RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DGKI (Homo sapiens)

Ensembl gene IDs: ENSG00000157680

Ensembl transcript IDs: ENST00000288490.9, ENST00000424189.6, ENST00000446122.5, ENST00000453654.6, ENST00000460662.2, ENST00000470895.5, ENST00000475388.1, ENST00000477835.5, ENST00000483619.1, ENST00000486153.1, ENST00000494390.5, ENST00000497321.5, ENST00000614521.2

Found 1127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCAGTCCTaGATGGCTATTGGCTACAGCCCAGCAGCCTGGGCTGACCCCTGG +
Preference number: 1 (lower is better)
Translates to: IGSTELYRQPKLNQS*MAIGYSPAAWADPW
Trigger: CCAGGGGTCAGCCCAGGCTGCTGGGCTGTAGCCAATAGCCATGCAGGACTGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR TCA 90 bp GAACCAGTCCTGCATGGCTATTGGCTACAGCCCAGCAGCCTGGGCTaGCCCCTGGGTTACCTCTCTGAGGTACCTCCAAGCACAGACATC +
Preference number: 1 (lower is better)
Translates to: EPVLHGYWLQPSSLG*PLGYLSEVPPSTDI
Trigger: GATGTCTGTGCTTGGAGGTACCTCAGAGAGGTAACCCAGGGGTCAGCCCAGGCTGCTGGGCTGTAGCCAATAGCCATGCAGGACTGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CCA 90 bp TCCTGCATGGCTATTGGCTACAGCCCAGCAGCCTGGGCTGACCCCTaGGTTACCTCTCTGAGGTACCTCCAAGCACAGACATCTCCCATG +
Preference number: 1 (lower is better)
Translates to: SCMAIGYSPAAWADP*VTSLRYLQAQTSPM
Trigger: CATGGGAGATGTCTGTGCTTGGAGGTACCTCAGAGAGGTAACCCAGGGGTCAGCCCAGGCTGCTGGGCTGTAGCCAATAGCCATGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CCA 90 bp AAGCTGAACCAGTCCTGCATGGCTATTGGCTACAGCCCAGCAGCCTaGGCTGACCCCTGGGTTACCTCTCTGAGGTACCTCCAAGCACAG +
Preference number: 1 (lower is better)
Translates to: KLNQSCMAIGYSPAA*ADPWVTSLRYLQAQ
Trigger: CTGTGCTTGGAGGTACCTCAGAGAGGTAACCCAGGGGTCAGCCCAGGCTGCTGGGCTGTAGCCAATAGCCATGCAGGACTGGTTCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR GCA 90 bp CAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCCCAATTaGAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGCC +
Preference number: 1 (lower is better)
Translates to: QIYEFHQLLPGELPN*REGRCDTLAHVLFA
Trigger: GGCAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR GCA 90 bp GAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTaGCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCC +
Preference number: 1 (lower is better)
Translates to: ERDRYMNSISFFQGS*PIAGRADVIRLLMS
Trigger: GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR GCA 90 bp ACAGCTGCTACTTGTTTATGGATTCCACCTGCCAGCTGGCAGCTTTaGAAAAGCATGGCTCTGGGATGTGATAGGGCAGAATCAGAAATC +
Preference number: 1 (lower is better)
Translates to: TAATCLWIPPASWQL*KSMALGCDRAESEI
Trigger: GATTTCTGATTCTGCCCTATCACATCCCAGAGCCATGCTTTTGCAAAGCTGCCAGCTGGCAGGTGGAATCCATAAACAAGTAGCAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR GCA 90 bp CCTTGGTTGAATTTCCAGCCCATGCTGGACACCCTGGGGTTCTCCTaGACTGCACTTATCACATTGGAATTTGTCTTTTCTTCTAGATGC +
Preference number: 1 (lower is better)
Translates to: PWLNFQPMLDTLGFS*TALITLEFVFSSRC
Trigger: GCATCTAGAAGAAAAGACAAATTCCAATGTGATAAGTGCAGTGCAGGAGAACCCCAGGGTGTCCAGCATGGGCTGGAAATTCAACCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR GCA 90 bp TTCTCAGTGATTTCATTAGCTACTCCTTCTGGAAGGAAGACAAGCTaGTCAGACCCCCATACTACACTGAAGTTACACCTTCCCGGAAGT +
Preference number: 1 (lower is better)
Translates to: FSVISLATPSGRKTS*SDPHTTLKLHLPGS
Trigger: ACTTCCGGGAAGGTGTAACTTCAGTGTAGTATGGGGGTCTGAGCAGCTTGTCTTCCTTCCAGAAGGAGTAGCTAATGAAATCACTGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR GCA 90 bp TGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTaGCTTTCATGTACATTTACTTGGCTCCCAAATACCTTACAGGCA +
Preference number: 1 (lower is better)
Translates to: CGCHAGGRSQRVFHD*LSCTFTWLPNTLQA
Trigger: TGCCTGTAAGGTATTTGGGAGCCAAGTAAATGTACATGAAAGGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR GCA 90 bp GATGAAAATGAAGTGATGTTGAGTAGCTCCCAGCACAGGCAGATCTaGCAAAGCAGCCATTCTGAAAGGATAAGGAGCAACAGGTATGTA +
Preference number: 1 (lower is better)
Translates to: DENEVMLSSSQHRQI*QSSHSERIRSNRYV
Trigger: TACATACCTGTTGCTCCTTATCCTTTCAGAATGGCTGCTTTGGCAGATCTGCCTGTGCTGGGAGCTACTCAACATCACTTCATTTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR TCA 90 bp TGTATTGGCAGAGGATATAGAATTTCCCACCCTCTTCTCCAGTCCTaGCTCTACATCCCAAACAACAAATGGGTAGTAAGTAGGGGAAAG +
Preference number: 1 (lower is better)
Translates to: CIGRGYRISHPLLQS*LYIPNNKWVVSRGK
Trigger: CTTTCCCCTACTTACTACCCATTTGTTGTTTGGGATGTAGAGTCAGGACTGGAGAAGAGGGTGGGAAATTCTATATCCTCTGCCAATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CCA 90 bp TTTATGCCCCCAAACCAGAGGCAAGAAGTAGAACAAGAAAGAAGGTaGAGTAGAAGCAGGTCTTTTCTGCAAGACTCTGGATATGGATTC +
Preference number: 1 (lower is better)
Translates to: FMPPNQRQEVEQERR*SRSRSFLQDSGYGF
Trigger: GAATCCATATCCAGAGTCTTGCAGAAAAGACCTGCTTCTACTCCACCTTCTTTCTTGTTCTACTTCTTGCCTCTGGTTTGGGGGCATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR TCA 90 bp GTCAGTAAATCTCAGTGTCCTGGGAGAGGAGGTTGTCCAAGGGCATaGCTCTTTTCTTGGTTCTTATTTTCAGGTTTCTCATTAAGCTGT +
Preference number: 1 (lower is better)
Translates to: VSKSQCPGRGGCPRA*LFSWFLFSGFSLSC
Trigger: ACAGCTTAATGAGAAACCTGAAAATAAGAACCAAGAAAAGAGTCATGCCCTTGGACAACCTCCTCTCCCAGGACACTGAGATTTACTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CCA 90 bp CAGAAGTTCATGCTACTTGCTGGAAGCAATAAGGATCAAATTTTGTaGAACTCGTACTGTATTCCACAAATCTCCAGGTATCCTGCCTCC +
Preference number: 1 (lower is better)
Translates to: QKFMLLAGSNKDQIL*NSYCIPQISRYPAS
Trigger: GGAGGCAGGATACCTGGAGATTTGTGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAGCATGAACTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR TCA 90 bp ACCATTCGATCCGTGGCAGGTTTAGATGTTACAATTCTAACTATCTaGCAGACATTTCTGGCTAGATTCCAATGGTGGTTTGCACTAAGG +
Preference number: 1 (lower is better)
Translates to: TIRSVAGLDVTILTI*QTFLARFQWWFALR
Trigger: CCTTAGTGCAAACCACCATTGGAATCTAGCCAGAAATGTCTGTCAGATAGTTAGAATTGTAACATCTAAACCTGCCACGGATCGAATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CCA 90 bp CACATACAAGCAACAGTGTTCATCAGTGTTAACCGTATTTATTTTTaGGAAGTGGGACACAACACCAGAACAAAGGGATGCCTTGACTGT +
Preference number: 1 (lower is better)
Translates to: HIQATVFISVNRIYF*EVGHNTRTKGCLDC
Trigger: ACAGTCAAGGCATCCCTTTGTTCTGGTGTTGTGTCCCACTTCCCAAAAATAAATACGGTTAACACTGATGAACACTGTTGCTTGTATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR GCA 90 bp AAATTCTCCTGGAGCATATTTTTCCAGCTTCTGGAAACAATCTGCTaGAGTGTCTCCTGTAATATCCAAAGGATAGTTCCATTTCTGAGG +
Preference number: 1 (lower is better)
Translates to: KFSWSIFFQLLETIC*SVSCNIQRIVPFLR
Trigger: CCTCAGAAATGGAACTATCCTTTGGATATTACAGGAGACACTGCAGCAGATTGTTTCCAGAAGCTGGAAAAATATGCTCCAGGAGAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR GCA 90 bp GGTAAGTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATaGTTGTATGTAATTAGAGTCTCAATCCAACCAATGATGGGTGGG +
Preference number: 1 (lower is better)
Translates to: GKSGRASKFYLHWKL*LYVIRVSIQPMMGG
Trigger: CCCACCCATCATTGGTTGGATTGAGACTCTAATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGACTTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CCA 90 bp CTAGGCAACCTACTGAGTGTTAGTGTTACAAACAGCCTTGTAAAGTaGTGTAAGCATCACAGAGGAAAGAACTCTCCTTTACTTGAAATA +
Preference number: 1 (lower is better)
Translates to: LGNLLSVSVTNSLVK*CKHHRGKNSPLLEI
Trigger: TATTTCAAGTAAAGGAGAGTTCTTTCCTCTGTGATGCTTACACCACTTTACAAGGCTGTTTGTAACACTAACACTCAGTAGGTTGCCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR TCA 90 bp TGCGTATATACATACATACTTGTGCATGAACGGATGGGGTATTTCTaGCATCACATACAAGCAACAGTGTTCATCAGTGTTAACCGTATT +
Preference number: 1 (lower is better)
Translates to: CVYTYILVHERMGYF*HHIQATVFISVNRI
Trigger: AATACGGTTAACACTGATGAACACTGTTGCTTGTATGTGATGTCAGAAATACCCCATCCGTTCATGCACAAGTATGTATGTATATACGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CCA 90 bp TTAGAATATTTTGTCTATGAGAGTTCTAAATCTCCTTCCCCAGGATaGCAAGAATCCAAACTTTCCCAACTTATAATCGGTAAGTCAGGG +
Preference number: 1 (lower is better)
Translates to: LEYFVYESSKSPSPG*QESKLSQLIIGKSG
Trigger: CCCTGACTTACCGATTATAAGTTGGGAAAGTTTGGATTCTTGCCATCCTGGGGAAGGAGATTTAGAACTCTCATAGACAAAATATTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CCA 90 bp AGAAGCCAAAGAGTTTTCCATGATTGCCTTTCATGTACATTTACTTaGCTCCCAAATACCTTACAGGCAGAATTTTCTTCTGTGGTTATA +
Preference number: 1 (lower is better)
Translates to: RSQRVFHDCLSCTFT*LPNTLQAEFSSVVI
Trigger: TATAACCACAGAAGAAAATTCTGCCTGTAAGGTATTTGGGAGCCAAGTAAATGTACATGAAAGGCAATCATGGAAAACTCTTTGGCTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR TCA 90 bp TGTATCCAACAGTCTATAGTTATTAGCCTCTGTGCAACATTCCAATaGCTGTTTCCTATTTCAGTGACATATGTTGACATATGTTGCTAC +
Preference number: 1 (lower is better)
Translates to: CIQQSIVISLCATFQ*LFPISVTYVDICCY
Trigger: GTAGCAACATATGTCAACATATGTCACTGAAATAGGAAACAGTCATTGGAATGTTGCACAGAGGCTAATAACTATAGACTGTTGGATACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR TCA 90 bp TTCTACATATTCACCAATCTGCCCATAAATGTCCCTTGTAAAGTATaGGATTCTGAACTGAAGGACATTTCAAGCCTGTTTGTTTTTCTC +
Preference number: 1 (lower is better)
Translates to: FYIFTNLPINVPCKV*DSELKDISSLFVFL
Trigger: GAGAAAAACAAACAGGCTTGAAATGTCCTTCAGTTCAGAATCTCATACTTTACAAGGGACATTTATGGGCAGATTGGTGAATATGTAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CCA 90 bp CTTATAATCGGTAAGTCAGGGAGAGCATCAAAGTTCTACTTGCATTaGAAATTATGCTTGTATGTAATTAGAGTCTCAATCCAACCAATG +
Preference number: 1 (lower is better)
Translates to: LIIGKSGRASKFYLH*KLCLYVIRVSIQPM
Trigger: CATTGGTTGGATTGAGACTCTAATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGACTTACCGATTATAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp AAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCATACAGCCCAGCAGCCTaGGCTGACCCCTGGGTTACC +
Preference number: 2 (lower is better)
Translates to: KMATHRQYGAVQTAQAEPYSPAA*ADPWVT
Trigger: GGTAACCCAGGGGTCAGCCCAGGCTGCTGGGCTGTA...TGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCGTCCTGCATGGCTATTaGCTACAGCCCAGCAGCCTG +
Preference number: 2 (lower is better)
Translates to: SLVVATLVAEAKEFSMIAVLHGY*LQPSSL
Trigger: CAGGCTGCTGGGCTGTAGCCAATAGCCATGCAGGAC...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCCCTGGGTTACCTCTCTaGGGTACCTCCAAGCACAGA +
Preference number: 2 (lower is better)
Translates to: SLVVATLVAEAKEFSMIAPGLPL*GTSKHR
Trigger: TCTGTGCTTGGAGGTACCTCAGAGAGGTAACCCAGG...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR GCA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCGTTCAGGGACAGGACTaGCGCTATGGCCCAAAACTT +
Preference number: 2 (lower is better)
Translates to: SLVVATLVAEAKEFSMIAVQGQD*RYGPKL
Trigger: AAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAAC...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGACCTGGGTTACCTCTCTaGGGTACCTCCAAGCACAGA +
Preference number: 2 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLRPGLPL*GTSKHR
Trigger: TCTGTGCTTGGAGGTACCTCAGAGAGGTAACCCAGG...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCACCCAGCAGCCTGGGCTaGCCCCTGGGTTACCTCTCT +
Preference number: 2 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPPSSLG*PLGYLS
Trigger: AGAGAGGTAACCCAGGGGTCAGCCCAGGCTGCTGGG...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTCCCAGCAGCCTGGGCTaGCCCCTGGGTTACCTCTCT +
Preference number: 2 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVPSSLG*PLGYLS
Trigger: AGAGAGGTAACCCAGGGGTCAGCCCAGGCTGCTGGG...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CAA 90 bp GAACCAAAACATTGCTGGCTAATGAGTGGCTGGTACAATAAAGCCTaGGTTGAATTTCCAGCCCATGCTGGACACCCTGGGGTTCTCCTG +
Preference number: 2 (lower is better)
Translates to: EPKHCWLMSGWYNKA*VEFPAHAGHPGVLL
Trigger: CAGGAGAACCCCAGGGTGTCCAGCATGGGCTGGAAATTCAACCAAGGCTTTATTGTACCAGCCACTCATTAGCCAGCAATGTTTTGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR GCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGATTCTTCCAGGGGAGCTaGCCAATTGCAGGGAGGGCA +
Preference number: 2 (lower is better)
Translates to: ALYNVTATLHTDVAFASGFFQGS*PIAGRA
Trigger: TGCCCTCCCTGCAATTGGGCAGCTCCCCTGGAAGAA...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCAATGAAACGGAGGGTTaGCGGGTGAGGGGGACATGC +
Preference number: 2 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSNETEG*RVRGTC
Trigger: GCATGTCCCCCTCACCCGCCAACCCTCCGTTTCATT...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCCTGGCTAGATTCCAATaGTGGTTTGCACTAAGGACT +
Preference number: 2 (lower is better)
Translates to: SLVVATLVAEAKEFSMIALARFQ*WFALRT
Trigger: AGTCCTTAGTGCAAACCACCATTGGAATCTAGCCAG...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCATTAGCTACTCCTTCTaGAAGGAAGACAAGCTGCTC +
Preference number: 2 (lower is better)
Translates to: SLVVATLVAEAKEFSMIAISYSF*KEDKLL
Trigger: GAGCAGCTTGTCTTCCTTCCAGAAGGAGTAGCTAAT...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp GTCAGCCAAGCTAGCTGCCTCTTCAGTGCTGTCTCAGTAGGCTTTGTAGAAATGCCAGCAAAAGCCCAGTaGTTAAATTCTCCTGGAGCA +
Preference number: 2 (lower is better)
Translates to: VSQASCLFSAVSVGFVEMPAKAQ*LNSPGA
Trigger: TGCTCCAGGAGAATTTAATCACTGGGCTTTTGCTGG...CATTTCTACAAAGCCTACTGAGACAGCACTGAAGAGGCAGCTAGCTTGGCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp AAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCACTGCCTCCTTCTCAATaGGCTATCATGTTCTGTTGT +
Preference number: 2 (lower is better)
Translates to: KMATHRQYGAVQTAQAEPLPPSQ*AIMFCC
Trigger: ACAACAGAACATGATAGCCCATTGAGAAGGAGGCAG...TGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCAAATGAAACGGAGGGTTaGCGGGTGAGGGGGACATGC +
Preference number: 2 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPNETEG*RVRGTC
Trigger: GCATGTCCCCCTCACCCGCCAACCCTCCGTTTCATT...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp GTCAGCCAAGCTAGCTGCCTCTTCAGTGCTGTCTCAGTAGGCTTTGTAGAAATGGTCATCACATTTCCTTaGCAGTCCCGCCAACTAAAA +
Preference number: 2 (lower is better)
Translates to: VSQASCLFSAVSVGFVEMVITFP*QSRQLK
Trigger: TTTTAGTTGGCGGGACTGTCAAGGAAATGTGATGAC...CATTTCTACAAAGCCTACTGAGACAGCACTGAAGAGGCAGCTAGCTTGGCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR GCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGTTCTTCCAGGGGAGCTaGCCAATTGCAGGGAGGGCA +
Preference number: 2 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWFFQGS*PIAGRA
Trigger: TGCCCTCCCTGCAATTGGGCAGCTCCCCTGGAAGAA...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR GCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGAGTCAGCCAAGCTAGCTaGCTCTTCAGTGCTGTCTCA +
Preference number: 2 (lower is better)
Translates to: ALYNVTATLHTDVAFASGVSQAS*LFSAVS
Trigger: TGAGACAGCACTGAAGAGGCAGCTAGCTTGGCTGAC...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTTTGACATTATCCATGTaGCACTTCCCAGCTCCTATA +
Preference number: 2 (lower is better)
Translates to: KAKMATHRQYGAVQTAQALTLSM*HFPAPI
Trigger: TATAGGAGCTGGGAAGTGCCACATGGATAATGTCAA...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGCAGGGAGGGCAGATGTaGTACGCTTGCTCATGTCCT +
Preference number: 2 (lower is better)
Translates to: LEGLQTILWSSKTECKEKQGGQM*YACSCP
Trigger: AGGACATGAGCAAGCGTATCACATCTGCCCTCCCTG...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCATAAGCTTGCAAAAATaGCTACCTTTCAGGTTACAG +
Preference number: 2 (lower is better)
Translates to: SLVVATLVAEAKEFSMIAISLQK*LPFRLQ
Trigger: CTGTAACCTGAAAGGTAGTCATTTTTGCAAGCTTAT...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCCATAATTCTATAAGATaGTCAAGGTCAGTGGACATC +
Preference number: 2 (lower is better)
Translates to: SLVVATLVAEAKEFSMIAHNSIR*SRSVDI
Trigger: GATGTCCACTGACCTTGATCATCTTATAGAATTATG...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGATGTGGCTTACATTGTTaGATGAGGAAGCAGCAGCCG +
Preference number: 2 (lower is better)
Translates to: ALYNVTATLHTDVAFASGCGLHC*MRKQQP
Trigger: CGGCTGCTGCTTCCTCATTCAACAATGTAAGCCACA...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGAGAACTATGTACAAGCTaGCAAGCCTCTCTCCGACAG +
Preference number: 2 (lower is better)
Translates to: ALYNVTATLHTDVAFASGELCTS*QASLRQ
Trigger: CTGTCGGAGAGAGGCTTGTCAGCTTGTACATAGTTC...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR GCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGTTCTTCCAGGGGAGCTaGCCAATTGCAGGGAGGGCA +
Preference number: 2 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVFFQGS*PIAGRA
Trigger: TGCCCTCCCTGCAATTGGGCAGCTCCCCTGGAAGAA...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCACAGGGAGGGCAGATGTaGTACGCTTGCTCATGTCCT +
Preference number: 2 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPQGGQM*YACSCP
Trigger: AGGACATGAGCAAGCGTATCACATCTGCCCTCCCTG...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGATGTGCAACATTCCAATaGCTGTTTCCTATTTCAGTG +
Preference number: 2 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLRCATFQ*LFPISV
Trigger: CACTGAAATAGGAAACAGTCATTGGAATGTTGCACA...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGAGCTTGGCCAAACATTTaGCTCAATCCAGGGAATGGA +
Preference number: 2 (lower is better)
Translates to: ALYNVTATLHTDVAFASGAWPNI*LNPGNG
Trigger: TCCATTCCCTGGATTGAGTCAAATGTTTGGCCAAGC...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR GCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCAATCTCCAGGTATCCTaGCTCCTTCTCAATGGGCTA +
Preference number: 2 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSNLQVS*LLLNGL
Trigger: TAGCCCATTGAGAAGGAGGCAGGATACCTGGAGATT...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR GCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCGGGAGGATGGAGCAGTaGCATTTATACGAACATCCT +
Preference number: 2 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSGRMEQ*HLYEHP
Trigger: AGGATGTTCGTATAAATGGCACTGCTCCATCCTCCC...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR GCA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTCAGCACAGGCAGATCTaGCAAAGCAGCCATTCTGAA +
Preference number: 2 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVQHRQI*QSSHSE
Trigger: TTCAGAATGGCTGCTTTGGCAGATCTGCCTGTGCTG...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCAAGGATCAAATTTTGTaGAACTCGTACTGTATTCCA +
Preference number: 2 (lower is better)
Translates to: SLVVATLVAEAKEFSMIAKDQIL*NSYCIP
Trigger: TGGAATACAGTACGAGTTCCACAAAATTTGATCCTT...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp GTCAGCCAAGCTAGCTGCCTCTTCAGTGCTGTCTCAGTAGGCTTTGTAGAAATGCTGCTCACTTTATTTTaGAAATCCCAAGTCCTAGTG +
Preference number: 2 (lower is better)
Translates to: VSQASCLFSAVSVGFVEMLLTLF*KSQVLV
Trigger: CACTAGGACTTGGGATTTCCAAAATAAAGTGAGCAG...CATTTCTACAAAGCCTACTGAGACAGCACTGAAGAGGCAGCTAGCTTGGCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCTTTGAGCATAATATCTaGGGAAGATTTTTGCAACTG +
Preference number: 2 (lower is better)
Translates to: SLVVATLVAEAKEFSMIAFEHNI*GRFLQL
Trigger: CAGTTGCAAAAATCTTCCCCAGATATTATGCTCAAA...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CAA 90 bp TGTTTCATGACACAAAGTTATAGAAAGTGCCTCCATGCCTCTGTATaGGCAGAGGATATAGAATTTCCCACCCTCTTCTCCAGTCCTGAC +
Preference number: 2 (lower is better)
Translates to: CFMTQSYRKCLHASV*AEDIEFPTLFSSPD
Trigger: GTCAGGACTGGAGAAGAGGGTGGGAAATTCTATATCCTCTGCCAATACAGAGGCATGGAGGCACTTTCTATAACTTTGTGTCATGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CAA 90 bp GGGACCAGAACAAGTTTGTGGACAGGCATAATGTATTATAAGAGGTaGGACAAACTCCTTCCAAAAACCACCTCGTCCTTTGGAAAGCTC +
Preference number: 2 (lower is better)
Translates to: GTRTSLWTGIMYYKR*DKLLPKTTSSFGKL
Trigger: GAGCTTTCCAAAGGACGAGGTGGTTTTTGGAAGGAGTTTGTCCAACCTCTTATAATACATTATGCCTGTCCACAAACTTGTTCTGGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATCAGGGAGGGCAGATGTaGTACGCTTGCTCATGTCCT +
Preference number: 2 (lower is better)
Translates to: VRESIKVLLALEIMLVCNQGGQM*YACSCP
Trigger: AGGACATGAGCAAGCGTATCACATCTGCCCTCCCTG...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp CTCCTAGACCATAAGGCCTTAGCTCTTTCCAAAGCCCAGGACCAATTTTTAAAAGTTGAAGCATCCTTCTaGATGATCCAGGCATCCCAT +
Preference number: 2 (lower is better)
Translates to: LLDHKALALSKAQDQFLKVEASF*MIQASH
Trigger: ATGGGATGCCTGGATCATTCAGAAGGATGCTTCAAC...TTTTAAAAATTGGTCCTGGGCTTTGGAAAGAGCTAAGGCCTTATGGTCTAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp CTCAAATCACATATTCCTAATCACAACACCCCTCAGAGTGGTCAGGTATCCTCTGTCATCACATTTCCTTaGCAGTCCCGCCAACTAAAA +
Preference number: 2 (lower is better)
Translates to: LKSHIPNHNTPQSGQVSSVITFP*QSRQLK
Trigger: TTTTAGTTGGCGGGACTGTCAAGGAAATGTGATGAC...AGAGGATACCTGACCACTCTGAGGGGTGTTGTGATTAGGAATATGTGATTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCACCCCCATACTACACTaGAGTTACACCTTCCCGGAA +
Preference number: 2 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVTPILH*SYTFPE
Trigger: TTCCGGGAAGGTGTAACTTCAGTGTAGTATGGGGGT...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGACAGAGTGAAAGGAGTTaGGAGATTCAAAGGTGGTTC +
Preference number: 2 (lower is better)
Translates to: ALYNVTATLHTDVAFASGQSERS*EIQRWF
Trigger: GAACCACCTTTGAATCTCTCAACTCCTTTCACTCTG...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR GCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGAACCAGAACAAAGGGATaGCTTGACTGTGGATGTGAT +
Preference number: 2 (lower is better)
Translates to: ALYNVTATLHTDVAFASGTRTKG*LDCGCD
Trigger: ATCACATCCACAGTCAAGGCATCCCTTTGTTCTGGT...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCCTGCCTCCTTCTCAATaGGCTATCATGTTCTGTTGT +
Preference number: 2 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSLPPSQ*AIMFCC
Trigger: ACAACAGAACATGATAGCCCATTGAGAAGGAGGCAG...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp AGGCAACATAAACAATTACAGGAACTCTTGGTCATGAATTTTATGACACAGGTAGTCCTGCATGGCTATTaGCTACAGCCCAGCAGCCTG +
Preference number: 2 (lower is better)
Translates to: RQHKQLQELLVMNFMTQVVLHGY*LQPSSL
Trigger: CAGGCTGCTGGGCTGTAGCCAATAGCCATGCAGGAC...TACCTGTGTCATAAAATTCATGACCAAGAGTTCCTGTAATTGTTTATGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp CTCAAATCACATATTCCTAATCACAACACCCCTCAGAGTGGTCAGGTATCCTCTATTAGCTACTCCTTCTaGAAGGAAGACAAGCTGCTC +
Preference number: 2 (lower is better)
Translates to: LKSHIPNHNTPQSGQVSSISYSF*KEDKLL
Trigger: GAGCAGCTTGTCTTCCTTCCAGAAGGAGTAGCTAAT...AGAGGATACCTGACCACTCTGAGGGGTGTTGTGATTAGGAATATGTGATTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR GCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGGGGAGGATGGAGCAGTaGCATTTATACGAACATCCT +
Preference number: 2 (lower is better)
Translates to: LEGLQTILWSSKTECKEKGRMEQ*HLYEHP
Trigger: AGGATGTTCGTATAAATGGCACTGCTCCATCCTCCC...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCTGCATAGGGGGAGGATaGAGCAGTGCCATTTATACG +
Preference number: 2 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTCIGGG*SSAIYT
Trigger: CGTATAAATGGCACTGCTCCATCCTCCCCCTATGCA...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATTTGTGGTTGCCACGCTaGTGGCAGAAGCCAAAGAGT +
Preference number: 2 (lower is better)
Translates to: VRESIKVLLALEIMLVCNLWLPR*WQKPKS
Trigger: ACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAA...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CAA 90 bp ACACAGAAGTTCATGCTACTTGCTGGAAGCAATAAGGATCAAATTTaGTGGAACTCGTACTGTATTCCACAAATCTCCAGGTATCCTGCC +
Preference number: 2 (lower is better)
Translates to: TQKFMLLAGSNKDQI*WNSYCIPQISRYPA
Trigger: GGCAGGATACCTGGAGATTTGTGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAGCATGAACTTCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR GCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCAAATCTCCAGGTATCCTaGCTCCTTCTCAATGGGCTA +
Preference number: 2 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPNLQVS*LLLNGL
Trigger: TAGCCCATTGAGAAGGAGGCAGGATACCTGGAGATT...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR GCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGGGAGGATGGAGCAGTaGCATTTATACGAACATCCT +
Preference number: 2 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVGRMEQ*HLYEHP
Trigger: AGGATGTTCGTATAAATGGCACTGCTCCATCCTCCC...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR GCA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCAAAATTGAGTGGTTCTaGAAACTAGCTGTGGGCCTC +
Preference number: 2 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVKIEWF*KLAVGL
Trigger: GAGGCCCACAGCTAGTTTGCAGAACCACTCAATTTT...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR GCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGATCTCAAAGCAGTCAGTaGCATGACACAAAGAAACAA +
Preference number: 2 (lower is better)
Translates to: ALYNVTATLHTDVAFASGSQSSQ*HDTKKQ
Trigger: TTGTTTCTTTGTGTCATGGCACTGACTGCTTTGAGA...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCCTTCAGACAATCTTGTaGTCTTCCAAGACTGAATGT +
Preference number: 2 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSLQTIL*SSKTEC
Trigger: ACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAG...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp CTCCTAGACCATAAGGCCTTAGCTCTTTCCAAAGCCCAGGACCAATTTTTAAAATCTGACAGACATTTCTaGCTAGATTCCAATGGTGGT +
Preference number: 2 (lower is better)
Translates to: LLDHKALALSKAQDQFLKSDRHF*LDSNGG
Trigger: ACCACCATTGGAATCTAGCCAGAAATGTCTGTCAGA...TTTTAAAAATTGGTCCTGGGCTTTGGAAAGAGCTAAGGCCTTATGGTCTAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CAA 90 bp AAGTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTaGTATGTAATTAGAGTCTCAATCCAACCAATGATGGGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: KSGRASKFYLHWKLC*YVIRVSIQPMMGGE
Trigger: CTCCCCACCCATCATTGGTTGGATTGAGACTCTAATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGACATAATTCTATAAGATaGTCAAGGTCAGTGGACATC +
Preference number: 2 (lower is better)
Translates to: ALYNVTATLHTDVAFASGHNSIR*SRSVDI
Trigger: GATGTCCACTGACCTTGATCATCTTATAGAATTATG...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGAAGACTTTTCTTTGCTTaGACTATGTACAAGCTGACA +
Preference number: 2 (lower is better)
Translates to: ALYNVTATLHTDVAFASGRLFFA*TMYKLT
Trigger: TGTCAGCTTGTACATAGTTCAAGCAAAGAAAAGTCT...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR GCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCAGAACACAGAAGTTCATaGTACTTGCTGGAAGCAATA +
Preference number: 2 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPEHRSS*YLLEAI
Trigger: TATTGCTTCCAGCAAGTAGCATGAACTTCTGTGTTC...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR GCA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGTCTCAAAGCAGTCAGTaGCATGACACAAAGAAACAA +
Preference number: 2 (lower is better)
Translates to: QVCTALHQSLLISITVHLSQSSQ*HDTKKQ
Trigger: TTGTTTCTTTGTGTCATGGCACTGACTGCTTTGAGA...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCACTGCCTCCTTCTCAATaGGCTATCATGTTCTGTTGT +
Preference number: 2 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPLPPSQ*AIMFCC
Trigger: ACAACAGAACATGATAGCCCATTGAGAAGGAGGCAG...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCCTGCCTCCTTCTCAATaGGCTATCATGTTCTGTTGT +
Preference number: 2 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTLPPSQ*AIMFCC
Trigger: ACAACAGAACATGATAGCCCATTGAGAAGGAGGCAG...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCACTTCAGACAATCTTGTaGTCTTCCAAGACTGAATGT +
Preference number: 2 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPLQTIL*SSKTEC
Trigger: ACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAG...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTGCACTTAAAATTGAGTaGTTCTGCAAACTAGCTGTG +
Preference number: 2 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVALKIE*FCKLAV
Trigger: CACAGCTAGTTTGCAGAACCACTCAATTTTAAGTGC...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGATCATGTACATTTACTTaGCTCCCAAATACCTTACAG +
Preference number: 2 (lower is better)
Translates to: ALYNVTATLHTDVAFASGSCTFT*LPNTLQ
Trigger: CTGTAAGGTATTTGGGAGCCAAGTAAATGTACATGA...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATAGCAAAAGGCAAAGATaGCTACACATAGGCAGTACG +
Preference number: 2 (lower is better)
Translates to: VRESIKVLLALEIMLVCNSKRQR*LHIGST
Trigger: CGTACTGCCTATGTGTAGCCATCTTTGCCTTTTGCT...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCGCACTTAAAATTGAGTaGTTCTGCAAACTAGCTGTG +
Preference number: 2 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVALKIE*FCKLAV
Trigger: CACAGCTAGTTTGCAGAACCACTCAATTTTAAGTGC...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATCTGGCTAGATTCCAATaGTGGTTTGCACTAAGGACT +
Preference number: 2 (lower is better)
Translates to: VRESIKVLLALEIMLVCNLARFQ*WFALRT
Trigger: AGTCCTTAGTGCAAACCACCATTGGAATCTAGCCAG...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCAGCATAGATAAGTCTTaGGGCTATGGTAGGTTTCAT +
Preference number: 2 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVSIDKS*GYGRFH
Trigger: ATGAAACCTACCATAGCCCCAAGACTTATCTATGCT...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATCTGAATTCACTGCTCTaGGATTCAGTGCATTCATCT +
Preference number: 2 (lower is better)
Translates to: VRESIKVLLALEIMLVCNLNSLL*DSVHSS
Trigger: AGATGAATGCACTGAATCTCAGAGCAGTGAATTCAG...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR GCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGAACACAGAAGTTCATaGTACTTGCTGGAAGCAATA +
Preference number: 2 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVEHRSS*YLLEAI
Trigger: TATTGCTTCCAGCAAGTAGCATGAACTTCTGTGTTC...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR GCA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTCCAAGTCAATTAGGGTaGTTTCTATTATCATTCAAC +
Preference number: 2 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVPSQLG*FLLSFN
Trigger: GTTGAATGATAATAGAAAGCACCCTAATTGACTTGG...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR GCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATCTGGAAACAATCTGCTaGAGTGTCTCCTGTAATATC +
Preference number: 2 (lower is better)
Translates to: VRESIKVLLALEIMLVCNLETIC*SVSCNI
Trigger: GATATTACAGGAGACACTGCAGCAGATTGTTTCCAG...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CAA 90 bp TGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTaGCCAGCTAAATTATGTTTCAAAACTTGCACTGGTTTTTGGTTA +
Preference number: 2 (lower is better)
Translates to: CTALHQSLLISITVH*PAKLCFKTCTGFWL
Trigger: TAACCAAAAACCAGTGCAAGTTTTGAAACATAATTTAGCTGGCAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp AGGCAACATAAACAATTACAGGAACTCTTGGTCATGAATTTTATGACACAGGTAAAGCATCCTTCTGAATaGTCCAGGCATCCCATAAAT +
Preference number: 2 (lower is better)
Translates to: RQHKQLQELLVMNFMTQVKHPSE*SRHPIN
Trigger: ATTTATGGGATGCCTGGATCATTCAGAAGGATGCTT...TACCTGTGTCATAAAATTCATGACCAAGAGTTCCTGTAATTGTTTATGTTGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR GCA 90 bp AGGCAACATAAACAATTACAGGAACTCTTGGTCATGAATTTTATGACACAGGTACTTCTGGAAACAATCTaGTGCAGTGTCTCCTGTAAT +
Preference number: 2 (lower is better)
Translates to: RQHKQLQELLVMNFMTQVLLETI*CSVSCN
Trigger: ATTACAGGAGACACTGCAGCAGATTGTTTCCAGAAG...TACCTGTGTCATAAAATTCATGACCAAGAGTTCCTGTAATTGTTTATGTTGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CAA 90 bp TCCCAACTTATAATCGGTAAGTCAGGGAGAGCATCAAAGTTCTACTaGCATTGGAAATTATGCTTGTATGTAATTAGAGTCTCAATCCAA +
Preference number: 2 (lower is better)
Translates to: SQLIIGKSGRASKFY*HWKLCLYVIRVSIQ
Trigger: TTGGATTGAGACTCTAATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGACTTACCGATTATAAGTTGGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATATACTTAAGCTGAGATaGAAACTCCTAGACCATAAG +
Preference number: 2 (lower is better)
Translates to: VRESIKVLLALEIMLVCNILKLR*KLLDHK
Trigger: CTTATGGTCTAGGAGTTTCCATCTCAGCTTAAGTAT...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR TCA 90 bp AGGCAACATAAACAATTACAGGAACTCTTGGTCATGAATTTTATGACACAGGTAACAATTCTAACTATCTaGCAGACATTTCTGGCTAGA +
Preference number: 2 (lower is better)
Translates to: RQHKQLQELLVMNFMTQVTILTI*QTFLAR
Trigger: TCTAGCCAGAAATGTCTGTCAGATAGTTAGAATTGT...TACCTGTGTCATAAAATTCATGACCAAGAGTTCCTGTAATTGTTTATGTTGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR GCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATCCAAGTCAATTAGGGTaGTTTCTATTATCATTCAAC +
Preference number: 2 (lower is better)
Translates to: VRESIKVLLALEIMLVCNPSQLG*FLLSFN
Trigger: GTTGAATGATAATAGAAAGCACCCTAATTGACTTGG...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR GCA 90 bp AGTTTTTCTAGTCCAAGATCTCTCACAATTAAAGATATGCCTTTGATCTCTGAGCCATCACTGTGCATTTaGCAGCTAAATTATGTTTCA +
Preference number: 2 (lower is better)
Translates to: SFSSPRSLTIKDMPLISEPSLCI*QLNYVS
Trigger: TGAAACATAATTTAGCTGGCAAATGCACAGTGATGG...CTCAGAGATCAAAGGCATATCTTTAATTGTGAGAGATCTTGGACTAGAAAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp AGGCAACATAAACAATTACAGGAACTCTTGGTCATGAATTTTATGACACAGGTATTTATTTTTGGGAAGTaGGACACAACACCAGAACAA +
Preference number: 2 (lower is better)
Translates to: RQHKQLQELLVMNFMTQVFIFGK*DTTPEQ
Trigger: TTGTTCTGGTGTTGTGTCCCACTTCCCAAAAATAAA...TACCTGTGTCATAAAATTCATGACCAAGAGTTCCTGTAATTGTTTATGTTGCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATTTTGAGCATAATATCTaGGGAAGATTTTTGCAACTG +
Preference number: 2 (lower is better)
Translates to: VRESIKVLLALEIMLVCNFEHNI*GRFLQL
Trigger: CAGTTGCAAAAATCTTCCCCAGATATTATGCTCAAA...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR TCA 72 bp CTGCATGGCTATTGGCTACAGCCCAGCAGCCTGGGCTaGCCCCTGGGTTACCTCTCTGAGGTACCTCCAAGC +
Preference number: 3 (lower is better)
Translates to: LHGYWLQPSSLG*PLGYLSEVPPS
Trigger: GCTTGGAGGTACCTCAGAGAGGTAACCCAGGGGTCAGCCCAGGCTGCTGGGCTGTAGCCAATAGCCATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR GCA 72 bp ACGGAGCTGTACAGACAGCCCAAGCTGAACCAGTCCTaGATGGCTATTGGCTACAGCCCAGCAGCCTGGGCT +
Preference number: 3 (lower is better)
Translates to: TELYRQPKLNQS*MAIGYSPAAWA
Trigger: AGCCCAGGCTGCTGGGCTGTAGCCAATAGCCATGCAGGACTGGTTCAGCTTGGGCTGTCTGTACAGCTCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CCA 72 bp GCTATTGGCTACAGCCCAGCAGCCTGGGCTGACCCCTaGGTTACCTCTCTGAGGTACCTCCAAGCACAGACA +
Preference number: 3 (lower is better)
Translates to: AIGYSPAAWADP*VTSLRYLQAQT
Trigger: TGTCTGTGCTTGGAGGTACCTCAGAGAGGTAACCCAGGGGTCAGCCCAGGCTGCTGGGCTGTAGCCAATAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR TCA 72 bp TCCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTaGTACGCTTGCTCATGTCCTCTTTGCCCGAATACC +
Preference number: 3 (lower is better)
Translates to: SRGAAQLQGGQM*YACSCPLCPNT
Trigger: GGTATTCGGGCAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR TCA 72 bp CTGGGGACACAGAAAAGGGTAGGGTCCAAGTCGATCTaGCAGACCTGGCAGAGAAGGACCTGTAGGACTTCT +
