)
Translates to: EVLKSLITATALMTH*TLRADRHVSFYPLM
Trigger: CATCAATGGGTAGAAGGAAACATGCCTGTCAGCTCTCAGTGTGCAGTGTGTCATGAGAGCTGTGGCAGTTATCAAAGACTTCAAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CCA 90 bp CACAAAAACTGTGGCAAAGGTTTCTACAGCTGCTTTCTGCCACAGTaGCTTGAGACAGATCAATCGTTTCAAAGTGTGCAAACGCGGGAT +
Preference number: 5 (lower is better)
Translates to: HKNCGKGFYSCFLPQ*LETDQSFQSVQTRD
Trigger: ATCCCGCGTTTGCACACTTTGAAACGATTGATCTGTCTCAAGCCACTGTGGCAGAAAGCAGCTGTAGAAACCTTTGCCACAGTTTTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CCA 90 bp ATGTTAGCGCTGGCATTCACAGAACCCATGAGGACAGACACATGCTaGTGGATCTTGCTCAGGTCATTAAGTTTGCTGATGAGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: MLALAFTEPMRTDTC*WILLRSLSLLMRFS
Trigger: AGAAAACCTCATCAGCAAACTTAATGACCTGAGCAAGATCCACCAGCATGTGTCTGTCCTCATGGGTTCTGTGAATGCCAGCGCTAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGTCCATGTCTTTCCGGTaGGGTGCAGCCAGAGTGATT +
Preference number: 5 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELSMSFR*GAARVI
Trigger: AATCACTCTGGCTGCACCCAACCGGAAAGACATGGA...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp GAGCTCAAGGCCTGGTTGCTCCATATAGTCTTTTTATTGGGGAAGGGCACAGTTATGTCCAGAGGTGACTaGCTTTTGTTCCAGAATGCA +
Preference number: 5 (lower is better)
Translates to: ELKAWLLHIVFLLGKGTVMSRGD*LLFQNA
Trigger: TGCATTCTGGAACAAAAGCAAGTCACCTCTGGACAT...AACTGTGCCCTTCCCCAATAAAAAGACTATATGGAGCAACCAGGCCTTGAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp ACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACTTCTTAAGGCGGCTATaGTATTGCCCTGGGTGTTCA +
Preference number: 5 (lower is better)
Translates to: TILLARNCLPNQFVRKCYFLRRL*YCPGCS
Trigger: TGAACACCCAGGGCAATACAATAGCCGCCTTAAGAA...GTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp TTTTATTGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGGACAGATAGAGCAAGAGCACTACAATGCCTaGCAGGTTTGGCAAGGAGAT +
Preference number: 5 (lower is better)
Translates to: FYWGRAQLLMKSLGQIEQEHYNA*QVWQGD
Trigger: ATCTCCTTGCCAAACCTGCAAGGCATTGTAGTGCTC...TTGCTCTATCTGTCCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp ACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACGGGTTGAGGGGCAGCTaGAATTTCAGTATGCTTGTA +
Preference number: 5 (lower is better)
Translates to: TILLARNCLPNQFVRKCYGLRGS*NFSMLV
Trigger: TACAAGCATACTGAAATTCAAGCTGCCCCTCAACCC...GTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACACATGCTGGTGGATCTaGCTCAGGTCATTAAGTTTG +
Preference number: 5 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYTCWWI*LRSLSL
Trigger: CAAACTTAATGACCTGAGCAAGATCCACCAGCATGT...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACCTGCGGTGCCATAAATaGCCAATAAAACTCTGGACA +
Preference number: 5 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYLRCHK*PIKLWT
Trigger: TGTCCAGAGTTTTATTGGCAATTTATGGCACCGCAG...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp CTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCAAAGATACGAGCTCAAGGCCTGGTaGCTCCATATAGTCTTTTTA +
Preference number: 5 (lower is better)
Translates to: LARNCLPNQFVRKCYQRYELKAW*LHIVFL
Trigger: TAAAAAGACTATATGGAGCAACCAGGCCTTGAGCTC...GTATCTTTGGTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp TTTTATTGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGGACAGATAGAGCAAGAGGCCAGTTTTCTCTaGATAAGTGGGAAGGGACAG +
Preference number: 5 (lower is better)
Translates to: FYWGRAQLLMKSLGQIEQEASFL*ISGKGQ
Trigger: CTGTCCCTTCCCACTTATCAAGAGAAAACTGGCCTC...TTGCTCTATCTGTCCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS TCA 90 bp ATAGACAGCCCTGCTTCAGGTCCACCCTTCAATAAGTCGAACACTTaGGATGGGTTAAGGTATTGCTTGAATTTTCGGAGGAAGACGATC +
Preference number: 5 (lower is better)
Translates to: IDSPASGPPFNKSNT*DGLRYCLNFRRKTI
Trigger: GATCGTCTTCCTCCGAAAATTCAAGCAATACCTTAACCCATCTCAAGTGTTCGACTTATTGAAGGGTGGACCTGAAGCAGGGCTGTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp ACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCCAACAAGAAAAGGGTaGTTTTCTGCTGCAGGTATC +
Preference number: 5 (lower is better)
Translates to: TILLARNCLPNQFVRKCYPTRKG*FSAAGI
Trigger: GATACCTGCAGCAGAAAACAACCCTTTTCTTGTTGG...GTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTACTTGCAGTCTTTGCTaGCTCTCAAAGCACACAATC +