Preference number: 3 (lower is better)
Translates to: LGTQKRVGSKSI*QTWQRRTCRTS
Trigger: AGAAGTCCTACAGGTCCTTCTCTGCCAGGTCTGTCAGATCGACTTGGACCCTACCCTTTTCTGTGTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR TCA 72 bp CTCCCAGCACAGGCAGATCTGCCAAAGCAGCCATTCTaGAAGGATAAGGAGCAACAGGTATGTACGGCTCTC +
Preference number: 3 (lower is better)
Translates to: LPAQADLPKQPF*KDKEQQVCTAL
Trigger: GAGAGCCGTACATACCTGTTGCTCCTTATCCTTTCAGAATGGCTGCTTTGGCAGATCTGCCTGTGCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CCA 72 bp CCTTTGCGAGTGGAATACCCACAGCCAAGGGTACCCTaGATGCCTGGGAACGTTTTCCCACTCAGAAATCAA +
Preference number: 3 (lower is better)
Translates to: PLRVEYPQPRVP*MPGNVFPLRNQ
Trigger: TTGATTTCTGAGTGGGAAAACGTTCCCAGGCATCCAGGGTACCCTTGGCTGTGGGTATTCCACTCGCAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CCA 72 bp GACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTaGAATACCCACAGCCAAGGGTACCCTGGATGCCTG +
Preference number: 3 (lower is better)
Translates to: DCNSSYRCSLCE*NTHSQGYPGCL
Trigger: CAGGCATCCAGGGTACCCTTGGCTGTGGGTATTCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGCAGATGTGATACGCTaGCTCATGTCCTCTTTGCCC +
Preference number: 3 (lower is better)
Translates to: KAKMATHRQYGAVQTAQAADVIR*LMSSLP
Trigger: GGGCAAAGAGGACATGAGCAAGCGTATCACATCTGC...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCGGCATGTGGCTTACATaGTTGAATGAGGAAGCAGCA +
Preference number: 3 (lower is better)
Translates to: SLVVATLVAEAKEFSMIAGMWLT*LNEEAA
Trigger: TGCTGCTTCCTCATTCAACAATGTAAGCCACATGCC...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR TCA 72 bp GAAGGAAGACAAGCTGCTCAGACCCCCATACTACACTaGAGTTACACCTTCCCGGAAGTAGCCTGCCCTAAT +
Preference number: 3 (lower is better)
Translates to: EGRQAAQTPILH*SYTFPEVACPN
Trigger: ATTAGGGCAGGCTACTTCCGGGAAGGTGTAACTTCAGTGTAGTATGGGGGTCTGAGCAGCTTGTCTTCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR TCA 72 bp GTGCCGTCAAAGAGGCATGTGGCTTACATTGTTGAATaGGGAAGCAGCAGCCGTGATTGTGTACCCTCATGG +
Preference number: 3 (lower is better)
Translates to: VPSKRHVAYIVE*GSSSRDCVPSW
Trigger: CCATGAGGGTACACAATCACGGCTGCTGCTTCCTCATTCAACAATGTAAGCCACATGCCTCTTTGACGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR GCA 72 bp AGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTaGCCAATTGCAGGGAGGGCAGATGTGATACGCTTG +
Preference number: 3 (lower is better)
Translates to: RYMNSISFFQGS*PIAGRADVIRL
Trigger: CAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR GCA 72 bp GAAGTGATGTTGAGTAGCTCCCAGCACAGGCAGATCTaGCAAAGCAGCCATTCTGAAAGGATAAGGAGCAAC +
Preference number: 3 (lower is better)
Translates to: EVMLSSSQHRQI*QSSHSERIRSN
Trigger: GTTGCTCCTTATCCTTTCAGAATGGCTGCTTTGGCAGATCTGCCTGTGCTGGGAGCTACTCAACATCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR GCA 72 bp TGCGAGTGGAATACCCACAGCCAAGGGTACCCTGGATaGCTGGGAACGTTTTCCCACTCAGAAATCAAATTA +
Preference number: 3 (lower is better)
Translates to: CEWNTHSQGYPG*LGTFSHSEIKL
Trigger: TAATTTGATTTCTGAGTGGGAAAACGTTCCCAGGCATCCAGGGTACCCTTGGCTGTGGGTATTCCACTCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR GCA 72 bp ACTTGTTTATGGATTCCACCTGCCAGCTGGCAGCTTTaGAAAAGCATGGCTCTGGGATGTGATAGGGCAGAA +
Preference number: 3 (lower is better)
Translates to: TCLWIPPASWQL*KSMALGCDRAE
Trigger: TTCTGCCCTATCACATCCCAGAGCCATGCTTTTGCAAAGCTGCCAGCTGGCAGGTGGAATCCATAAACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGAGGCCTTCAGACAATCTaGTGGTCTTCCAAGACTGAA +
Preference number: 3 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLRGLQTI*WSSKTE
Trigger: TTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCC...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp AAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCAGATATAGCACACAAGTaGACATTATCCATGTGGCAC +
Preference number: 3 (lower is better)
Translates to: KMATHRQYGAVQTAQAEPDIAHK*TLSMWH
Trigger: GTGCCACATGGATAATGTCAACTTGTGTGCTATATC...TGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGCAGATGTGATACGCTaGCTCATGTCCTCTTTGCCC +
Preference number: 3 (lower is better)
Translates to: GRFLQERDRYMNSISFFQADVIR*LMSSLP
Trigger: GGGCAAAGAGGACATGAGCAAGCGTATCACATCTGC...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGACCCACACAGGATTATTaGCTCTGCAATTTAAACAGC +
Preference number: 3 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLRPTQDY*LCNLNS
Trigger: GCTGTTTAAATTGCAGAGCAAATAATCCTGTGTGGG...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGAGGAGGTGGTTTAATGTaGAAGCCATTAAACATGTGG +
Preference number: 3 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLRGGGLM*KPLNMW
Trigger: CCACATGTTTAATGGCTTCAACATTAAACCACCTCC...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR GCA 72 bp ATTGACAGTAGTAGGCAGAAAGTTCAGGGACAGGACTaGCGCTATGGCCCAAAACTTAGAGAGACAAGAGAT +
Preference number: 3 (lower is better)
Translates to: IDSSRQKVQGQD*RYGPKLRETRD
Trigger: ATCTCTTGTCTCTCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACTGTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CCA 72 bp CCTTTGCTCATCTTCTATTGCAGCAAAAGGCAAAGATaGCTACACATAGGCAGTACGGAGCTGTACAGACAG +
Preference number: 3 (lower is better)
Translates to: PLLIFYCSKRQR*LHIGSTELYRQ
Trigger: CTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTTTTGCTGCAATAGAAGATGAGCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGGCAGATGTGATACGCTaGCTCATGTCCTCTTTGCCC +
Preference number: 3 (lower is better)
Translates to: LEGLQTILWSSKTECKEKADVIR*LMSSLP
Trigger: GGGCAAAGAGGACATGAGCAAGCGTATCACATCTGC...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp CTCAAATCACATATTCCTAATCACAACACCCCTCAGAGTGGTCAGGTATCCTCTTGCTTGGCCAAACATTaGACTCAATCCAGGGAATGG +
Preference number: 3 (lower is better)
Translates to: LKSHIPNHNTPQSGQVSSCLAKH*TQSREW
Trigger: CCATTCCCTGGATTGAGTCAAATGTTTGGCCAAGCA...AGAGGATACCTGACCACTCTGAGGGGTGTTGTGATTAGGAATATGTGATTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGAGAACAAAGGGATGCCTaGACTGTGGATGTGATACTC +
Preference number: 3 (lower is better)
Translates to: ALYNVTATLHTDVAFASGEQRDA*TVDVIL
Trigger: GAGTATCACATCCACAGTCAAGGCATCCCTTTGTTC...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR GCA 72 bp TTTTGGGAAGTGGGACACAACACCAGAACAAAGGGATaGCTTGACTGTGGATGTGATACTCATCTGTGGTAT +
Preference number: 3 (lower is better)
Translates to: FWEVGHNTRTKG*LDCGCDTHLWY
Trigger: ATACCACAGATGAGTATCACATCCACAGTCAAGGCATCCCTTTGTTCTGGTGTTGTGTCCCACTTCCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR GCA 72 bp CACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTaGCTTTCATGTACATTTACTTGGCTCCCAAATACC +
Preference number: 3 (lower is better)
Translates to: HAGGRSQRVFHD*LSCTFTWLPNT
Trigger: GGTATTTGGGAGCCAAGTAAATGTACATGAAAGGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTGGCCTTCAGACAATCTaGTGGTCTTCCAAGACTGAA +
Preference number: 3 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVGLQTI*WSSKTE
Trigger: TTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCC...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp AGGCAACATAAACAATTACAGGAACTCTTGGTCATGAATTTTATGACACAGGTAAGTCCTGCATGGCTATaGGCTACAGCCCAGCAGCCT +
Preference number: 3 (lower is better)
Translates to: RQHKQLQELLVMNFMTQVSPAWL*ATAQQP
Trigger: AGGCTGCTGGGCTGTAGCCAATAGCCATGCAGGACT...TACCTGTGTCATAAAATTCATGACCAAGAGTTCCTGTAATTGTTTATGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR TCA 72 bp CCACCCTGGTATGCAAACATTAGACTTTTCTTTGCTTaGACTATGTACAAGCTGACAAGCCTCTCTCCGACA +
Preference number: 3 (lower is better)
Translates to: PPWYANIRLFFA*TMYKLTSLSPT
Trigger: TGTCGGAGAGAGGCTTGTCAGCTTGTACATAGTTCAAGCAAAGAAAAGTCTAATGTTTGCATACCAGGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR GCA 72 bp ATTTCATTAGCTACTCCTTCTGGAAGGAAGACAAGCTaGTCAGACCCCCATACTACACTGAAGTTACACCTT +
Preference number: 3 (lower is better)
Translates to: ISLATPSGRKTS*SDPHTTLKLHL
Trigger: AAGGTGTAACTTCAGTGTAGTATGGGGGTCTGAGCAGCTTGTCTTCCTTCCAGAAGGAGTAGCTAATGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp CTCAAATCACATATTCCTAATCACAACACCCCTCAGAGTGGTCAGGTATCCTCTGGAGGTGGTTTAATGTaGAAGCCATTAAACATGTGG +
Preference number: 3 (lower is better)
Translates to: LKSHIPNHNTPQSGQVSSGGGLM*KPLNMW
Trigger: CCACATGTTTAATGGCTTCAACATTAAACCACCTCC...AGAGGATACCTGACCACTCTGAGGGGTGTTGTGATTAGGAATATGTGATTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR TCA 72 bp AGAGGATATAGAATTTCCCACCCTCTTCTCCAGTCCTaGCTCTACATCCCAAACAACAAATGGGTAGTAAGT +
Preference number: 3 (lower is better)
Translates to: RGYRISHPLLQS*LYIPNNKWVVS
Trigger: ACTTACTACCCATTTGTTGTTTGGGATGTAGAGTCAGGACTGGAGAAGAGGGTGGGAAATTCTATATCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTGATATAGCACACAAGTaGACATTATCCATGTGGCAC +
Preference number: 3 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVDIAHK*TLSMWH
Trigger: GTGCCACATGGATAATGTCAACTTGTGTGCTATATC...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp CTCCTAGACCATAAGGCCTTAGCTCTTTCCAAAGCCCAGGACCAATTTTTAAAAAACAAGCCTTTGTTCTaGGGTCAAGGATTACTTGGA +
Preference number: 3 (lower is better)
Translates to: LLDHKALALSKAQDQFLKNKPLF*GQGLLG
Trigger: TCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTT...TTTTAAAAATTGGTCCTGGGCTTTGGAAAGAGCTAAGGCCTTATGGTCTAGGAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGAAACTTGCACTGGTTTTaGGTTATCACATCTACAGAG +
Preference number: 3 (lower is better)
Translates to: ALYNVTATLHTDVAFASGNLHWF*VITSTE
Trigger: CTCTGTAGATGTGATAACCAAAAACCAGTGCAAGTT...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR TCA 72 bp AAGATGATCAAGGTCAGTGGACATCCATGTGTCCTTTaGGTAAAAGGTATACTTGTCCCAGAGGGTAATTTC +
Preference number: 3 (lower is better)
Translates to: KMIKVSGHPCVL*VKGILVPEGNF
Trigger: GAAATTACCCTCTGGGACAAGTATACCTTTTACTCAAAGGACACATGGATGTCCACTGACCTTGATCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR TCA 72 bp TTCTTGGTTCTTATTTTCAGGTTTCTCATTAAGCTGTaGGGAGACAGTGTAAAACCAAAGATGGCCCTCAGC +
Preference number: 3 (lower is better)
Translates to: FLVLIFRFLIKL*GDSVKPKMALS
Trigger: GCTGAGGGCCATCTTTGGTTTTACACTGTCTCCTCACAGCTTAATGAGAAACCTGAAAATAAGAACCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR GCA 72 bp TGGAGCATATTTTTCCAGCTTCTGGAAACAATCTGCTaGAGTGTCTCCTGTAATATCCAAAGGATAGTTCCA +
Preference number: 3 (lower is better)
Translates to: WSIFFQLLETIC*SVSCNIQRIVP
Trigger: TGGAACTATCCTTTGGATATTACAGGAGACACTGCAGCAGATTGTTTCCAGAAGCTGGAAAAATATGCTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR GCA 72 bp CAACCACATCTAAAAATGGAATCTCAAAGCAGTCAGTaGCATGACACAAAGAAACAAACACAGAGGAGTCAG +
Preference number: 3 (lower is better)
Translates to: QPHLKMESQSSQ*HDTKKQTQRSQ
Trigger: CTGACTCCTCTGTGTTTGTTTCTTTGTGTCATGGCACTGACTGCTTTGAGATTCCATTTTTAGATGTGGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCAGTCTCAGGTAGATTCTaGCAGGAGAGAGACAGATAT +
Preference number: 3 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPVSGRF*QERDRY
Trigger: ATATCTGTCTCTCTCCTGCAAGAATCTACCTGAGAC...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCAGGCTATCATGTTCTGTaGTACATCTTGGTAGCCCTT +
Preference number: 3 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPGYHVL*YILVAL
Trigger: AAGGGCTACCAAGATGTACAACAGAACATGATAGCC...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCATCATACAACAAGCCTTaGTTCTTGGGTCAAGGATTA +
Preference number: 3 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPSYNKP*FLGQGL
Trigger: TAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp CTCAAATCACATATTCCTAATCACAACACCCCTCAGAGTGGTCAGGTATCCTCTACATCCATGTGTCCTTaGAGTAAAAGGTATACTTGT +
Preference number: 3 (lower is better)
Translates to: LKSHIPNHNTPQSGQVSSTSMCP*SKRYTC
Trigger: ACAAGTATACCTTTTACTCAAAGGACACATGGATGT...AGAGGATACCTGACCACTCTGAGGGGTGTTGTGATTAGGAATATGTGATTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGAGGCATGACTCTTTTCTaGGTTCTTATTTTCAGGTTT +
Preference number: 3 (lower is better)
Translates to: ALYNVTATLHTDVAFASGGMTLF*VLIFRF
Trigger: AAACCTGAAAATAAGAACCAAGAAAAGAGTCATGCC...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATGGCTATCATGTTCTGTaGTACATCTTGGTAGCCCTT +
Preference number: 3 (lower is better)
Translates to: VRESIKVLLALEIMLVCNGYHVL*YILVAL
Trigger: AAGGGCTACCAAGATGTACAACAGAACATGATAGCC...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR TCA 72 bp TCCGTGGCAGGTTTAGATGTTACAATTCTAACTATCTaGCAGACATTTCTGGCTAGATTCCAATGGTGGTTT +
Preference number: 3 (lower is better)
Translates to: SVAGLDVTILTI*QTFLARFQWWF
Trigger: AAACCACCATTGGAATCTAGCCAGAAATGTCTGTCAGATAGTTAGAATTGTAACATCTAAACCTGCCACGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR TCA 72 bp ACATACATACTTGTGCATGAACGGATGGGGTATTTCTaGCATCACATACAAGCAACAGTGTTCATCAGTGTT +
Preference number: 3 (lower is better)
Translates to: TYILVHERMGYF*HHIQATVFISV
Trigger: AACACTGATGAACACTGTTGCTTGTATGTGATGTCAGAAATACCCCATCCGTTCATGCACAAGTATGTATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CCA 72 bp CTACTGAGTGTTAGTGTTACAAACAGCCTTGTAAAGTaGTGTAAGCATCACAGAGGAAAGAACTCTCCTTTA +
Preference number: 3 (lower is better)
Translates to: LLSVSVTNSLVK*CKHHRGKNSPL
Trigger: TAAAGGAGAGTTCTTTCCTCTGTGATGCTTACACCACTTTACAAGGCTGTTTGTAACACTAACACTCAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CCA 72 bp TTTGATCTCCAGAAGATCAGGAGATCAGGAGCCATTTaGTTGCATATAGAAGGTACAACAAATATCAAGGCT +
Preference number: 3 (lower is better)
Translates to: FDLQKIRRSGAI*LHIEGTTNIKA
Trigger: AGCCTTGATATTTGTTGTACCTTCTATATGCAACCAAATGGCTCCTGATCTCCTGATCTTCTGGAGATCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp AGGCAACATAAACAATTACAGGAACTCTTGGTCATGAATTTTATGACACAGGTAGTCTCAGGTAGATTCTaGCAGGAGAGAGACAGATAT +
Preference number: 3 (lower is better)
Translates to: RQHKQLQELLVMNFMTQVVSGRF*QERDRY
Trigger: ATATCTGTCTCTCTCCTGCAAGAATCTACCTGAGAC...TACCTGTGTCATAAAATTCATGACCAAGAGTTCCTGTAATTGTTTATGTTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp AGTTTTTCTAGTCCAAGATCTCTCACAATTAAAGATATGCCTTTGATCTCTGAGTGTCATCACATTTCCTaGACAGTCCCGCCAACTAAA +
Preference number: 3 (lower is better)
Translates to: SFSSPRSLTIKDMPLISECHHIS*TVPPTK
Trigger: TTTAGTTGGCGGGACTGTCAAGGAAATGTGATGACA...CTCAGAGATCAAAGGCATATCTTTAATTGTGAGAGATCTTGGACTAGAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATTGGTACAATAAAGCCTaGGTTGAATTTCCAGCCCAT +
Preference number: 3 (lower is better)
Translates to: VRESIKVLLALEIMLVCNWYNKA*VEFPAH
Trigger: ATGGGCTGGAAATTCAACCAAGGCTTTATTGTACCA...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR GCA 72 bp TCTCTTCCTACTTATGTTTTCATTGAACCAAAACATTaGTGGCTAATGAGTGGCTGGTACAATAAAGCCTTG +
Preference number: 3 (lower is better)
Translates to: SLPTYVFIEPKH*WLMSGWYNKAL
Trigger: CAAGGCTTTATTGTACCAGCCACTCATTAGCCAGCAATGTTTTGGTTCAATGAAAACATAAGTAGGAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CCA 72 bp ACAGATTTATGTCTTCAATTGGAGCTATTTAGAAATTaGCCCATAGCCACCTGTACCCTAAATTTTCTCTGG +
Preference number: 3 (lower is better)
Translates to: TDLCLQLELFRN*PIATCTLNFLW
Trigger: CCAGAGAAAATTTAGGGTACAGGTGGCTATGGGCCAATTTCTAAATAGCTCCAATTGAAGACATAAATCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CCA 72 bp CTTTACTTGAAATACAAACATAGCATAGATAAGTCTTaGGGCTATGGTAGGTTTCATGCTTCATGGAAGGCA +
Preference number: 3 (lower is better)
Translates to: LYLKYKHSIDKS*GYGRFHASWKA
Trigger: TGCCTTCCATGAAGCATGAAACCTACCATAGCCCCAAGACTTATCTATGCTATGTTTGTATTTCAAGTAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CCA 72 bp CTTCCTACTTATGTTTTCATTGAACCAAAACATTGCTaGCTAATGAGTGGCTGGTACAATAAAGCCTTGGTT +
Preference number: 3 (lower is better)
Translates to: LPTYVFIEPKHC*LMSGWYNKALV
Trigger: AACCAAGGCTTTATTGTACCAGCCACTCATTAGCCAGCAATGTTTTGGTTCAATGAAAACATAAGTAGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR TCA 72 bp TGGTCAGGTATCCTCTGTTTAAATGCTAACAGAGGCTaGAAGTTTATAACTGTGATATCCACTCCACTATTA +
Preference number: 3 (lower is better)
Translates to: WSGILCLNANRG*KFITVISTPLL
Trigger: TAATAGTGGAGTGGATATCACAGTTATAAACTTTCAGCCTCTGTTAGCATTTAAACAGAGGATACCTGACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CCA 72 bp ACAGGAGGTGGTTTAATGTTGAAGCCATTAAACATGTaGTTATTCTGCTCACTTTATTTTGGAAATCCCAAG +
Preference number: 3 (lower is better)
Translates to: TGGGLMLKPLNM*LFCSLYFGNPK
Trigger: CTTGGGATTTCCAAAATAAAGTGAGCAGAATAACCACATGTTTAATGGCTTCAACATTAAACCACCTCCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CCA 72 bp GGTAAGTCAGGGAGAGCATCAAAGTTCTACTTGCATTaGAAATTATGCTTGTATGTAATTAGAGTCTCAATC +
Preference number: 3 (lower is better)
Translates to: GKSGRASKFYLH*KLCLYVIRVSI
Trigger: GATTGAGACTCTAATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGACTTACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp AGGCAACATAAACAATTACAGGAACTCTTGGTCATGAATTTTATGACACAGGTATCCATCACTGTGCATTaGCCAGCTAAATTATGTTTC +
Preference number: 3 (lower is better)
Translates to: RQHKQLQELLVMNFMTQVSITVH*PAKLCF
Trigger: GAAACATAATTTAGCTGGCAAATGCACAGTGATGGA...TACCTGTGTCATAAAATTCATGACCAAGAGTTCCTGTAATTGTTTATGTTGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR-3UTR CAA 90 bp AGGCAACATAAACAATTACAGGAACTCTTGGTCATGAATTTTATGACACAGGTATATATACATACATACTaGTGCATGAACGGATGGGGT +
Preference number: 3 (lower is better)
Translates to: RQHKQLQELLVMNFMTQVYIHTY*CMNGWG
Trigger: ACCCCATCCGTTCATGCACAAGTATGTATGTATATA...TACCTGTGTCATAAAATTCATGACCAAGAGTTCCTGTAATTGTTTATGTTGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR TCA 72 bp CAGTCTATAGTTATTAGCCTCTGTGCAACATTCCAATaGCTGTTTCCTATTTCAGTGACATATGTTGACATA +
Preference number: 3 (lower is better)
Translates to: QSIVISLCATFQ*LFPISVTYVDI
Trigger: TATGTCAACATATGTCACTGAAATAGGAAACAGTCATTGGAATGTTGCACAGAGGCTAATAACTATAGACTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR TCA 72 bp TGCTATATGAATCTGCACAGGCTGAATTCACTGCTCTaGGATTCAGTGCATTCATCTAAAATGTATTATATG +
Preference number: 3 (lower is better)
Translates to: CYMNLHRLNSLL*DSVHSSKMYYM
Trigger: CATATAATACATTTTAGATGAATGCACTGAATCTCAGAGCAGTGAATTCAGCCTGTGCAGATTCATATAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR TCA 72 bp CACCTAGACAGAAATATGACAGAAACATTAGTCTACTaGTATGGGGTTAAGTCTTGTTTCATGACACAAAGT +
Preference number: 3 (lower is better)
Translates to: HLDRNMTETLVY*YGVKSCFMTQS
Trigger: ACTTTGTGTCATGAAACAAGACTTAACCCCATATCAGTAGACTAATGTTTCTGTCATATTTCTGTCTAGGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCAGGAGCTGGGGTTCATaGCGCCCGCTCCGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVRSWGS*RPLRRP
Trigger: CGGCCGCCGGAGCGGGCGCCATGAACCCCAGCTCCT...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCTCGTCCTTCTCCTTCTaGCCGGCGGCCGCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVSSFSF*PAAAGS
Trigger: CGAGCCCGCGGCCGCCGGCCAGAAGGAGAAGGACGA...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCAGGTCCGCGCGCCGCTaGCAGGGGCAGCAAATGGCA +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVRSARR*QGQQMA
Trigger: TGCCATTTGCTGCCCCTGCCAGCGGCGCGCGGACCT...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR TCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCCCAGCAGCCTGGGCTaGCCCCTGGGTTACCTCTCT +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVPSSLG*PLGYLS
Trigger: AGAGAGGTAACCCAGGGGTCAGCCCAGGCTGCTGGG...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGCCGGAGGCGACGGGCTaGGGCGGAGGGGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLPEATG*GGGGER
Trigger: TCTCTCTCCCCCTCCGCCGCAGCCCGTCGCCTCCGG...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424189.6
ENST00000446122.5
CDS-3UTR GCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCGCATCCATCCGCGGCTaGACCGCACCGGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVASIRG*TAPGHC
Trigger: ACAATGCCCCGGTGCGGTGCAGCCGCGGATGGATGC...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR TCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCTGTCCCCGCCGGCTGTaGCACCACCATATCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVCPRRL*HHHIWV
Trigger: GACCCAGATATGGTGGTGTCACAGCCGGCGGGGACA...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCCATGGCCCCCAACTTaGAGGGCTGCCAAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVPWPPT*RAAKEA
Trigger: GGCCTCTTTGGCAGCCCTGCAAGTTGGGGGCCATGG...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCCCACCAGGTCAGGCATaGCCGGAGGTGTCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: SLVVATLVAEAKEFSMIAPPGQA*PEVSPP
Trigger: CGGCGGGGACACCTCCGGGCATGCCTGACCTGGTGG...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCGCTGAACATGAACTCTaGCCGGAGGCGACGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSAEHEL*PEATGC
Trigger: GCAGCCCGTCGCCTCCGGGCAGAGTTCATGTTCAGC...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424189.6
ENST00000446122.5
CDS-3UTR CCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGTCGTCCTTCTCCTTCTaGCCGGCGGCCGCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLSSFSF*PAAAGS
Trigger: CGAGCCCGCGGCCGCCGGCCAGAAGGAGAAGGACGA...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCGCAGGAGCCAGATGCTaGAGGCCTGCCCGGGAGATT +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSAGARC*RPAREI
Trigger: AATCTCCCGGGCAGGCCTCCAGCATCTGGCTCCTGC...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCACAGCCCGGTTCCGCTaGCAGGCAGCCTTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVTARFR*QAALCS
Trigger: ACTGCACAAGGCTGCCTGCCAGCGGAACCGGGCTGT...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCGCATCCACCAGAAGCTaGCACACAGCCCGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSASTRS*HTARFR
Trigger: GCGGAACCGGGCTGTGTGCCAGCTTCTGGTGGATGC...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGAGGTCCGCGCGCCGCTaGCAGGGGCAGCAAATGGCA +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLRSARR*QGQQMA
Trigger: TGCCATTTGCTGCCCCTGCCAGCGGCGCGCGGACCT...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCGTAAGCAGCCAAGTCTaGGTCCCCAGCCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVVSSQV*VPSLLC
Trigger: GCACAGCAGGCTGGGGACCCAGACTTGGCTGCTTAC...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCCATGCTGGACACCCTaGGGTTCTCCTGCACTGCAC +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVPCWTP*GSPALH
Trigger: GTGCAGTGCAGGAGAACCCCAGGGTGTCCAGCATGG...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCGCCTGCCCGGGAGATTaGTTTCCTGTACGAGACCTG +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSACPGD*FPVRDL
Trigger: CAGGTCTCGTACAGGAAAGCAATCTCCCGGGCAGGC...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCCAGATGCTGGAGGCCTaGCCGGGAGATTGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSQMLEA*PGDCFP
Trigger: AGGAAAGCAATCTCCCGGGCAGGCCTCCAGCATCTG...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCTGTGCAGGAGCCAGATaGTGGAGGCCTGCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: SLVVATLVAEAKEFSMIACAGAR*WRPARE
Trigger: CTCCCGGGCAGGCCTCCAGCATCTGGCTCCTGCACA...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614521.2
CDS-3UTR GCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCAAGGCTGAGGGGATGTaGAGGAGCCAGATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSKAEGM*RSQMLE
Trigger: CTCCAGCATCTGGCTCCTGCACATCCCCTCAGCCTT...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCTTCTTCCAGGGGAGCTaGCCAATTGCAGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVFFQGS*PIAGRA
Trigger: TGCCCTCCCTGCAATTGGGCAGCTCCCCTGGAAGAA...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGGCATCCATCCGCGGCTaGACCGCACCGGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLASIRG*TAPGHC
Trigger: ACAATGCCCCGGTGCGGTGCAGCCGCGGATGGATGC...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCTCGCTCTGGGCTCCTTaGCTGGACCATTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVSLWAP*LDHLPQ
Trigger: CTGTGGCAAATGGTCCAGCCAAGGAGCCCAGAGCGA...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCTGTAGCCTCTCTCCATaGCCCCCAACTTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVCSLSP*PPTCRA
Trigger: AGCCCTGCAAGTTGGGGGCCATGGAGAGAGGCTACA...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCGCACGCGGGAGTGGCTaGGATCTTTCAGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVARGSG*DLSDLS
Trigger: ACTCAGATCTGAAAGATCTCAGCCACTCCCGCGTGC...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR TCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCGCACGCGGGAGTGGCTaGGATCTTTCAGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSARGSG*DLSDLS
Trigger: ACTCAGATCTGAAAGATCTCAGCCACTCCCGCGTGC...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR TCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCTGCGTAGTGAAGGAGTaGACAGTGGTCTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVCVVKE*TVVWSL
Trigger: CAGGGACCAGACCACTGTTCACTCCTTCACTACGCA...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTCCCAGCAGCCTGGGCTaGCCCCTGGGTTACCTCTCT +
Preference number: 4 (lower is better)
Translates to: KAKMATHRQYGAVQTAQAPSSLG*PLGYLS
Trigger: AGAGAGGTAACCCAGGGGTCAGCCCAGGCTGCTGGG...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGCCATGGCCCCCAACTTaGAGGGCTGCCAAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLPWPPT*RAAKEA
Trigger: GGCCTCTTTGGCAGCCCTGCAAGTTGGGGGCCATGG...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCCCACCAGGTCAGGCATaGCCGGAGGTGTCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCPPGQA*PEVSPP
Trigger: CGGCGGGGACACCTCCGGGCATGCCTGACCTGGTGG...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCCACTGTCACTCAGCATaGGTTTCCGCAGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSHCHSA*VSAGQD
Trigger: ATCCTGCCCTGCGGAAACGCATGCTGAGTGACAGTG...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCGGCAGCCTTGTGCAGTaGAGTCTCACCCGTTTCACT +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVGSLVQ*SLTRFT
Trigger: AGTGAAACGGGTGAGACTGCACTGCACAAGGCTGCC...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGGCAGGAGCCAGATGCTaGAGGCCTGCCCGGGAGATT +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLAGARC*RPAREI
Trigger: AATCTCCCGGGCAGGCCTCCAGCATCTGGCTCCTGC...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCGATCCGAATCATAGCTaGGGCCAACCTACAGGGCTC +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSDPNHS*GQPTGL
Trigger: GAGCCCTGTAGGTTGGCCCCAGCTATGATTCGGATC...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCTACAGCCCAGCAGCCTaGGCTGACCCCTGGGTTACC +
Preference number: 4 (lower is better)
Translates to: SLVVATLVAEAKEFSMIAYSPAA*ADPWVT
Trigger: GGTAACCCAGGGGTCAGCCCAGGCTGCTGGGCTGTA...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCGGTACCCTGGATGCCTaGGAACGTTTTCCCACTCAG +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVGTLDA*ERFPTQ
Trigger: CTGAGTGGGAAAACGTTCCCAGGCATCCAGGGTACC...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCAGCCAAGGGTACCCTaGATGCCTGGGAACGTTTTC +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVQPRVP*MPGNVF
Trigger: GAAAACGTTCCCAGGCATCCAGGGTACCCTTGGCTG...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCCAGCCAAGGGTACCCTaGATGCCTGGGAACGTTTTC +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSQPRVP*MPGNVF
Trigger: GAAAACGTTCCCAGGCATCCAGGGTACCCTTGGCTG...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCGGTTCGAAATCATGGTaGTCACCTGGGTTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVGSKSW*SPGFPQ
Trigger: CTGGGGAAACCCAGGTGATCACCATGATTTCGAACC...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCCACAGACATCTCCCATaGCACCTCACCATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSHRHLP*HLTIPQ
Trigger: CTGAGGAATGGTGAGGTGGCATGGGAGATGTCTGTG...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCAGGTCCGCGCGCCGCTaGCAGGGGCAGCAAATGGCA +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCRSARR*QGQQMA
Trigger: TGCCATTTGCTGCCCCTGCCAGCGGCGCGCGGACCT...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCAGGACTTTGGTTCCCTaGTTGCCTCCACTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVRTLVP*LPPLLG
Trigger: TCCCAAGAGTGGAGGCAACCAGGGAACCAAAGTCCT...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCAGGACTTTGGTTCCCTaGTTGCCTCCACTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSRTLVP*LPPLLG
Trigger: TCCCAAGAGTGGAGGCAACCAGGGAACCAAAGTCCT...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCACATCTGCAGGACTTTaGTTCCCTGGTTGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSTSAGL*FPGCLH
Trigger: GTGGAGGCAACCAGGGAACCAAAGTCCTGCAGATGT...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGGTAGGACCTCCCTTGTaGTTGCCACGCTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLVGPPL*LPRWWQ
Trigger: CTGCCACCAGCGTGGCAACCACAAGGGAGGTCCTAC...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCCAGGGTTCTTCAATGTaGTGCAGCATGAAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSQGSSM*CSMKQV
Trigger: GACCTGCTTCATGCTGCATCACATTGAAGAACCCTG...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCTGCTGTGCTCTTTCTTaGGGTGTCTTACCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVCCALS*GVLPLE
Trigger: CTCCAAGGGTAAGACACCTCAAGAAAGAGCACAGCA...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCACCCCCATACTACACTaGAGTTACACCTTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVTPILH*SYTFPE
Trigger: TTCCGGGAAGGTGTAACTTCAGTGTAGTATGGGGGT...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCTTCCGCTGCTGCTGCTaGCGCCCGTCGCCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCFRCCC*RPSPLS
Trigger: AGAAAGGGGCGACGGGCGGCAGCAGCAGCAGCGGAA...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGCAGATGCTGGAGGCCTaGCCGGGAGATTGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLQMLEA*PGDCFP
Trigger: AGGAAAGCAATCTCCCGGGCAGGCCTCCAGCATCTG...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCTGTGCAGGAGCCAGATaGTGGAGGCCTGCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCCAGAR*WRPARE
Trigger: CTCCCGGGCAGGCCTCCAGCATCTGGCTCCTGCACA...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGTTACATTTCCCCTCCTaGCGACGCCTGTGCACCCAG +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLLHFPS*RRLCTQ
Trigger: CTGGGTGCACAGGCGTCGGCAGGAGGGGAAATGTAA...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCCTTTGGTTCCCTGGTTaGCTCCACTCTTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSLWFPG*LHSWDS
Trigger: TGAATCCCAAGAGTGGAGGCAACCAGGGAACCAAAG...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCTTCCCCAGGGCATTGTaGCAGCACAATATCTGGGTA +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVFPRAL*QHNIWV
Trigger: TACCCAGATATTGTGCTGGCACAATGCCCTGGGGAA...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCGTCTTTCTCAGAGATaGTCCTGCATCCACCAGAAG +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVRLSQR*SCIHQK
Trigger: CTTCTGGTGGATGCAGGAGCATCTCTGAGAAAGACG...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGACCTCCCTTGTGGTTaGCACGCTGGTGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: KAKMATHRQYGAVQTAQADLPCG*HAGGRS
Trigger: GCTTCTGCCACCAGCGTGGCAACCACAAGGGAGGTC...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGAGGAGCTGGGGTTCATaGCGCCCGCTCCGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQRSWGS*RPLRRP
Trigger: CGGCCGCCGGAGCGGGCGCCATGAACCCCAGCTCCT...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCCTCCCGCCGAGGAGCTaGGGTTCATGGCGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSLPPRS*GSWRPL
Trigger: GAGCGGGCGCCATGAACCCCAGCTCCTCGGCGGGAG...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGTCGCTCTGGGCTCCTTaGCTGGACCATTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLSLWAP*LDHLPQ
Trigger: CTGTGGCAAATGGTCCAGCCAAGGAGCCCAGAGCGA...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCGGGTTTCTTTCCACATaGAGGTTCCAGCGATCTAGC +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSGFLST*RFQRSS
Trigger: GCTAGATCGCTGGAACCTCCATGTGGAAAGAAACCC...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGAATGAAACGGAGGGTTaGCGGGTGAGGGGGACATGC +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLNETEG*RVRGTC
Trigger: GCATGTCCCCCTCACCCGCCAACCCTCCGTTTCATT...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCCTTCTTCTTCCGATTTaGAGCCTTCAGGGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSLLLPI*SLQGVL
Trigger: CAGAACTCCCTGAAGGCTTCAAATCGGAAGAAGAAG...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCGATTCAGGTACCACATaGACATCTGCAGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVDSGTT*TSAGLW
Trigger: CCAAAGTCCTGCAGATGTTCATGTGGTACCTGAATC...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCGATTCAGGTACCACATaGACATCTGCAGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSDSGTT*TSAGLW
Trigger: CCAAAGTCCTGCAGATGTTCATGTGGTACCTGAATC...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCCATGGAACTCCAGTGTaGCATGGGCATCAAATCCAA +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSHGTPV*HGHQIQ
Trigger: TTGGATTTGATGCCCATGTCACACTGGAGTTCCATG...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCCAGTGGTCTGGTCCCTaGATTAGCAGACTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SLVVATLVAEAKEFSMIAQWSGP*ISRLPP
Trigger: TGGAGGCAGTCTGCTAATTCAGGGACCAGACCACTG...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCGTTGAAGCATCCTTCTaGATGATCCAGGCATCCCAT +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSVEASF*MIQASH
Trigger: ATGGGATGCCTGGATCATTCAGAAGGATGCTTCAAC...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCGACGATTTTACAGACTaGACACTTCCTCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSDDFTD*TLPPES
Trigger: GCTCTCAGGAGGAAGTGTGCAGTCTGTAAAATCGTC...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCTACCACATGAACATCTaGAGGACTTTGGTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVYHMNI*RTLVPW
Trigger: CCAGGGAACCAAAGTCCTGCAGATGTTCATGTGGTA...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCCCATGGCCCCCAACTTaGAGGGCTGCCAAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCPWPPT*RAAKEA
Trigger: GGCCTCTTTGGCAGCCCTGCAAGTTGGGGGCCATGG...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCATCGCTCCAAATGACTaGACTAGTTCCCCAGCAATG +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSIAPND*TSSPAM
Trigger: CATTGCTGGGGAACTAGTGCAGTCATTTGGAGCGAT...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288490.9
ENST00000453654.6
CDS-3UTR GCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCATCGCTCCAAATGACTaGACTAGTTCCCCAGCAATG +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVIAPND*TSSPAM