Preference number: 5 (lower is better)
Translates to: RLFLLHYSSGQELPTQPITCSLC*LSKHTI
Trigger: GATTGTGTGCTTTGAGAGCAAGCAAAGACTGCAAGT...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp CGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTGGGTTAAGGTATTGCTaGAATTTTCGGAGGAAGACG +
Preference number: 5 (lower is better)
Translates to: RLFLLHYSSGQELPTQPIGLRYC*NFRRKT
Trigger: CGTCTTCCTCCGAAAATTCAAGCAATACCTTAACCC...AATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp AGAAGAGATCTCCTGAAGGTGCAAGTTGCAGTTGGCAGGGATTCGGAGAGACACCACTTAGAGGTCGAGTaGTATTTTCAGCTCTTAAAA +
Preference number: 5 (lower is better)
Translates to: RRDLLKVQVAVGRDSERHHLEVE*YFQLLK
Trigger: TTTTAAGAGCTGAAAATACAACTCGACCTCTAAGTG...GTGTCTCTCCGAATCCCTGCCAACTGCAACTTGCACCTTCAGGAGATCTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp ACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACCCCTTCTTTAGGGCATaGGTGTTTTTGTTCCCCTTT +
Preference number: 5 (lower is better)
Translates to: TILLARNCLPNQFVRKCYPFFRA*VFLFPF
Trigger: AAAGGGGAACAAAAACACCAATGCCCTAAAGAAGGG...GTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp TGCACAAAGAGAAGGAGAACTGAACAAGACAACTCGGAACAAGAACCTTTGGCCACAGCAATCAGACATTaGGGGACTATCCCCTTGTTA +
Preference number: 5 (lower is better)
Translates to: CTKRRRTEQDNSEQEPLATAIRH*GTIPLL
Trigger: TAACAAGGGGATAGTCCCCAAATGTCTGATTGCTGT...GGCCAAAGGTTCTTGTTCCGAGTTGTCTTGTTCAGTTCTCCTTCTCTTTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp GAGAGAGAGAGAGGTTACCATATCTACAAAAAGAGATTTCACATGGTCATCTTAGGCCCTGCTGCTTATTaGCAGGGGCCTCTGAGGAAA +
Preference number: 5 (lower is better)
Translates to: ERERGYHIYKKRFHMVILGPAAY*QGPLRK
Trigger: TTTCCTCAGAGGCCCCTGCAAATAAGCAGCAGGGCC...TAAGATGACCATGTGAAATCTCTTTTTGTAGATATGGTAACCTCTCTCTCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp AGCTATCTTCTCCCAGGACTTCCTTCTGTAGTCCTAAATTTGCTCATTTGGACATTCTGCCACAGTGGCTaGAGACAGATCAATCGTTTC +
Preference number: 5 (lower is better)
Translates to: SYLLPGLPSVVLNLLIWTFCHSG*RQINRF
Trigger: GAAACGATTGATCTGTCTCAAGCCACTGTGGCAGAA...TGTCCAAATGAGCAAATTTAGGACTACAGAAGGAAGTCCTGGGAGAAGATAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp TTTTATTGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGGACAGATAGAGCAAGTTTCCTTCTACCCATaGATGGGGCATGTTTACTTC +
Preference number: 5 (lower is better)
Translates to: FYWGRAQLLMKSLGQIEQVSFYP*MGHVYF
Trigger: GAAGTAAACATGCCCCATCAATGGGTAGAAGGAAAC...TTGCTCTATCTGTCCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp AGCTATCTTCTCCCAGGACTTCCTTCTGTAGTCCTAAATTTGCTCATTTGGACACTGAAGCAACATTCCTaGGAAAACCGTCTCCTACAG +
Preference number: 5 (lower is better)
Translates to: SYLLPGLPSVVLNLLIWTLKQHS*ENRLLQ
Trigger: CTGTAGGAGACGGTTTTCCAAGGAATGTTGCTTCAG...TGTCCAAATGAGCAAATTTAGGACTACAGAAGGAAGTCCTGGGAGAAGATAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp GATGGATATTTGGTGTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTGCAGTTTCCCATCATCGATaGCAGGAGCCTCATATTCCG +
Preference number: 5 (lower is better)
Translates to: DGYLVFGPTTQAIVLITAVSHHR*QEPHIP
Trigger: CGGAATATGAGGCTCCTGCAATCGATGATGGGAAAC...TGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAACACCAAATATCCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp GAGCTCAAGGCCTGGTTGCTCCATATAGTCTTTTTATTGGGGAAGGGCACAGTTATTCCCACATTTTCATaGAGTTCTCAAAGTCCCGAT +
Preference number: 5 (lower is better)
Translates to: ELKAWLLHIVFLLGKGTVIPTFS*SSQSPD
Trigger: ATCGGGACTTTGAGAACTCAATGAAAATGTGGGAAT...AACTGTGCCCTTCCCCAATAAAAAGACTATATGGAGCAACCAGGCCTTGAGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp GAGAGAGAGAGAGGTTACCATATCTACAAAAAGAGATTTCACATGGTCATCTTAGTCAGAGAGGCTCTCTaGAGAGTCCTGGAAGTCCAG +
Preference number: 5 (lower is better)
Translates to: ERERGYHIYKKRFHMVILVREAL*RVLEVQ
Trigger: CTGGACTTCCAGGACTCTCAAGAGAGCCTCTCTGAC...TAAGATGACCATGTGAAATCTCTTTTTGTAGATATGGTAACCTCTCTCTCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGTCTGGGCATTGGGGTTaGATTAGATTTGCCCTGACT +
Preference number: 5 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELSGHWG*IRFALT
Trigger: AGTCAGGGCAAATCTAATCAAACCCCAATGCCCAGA...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp AGCTATCTTCTCCCAGGACTTCCTTCTGTAGTCCTAAATTTGCTCATTTGGACAGTTGAGAACCAGTGCTaGGAATCTGAATTGTGCACC +