Trigger: CATTGCTGGGGAACTAGTGCAGTCATTTGGAGCGAT...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288490.9
ENST00000453654.6
CDS-3UTR GCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGGGCAGCCTTGTGCAGTaGAGTCTCACCCGTTTCACT +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLGSLVQ*SLTRFT
Trigger: AGTGAAACGGGTGAGACTGCACTGCACAAGGCTGCC...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTTGGCAGGCAGCCTTGTaGAGTGCAGTCTCACCCGTT +
Preference number: 4 (lower is better)
Translates to: KAKMATHRQYGAVQTAQAWQAAL*SAVSPV
Trigger: AACGGGTGAGACTGCACTGCACAAGGCTGCCTGCCA...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCTGCTCATGTCCTCTTTaGCCGAATACCAGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVCSCPL*PNTRVK
Trigger: TTTGACCCTGGTATTCGGGCAAAGAGGACATGAGCA...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCAATCTCCAGGTATCCTaGCTCCTTCTCAATGGGCTA +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVNLQVS*LLLNGL
Trigger: TAGCCCATTGAGAAGGAGGCAGGATACCTGGAGATT...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCAATCTCCAGGTATCCTaGCTCCTTCTCAATGGGCTA +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSNLQVS*LLLNGL
Trigger: TAGCCCATTGAGAAGGAGGCAGGATACCTGGAGATT...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGCTCCCGCCGAGGAGCTaGGGTTCATGGCGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQLPPRS*GSWRPL
Trigger: GAGCGGGCGCCATGAACCCCAGCTCCTCGGCGGGAG...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGTCGTCCTTCTCCTTCTaGCCGGCGGCCGCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQSSFSF*PAAAGS
Trigger: CGAGCCCGCGGCCGCCGGCCAGAAGGAGAAGGACGA...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCAACTCCAGTGTGACATaGGCATCAAATCCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVNSSVT*ASNPRL
Trigger: CAGCCTTGGATTTGATGCCCATGTCACACTGGAGTT...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCGCTTCTCTGGATTCATaGAACTCCAGTGTGACATGG +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVASLDS*NSSVTW
Trigger: CCATGTCACACTGGAGTTCCATGAATCCAGAGAAGC...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTTGTAGCCTCTCTCCATaGCCCCCAACTTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KAKMATHRQYGAVQTAQACSLSP*PPTCRA
Trigger: AGCCCTGCAAGTTGGGGGCCATGGAGAGAGGCTACA...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCTCTTCTGTACCATGTTaGCCTGATTCCTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVSSVPC*PDSSGR
Trigger: TCTCCCTGAGGAATCAGGCCAACATGGTACAGAAGA...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCAGTCCTGCATGGCTATTaGCTACAGCCCAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: KMATHRQYGAVQTAQAEPVLHGY*LQPSSL
Trigger: CAGGCTGCTGGGCTGTAGCCAATAGCCATGCAGGAC...TGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCAACACCCCTCAGAGTaGTCAGGTATCCTCTGTTTA +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVQHPSE*SGILCL
Trigger: TAAACAGAGGATACCTGACCACTCTGAGGGGTGTTG...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCCAACCAATGATGGGTaGGGAGAGTGGCGAATAAAA +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVPTNDG*GEWRIK
Trigger: TTTTATTCGCCACTCTCCCCACCCATCATTGGTTGG...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGCAGGTCACCTTATTGTaGAACGCCTGCTTGCACCAG +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLQVTLL*NACLHQ
Trigger: CTGGTGCAAGCAGGCGTTTCACAATAAGGTGACCTG...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCAGCCCCCTCCCCAGTTaGGAGTTCGAGCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCSPLPS*EFEPGH
Trigger: ATGACCTGGCTCGAACTCTCAACTGGGGAGGGGGCT...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGTGTACCATGTTGGCCTaGTTCCTCAGGGAGATCCGA +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLCTMLA*FLREIR
Trigger: TCGGATCTCCCTGAGGAATCAGGCCAACATGGTACA...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTTGCGTAGTGAAGGAGTaGACAGTGGTCTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: KAKMATHRQYGAVQTAQACVVKE*TVVWSL
Trigger: CAGGGACCAGACCACTGTTCACTCCTTCACTACGCA...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCACCTGGGTTACCTCTCTaGGGTACCTCCAAGCACAGA +
Preference number: 4 (lower is better)
Translates to: KMATHRQYGAVQTAQAEPPGLPL*GTSKHR
Trigger: TCTGTGCTTGGAGGTACCTCAGAGAGGTAACCCAGG...TGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCGTTATATCCTTAGTATaGTGCCTGCCTCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSVISLV*CLPQSD
Trigger: GTCACTCTGAGGCAGGCATCATACTAAGGATATAAC...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCAGTTCTTCTATTAGCTaGCCCTACTTCCCCCAAGTT +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVSSSIS*PYFPQV
Trigger: AACTTGGGGGAAGTAGGGTCAGCTAATAGAAGAACT...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCTTCCGCTGCTGCTGCTaGCGCCCGTCGCCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSFRCCC*RPSPLS
Trigger: AGAAAGGGGCGACGGGCGGCAGCAGCAGCAGCGGAA...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGAAAGGCTGAGGGGATGTaGAGGAGCCAGATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLRKAEGM*RSQMLE
Trigger: CTCCAGCATCTGGCTCCTGCACATCCCCTCAGCCTT...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614521.2
CDS-3UTR GCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTTAATCTTTTCTAGCTaGTCAATGCAGGCGGTGTGG +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSLIFSS*SMQAVW
Trigger: CCACACCGCCTGCATTGAGCAGCTAGAAAAGATTAA...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCGAAAGATCAAAGACTTaGCGTGGATTCAGGTACCAC +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVERSKT*RGFRYH
Trigger: GTGGTACCTGAATCCACGGCAAGTCTTTGATCTTTC...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGCCCAACTTGCAGGGCTaGCAAAGAGGCCATGGTAAA +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLPNLQG*QRGHGK
Trigger: TTTACCATGGCCTCTTTGGCAGCCCTGCAAGTTGGG...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCTGGATGTTCTCCTCTTaGTCTTCTGTACCATGTTGG +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVWMFSS*SSVPCW
Trigger: CCAACATGGTACAGAAGAGCAAGAGGAGAACATCCA...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGCCACCAGGTCAGGCATaGCCGGAGGTGTCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWPPGQA*PEVSPP
Trigger: CGGCGGGGACACCTCCGGGCATGCCTGACCTGGTGG...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTCACTGTCACTCAGCATaGGTTTCCGCAGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: KAKMATHRQYGAVQTAQAHCHSA*VSAGQD
Trigger: ATCCTGCCCTGCGGAAACGCATGCTGAGTGACAGTG...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614521.2
CDS-3UTR GCA 90 bp GTCAGCCAAGCTAGCTGCCTCTTCAGTGCTGTCTCAGTAGGCTTTGTAGAAATGTGGCAGGCAGCCTTGTaGAGTGCAGTCTCACCCGTT +
Preference number: 4 (lower is better)
Translates to: VSQASCLFSAVSVGFVEMWQAAL*SAVSPV
Trigger: AACGGGTGAGACTGCACTGCACAAGGCTGCCTGCCA...CATTTCTACAAAGCCTACTGAGACAGCACTGAAGAGGCAGCTAGCTTGGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGGTCCCCAGCCTGCTGTaGTCTTTCTTGAGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLVPSLL*SFLRCL
Trigger: AAGACACCTCAAGAAAGAGCACAGCAGGCTGGGGAC...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCACCGGAGGCGACGGGCTaGGGCGGAGGGGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPPEATG*GGGGER
Trigger: TCTCTCTCCCCCTCCGCCGCAGCCCGTCGCCTCCGG...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424189.6
ENST00000446122.5
CDS-3UTR CCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGCTCCCGCCGAGGAGCTaGGGTTCATGGCGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKLPPRS*GSWRPL
Trigger: GAGCGGGCGCCATGAACCCCAGCTCCTCGGCGGGAG...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCCTCCCGCCGAGGAGCTaGGGTTCATGGCGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVLPPRS*GSWRPL
Trigger: GAGCGGGCGCCATGAACCCCAGCTCCTCGGCGGGAG...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614521.2
CDS-3UTR CCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGAGGACTTTGGTTCCCTaGTTGCCTCCACTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLRTLVP*LPPLLG
Trigger: TCCCAAGAGTGGAGGCAACCAGGGAACCAAAGTCCT...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCATCTTCAAGTTCTTCTaGAGGCAAGTCGGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVIFKFF*RQVGVS
Trigger: AGAAACCCCGACTTGCCTCCAGAAGAACTTGAAGAT...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCGTAAGCAGCCAAGTCTaGGTCCCCAGCCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCVSSQV*VPSLLC
Trigger: GCACAGCAGGCTGGGGACCCAGACTTGGCTGCTTAC...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCCTGCCTCCTTCTCAATaGGCTATCATGTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSLPPSQ*AIMFCC
Trigger: ACAACAGAACATGATAGCCCATTGAGAAGGAGGCAG...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCGATGATCAAGGTCAGTaGACATCCATGTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVDDQGQ*TSMCPL
Trigger: CAAAGGACACATGGATGTCCACTGACCTTGATCATC...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTGTAAGTTAGAAGCATaGCTTCTCGACACTGGTGTA +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSCKLEA*LLDTGV
Trigger: TACACCAGTGTCGAGAAGTCATGCTTCTAACTTACA...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCTGTCCCCGCCGGCTGTaGCACCACCATATCTGGGTC +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSCPRRL*HHHIWV
Trigger: GACCCAGATATGGTGGTGTCACAGCCGGCGGGGACA...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CTCAAATCACATATTCCTAATCACAACACCCCTCAGAGTGGTCAGGTATCCTCTTGTCCCCGCCGGCTGTaGCACCACCATATCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LKSHIPNHNTPQSGQVSSCPRRL*HHHIWV
Trigger: GACCCAGATATGGTGGTGTCACAGCCGGCGGGGACA...AGAGGATACCTGACCACTCTGAGGGGTGTTGTGATTAGGAATATGTGATTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGGTCCTCATGGCCAATaGCCTTATAGTTCTGACGGC +
Preference number: 4 (lower is better)
Translates to: KAKMATHRQYGAVQTAQAGPHGQ*PYSSDG
Trigger: GCCGTCAGAACTATAAGGTCATTGGCCATGAGGACC...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGATCTCAATCCAACCAATaGTGGGTGGGGAGAGTGGCG +
Preference number: 4 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLRSQSNQ*WVGRVA
Trigger: CGCCACTCTCCCCACCCATCATTGGTTGGATTGAGA...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCGCCTGCCCGGGAGATTaGTTTCCTGTACGAGACCTG +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCACPGD*FPVRDL
Trigger: CAGGTCTCGTACAGGAAAGCAATCTCCCGGGCAGGC...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGTGTGCAGGAGCCAGATaGTGGAGGCCTGCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQCAGAR*WRPARE
Trigger: CTCCCGGGCAGGCCTCCAGCATCTGGCTCCTGCACA...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCCTTGGCTGGACCATTTaGCACAGGAAGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCLGWTI*HRKAEG
Trigger: CCCCTCAGCCTTCCTGTGGCAAATGGTCCAGCCAAG...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCTTACATTTCCCCTCCTaGCGACGCCTGTGCACCCAG +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCLHFPS*RRLCTQ
Trigger: CTGGGTGCACAGGCGTCGGCAGGAGGGGAAATGTAA...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGAAGCCCTTACCACACTaGTTACATTTCCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLKPLPH*LHFPSC
Trigger: GCAGGAGGGGAAATGTAAGCAGTGTGGTAAGGGCTT...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGCCACCAGGTCAGGCATaGCCGGAGGTGTCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVPPGQA*PEVSPP
Trigger: CGGCGGGGACACCTCCGGGCATGCCTGACCTGGTGG...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGCGTCTTTCTCAGAGATaGTCCTGCATCCACCAGAAG +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLRLSQR*SCIHQK
Trigger: CTTCTGGTGGATGCAGGAGCATCTCTGAGAAAGACG...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGTCCCCAGCCTGCTGTaGTCTTTCTTGAGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: KAKMATHRQYGAVQTAQAVPSLL*SFLRCL
Trigger: AAGACACCTCAAGAAAGAGCACAGCAGGCTGGGGAC...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGCATCCATCCGCGGCTaGACCGCACCGGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQASIRG*TAPGHC
Trigger: ACAATGCCCCGGTGCGGTGCAGCCGCGGATGGATGC...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCCTGGAAACAATCTGCTaGAGTGTCTCCTGTAATATC +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSLETIC*SVSCNI
Trigger: GATATTACAGGAGACACTGCAGCAGATTGTTTCCAG...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCATTGAACCAAAACATTaGTGGCTAATGAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVIEPKH*WLMSGW
Trigger: CCAGCCACTCATTAGCCAGCAATGTTTTGGTTCAAT...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGAGCCAGCTGGCAGCTTTaGAAAAGCATGGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLRASWQL*KSMALG
Trigger: TCCCAGAGCCATGCTTTTGCAAAGCTGCCAGCTGGC...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCATCGTCCTTCTCCTTCTaGCCGGCGGCCGCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPSSFSF*PAAAGS
Trigger: CGAGCCCGCGGCCGCCGGCCAGAAGGAGAAGGACGA...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGGGGTTTCTTTCCACATaGAGGTTCCAGCGATCTAGC +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLGFLST*RFQRSS
Trigger: GCTAGATCGCTGGAACCTCCATGTGGAAAGAAACCC...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGATGACTTCTCGACACTaGTGTAGCCTCTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLMTSRH*CSLSPW
Trigger: CCATGGAGAGAGGCTACACCAGTGTCGAGAAGTCAT...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCCCACTTGCATGGGGATaGATTTGTAAGTTAGAAGCA +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSPLAWG*ICKLEA
Trigger: TGCTTCTAACTTACAAATCCATCCCCATGCAAGTGG...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGCGATCTGGGACAGACTaGGGATCATTGAGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLRSGTD*GSLSKG
Trigger: GCCTTTACTCAATGATCCCCAGTCTGTCCCAGATCG...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCAACTCGGAAGGTCCGTaGTCAAGGATATATTTCACA +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVNSEGP*SRIYFT
Trigger: TGTGAAATATATCCTTGACCACGGACCTTCCGAGTT...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCACAGCCCGGTTCCGCTaGCAGGCAGCCTTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSTARFR*QAALCS
Trigger: ACTGCACAAGGCTGCCTGCCAGCGGAACCGGGCTGT...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGTGCATAGGGGGAGGATaGAGCAGTGCCATTTATACG +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLCIGGG*SSAIYT
Trigger: CGTATAAATGGCACTGCTCCATCCTCCCCCTATGCA...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCTTGACATTATCCATGTaGCACTTCCCAGCTCCTATA +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVLTLSM*HFPAPI
Trigger: TATAGGAGCTGGGAAGTGCCACATGGATAATGTCAA...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTTGACATTATCCATGTaGCACTTCCCAGCTCCTATA +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSLTLSM*HFPAPI
Trigger: TATAGGAGCTGGGAAGTGCCACATGGATAATGTCAA...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCTCTGACAGACATTTCTaGCTAGATTCCAATGGTGGT +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVSDRHF*LDSNGG
Trigger: ACCACCATTGGAATCTAGCCAGAAATGTCTGTCAGA...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTTGTAGCCTTTGCGAGTaGAATACCCACAGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: KAKMATHRQYGAVQTAQACSLCE*NTHSQG
Trigger: CCCTTGGCTGTGGGTATTCCACTCGCAAAGGCTACA...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGCATGGAACTCCAGTGTaGCATGGGCATCAAATCCAA +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLHGTPV*HGHQIQ
Trigger: TTGGATTTGATGCCCATGTCACACTGGAGTTCCATG...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCCAGTGGTCTGGTCCCTaGATTAGCAGACTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCQWSGP*ISRLPP
Trigger: TGGAGGCAGTCTGCTAATTCAGGGACCAGACCACTG...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCCCTGGGTTACCTCTCTaGGGTACCTCCAAGCACAGA +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCPGLPL*GTSKHR
Trigger: TCTGTGCTTGGAGGTACCTCAGAGAGGTAACCCAGG...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCCATCCATGTGTCCTTTaGGTAAAAGGTATACTTGTC +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSHPCVL*VKGILV
Trigger: GACAAGTATACCTTTTACTCAAAGGACACATGGATG...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTTTCACTTTGACTCCTaGATCTGTGACCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSFHFDS*ICDLFA
Trigger: AGCAAAAAGGTCACAGATTCAGGAGTCAAAGTGAAA...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCAAGCCCTTTATAATGTaGCTGCAACTCTTCATACAG +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVKPFIM*LQLFIQ
Trigger: CTGTATGAAGAGTTGCAGTCACATTATAAAGGGCTT...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GTCAGCCAAGCTAGCTGCCTCTTCAGTGCTGTCTCAGTAGGCTTTGTAGAAATGTTTCTAGCTGCTCAATaGAGGCGGTGTGGACGACGA +
Preference number: 4 (lower is better)
Translates to: VSQASCLFSAVSVGFVEMFLAAQ*RRCGRR
Trigger: TCGTCGTCCACACCGCCTGCATTGAGCAGCTAGAAA...CATTTCTACAAAGCCTACTGAGACAGCACTGAAGAGGCAGCTAGCTTGGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCACCATGGCCCCCAACTTaGAGGGCTGCCAAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPPWPPT*RAAKEA
Trigger: GGCCTCTTTGGCAGCCCTGCAAGTTGGGGGCCATGG...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGCCATGGCCCCCAACTTaGAGGGCTGCCAAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQPWPPT*RAAKEA
Trigger: GGCCTCTTTGGCAGCCCTGCAAGTTGGGGGCCATGG...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCATCACCAGCTATTACTaGCTGCAAAATTGCATGATC +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVITSYY*LQNCMI
Trigger: GATCATGCAATTTTGCAGGCAGTAATAGCTGGTGAT...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGAATCTCCAGGTATCCTaGCTCCTTCTCAATGGGCTA +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLNLQVS*LLLNGL
Trigger: TAGCCCATTGAGAAGGAGGCAGGATACCTGGAGATT...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCGAACACAGAAGTTCATaGTACTTGCTGGAAGCAATA +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSEHRSS*YLLEAI
Trigger: TATTGCTTCCAGCAAGTAGCATGAACTTCTGTGTTC...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGGGGAGGATGGAGCAGTaGCATTTATACGAACATCCT +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLGRMEQ*HLYEHP
Trigger: AGGATGTTCGTATAAATGGCACTGCTCCATCCTCCC...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGCTGAACATGAACTCTaGCCGGAGGCGACGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQAEHEL*PEATGC
Trigger: GCAGCCCGTCGCCTCCGGGCAGAGTTCATGTTCAGC...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424189.6
ENST00000446122.5
CDS-3UTR CCA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGGCAGGAGCCAGATGCTaGAGGCCTGCCCGGGAGATT +
Preference number: 4 (lower is better)
Translates to: QVCTALHQSLLISITVHLAGARC*RPAREI
Trigger: AATCTCCCGGGCAGGCCTCCAGCATCTGGCTCCTGC...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614521.2
CDS-3UTR CCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGTCAATGCAGGCGGTGTaGACGACGATTTTACAGACT +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLSMQAV*TTILQT
Trigger: AGTCTGTAAAATCGTCGTCCACACCGCCTGCATTGA...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCAATCATGGTGATCACCTaGGTTTCCCCAGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: KMATHRQYGAVQTAQAEPIMVIT*VSPGHC
Trigger: ACAATGCCCTGGGGAAACCCAGGTGATCACCATGAT...TGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCACGATCTGGGACAGACTaGGGATCATTGAGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: KMATHRQYGAVQTAQAEPRSGTD*GSLSKG
Trigger: GCCTTTACTCAATGATCCCCAGTCTGTCCCAGATCG...TGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGATCCTCAGACGATCTaGGACAGACTGGGGATCATT +
Preference number: 4 (lower is better)
Translates to: KAKMATHRQYGAVQTAQADPQTI*DRLGII
Trigger: AATGATCCCCAGTCTGTCCCAGATCGTCTGAGGATC...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGACAGCCCGGTTCCGCTaGCAGGCAGCCTTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: QVCTALHQSLLISITVHLTARFR*QAALCS
Trigger: ACTGCACAAGGCTGCCTGCCAGCGGAACCGGGCTGT...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAGGTGTCTTACCCTTaGAGTCCGTCTTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: KAKMATHRQYGAVQTAQAEVSYP*SPSFSE
Trigger: CTCTGAGAAAGACGGACTCCAAGGGTAAGACACCTC...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGAGTAAGCAGCCAAGTCTaGGTCCCCAGCCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: ALYNVTATLHTDVAFASGVSSQV*VPSLLC
Trigger: GCACAGCAGGCTGGGGACCCAGACTTGGCTGCTTAC...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGCGCACCGGGGCATTGTaGGAAACTCCGCTCACTCCC +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQRTGAL*ETPLTP
Trigger: GGGAGTGAGCGGAGTTTCCCACAATGCCCCGGTGCG...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGAGCCTGGGCTGACCCCTaGGTTACCTCTCTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: ALYNVTATLHTDVAFASGAWADP*VTSLRY
Trigger: GTACCTCAGAGAGGTAACCCAGGGGTCAGCCCAGGC...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCAGCATAGATAAGTCTTaGGGCTATGGTAGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVSIDKS*GYGRFH
Trigger: ATGAAACCTACCATAGCCCCAAGACTTATCTATGCT...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGCAACACCCCTCAGAGTaGTCAGGTATCCTCTGTTTA +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLQHPSE*SGILCL
Trigger: TAAACAGAGGATACCTGACCACTCTGAGGGGTGTTG...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCAGCTTTGCAAAAGCATaGCTCTGGGATGTGATAGGG +
Preference number: 4 (lower is better)
Translates to: SLVVATLVAEAKEFSMIASFAKA*LWDVIG
Trigger: CCCTATCACATCCCAGAGCCATGCTTTTGCAAAGCT...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTATTCCACCTGCCAGCTaGCAGCTTTGCAAAAGCATG +
Preference number: 4 (lower is better)
Translates to: KAKMATHRQYGAVQTAQAIPPAS*QLCKSM
Trigger: CATGCTTTTGCAAAGCTGCCAGCTGGCAGGTGGAAT...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CAA 72 bp TCCTCCAGGTGCCGTCAAAGAGGCATGTGGCTTACATaGTTGAATGAGGAAGCAGCAGCCGTGATTGTGTAC +
Preference number: 4 (lower is better)
Translates to: SSRCRQRGMWLT*LNEEAAAVIVY
Trigger: GTACACAATCACGGCTGCTGCTTCCTCATTCAACAATGTAAGCCACATGCCTCTTTGACGGCACCTGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CAA 72 bp CATTGCTGGCTAATGAGTGGCTGGTACAATAAAGCCTaGGTTGAATTTCCAGCCCATGCTGGACACCCTGGG +
Preference number: 4 (lower is better)
Translates to: HCWLMSGWYNKA*VEFPAHAGHPG
Trigger: CCCAGGGTGTCCAGCATGGGCTGGAAATTCAACCAAGGCTTTATTGTACCAGCCACTCATTAGCCAGCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGACAGGGTTCTTCAATGTaGTGCAGCATGAAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLRQGSSM*CSMKQV
Trigger: GACCTGCTTCATGCTGCATCACATTGAAGAACCCTG...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GTCAGCCAAGCTAGCTGCCTCTTCAGTGCTGTCTCAGTAGGCTTTGTAGAAATGCAGGGTTCTTCAATGTaGTGCAGCATGAAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: VSQASCLFSAVSVGFVEMQGSSM*CSMKQV
Trigger: GACCTGCTTCATGCTGCATCACATTGAAGAACCCTG...CATTTCTACAAAGCCTACTGAGACAGCACTGAAGAGGCAGCTAGCTTGGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CTCCTAGACCATAAGGCCTTAGCTCTTTCCAAAGCCCAGGACCAATTTTTAAAAAGCCCCCTCCCCAGTTaGGAGTTCGAGCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LLDHKALALSKAQDQFLKSPLPS*EFEPGH
Trigger: ATGACCTGGCTCGAACTCTCAACTGGGGAGGGGGCT...TTTTAAAAATTGGTCCTGGGCTTTGGAAAGAGCTAAGGCCTTATGGTCTAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCTTCGAAAACGACTGTTaGATTTCTCTGGATTTGCTT +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVFENDC*ISLDLL
Trigger: AAGCAAATCCAGAGAAATTCAACAGTCGTTTTCGAA...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGTGGAACTTCAGTTCCTaGATCTTTGGGGTGAGATCT +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLWNFSS*IFGVRS
Trigger: AGATCTCACCCCAAAGATTCAGGAACTGAAGTTCCA...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCTGTACCATGTTGGCCTaGTTCCTCAGGGAGATCCGA +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCCTMLA*FLREIR
Trigger: TCGGATCTCCCTGAGGAATCAGGCCAACATGGTACA...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGTGTCCCCGCCGGCTGTaGCACCACCATATCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKCPRRL*HHHIWV
Trigger: GACCCAGATATGGTGGTGTCACAGCCGGCGGGGACA...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GTCAGCCAAGCTAGCTGCCTCTTCAGTGCTGTCTCAGTAGGCTTTGTAGAAATGACCCCCATACTACACTaGAGTTACACCTTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: VSQASCLFSAVSVGFVEMTPILH*SYTFPE
Trigger: TTCCGGGAAGGTGTAACTTCAGTGTAGTATGGGGGT...CATTTCTACAAAGCCTACTGAGACAGCACTGAAGAGGCAGCTAGCTTGGCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCAGACTTTTCTTTGCTTaGACTATGTACAAGCTGACA +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVRLFFA*TMYKLT
Trigger: TGTCAGCTTGTACATAGTTCAAGCAAAGAAAAGTCT...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCGAAACATTAGTCTACTaGTATGGGGTTAAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSETLVY*YGVKSC
Trigger: ACAAGACTTAACCCCATATCAGTAGACTAATGTTTC...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCACTCACCCAGTCAACCTaGAATCTAGGAACTCAAGCT +
Preference number: 4 (lower is better)
Translates to: KMATHRQYGAVQTAQAEPLTQST*NLGTQA
Trigger: AGCTTGAGTTCCTAGATTTCAGGTTGACTGGGTGAG...TGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCACAACTAATACCCCTTaGAGCCACTTTGAACAAATT +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVTTNTP*SHFEQI
Trigger: AATTTGTTCAAAGTGGCTTCAAGGGGTATTAGTTGT...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCATTCCGCTGCTGCTGCTaGCGCCCGTCGCCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPFRCCC*RPSPLS
Trigger: AGAAAGGGGCGACGGGCGGCAGCAGCAGCAGCGGAA...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCGCCTGCCCGGGAGATTaGTTTCCTGTACGAGACCTG +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSACPGD*FPVRDL
Trigger: CAGGTCTCGTACAGGAAAGCAATCTCCCGGGCAGGC...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGTGTGCAGGAGCCAGATaGTGGAGGCCTGCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVCAGAR*WRPARE
Trigger: CTCCCGGGCAGGCCTCCAGCATCTGGCTCCTGCACA...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp CTCAAATCACATATTCCTAATCACAACACCCCTCAGAGTGGTCAGGTATCCTCTCTTGGCTGGACCATTTaGCACAGGAAGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LKSHIPNHNTPQSGQVSSLGWTI*HRKAEG
Trigger: CCCCTCAGCCTTCCTGTGGCAAATGGTCCAGCCAAG...AGAGGATACCTGACCACTCTGAGGGGTGTTGTGATTAGGAATATGTGATTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614521.2
CDS-3UTR GCA 90 bp AAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCAGACGATTTTACAGACTaGACACTTCCTCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: KMATHRQYGAVQTAQAEPDDFTD*TLPPES
Trigger: GCTCTCAGGAGGAAGTGTGCAGTCTGTAAAATCGTC...TGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCTTTCTAGCTGCTCAATaGAGGCGGTGTGGACGACGA +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCFLAAQ*RRCGRR
Trigger: TCGTCGTCCACACCGCCTGCATTGAGCAGCTAGAAA...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCTTACATTTCCCCTCCTaGCGACGCCTGTGCACCCAG +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSLHFPS*RRLCTQ
Trigger: CTGGGTGCACAGGCGTCGGCAGGAGGGGAAATGTAA...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGGAAAGATCAAAGACTTaGCGTGGATTCAGGTACCAC +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLERSKT*RGFRYH
Trigger: GTGGTACCTGAATCCACGGCAAGTCTTTGATCTTTC...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCCCCAACTTGCAGGGCTaGCAAAGAGGCCATGGTAAA +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCPNLQG*QRGHGK
Trigger: TTTACCATGGCCTCTTTGGCAGCCCTGCAAGTTGGG...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGTGGATGTTCTCCTCTTaGTCTTCTGTACCATGTTGG +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLWMFSS*SSVPCW
Trigger: CCAACATGGTACAGAAGAGCAAGAGGAGAACATCCA...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGTTTTTCTAGTCCAAGATCTCTCACAATTAAAGATATGCCTTTGATCTCTGAGCCACCAGGTCAGGCATaGCCGGAGGTGTCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: SFSSPRSLTIKDMPLISEPPGQA*PEVSPP
Trigger: CGGCGGGGACACCTCCGGGCATGCCTGACCTGGTGG...CTCAGAGATCAAAGGCATATCTTTAATTGTGAGAGATCTTGGACTAGAAAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCCCTGAATTAGCAGACTaGCTCCATTTTTATAGCTTT +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSPELAD*LHFYSF
Trigger: AAAGCTATAAAAATGGAGGCAGTCTGCTAATTCAGG...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCTTCTTCCAGGGGAGCTaGCCAATTGCAGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSFFQGS*PIAGRA
Trigger: TGCCCTCCCTGCAATTGGGCAGCTCCCCTGGAAGAA...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCAGGGAGGATGGAGCAGTaGCATTTATACGAACATCCT +
Preference number: 4 (lower is better)
Translates to: KMATHRQYGAVQTAQAEPGRMEQ*HLYEHP
Trigger: AGGATGTTCGTATAAATGGCACTGCTCCATCCTCCC...TGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGACCTCCCTTGTGGTTaGCACGCTGGTGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQDLPCG*HAGGRS
Trigger: GCTTCTGCCACCAGCGTGGCAACCACAAGGGAGGTC...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGGCAGGAGCCAGATGCTaGAGGCCTGCCCGGGAGATT +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWAGARC*RPAREI
Trigger: AATCTCCCGGGCAGGCCTCCAGCATCTGGCTCCTGC...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp AAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCATCAATGCAGGCGGTGTaGACGACGATTTTACAGACT +
Preference number: 4 (lower is better)
Translates to: KMATHRQYGAVQTAQAEPSMQAV*TTILQT
Trigger: AGTCTGTAAAATCGTCGTCCACACCGCCTGCATTGA...TGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCAAAGGAGAACTTTTGCTaGAAGCCCTTACCACACTGC +
Preference number: 4 (lower is better)
Translates to: KMATHRQYGAVQTAQAEPKENFC*KPLPHC
Trigger: GCAGTGTGGTAAGGGCTTCCAGCAAAAGTTCTCCTT...TGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCACATCTGCAGGACTTTaGTTCCCTGGTTGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCTSAGL*FPGCLH
Trigger: GTGGAGGCAACCAGGGAACCAAAGTCCTGCAGATGT...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGACAGCCCGGTTCCGCTaGCAGGCAGCCTTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWTARFR*QAALCS
Trigger: ACTGCACAAGGCTGCCTGCCAGCGGAACCGGGCTGT...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGGCATCCACCAGAAGCTaGCACACAGCCCGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKASTRS*HTARFR
Trigger: GCGGAACCGGGCTGTGTGCCAGCTTCTGGTGGATGC...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGTAAGCAGCCAAGTCTaGGTCCCCAGCCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQVSSQV*VPSLLC
Trigger: GCACAGCAGGCTGGGGACCCAGACTTGGCTGCTTAC...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTGTAAGCAGCCAAGTCTaGGTCCCCAGCCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVVSSQV*VPSLLC
Trigger: GCACAGCAGGCTGGGGACCCAGACTTGGCTGCTTAC...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCCGATCTGGGACAGACTaGGGAATGGTGAAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSRSGTD*GMVKEP
Trigger: CGGCTCCTTCACCATTCCCCAGTCTGTCCCAGATCG...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424189.6
CDS-3UTR CCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGTACAGCCCAGCAGCCTaGGCTGACCCCTGGGTTACC +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWYSPAA*ADPWVT
Trigger: GGTAACCCAGGGGTCAGCCCAGGCTGCTGGGCTGTA...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCAGCAAAAGGCAAAGATaGCTACACATAGGCAGTACG +
Preference number: 4 (lower is better)
Translates to: SLVVATLVAEAKEFSMIASKRQR*LHIGST
Trigger: CGTACTGCCTATGTGTAGCCATCTTTGCCTTTTGCT...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGCCATGCTGGACACCCTaGGGTTCTCCTGCACTGCAC +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQPCWTP*GSPALH
Trigger: GTGCAGTGCAGGAGAACCCCAGGGTGTCCAGCATGG...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCTGTAGCCTTTGCGAGTaGAATACCCACAGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCCSLCE*NTHSQG
Trigger: CCCTTGGCTGTGGGTATTCCACTCGCAAAGGCTACA...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGCAAAAGCATGGCTCTaGGATGTGATAGGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: KAKMATHRQYGAVQTAQAAKAWL*DVIGQN
Trigger: ATTCTGCCCTATCACATCCCAGAGCCATGCTTTTGC...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGAGCCCCCTCCCCAGTTaGGAGTTCGAGCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWSPLPS*EFEPGH
Trigger: ATGACCTGGCTCGAACTCTCAACTGGGGAGGGGGCT...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGAGCCCCCTCCCCAGTTaGGAGTTCGAGCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKSPLPS*EFEPGH
Trigger: ATGACCTGGCTCGAACTCTCAACTGGGGAGGGGGCT...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGACATGGAACTCCAGTGTaGCATGGGCATCAAATCCAA +
Preference number: 4 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLRHGTPV*HGHQIQ
Trigger: TTGGATTTGATGCCCATGTCACACTGGAGTTCCATG...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGCATAGTCTTGTAAACTaGTTTTGTTCACCCGGATCC +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLHSLVN*FCSPGS
Trigger: GGATCCGGGTGAACAAAATCAGTTTACAAGACTATG...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCGCACGCGGGAGTGGCTaGGATCTTTCAGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSARGSG*DLSDLS
Trigger: ACTCAGATCTGAAAGATCTCAGCCACTCCCGCGTGC...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR TCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCCAGGGAGGGCAGATGTaGTACGCTTGCTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSQGGQM*YACSCP
Trigger: AGGACATGAGCAAGCGTATCACATCTGCCCTCCCTG...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGACCAGCAAAAGCCCAGTaGTTAAATTCTCCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLRPAKAQ*LNSPGA
Trigger: TGCTCCAGGAGAATTTAATCACTGGGCTTTTGCTGG...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGTCATCACATTTCCTTaGCAGTCCCGCCAACTAAAA +
Preference number: 4 (lower is better)
Translates to: KAKMATHRQYGAVQTAQAVITFP*QSRQLK
Trigger: TTTTAGTTGGCGGGACTGTCAAGGAAATGTGATGAC...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCAGTCATCACATTTCCTTaGCAGTCCCGCCAACTAAAA +
Preference number: 4 (lower is better)
Translates to: KMATHRQYGAVQTAQAEPVITFP*QSRQLK
Trigger: TTTTAGTTGGCGGGACTGTCAAGGAAATGTGATGAC...TGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGCAGATGCTGGAGGCCTaGCCGGGAGATTGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQQMLEA*PGDCFP
Trigger: AGGAAAGCAATCTCCCGGGCAGGCCTCCAGCATCTG...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGAAGGCTGAGGGGATGTaGAGGAGCCAGATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQKAEGM*RSQMLE
Trigger: CTCCAGCATCTGGCTCCTGCACATCCCCTCAGCCTT...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGCTTGGCTGGACCATTTaGCACAGGAAGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQLGWTI*HRKAEG
Trigger: CCCCTCAGCCTTCCTGTGGCAAATGGTCCAGCCAAG...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGAGACGATTTTACAGACTaGACACTTCCTCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLRDDFTD*TLPPES
Trigger: GCTCTCAGGAGGAAGTGTGCAGTCTGTAAAATCGTC...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCAAGCCCTTACCACACTaGTTACATTTCCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCKPLPH*LHFPSC
Trigger: GCAGGAGGGGAAATGTAAGCAGTGTGGTAAGGGCTT...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCGGCAGCCTTGTGCAGTaGAGTCTCACCCGTTTCACT +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSGSLVQ*SLTRFT
Trigger: AGTGAAACGGGTGAGACTGCACTGCACAAGGCTGCC...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GTCAGCCAAGCTAGCTGCCTCTTCAGTGCTGTCTCAGTAGGCTTTGTAGAAATGTGCTCATGTCCTCTTTaGCCGAATACCAGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: VSQASCLFSAVSVGFVEMCSCPL*PNTRVK
Trigger: TTTGACCCTGGTATTCGGGCAAAGAGGACATGAGCA...CATTTCTACAAAGCCTACTGAGACAGCACTGAAGAGGCAGCTAGCTTGGCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGTTCTTCCAGGGGAGCTaGCCAATTGCAGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQFFQGS*PIAGRA
Trigger: TGCCCTCCCTGCAATTGGGCAGCTCCCCTGGAAGAA...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGTTCTTCCAGGGGAGCTaGCCAATTGCAGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: QVCTALHQSLLISITVHLFFQGS*PIAGRA
Trigger: TGCCCTCCCTGCAATTGGGCAGCTCCCCTGGAAGAA...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCAAGCTGAACCAGTCCTaGATGGCTATTGGCTACAGC +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCKLNQS*MAIGYS
Trigger: GCTGTAGCCAATAGCCATGCAGGACTGGTTCAGCTT...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCAACCAGAACAAAGGGATaGCTTGACTGTGGATGTGAT +
Preference number: 4 (lower is better)
Translates to: KMATHRQYGAVQTAQAEPTRTKG*LDCGCD
Trigger: ATCACATCCACAGTCAAGGCATCCCTTTGTTCTGGT...TGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGATTGAACCAAAACATTaGTGGCTAATGAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLIEPKH*WLMSGW
Trigger: CCAGCCACTCATTAGCCAGCAATGTTTTGGTTCAAT...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCGAAGCAGGTCTTTTCTaGAAGACTCTGGATATGGAT +
Preference number: 4 (lower is better)
Translates to: SLVVATLVAEAKEFSMIAEAGLF*KTLDMD
Trigger: ATCCATATCCAGAGTCTTGCAGAAAAGACCTGCTTC...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGTCTCCCGAGACGTTaGTCTCCAGCCACAGGTGTT +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQGLPRR*SPATGV
Trigger: AACACCTGTGGCTGGAGACCAACGTCTCGGGAGACC...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGGGTCTCCCGAGACGTTaGTCTCCAGCCACAGGTGTT +
Preference number: 4 (lower is better)
Translates to: QVCTALHQSLLISITVHLGLPRR*SPATGV
Trigger: AACACCTGTGGCTGGAGACCAACGTCTCGGGAGACC...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGATCAAAGACTTGCCGTaGATTCAGGTACCACATGAA +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLIKDLP*IQVPHE
Trigger: TTCATGTGGTACCTGAATCCACGGCAAGTCTTTGAT...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCCAGAATTCGCAGATTTaGTACTTTCCTATACAATTC +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSQNSQI*YFPIQF
Trigger: GAATTGTATAGGAAAGTACCAAATCTGCGAATTCTG...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCATCATGGTGATCACCTaGGTTTCCCCAGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCIMVIT*VSPGHC
Trigger: ACAATGCCCTGGGGAAACCCAGGTGATCACCATGAT...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGCCACTTGCATGGGGATaGATTTGTAAGTTAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLPLAWG*ICKLEA
Trigger: TGCTTCTAACTTACAAATCCATCCCCATGCAAGTGG...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCCGATCTGGGACAGACTaGGGATCATTGAGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCRSGTD*GSLSKG
Trigger: GCCTTTACTCAATGATCCCCAGTCTGTCCCAGATCG...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGCTAGTTCCCCAGCAATaGTTCTTAACCAGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLLVPQQ*FLTSLK
Trigger: TTTCAGACTGGTTAAGAACCATTGCTGGGGAACTAG...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288490.9
ENST00000453654.6
CDS-3UTR CCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCTGTAGCACGCGGGAGTaGCTGAGATCTTTCAGATCT +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCCSTRE*LRSFRS
Trigger: AGATCTGAAAGATCTCAGCCACTCCCGCGTGCTACA...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGAACTCGGAAGGTCCGTaGTCAAGGATATATTTCACA +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLNSEGP*SRIYFT
Trigger: TGTGAAATATATCCTTGACCACGGACCTTCCGAGTT...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCAGCATCCACCAGAAGCTaGCACACAGCCCGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPASTRS*HTARFR
Trigger: GCGGAACCGGGCTGTGTGCCAGCTTCTGGTGGATGC...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGCATCCACCAGAAGCTaGCACACAGCCCGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVASTRS*HTARFR
Trigger: GCGGAACCGGGCTGTGTGCCAGCTTCTGGTGGATGC...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTCTGCCTCCTTCTCAATaGGCTATCATGTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: KAKMATHRQYGAVQTAQALPPSQ*AIMFCC
Trigger: ACAACAGAACATGATAGCCCATTGAGAAGGAGGCAG...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCAAGGATCAAATTTTGTaGAACTCGTACTGTATTCCA +
Preference number: 4 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSKDQIL*NSYCIP
Trigger: TGGAATACAGTACGAGTTCCACAAAATTTGATCCTT...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTAATGAAACGGAGGGTTaGCGGGTGAGGGGGACATGC +
Preference number: 4 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVNETEG*RVRGTC
Trigger: GCATGTCCCCCTCACCCGCCAACCCTCCGTTTCATT...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGCGCACCGGGGCATTGTaGGAAACTCCGCTCACTCCC +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVRTGAL*ETPLTP
Trigger: GGGAGTGAGCGGAGTTTCCCACAATGCCCCGGTGCG...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCACGCACCGGGGCATTGTaGGAAACTCCGCTCACTCCC +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPRTGAL*ETPLTP
Trigger: GGGAGTGAGCGGAGTTTCCCACAATGCCCCGGTGCG...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTGTCCTGCATGGCTATTaGCTACAGCCCAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVVLHGY*LQPSSL
Trigger: CAGGCTGCTGGGCTGTAGCCAATAGCCATGCAGGAC...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGGTAGGACCTCCCTTGTaGTTGCCACGCTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWVGPPL*LPRWWQ
Trigger: CTGCCACCAGCGTGGCAACCACAAGGGAGGTCCTAC...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCAGGAGATTTGGGAATTaGCTAACAATTGGCAAAATT +
Preference number: 4 (lower is better)
Translates to: PGELPNCREGRCDTLAHVRRFGN*LTIGKI
Trigger: AATTTTGCCAATTGTTAGCCAATTCCCAAATCTCCT...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCGGTACCCTGGATGCCTaGGAACGTTTTCCCACTCAG +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSGTLDA*ERFPTQ
Trigger: CTGAGTGGGAAAACGTTCCCAGGCATCCAGGGTACC...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GTCAGCCAAGCTAGCTGCCTCTTCAGTGCTGTCTCAGTAGGCTTTGTAGAAATGCTGATTTTGCAAATCTaGCTTGGCAGTTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: VSQASCLFSAVSVGFVEMLILQI*LGSSPL
Trigger: GAGAGGAGAACTGCCAAGTCAGATTTGCAAAATCAG...CATTTCTACAAAGCCTACTGAGACAGCACTGAAGAGGCAGCTAGCTTGGCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCCTGCACACTTCCTCCTaGGAGCTGATTTTGCAAATC +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCLHTSS*ELILQI
Trigger: GATTTGCAAAATCAGCTCTCAGGAGGAAGTGTGCAG...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCCAGGTCACCTTATTGTaGAACGCCTGCTTGCACCAG +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSQVTLL*NACLHQ
Trigger: CTGGTGCAAGCAGGCGTTTCACAATAAGGTGACCTG...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCCTTCTTCTTCCGATTTaGAGCCTTCAGGGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCLLLPI*SLQGVL
Trigger: CAGAACTCCCTGAAGGCTTCAAATCGGAAGAAGAAG...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCGGTTCGAAATCATGGTaGTCACCTGGGTTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSGSKSW*SPGFPQ
Trigger: CTGGGGAAACCCAGGTGATCACCATGATTTCGAACC...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCCAGACTGGGGATCATTaGGTAAAGGCATGGATGTTC +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCQTGDH*VKAWMF
Trigger: GAACATCCATGCCTTTACTCAATGATCCCCAGTCTG...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGCACGCGGGAGTGGCTaGGATCTTTCAGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQARGSG*DLSDLS
Trigger: ACTCAGATCTGAAAGATCTCAGCCACTCCCGCGTGC...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR TCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGCAGTGGTCTGGTCCCTaGATTAGCAGACTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQQWSGP*ISRLPP
Trigger: TGGAGGCAGTCTGCTAATTCAGGGACCAGACCACTG...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGCAGGGAGGGCAGATGTaGTACGCTTGCTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQQGGQM*YACSCP
Trigger: AGGACATGAGCAAGCGTATCACATCTGCCCTCCCTG...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCGGGTCCAAGTCGATCTaGCAGACCTGGCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVGSKSI*QTWQRR
Trigger: CCTTCTCTGCCAGGTCTGTCAGATCGACTTGGACCC...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGGGGTCCAAGTCGATCTaGCAGACCTGGCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKGSKSI*QTWQRR
Trigger: CCTTCTCTGCCAGGTCTGTCAGATCGACTTGGACCC...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CTCCTAGACCATAAGGCCTTAGCTCTTTCCAAAGCCCAGGACCAATTTTTAAAAAGGAAGCAGCAGCCGTaGTTGTGTACCCTCATGGGA +
Preference number: 4 (lower is better)
Translates to: LLDHKALALSKAQDQFLKRKQQP*LCTLMG
Trigger: TCCCATGAGGGTACACAATCACGGCTGCTGCTTCCT...TTTTAAAAATTGGTCCTGGGCTTTGGAAAGAGCTAAGGCCTTATGGTCTAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCTTTCTCATTAAGCTGTaGGGAGACAGTGTAAAACCA +
Preference number: 4 (lower is better)
Translates to: SLVVATLVAEAKEFSMIAFLIKL*GDSVKP
Trigger: TGGTTTTACACTGTCTCCTCACAGCTTAATGAGAAA...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTATCCCCGCTGCTAAGTaGTTTGGGATATATTTGCAA +
Preference number: 4 (lower is better)
Translates to: KAKMATHRQYGAVQTAQAIPAAK*FGIYLQ
Trigger: TTGCAAATATATCCCAAATCACTTAGCAGCGGGGAT...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGGAAGTCAGAAAAAGCTaGCCCTGCATAGAACATTTT +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLEVRKS*PCIEHF
Trigger: AAAATGTTCTATGCAGGGGCAGCTTTTTCTGACTTC...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCCCCAACTTGCAGGGCTaGCAAAGAGGCCATGGTAAA +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSPNLQG*QRGHGK
Trigger: TTTACCATGGCCTCTTTGGCAGCCCTGCAAGTTGGG...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGCACTGTCACTCAGCATaGGTTTCCGCAGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQHCHSA*VSAGQD
Trigger: ATCCTGCCCTGCGGAAACGCATGCTGAGTGACAGTG...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGCAGCCTTGTGCAGTaGAGTCTCACCCGTTTCACT +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQGSLVQ*SLTRFT
Trigger: AGTGAAACGGGTGAGACTGCACTGCACAAGGCTGCC...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCGTCCCCAGCCTGCTGTaGTCTTTCTTGAGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSVPSLL*SFLRCL
Trigger: AAGACACCTCAAGAAAGAGCACAGCAGGCTGGGGAC...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCTGCTCATGTCCTCTTTaGCCGAATACCAGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCCSCPL*PNTRVK
Trigger: TTTGACCCTGGTATTCGGGCAAAGAGGACATGAGCA...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCCACAGACATCTCCCATaGCACCTCACCATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSHRHLP*HLTIPQ
Trigger: CTGAGGAATGGTGAGGTGGCATGGGAGATGTCTGTG...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GTCAGCCAAGCTAGCTGCCTCTTCAGTGCTGTCTCAGTAGGCTTTGTAGAAATGAAAATTGAGTGGTTCTaGAAACTAGCTGTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: VSQASCLFSAVSVGFVEMKIEWF*KLAVGL
Trigger: GAGGCCCACAGCTAGTTTGCAGAACCACTCAATTTT...CATTTCTACAAAGCCTACTGAGACAGCACTGAAGAGGCAGCTAGCTTGGCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCTCTCAAAGCAGTCAGTaGCATGACACAAAGAAACAA +
Preference number: 4 (lower is better)
Translates to: SLVVATLVAEAKEFSMIASQSSQ*HDTKKQ
Trigger: TTGTTTCTTTGTGTCATGGCACTGACTGCTTTGAGA...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCACAAGGGTACCCTGGATaGCTGGGAACGTTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPQGYPG*LGTFSH
Trigger: GTGGGAAAACGTTCCCAGGCATCCAGGGTACCCTTG...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGGCCAGCTGGCAGCTTTaGAAAAGCATGGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: QVCTALHQSLLISITVHLASWQL*KSMALG
Trigger: TCCCAGAGCCATGCTTTTGCAAAGCTGCCAGCTGGC...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCTTTATGGATTCCACCTaGCAGCTGGCAGCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCFMDST*QLAALQ
Trigger: TTGCAAAGCTGCCAGCTGGCAGGTGGAATCCATAAA...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGTCTGGGCTCCTTGGCTaGACCATTTGCCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQSGLLG*TICHRK
Trigger: CTTCCTGTGGCAAATGGTCCAGCCAAGGAGCCCAGA...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGTCGCTCTGGGCTCCTTaGCTGGACCATTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWSLWAP*LDHLPQ
Trigger: CTGTGGCAAATGGTCCAGCCAAGGAGCCCAGAGCGA...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGAGTCCAAAGTCGCTCTaGGCTCCTTGGCTGGACCAT +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQSPKSL*APWLDH
Trigger: ATGGTCCAGCCAAGGAGCCCAGAGCGACTTTGGACT...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTAGTCCAAAGTCGCTCTaGGCTCCTTGGCTGGACCAT +
Preference number: 4 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVSPKSL*APWLDH
Trigger: ATGGTCCAGCCAAGGAGCCCAGAGCGACTTTGGACT...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614521.2
CDS-3UTR CCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGGGTCTCCCGAGACGTTaGTCTCCAGCCACAGGTGTT +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWGLPRR*SPATGV
Trigger: AACACCTGTGGCTGGAGACCAACGTCTCGGGAGACC...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGGGTCTCCCGAGACGTTaGTCTCCAGCCACAGGTGTT +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKGLPRR*SPATGV
Trigger: AACACCTGTGGCTGGAGACCAACGTCTCGGGAGACC...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCGGTCTCCCGAGACGTTaGTCTCCAGCCACAGGTGTT +
Preference number: 4 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVGLPRR*SPATGV
Trigger: AACACCTGTGGCTGGAGACCAACGTCTCGGGAGACC...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCTCAATGCAGGCGGTGTaGACGACGATTTTACAGACT +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCSMQAV*TTILQT
Trigger: AGTCTGTAAAATCGTCGTCCACACCGCCTGCATTGA...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCAAGGAGAACTTTTGCTaGAAGCCCTTACCACACTGC +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCKENFC*KPLPHC
Trigger: GCAGTGTGGTAAGGGCTTCCAGCAAAAGTTCTCCTT...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCAACTCCAGTGTGACATaGGCATCAAATCCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCNSSVT*ASNPRL
Trigger: CAGCCTTGGATTTGATGCCCATGTCACACTGGAGTT...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCGCTTCTCTGGATTCATaGAACTCCAGTGTGACATGG +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCASLDS*NSSVTW
Trigger: CCATGTCACACTGGAGTTCCATGAATCCAGAGAAGC...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGTGTAGCCTCTCTCCATaGCCCCCAACTTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWCSLSP*PPTCRA
Trigger: AGCCCTGCAAGTTGGGGGCCATGGAGAGAGGCTACA...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGAATGAAACGGAGGGTTaGCGGGTGAGGGGGACATGC +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWNETEG*RVRGTC
Trigger: GCATGTCCCCCTCACCCGCCAACCCTCCGTTTCATT...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGTTTCTGCTTTCTTTCTaGGACCTGGTCAGTAAATCT +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLFLLSF*DLVSKS
Trigger: AGATTTACTGACCAGGTCCCAGAAAGAAAGCAGAAA...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCATGGCTAATGAGTGGCTaGTACAATAAAGCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: KMATHRQYGAVQTAQAEPWLMSG*YNKALV
Trigger: AACCAAGGCTTTATTGTACCAGCCACTCATTAGCCA...TGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGATTGTGGTTGCCACGCTaGTGGCAGAAGCCAAAGAGT +
Preference number: 4 (lower is better)
Translates to: ALYNVTATLHTDVAFASGLWLPR*WQKPKS
Trigger: ACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAA...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTCATTATTCACCTCGTTaGGGTTGTTTTGAACCCCAA +
Preference number: 4 (lower is better)
Translates to: KAKMATHRQYGAVQTAQAHYSPR*GCFEPQ
Trigger: TTGGGGTTCAAAACAACCCCAACGAGGTGAATAATG...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCTCTCCTTCCCCAGGATaGCAAGAATCCAAACTTTCC +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCSPSPG*QESKLS
Trigger: GGAAAGTTTGGATTCTTGCCATCCTGGGGAAGGAGA...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCCTTCCTCCTGAGAGCTaGTTTTGCAAATCTGACTTG +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCLPPES*FCKSDL
Trigger: CAAGTCAGATTTGCAAAATCAGCTCTCAGGAGGAAG...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGCAGGTCACCTTATTGTaGAACGCCTGCTTGCACCAG +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQQVTLL*NACLHQ
Trigger: CTGGTGCAAGCAGGCGTTTCACAATAAGGTGACCTG...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCCAATGTGATGCAGCATaGAGCAGGTCACCTTATTGT +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCQCDAA*SRSPYC
Trigger: ACAATAAGGTGACCTGCTTCATGCTGCATCACATTG...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCCAGGGTTCTTCAATGTaGTGCAGCATGAAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSQGSSM*CSMKQV
Trigger: GACCTGCTTCATGCTGCATCACATTGAAGAACCCTG...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGTTCGAAAACGACTGTTaGATTTCTCTGGATTTGCTT +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLFENDC*ISLDLL
Trigger: AAGCAAATCCAGAGAAATTCAACAGTCGTTTTCGAA...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCTGGAACTTCAGTTCCTaGATCTTTGGGGTGAGATCT +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCWNFSS*IFGVRS
Trigger: AGATCTCACCCCAAAGATTCAGGAACTGAAGTTCCA...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGTTCGAAATCATGGTaGTCACCTGGGTTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQGSKSW*SPGFPQ
Trigger: CTGGGGAAACCCAGGTGATCACCATGATTTCGAACC...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGATGTAAGTTAGAAGCATaGCTTCTCGACACTGGTGTA +
Preference number: 4 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLRCKLEA*LLDTGV
Trigger: TACACCAGTGTCGAGAAGTCATGCTTCTAACTTACA...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGTGTACCATGTTGGCCTaGTTCCTCAGGGAGATCCGA +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQCTMLA*FLREIR
Trigger: TCGGATCTCCCTGAGGAATCAGGCCAACATGGTACA...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GTCAGCCAAGCTAGCTGCCTCTTCAGTGCTGTCTCAGTAGGCTTTGTAGAAATGCATAGTCTTGTAAACTaGTTTTGTTCACCCGGATCC +
Preference number: 4 (lower is better)
Translates to: VSQASCLFSAVSVGFVEMHSLVN*FCSPGS
Trigger: GGATCCGGGTGAACAAAATCAGTTTACAAGACTATG...CATTTCTACAAAGCCTACTGAGACAGCACTGAAGAGGCAGCTAGCTTGGCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGCAGTGGTCTGGTCCCTaGATTAGCAGACTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKQWSGP*ISRLPP
Trigger: TGGAGGCAGTCTGCTAATTCAGGGACCAGACCACTG...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGTGCGTAGTGAAGGAGTaGACAGTGGTCTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKCVVKE*TVVWSL
Trigger: CAGGGACCAGACCACTGTTCACTCCTTCACTACGCA...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCTGCTGTGCTCTTTCTTaGGGTGTCTTACCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSCCALS*GVLPLE
Trigger: CTCCAAGGGTAAGACACCTCAAGAAAGAGCACAGCA...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CTCAAATCACATATTCCTAATCACAACACCCCTCAGAGTGGTCAGGTATCCTCTTGCTGTGCTCTTTCTTaGGGTGTCTTACCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LKSHIPNHNTPQSGQVSSCCALS*GVLPLE
Trigger: CTCCAAGGGTAAGACACCTCAAGAAAGAGCACAGCA...AGAGGATACCTGACCACTCTGAGGGGTGTTGTGATTAGGAATATGTGATTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGCAGGGAGGGCAGATGTaGTACGCTTGCTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWQGGQM*YACSCP
Trigger: AGGACATGAGCAAGCGTATCACATCTGCCCTCCCTG...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCATTTCTCATTAAGCTGTaGGGAGACAGTGTAAAACCA +
Preference number: 4 (lower is better)
Translates to: KMATHRQYGAVQTAQAEPFLIKL*GDSVKP
Trigger: TGGTTTTACACTGTCTCCTCACAGCTTAATGAGAAA...TGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCCGACAGCAAAAACTCTaGCTTTTTGATTTCACATTC +
Preference number: 4 (lower is better)
Translates to: SLVVATLVAEAKEFSMIARQQKL*LFDFTF
Trigger: GAATGTGAAATCAAAAAGTCAGAGTTTTTGCTGTCG...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTAAGCCCTTTATAATGTaGCTGCAACTCTTCATACAG +
Preference number: 4 (lower is better)
Translates to: KAKMATHRQYGAVQTAQAKPFIM*LQLFIQ
Trigger: CTGTATGAAGAGTTGCAGTCACATTATAAAGGGCTT...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCGCCTGCCCGGGAGATTaGTTTCCTGTACGAGACCTG +
Preference number: 4 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTACPGD*FPVRDL
Trigger: CAGGTCTCGTACAGGAAAGCAATCTCCCGGGCAGGC...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614521.2
CDS-3UTR GCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGAAGGCTGAGGGGATGTaGAGGAGCCAGATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVKAEGM*RSQMLE
Trigger: CTCCAGCATCTGGCTCCTGCACATCCCCTCAGCCTT...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCACTTGGCTGGACCATTTaGCACAGGAAGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPLGWTI*HRKAEG
Trigger: CCCCTCAGCCTTCCTGTGGCAAATGGTCCAGCCAAG...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTCCCAACTTGCAGGGCTaGCAAAGAGGCCATGGTAAA +
Preference number: 4 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVPNLQG*QRGHGK
Trigger: TTTACCATGGCCTCTTTGGCAGCCCTGCAAGTTGGG...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCTGGATGTTCTCCTCTTaGTCTTCTGTACCATGTTGG +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCWMFSS*SSVPCW
Trigger: CCAACATGGTACAGAAGAGCAAGAGGAGAACATCCA...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGCCTGAATTAGCAGACTaGCTCCATTTTTATAGCTTT +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLPELAD*LHFYSF
Trigger: AAAGCTATAAAAATGGAGGCAGTCTGCTAATTCAGG...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCATGGCAGGCAGCCTTGTaGAGTGCAGTCTCACCCGTT +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPWQAAL*SAVSPV
Trigger: AACGGGTGAGACTGCACTGCACAAGGCTGCCTGCCA...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCAGTCCCCAGCCTGCTGTaGTCTTTCTTGAGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPVPSLL*SFLRCL
Trigger: AAGACACCTCAAGAAAGAGCACAGCAGGCTGGGGAC...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCCCAGCTCACTCGCACTaGCTTTTCAAACCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSPAHSH*LFKPSA
Trigger: AGCTGAAGGTTTGAAAAGGCAGTGCGAGTGAGCTGG...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453654.6
CDS-3UTR GCA 90 bp CTCCTAGACCATAAGGCCTTAGCTCTTTCCAAAGCCCAGGACCAATTTTTAAAAGTCAGCCAAGCTAGCTaGCTCTTCAGTGCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: LLDHKALALSKAQDQFLKVSQAS*LFSAVS
Trigger: TGAGACAGCACTGAAGAGGCAGCTAGCTTGGCTGAC...TTTTAAAAATTGGTCCTGGGCTTTGGAAAGAGCTAAGGCCTTATGGTCTAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CTCAAATCACATATTCCTAATCACAACACCCCTCAGAGTGGTCAGGTATCCTCTCAGCACAGGCAGATCTaGCAAAGCAGCCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: LKSHIPNHNTPQSGQVSSQHRQI*QSSHSE
Trigger: TTCAGAATGGCTGCTTTGGCAGATCTGCCTGTGCTG...AGAGGATACCTGACCACTCTGAGGGGTGTTGTGATTAGGAATATGTGATTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CTCAAATCACATATTCCTAATCACAACACCCCTCAGAGTGGTCAGGTATCCTCTGGAAGGAAGACAAGCTaGTCAGACCCCCATACTACA +
Preference number: 4 (lower is better)
Translates to: LKSHIPNHNTPQSGQVSSGRKTS*SDPHTT
Trigger: TGTAGTATGGGGGTCTGAGCAGCTTGTCTTCCTTCC...AGAGGATACCTGACCACTCTGAGGGGTGTTGTGATTAGGAATATGTGATTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCAGACTCTGGAGTCTATaGATTATGAAGATACCATTC +
Preference number: 4 (lower is better)
Translates to: SLVVATLVAEAKEFSMIARLWSL*IMKIPF
Trigger: GAATGGTATCTTCATAATGCATAGACTCCAGAGTCT...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGTCTGGGCTCCTTGGCTaGACCATTTGCCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWSGLLG*TICHRK
Trigger: CTTCCTGTGGCAAATGGTCCAGCCAAGGAGCCCAGA...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGAGTCCAAAGTCGCTCTaGGCTCCTTGGCTGGACCAT +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKSPKSL*APWLDH
Trigger: ATGGTCCAGCCAAGGAGCCCAGAGCGACTTTGGACT...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCATGTAGCCTCTCTCCATaGCCCCCAACTTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPCSLSP*PPTCRA
Trigger: AGCCCTGCAAGTTGGGGGCCATGGAGAGAGGCTACA...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCGATCCGAATCATAGCTaGGGCCAACCTACAGGGCTC +
Preference number: 4 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVDPNHS*GQPTGL
Trigger: GAGCCCTGTAGGTTGGCCCCAGCTATGATTCGGATC...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCGAGGTGTCTTACCCTTaGAGTCCGTCTTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSEVSYP*SPSFSE
Trigger: CTCTGAGAAAGACGGACTCCAAGGGTAAGACACCTC...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGAATGAAACGGAGGGTTaGCGGGTGAGGGGGACATGC +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVNETEG*RVRGTC
Trigger: GCATGTCCCCCTCACCCGCCAACCCTCCGTTTCATT...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATGCCTGGGCTGACCCCTaGGTTACCTCTCTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: VRESIKVLLALEIMLVCNAWADP*VTSLRY
Trigger: GTACCTCAGAGAGGTAACCCAGGGGTCAGCCCAGGC...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCCTGGCTAGATTCCAATaGTGGTTTGCACTAAGGACT +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCLARFQ*WFALRT
Trigger: AGTCCTTAGTGCAAACCACCATTGGAATCTAGCCAG...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCACTCAATCCAGGGAATaGAAGATGCCATTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCTQSRE*KMPFKA
Trigger: GGCTTTGAATGGCATCTTCCATTCCCTGGATTGAGT...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTACATGCTACAGGAGGTaGTTTAATGTTGAAGCCATT +
Preference number: 4 (lower is better)
Translates to: KAKMATHRQYGAVQTAQATCYRR*FNVEAI
Trigger: AATGGCTTCAACATTAAACCACCTCCTGTAGCATGT...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCATACTTAAGCTGAGATaGAAACTCCTAGACCATAAG +
Preference number: 4 (lower is better)
Translates to: SLVVATLVAEAKEFSMIAILKLR*KLLDHK
Trigger: CTTATGGTCTAGGAGTTTCCATCTCAGCTTAAGTAT...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGATGGTTGCCACGCTGGTaGCAGAAGCCAAAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: ALYNVTATLHTDVAFASGWLPRW*QKPKSF
Trigger: AAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCA...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCATTGTGGTTGCCACGCTaGTGGCAGAAGCCAAAGAGT +
Preference number: 4 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPLWLPR*WQKPKS
Trigger: ACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAA...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGAGCTGCTACTTGTTTATaGATTCCACCTGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ALYNVTATLHTDVAFASGAATCL*IPPASW
Trigger: CCAGCTGGCAGGTGGAATCCATAAACAAGTAGCAGC...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CTCAAATCACATATTCCTAATCACAACACCCCTCAGAGTGGTCAGGTATCCTCTGCTGCTACTTGTTTATaGATTCCACCTGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LKSHIPNHNTPQSGQVSSAATCL*IPPASW
Trigger: CCAGCTGGCAGGTGGAATCCATAAACAAGTAGCAGC...AGAGGATACCTGACCACTCTGAGGGGTGTTGTGATTAGGAATATGTGATTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CTCAAATCACATATTCCTAATCACAACACCCCTCAGAGTGGTCAGGTATCCTCTGATTCAGGTACCACATaGACATCTGCAGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: LKSHIPNHNTPQSGQVSSDSGTT*TSAGLW
Trigger: CCAAAGTCCTGCAGATGTTCATGTGGTACCTGAATC...AGAGGATACCTGACCACTCTGAGGGGTGTTGTGATTAGGAATATGTGATTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGGCAACATAAACAATTACAGGAACTCTTGGTCATGAATTTTATGACACAGGTAAGCCCCCTCCCCAGTTaGGAGTTCGAGCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: RQHKQLQELLVMNFMTQVSPLPS*EFEPGH
Trigger: ATGACCTGGCTCGAACTCTCAACTGGGGAGGGGGCT...TACCTGTGTCATAAAATTCATGACCAAGAGTTCCTGTAATTGTTTATGTTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGTGTACCATGTTGGCCTaGTTCCTCAGGGAGATCCGA +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWCTMLA*FLREIR
Trigger: TCGGATCTCCCTGAGGAATCAGGCCAACATGGTACA...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCACAGTGGTCTGGTCCCTaGATTAGCAGACTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPQWSGP*ISRLPP
Trigger: TGGAGGCAGTCTGCTAATTCAGGGACCAGACCACTG...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCATGCGTAGTGAAGGAGTaGACAGTGGTCTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPCVVKE*TVVWSL
Trigger: CAGGGACCAGACCACTGTTCACTCCTTCACTACGCA...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGTGCGTAGTGAAGGAGTaGACAGTGGTCTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVCVVKE*TVVWSL
Trigger: CAGGGACCAGACCACTGTTCACTCCTTCACTACGCA...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGGGTCCTCATGGCCAATaGCCTTATAGTTCTGACGGC +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKGPHGQ*PYSSDG
Trigger: GCCGTCAGAACTATAAGGTCATTGGCCATGAGGACC...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCCAGGGAGGGCAGATGTaGTACGCTTGCTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTQGGQM*YACSCP
Trigger: AGGACATGAGCAAGCGTATCACATCTGCCCTCCCTG...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCGTTGAAGCATCCTTCTaGATGATCCAGGCATCCCAT +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSVEASF*MIQASH
Trigger: ATGGGATGCCTGGATCATTCAGAAGGATGCTTCAAC...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GTCAGCCAAGCTAGCTGCCTCTTCAGTGCTGTCTCAGTAGGCTTTGTAGAAATGTACGACCTTTGGACCTaGCAAATAATAGTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: VSQASCLFSAVSVGFVEMYDLWT*QIIVEA
Trigger: TGCTTCAACTATTATTTGTCAGGTCCAAAGGTCGTA...CATTTCTACAAAGCCTACTGAGACAGCACTGAAGAGGCAGCTAGCTTGGCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCCCAAAGCAGCCATTCTaGAAGGATAAGGAGCAACAG +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSPKQPF*KDKEQQ
Trigger: CTGTTGCTCCTTATCCTTTCAGAATGGCTGCTTTGG...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CTCAAATCACATATTCCTAATCACAACACCCCTCAGAGTGGTCAGGTATCCTCTCCAAAGCAGCCATTCTaGAAGGATAAGGAGCAACAG +
Preference number: 4 (lower is better)
Translates to: LKSHIPNHNTPQSGQVSSPKQPF*KDKEQQ
Trigger: CTGTTGCTCCTTATCCTTTCAGAATGGCTGCTTTGG...AGAGGATACCTGACCACTCTGAGGGGTGTTGTGATTAGGAATATGTGATTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCAGGAAGCAGCAGCCGTaGTTGTGTACCCTCATGGGA +
Preference number: 4 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTRKQQP*LCTLMG
Trigger: TCCCATGAGGGTACACAATCACGGCTGCTGCTTCCT...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CTCAAATCACATATTCCTAATCACAACACCCCTCAGAGTGGTCAGGTATCCTCTCTCACCCAGTCAACCTaGAATCTAGGAACTCAAGCT +
Preference number: 4 (lower is better)
Translates to: LKSHIPNHNTPQSGQVSSLTQST*NLGTQA
Trigger: AGCTTGAGTTCCTAGATTTCAGGTTGACTGGGTGAG...AGAGGATACCTGACCACTCTGAGGGGTGTTGTGATTAGGAATATGTGATTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTACAACTAATACCCCTTaGAGCCACTTTGAACAAATT +
Preference number: 4 (lower is better)
Translates to: KAKMATHRQYGAVQTAQATTNTP*SHFEQI
Trigger: AATTTGTTCAAAGTGGCTTCAAGGGGTATTAGTTGT...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCTCTCAATCCAACCAATaGTGGGTGGGGAGAGTGGCG +
Preference number: 4 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTSQSNQ*WVGRVA
Trigger: CGCCACTCTCCCCACCCATCATTGGTTGGATTGAGA...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCGACGATTTTACAGACTaGACACTTCCTCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSDDFTD*TLPPES
Trigger: GCTCTCAGGAGGAAGTGTGCAGTCTGTAAAATCGTC...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGTTTCTAGCTGCTCAATaGAGGCGGTGTGGACGACGA +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWFLAAQ*RRCGRR
Trigger: TCGTCGTCCACACCGCCTGCATTGAGCAGCTAGAAA...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGTTTCTAGCTGCTCAATaGAGGCGGTGTGGACGACGA +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKFLAAQ*RRCGRR
Trigger: TCGTCGTCCACACCGCCTGCATTGAGCAGCTAGAAA...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGCTTTGGTTCCCTGGTTaGCTCCACTCTTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQLWFPG*LHSWDS
Trigger: TGAATCCCAAGAGTGGAGGCAACCAGGGAACCAAAG...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGATACCACATGAACATCTaGAGGACTTTGGTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: ALYNVTATLHTDVAFASGYHMNI*RTLVPW
Trigger: CCAGGGAACCAAAGTCCTGCAGATGTTCATGTGGTA...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGCCCAACTTGCAGGGCTaGCAAAGAGGCCATGGTAAA +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWPNLQG*QRGHGK