Preference number: 5 (lower is better)
Translates to: SYLLPGLPSVVLNLLIWTVENQC*ESELCT
Trigger: GGTGCACAATTCAGATTCCAAGCACTGGTTCTCAAC...TGTCCAAATGAGCAAATTTAGGACTACAGAAGGAAGTCCTGGGAGAAGATAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS TCA 90 bp CTGGAACAAAGATTGGATTCATCCAGTCAATCTCAGATAGCTTTTTaGACTCCTTATTCATGGCATCCAGGGCGCTTTGTAGTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: LEQRLDSSSQSQIAF*TPYSWHPGRFVVQS
Trigger: AGACTGCACTACAAAGCGCCCTGGATGCCATGAATAAGGAGTTCAAAAAGCTATCTGAGATTGACTGGATGAATCCAATCTTTGTTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp ACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACAGATGGGTTAAGGTATaGCTTGAATTTTCGGAGGAA +
Preference number: 5 (lower is better)
Translates to: TILLARNCLPNQFVRKCYRWVKV*LEFSEE
Trigger: TTCCTCCGAAAATTCAAGCAATACCTTAACCCATCT...GTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTTTGGCCTTCAGGATTTaGTTCAACTCGGTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: KSYSQARSHIGWNGANGFLAFRI*FNSVAA
Trigger: TGCAGCCACCGAGTTGAACAAAATCCTGAAGGCCAA...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp GAGCTCAAGGCCTGGTTGCTCCATATAGTCTTTTTATTGGGGAAGGGCACAGTTTTCCTCATCCAGAGCTaGTTCAACTTGAAATATGAT +
Preference number: 5 (lower is better)
Translates to: ELKAWLLHIVFLLGKGTVFLIQS*FNLKYD
Trigger: ATCATATTTCAAGTTGAACAAGCTCTGGATGAGGAA...AACTGTGCCCTTCCCCAATAAAAAGACTATATGGAGCAACCAGGCCTTGAGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp TTTTATTGGGGAAGGGCACAGTTGCTGATGAAGAGTCTAGGACAGATAGAGCAATCCAGGTCCTCACTTTaGAGAGAAGATATAGAAGAC +
Preference number: 5 (lower is better)
Translates to: FYWGRAQLLMKSLGQIEQSRSSL*REDIED
Trigger: GTCTTCTATATCTTCTCTCAAAAGTGAGGACCTGGA...TTGCTCTATCTGTCCTAGACTCTTCATCAGCAACTGTGCCCTTCCCCAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp TGCACAAAGAGAAGGAGAACTGAACAAGACAACTCGGAACAAGAACCTTTGGCCCTCATTGCCACTGTCTaGGCCGTAAAATATATCATT +
Preference number: 5 (lower is better)
Translates to: CTKRRRTEQDNSEQEPLALIATV*AVKYII
Trigger: AATGATATATTTTACGGCCAAGACAGTGGCAATGAG...GGCCAAAGGTTCTTGTTCCGAGTTGTCTTGTTCAGTTCTCCTTCTCTTTGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp AGCTATCTTCTCCCAGGACTTCCTTCTGTAGTCCTAAATTTGCTCATTTGGACAATTGGAGGGTCTTTCTaGGTGGTGCTCATGTTTGTT +
Preference number: 5 (lower is better)
Translates to: SYLLPGLPSVVLNLLIWTIGGSF*VVLMFV
Trigger: AACAAACATGAGCACCACCAAGAAAGACCCTCCAAT...TGTCCAAATGAGCAAATTTAGGACTACAGAAGGAAGTCCTGGGAGAAGATAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp GAGCTCAAGGCCTGGTTGCTCCATATAGTCTTTTTATTGGGGAAGGGCACAGTTGTTTTCATGAGAAATTaGCAAGAAGAACCACAGGAA +
Preference number: 5 (lower is better)
Translates to: ELKAWLLHIVFLLGKGTVVFMRN*QEEPQE
Trigger: TTCCTGTGGTTCTTCTTGCAAATTTCTCATGAAAAC...AACTGTGCCCTTCCCCAATAAAAAGACTATATGGAGCAACCAGGCCTTGAGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTGGTGGAGTTCCAGAGTaGAGAACCAGTGCTTGGAAT +
Preference number: 5 (lower is better)
Translates to: KSYSQARSHIGWNGANGFGGVPE*RTSAWN
Trigger: ATTCCAAGCACTGGTTCTCAACTCTGGAACTCCACC...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp TGCACAAAGAGAAGGAGAACTGAACAAGACAACTCGGAACAAGAACCTTTGGCCATGGGTTTGGTTGCTTaGGTATTATTTTCCACCTCT +
Preference number: 5 (lower is better)
Translates to: CTKRRRTEQDNSEQEPLAMGLVA*VLFSTS
Trigger: AGAGGTGGAAAATAATACCAAAGCAACCAAACCCAT...GGCCAAAGGTTCTTGTTCCGAGTTGTCTTGTTCAGTTCTCCTTCTCTTTGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS GCA 90 bp GAGGTCATCAGTGATAGACAATGTATTCCACTTGCAGTCTTTGCTTaGTCTCAAAGCACACAATCTGTGAGATTTCACTTTGCACACTTC +
Preference number: 5 (lower is better)
Translates to: EVISDRQCIPLAVFA*SQSTQSVRFHFAHF
Trigger: GAAGTGTGCAAAGTGAAATCTCACAGATTGTGTGCTTTGAGAGCAAGCAAAGACTGCAAGTGGAATACATTGTCTATCACTGATGACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTGGCTATGTGGTCTATTaGAGGAATGAAGGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: KSYSQARSHIGWNGANGFGYVVY*RNEGLP
Trigger: AGGAAGCCCTTCATTCCTCAAATAGACCACATAGCC...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp GAGAGAGAGAGAGGTTACCATATCTACAAAAAGAGATTTCACATGGTCATCTTAAAGGCGGCTATTGTATaGCCCTGGGTGTTCATCTCT +
Preference number: 5 (lower is better)
Translates to: ERERGYHIYKKRFHMVILKAAIV*PWVFIS