Trigger: TTTACCATGGCCTCTTTGGCAGCCCTGCAAGTTGGG...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGCACTGTCACTCAGCATaGGTTTCCGCAGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVHCHSA*VSAGQD
Trigger: ATCCTGCCCTGCGGAAACGCATGCTGAGTGACAGTG...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGCGTCTTTCTCAGAGATaGTCCTGCATCCACCAGAAG +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQRLSQR*SCIHQK
Trigger: CTTCTGGTGGATGCAGGAGCATCTCTGAGAAAGACG...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCACGTCTTTCTCAGAGATaGTCCTGCATCCACCAGAAG +
Preference number: 4 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPRLSQR*SCIHQK
Trigger: CTTCTGGTGGATGCAGGAGCATCTCTGAGAAAGACG...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGGTCCCCAGCCTGCTGTaGTCTTTCTTGAGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWVPSLL*SFLRCL
Trigger: AAGACACCTCAAGAAAGAGCACAGCAGGCTGGGGAC...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCCACAGACATCTCCCATaGCACCTCACCATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVHRHLP*HLTIPQ
Trigger: CTGAGGAATGGTGAGGTGGCATGGGAGATGTCTGTG...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCCCAAGTCAATTAGGGTaGTTTCTATTATCATTCAAC +
Preference number: 4 (lower is better)
Translates to: SLVVATLVAEAKEFSMIAPSQLG*FLLSFN
Trigger: GTTGAATGATAATAGAAAGCACCCTAATTGACTTGG...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGACCAGGGAATGGAAGATaGCATTCAAAGCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: ALYNVTATLHTDVAFASGPGNGR*HSKPDS
Trigger: GGAATCTGGCTTTGAATGGCATCTTCCATTCCCTGG...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTGGAAGGAAGACAAGCTaGTCAGACCCCCATACTACA +
Preference number: 4 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVGRKTS*SDPHTT
Trigger: TGTAGTATGGGGGTCTGAGCAGCTTGTCTTCCTTCC...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGATGCAGCACTATCATTTaGTATATGAATCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLRCSTII*YMNLHR
Trigger: CCTGTGCAGATTCATATAGCAAATGATAGTGCTGCA...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGCTTTCCTCACAACTCTaGCCCTCTTTTATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: QVCTALHQSLLISITVHLLSSQL*PSFMPP
Trigger: TGGGGGCATAAAAGAGGGGCAGAGTTGTGAGGAAAG...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCAAGTCCAAAGTCGCTCTaGGCTCCTTGGCTGGACCAT +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPSPKSL*APWLDH
Trigger: ATGGTCCAGCCAAGGAGCCCAGAGCGACTTTGGACT...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCAAGGAGAACTTTTGCTaGAAGCCCTTACCACACTGC +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSKENFC*KPLPHC
Trigger: GCAGTGTGGTAAGGGCTTCCAGCAAAAGTTCTCCTT...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GTCAGCCAAGCTAGCTGCCTCTTCAGTGCTGTCTCAGTAGGCTTTGTAGAAATGACAATCTCTTTACTGTaGAAGGAGAACTTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: VSQASCLFSAVSVGFVEMTISLL*KENFCW
Trigger: CCAGCAAAAGTTCTCCTTCCACAGTAAAGAGATTGT...CATTTCTACAAAGCCTACTGAGACAGCACTGAAGAGGCAGCTAGCTTGGCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGACATCTGCAGGACTTTaGTTCCCTGGTTGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWTSAGL*FPGCLH
Trigger: GTGGAGGCAACCAGGGAACCAAAGTCCTGCAGATGT...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGCAGAATTCGCAGATTTaGTACTTTCCTATACAATTC +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLQNSQI*YFPIQF
Trigger: GAATTGTATAGGAAAGTACCAAATCTGCGAATTCTG...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGTTTCTTTCCACATaGAGGTTCCAGCGATCTAGC +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQGFLST*RFQRSS
Trigger: GCTAGATCGCTGGAACCTCCATGTGGAAAGAAACCC...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCAACTCCAGTGTGACATaGGCATCAAATCCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSNSSVT*ASNPRL
Trigger: CAGCCTTGGATTTGATGCCCATGTCACACTGGAGTT...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGATCATGGTGATCACCTaGGTTTCCCCAGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQIMVIT*VSPGHC
Trigger: ACAATGCCCTGGGGAAACCCAGGTGATCACCATGAT...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATTGTAGCCTCTCTCCATaGCCCCCAACTTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VRESIKVLLALEIMLVCNCSLSP*PPTCRA
Trigger: AGCCCTGCAAGTTGGGGGCCATGGAGAGAGGCTACA...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGATGACTTCTCGACACTaGTGTAGCCTCTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQMTSRH*CSLSPW
Trigger: CCATGGAGAGAGGCTACACCAGTGTCGAGAAGTCAT...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCCCACTTGCATGGGGATaGATTTGTAAGTTAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCPLAWG*ICKLEA
Trigger: TGCTTCTAACTTACAAATCCATCCCCATGCAAGTGG...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCAGATCCGAATCATAGCTaGGGCCAACCTACAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPDPNHS*GQPTGL
Trigger: GAGCCCTGTAGGTTGGCCCCAGCTATGATTCGGATC...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCTCTTCTGTACCATGTTaGCCTGATTCCTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSSSVPC*PDSSGR
Trigger: TCTCCCTGAGGAATCAGGCCAACATGGTACAGAAGA...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCATGTAGCACGCGGGAGTaGCTGAGATCTTTCAGATCT +
Preference number: 4 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPCSTRE*LRSFRS
Trigger: AGATCTGAAAGATCTCAGCCACTCCCGCGTGCTACA...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614521.2
CDS-3UTR CCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGAGGTGTCTTACCCTTaGAGTCCGTCTTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQEVSYP*SPSFSE
Trigger: CTCTGAGAAAGACGGACTCCAAGGGTAAGACACCTC...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGAAGGATCAAATTTTGTaGAACTCGTACTGTATTCCA +
Preference number: 4 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLKDQIL*NSYCIP
Trigger: TGGAATACAGTACGAGTTCCACAAAATTTGATCCTT...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CTCCTAGACCATAAGGCCTTAGCTCTTTCCAAAGCCCAGGACCAATTTTTAAAATGCATAGGGGGAGGATaGAGCAGTGCCATTTATACG +
Preference number: 4 (lower is better)
Translates to: LLDHKALALSKAQDQFLKCIGGG*SSAIYT
Trigger: CGTATAAATGGCACTGCTCCATCCTCCCCCTATGCA...TTTTAAAAATTGGTCCTGGGCTTTGGAAAGAGCTAAGGCCTTATGGTCTAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCTTGACATTATCCATGTaGCACTTCCCAGCTCCTATA +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCLTLSM*HFPAPI
Trigger: TATAGGAGCTGGGAAGTGCCACATGGATAATGTCAA...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGGATCCTCAGACGATCTaGGACAGACTGGGGAATGGT +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKDPQTI*DRLGNG
Trigger: ACCATTCCCCAGTCTGTCCCAGATCGTCTGAGGATC...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424189.6
CDS-3UTR CCA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGACTGCTCACTTTATTTTaGAAATCCCAAGTCCTAGTG +
Preference number: 4 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLRLLTLF*KSQVLV
Trigger: CACTAGGACTTGGGATTTCCAAAATAAAGTGAGCAG...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GTCAGCCAAGCTAGCTGCCTCTTCAGTGCTGTCTCAGTAGGCTTTGTAGAAATGTTTCTGCTTTCTTTCTaGGACCTGGTCAGTAAATCT +
Preference number: 4 (lower is better)
Translates to: VSQASCLFSAVSVGFVEMFLLSF*DLVSKS
Trigger: AGATTTACTGACCAGGTCCCAGAAAGAAAGCAGAAA...CATTTCTACAAAGCCTACTGAGACAGCACTGAAGAGGCAGCTAGCTTGGCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGTGGTTGCCACGCTGGTaGCAGAAGCCAAAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: QVCTALHQSLLISITVHLWLPRW*QKPKSF
Trigger: AAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCA...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCACCAGAACAAGTTTGTaGACAGGCATAATGTATTAT +
Preference number: 4 (lower is better)
Translates to: SLVVATLVAEAKEFSMIATRTSL*TGIMYY
Trigger: ATAATACATTATGCCTGTCCACAAACTTGTTCTGGT...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GTCAGCCAAGCTAGCTGCCTCTTCAGTGCTGTCTCAGTAGGCTTTGTAGAAATGAGATCAGGAGCCATTTaGTTGCATATAGAAGGTACA +
Preference number: 4 (lower is better)
Translates to: VSQASCLFSAVSVGFVEMRSGAI*LHIEGT
Trigger: TGTACCTTCTATATGCAACCAAATGGCTCCTGATCT...CATTTCTACAAAGCCTACTGAGACAGCACTGAAGAGGCAGCTAGCTTGGCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGAGCAAAAGCATGGCTCTaGGATGTGATAGGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: ALYNVTATLHTDVAFASGAKAWL*DVIGQN
Trigger: ATTCTGCCCTATCACATCCCAGAGCCATGCTTTTGC...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGATTCCACCTGCCAGCTaGCAGCTTTGCAAAAGCATG +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQIPPAS*QLCKSM
Trigger: CATGCTTTTGCAAAGCTGCCAGCTGGCAGGTGGAAT...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CAA 72 bp GGGAAGTGGGACACAACACCAGAACAAAGGGATGCCTaGACTGTGGATGTGATACTCATCTGTGGTATTAAA +
Preference number: 4 (lower is better)
Translates to: GKWDTTPEQRDA*TVDVILICGIK
Trigger: TTTAATACCACAGATGAGTATCACATCCACAGTCAAGGCATCCCTTTGTTCTGGTGTTGTGTCCCACTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCCTGATTTTGCAAATCTaGCTTGGCAGTTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSLILQI*LGSSPL
Trigger: GAGAGGAGAACTGCCAAGTCAGATTTGCAAAATCAG...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCCAGGTCACCTTATTGTaGAACGCCTGCTTGCACCAG +
Preference number: 4 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTQVTLL*NACLHQ
Trigger: CTGGTGCAAGCAGGCGTTTCACAATAAGGTGACCTG...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGCAGGTCACCTTATTGTaGAACGCCTGCTTGCACCAG +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVQVTLL*NACLHQ
Trigger: CTGGTGCAAGCAGGCGTTTCACAATAAGGTGACCTG...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGCTTCTTCTTCCGATTTaGAGCCTTCAGGGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQLLLPI*SLQGVL
Trigger: CAGAACTCCCTGAAGGCTTCAAATCGGAAGAAGAAG...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTCTTCTTCTTCCGATTTaGAGCCTTCAGGGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVLLLPI*SLQGVL
Trigger: CAGAACTCCCTGAAGGCTTCAAATCGGAAGAAGAAG...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCGTCCCATCTTCCACTTaGCACAGGATCTTAGAAACA +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSVPSST*HRILET
Trigger: TGTTTCTAAGATCCTGTGTCAAGTGGAAGATGGGAC...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGAGTCCCATCTTCCACTTaGCACAGGATCTTAGAAACA +
Preference number: 4 (lower is better)
Translates to: ALYNVTATLHTDVAFASGVPSST*HRILET
Trigger: TGTTTCTAAGATCCTGTGTCAAGTGGAAGATGGGAC...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGCATGGAACTCCAGTGTaGCATGGGCATCAAATCCAA +
Preference number: 4 (lower is better)
Translates to: QVCTALHQSLLISITVHLHGTPV*HGHQIQ
Trigger: TTGGATTTGATGCCCATGTCACACTGGAGTTCCATG...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGGTTCGAAATCATGGTaGTCACCTGGGTTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVGSKSW*SPGFPQ
Trigger: CTGGGGAAACCCAGGTGATCACCATGATTTCGAACC...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCGGTTCGAAATCATGGTaGTCACCTGGGTTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTGSKSW*SPGFPQ
Trigger: CTGGGGAAACCCAGGTGATCACCATGATTTCGAACC...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGTGTACCATGTTGGCCTaGTTCCTCAGGGAGATCCGA +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVCTMLA*FLREIR
Trigger: TCGGATCTCCCTGAGGAATCAGGCCAACATGGTACA...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGCAGACTGGGGATCATTaGGTAAAGGCATGGATGTTC +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQQTGDH*VKAWMF
Trigger: GAACATCCATGCCTTTACTCAATGATCCCCAGTCTG...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTCAGACTGGGGATCATTaGGTAAAGGCATGGATGTTC +
Preference number: 4 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVQTGDH*VKAWMF
Trigger: GAACATCCATGCCTTTACTCAATGATCCCCAGTCTG...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCGAGATCTTTCAGATCTaGGTCCTCATAATAGGGAGC +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSEIFQI*VLIIGS
Trigger: GCTCCCTATTATGAGGACTCAGATCTGAAAGATCTC...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR TCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGAGCCTGCAAAATTGCATaGTCTTCTGAAGAGACTGGT +
Preference number: 4 (lower is better)
Translates to: ALYNVTATLHTDVAFASGACKIA*SSEETG
Trigger: ACCAGTCTCTTCAGAAGATCATGCAATTTTGCAGGC...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGTGCTGTGCTCTTTCTTaGGGTGTCTTACCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKCCALS*GVLPLE
Trigger: CTCCAAGGGTAAGACACCTCAAGAAAGAGCACAGCA...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGGTCCTCATGGCCAATaGCCTTATAGTTCTGACGGC +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVGPHGQ*PYSSDG
Trigger: GCCGTCAGAACTATAAGGTCATTGGCCATGAGGACC...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGAACAATTCTAACTATCTaGCAGACATTTCTGGCTAGA +
Preference number: 4 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLRTILTI*QTFLAR
Trigger: TCTAGCCAGAAATGTCTGTCAGATAGTTAGAATTGT...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGCTTGGCCAAACATTTaGCTCAATCCAGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQAWPNI*LNPGNG
Trigger: TCCATTCCCTGGATTGAGTCAAATGTTTGGCCAAGC...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCGTTATATCCTTAGTATaGTGCCTGCCTCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSVISLV*CLPQSD
Trigger: GTCACTCTGAGGCAGGCATCATACTAAGGATATAAC...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GTCAGCCAAGCTAGCTGCCTCTTCAGTGCTGTCTCAGTAGGCTTTGTAGAAATGTATGCCTTTGATCTCTaGGTTAGTTGTTCAATCTTC +
Preference number: 4 (lower is better)
Translates to: VSQASCLFSAVSVGFVEMYAFDL*VSCSIF
Trigger: GAAGATTGAACAACTAACTCAGAGATCAAAGGCATA...CATTTCTACAAAGCCTACTGAGACAGCACTGAAGAGGCAGCTAGCTTGGCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGCCTCTTCTCCAGTCCTaGCTCTACATCCCAAACAAC +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWPLLQS*LYIPNN
Trigger: GTTGTTTGGGATGTAGAGTCAGGACTGGAGAAGAGG...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGAGAAACATTAGTCTACTaGTATGGGGTTAAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLRETLVY*YGVKSC
Trigger: ACAAGACTTAACCCCATATCAGTAGACTAATGTTTC...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCTTCCTGTACGAGACCTaGTTCCGGAAAGTTAAGTTC +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSFLYET*FRKVKF
Trigger: GAACTTAACTTTCCGGAAGCAGGTCTCGTACAGGAA...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGACGATTTTACAGACTaGACACTTCCTCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQDDFTD*TLPPES
Trigger: GCTCTCAGGAGGAAGTGTGCAGTCTGTAAAATCGTC...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCTTAATCTTTTCTAGCTaGTCAATGCAGGCGGTGTGG +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSLIFSS*SMQAVW
Trigger: CCACACCGCCTGCATTGAGCAGCTAGAAAAGATTAA...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGTTTTTCTAGTCCAAGATCTCTCACAATTAAAGATATGCCTTTGATCTCTGAGTTACATTTCCCCTCCTaGCGACGCCTGTGCACCCAG +
Preference number: 4 (lower is better)
Translates to: SFSSPRSLTIKDMPLISELHFPS*RRLCTQ
Trigger: CTGGGTGCACAGGCGTCGGCAGGAGGGGAAATGTAA...CTCAGAGATCAAAGGCATATCTTTAATTGTGAGAGATCTTGGACTAGAAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGAAGCCCTTACCACACTaGTTACATTTCCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWKPLPH*LHFPSC
Trigger: GCAGGAGGGGAAATGTAAGCAGTGTGGTAAGGGCTT...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGCTTTGGTTCCCTGGTTaGCTCCACTCTTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWLWFPG*LHSWDS
Trigger: TGAATCCCAAGAGTGGAGGCAACCAGGGAACCAAAG...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCCTTTGGTTCCCTGGTTaGCTCCACTCTTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVLWFPG*LHSWDS
Trigger: TGAATCCCAAGAGTGGAGGCAACCAGGGAACCAAAG...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGAGAATTTCTCTGGATTTaGTTCTCTGGATTCATGGAA +
Preference number: 4 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLREFLWI*FSGFME
Trigger: TTCCATGAATCCAGAGAAGCAAATCCAGAGAAATTC...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCGAAGTCAGAAAAAGCTaGCCCTGCATAGAACATTTT +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCEVRKS*PCIEHF
Trigger: AAAATGTTCTATGCAGGGGCAGCTTTTTCTGACTTC...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGTTCCCCAGGGCATTGTaGCAGCACAATATCTGGGTA +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWFPRAL*QHNIWV
Trigger: TACCCAGATATTGTGCTGGCACAATGCCCTGGGGAA...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGATGGATGTTCTCCTCTTaGTCTTCTGTACCATGTTGG +
Preference number: 4 (lower is better)
Translates to: ALYNVTATLHTDVAFASGWMFSS*SSVPCW
Trigger: CCAACATGGTACAGAAGAGCAAGAGGAGAACATCCA...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCATCACCAGCTATTACTaGCTGCAAAATTGCATGATC +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCITSYY*LQNCMI
Trigger: GATCATGCAATTTTGCAGGCAGTAATAGCTGGTGAT...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGCGTCTTTCTCAGAGATaGTCCTGCATCCACCAGAAG +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWRLSQR*SCIHQK
Trigger: CTTCTGGTGGATGCAGGAGCATCTCTGAGAAAGACG...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCATGCTCATGTCCTCTTTaGCCGAATACCAGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPCSCPL*PNTRVK
Trigger: TTTGACCCTGGTATTCGGGCAAAGAGGACATGAGCA...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCACACAGACATCTCCCATaGCACCTCACCATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPHRHLP*HLTIPQ
Trigger: CTGAGGAATGGTGAGGTGGCATGGGAGATGTCTGTG...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGAATTCCAATGGTGGTTTaGACTAAGGACTTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLRIPMVV*TKDFLK
Trigger: TTTCAGAAAGTCCTTAGTGCAAACCACCATTGGAAT...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGCCAGGGAATGGAAGATaGCATTCAAAGCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: QVCTALHQSLLISITVHLPGNGR*HSKPDS
Trigger: GGAATCTGGCTTTGAATGGCATCTTCCATTCCCTGG...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGCAGCACAGGCAGATCTaGCAAAGCAGCCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWQHRQI*QSSHSE
Trigger: TTCAGAATGGCTGCTTTGGCAGATCTGCCTGTGCTG...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GTCAGCCAAGCTAGCTGCCTCTTCAGTGCTGTCTCAGTAGGCTTTGTAGAAATGGTGGTTCAATTAAGATaGAGGCAGAAGCCATTTTAT +
Preference number: 4 (lower is better)
Translates to: VSQASCLFSAVSVGFVEMVVQLR*RQKPFY
Trigger: ATAAAATGGCTTCTGCCTGCATCTTAATTGAACCAC...CATTTCTACAAAGCCTACTGAGACAGCACTGAAGAGGCAGCTAGCTTGGCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGTTCAGGGACAGGACTaGCGCTATGGCCCAAAACTT +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVVQGQD*RYGPKL
Trigger: AAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAAC...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCAGTTCAGGGACAGGACTaGCGCTATGGCCCAAAACTT +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPVQGQD*RYGPKL
Trigger: AAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAAC...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GTCAGCCAAGCTAGCTGCCTCTTCAGTGCTGTCTCAGTAGGCTTTGTAGAAATGGTCTTTTCTTCTAGATaGCAGCTTCATGAAATCAAG +
Preference number: 4 (lower is better)
Translates to: VSQASCLFSAVSVGFVEMVFSSR*QLHEIK
Trigger: CTTGATTTCATGAAGCTGGCATCTAGAAGAAAAGAC...CATTTCTACAAAGCCTACTGAGACAGCACTGAAGAGGCAGCTAGCTTGGCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCGGGGTTCTCCTGCACTaGACTTATCACATTGGAATT +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSGVLLH*TYHIGI
Trigger: AATTCCAATGTGATAAGTGCAGTGCAGGAGAACCCC...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGTACAGATGTAGCCTTTaGGAGTGGAATACCCACAGC +
Preference number: 4 (lower is better)
Translates to: QVCTALHQSLLISITVHLYRCSL*EWNTHS
Trigger: GCTGTGGGTATTCCACTCGCAAAGGCTACATCTGTA...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGTTTTTCTAGTCCAAGATCTCTCACAATTAAAGATATGCCTTTGATCTCTGAGTCGCTCTGGGCTCCTTaGCTGGACCATTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: SFSSPRSLTIKDMPLISESLWAP*LDHLPQ
Trigger: CTGTGGCAAATGGTCCAGCCAAGGAGCCCAGAGCGA...CTCAGAGATCAAAGGCATATCTTTAATTGTGAGAGATCTTGGACTAGAAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614521.2
CDS-3UTR CCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGACATCTGCAGGACTTTaGTTCCCTGGTTGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVTSAGL*FPGCLH
Trigger: GTGGAGGCAACCAGGGAACCAAAGTCCTGCAGATGT...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGGGGTTTCTTTCCACATaGAGGTTCCAGCGATCTAGC +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKGFLST*RFQRSS
Trigger: GCTAGATCGCTGGAACCTCCATGTGGAAAGAAACCC...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCATCTTCAAGTTCTTCTaGAGGCAAGTCGGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSIFKFF*RQVGVS
Trigger: AGAAACCCCGACTTGCCTCCAGAAGAACTTGAAGAT...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGCTTCTCTGGATTCATaGAACTCCAGTGTGACATGG +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQASLDS*NSSVTW
Trigger: CCATGTCACACTGGAGTTCCATGAATCCAGAGAAGC...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGATGACTTCTCGACACTaGTGTAGCCTCTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKMTSRH*CSLSPW
Trigger: CCATGGAGAGAGGCTACACCAGTGTCGAGAAGTCAT...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGTCTTCTGTACCATGTTaGCCTGATTCCTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQSSVPC*PDSSGR
Trigger: TCTCCCTGAGGAATCAGGCCAACATGGTACAGAAGA...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGGATCCTCAGACGATCTaGGACAGACTGGGGATCATT +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKDPQTI*DRLGII
Trigger: AATGATCCCCAGTCTGTCCCAGATCGTCTGAGGATC...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGTGCATAGGGGGAGGATaGAGCAGTGCCATTTATACG +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWCIGGG*SSAIYT
Trigger: CGTATAAATGGCACTGCTCCATCCTCCCCCTATGCA...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCAGCAAAAGGCAAAGATaGCTACACATAGGCAGTACG +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSSKRQR*LHIGST
Trigger: CGTACTGCCTATGTGTAGCCATCTTTGCCTTTTGCT...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCCTGCTCACTTTATTTTaGAAATCCCAAGTCCTAGTG +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCLLTLF*KSQVLV
Trigger: CACTAGGACTTGGGATTTCCAAAATAAAGTGAGCAG...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCGATGATCAAGGTCAGTaGACATCCATGTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSDDQGQ*TSMCPL
Trigger: CAAAGGACACATGGATGTCCACTGACCTTGATCATC...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGACTAAAGACCCAGTTCTaGCTGCAGCACTATCATTTG +
Preference number: 4 (lower is better)
Translates to: ALYNVTATLHTDVAFASGLKTQF*LQHYHL
Trigger: CAAATGATAGTGCTGCAGCCAGAACTGGGTCTTTAG...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGCCAACCAATGATGGGTaGGGAGAGTGGCGAATAAAA +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQPTNDG*GEWRIK
Trigger: TTTTATTCGCCACTCTCCCCACCCATCATTGGTTGG...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGTCTCCTTCCCCAGGATaGCAAGAATCCAAACTTTCC +
Preference number: 4 (lower is better)
Translates to: QVCTALHQSLLISITVHLSPSPG*QESKLS
Trigger: GGAAAGTTTGGATTCTTGCCATCCTGGGGAAGGAGA...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCAAGCTTTGCAAAAGCATaGCTCTGGGATGTGATAGGG +
Preference number: 4 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPSFAKA*LWDVIG
Trigger: CCCTATCACATCCCAGAGCCATGCTTTTGCAAAGCT...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CAA 72 bp CCCTTAAAAGCTAGTGGCATGGTCTCAGGTAGATTCTaGCAGGAGAGAGACAGATATATGAATTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: PLKASGMVSGRF*QERDRYMNSIS
Trigger: GCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACCTGAGACCATGCCACTAGCTTTTAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGCTGATTTTGCAAATCTaGCTTGGCAGTTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQLILQI*LGSSPL
Trigger: GAGAGGAGAACTGCCAAGTCAGATTTGCAAAATCAG...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTCTGATTTTGCAAATCTaGCTTGGCAGTTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVLILQI*LGSSPL
Trigger: GAGAGGAGAACTGCCAAGTCAGATTTGCAAAATCAG...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTCAATGTGATGCAGCATaGAGCAGGTCACCTTATTGT +
Preference number: 4 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVQCDAA*SRSPYC
Trigger: ACAATAAGGTGACCTGCTTCATGCTGCATCACATTG...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCACAGGGTTCTTCAATGTaGTGCAGCATGAAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPQGSSM*CSMKQV
Trigger: GACCTGCTTCATGCTGCATCACATTGAAGAACCCTG...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGGATTCAGGTACCACATaGACATCTGCAGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKDSGTT*TSAGLW
Trigger: CCAAAGTCCTGCAGATGTTCATGTGGTACCTGAATC...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGTCCCATCTTCCACTTaGCACAGGATCTTAGAAACA +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQVPSST*HRILET
Trigger: TGTTTCTAAGATCCTGTGTCAAGTGGAAGATGGGAC...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGTGGAACTTCAGTTCCTaGATCTTTGGGGTGAGATCT +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQWNFSS*IFGVRS
Trigger: AGATCTCACCCCAAAGATTCAGGAACTGAAGTTCCA...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCCATAGTCTTGTAAACTaGTTTTGTTCACCCGGATCC +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSHSLVN*FCSPGS
Trigger: GGATCCGGGTGAACAAAATCAGTTTACAAGACTATG...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGAGATCTTTCAGATCTaGGTCCTCATAATAGGGAGC +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQEIFQI*VLIIGS
Trigger: GCTCCCTATTATGAGGACTCAGATCTGAAAGATCTC...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR TCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCAGAGATCTTTCAGATCTaGGTCCTCATAATAGGGAGC +
Preference number: 4 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPEIFQI*VLIIGS
Trigger: GCTCCCTATTATGAGGACTCAGATCTGAAAGATCTC...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614521.2
CDS-3UTR TCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGCCTGCAAAATTGCATaGTCTTCTGAAGAGACTGGT +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQACKIA*SSEETG
Trigger: ACCAGTCTCTTCAGAAGATCATGCAATTTTGCAGGC...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTGCCTGCAAAATTGCATaGTCTTCTGAAGAGACTGGT +
Preference number: 4 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVACKIA*SSEETG
Trigger: ACCAGTCTCTTCAGAAGATCATGCAATTTTGCAGGC...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCCCAGCAAAAGCCCAGTaGTTAAATTCTCCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVPAKAQ*LNSPGA
Trigger: TGCTCCAGGAGAATTTAATCACTGGGCTTTTGCTGG...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCGCTTGGCCAAACATTTaGCTCAATCCAGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVAWPNI*LNPGNG
Trigger: TCCATTCCCTGGATTGAGTCAAATGTTTGGCCAAGC...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTCAGAGTGAAAGGAGTTaGGAGATTCAAAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVQSERS*EIQRWF
Trigger: GAACCACCTTTGAATCTCTCAACTCCTTTCACTCTG...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCGCTTACATTGTTGAATaGGGAAGCAGCAGCCGTGAT +
Preference number: 4 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVAYIVE*GSSSRD
Trigger: ATCACGGCTGCTGCTTCCTCATTCAACAATGTAAGC...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGTGTGGCTTACATTGTTaGATGAGGAAGCAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVCGLHC*MRKQQP
Trigger: CGGCTGCTGCTTCCTCATTCAACAATGTAAGCCACA...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCAGAACTATGTACAAGCTaGCAAGCCTCTCTCCGACAG +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPELCTS*QASLRQ
Trigger: CTGTCGGAGAGAGGCTTGTCAGCTTGTACATAGTTC...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCACTTTGGTTCCCTGGTTaGCTCCACTCTTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPLWFPG*LHSWDS
Trigger: TGAATCCCAAGAGTGGAGGCAACCAGGGAACCAAAG...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCGAATTTCTCTGGATTTaGTTCTCTGGATTCATGGAA +
Preference number: 4 (lower is better)
Translates to: LQERDRYMNSISFFQGSCEFLWI*FSGFME
Trigger: TTCCATGAATCCAGAGAAGCAAATCCAGAGAAATTC...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCATTCCCCAGGGCATTGTaGCAGCACAATATCTGGGTA +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPFPRAL*QHNIWV
Trigger: TACCCAGATATTGTGCTGGCACAATGCCCTGGGGAA...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGAATCTCCAGGTATCCTaGCTCCTTCTCAATGGGCTA +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKNLQVS*LLLNGL
Trigger: TAGCCCATTGAGAAGGAGGCAGGATACCTGGAGATT...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATCACAGACATCTCCCATaGCACCTCACCATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VRESIKVLLALEIMLVCNHRHLP*HLTIPQ
Trigger: CTGAGGAATGGTGAGGTGGCATGGGAGATGTCTGTG...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGAAGCTGAACCAGTCCTaGATGGCTATTGGCTACAGC +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVKLNQS*MAIGYS
Trigger: GCTGTAGCCAATAGCCATGCAGGACTGGTTCAGCTT...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CTCCTAGACCATAAGGCCTTAGCTCTTTCCAAAGCCCAGGACCAATTTTTAAAAAAAATTGAGTGGTTCTaGAAACTAGCTGTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LLDHKALALSKAQDQFLKKIEWF*KLAVGL
Trigger: GAGGCCCACAGCTAGTTTGCAGAACCACTCAATTTT...TTTTAAAAATTGGTCCTGGGCTTTGGAAAGAGCTAAGGCCTTATGGTCTAGGAG
43% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCAACCAGAACAAAGGGATaGCTTGACTGTGGATGTGAT +
Preference number: 4 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPTRTKG*LDCGCD
Trigger: ATCACATCCACAGTCAAGGCATCCCTTTGTTCTGGT...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGTTTATGGATTCCACCTaGCAGCTGGCAGCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKFMDST*QLAALQ
Trigger: TTGCAAAGCTGCCAGCTGGCAGGTGGAATCCATAAA...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGTTTTTCTAGTCCAAGATCTCTCACAATTAAAGATATGCCTTTGATCTCTGAGTCTGGGCTCCTTGGCTaGACCATTTGCCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: SFSSPRSLTIKDMPLISESGLLG*TICHRK
Trigger: CTTCCTGTGGCAAATGGTCCAGCCAAGGAGCCCAGA...CTCAGAGATCAAAGGCATATCTTTAATTGTGAGAGATCTTGGACTAGAAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614521.2
CDS-3UTR CCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGTCAATGCAGGCGGTGTaGACGACGATTTTACAGACT +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKSMQAV*TTILQT
Trigger: AGTCTGTAAAATCGTCGTCCACACCGCCTGCATTGA...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGAAGGAGAACTTTTGCTaGAAGCCCTTACCACACTGC +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWKENFC*KPLPHC
Trigger: GCAGTGTGGTAAGGGCTTCCAGCAAAAGTTCTCCTT...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGAAGGAGAACTTTTGCTaGAAGCCCTTACCACACTGC +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKKENFC*KPLPHC
Trigger: GCAGTGTGGTAAGGGCTTCCAGCAAAAGTTCTCCTT...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGATCTTCAAGTTCTTCTaGAGGCAAGTCGGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: QVCTALHQSLLISITVHLIFKFF*RQVGVS
Trigger: AGAAACCCCGACTTGCCTCCAGAAGAACTTGAAGAT...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGGCTTCTCTGGATTCATaGAACTCCAGTGTGACATGG +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWASLDS*NSSVTW
Trigger: CCATGTCACACTGGAGTTCCATGAATCCAGAGAAGC...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCAATCATGGTGATCACCTaGGTTTCCCCAGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPIMVIT*VSPGHC
Trigger: ACAATGCCCTGGGGAAACCCAGGTGATCACCATGAT...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGATCCTCAGACGATCTaGGACAGACTGGGGATCATT +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVDPQTI*DRLGII
Trigger: AATGATCCCCAGTCTGTCCCAGATCGTCTGAGGATC...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCCTAGTTCCCCAGCAATaGTTCTTAACCAGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSLVPQQ*FLTSLK
Trigger: TTTCAGACTGGTTAAGAACCATTGCTGGGGAACTAG...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288490.9
ENST00000453654.6
CDS-3UTR CCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCATGTAGCACGCGGGAGTaGCTGAGATCTTTCAGATCT +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPCSTRE*LRSFRS
Trigger: AGATCTGAAAGATCTCAGCCACTCCCGCGTGCTACA...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGAGGTGTCTTACCCTTaGAGTCCGTCTTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVEVSYP*SPSFSE
Trigger: CTCTGAGAAAGACGGACTCCAAGGGTAAGACACCTC...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGATCTGACAGACATTTCTaGCTAGATTCCAATGGTGGT +
Preference number: 4 (lower is better)
Translates to: ALYNVTATLHTDVAFASGSDRHF*LDSNGG
Trigger: ACCACCATTGGAATCTAGCCAGAAATGTCTGTCAGA...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTACTCAATCCAGGGAATaGAAGATGCCATTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVTQSRE*KMPFKA
Trigger: GGCTTTGAATGGCATCTTCCATTCCCTGGATTGAGT...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CTCAAATCACATATTCCTAATCACAACACCCCTCAGAGTGGTCAGGTATCCTCTTTGTGCATGAACGGATaGGGTATTTCTGACATCACA +
Preference number: 4 (lower is better)
Translates to: LKSHIPNHNTPQSGQVSSLCMNG*GISDIT
Trigger: TGTGATGTCAGAAATACCCCATCCGTTCATGCACAA...AGAGGATACCTGACCACTCTGAGGGGTGTTGTGATTAGGAATATGTGATTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCAATTAGCTACTCCTTCTaGAAGGAAGACAAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPISYSF*KEDKLL
Trigger: GAGCAGCTTGTCTTCCTTCCAGAAGGAGTAGCTAAT...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CTCCTAGACCATAAGGCCTTAGCTCTTTCCAAAGCCCAGGACCAATTTTTAAAAGAACCAAAACATTGCTaGCTAATGAGTGGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: LLDHKALALSKAQDQFLKEPKHC*LMSGWY
Trigger: GTACCAGCCACTCATTAGCCAGCAATGTTTTGGTTC...TTTTAAAAATTGGTCCTGGGCTTTGGAAAGAGCTAAGGCCTTATGGTCTAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTGAACCAAAACATTGCTaGCTAATGAGTGGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVEPKHC*LMSGWY
Trigger: GTACCAGCCACTCATTAGCCAGCAATGTTTTGGTTC...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGACATTATTCACCTCGTTaGGGTTGTTTTGAACCCCAA +
Preference number: 4 (lower is better)
Translates to: ALYNVTATLHTDVAFASGHYSPR*GCFEPQ
Trigger: TTGGGGTTCAAAACAACCCCAACGAGGTGAATAATG...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CTCCTAGACCATAAGGCCTTAGCTCTTTCCAAAGCCCAGGACCAATTTTTAAAATCATTGCTATCTAGTTaGCAGGAACCTGGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: LLDHKALALSKAQDQFLKSLLSS*QEPGGK
Trigger: TTTTCCCCCAGGTTCCTGCCAACTAGATAGCAATGA...TTTTAAAAATTGGTCCTGGGCTTTGGAAAGAGCTAAGGCCTTATGGTCTAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GTCAGCCAAGCTAGCTGCCTCTTCAGTGCTGTCTCAGTAGGCTTTGTAGAAATGAGGAGATTTGGGAATTaGCTAACAATTGGCAAAATT +
Preference number: 4 (lower is better)
Translates to: VSQASCLFSAVSVGFVEMRRFGN*LTIGKI
Trigger: AATTTTGCCAATTGTTAGCCAATTCCCAAATCTCCT...CATTTCTACAAAGCCTACTGAGACAGCACTGAAGAGGCAGCTAGCTTGGCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CAA 72 bp TTTCTAAAGACCCAGTTCTGGCTGCAGCACTATCATTaGCTATATGAATCTGCACAGGCTGAATTCACTGCT +
Preference number: 4 (lower is better)
Translates to: FLKTQFWLQHYH*LYESAQAEFTA
Trigger: AGCAGTGAATTCAGCCTGTGCAGATTCATATAGCAAATGATAGTGCTGCAGCCAGAACTGGGTCTTTAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGCTGCACACTTCCTCCTaGGAGCTGATTTTGCAAATC +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVLHTSS*ELILQI
Trigger: GATTTGCAAAATCAGCTCTCAGGAGGAAGTGTGCAG...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGCAATGTGATGCAGCATaGAGCAGGTCACCTTATTGT +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKQCDAA*SRSPYC
Trigger: ACAATAAGGTGACCTGCTTCATGCTGCATCACATTG...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGATTCAGGTACCACATaGACATCTGCAGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVDSGTT*TSAGLW
Trigger: CCAAAGTCCTGCAGATGTTCATGTGGTACCTGAATC...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGGTCCCATCTTCCACTTaGCACAGGATCTTAGAAACA +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKVPSST*HRILET
Trigger: TGTTTCTAAGATCCTGTGTCAAGTGGAAGATGGGAC...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGCATGGAACTCCAGTGTaGCATGGGCATCAAATCCAA +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVHGTPV*HGHQIQ
Trigger: TTGGATTTGATGCCCATGTCACACTGGAGTTCCATG...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGTGGAACTTCAGTTCCTaGATCTTTGGGGTGAGATCT +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKWNFSS*IFGVRS
Trigger: AGATCTCACCCCAAAGATTCAGGAACTGAAGTTCCA...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CTCCTAGACCATAAGGCCTTAGCTCTTTCCAAAGCCCAGGACCAATTTTTAAAATGTAAGTTAGAAGCATaGCTTCTCGACACTGGTGTA +
Preference number: 4 (lower is better)
Translates to: LLDHKALALSKAQDQFLKCKLEA*LLDTGV
Trigger: TACACCAGTGTCGAGAAGTCATGCTTCTAACTTACA...TTTTAAAAATTGGTCCTGGGCTTTGGAAAGAGCTAAGGCCTTATGGTCTAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCACAGACTGGGGATCATTaGGTAAAGGCATGGATGTTC +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPQTGDH*VKAWMF
Trigger: GAACATCCATGCCTTTACTCAATGATCCCCAGTCTG...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGGCAACATAAACAATTACAGGAACTCTTGGTCATGAATTTTATGACACAGGTAGGTCCTCATGGCCAATaGCCTTATAGTTCTGACGGC +
Preference number: 4 (lower is better)
Translates to: RQHKQLQELLVMNFMTQVGPHGQ*PYSSDG
Trigger: GCCGTCAGAACTATAAGGTCATTGGCCATGAGGACC...TACCTGTGTCATAAAATTCATGACCAAGAGTTCCTGTAATTGTTTATGTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCTGTGCAACATTCCAATaGCTGTTTCCTATTTCAGTG +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSCATFQ*LFPISV
Trigger: CACTGAAATAGGAAACAGTCATTGGAATGTTGCACA...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGCGGATGGGGTATTTCTaGCATCACATACAAGCAACA +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWRMGYF*HHIQAT
Trigger: TGTTGCTTGTATGTGATGTCAGAAATACCCCATCCG...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCCGGATGGGGTATTTCTaGCATCACATACAAGCAACA +
Preference number: 4 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVRMGYF*HHIQAT
Trigger: TGTTGCTTGTATGTGATGTCAGAAATACCCCATCCG...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGCTTACATTGTTGAATaGGGAAGCAGCAGCCGTGAT +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVAYIVE*GSSSRD
Trigger: ATCACGGCTGCTGCTTCCTCATTCAACAATGTAAGC...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATTGTGGCTTACATTGTTaGATGAGGAAGCAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: VRESIKVLLALEIMLVCNCGLHC*MRKQQP
Trigger: CGGCTGCTGCTTCCTCATTCAACAATGTAAGCCACA...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CTCCTAGACCATAAGGCCTTAGCTCTTTCCAAAGCCCAGGACCAATTTTTAAAACCACTTCGTATTATCTaGATCCTCCTTTACCTGGAA +
Preference number: 4 (lower is better)
Translates to: LLDHKALALSKAQDQFLKPLRII*ILLYLE
Trigger: TTCCAGGTAAAGGAGGATTCAGATAATACGAAGTGG...TTTTAAAAATTGGTCCTGGGCTTTGGAAAGAGCTAAGGCCTTATGGTCTAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGTTAATCTTTTCTAGCTaGTCAATGCAGGCGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKLIFSS*SMQAVW
Trigger: CCACACCGCCTGCATTGAGCAGCTAGAAAAGATTAA...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCATACCACATGAACATCTaGAGGACTTTGGTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPYHMNI*RTLVPW
Trigger: CCAGGGAACCAAAGTCCTGCAGATGTTCATGTGGTA...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CTCAAATCACATATTCCTAATCACAACACCCCTCAGAGTGGTCAGGTATCCTCTGAAGTCAGAAAAAGCTaGCCCTGCATAGAACATTTT +
Preference number: 4 (lower is better)
Translates to: LKSHIPNHNTPQSGQVSSEVRKS*PCIEHF
Trigger: AAAATGTTCTATGCAGGGGCAGCTTTTTCTGACTTC...AGAGGATACCTGACCACTCTGAGGGGTGTTGTGATTAGGAATATGTGATTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGTGCTCATGTCCTCTTTaGCCGAATACCAGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVCSCPL*PNTRVK
Trigger: TTTGACCCTGGTATTCGGGCAAAGAGGACATGAGCA...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCACTTCTGGAAACAATCTaGTGCAGTGTCTCCTGTAAT +
Preference number: 4 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPLLETI*CSVSCN
Trigger: ATTACAGGAGACACTGCAGCAGATTGTTTCCAGAAG...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGGCAACATAAACAATTACAGGAACTCTTGGTCATGAATTTTATGACACAGGTAGTCAGCCAAGCTAGCTaGCTCTTCAGTGCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: RQHKQLQELLVMNFMTQVVSQAS*LFSAVS
Trigger: TGAGACAGCACTGAAGAGGCAGCTAGCTTGGCTGAC...TACCTGTGTCATAAAATTCATGACCAAGAGTTCCTGTAATTGTTTATGTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCGGGGTTCTCCTGCACTaGACTTATCACATTGGAATT +
Preference number: 4 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVGVLLH*TYHIGI
Trigger: AATTCCAATGTGATAAGTGCAGTGCAGGAGAACCCC...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CTCAAATCACATATTCCTAATCACAACACCCCTCAGAGTGGTCAGGTATCCTCTTGCAGCACTATCATTTaGTATATGAATCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: LKSHIPNHNTPQSGQVSSCSTII*YMNLHR
Trigger: CCTGTGCAGATTCATATAGCAAATGATAGTGCTGCA...AGAGGATACCTGACCACTCTGAGGGGTGTTGTGATTAGGAATATGTGATTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCCAAAGTTATAGAAAGTaGCTCCATGCCTCTGTATTG +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSQSYRK*LHASVL
Trigger: CAATACAGAGGCATGGAGGCACTTTCTATAACTTTG...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CTCAAATCACATATTCCTAATCACAACACCCCTCAGAGTGGTCAGGTATCCTCTCAAAGTTATAGAAAGTaGCTCCATGCCTCTGTATTG +
Preference number: 4 (lower is better)
Translates to: LKSHIPNHNTPQSGQVSSQSYRK*LHASVL
Trigger: CAATACAGAGGCATGGAGGCACTTTCTATAACTTTG...AGAGGATACCTGACCACTCTGAGGGGTGTTGTGATTAGGAATATGTGATTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CTCCTAGACCATAAGGCCTTAGCTCTTTCCAAAGCCCAGGACCAATTTTTAAAAGAAGCAGGTCTTTTCTaGAAGACTCTGGATATGGAT +
Preference number: 4 (lower is better)
Translates to: LLDHKALALSKAQDQFLKEAGLF*KTLDMD
Trigger: ATCCATATCCAGAGTCTTGCAGAAAAGACCTGCTTC...TTTTAAAAATTGGTCCTGGGCTTTGGAAAGAGCTAAGGCCTTATGGTCTAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATCTTTCCTCACAACTCTaGCCCTCTTTTATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VRESIKVLLALEIMLVCNLSSQL*PSFMPP
Trigger: TGGGGGCATAAAAGAGGGGCAGAGTTGTGAGGAAAG...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCTACAGATGTAGCCTTTaGGAGTGGAATACCCACAGC +
Preference number: 4 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTYRCSL*EWNTHS
Trigger: GCTGTGGGTATTCCACTCGCAAAGGCTACATCTGTA...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGTTCTACTGCCACAGCTaGTACTTGTTTATGGATTCC +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQFYCHS*YLFMDS
Trigger: GGAATCCATAAACAAGTAGCAGCTGTGGCAGTAGAA...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGGCAACATAAACAATTACAGGAACTCTTGGTCATGAATTTTATGACACAGGTAACATCTGCAGGACTTTaGTTCCCTGGTTGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: RQHKQLQELLVMNFMTQVTSAGL*FPGCLH
Trigger: GTGGAGGCAACCAGGGAACCAAAGTCCTGCAGATGT...TACCTGTGTCATAAAATTCATGACCAAGAGTTCCTGTAATTGTTTATGTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGTTCAAGCGCATCTTTTaGCCCTTCCTGAGAAAGATC +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKFKRIF*PFLRKI
Trigger: GATCTTTCTCAGGAAGGGCCAAAAGATGCGCTTGAA...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCAACTCCAGTGTGACATaGGCATCAAATCCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTNSSVT*ASNPRL
Trigger: CAGCCTTGGATTTGATGCCCATGTCACACTGGAGTT...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATATGACTTCTCGACACTaGTGTAGCCTCTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: VRESIKVLLALEIMLVCNMTSRH*CSLSPW
Trigger: CCATGGAGAGAGGCTACACCAGTGTCGAGAAGTCAT...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCATCTTCTGTACCATGTTaGCCTGATTCCTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPSSVPC*PDSSGR
Trigger: TCTCCCTGAGGAATCAGGCCAACATGGTACAGAAGA...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCAAACTCGGAAGGTCCGTaGTCAAGGATATATTTCACA +
Preference number: 4 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPNSEGP*SRIYFT
Trigger: TGTGAAATATATCCTTGACCACGGACCTTCCGAGTT...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGAACTCGGAAGGTCCGTaGTCAAGGATATATTTCACA +
Preference number: 4 (lower is better)
Translates to: QVCTALHQSLLISITVHLNSEGP*SRIYFT
Trigger: TGTGAAATATATCCTTGACCACGGACCTTCCGAGTT...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTACAAGCCTTTGTTCTTaGGTCAAGGATTACTTGGAG +
Preference number: 4 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVTSLCS*VKDYLE
Trigger: CTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGT...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCAACCGTATTTATTTTTaGGAAGTGGGACACAACACC +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSNRIYF*EVGHNT
Trigger: GGTGTTGTGTCCCACTTCCCAAAAATAAATACGGTT...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGCCTGTCTTTGCCTACTaGTGTTCACTAGACATATAC +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQPVFAY*CSLDIY
Trigger: GTATATGTCTAGTGAACACCAGTAGGCAAAGACAGG...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGAACAGCCTTGTAAAGTaGTGTAAGCATCACAGAGGA +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQNSLVK*CKHHRG
Trigger: TCCTCTGTGATGCTTACACCACTTTACAAGGCTGTT...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCAAACAGCCTTGTAAAGTaGTGTAAGCATCACAGAGGA +
Preference number: 4 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPNSLVK*CKHHRG
Trigger: TCCTCTGTGATGCTTACACCACTTTACAAGGCTGTT...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGAATCCCAAACAACAAATaGGTAGTAAGTAGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: ALYNVTATLHTDVAFASGIPNNK*VVSRGK
Trigger: CTTTCCCCTACTTACTACCCATTTGTTGTTTGGGAT...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CAA 72 bp GATCTCCAGAAGATCAGGAGATCAGGAGCCATTTGGTaGCATATAGAAGGTACAACAAATATCAAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: DLQKIRRSGAIW*HIEGTTNIKAR
Trigger: TCTAGCCTTGATATTTGTTGTACCTTCTATATGCAACCAAATGGCTCCTGATCTCCTGATCTTCTGGAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATCTGCACACTTCCTCCTaGGAGCTGATTTTGCAAATC +
Preference number: 4 (lower is better)
Translates to: VRESIKVLLALEIMLVCNLHTSS*ELILQI
Trigger: GATTTGCAAAATCAGCTCTCAGGAGGAAGTGTGCAG...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCCAATGTGATGCAGCATaGAGCAGGTCACCTTATTGT +
Preference number: 4 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTQCDAA*SRSPYC
Trigger: ACAATAAGGTGACCTGCTTCATGCTGCATCACATTG...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCATGGAACTTCAGTTCCTaGATCTTTGGGGTGAGATCT +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPWNFSS*IFGVRS
Trigger: AGATCTCACCCCAAAGATTCAGGAACTGAAGTTCCA...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCAGAGATCTTTCAGATCTaGGTCCTCATAATAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPEIFQI*VLIIGS
Trigger: GCTCCCTATTATGAGGACTCAGATCTGAAAGATCTC...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR TCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGCCTGCAAAATTGCATaGTCTTCTGAAGAGACTGGT +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVACKIA*SSEETG
Trigger: ACCAGTCTCTTCAGAAGATCATGCAATTTTGCAGGC...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCATGTGCAACATTCCAATaGCTGTTTCCTATTTCAGTG +
Preference number: 4 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPCATFQ*LFPISV
Trigger: CACTGAAATAGGAAACAGTCATTGGAATGTTGCACA...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGTACGACCTTTGGACCTaGCAAATAATAGTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQYDLWT*QIIVEA
Trigger: TGCTTCAACTATTATTTGTCAGGTCCAAAGGTCGTA...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGAATAAGCTTGCAAAAATaGCTACCTTTCAGGTTACAG +
Preference number: 4 (lower is better)
Translates to: ALYNVTATLHTDVAFASGISLQK*LPFRLQ
Trigger: CTGTAACCTGAAAGGTAGTCATTTTTGCAAGCTTAT...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCCAGAGTGAAAGGAGTTaGGAGATTCAAAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTQSERS*EIQRWF
Trigger: GAACCACCTTTGAATCTCTCAACTCCTTTCACTCTG...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGATATGCCTTTGATCTCTaGGTTAGTTGTTCAATCTTC +
Preference number: 4 (lower is better)
Translates to: ALYNVTATLHTDVAFASGYAFDL*VSCSIF
Trigger: GAAGATTGAACAACTAACTCAGAGATCAAAGGCATA...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGAAAAAATAGGGTAAACTaGCAGGACTATCCTATCTGT +
Preference number: 4 (lower is better)
Translates to: ALYNVTATLHTDVAFASGKNRVN*QDYPIC
Trigger: ACAGATAGGATAGTCCTGTCAGTTTACCCTATTTTT...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGTTCCTGTACGAGACCTaGTTCCGGAAAGTTAAGTTC +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVFLYET*FRKVKF
Trigger: GAACTTAACTTTCCGGAAGCAGGTCTCGTACAGGAA...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR GCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCATTAATCTTTTCTAGCTaGTCAATGCAGGCGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPLIFSS*SMQAVW
Trigger: CCACACCGCCTGCATTGAGCAGCTAGAAAAGATTAA...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGTTTTTCTAGTCCAAGATCTCTCACAATTAAAGATATGCCTTTGATCTCTGAGAAGCCCTTACCACACTaGTTACATTTCCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SFSSPRSLTIKDMPLISEKPLPH*LHFPSC
Trigger: GCAGGAGGGGAAATGTAAGCAGTGTGGTAAGGGCTT...CTCAGAGATCAAAGGCATATCTTTAATTGTGAGAGATCTTGGACTAGAAAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGAAAGATCAAAGACTTaGCGTGGATTCAGGTACCAC +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVERSKT*RGFRYH
Trigger: GTGGTACCTGAATCCACGGCAAGTCTTTGATCTTTC...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CTCCTAGACCATAAGGCCTTAGCTCTTTCCAAAGCCCAGGACCAATTTTTAAAAGAAGTCAGAAAAAGCTaGCCCTGCATAGAACATTTT +
Preference number: 4 (lower is better)
Translates to: LLDHKALALSKAQDQFLKEVRKS*PCIEHF
Trigger: AAAATGTTCTATGCAGGGGCAGCTTTTTCTGACTTC...TTTTAAAAATTGGTCCTGGGCTTTGGAAAGAGCTAAGGCCTTATGGTCTAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCATGGATGTTCTCCTCTTaGTCTTCTGTACCATGTTGG +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPWMFSS*SSVPCW
Trigger: CCAACATGGTACAGAAGAGCAAGAGGAGAACATCCA...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGATTCTGTACGAGACCTaGTTCCGGAAAGTTAAGTTC +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKILYET*FRKVKF
Trigger: GAACTTAACTTTCCGGAAGCAGGTCTCGTACAGAAT...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453654.6
CDS-3UTR GCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGTCGACAGAGACTATTTaGTCTAGGGGTGCAGATTCT +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVSTETI*SRGADS
Trigger: AGAATCTGCACCCCTAGAGCAAATAGTCTCTGTCGA...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453654.6
CDS-3UTR GCA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGAATTCCAATGGTGGTTTaGACTAAGGACTTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: ALYNVTATLHTDVAFASGIPMVV*TKDFLK
Trigger: TTTCAGAAAGTCCTTAGTGCAAACCACCATTGGAAT...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CTCAAATCACATATTCCTAATCACAACACCCCTCAGAGTGGTCAGGTATCCTCTATTAGGGAAGCACTATaGTATGTCCAAGGACAAAAT +
Preference number: 4 (lower is better)
Translates to: LKSHIPNHNTPQSGQVSSIREAL*YVQGQN
Trigger: ATTTTGTCCTTGGACATAGCATAGTGCTTCCCTAAT...AGAGGATACCTGACCACTCTGAGGGGTGTTGTGATTAGGAATATGTGATTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGCTGGAAACAATCTGCTaGAGTGTCTCCTGTAATATC +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKLETIC*SVSCNI
Trigger: GATATTACAGGAGACACTGCAGCAGATTGTTTCCAG...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCATGTTTAACCTGTCTTTaGCTACTGGTGTTCACTAGA +
Preference number: 4 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPCLTCL*LLVFTR
Trigger: TCTAGTGAACACCAGTAGGCAAAGACAGGTTAAACA...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGACAATCTCTTTACTGTaGAAGGAGAACTTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQTISLL*KENFCW
Trigger: CCAGCAAAAGTTCTCCTTCCACAGTAAAGAGATTGT...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGATCAAAGACTTGCCGTaGATTCAGGTACCACATGAA +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWIKDLP*IQVPHE
Trigger: TTCATGTGGTACCTGAATCCACGGCAAGTCTTTGAT...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCATTCAAGCGCATCTTTTaGCCCTTCCTGAGAAAGATC +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPFKRIF*PFLRKI
Trigger: GATCTTTCTCAGGAAGGGCCAAAAGATGCGCTTGAA...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGATCTTCAAGTTCTTCTaGAGGCAAGTCGGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVIFKFF*RQVGVS
Trigger: AGAAACCCCGACTTGCCTCCAGAAGAACTTGAAGAT...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCAATCTTCAAGTTCTTCTaGAGGCAAGTCGGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPIFKFF*RQVGVS
Trigger: AGAAACCCCGACTTGCCTCCAGAAGAACTTGAAGAT...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGAACTCGGAAGGTCCGTaGTCAAGGATATATTTCACA +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKNSEGP*SRIYFT
Trigger: TGTGAAATATATCCTTGACCACGGACCTTCCGAGTT...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGCTTCAGACAATCTTGTaGTCTTCCAAGACTGAATGT +
Preference number: 4 (lower is better)
Translates to: QVCTALHQSLLISITVHLLQTIL*SSKTEC
Trigger: ACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAG...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGTTGACATTATCCATGTaGCACTTCCCAGCTCCTATA +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWLTLSM*HFPAPI
Trigger: TATAGGAGCTGGGAAGTGCCACATGGATAATGTCAA...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGCACTTAAAATTGAGTaGTTCTGCAAACTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQALKIE*FCKLAV
Trigger: CACAGCTAGTTTGCAGAACCACTCAATTTTAAGTGC...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGACAAGCCTTTGTTCTTaGGTCAAGGATTACTTGGAG +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKTSLCS*VKDYLE
Trigger: CTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGT...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CTCAAATCACATATTCCTAATCACAACACCCCTCAGAGTGGTCAGGTATCCTCTTTTATTTTTGGGAAGTaGGACACAACACCAGAACAA +
Preference number: 4 (lower is better)
Translates to: LKSHIPNHNTPQSGQVSSFIFGK*DTTPEQ
Trigger: TTGTTCTGGTGTTGTGTCCCACTTCCCAAAAATAAA...AGAGGATACCTGACCACTCTGAGGGGTGTTGTGATTAGGAATATGTGATTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGATTAGCTACTCCTTCTaGAAGGAAGACAAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVISYSF*KEDKLL
Trigger: GAGCAGCTTGTCTTCCTTCCAGAAGGAGTAGCTAAT...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCTGGCTAATGAGTGGCTaGTACAATAAAGCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVWLMSG*YNKALV
Trigger: AACCAAGGCTTTATTGTACCAGCCACTCATTAGCCA...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGCTAAAGACCCAGTTCTaGCTGCAGCACTATCATTTG +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVLKTQF*LQHYHL
Trigger: CAAATGATAGTGCTGCAGCCAGAACTGGGTCTTTAG...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGAGAGCAATAGAGTCTTaGATGTCAGGGCCATTTTTA +
Preference number: 4 (lower is better)
Translates to: QVCTALHQSLLISITVHLRAIES*MSGPFL
Trigger: TAAAAATGGCCCTGACATCCAAGACTCTATTGCTCT...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGTCATTGCTATCTAGTTaGCAGGAACCTGGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVSLLSS*QEPGGK
Trigger: TTTTCCCCCAGGTTCCTGCCAACTAGATAGCAATGA...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGAACCACCTCGTCCTTTaGAAAGCTCCATTAAAAAGT +
Preference number: 4 (lower is better)
Translates to: QVCTALHQSLLISITVHLNHLVL*KAPLKS
Trigger: ACTTTTTAATGGAGCTTTCCAAAGGACGAGGTGGTT...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGTTTTTCTAGTCCAAGATCTCTCACAATTAAAGATATGCCTTTGATCTCTGAGCTGCACACTTCCTCCTaGGAGCTGATTTTGCAAATC +
Preference number: 4 (lower is better)
Translates to: SFSSPRSLTIKDMPLISELHTSS*ELILQI
Trigger: GATTTGCAAAATCAGCTCTCAGGAGGAAGTGTGCAG...CTCAGAGATCAAAGGCATATCTTTAATTGTGAGAGATCTTGGACTAGAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGTGTAAGTTAGAAGCATaGCTTCTCGACACTGGTGTA +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVCKLEA*LLDTGV
Trigger: TACACCAGTGTCGAGAAGTCATGCTTCTAACTTACA...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGCCTGATGAATATCATTaGGTAAAGGCATGGATGTTC +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWPDEYH*VKAWMF
Trigger: GAACATCCATGCCTTTACTCAATGATATTCATCAGG...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424189.6
CDS-3UTR TCA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCAAGCATCCTTCTGAATaGTCCAGGCATCCCATAAAT +
Preference number: 4 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTKHPSE*SRHPIN
Trigger: ATTTATGGGATGCCTGGATCATTCAGAAGGATGCTT...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGAAGCATCCTTCTGAATaGTCCAGGCATCCCATAAAT +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVKHPSE*SRHPIN
Trigger: ATTTATGGGATGCCTGGATCATTCAGAAGGATGCTT...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCAACAATTCTAACTATCTaGCAGACATTTCTGGCTAGA +
Preference number: 4 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPTILTI*QTFLAR
Trigger: TCTAGCCAGAAATGTCTGTCAGATAGTTAGAATTGT...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGATCACTTGCTTTCCTaGTGTCCTAATAGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVDHLLS*CPNSRD
Trigger: ATCCCTACTATTAGGACATCAGGAAAGCAAGTGATC...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGATAAGCTTGCAAAAATaGCTACCTTTCAGGTTACAG +
Preference number: 4 (lower is better)
Translates to: QVCTALHQSLLISITVHLISLQK*LPFRLQ
Trigger: CTGTAACCTGAAAGGTAGTCATTTTTGCAAGCTTAT...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCACATAATTCTATAAGATaGTCAAGGTCAGTGGACATC +
Preference number: 4 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPHNSIR*SRSVDI
Trigger: GATGTCCACTGACCTTGATCATCTTATAGAATTATG...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGCTGAATTCACTGCTCTaGGATTCAGTGCATTCATCT +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVLNSLL*DSVHSS
Trigger: AGATGAATGCACTGAATCTCAGAGCAGTGAATTCAG...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCCTGAATTCACTGCTCTaGGATTCAGTGCATTCATCT +
Preference number: 4 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTLNSLL*DSVHSS
Trigger: AGATGAATGCACTGAATCTCAGAGCAGTGAATTCAG...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGAGACTTTTCTTTGCTTaGACTATGTACAAGCTGACA +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQRLFFA*TMYKLT
Trigger: TGTCAGCTTGTACATAGTTCAAGCAAAGAAAAGTCT...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGATCCCCGCTGCTAAGTaGTTTGGGATATATTTGCAA +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVIPAAK*FGIYLQ
Trigger: TTGCAAATATATCCCAAATCACTTAGCAGCGGGGAT...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCACCCTTGAAGCCACTTTaGACAAATTTAATCTTTCTG +
Preference number: 4 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPPLKPL*TNLIFL
Trigger: CAGAAAGATTAAATTTGTTCAAAGTGGCTTCAAGGG...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATAGTTCTTCTATTAGCTaGCCCTACTTCCCCCAAGTT +
Preference number: 4 (lower is better)
Translates to: VRESIKVLLALEIMLVCNSSSIS*PYFPQV
Trigger: AACTTGGGGGAAGTAGGGTCAGCTAATAGAAGAACT...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGAATTTCTCTGGATTTaGTTCTCTGGATTCATGGAA +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQEFLWI*FSGFME
Trigger: TTCCATGAATCCAGAGAAGCAAATCCAGAGAAATTC...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGGAAGTCAGAAAAAGCTaGCCCTGCATAGAACATTTT +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWEVRKS*PCIEHF
Trigger: AAAATGTTCTATGCAGGGGCAGCTTTTTCTGACTTC...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGGAACACAGAAGTTCATaGTACTTGCTGGAAGCAATA +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWEHRSS*YLLEAI
Trigger: TATTGCTTCCAGCAAGTAGCATGAACTTCTGTGTTC...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGGAACACAGAAGTTCATaGTACTTGCTGGAAGCAATA +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKEHRSS*YLLEAI
Trigger: TATTGCTTCCAGCAAGTAGCATGAACTTCTGTGTTC...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCGAACACAGAAGTTCATaGTACTTGCTGGAAGCAATA +
Preference number: 4 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVEHRSS*YLLEAI
Trigger: TATTGCTTCCAGCAAGTAGCATGAACTTCTGTGTTC...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCACTTCTGGAAACAATCTaGTGCAGTGTCTCCTGTAAT +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPLLETI*CSVSCN
Trigger: ATTACAGGAGACACTGCAGCAGATTGTTTCCAGAAG...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGATACATACATACTTGTaGATGAACGGATGGGGTATT +
Preference number: 4 (lower is better)
Translates to: QVCTALHQSLLISITVHLIHTYL*MNGWGI
Trigger: AATACCCCATCCGTTCATGCACAAGTATGTATGTAT...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCAAGACTCTGGAGTCTATaGATTATGAAGATACCATTC +
Preference number: 4 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPRLWSL*IMKIPF
Trigger: GAATGGTATCTTCATAATGCATAGACTCCAGAGTCT...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGGTCTTTTCTTCTAGATaGCAGCTTCATGAAATCAAG +
Preference number: 4 (lower is better)
Translates to: QVCTALHQSLLISITVHLVFSSR*QLHEIK
Trigger: CTTGATTTCATGAAGCTGGCATCTAGAAGAAAAGAC...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGACAATCTCTTTACTGTaGAAGGAGAACTTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKTISLL*KENFCW
Trigger: CCAGCAAAAGTTCTCCTTCCACAGTAAAGAGATTGT...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCAATCAAAGACTTGCCGTaGATTCAGGTACCACATGAA +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPIKDLP*IQVPHE
Trigger: TTCATGTGGTACCTGAATCCACGGCAAGTCTTTGAT...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCACCACTTGCATGGGGATaGATTTGTAAGTTAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPPLAWG*ICKLEA
Trigger: TGCTTCTAACTTACAAATCCATCCCCATGCAAGTGG...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGTTTTTCTAGTCCAAGATCTCTCACAATTAAAGATATGCCTTTGATCTCTGAGTCTTCTGTACCATGTTaGCCTGATTCCTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SFSSPRSLTIKDMPLISESSVPC*PDSSGR
Trigger: TCTCCCTGAGGAATCAGGCCAACATGGTACAGAAGA...CTCAGAGATCAAAGGCATATCTTTAATTGTGAGAGATCTTGGACTAGAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGCTTCAGACAATCTTGTaGTCTTCCAAGACTGAATGT +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKLQTIL*SSKTEC
Trigger: ACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAG...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGCTTCAGACAATCTTGTaGTCTTCCAAGACTGAATGT +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWLQTIL*SSKTEC
Trigger: ACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAG...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCATTTATTTTTGGGAAGTaGGACACAACACCAGAACAA +
Preference number: 4 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPFIFGK*DTTPEQ
Trigger: TTGTTCTGGTGTTGTGTCCCACTTCCCAAAAATAAA...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGAGCATAGATAAGTCTTaGGGCTATGGTAGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKSIDKS*GYGRFH
Trigger: ATGAAACCTACCATAGCCCCAAGACTTATCTATGCT...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCCGTCAAAGAGGCATGTaGCTTACATTGTTGAATGAG +
Preference number: 4 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTRQRGM*LTLLNE
Trigger: CTCATTCAACAATGTAAGCCACATGCCTCTTTGACG...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGCGTCAAAGAGGCATGTaGCTTACATTGTTGAATGAG +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVRQRGM*LTLLNE
Trigger: CTCATTCAACAATGTAAGCCACATGCCTCTTTGACG...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCATCATGTACATTTACTTaGCTCCCAAATACCTTACAG +
Preference number: 4 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPSCTFT*LPNTLQ
Trigger: CTGTAAGGTATTTGGGAGCCAAGTAAATGTACATGA...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCACCAGAACAAGTTTGTaGACAGGCATAATGTATTAT +
Preference number: 4 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSTRTSL*TGIMYY
Trigger: ATAATACATTATGCCTGTCCACAAACTTGTTCTGGT...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CAA 72 bp GACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTaGTGGTCTTCCAAGACTGAATGTAAAGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: DIQKVLEGLQTI*WSSKTECKEKR
Trigger: TCTCTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
3UTR CAA 72 bp GGTGTAAGCATCACAGAGGAAAGAACTCTCCTTTACTaGAAATACAAACATAGCATAGATAAGTCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: GVSITEERTLLY*KYKHSIDKSWG
Trigger: GCCCCAAGACTTATCTATGCTATGTTTGTATTTCAAGTAAAGGAGAGTTCTTTCCTCTGTGATGCTTACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGTTCGAAAACGACTGTTaGATTTCTCTGGATTTGCTT +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKFENDC*ISLDLL
Trigger: AAGCAAATCCAGAGAAATTCAACAGTCGTTTTCGAA...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATGATCACTTGCTTTCCTaGTGTCCTAATAGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: VRESIKVLLALEIMLVCNDHLLS*CPNSRD
Trigger: ATCCCTACTATTAGGACATCAGGAAAGCAAGTGATC...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCTATGAGATTCTGAACTaGAGGACATTTCAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTYEILN*RTFQAC
Trigger: ACAGGCTTGAAATGTCCTTCAGTTCAGAATCTCATA...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCATATGAGATTCTGAACTaGAGGACATTTCAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPYEILN*RTFQAC
Trigger: ACAGGCTTGAAATGTCCTTCAGTTCAGAATCTCATA...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGCCCTTGAAGCCACTTTaGACAAATTTAATCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKPLKPL*TNLIFL
Trigger: CAGAAAGATTAAATTTGTTCAAAGTGGCTTCAAGGG...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATCCACTTCGTATTATCTaGATCCTCCTTTACCTGGAA +
Preference number: 4 (lower is better)
Translates to: VRESIKVLLALEIMLVCNPLRII*ILLYLE
Trigger: TTCCAGGTAAAGGAGGATTCAGATAATACGAAGTGG...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGATCACCAGCTATTACTaGCTGCAAAATTGCATGATC +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVITSYY*LQNCMI
Trigger: GATCATGCAATTTTGCAGGCAGTAATAGCTGGTGAT...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCATCACCAGCTATTACTaGCTGCAAAATTGCATGATC +
Preference number: 4 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTITSYY*LQNCMI
Trigger: GATCATGCAATTTTGCAGGCAGTAATAGCTGGTGAT...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGCCTGAATTAGCAGACTaGCTCCATTTTTATAGCTTT +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKPELAD*LHFYSF
Trigger: AAAGCTATAAAAATGGAGGCAGTCTGCTAATTCAGG...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGCCATCACTGTGCATTTaGCAGCTAAATTATGTTTCA +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKPSLCI*QLNYVS
Trigger: TGAAACATAATTTAGCTGGCAAATGCACAGTGATGG...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGACAATCTCTTTACTGTaGAAGGAGAACTTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVTISLL*KENFCW
Trigger: CCAGCAAAAGTTCTCCTTCCACAGTAAAGAGATTGT...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGTTTTTCTAGTCCAAGATCTCTCACAATTAAAGATATGCCTTTGATCTCTGAGTTCAAGCGCATCTTTTaGCCCTTCCTGAGAAAGATC +
Preference number: 4 (lower is better)
Translates to: SFSSPRSLTIKDMPLISEFKRIF*PFLRKI
Trigger: GATCTTTCTCAGGAAGGGCCAAAAGATGCGCTTGAA...CTCAGAGATCAAAGGCATATCTTTAATTGTGAGAGATCTTGGACTAGAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CTCCTAGACCATAAGGCCTTAGCTCTTTCCAAAGCCCAGGACCAATTTTTAAAACAGAATTCGCAGATTTaGTACTTTCCTATACAATTC +
Preference number: 4 (lower is better)
Translates to: LLDHKALALSKAQDQFLKQNSQI*YFPIQF
Trigger: GAATTGTATAGGAAAGTACCAAATCTGCGAATTCTG...TTTTAAAAATTGGTCCTGGGCTTTGGAAAGAGCTAAGGCCTTATGGTCTAGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGAAGGATCAAATTTTGTaGAACTCGTACTGTATTCCA +
Preference number: 4 (lower is better)
Translates to: GRFLQERDRYMNSISFFQKDQIL*NSYCIP
Trigger: TGGAATACAGTACGAGTTCCACAAAATTTGATCCTT...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGCACTTAAAATTGAGTaGTTCTGCAAACTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVALKIE*FCKLAV
Trigger: CACAGCTAGTTTGCAGAACCACTCAATTTTAAGTGC...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCAGAGCAATAGAGTCTTaGATGTCAGGGCCATTTTTA +