Trigger: AGAGATGAACACCCAGGGCAATACAATAGCCGCCTT...TAAGATGACCATGTGAAATCTCTTTTTGTAGATATGGTAACCTCTCTCTCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTAGGCCATACCACATCTaGTTCTTAAGGCGGCTATTG +
Preference number: 5 (lower is better)
Translates to: KSYSQARSHIGWNGANGFRPYHI*FLRRLL
Trigger: CAATAGCCGCCTTAAGAACAAGATGTGGTATGGCCT...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp GCAGTTCAAATGTATCGGCTTTTTCTTCTCCACTATTCTTCTGGCCAGGAATTGGCTGCAATAGTGAGCTaGCTGATTTCATCTAATACC +
Preference number: 5 (lower is better)
Translates to: AVQMYRLFLLHYSSGQELAAIVS*LISSNT
Trigger: GGTATTAGATGAAATCAGCAAGCTCACTATTGCAGC...CAATTCCTGGCCAGAAGAATAGTGGAGAAGAAAAAGCCGATACATTTGAACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp ACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACTCTGTAGTCCTAAATTaGCTCATTTGGACATTTTCC +
Preference number: 5 (lower is better)
Translates to: TILLARNCLPNQFVRKCYSVVLN*LIWTFS
Trigger: GGAAAATGTCCAAATGAGCAAATTTAGGACTACAGA...GTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp ACTATTCTTCTGGCCAGGAATTGCCTACCCAACCAATTCGTCAGAAAGTGCTACATGGTGCTAATGGGTTaGGTTGCTTTGGTATTATTT +
Preference number: 5 (lower is better)
Translates to: TILLARNCLPNQFVRKCYMVLMG*VALVLF
Trigger: AAATAATACCAAAGCAACCAAACCCATTAGCACCAT...GTAGCACTTTCTGACGAATTGGTTGGGTAGGCAATTCCTGGCCAGAAGAATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp AGCTATCTTCTCCCAGGACTTCCTTCTGTAGTCCTAAATTTGCTCATTTGGACACTAAGCTTCCATCTCTaGAAAGAGTTACAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: SYLLPGLPSVVLNLLIWTLSFHL*KELQFF
Trigger: GAAGAACTGTAACTCTTTCAAGAGATGGAAGCTTAG...TGTCCAAATGAGCAAATTTAGGACTACAGAAGGAAGTCCTGGGAGAAGATAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTGACAATGTATTCCACTaGCAGTCTTTGCTTGCTCTC +
Preference number: 5 (lower is better)
Translates to: KSYSQARSHIGWNGANGFDNVFH*QSLLAL
Trigger: GAGAGCAAGCAAAGACTGCAAGTGGAATACATTGTC...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp GAGAGAGAGAGAGGTTACCATATCTACAAAAAGAGATTTCACATGGTCATCTTAATCTCTGTGGGGTACTaGGCCTTCAGGATTTTGTTC +
Preference number: 5 (lower is better)
Translates to: ERERGYHIYKKRFHMVILISVGY*AFRILF
Trigger: GAACAAAATCCTGAAGGCCAAGTACCCCACAGAGAT...TAAGATGACCATGTGAAATCTCTTTTTGTAGATATGGTAACCTCTCTCTCTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp GATGGATATTTGGTGTTTGGTCCCACCACCCAAGCAATTGTATTAATTACTGCACAAGAAATAGGGCAGTaGGTAGAGGTGTATGTGTTA +
Preference number: 5 (lower is better)
Translates to: DGYLVFGPTTQAIVLITAQEIGQ*VEVYVL
Trigger: TAACACATACACCTCTACCAACTGCCCTATTTCTTG...TGCAGTAATTAATACAATTGCTTGGGTGGTGGGACCAAACACCAAATATCCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp GAGAGAGAGAGAGGTTACCATATCTACAAAAAGAGATTTCACATGGTCATCTTAATGGATATTTGGTGTTaGGTCCCACCACCCAAGCAA +
Preference number: 5 (lower is better)
Translates to: ERERGYHIYKKRFHMVILMDIWC*VPPPKQ
Trigger: TTGCTTGGGTGGTGGGACCAAACACCAAATATCCAT...TAAGATGACCATGTGAAATCTCTTTTTGTAGATATGGTAACCTCTCTCTCTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTCTCAGGTCATTAAGTTaGCTGATGAGGTTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: KSYSQARSHIGWNGANGFLRSLS*LMRFSA
Trigger: TGCAGAAAACCTCATCAGCAAACTTAATGACCTGAG...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTCCTCTGGAACAAAGATaGGATTCATCCAGTCAATCT +
Preference number: 5 (lower is better)
Translates to: KSYSQARSHIGWNGANGFPLEQR*DSSSQS
Trigger: AGATTGACTGGATGAATCCAATCTTTGTTCCAGAGG...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS TCA 90 bp GCTTGTCTGGTTAATATCTTCTGGGTCATCTTCCAGGAAGAAAGTTaGACTAAAGTTCTTAACAGATATTGTCTGTCTGCTTTCCTCATC +
Preference number: 5 (lower is better)
Translates to: ACLVNIFWVIFQEES*TKVLNRYCLSAFLI
Trigger: GATGAGGAAAGCAGACAGACAATATCTGTTAAGAACTTTAGTTCAACTTTCTTCCTGGAAGATGACCCAGAAGATATTAACCAGACAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS-3UTR CAA 90 bp AAATCATATAGCCAAGCAAGGTCTCATATAGGATGGAATGGTGCTAATGGGTTTGTAGAGCTTCTGTCCTaGAACCAGAAAATATCTAAG +
Preference number: 5 (lower is better)
Translates to: KSYSQARSHIGWNGANGFVELLS*NQKISK
Trigger: CTTAGATATTTTCTGGTTCAAGGACAGAAGCTCTAC...AAACCCATTAGCACCATTCCATCCTATATGAGACCTTGCTTGGCTATATGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CCA 72 bp GGGCCGGCTCTGTGGCAGGTTCTGGGGCCGGCTCTGTaGCAGGTTCTGGGGCCGGTTCTGAGGCCGGCTCTG +