Preference number: 4 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTRAIES*MSGPFL
Trigger: TAAAAATGGCCCTGACATCCAAGACTCTATTGCTCT...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCATCCCAAACAACAAATaGGTAGTAAGTAGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTIPNNK*VVSRGK
Trigger: CTTTCCCCTACTTACTACCCATTTGTTGTTTGGGAT...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGAGATCAGGAGCCATTTaGTTGCATATAGAAGGTACA +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVRSGAI*LHIEGT
Trigger: TGTACCTTCTATATGCAACCAAATGGCTCCTGATCT...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGTTCGAAAACGACTGTTaGATTTCTCTGGATTTGCTT +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVFENDC*ISLDLL
Trigger: AAGCAAATCCAGAGAAATTCAACAGTCGTTTTCGAA...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCCATAATTCTATAAGATaGTCAAGGTCAGTGGACATC +
Preference number: 4 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTHNSIR*SRSVDI
Trigger: GATGTCCACTGACCTTGATCATCTTATAGAATTATG...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCAAAAAATAGGGTAAACTaGCAGGACTATCCTATCTGT +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPKNRVN*QDYPIC
Trigger: ACAGATAGGATAGTCCTGTCAGTTTACCCTATTTTT...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGAATTTCTCTGGATTTaGTTCTCTGGATTCATGGAA +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVEFLWI*FSGFME
Trigger: TTCCATGAATCCAGAGAAGCAAATCCAGAGAAATTC...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGCCTGAATTAGCAGACTaGCTCCATTTTTATAGCTTT +
Preference number: 4 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVPELAD*LHFYSF
Trigger: AAAGCTATAAAAATGGAGGCAGTCTGCTAATTCAGG...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCCCTGAATTAGCAGACTaGCTCCATTTTTATAGCTTT +
Preference number: 4 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTPELAD*LHFYSF
Trigger: AAAGCTATAAAAATGGAGGCAGTCTGCTAATTCAGG...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATGAACACAGAAGTTCATaGTACTTGCTGGAAGCAATA +
Preference number: 4 (lower is better)
Translates to: VRESIKVLLALEIMLVCNEHRSS*YLLEAI
Trigger: TATTGCTTCCAGCAAGTAGCATGAACTTCTGTGTTC...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATTCTCAAAGCAGTCAGTaGCATGACACAAAGAAACAA +
Preference number: 4 (lower is better)
Translates to: VRESIKVLLALEIMLVCNSQSSQ*HDTKKQ
Trigger: TTGTTTCTTTGTGTCATGGCACTGACTGCTTTGAGA...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCAATACATACATACTTGTaGATGAACGGATGGGGTATT +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPIHTYL*MNGWGI
Trigger: AATACCCCATCCGTTCATGCACAAGTATGTATGTAT...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATTGTTTAACCTGTCTTTaGCTACTGGTGTTCACTAGA +
Preference number: 4 (lower is better)
Translates to: VRESIKVLLALEIMLVCNCLTCL*LLVFTR
Trigger: TCTAGTGAACACCAGTAGGCAAAGACAGGTTAAACA...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGGCAACATAAACAATTACAGGAACTCTTGGTCATGAATTTTATGACACAGGTATTCTACTGCCACAGCTaGTACTTGTTTATGGATTCC +
Preference number: 4 (lower is better)
Translates to: RQHKQLQELLVMNFMTQVFYCHS*YLFMDS
Trigger: GGAATCCATAAACAAGTAGCAGCTGTGGCAGTAGAA...TACCTGTGTCATAAAATTCATGACCAAGAGTTCCTGTAATTGTTTATGTTGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGGCAACATAAACAATTACAGGAACTCTTGGTCATGAATTTTATGACACAGGTAATCAAAGACTTGCCGTaGATTCAGGTACCACATGAA +
Preference number: 4 (lower is better)
Translates to: RQHKQLQELLVMNFMTQVIKDLP*IQVPHE
Trigger: TTCATGTGGTACCTGAATCCACGGCAAGTCTTTGAT...TACCTGTGTCATAAAATTCATGACCAAGAGTTCCTGTAATTGTTTATGTTGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGCAGAATTCGCAGATTTaGTACTTTCCTATACAATTC +
Preference number: 4 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWQNSQI*YFPIQF
Trigger: GAATTGTATAGGAAAGTACCAAATCTGCGAATTCTG...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCCAGAATTCGCAGATTTaGTACTTTCCTATACAATTC +
Preference number: 4 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVQNSQI*YFPIQF
Trigger: GAATTGTATAGGAAAGTACCAAATCTGCGAATTCTG...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCAAGGATCAAATTTTGTaGAACTCGTACTGTATTCCA +
Preference number: 4 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVKDQIL*NSYCIP
Trigger: TGGAATACAGTACGAGTTCCACAAAATTTGATCCTT...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGGCAACATAAACAATTACAGGAACTCTTGGTCATGAATTTTATGACACAGGTATTGTGCATGAACGGATaGGGTATTTCTGACATCACA +
Preference number: 4 (lower is better)
Translates to: RQHKQLQELLVMNFMTQVLCMNG*GISDIT
Trigger: TGTGATGTCAGAAATACCCCATCCGTTCATGCACAA...TACCTGTGTCATAAAATTCATGACCAAGAGTTCCTGTAATTGTTTATGTTGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGTTTTTCTAGTCCAAGATCTCTCACAATTAAAGATATGCCTTTGATCTCTGAGCCTGTCTTTGCCTACTaGTGTTCACTAGACATATAC +
Preference number: 4 (lower is better)
Translates to: SFSSPRSLTIKDMPLISEPVFAY*CSLDIY
Trigger: GTATATGTCTAGTGAACACCAGTAGGCAAAGACAGG...CTCAGAGATCAAAGGCATATCTTTAATTGTGAGAGATCTTGGACTAGAAAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGTTTGAGCATAATATCTaGGGAAGATTTTTGCAACTG +
Preference number: 4 (lower is better)
Translates to: LEGLQTILWSSKTECKEKFEHNI*GRFLQL
Trigger: CAGTTGCAAAAATCTTCCCCAGATATTATGCTCAAA...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCATCATGTACATTTACTTaGCTCCCAAATACCTTACAG +
Preference number: 4 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPSCTFT*LPNTLQ
Trigger: CTGTAAGGTATTTGGGAGCCAAGTAAATGTACATGA...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATAACCACCTCGTCCTTTaGAAAGCTCCATTAAAAAGT +
Preference number: 4 (lower is better)
Translates to: VRESIKVLLALEIMLVCNNHLVL*KAPLKS
Trigger: ACTTTTTAATGGAGCTTTCCAAAGGACGAGGTGGTT...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGGCAACATAAACAATTACAGGAACTCTTGGTCATGAATTTTATGACACAGGTACATCCATGTGTCCTTTaGGTAAAAGGTATACTTGTC +
Preference number: 4 (lower is better)
Translates to: RQHKQLQELLVMNFMTQVHPCVL*VKGILV
Trigger: GACAAGTATACCTTTTACTCAAAGGACACATGGATG...TACCTGTGTCATAAAATTCATGACCAAGAGTTCCTGTAATTGTTTATGTTGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATCGACAGCAAAAACTCTaGCTTTTTGATTTCACATTC +
Preference number: 4 (lower is better)
Translates to: VRESIKVLLALEIMLVCNRQQKL*LFDFTF
Trigger: GAATGTGAAATCAAAAAGTCAGAGTTTTTGCTGTCG...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR TCA 90 bp AGTTTTTCTAGTCCAAGATCTCTCACAATTAAAGATATGCCTTTGATCTCTGAGTTTCACTTTGACTCCTaGATCTGTGACCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: SFSSPRSLTIKDMPLISEFHFDS*ICDLFA
Trigger: AGCAAAAAGGTCACAGATTCAGGAGTCAAAGTGAAA...CTCAGAGATCAAAGGCATATCTTTAATTGTGAGAGATCTTGGACTAGAAAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGGCAACATAAACAATTACAGGAACTCTTGGTCATGAATTTTATGACACAGGTAATCACCAGCTATTACTaGCTGCAAAATTGCATGATC +
Preference number: 4 (lower is better)
Translates to: RQHKQLQELLVMNFMTQVITSYY*LQNCMI
Trigger: GATCATGCAATTTTGCAGGCAGTAATAGCTGGTGAT...TACCTGTGTCATAAAATTCATGACCAAGAGTTCCTGTAATTGTTTATGTTGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCCCAAGTCAATTAGGGTaGTTTCTATTATCATTCAAC +
Preference number: 4 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTPSQLG*FLLSFN
Trigger: GTTGAATGATAATAGAAAGCACCCTAATTGACTTGG...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATATTAGGGAAGCACTATaGTATGTCCAAGGACAAAAT +
Preference number: 4 (lower is better)
Translates to: VRESIKVLLALEIMLVCNIREAL*YVQGQN
Trigger: ATTTTGTCCTTGGACATAGCATAGTGCTTCCCTAAT...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGTTTTTCTAGTCCAAGATCTCTCACAATTAAAGATATGCCTTTGATCTCTGAGACATGCTACAGGAGGTaGTTTAATGTTGAAGCCATT +
Preference number: 4 (lower is better)
Translates to: SFSSPRSLTIKDMPLISETCYRR*FNVEAI
Trigger: AATGGCTTCAACATTAAACCACCTCCTGTAGCATGT...CTCAGAGATCAAAGGCATATCTTTAATTGTGAGAGATCTTGGACTAGAAAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGTTTTTCTAGTCCAAGATCTCTCACAATTAAAGATATGCCTTTGATCTCTGAGAACCGTATTTATTTTTaGGAAGTGGGACACAACACC +
Preference number: 4 (lower is better)
Translates to: SFSSPRSLTIKDMPLISENRIYF*EVGHNT
Trigger: GGTGTTGTGTCCCACTTCCCAAAAATAAATACGGTT...CTCAGAGATCAAAGGCATATCTTTAATTGTGAGAGATCTTGGACTAGAAAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGGCAACATAAACAATTACAGGAACTCTTGGTCATGAATTTTATGACACAGGTAGAATTTCTCTGGATTTaGTTCTCTGGATTCATGGAA +
Preference number: 4 (lower is better)
Translates to: RQHKQLQELLVMNFMTQVEFLWI*FSGFME
Trigger: TTCCATGAATCCAGAGAAGCAAATCCAGAGAAATTC...TACCTGTGTCATAAAATTCATGACCAAGAGTTCCTGTAATTGTTTATGTTGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR GCA 90 bp AGTTTTTCTAGTCCAAGATCTCTCACAATTAAAGATATGCCTTTGATCTCTGAGGTGGTTCAATTAAGATaGAGGCAGAAGCCATTTTAT +
Preference number: 4 (lower is better)
Translates to: SFSSPRSLTIKDMPLISEVVQLR*RQKPFY
Trigger: ATAAAATGGCTTCTGCCTGCATCTTAATTGAACCAC...CTCAGAGATCAAAGGCATATCTTTAATTGTGAGAGATCTTGGACTAGAAAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CCA 90 bp AGTTTTTCTAGTCCAAGATCTCTCACAATTAAAGATATGCCTTTGATCTCTGAGATACTTAAGCTGAGATaGAAACTCCTAGACCATAAG +
Preference number: 4 (lower is better)
Translates to: SFSSPRSLTIKDMPLISEILKLR*KLLDHK
Trigger: CTTATGGTCTAGGAGTTTCCATCTCAGCTTAAGTAT...CTCAGAGATCAAAGGCATATCTTTAATTGTGAGAGATCTTGGACTAGAAAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CAA 72 bp ATAATCGGTAAGTCAGGGAGAGCATCAAAGTTCTACTaGCATTGGAAATTATGCTTGTATGTAATTAGAGTC +
Preference number: 4 (lower is better)
Translates to: IIGKSGRASKFY*HWKLCLYVIRV
Trigger: GACTCTAATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGACTTACCGATTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CAA 72 bp TCTAGTCCAAGATCTCTCACAATTAAAGATATGCCTTaGATCTCTGAGTTAGTTGTTCAATCTTCACTTAAC +
Preference number: 4 (lower is better)
Translates to: SSPRSLTIKDMP*ISELVVQSSLN
Trigger: GTTAAGTGAAGATTGAACAACTAACTCAGAGATCAAAGGCATATCTTTAATTGTGAGAGATCTTGGACTAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
3UTR CAA 72 bp AGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTaGTATGTAATTAGAGTCTCAATCCAACCAATGATG +
Preference number: 4 (lower is better)
Translates to: RASKFYLHWKLC*YVIRVSIQPMM
Trigger: CATCATTGGTTGGATTGAGACTCTAATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS CCA 90 bp TGCTGCTGCCGCCCGTCGCCCCTTTCTCCTCTCCCGCCGAGGAGCTaGGGTTCATGGCGCCCGCTCCGGCGGCCGCGGAGGGAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: CCCRPSPLSPLPPRS*GSWRPLRRPRRERR
Trigger: CCTGCGCTCCCTCCGCGGCCGCCGGAGCGGGCGCCATGAACCCCAGCTCCTCGGCGGGAGAGGAGAAAGGGGCGACGGGCGGCAGCAGCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000470895.5
ENST00000614521.2
CDS GCA 90 bp ACCAGTCTGAGATCCCCGAGGCTTGTTCCACCACCAGGTCAGGCATaGCCGGAGGTGTCCCCGCCGGCTGTGACACCACCATATCTGGGT +
Preference number: 5 (lower is better)
Translates to: TSLRSPRLVPPPGQA*PEVSPPAVTPPYLG
Trigger: ACCCAGATATGGTGGTGTCACAGCCGGCGGGGACACCTCCGGGCATGCCTGACCTGGTGGTGGAACAAGCCTCGGGGATCTCAGACTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000460662.2
ENST00000614521.2
CDS GCA 90 bp CCTCTTCCTAAATCCCGAGCGAAAGCCCAAGCTGAACATGAACTCTaGCCGGAGGCGACGGGCTGCGGCGGAGGGGGAGAGAGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: PLPKSRAKAQAEHEL*PEATGCGGGGERGG
Trigger: TCCTCCTCTCTCTCCCCCTCCGCCGCAGCCCGTCGCCTCCGGGCAGAGTTCATGTTCAGCTTGGGCTTTCGCTCGGGATTTAGGAAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424189.6
ENST00000446122.5
ENST00000470895.5
CDS GCA 90 bp AAGAGACTGGTGACCCCGAGGCTTGTTCCACCACCAGGTCAGGCATaGCCGGAGGTGTCCCCGCCGGCTGTGACACCACCATATCTGGGT +
Preference number: 5 (lower is better)
Translates to: KRLVTPRLVPPPGQA*PEVSPPAVTPPYLG
Trigger: ACCCAGATATGGTGGTGTCACAGCCGGCGGGGACACCTCCGGGCATGCCTGACCTGGTGGTGGAACAAGCCTCGGGGTCACCAGTCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000497321.5
CDS-3UTR CAA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCGCTGGCAGGCAGCCTaGTGCAGTGCAGTCTCACCC +
Preference number: 5 (lower is better)
Translates to: PGELPNCREGRCDTLAHVRWQAA*CSAVSP
Trigger: GGGTGAGACTGCACTGCACAAGGCTGCCTGCCAGCG...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCCGCTGGCAGGCAGCCTaGTGCAGTGCAGTCTCACCC +
Preference number: 5 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSRWQAA*CSAVSP
Trigger: GGGTGAGACTGCACTGCACAAGGCTGCCTGCCAGCG...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS CCA 90 bp GATGCTCCTGCATCCACCAGAAGCTGGCACACAGCCCGGTTCCGCTaGCAGGCAGCCTTGTGCAGTGCAGTCTCACCCGTTTCACTGTCT +
Preference number: 5 (lower is better)
Translates to: DAPASTRSWHTARFR*QAALCSAVSPVSLS
Trigger: AGACAGTGAAACGGGTGAGACTGCACTGCACAAGGCTGCCTGCCAGCGGAACCGGGCTGTGTGCCAGCTTCTGGTGGATGCAGGAGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000477835.5
ENST00000494390.5
ENST00000497321.5
ENST00000614521.2
CDS-3UTR CAA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCCATGGCCCCCAACTaGCAGGGCTGCCAAAGAGGC +
Preference number: 5 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSSMAPN*QGCQRG
Trigger: GCCTCTTTGGCAGCCCTGCAAGTTGGGGGCCATGGA...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS GCA 90 bp CTCACTCCAGTCCAAAGTCGCTCTGGGCTCCTTGGCTGGACCATTTaGCACAGGAAGGCTGAGGGGATGTGCAGGAGCCAGATGCTGGAG +
Preference number: 5 (lower is better)
Translates to: LTPVQSRSGLLGWTI*HRKAEGMCRSQMLE
Trigger: CTCCAGCATCTGGCTCCTGCACATCCCCTCAGCCTTCCTGTGGCAAATGGTCCAGCCAAGGAGCCCAGAGCGACTTTGGACTGGAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000470895.5
ENST00000483619.1
ENST00000614521.2
CDS-3UTR CAA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCAGGTCTCCCGAGACGTaGGTCTCCAGCCACAGGTGT +
Preference number: 5 (lower is better)
Translates to: PGELPNCREGRCDTLAHVRSPET*VSSHRC
Trigger: ACACCTGTGGCTGGAGACCAACGTCTCGGGAGACCT...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS GCA 90 bp TTGAGGTGTCTTACCCTTGGAGTCCGTCTTTCTCAGAGATGCTCCTaGATCCACCAGAAGCTGGCACACAGCCCGGTTCCGCTGGCAGGC +
Preference number: 5 (lower is better)
Translates to: LRCLTLGVRLSQRCS*IHQKLAHSPVPLAG
Trigger: GCCTGCCAGCGGAACCGGGCTGTGTGCCAGCTTCTGGTGGATGCAGGAGCATCTCTGAGAAAGACGGACTCCAAGGGTAAGACACCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000477835.5
ENST00000486153.1
ENST00000494390.5
ENST00000497321.5
ENST00000614521.2
CDS CCA 90 bp GATGCTCCTGCATCCACCAGAAGCTGGCACACAGCCCGGTTCCGCTaGCAGGCAGCCTTGTGCAGTGCAGTCTCACCCCTAAATCAAAGA +
Preference number: 5 (lower is better)
Translates to: DAPASTRSWHTARFR*QAALCSAVSPLNQR
Trigger: TCTTTGATTTAGGGGTGAGACTGCACTGCACAAGGCTGCCTGCCAGCGGAACCGGGCTGTGTGCCAGCTTCTGGTGGATGCAGGAGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486153.1
CDS-3UTR CAA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCAGTCCTGCATGGCTATaGGCTACAGCCCAGCAGCCT +
Preference number: 5 (lower is better)
Translates to: PGELPNCREGRCDTLAHVSPAWL*ATAQQP
Trigger: AGGCTGCTGGGCTGTAGCCAATAGCCATGCAGGACT...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTGCCAGCTGGCAGCTTaGCAAAAGCATGGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSCQLAA*QKHGSG
Trigger: CCCAGAGCCATGCTTTTGCAAAGCTGCCAGCTGGCA...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS GCA 90 bp CCTCATAATAGGGAGCTATCATCCCCAGCCCACTGTCACTCAGCATaGGTTTCCGCAGGGCAGGATTCCACCAGTCTGAGATCCCCGAGG +
Preference number: 5 (lower is better)
Translates to: PHNRELSSPAHCHSA*VSAGQDSTSLRSPR
Trigger: CCTCGGGGATCTCAGACTGGTGGAATCCTGCCCTGCGGAAACGCATGCTGAGTGACAGTGGGCTGGGGATGATAGCTCCCTATTATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000460662.2
ENST00000614521.2
CDS CCA 90 bp CTAGGAAGCACCACCGAGGAGAGAGCCTCTGTGCTGAGAGAGCCCTaGGGAAGGAGGTTTCATGGTCCTCCTGTAGGCGGTCTATGTACA +
Preference number: 5 (lower is better)
Translates to: LGSTTEERASVLREP*GRRFHGPPVGGLCT
Trigger: TGTACATAGACCGCCTACAGGAGGACCATGAAACCTCCTTCCCCAGGGCTCTCTCAGCACAGAGGCTCTCTCCTCGGTGGTGCTTCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460662.2
CDS CCA 90 bp CTTGGCAGTTCTCCTCTCCAAGGTAGCAGAGGTCTCCCGAGACGTTaGTCTCCAGCCACAGGTGTTCTCCATTCACGGCATTCTCACTCC +
Preference number: 5 (lower is better)
Translates to: LGSSPLQGSRGLPRR*SPATGVLHSRHSHS
Trigger: GGAGTGAGAATGCCGTGAATGGAGAACACCTGTGGCTGGAGACCAACGTCTCGGGAGACCTCTGCTACCTTGGAGAGGAGAACTGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000470895.5
ENST00000614521.2
CDS CCA 90 bp CTGTACCATGTTGGCCTGATTCCTCAGGGAGATCCGAATCATAGCTaGGGCCAACCTACAGGGCTCCCCATCCACTTGCATGGGGATGGA +
Preference number: 5 (lower is better)
Translates to: LYHVGLIPQGDPNHS*GQPTGLPIHLHGDG
Trigger: TCCATCCCCATGCAAGTGGATGGGGAGCCCTGTAGGTTGGCCCCAGCTATGATTCGGATCTCCCTGAGGAATCAGGCCAACATGGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000460662.2
ENST00000614521.2
CDS CCA 90 bp CTTGGCAGTTCTCCTCTCCAAGGTAGCAGAGGTCTCCCGAGACGTTaGTCTCCAGCCACAGGTGTTCTCCATTCACGGCATTCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: LGSSPLQGSRGLPRR*SPATGVLHSRHSPA
Trigger: AGCTGGAGAATGCCGTGAATGGAGAACACCTGTGGCTGGAGACCAACGTCTCGGGAGACCTCTGCTACCTTGGAGAGGAGAACTGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453654.6
CDS-3UTR CAA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGGTCGCTCTGGGCTCCTaGGCTGGACCATTTGCCACA +
Preference number: 5 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLVALGS*AGPFAT
Trigger: TGTGGCAAATGGTCCAGCCAAGGAGCCCAGAGCGAC...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CAA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGAGGTCTCCCGAGACGTaGGTCTCCAGCCACAGGTGT +
Preference number: 5 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLRSPET*VSSHRC
Trigger: ACACCTGTGGCTGGAGACCAACGTCTCGGGAGACCT...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCAACATCTGCAGGACTTaGGTTCCCTGGTTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSNICRT*VPWLPP
Trigger: TGGAGGCAACCAGGGAACCAAAGTCCTGCAGATGTT...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCATCCATGGCCCCCAACTaGCAGGGCTGCCAAAGAGGC +
Preference number: 5 (lower is better)
Translates to: KMATHRQYGAVQTAQAEPSMAPN*QGCQRG
Trigger: GCCTCTTTGGCAGCCCTGCAAGTTGGGGGCCATGGA...TGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCGCAGATGTGATACGCTaGCTCATGTCCTCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: PGELPNCREGRCDTLAHVADVIR*LMSSLP
Trigger: GGGCAAAGAGGACATGAGCAAGCGTATCACATCTGC...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTTGGGTAGGACCTCCCTaGTGGTTGCCACGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: KAKMATHRQYGAVQTAQAWVGPP*WLPRWW
Trigger: CCACCAGCGTGGCAACCACAAGGGAGGTCCTACCCA...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS GCA 90 bp TCTTTCTTGAGGTGTCTTACCCTTGGAGTCCGTCTTTCTCAGAGATaGTCCTGCATCCACCAGAAGCTGGCACACAGCCCGGTTCCGCTG +
Preference number: 5 (lower is better)
Translates to: SFLRCLTLGVRLSQR*SCIHQKLAHSPVPL
Trigger: CAGCGGAACCGGGCTGTGTGCCAGCTTCTGGTGGATGCAGGAGCATCTCTGAGAAAGACGGACTCCAAGGGTAAGACACCTCAAGAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000477835.5
ENST00000486153.1
ENST00000494390.5
ENST00000497321.5
ENST00000614521.2
CDS GCA 90 bp AAGCTGGCACACAGCCCGGTTCCGCTGGCAGGCAGCCTTGTGCAGTaGAGTCTCACCCCTAAATCAAAGATGAAATGGGAAACCACCCAT +
Preference number: 5 (lower is better)
Translates to: KLAHSPVPLAGSLVQ*SLTPKSKMKWETTH
Trigger: ATGGGTGGTTTCCCATTTCATCTTTGATTTAGGGGTGAGACTGCACTGCACAAGGCTGCCTGCCAGCGGAACCGGGCTGTGTGCCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486153.1
CDS-3UTR CAA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGGCCTGCCCGGGAGATaGCTTTCCTGTACGAGACCT +
Preference number: 5 (lower is better)
Translates to: KAKMATHRQYGAVQTAQAGLPGR*LSCTRP
Trigger: AGGTCTCGTACAGGAAAGCAATCTCCCGGGCAGGCC...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614521.2
CDS TCA 90 bp TCAGCTTCTTCCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTaGTACGCTTGCTCATGTCCTCTTTGCCCGAATACCAGGGTCAAA +
Preference number: 5 (lower is better)
Translates to: SASSRGAAQLQGGQM*YACSCPLCPNTRVK
Trigger: TTTGACCCTGGTATTCGGGCAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGGAAGAAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000477835.5
ENST00000486153.1
ENST00000494390.5
ENST00000614521.2
CDS-3UTR CAA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCTCCATGGCCCCCAACTaGCAGGGCTGCCAAAGAGGC +
Preference number: 5 (lower is better)
Translates to: LQERDRYMNSISFFQGSCSMAPN*QGCQRG
Trigger: GCCTCTTTGGCAGCCCTGCAAGTTGGGGGCCATGGA...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCGGCCTTCAGACAATCTaGTGGTCTTCCAAGACTGAA +
Preference number: 5 (lower is better)
Translates to: PGELPNCREGRCDTLAHVGLQTI*WSSKTE
Trigger: TTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCC...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCCACCGCACCGGGGCATaGTGGGAAACTCCGCTCACT +
Preference number: 5 (lower is better)
Translates to: LQERDRYMNSISFFQGSCHRTGA*WETPLT
Trigger: AGTGAGCGGAGTTTCCCACAATGCCCCGGTGCGGTG...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS CCA 90 bp GGCAGCCTTGTGCAGTGCAGTCTCACCCCTAAATCAAAGATGAAATaGGAAACCACCCATAAAGGGGTTGGAGGCAGCAGGGAATGGGTG +
Preference number: 5 (lower is better)
Translates to: GSLVQCSLTPKSKMK*ETTHKGVGGSREWV
Trigger: CACCCATTCCCTGCTGCCTCCAACCCCTTTATGGGTGGTTTCCCATTTCATCTTTGATTTAGGGGTGAGACTGCACTGCACAAGGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486153.1
CDS-3UTR CAA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCACAAAAGGACGACCTTaGTTTTCCTGTTCCATCCCT +
Preference number: 5 (lower is better)
Translates to: PGELPNCREGRCDTLAHVTKGRP*FSCSIP
Trigger: AGGGATGGAACAGGAAAACAAAGGTCGTCCTTTTGT...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGAACATCTGCAGGACTTaGGTTCCCTGGTTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLNICRT*VPWLPP
Trigger: TGGAGGCAACCAGGGAACCAAAGTCCTGCAGATGTT...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCATTCAAGCGCATCTTTaGGCCCTTCCTGAGAAAGAT +
Preference number: 5 (lower is better)
Translates to: PGELPNCREGRCDTLAHVIQAHL*ALPEKD
Trigger: ATCTTTCTCAGGAAGGGCCAAAAGATGCGCTTGAAT...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGGCAGATGTGATACGCTaGCTCATGTCCTCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLADVIR*LMSSLP
Trigger: GGGCAAAGAGGACATGAGCAAGCGTATCACATCTGC...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCGCAGATGTGATACGCTaGCTCATGTCCTCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: SLVVATLVAEAKEFSMIAADVIR*LMSSLP
Trigger: GGGCAAAGAGGACATGAGCAAGCGTATCACATCTGC...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCGTCTCAGGTAGATTCTaGCAGGAGAGAGACAGATAT +
Preference number: 5 (lower is better)
Translates to: PGELPNCREGRCDTLAHVVSGRF*QERDRY
Trigger: ATATCTGTCTCTCTCCTGCAAGAATCTACCTGAGAC...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCGGCTATCATGTTCTGTaGTACATCTTGGTAGCCCTT +
Preference number: 5 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSGYHVL*YILVAL
Trigger: AAGGGCTACCAAGATGTACAACAGAACATGATAGCC...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS TCA 90 bp TGGCAGGCAGCCTTGTGCAGTGCAGTCTCACCCCTAAATCAAAGATaGAATGGGAAACCACCCATAAAGGGGTTGGAGGCAGCAGGGAAT +
Preference number: 5 (lower is better)
Translates to: WQAALCSAVSPLNQR*NGKPPIKGLEAAGN
Trigger: ATTCCCTGCTGCCTCCAACCCCTTTATGGGTGGTTTCCCATTTCATCTTTGATTTAGGGGTGAGACTGCACTGCACAAGGCTGCCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486153.1
CDS TCA 90 bp AGGAAGCCTCCCTTACCAAGTGGCATCTCCTCCAAAGAGACCACCTaGTTTGTAGCGACACATGGCCCACCAGGTAAAGTAACAGCTACC +
Preference number: 5 (lower is better)
Translates to: RKPPLPSGISSKETT*FVATHGPPGKVTAT
Trigger: GGTAGCTGTTACTTTACCTGGTGGGCCATGTGTCGCTACAAATCAGGTGGTCTCTTTGGAGGAGATGCCACTTGGTAAGGGAGGCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483619.1
CDS-3UTR CAA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGCGCTGGCAGGCAGCCTaGTGCAGTGCAGTCTCACCC +
Preference number: 5 (lower is better)
Translates to: GRFLQERDRYMNSISFFQRWQAA*CSAVSP
Trigger: GGGTGAGACTGCACTGCACAAGGCTGCCTGCCAGCG...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CTCCTAGACCATAAGGCCTTAGCTCTTTCCAAAGCCCAGGACCAATTTTTAAAACGCTGGCAGGCAGCCTaGTGCAGTGCAGTCTCACCC +
Preference number: 5 (lower is better)
Translates to: LLDHKALALSKAQDQFLKRWQAA*CSAVSP
Trigger: GGGTGAGACTGCACTGCACAAGGCTGCCTGCCAGCG...TTTTAAAAATTGGTCCTGGGCTTTGGAAAGAGCTAAGGCCTTATGGTCTAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGCTGCTGTGCTCTTTCTaGAGGTGTCTTACCCTTGGA +
Preference number: 5 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLLLCSF*RCLTLG
Trigger: TCCAAGGGTAAGACACCTCAAGAAAGAGCACAGCAG...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCGATATAGCACACAAGTaGACATTATCCATGTGGCAC +
Preference number: 5 (lower is better)
Translates to: PGELPNCREGRCDTLAHVDIAHK*TLSMWH
Trigger: GTGCCACATGGATAATGTCAACTTGTGTGCTATATC...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCGATATAGCACACAAGTaGACATTATCCATGTGGCAC +
Preference number: 5 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSDIAHK*TLSMWH
Trigger: GTGCCACATGGATAATGTCAACTTGTGTGCTATATC...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCCTGCAGCACTATCATTaGCTATATGAATCTGCACAG +
Preference number: 5 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSLQHYH*LYESAQ
Trigger: CTGTGCAGATTCATATAGCAAATGATAGTGCTGCAG...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCCTCCATGCCTCTGTATaGGCAGAGGATATAGAATTT +
Preference number: 5 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSLHASV*AEDIEF
Trigger: AAATTCTATATCCTCTGCCAATACAGAGGCATGGAG...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS GCA 90 bp TTCCTTCCAGCGGTCCCACATTCTGAGTTGCTAGTAGTATTCGAGTaGTCAGGAAGCCTCCCTTACCAAGTGGCATCTCCTCCAAAGAGA +
Preference number: 5 (lower is better)
Translates to: FLPAVPHSELLVVFE*SGSLPYQVASPPKR
Trigger: TCTCTTTGGAGGAGATGCCACTTGGTAAGGGAGGCTTCCTGAGCACTCGAATACTACTAGCAACTCAGAATGTGGGACCGCTGGAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483619.1
CDS-3UTR CAA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGAAGGTCTCCCGAGACGTaGGTCTCCAGCCACAGGTGT +
Preference number: 5 (lower is better)
Translates to: ALYNVTATLHTDVAFASGRSPET*VSSHRC
Trigger: ACACCTGTGGCTGGAGACCAACGTCTCGGGAGACCT...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCAGTGGAAGGAGAACTTTaGCTGGAAGCCCTTACCACA +
Preference number: 5 (lower is better)
Translates to: KMATHRQYGAVQTAQAEPVEGEL*LEALTT
Trigger: TGTGGTAAGGGCTTCCAGCAAAAGTTCTCCTTCCAC...TGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCGGGCTCCCCATCCACTaGCATGGGGATGGATTTGTA +
Preference number: 5 (lower is better)
Translates to: LQERDRYMNSISFFQGSCGLPIH*HGDGFV
Trigger: TACAAATCCATCCCCATGCAAGTGGATGGGGAGCCC...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGCACCGCACCGGGGCATaGTGGGAAACTCCGCTCACT +
Preference number: 5 (lower is better)
Translates to: GRFLQERDRYMNSISFFQHRTGA*WETPLT
Trigger: AGTGAGCGGAGTTTCCCACAATGCCCCGGTGCGGTG...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CAA 90 bp CCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCTCATACAACAAGCCTTaGTTCTTGGGTCAAGGATTA +
Preference number: 5 (lower is better)
Translates to: PGELPNCREGRCDTLAHVSYNKP*FLGQGL
Trigger: TAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA...GACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS TCA 90 bp GTGAGTCTGGAAGCTTTGGCAGTGAAACCAGAAGGACTCAGCCTGTaGGGGAAGGTTGGTTTGTCTCCAACTCGAACTGGGAAATACCTT +
Preference number: 5 (lower is better)
Translates to: VSLEALAVKPEGLSL*GKVGLSPTRTGKYL
Trigger: AAGGTATTTCCCAGTTCGAGTTGGAGACAAACCAACCTTCCCTCACAGGCTGAGTCCTTCTGGTTTCACTGCCAAAGCTTCCAGACTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475388.1
CDS CCA 90 bp CCATCTTCAAGTTCTTCTGGAGGCAAGTCGGGGTTTCTTTCCACATaGAGGTTCCAGCGATCTAGCTGTACAACTGTCCCATCTTCCACT +
Preference number: 5 (lower is better)
Translates to: PSSSSSGGKSGFLST*RFQRSSCTTVPSST
Trigger: AGTGGAAGATGGGACAGTTGTACAGCTAGATCGCTGGAACCTCCATGTGGAAAGAAACCCCGACTTGCCTCCAGAAGAACTTGAAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS CCA 90 bp CATGAAAAGGCAGTGGAAATCACTGGGTGTAGGAATCAGCAGCTGTaGGCTTCTGGAAATAACGTCCTGGCACTTACACGACCTTGTTCC +
Preference number: 5 (lower is better)
Translates to: HEKAVEITGCRNQQL*ASGNNVLALTRPCS
Trigger: GGAACAAGGTCGTGTAAGTGCCAGGACGTTATTTCCAGAAGCCCACAGCTGCTGATTCCTACACCCAGTGATTTCCACTGCCTTTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475388.1
CDS-3UTR CAA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCAAGGTCTCCCGAGACGTaGGTCTCCAGCCACAGGTGT +
Preference number: 5 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPRSPET*VSSHRC
Trigger: ACACCTGTGGCTGGAGACCAACGTCTCGGGAGACCT...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCTTTTGCAAATCTGACTaGGCAGTTCTCCTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: SLVVATLVAEAKEFSMIAFCKSD*AVLLSK
Trigger: CTTGGAGAGGAGAACTGCCAAGTCAGATTTGCAAAA...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGTCTTCTTCTTCCGATTaGAAGCCTTCAGGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLSSSSD*KPSGSS
Trigger: AGAACTCCCTGAAGGCTTCAAATCGGAAGAAGAAGA...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCCCAGAATTCGCAGATTaGGTACTTTCCTATACAATT +
Preference number: 5 (lower is better)
Translates to: QGSCPIAGRADVIRLLMSPEFAD*VLSYTI
Trigger: AATTGTATAGGAAAGTACCAAATCTGCGAATTCTGG...GGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGTGTCCCATCTTCCACTaGACACAGGATCTTAGAAAC +
Preference number: 5 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLCPIFH*TQDLRN
Trigger: GTTTCTAAGATCCTGTGTCAAGTGGAAGATGGGACA...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGACAGACTGGGGATCATaGAGTAAAGGCATGGATGTT +
Preference number: 5 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLTDWGS*SKGMDV
Trigger: AACATCCATGCCTTTACTCAATGATCCCCAGTCTGT...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCGCAGATGTGATACGCTaGCTCATGTCCTCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: LQERDRYMNSISFFQGSCADVIR*LMSSLP
Trigger: GGGCAAAGAGGACATGAGCAAGCGTATCACATCTGC...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGAAGTCCTGCATGGCTATaGGCTACAGCCCAGCAGCCT +
Preference number: 5 (lower is better)
Translates to: ALYNVTATLHTDVAFASGSPAWL*ATAQQP
Trigger: AGGCTGCTGGGCTGTAGCCAATAGCCATGCAGGACT...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCAGGCATGTGGCTTACATaGTTGAATGAGGAAGCAGCA +
Preference number: 5 (lower is better)
Translates to: KMATHRQYGAVQTAQAEPGMWLT*LNEEAA
Trigger: TGCTGCTTCCTCATTCAACAATGTAAGCCACATGCC...TGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGTGGGTAGGACCTCCCTaGTGGTTGCCACGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWWVGPP*WLPRWW
Trigger: CCACCAGCGTGGCAACCACAAGGGAGGTCCTACCCA...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCGGGACCAGAACAAGTTaGTGGACAGGCATAATGTAT +
Preference number: 5 (lower is better)
Translates to: SLVVATLVAEAKEFSMIAGTRTS*WTGIMY
Trigger: ATACATTATGCCTGTCCACAAACTTGTTCTGGTCCC...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS CCA 90 bp AAGCGCATCTTTTGGCCCTTCCTGAGAAAGATCAAAGACTTGCCGTaGATTCAGGTACCACATGAACATCTGCAGGACTTTGGTTCCCTG +
Preference number: 5 (lower is better)
Translates to: KRIFWPFLRKIKDLP*IQVPHEHLQDFGSL
Trigger: CAGGGAACCAAAGTCCTGCAGATGTTCATGTGGTACCTGAATCCACGGCAAGTCTTTGATCTTTCTCAGGAAGGGCCAAAAGATGCGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS CCA 90 bp GAAAACATTCAGAGGGAGCTTACATACGCCATCTTCAAGTTCTTCTaGAGGCAAGTCGGGGTTTCTTTCCACATGGAGGTTCCAGCGATC +
Preference number: 5 (lower is better)
Translates to: ENIQRELTYAIFKFF*RQVGVSFHMEVPAI
Trigger: GATCGCTGGAACCTCCATGTGGAAAGAAACCCCGACTTGCCTCCAGAAGAACTTGAAGATGGCGTATGTAAGCTCCCTCTGAATGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS CCA 90 bp CTGTTACACTCCTACGTAGTCCCGAATGAAAACCGATTTCCCAGTTaGGCATTCTCTCCAGGCACATTTCAACGGTCTGCATCACAACTG +
Preference number: 5 (lower is better)
Translates to: LLHSYVVPNENRFPS*AFSPGTFQRSASQL
Trigger: CAGTTGTGATGCAGACCGTTGAAATGTGCCTGGAGAGAATGCCCAACTGGGAAATCGGTTTTCATTCGGGACTACGTAGGAGTGTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494390.5
CDS-3UTR CAA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGGGCCTGCCCGGGAGATaGCTTTCCTGTACGAGACCT +
Preference number: 5 (lower is better)
Translates to: LEGLQTILWSSKTECKEKGLPGR*LSCTRP
Trigger: AGGTCTCGTACAGGAAAGCAATCTCCCGGGCAGGCC...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CAA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGGTACAAAATTTTCTCTaGGTGACCTTGAGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLVQNFL*VTLSLL
Trigger: AAGGAGGCTCAAGGTCACCAAGAGAAAATTTTGTAC...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTTGTCCCATCTTCCACTaGACACAGGATCTTAGAAAC +
Preference number: 5 (lower is better)
Translates to: KAKMATHRQYGAVQTAQACPIFH*TQDLRN
Trigger: GTTTCTAAGATCCTGTGTCAAGTGGAAGATGGGACA...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCATCCATGGCCCCCAACTaGCAGGGCTGCCAAAGAGGC +
Preference number: 5 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPSMAPN*QGCQRG
Trigger: GCCTCTTTGGCAGCCCTGCAAGTTGGGGGCCATGGA...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCCTGCTGTGCTCTTTCTaGAGGTGTCTTACCCTTGGA +
Preference number: 5 (lower is better)
Translates to: LQERDRYMNSISFFQGSCLLCSF*RCLTLG
Trigger: TCCAAGGGTAAGACACCTCAAGAAAGAGCACAGCAG...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCTTGCTCATGTCCTCTTaGCCCGAATACCAGGGTCAA +
Preference number: 5 (lower is better)
Translates to: LQERDRYMNSISFFQGSCLLMSS*PEYQGQ
Trigger: TTGACCCTGGTATTCGGGCAAAGAGGACATGAGCAA...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCCCCACACAGGATTATTaGCTCTGCAATTTAAACAGC +
Preference number: 5 (lower is better)
Translates to: SLVVATLVAEAKEFSMIAPTQDY*LCNLNS
Trigger: GCTGTTTAAATTGCAGAGCAAATAATCCTGTGTGGG...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCATGTCATCACATTTCCTaGACAGTCCCGCCAACTAAA +
Preference number: 5 (lower is better)
Translates to: KMATHRQYGAVQTAQAEPCHHIS*TVPPTK
Trigger: TTTAGTTGGCGGGACTGTCAAGGAAATGTGATGACA...TGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TCCCTTGTGGTTGCCACGCTGGTGGCAGAAGCCAAAGAGTTTTCCATGATTGCCGGAGGTGGTTTAATGTaGAAGCCATTAAACATGTGG +
Preference number: 5 (lower is better)
Translates to: SLVVATLVAEAKEFSMIAGGGLM*KPLNMW
Trigger: CCACATGTTTAATGGCTTCAACATTAAACCACCTCC...GGCAATCATGGAAAACTCTTTGGCTTCTGCCACCAGCGTGGCAACCACAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCTCCTGGGAGAGGAGGTaGTCCAAGGGCATGACTCTT +