Preference number: 6 (lower is better)
Translates to: GPALWQVLGPAL*QVLGPVLRPAL
Trigger: CAGAGCCGGCCTCAGAACCGGCCCCAGAACCTGCCACAGAGCCGGCCCCAGAACCTGCCACAGAGCCGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CCA 72 bp TGGAGTCGGCTCTGGGGCAGACTCTGTGGCAGGTTCTaGGGCCGGTTCTGGGGCCGGCTCTGTGGCAGGTTC +
Preference number: 6 (lower is better)
Translates to: WSRLWGRLCGRF*GRFWGRLCGRF
Trigger: GAACCTGCCACAGAGCCGGCCCCAGAACCGGCCCCAGAACCTGCCACAGAGTCTGCCCCAGAGCCGACTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS TCA 72 bp GTCCATGGCCGCACACCGCTTCAGGTCTGGGCAGCCTaGGTCCCTAAGCCTGGAAGGCTAAAGTACCCTCGG +
Preference number: 6 (lower is better)
Translates to: VHGRTPLQVWAA*VPKPGRLKYPR
Trigger: CCGAGGGTACTTTAGCCTTCCAGGCTTAGGGACTCAGGCTGCCCAGACCTGAAGCGGTGTGCGGCCATGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CCA 72 bp TGGCAGGTTCTGGGGCCGGTTCTGAGGCCGGCTCTGTaGCTGGTTCTGGGGTCGGTTCTGTGTACAGTTCTG +
Preference number: 6 (lower is better)
Translates to: WQVLGPVLRPAL*LVLGSVLCTVL
Trigger: CAGAACTGTACACAGAACCGACCCCAGAACCAGCCACAGAGCCGGCCTCAGAACCGGCCCCAGAACCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 72 bp CTGCATCTGGGCATACTCCTCGTCAGAGAGGCTCTCTaGAGAGTCCTGGAAGTCCAGCTGGGGTTGAGGGGC +
Preference number: 6 (lower is better)
Translates to: LHLGILLVREAL*RVLEVQLGLRG
Trigger: GCCCCTCAACCCCAGCTGGACTTCCAGGACTCTCAAGAGAGCCTCTCTGACGAGGAGTATGCCCAGATGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CCA 72 bp TGGCTGGTTCTGGGGTCGGTTCTGTGTACAGTTCTGTaGCTGATTCTGAGGTCGCCTCTGGACAGGGACCTG +
Preference number: 6 (lower is better)
Translates to: WLVLGSVLCTVL*LILRSPLDRDL
Trigger: CAGGTCCCTGTCCAGAGGCGACCTCAGAATCAGCCACAGAACTGTACACAGAACCGACCCCAGAACCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 90 bp CTCACACTAGCCTGCTCCACTCTGTTGAGGATGTCCAGAGGTGACTaGCTTTTGTTCCAGAATGCACCCCAGCCCAGAACACGAGCCAGA +
Preference number: 6 (lower is better)
Translates to: LTLACSTLLRMSRGD*LLFQNAPQPRTRAR
Trigger: TCTGGCTCGTGTTCTGGGCTGGGGTGCATTCTGGAACAAAAGCAAGTCACCTCTGGACATCCTCAACAGAGTGGAGCAGGCTAGTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS TCA 72 bp ACTAGCCTGCTCCACTCTGTTGAGGATGTCCAGAGGTaGCTTGCTTTTGTTCCAGAATGCACCCCAGCCCAG +
Preference number: 6 (lower is better)
Translates to: TSLLHSVEDVQR*LAFVPECTPAQ
Trigger: CTGGGCTGGGGTGCATTCTGGAACAAAAGCAAGTCACCTCTGGACATCCTCAACAGAGTGGAGCAGGCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 72 bp GCCTGCTCCACTCTGTTGAGGATGTCCAGAGGTGACTaGCTTTTGTTCCAGAATGCACCCCAGCCCAGAACA +
Preference number: 6 (lower is better)
Translates to: ACSTLLRMSRGD*LLFQNAPQPRT
Trigger: TGTTCTGGGCTGGGGTGCATTCTGGAACAAAAGCAAGTCACCTCTGGACATCCTCAACAGAGTGGAGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS TCA 72 bp TGCCACAGCTCTCATGACACACTGCACACTGAGAGCTaGCAGGCATGTTTCCTTCTACCCATTGATGGGGCA +
Preference number: 6 (lower is better)
Translates to: CHSSHDTLHTES*QACFLLPIDGA
Trigger: TGCCCCATCAATGGGTAGAAGGAAACATGCCTGTCAGCTCTCAGTGTGCAGTGTGTCATGAGAGCTGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS GCA 72 bp TTGCTGATGAGGTTTTCTGCAAGCCGAGCTAAGTGCTaGATCTGGGCATACTCCTCGTCAGAGAGGCTCTCT +
Preference number: 6 (lower is better)
Translates to: LLMRFSASRAKC*IWAYSSSERLS
Trigger: AGAGAGCCTCTCTGACGAGGAGTATGCCCAGATGCAGCACTTAGCTCGGCTTGCAGAAAACCTCATCAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS GCA 72 bp AGTTTGCTGATGAGGTTTTCTGCAAGCCGAGCTAAGTaGTGCATCTGGGCATACTCCTCGTCAGAGAGGCTC +
Preference number: 6 (lower is better)
Translates to: SLLMRFSASRAK*CIWAYSSSERL
Trigger: GAGCCTCTCTGACGAGGAGTATGCCCAGATGCAGCACTTAGCTCGGCTTGCAGAAAACCTCATCAGCAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 90 bp ACACTCCATCTGTCTAGGATCCTCACACTAGCCTGCTCCACTCTGTaGAGGATGTCCAGAGGTGACTTGCTTTTGTTCCAGAATGCACCC +
Preference number: 6 (lower is better)
Translates to: TLHLSRILTLACSTL*RMSRGDLLLFQNAP
Trigger: GGGTGCATTCTGGAACAAAAGCAAGTCACCTCTGGACATCCTCAACAGAGTGGAGCAGGCTAGTGTGAGGATCCTAGACAGATGGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS GCA 72 bp GTCTTTAGACCTCTCTCTCGAGTGTCCACCGGACATTaGAATAGACATGGTGCTGGACTTGGACGGAACTCT +
Preference number: 6 (lower is better)
Translates to: VFRPLSRVSTGH*NRHGAGLGRNS
Trigger: AGAGTTCCGTCCAAGTCCAGCACCATGTCTATTGCAATGTCCGGTGGACACTCGAGAGAGAGGTCTAAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS GCA 72 bp ATCACACTCCATCTGTCTAGGATCCTCACACTAGCCTaGTCCACTCTGTTGAGGATGTCCAGAGGTGACTTG +
Preference number: 6 (lower is better)
Translates to: ITLHLSRILTLA*STLLRMSRGDL
Trigger: CAAGTCACCTCTGGACATCCTCAACAGAGTGGAGCAGGCTAGTGTGAGGATCCTAGACAGATGGAGTGTGAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS GCA 72 bp GCGCTGGCATTCACAGAACCCATGAGGACAGACACATaGTGGTGGATCTTGCTCAGGTCATTAAGTTTGCTG +
Preference number: 6 (lower is better)
Translates to: ALAFTEPMRTDT*WWILLRSLSLL
Trigger: CAGCAAACTTAATGACCTGAGCAAGATCCACCAGCATGTGTCTGTCCTCATGGGTTCTGTGAATGCCAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 72 bp CCACCACAAACCAGAATGCGAAAGCGAGCAAAGTTCTaGAACATAGACAGCCCTGCTTCAGGTCCACCCTTC +
Preference number: 6 (lower is better)
Translates to: PPQTRMRKRAKF*NIDSPASGPPF
Trigger: GAAGGGTGGACCTGAAGCAGGGCTGTCTATGTTCAAGAACTTTGCTCGCTTTCGCATTCTGGTTTGTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 72 bp CTGTCTAGGATCCTCACACTAGCCTGCTCCACTCTGTaGAGGATGTCCAGAGGTGACTTGCTTTTGTTCCAG +
Preference number: 6 (lower is better)
Translates to: LSRILTLACSTL*RMSRGDLLLFQ
Trigger: CTGGAACAAAAGCAAGTCACCTCTGGACATCCTCAACAGAGTGGAGCAGGCTAGTGTGAGGATCCTAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 72 bp GAGGCTCTCTTGAGAGTCCTGGAAGTCCAGCTGGGGTaGAGGGGCAGCTTGAATTTCAGTATGCTTGTATTC +
Preference number: 6 (lower is better)
Translates to: EALLRVLEVQLG*RGSLNFSMLVF
Trigger: GAATACAAGCATACTGAAATTCAAGCTGCCCCTCAACCCCAGCTGGACTTCCAGGACTCTCAAGAGAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 90 bp CTGGTTGCGATGATCATCTCTGTGGGGTACTTGGCCTTCAGGATTTaGTTCAACTCGGTGGCTGCAGATTCTAAGTGTTGGATGGCAGCA +
Preference number: 6 (lower is better)
Translates to: LVAMIISVGYLAFRI*FNSVAADSKCWMAA
Trigger: TGCTGCCATCCAACACTTAGAATCTGCAGCCACCGAGTTGAACAAAATCCTGAAGGCCAAGTACCCCACAGAGATGATCATCGCAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 90 bp GGCCTTTGTAGCCAGCTCCAACTTGCACTTGGCTATGTGGTCTATTaGAGGAATGAAGGGCTTCCTATCTGCCTTGCTGCTGTCTGCATA +
Preference number: 6 (lower is better)
Translates to: GLCSQLQLALGYVVY*RNEGLPICLAAVCI
Trigger: TATGCAGACAGCAGCAAGGCAGATAGGAAGCCCTTCATTCCTCAAATAGACCACATAGCCAAGTGCAAGTTGGAGCTGGCTACAAAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 90 bp CTCGTCAGAGAGGCTCTCTTGAGAGTCCTGGAAGTCCAGCTGGGGTaGAGGGGCAGCTTGAATTTCAGTATGCTTGTATTCCCACATTTT +
Preference number: 6 (lower is better)
Translates to: LVREALLRVLEVQLG*RGSLNFSMLVFPHF
Trigger: AAAATGTGGGAATACAAGCATACTGAAATTCAAGCTGCCCCTCAACCCCAGCTGGACTTCCAGGACTCTCAAGAGAGCCTCTCTGACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CCA 72 bp TCGCTTAGAGCAGTGGGAGGAATGACTGATGAGCGATaGCTTCTGAAGCAACATTCCTTGGAAAACCGTCTC +
Preference number: 6 (lower is better)
Translates to: SLRAVGGMTDER*LLKQHSLENRL
Trigger: GAGACGGTTTTCCAAGGAATGTTGCTTCAGAAGCCATCGCTCATCAGTCATTCCTCCCACTGCTCTAAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CCA 72 bp CATCCACCTGCACTGGGATACCTTCTTCACCATCAATaGTTATCATCACCTCATGGCACTGGGCAATGCGAT +
Preference number: 6 (lower is better)
Translates to: HPPALGYLLHHQ*LSSPHGTGQCD
Trigger: ATCGCATTGCCCAGTGCCATGAGGTGATGATAACCATTGATGGTGAAGAAGGTATCCCAGTGCAGGTGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 90 bp ATGCACCGTAGAATTACACCACAGGCAGCGGAAGTCTTGAAGTCTTaGATAACTGCCACAGCTCTCATGACACACTGCACACTGAGAGCT +
Preference number: 6 (lower is better)
Translates to: MHRRITPQAAEVLKS*ITATALMTHCTLRA
Trigger: AGCTCTCAGTGTGCAGTGTGTCATGAGAGCTGTGGCAGTTATCAAAGACTTCAAGACTTCCGCTGCCTGTGGTGTAATTCTACGGTGCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CCA 72 bp CCATTTCAACCTGTCCTTTTAGCAGCGGGGTTTGTCTaGGAGTCTCACGAATCATCACACTCCATCTGTCTA +
Preference number: 6 (lower is better)
Translates to: PFQPVLLAAGFV*ESHESSHSICL
Trigger: TAGACAGATGGAGTGTGATGATTCGTGAGACTCCCAGACAAACCCCGCTGCTAAAAGGACAGGTTGAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CCA 72 bp GCATTCACAGAACCCATGAGGACAGACACATGCTGGTaGATCTTGCTCAGGTCATTAAGTTTGCTGATGAGG +
Preference number: 6 (lower is better)
Translates to: AFTEPMRTDTCW*ILLRSLSLLMR
Trigger: CCTCATCAGCAAACTTAATGACCTGAGCAAGATCCACCAGCATGTGTCTGTCCTCATGGGTTCTGTGAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CCA 72 bp CTGGCATTCACAGAACCCATGAGGACAGACACATGCTaGTGGATCTTGCTCAGGTCATTAAGTTTGCTGATG +
Preference number: 6 (lower is better)
Translates to: LAFTEPMRTDTC*WILLRSLSLLM
Trigger: CATCAGCAAACTTAATGACCTGAGCAAGATCCACCAGCATGTGTCTGTCCTCATGGGTTCTGTGAATGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 72 bp ACACTGAGAGCTGACAGGCATGTTTCCTTCTACCCATaGATGGGGCATGTTTACTTCATCTGCAGGCAGAAG +
Preference number: 6 (lower is better)
Translates to: TLRADRHVSFYP*MGHVYFICRQK
Trigger: CTTCTGCCTGCAGATGAAGTAAACATGCCCCATCAATGGGTAGAAGGAAACATGCCTGTCAGCTCTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 72 bp AAGAATCTGGTTGCGATGATCATCTCTGTGGGGTACTaGGCCTTCAGGATTTTGTTCAACTCGGTGGCTGCA +
Preference number: 6 (lower is better)
Translates to: KNLVAMIISVGY*AFRILFNSVAA
Trigger: TGCAGCCACCGAGTTGAACAAAATCCTGAAGGCCAAGTACCCCACAGAGATGATCATCGCAACCAGATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 90 bp ACAGTCATCATGCACCGTAGAATTACACCACAGGCAGCGGAAGTCTaGAAGTCTTTGATAACTGCCACAGCTCTCATGACACACTGCACA +
Preference number: 6 (lower is better)
Translates to: TVIMHRRITPQAAEV*KSLITATALMTHCT
Trigger: TGTGCAGTGTGTCATGAGAGCTGTGGCAGTTATCAAAGACTTCAAGACTTCCGCTGCCTGTGGTGTAATTCTACGGTGCATGATGACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 90 bp GTGGGAGGAATGACTGATGAGCGATGGCTTCTGAAGCAACATTCCTaGGAAAACCGTCTCCTACAGTCATCATGCACCGTAGAATTACAC +
Preference number: 6 (lower is better)
Translates to: VGGMTDERWLLKQHS*ENRLLQSSCTVELH
Trigger: GTGTAATTCTACGGTGCATGATGACTGTAGGAGACGGTTTTCCAAGGAATGTTGCTTCAGAAGCCATCGCTCATCAGTCATTCCTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 90 bp GCTGAACACAAGAATCTGGTTGCGATGATCATCTCTGTGGGGTACTaGGCCTTCAGGATTTTGTTCAACTCGGTGGCTGCAGATTCTAAG +
Preference number: 6 (lower is better)
Translates to: AEHKNLVAMIISVGY*AFRILFNSVAADSK
Trigger: CTTAGAATCTGCAGCCACCGAGTTGAACAAAATCCTGAAGGCCAAGTACCCCACAGAGATGATCATCGCAACCAGATTCTTGTGTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS GCA 72 bp AAGTCTTTGATAACTGCCACAGCTCTCATGACACACTaGACACTGAGAGCTGACAGGCATGTTTCCTTCTAC +
Preference number: 6 (lower is better)
Translates to: KSLITATALMTH*TLRADRHVSFY
Trigger: GTAGAAGGAAACATGCCTGTCAGCTCTCAGTGTGCAGTGTGTCATGAGAGCTGTGGCAGTTATCAAAGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CCA 72 bp GCTGGTAATGTTGAGCACTACAATGCCTTGCAGGTTTaGCAAGGAGATGGTTTCTCCATCACACTCCAAATG +
Preference number: 6 (lower is better)
Translates to: AGNVEHYNALQV*QGDGFSITLQM
Trigger: CATTTGGAGTGTGATGGAGAAACCATCTCCTTGCCAAACCTGCAAGGCATTGTAGTGCTCAACATTACCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 72 bp ATGCACCGTAGAATTACACCACAGGCAGCGGAAGTCTaGAAGTCTTTGATAACTGCCACAGCTCTCATGACA +
Preference number: 6 (lower is better)
Translates to: MHRRITPQAAEV*KSLITATALMT
Trigger: TGTCATGAGAGCTGTGGCAGTTATCAAAGACTTCAAGACTTCCGCTGCCTGTGGTGTAATTCTACGGTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 72 bp ATGACTGATGAGCGATGGCTTCTGAAGCAACATTCCTaGGAAAACCGTCTCCTACAGTCATCATGCACCGTA +
Preference number: 6 (lower is better)
Translates to: MTDERWLLKQHS*ENRLLQSSCTV
Trigger: TACGGTGCATGATGACTGTAGGAGACGGTTTTCCAAGGAATGTTGCTTCAGAAGCCATCGCTCATCAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 72 bp ATGATCATCTCTGTGGGGTACTTGGCCTTCAGGATTTaGTTCAACTCGGTGGCTGCAGATTCTAAGTGTTGG +
Preference number: 6 (lower is better)
Translates to: MIISVGYLAFRI*FNSVAADSKCW
Trigger: CCAACACTTAGAATCTGCAGCCACCGAGTTGAACAAAATCCTGAAGGCCAAGTACCCCACAGAGATGATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 90 bp TTCAATGGGAATACAGGAAGCTGCACCCATCTCATTGCCACTGTCTaGGCCGTAAAATATATCATTCAGGATGTTAGCGCTGGCATTCAC +
Preference number: 6 (lower is better)
Translates to: FNGNTGSCTHLIATV*AVKYIIQDVSAGIH
Trigger: GTGAATGCCAGCGCTAACATCCTGAATGATATATTTTACGGCCAAGACAGTGGCAATGAGATGGGTGCAGCTTCCTGTATTCCCATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS TCA 72 bp CCTGCTTCAGGTCCACCCTTCAATAAGTCGAACACTTaGGATGGGTTAAGGTATTGCTTGAATTTTCGGAGG +
Preference number: 6 (lower is better)
Translates to: PASGPPFNKSNT*DGLRYCLNFRR
Trigger: CCTCCGAAAATTCAAGCAATACCTTAACCCATCTCAAGTGTTCGACTTATTGAAGGGTGGACCTGAAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS TCA 72 bp CTGCTGCCTCCTCAGCCAGGACATCGATCAGGACACTaGGCCTATCATACATTAAGTCACTTTTCAAAATCA +
Preference number: 6 (lower is better)
Translates to: LLPPQPGHRSGH*AYHTLSHFSKS
Trigger: TGATTTTGAAAAGTGACTTAATGTATGATAGGCTCAGTGTCCTGATCGATGTCCTGGCTGAGGAGGCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CCA 72 bp TGTGGCAAAGGTTTCTACAGCTGCTTTCTGCCACAGTaGCTTGAGACAGATCAATCGTTTCAAAGTGTGCAA +
Preference number: 6 (lower is better)
Translates to: CGKGFYSCFLPQ*LETDQSFQSVQ
Trigger: TTGCACACTTTGAAACGATTGATCTGTCTCAAGCCACTGTGGCAGAAAGCAGCTGTAGAAACCTTTGCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CCA 72 bp ATTTTGTTCAACTCGGTGGCTGCAGATTCTAAGTGTTaGATGGCAGCAGCCTCAAATCGTGGTACATCCATT +
Preference number: 6 (lower is better)
Translates to: ILFNSVAADSKC*MAAASNRGTSI
Trigger: AATGGATGTACCACGATTTGAGGCTGCTGCCATCCAACACTTAGAATCTGCAGCCACCGAGTTGAACAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CCA 72 bp CGGTGCCATAAATTGCCAATAAAACTCTGGACACTCTaGCCTGATTTAGGCTTGCGTTCCTCTTCTACCTTT +
Preference number: 6 (lower is better)
Translates to: RCHKLPIKLWTL*PDLGLRSSSTF
Trigger: AAAGGTAGAAGAGGAACGCAAGCCTAAATCAGGCCAGAGTGTCCAGAGTTTTATTGGCAATTTATGGCACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 72 bp GTCTTTCCGGTTGGGTGCAGCCAGAGTGATTTTTCGTaGTGGTGTAATAACACAAAAACTGTGGCAAAGGTT +
Preference number: 6 (lower is better)
Translates to: VFPVGCSQSDFS*WCNNTKTVAKV
Trigger: AACCTTTGCCACAGTTTTTGTGTTATTACACCACAACGAAAAATCACTCTGGCTGCACCCAACCGGAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 72 bp AATACAGGAAGCTGCACCCATCTCATTGCCACTGTCTaGGCCGTAAAATATATCATTCAGGATGTTAGCGCT +
Preference number: 6 (lower is better)
Translates to: NTGSCTHLIATV*AVKYIIQDVSA
Trigger: AGCGCTAACATCCTGAATGATATATTTTACGGCCAAGACAGTGGCAATGAGATGGGTGCAGCTTCCTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS GCA 72 bp GATGTTAATCCATTCTTCCATGTCTTTCCGGTTGGGTaGAGCCAGAGTGATTTTTCGTTGTGGTGTAATAAC +
Preference number: 6 (lower is better)
Translates to: DVNPFFHVFPVG*SQSDFSLWCNN
Trigger: GTTATTACACCACAACGAAAAATCACTCTGGCTGCACCCAACCGGAAAGACATGGAAGAATGGATTAACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS GCA 72 bp TATGTGGTCTATTTGAGGAATGAAGGGCTTCCTATCTaGCTTGCTGCTGTCTGCATATTCTGTAGCACTTTT +
Preference number: 6 (lower is better)
Translates to: YVVYLRNEGLPI*LAAVCIFCSTF
Trigger: AAAAGTGCTACAGAATATGCAGACAGCAGCAAGGCAGATAGGAAGCCCTTCATTCCTCAAATAGACCACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 72 bp AAACGCGGGATGGTGTGCAAAGTAGAGCTTCTGTCCTaGAACCAGAAAATATCTAAGCTTCCATCTCTTGAA +
Preference number: 6 (lower is better)
Translates to: KRGMVCKVELLS*NQKISKLPSLE
Trigger: TTCAAGAGATGGAAGCTTAGATATTTTCTGGTTCAAGGACAGAAGCTCTACTTTGCACACCATCCCGCGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 72 bp AGAAGGAGGTCATCAGTGATAGACAATGTATTCCACTaGCAGTCTTTGCTTGCTCTCAAAGCACACAATCTG +
Preference number: 6 (lower is better)
Translates to: RRRSSVIDNVFH*QSLLALKAHNL
Trigger: CAGATTGTGTGCTTTGAGAGCAAGCAAAGACTGCAAGTGGAATACATTGTCTATCACTGATGACCTCCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 90 bp AAAGTGTGCAAACGCGGGATGGTGTGCAAAGTAGAGCTTCTGTCCTaGAACCAGAAAATATCTAAGCTTCCATCTCTTGAAAGAGTTACA +
Preference number: 6 (lower is better)
Translates to: KVCKRGMVCKVELLS*NQKISKLPSLERVT
Trigger: TGTAACTCTTTCAAGAGATGGAAGCTTAGATATTTTCTGGTTCAAGGACAGAAGCTCTACTTTGCACACCATCCCGCGTTTGCACACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS TCA 72 bp TTGAATTTCAGTATGCTTGTATTCCCACATTTTCATTaGGTTCTCAAAGTCCCGATCTCTTGTCAGCATCTG +
Preference number: 6 (lower is better)
Translates to: LNFSMLVFPHFH*VLKVPISCQHL
Trigger: CAGATGCTGACAAGAGATCGGGACTTTGAGAACTCAATGAAAATGTGGGAATACAAGCATACTGAAATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS GCA 72 bp AGTGATAGACAATGTATTCCACTTGCAGTCTTTGCTTaGTCTCAAAGCACACAATCTGTGAGATTTCACTTT +
Preference number: 6 (lower is better)
Translates to: SDRQCIPLAVFA*SQSTQSVRFHF
Trigger: AAAGTGAAATCTCACAGATTGTGTGCTTTGAGAGCAAGCAAAGACTGCAAGTGGAATACATTGTCTATCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611977.2
CDS CAA 72 bp CTTGAATTTCAGTATGCTTGTATTCCCACATTTTCATaGAGTTCTCAAAGTCCCGATCTCTTGTCAGCATCT +
Preference number: 6 (lower is better)
Translates to: LEFQYACIPTFS*SSQSPDLLSAS
Trigger: AGATGCTGACAAGAGATCGGGACTTTGAGAACTCAATGAAAATGTGGGAATACAAGCATACTGAAATTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611977.2