Preference number: 5 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSSWERR*SKGMTL
Trigger: AAGAGTCATGCCCTTGGACAACCTCCTCTCCCAGGA...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCAACAATAAAGCCTTGGTaGAATTTCCAGCCCATGCTG +
Preference number: 5 (lower is better)
Translates to: KMATHRQYGAVQTAQAEPTIKPW*NFQPML
Trigger: CAGCATGGGCTGGAAATTCAACCAAGGCTTTATTGT...TGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGCTCCATGCCTCTGTATaGGCAGAGGATATAGAATTT +
Preference number: 5 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLLHASV*AEDIEF
Trigger: AAATTCTATATCCTCTGCCAATACAGAGGCATGGAG...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCAGGCCTGCCCGGGAGATaGCTTTCCTGTACGAGACCT +
Preference number: 5 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPGLPGR*LSCTRP
Trigger: AGGTCTCGTACAGGAAAGCAATCTCCCGGGCAGGCC...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CAA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGTCGCTCTGGGCTCCTaGGCTGGACCATTTGCCACA +
Preference number: 5 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVVALGS*AGPFAT
Trigger: TGTGGCAAATGGTCCAGCCAAGGAGCCCAGAGCGAC...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS-3UTR CAA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCAAGGTCTCCCGAGACGTaGGTCTCCAGCCACAGGTGT +
Preference number: 5 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPRSPET*VSSHRC
Trigger: ACACCTGTGGCTGGAGACCAACGTCTCGGGAGACCT...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCAGTACAAAATTTTCTCTaGGTGACCTTGAGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: KMATHRQYGAVQTAQAEPVQNFL*VTLSLL
Trigger: AAGGAGGCTCAAGGTCACCAAGAGAAAATTTTGTAC...TGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp GTCAGCCAAGCTAGCTGCCTCTTCAGTGCTGTCTCAGTAGGCTTTGTAGAAATGTCTTCTTCTTCCGATTaGAAGCCTTCAGGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: VSQASCLFSAVSVGFVEMSSSSD*KPSGSS
Trigger: AGAACTCCCTGAAGGCTTCAAATCGGAAGAAGAAGA...CATTTCTACAAAGCCTACTGAGACAGCACTGAAGAGGCAGCTAGCTTGGCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGCTCCCCATCCACTaGCATGGGGATGGATTTGTA +
Preference number: 5 (lower is better)
Translates to: GRFLQERDRYMNSISFFQGLPIH*HGDGFV
Trigger: TACAAATCCATCCCCATGCAAGTGGATGGGGAGCCC...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGAATGGATGTTCTCCTCTaGCTCTTCTGTACCATGTTG +
Preference number: 5 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLRMDVLL*LFCTML
Trigger: CAACATGGTACAGAAGAGCAAGAGGAGAACATCCAT...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTGAACCATCTTGTAAACTGATTTaGTTCACCCGGATCCTCAGA +
Preference number: 5 (lower is better)
Translates to: KMATHRQYGAVQTAQAEPSCKLI*FTRILR
Trigger: TCTGAGGATCCGGGTGAACAAAATCAGTTTACAAGA...TGGTTCAGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCGGCCTTCAGACAATCTaGTGGTCTTCCAAGACTGAA +
Preference number: 5 (lower is better)
Translates to: LQERDRYMNSISFFQGSCGLQTI*WSSKTE
Trigger: TTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCC...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCAGCGATCAGCAGAAGTaGCATCTAGGAAGCACCACC +
Preference number: 5 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSSDQQK*HLGSTT
Trigger: GGTGGTGCTTCCTAGATGCAACTTCTGCTGATCGCT...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424189.6
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGATGTCATCACATTTCCTaGACAGTCCCGCCAACTAAA +
Preference number: 5 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLRCHHIS*TVPPTK
Trigger: TTTAGTTGGCGGGACTGTCAAGGAAATGTGATGACA...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AAGGCAAAGATGGCTACACATAGGCAGTACGGAGCTGTACAGACAGCCCAAGCTTCAGGAGCCATTTGGTaGCATATAGAAGGTACAACA +
Preference number: 5 (lower is better)
Translates to: KAKMATHRQYGAVQTAQASGAIW*HIEGTT
Trigger: TGTTGTACCTTCTATATGCAACCAAATGGCTCCTGA...AGCTTGGGCTGTCTGTACAGCTCCGTACTGCCTATGTGTAGCCATCTTTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS TCA 90 bp GGAGTTTCTCCTTGTCATAGTGGAATCCTTCATAGTCTTGTAAACTaGTTTTGTTCACCCGGATCCTCAGACGATCTGGGACAGACTGGG +
Preference number: 5 (lower is better)
Translates to: GVSPCHSGILHSLVN*FCSPGSSDDLGQTG
Trigger: CCCAGTCTGTCCCAGATCGTCTGAGGATCCGGGTGAACAAAATCAGTTTACAAGACTATGAAGGATTCCACTATGACAAGGAGAAACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000460662.2
ENST00000614521.2
CDS GCA 90 bp CCGATTTCCCAGTTGGGCATTCTCTCCAGGCACATTTCAACGGTCTaGATCACAACTGCAGAAACCTCATCTTTTTCTTCTGTTTTACCG +
Preference number: 5 (lower is better)
Translates to: PISQLGILSRHISTV*ITTAETSSFSSVLP
Trigger: CGGTAAAACAGAAGAAAAAGATGAGGTTTCTGCAGTTGTGATGCAGACCGTTGAAATGTGCCTGGAGAGAATGCCCAACTGGGAAATCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494390.5
CDS CCA 90 bp AGCTTTGGCAGTGAAACCAGAAGGACTCAGCCTGTGAGGGAAGGTTaGTTTGTCTCCAACTCGAACTGGGAAATACCTTCTAATAAGATG +
Preference number: 5 (lower is better)
Translates to: SFGSETRRTQPVREG*FVSNSNWEIPSNKM
Trigger: CATCTTATTAGAAGGTATTTCCCAGTTCGAGTTGGAGACAAACCAACCTTCCCTCACAGGCTGAGTCCTTCTGGTTTCACTGCCAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475388.1
CDS-3UTR CAA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCTCTTCTTCTTCCGATTaGAAGCCTTCAGGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: LQERDRYMNSISFFQGSCSSSSD*KPSGSS
Trigger: AGAACTCCCTGAAGGCTTCAAATCGGAAGAAGAAGA...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCATTCAAGCGCATCTTTaGGCCCTTCCTGAGAAAGAT +
Preference number: 5 (lower is better)
Translates to: LQERDRYMNSISFFQGSCIQAHL*ALPEKD
Trigger: ATCTTTCTCAGGAAGGGCCAAAAGATGCGCTTGAAT...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTTGCCAGAATTCGCAGATTaGGTACTTTCCTATACAATT +
Preference number: 5 (lower is better)
Translates to: SCPIAGRADVIRLLMSSLPEFAD*VLSYTI
Trigger: AATTGTATAGGAAAGTACCAAATCTGCGAATTCTGG...CAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGGGGCTCCCCATCCACTaGCATGGGGATGGATTTGTA +
Preference number: 5 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWGLPIH*HGDGFV
Trigger: TACAAATCCATCCCCATGCAAGTGGATGGGGAGCCC...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCGGGCTCCCCATCCACTaGCATGGGGATGGATTTGTA +
Preference number: 5 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVGLPIH*HGDGFV
Trigger: TACAAATCCATCCCCATGCAAGTGGATGGGGAGCCC...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCATGGATGTTCTCCTCTaGCTCTTCTGTACCATGTTG +
Preference number: 5 (lower is better)
Translates to: LQERDRYMNSISFFQGSCMDVLL*LFCTML
Trigger: CAACATGGTACAGAAGAGCAAGAGGAGAACATCCAT...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCTTGCTCATGTCCTCTTaGCCCGAATACCAGGGTCAA +
Preference number: 5 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSLLMSS*PEYQGQ
Trigger: TTGACCCTGGTATTCGGGCAAAGAGGACATGAGCAA...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCGGCTATCATGTTCTGTaGTACATCTTGGTAGCCCTT +
Preference number: 5 (lower is better)
Translates to: LQERDRYMNSISFFQGSCGYHVL*YILVAL
Trigger: AAGGGCTACCAAGATGTACAACAGAACATGATAGCC...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGGCAACATAAACAATTACAGGAACTCTTGGTCATGAATTTTATGACACAGGTACACCGCACCGGGGCATaGTGGGAAACTCCGCTCACT +
Preference number: 5 (lower is better)
Translates to: RQHKQLQELLVMNFMTQVHRTGA*WETPLT
Trigger: AGTGAGCGGAGTTTCCCACAATGCCCCGGTGCGGTG...TACCTGTGTCATAAAATTCATGACCAAGAGTTCCTGTAATTGTTTATGTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614521.2
CDS-3UTR CAA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCCCGCAGGTCCGCAGTTaGCACCTGATGAATATCATT +
Preference number: 5 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSPQVRS*HLMNII
Trigger: AATGATATTCATCAGGTGCAAACTGCGGACCTGCGG...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424189.6
CDS-3UTR CAA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGAGCGATCAGCAGAAGTaGCATCTAGGAAGCACCACC +
Preference number: 5 (lower is better)
Translates to: QVCTALHQSLLISITVHLSDQQK*HLGSTT
Trigger: GGTGGTGCTTCCTAGATGCAACTTCTGCTGATCGCT...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGATTTGCTGAGACTATTTaGGCCCCTGACTTTTCAAAG +
Preference number: 5 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLRFAETI*APDFSK
Trigger: CTTTGAAAAGTCAGGGGCCAAAATAGTCTCAGCAAA...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGATGCCACAGCTGCTACTaGTTTATGGATTCCACCTGC +
Preference number: 5 (lower is better)
Translates to: ALYNVTATLHTDVAFASGCHSCY*FMDSTC
Trigger: GCAGGTGGAATCCATAAACAAGTAGCAGCTGTGGCA...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCTGCCACAGCTGCTACTaGTTTATGGATTCCACCTGC +
Preference number: 5 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSCHSCY*FMDSTC
Trigger: GCAGGTGGAATCCATAAACAAGTAGCAGCTGTGGCA...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS GCA 90 bp TCTCCACGCACAACTAGAATACCCAGAGGTATCGCTCCAAATGACTaGACTAGTTCCCCAGCAATGGTTCTTAACCAGTCTGAAATAGAA +
Preference number: 5 (lower is better)
Translates to: SPRTTRIPRGIAPND*TSSPAMVLNQSEIE
Trigger: TTCTATTTCAGACTGGTTAAGAACCATTGCTGGGGAACTAGTGCAGTCATTTGGAGCGATACCTCTGGGTATTCTAGTTGTGCGTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288490.9
ENST00000453654.6
CDS-3UTR CAA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCGTACAAAATTTTCTCTaGGTGACCTTGAGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: LQERDRYMNSISFFQGSCVQNFL*VTLSLL
Trigger: AAGGAGGCTCAAGGTCACCAAGAGAAAATTTTGTAC...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGTGGAAGGAGAACTTTaGCTGGAAGCCCTTACCACA +
Preference number: 5 (lower is better)
Translates to: GRFLQERDRYMNSISFFQVEGEL*LEALTT
Trigger: TGTGGTAAGGGCTTCCAGCAAAAGTTCTCCTTCCAC...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGAACATCTGCAGGACTTaGGTTCCCTGGTTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: LEGLQTILWSSKTECKEKNICRT*VPWLPP
Trigger: TGGAGGCAACCAGGGAACCAAAGTCCTGCAGATGTT...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCTCTTGTAAACTGATTTaGTTCACCCGGATCCTCAGA +
Preference number: 5 (lower is better)
Translates to: LQERDRYMNSISFFQGSCSCKLI*FTRILR
Trigger: TCTGAGGATCCGGGTGAACAAAATCAGTTTACAAGA...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGCTGCTGTGCTCTTTCTaGAGGTGTCTTACCCTTGGA +
Preference number: 5 (lower is better)
Translates to: QVCTALHQSLLISITVHLLLCSF*RCLTLG
Trigger: TCCAAGGGTAAGACACCTCAAGAAAGAGCACAGCAG...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCGGCCTTCAGACAATCTaGTGGTCTTCCAAGACTGAA +
Preference number: 5 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSGLQTI*WSSKTE
Trigger: TTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCC...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CTCAAATCACATATTCCTAATCACAACACCCCTCAGAGTGGTCAGGTATCCTCTGAACAAAGGGATGCCTaGACTGTGGATGTGATACTC +
Preference number: 5 (lower is better)
Translates to: LKSHIPNHNTPQSGQVSSEQRDA*TVDVIL
Trigger: GAGTATCACATCCACAGTCAAGGCATCCCTTTGTTC...AGAGGATACCTGACCACTCTGAGGGGTGTTGTGATTAGGAATATGTGATTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS CCA 90 bp TTACATCTGAAATTAATCTTTTCTAGCTGCTCAATGCAGGCGGTGTaGACGACGATTTTACAGACTGCACACTTCCTCCTGAGAGCTGAT +
Preference number: 5 (lower is better)
Translates to: LHLKLIFSSCSMQAV*TTILQTAHFLLRAD
Trigger: ATCAGCTCTCAGGAGGAAGTGTGCAGTCTGTAAAATCGTCGTCCACACCGCCTGCATTGAGCAGCTAGAAAAGATTAATTTCAGATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CTCAAATCACATATTCCTAATCACAACACCCCTCAGAGTGGTCAGGTATCCTCTAGAAAGATCAAAGACTaGCCGTGGATTCAGGTACCA +
Preference number: 5 (lower is better)
Translates to: LKSHIPNHNTPQSGQVSSRKIKD*PWIQVP
Trigger: TGGTACCTGAATCCACGGCAAGTCTTTGATCTTTCT...AGAGGATACCTGACCACTCTGAGGGGTGTTGTGATTAGGAATATGTGATTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCATTCAAGCGCATCTTTaGGCCCTTCCTGAGAAAGAT +
Preference number: 5 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSIQAHL*ALPEKD
Trigger: ATCTTTCTCAGGAAGGGCCAAAAGATGCGCTTGAAT...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCTGTCCCATCTTCCACTaGACACAGGATCTTAGAAAC +
Preference number: 5 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSCPIFH*TQDLRN
Trigger: GTTTCTAAGATCCTGTGTCAAGTGGAAGATGGGACA...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCATGGATGTTCTCCTCTaGCTCTTCTGTACCATGTTG +
Preference number: 5 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSMDVLL*LFCTML
Trigger: CAACATGGTACAGAAGAGCAAGAGGAGAACATCCAT...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCACAGACTGGGGATCATaGAGTAAAGGCATGGATGTT +
Preference number: 5 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSTDWGS*SKGMDV
Trigger: AACATCCATGCCTTTACTCAATGATCCCCAGTCTGT...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGGGAGCTGCTTACTGCCTGCAAAATaGCATGATCTTCTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: LQERDRYMNSISFFQGSCLLPAK*HDLLKR
Trigger: TCTCTTCAGAAGATCATGCAATTTTGCAGGCAGTAA...GCAGCTCCCCTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGCTGCTGTGCTCTTTCTaGAGGTGTCTTACCCTTGGA +
Preference number: 5 (lower is better)
Translates to: LEGLQTILWSSKTECKEKLLCSF*RCLTLG
Trigger: TCCAAGGGTAAGACACCTCAAGAAAGAGCACAGCAG...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCGGCTATCATGTTCTGTaGTACATCTTGGTAGCCCTT +
Preference number: 5 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSGYHVL*YILVAL
Trigger: AAGGGCTACCAAGATGTACAACAGAACATGATAGCC...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCAGCGATCAGCAGAAGTaGCATCTAGGAAGCACCACC +
Preference number: 5 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTSDQQK*HLGSTT
Trigger: GGTGGTGCTTCCTAGATGCAACTTCTGCTGATCGCT...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTTGCTTGGCCAAACATTaGACTCAATCCAGGGAATGG +
Preference number: 5 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVCLAKH*TQSREW
Trigger: CCATTCCCTGGATTGAGTCAAATGTTTGGCCAAGCA...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGATTTTCTCTGGGCTACTaGGAAGTATTTAGAGAAATG +
Preference number: 5 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLRFSLGY*EVFREM
Trigger: CATTTCTCTAAATACTTCCAAGTAGCCCAGAGAAAA...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCAGGCATGTGGCTTACATaGTTGAATGAGGAAGCAGCA +
Preference number: 5 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPGMWLT*LNEEAA
Trigger: TGCTGCTTCCTCATTCAACAATGTAAGCCACATGCC...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGTAGTAGGCAGAAAGTTCAGGGACAGGACTGCCGCTATGGCCCAAAACTTAGACCCCTTGAAGCCACTTaGAACAAATTTAATCTTTCT +
Preference number: 5 (lower is better)
Translates to: SSRQKVQGQDCRYGPKLRPLEAT*NKFNLS
Trigger: AGAAAGATTAAATTTGTTCAAAGTGGCTTCAAGGGG...TCTAAGTTTTGGGCCATAGCGGCAGTCCTGTCCCTGAACTTTCTGCCTACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCGGGACCAGAACAAGTTaGTGGACAGGCATAATGTAT +
Preference number: 5 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSGTRTS*WTGIMY
Trigger: ATACATTATGCCTGTCCACAAACTTGTTCTGGTCCC...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGTTTTGCAAATCTGACTaGGCAGTTCTCCTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: GRFLQERDRYMNSISFFQFCKSD*AVLLSK
Trigger: CTTGGAGAGGAGAACTGCCAAGTCAGATTTGCAAAA...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGTGGAAGGAGAACTTTaGCTGGAAGCCCTTACCACA +
Preference number: 5 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVVEGEL*LEALTT
Trigger: TGTGGTAAGGGCTTCCAGCAAAAGTTCTCCTTCCAC...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCATCTTCTTCTTCCGATTaGAAGCCTTCAGGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPSSSSD*KPSGSS
Trigger: AGAACTCCCTGAAGGCTTCAAATCGGAAGAAGAAGA...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGACAAAAGGACGACCTTaGTTTTCCTGTTCCATCCCT +
Preference number: 5 (lower is better)
Translates to: GRFLQERDRYMNSISFFQTKGRP*FSCSIP
Trigger: AGGGATGGAACAGGAAAACAAAGGTCGTCCTTTTGT...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGTGTCCCATCTTCCACTaGACACAGGATCTTAGAAAC +
Preference number: 5 (lower is better)
Translates to: GRFLQERDRYMNSISFFQCPIFH*TQDLRN
Trigger: GTTTCTAAGATCCTGTGTCAAGTGGAAGATGGGACA...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGATGGATGTTCTCCTCTaGCTCTTCTGTACCATGTTG +
Preference number: 5 (lower is better)
Translates to: GRFLQERDRYMNSISFFQMDVLL*LFCTML
Trigger: CAACATGGTACAGAAGAGCAAGAGGAGAACATCCAT...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCTCTTGTAAACTGATTTaGTTCACCCGGATCCTCAGA +
Preference number: 5 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSSCKLI*FTRILR
Trigger: TCTGAGGATCCGGGTGAACAAAATCAGTTTACAAGA...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGTTGCTCATGTCCTCTTaGCCCGAATACCAGGGTCAA +
Preference number: 5 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVLLMSS*PEYQGQ
Trigger: TTGACCCTGGTATTCGGGCAAAGAGGACATGAGCAA...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCATTGCTCATGTCCTCTTaGCCCGAATACCAGGGTCAA +
Preference number: 5 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPLLMSS*PEYQGQ
Trigger: TTGACCCTGGTATTCGGGCAAAGAGGACATGAGCAA...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTGTCTCAGGTAGATTCTaGCAGGAGAGAGACAGATAT +
Preference number: 5 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVVSGRF*QERDRY
Trigger: ATATCTGTCTCTCTCCTGCAAGAATCTACCTGAGAC...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCAGTCTCAGGTAGATTCTaGCAGGAGAGAGACAGATAT +
Preference number: 5 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPVSGRF*QERDRY
Trigger: ATATCTGTCTCTCTCCTGCAAGAATCTACCTGAGAC...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCGGCCTTCAGACAATCTaGTGGTCTTCCAAGACTGAA +
Preference number: 5 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVGLQTI*WSSKTE
Trigger: TTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCC...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCTGCTTGGCCAAACATTaGACTCAATCCAGGGAATGG +
Preference number: 5 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVCLAKH*TQSREW
Trigger: CCATTCCCTGGATTGAGTCAAATGTTTGGCCAAGCA...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGGCAACATAAACAATTACAGGAACTCTTGGTCATGAATTTTATGACACAGGTATCCTGGGAGAGGAGGTaGTCCAAGGGCATGACTCTT +
Preference number: 5 (lower is better)
Translates to: RQHKQLQELLVMNFMTQVSWERR*SKGMTL
Trigger: AAGAGTCATGCCCTTGGACAACCTCCTCTCCCAGGA...TACCTGTGTCATAAAATTCATGACCAAGAGTTCCTGTAATTGTTTATGTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCTGGTACAATAAAGCCTaGGTTGAATTTCCAGCCCAT +
Preference number: 5 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSWYNKA*VEFPAH
Trigger: ATGGGCTGGAAATTCAACCAAGGCTTTATTGTACCA...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp GCCCTTTATAATGTGACTGCAACTCTTCATACAGATGTAGCCTTTGCGAGTGGAAAACCACCTCGTCCTTaGGAAAGCTCCATTAAAAAG +
Preference number: 5 (lower is better)
Translates to: ALYNVTATLHTDVAFASGKPPRP*ESSIKK
Trigger: CTTTTTAATGGAGCTTTCCAAAGGACGAGGTGGTTT...TCCACTCGCAAAGGCTACATCTGTATGAAGAGTTGCAGTCACATTATAAAGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGGAGATCAGGAGCCATTaGGTTGCATATAGAAGGTAC +
Preference number: 5 (lower is better)
Translates to: QVCTALHQSLLISITVHLEIRSH*VAYRRY
Trigger: GTACCTTCTATATGCAACCAAATGGCTCCTGATCTC...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGGAGATCAGGAGCCATTaGGTTGCATATAGAAGGTAC +
Preference number: 5 (lower is better)
Translates to: GRFLQERDRYMNSISFFQEIRSH*VAYRRY
Trigger: GTACCTTCTATATGCAACCAAATGGCTCCTGATCTC...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGTTTTGCAAATCTGACTaGGCAGTTCTCCTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: LEGLQTILWSSKTECKEKFCKSD*AVLLSK
Trigger: CTTGGAGAGGAGAACTGCCAAGTCAGATTTGCAAAA...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATGTGGAAGGAGAACTTTaGCTGGAAGCCCTTACCACA +
Preference number: 5 (lower is better)
Translates to: VRESIKVLLALEIMLVCNVEGEL*LEALTT
Trigger: TGTGGTAAGGGCTTCCAGCAAAAGTTCTCCTTCCAC...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGAGAAAGATCAAAGACTaGCCGTGGATTCAGGTACCA +
Preference number: 5 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWRKIKD*PWIQVP
Trigger: TGGTACCTGAATCCACGGCAAGTCTTTGATCTTTCT...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGATGGATGTTCTCCTCTaGCTCTTCTGTACCATGTTG +
Preference number: 5 (lower is better)
Translates to: LEGLQTILWSSKTECKEKMDVLL*LFCTML
Trigger: CAACATGGTACAGAAGAGCAAGAGGAGAACATCCAT...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp ATTCCTCAGAGATATAGCACACAAGTTGACATTATCCATGTGGCACTTCCCAGCTTACTGCCTGCAAAATaGCATGATCTTCTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: IPQRYSTQVDIIHVALPSLLPAK*HDLLKR
Trigger: TCTCTTCAGAAGATCATGCAATTTTGCAGGCAGTAA...GCTGGGAAGTGCCACATGGATAATGTCAACTTGTGTGCTATATCTCTGAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGGTCTCAGGTAGATTCTaGCAGGAGAGAGACAGATAT +
Preference number: 5 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWVSGRF*QERDRY
Trigger: ATATCTGTCTCTCTCCTGCAAGAATCTACCTGAGAC...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGGGCTATCATGTTCTGTaGTACATCTTGGTAGCCCTT +
Preference number: 5 (lower is better)
Translates to: LEGLQTILWSSKTECKEKGYHVL*YILVAL
Trigger: AAGGGCTACCAAGATGTACAACAGAACATGATAGCC...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CTCCTAGACCATAAGGCCTTAGCTCTTTCCAAAGCCCAGGACCAATTTTTAAAAGATATAGCACACAAGTaGACATTATCCATGTGGCAC +
Preference number: 5 (lower is better)
Translates to: LLDHKALALSKAQDQFLKDIAHK*TLSMWH
Trigger: GTGCCACATGGATAATGTCAACTTGTGTGCTATATC...TTTTAAAAATTGGTCCTGGGCTTTGGAAAGAGCTAAGGCCTTATGGTCTAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTGGAGGTGGTTTAATGTaGAAGCCATTAAACATGTGG +
Preference number: 5 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVGGGLM*KPLNMW
Trigger: CCACATGTTTAATGGCTTCAACATTAAACCACCTCC...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGACAATAAAGCCTTGGTaGAATTTCCAGCCCATGCTG +
Preference number: 5 (lower is better)
Translates to: LEGLQTILWSSKTECKEKTIKPW*NFQPML
Trigger: CAGCATGGGCTGGAAATTCAACCAAGGCTTTATTGT...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCAAAACCACCTCGTCCTTaGGAAAGCTCCATTAAAAAG +
Preference number: 5 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPKPPRP*ESSIKK
Trigger: CTTTTTAATGGAGCTTTCCAAAGGACGAGGTGGTTT...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGTTTGCTGAGACTATTTaGGCCCCTGACTTTTCAAAG +
Preference number: 5 (lower is better)
Translates to: QVCTALHQSLLISITVHLFAETI*APDFSK
Trigger: CTTTGAAAAGTCAGGGGCCAAAATAGTCTCAGCAAA...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGTTTTGCAAATCTGACTaGGCAGTTCTCCTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVFCKSD*AVLLSK
Trigger: CTTGGAGAGGAGAACTGCCAAGTCAGATTTGCAAAA...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCAACAAAAGGACGACCTTaGTTTTCCTGTTCCATCCCT +
Preference number: 5 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPTKGRP*FSCSIP
Trigger: AGGGATGGAACAGGAAAACAAAGGTCGTCCTTTTGT...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGAGAAAGATCAAAGACTaGCCGTGGATTCAGGTACCA +
Preference number: 5 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVRKIKD*PWIQVP
Trigger: TGGTACCTGAATCCACGGCAAGTCTTTGATCTTTCT...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCAAGAAAGATCAAAGACTaGCCGTGGATTCAGGTACCA +
Preference number: 5 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPRKIKD*PWIQVP
Trigger: TGGTACCTGAATCCACGGCAAGTCTTTGATCTTTCT...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TCATACAACAAGCCTTTGTTCTTGGGTCAAGGATTACTTGGAGTAATGAAAACCAGAAAGATCAAAGACTaGCCGTGGATTCAGGTACCA +
Preference number: 5 (lower is better)
Translates to: SYNKPLFLGQGLLGVMKTRKIKD*PWIQVP
Trigger: TGGTACCTGAATCCACGGCAAGTCTTTGATCTTTCT...GGTTTTCATTACTCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGATTCAAGCGCATCTTTaGGCCCTTCCTGAGAAAGAT +
Preference number: 5 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVIQAHL*ALPEKD
Trigger: ATCTTTCTCAGGAAGGGCCAAAAGATGCGCTTGAAT...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCAATTCAAGCGCATCTTTaGGCCCTTCCTGAGAAAGAT +
Preference number: 5 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPIQAHL*ALPEKD
Trigger: ATCTTTCTCAGGAAGGGCCAAAAGATGCGCTTGAAT...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGACAGACTGGGGATCATaGAGTAAAGGCATGGATGTT +
Preference number: 5 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVTDWGS*SKGMDV
Trigger: AACATCCATGCCTTTACTCAATGATCCCCAGTCTGT...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCAACAGACTGGGGATCATaGAGTAAAGGCATGGATGTT +
Preference number: 5 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPTDWGS*SKGMDV
Trigger: AACATCCATGCCTTTACTCAATGATCCCCAGTCTGT...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGTCTTGTAAACTGATTTaGTTCACCCGGATCCTCAGA +
Preference number: 5 (lower is better)
Translates to: LEGLQTILWSSKTECKEKSCKLI*FTRILR
Trigger: TCTGAGGATCCGGGTGAACAAAATCAGTTTACAAGA...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGGATATAGCACACAAGTaGACATTATCCATGTGGCAC +
Preference number: 5 (lower is better)
Translates to: LEGLQTILWSSKTECKEKDIAHK*TLSMWH
Trigger: GTGCCACATGGATAATGTCAACTTGTGTGCTATATC...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCGATATAGCACACAAGTaGACATTATCCATGTGGCAC +
Preference number: 5 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVDIAHK*TLSMWH
Trigger: GTGCCACATGGATAATGTCAACTTGTGTGCTATATC...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGACAGTGTAAAACCAAAGATGGCCCTCAGCAGTGTAAAATCTATAACCTAGTCAACAAGCCTTTGTTCTaGGGTCAAGGATTACTTGGA +
Preference number: 5 (lower is better)
Translates to: RQCKTKDGPQQCKIYNLVNKPLF*GQGLLG
Trigger: TCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTT...GACTAGGTTATAGATTTTACACTGCTGAGGGCCATCTTTGGTTTTACACTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp GGTAGATTCTTGCAGGAGAGAGACAGATATATGAATTCCATCAGCTTCTTCCAGTCATACAACAAGCCTTaGTTCTTGGGTCAAGGATTA +
Preference number: 5 (lower is better)
Translates to: GRFLQERDRYMNSISFFQSYNKP*FLGQGL
Trigger: TAATCCTTGACCCAAGAACAAAGGCTTGTTGTATGA...CTGGAAGAAGCTGATGGAATTCATATATCTGTCTCTCTCCTGCAAGAATCTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTAACTTGCACTGGTTTTaGGTTATCACATCTACAGAG +
Preference number: 5 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVNLHWF*VITSTE
Trigger: CTCTGTAGATGTGATAACCAAAAACCAGTGCAAGTT...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCATCCATCACTGTGCATTaGCCAGCTAAATTATGTTTC +
Preference number: 5 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPSITVH*PAKLCF
Trigger: GAAACATAATTTAGCTGGCAAATGCACAGTGATGGA...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGTATATACATACATACTaGTGCATGAACGGATGGGGT +
Preference number: 5 (lower is better)
Translates to: QVCTALHQSLLISITVHLYIHTY*CMNGWG
Trigger: ACCCCATCCGTTCATGCACAAGTATGTATGTATATA...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGCTGCAGCACTATCATTaGCTATATGAATCTGCACAG +
Preference number: 5 (lower is better)
Translates to: LEGLQTILWSSKTECKEKLQHYH*LYESAQ
Trigger: CTGTGCAGATTCATATAGCAAATGATAGTGCTGCAG...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGTCAGGAGCCATTTGGTaGCATATAGAAGGTACAACA +
Preference number: 5 (lower is better)
Translates to: LEGLQTILWSSKTECKEKSGAIW*HIEGTT
Trigger: TGTTGTACCTTCTATATGCAACCAAATGGCTCCTGA...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CTCAAATCACATATTCCTAATCACAACACCCCTCAGAGTGGTCAGGTATCCTCTCCCAAATTAACTCCATaGAAAATCTCTGTAGTGCAA +
Preference number: 5 (lower is better)
Translates to: LKSHIPNHNTPQSGQVSSPKLTP*KISVVQ
Trigger: TTGCACTACAGAGATTTTCAATGGAGTTAATTTGGG...AGAGGATACCTGACCACTCTGAGGGGTGTTGTGATTAGGAATATGTGATTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCAGTACAAAATTTTCTCTaGGTGACCTTGAGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPVQNFL*VTLSLL
Trigger: AAGGAGGCTCAAGGTCACCAAGAGAAAATTTTGTAC...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CAGGTATGTACGGCTCTCCATCAGTCATTACTAATTTCCATCACTGTGCATTTGCCAGAATTCGCAGATTaGGTACTTTCCTATACAATT +
Preference number: 5 (lower is better)
Translates to: QVCTALHQSLLISITVHLPEFAD*VLSYTI
Trigger: AATTGTATAGGAAAGTACCAAATCTGCGAATTCTGG...CAAATGCACAGTGATGGAAATTAGTAATGACTGATGGAGAGCCGTACATACCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGTTACTGCCTGCAAAATaGCATGATCTTCTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: LEGLQTILWSSKTECKEKLLPAK*HDLLKR
Trigger: TCTCTTCAGAAGATCATGCAATTTTGCAGGCAGTAA...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGCCCACACAGGATTATTaGCTCTGCAATTTAAACAGC +
Preference number: 5 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVPTQDY*LCNLNS
Trigger: GCTGTTTAAATTGCAGAGCAAATAATCCTGTGTGGG...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGAACAAGCCTTTGTTCTaGGGTCAAGGATTACTTGGA +
Preference number: 5 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVNKPLF*GQGLLG
Trigger: TCCAAGTAATCCTTGACCCAAGAACAAAGGCTTGTT...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTTCTGAGGCTGATATATGGAAGTAGATTACTCACAACCCAATCCATCCTCCCATTTTCTCTGGGCTACTaGGAAGTATTTAGAGAAATG +
Preference number: 5 (lower is better)
Translates to: FLRLIYGSRLLTTQSILPFSLGY*EVFREM
Trigger: CATTTCTCTAAATACTTCCAAGTAGCCCAGAGAAAA...TGGGAGGATGGATTGGGTTGTGAGTAATCTACTTCCATATATCAGCCTCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CTCCTAGACCATAAGGCCTTAGCTCTTTCCAAAGCCCAGGACCAATTTTTAAAAGGCATGACTCTTTTCTaGGTTCTTATTTTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: LLDHKALALSKAQDQFLKGMTLF*VLIFRF
Trigger: AAACCTGAAAATAAGAACCAAGAAAAGAGTCATGCC...TTTTAAAAATTGGTCCTGGGCTTTGGAAAGAGCTAAGGCCTTATGGTCTAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp ATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCCTGCAGAATTaGAAACTAACAGTCCTACTT +
Preference number: 5 (lower is better)
Translates to: IFLQDIQKVLEGLQTILWSSLQN*KLTVLL
Trigger: AAGTAGGACTGTTAGTTTCAAATTCTGCAGGGAAGA...CCACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGGACCTGTAGGACTTCTAATCAGCTGAGTATGAGATTCAGAGTGAAAGGAGTTCCCAAATTAACTCCATaGAAAATCTCTGTAGTGCAA +
Preference number: 5 (lower is better)
Translates to: RTCRTSNQLSMRFRVKGVPKLTP*KISVVQ
Trigger: TTGCACTACAGAGATTTTCAATGGAGTTAATTTGGG...AACTCCTTTCACTCTGAATCTCATACTCAGCTGATTAGAAGTCCTACAGGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGTTTTTCTAGTCCAAGATCTCTCACAATTAAAGATATGCCTTTGATCTCTGAGTTTTGCAAATCTGACTaGGCAGTTCTCCTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: SFSSPRSLTIKDMPLISEFCKSD*AVLLSK
Trigger: CTTGGAGAGGAGAACTGCCAAGTCAGATTTGCAAAA...CTCAGAGATCAAAGGCATATCTTTAATTGTGAGAGATCTTGGACTAGAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGTTTTTCTAGTCCAAGATCTCTCACAATTAAAGATATGCCTTTGATCTCTGAGACAAAAGGACGACCTTaGTTTTCCTGTTCCATCCCT +
Preference number: 5 (lower is better)
Translates to: SFSSPRSLTIKDMPLISETKGRP*FSCSIP
Trigger: AGGGATGGAACAGGAAAACAAAGGTCGTCCTTTTGT...CTCAGAGATCAAAGGCATATCTTTAATTGTGAGAGATCTTGGACTAGAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGTTACTGCCTGCAAAATaGCATGATCTTCTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVLLPAK*HDLLKR
Trigger: TCTCTTCAGAAGATCATGCAATTTTGCAGGCAGTAA...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp CTACTTGCTGGAAGCAATAAGGATCAAATTTTGTGGAACTCGTACTGTATTCCATCCATCACTGTGCATTaGCCAGCTAAATTATGTTTC +
Preference number: 5 (lower is better)
Translates to: LLAGSNKDQILWNSYCIPSITVH*PAKLCF
Trigger: GAAACATAATTTAGCTGGCAAATGCACAGTGATGGA...TGGAATACAGTACGAGTTCCACAAAATTTGATCCTTATTGCTTCCAGCAAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TTAGAAGGCCTTCAGACAATCTTGTGGTCTTCCAAGACTGAATGTAAAGAGAAGGGCATGACTCTTTTCTaGGTTCTTATTTTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: LEGLQTILWSSKTECKEKGMTLF*VLIFRF
Trigger: AAACCTGAAAATAAGAACCAAGAAAAGAGTCATGCC...CTTCTCTTTACATTCAGTCTTGGAAGACCACAAGATTGTCTGAAGGCCTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGCCAGAATTCGCAGATTaGGTACTTTCCTATACAATT +
Preference number: 5 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVPEFAD*VLSYTI
Trigger: AATTGTATAGGAAAGTACCAAATCTGCGAATTCTGG...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGTTTTTCTAGTCCAAGATCTCTCACAATTAAAGATATGCCTTTGATCTCTGAGTCTTGTAAACTGATTTaGTTCACCCGGATCCTCAGA +
Preference number: 5 (lower is better)
Translates to: SFSSPRSLTIKDMPLISESCKLI*FTRILR
Trigger: TCTGAGGATCCGGGTGAACAAAATCAGTTTACAAGA...CTCAGAGATCAAAGGCATATCTTTAATTGTGAGAGATCTTGGACTAGAAAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATTATATACATACATACTaGTGCATGAACGGATGGGGT +
Preference number: 5 (lower is better)
Translates to: VRESIKVLLALEIMLVCNYIHTY*CMNGWG
Trigger: ACCCCATCCGTTCATGCACAAGTATGTATGTATATA...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp TATATTTCTGCAGGACATTCAGAAGGTTTTAGAAGGCCTTCAGACAATCTTGTGACATCCATGTGTCCTTaGAGTAAAAGGTATACTTGT +
Preference number: 5 (lower is better)
Translates to: YISAGHSEGFRRPSDNLVTSMCP*SKRYTC
Trigger: ACAAGTATACCTTTTACTCAAAGGACACATGGATGT...CACAAGATTGTCTGAAGGCCTTCTAAAACCTTCTGAATGTCCTGCAGAAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGGCAACATAAACAATTACAGGAACTCTTGGTCATGAATTTTATGACACAGGTATCTTCCCTGCAGAATTaGAAACTAACAGTCCTACTT +
Preference number: 5 (lower is better)
Translates to: RQHKQLQELLVMNFMTQVSSLQN*KLTVLL
Trigger: AAGTAGGACTGTTAGTTTCAAATTCTGCAGGGAAGA...TACCTGTGTCATAAAATTCATGACCAAGAGTTCCTGTAATTGTTTATGTTGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp GTCAGGGAGAGCATCAAAGTTCTACTTGCATTGGAAATTATGCTTGTATGTAATCCCCTTGAAGCCACTTaGAACAAATTTAATCTTTCT +
Preference number: 5 (lower is better)
Translates to: VRESIKVLLALEIMLVCNPLEAT*NKFNLS
Trigger: AGAAAGATTAAATTTGTTCAAAGTGGCTTCAAGGGG...ATTACATACAAGCATAATTTCCAATGCAAGTAGAACTTTGATGCTCTCCCTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS-3UTR CAA 90 bp AGGCAACATAAACAATTACAGGAACTCTTGGTCATGAATTTTATGACACAGGTAACATCCATGTGTCCTTaGAGTAAAAGGTATACTTGT +
Preference number: 5 (lower is better)
Translates to: RQHKQLQELLVMNFMTQVTSMCP*SKRYTC
Trigger: ACAAGTATACCTTTTACTCAAAGGACACATGGATGT...TACCTGTGTCATAAAATTCATGACCAAGAGTTCCTGTAATTGTTTATGTTGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000614521.2
CDS CCA 72 bp CGCCCGTCGCCCCTTTCTCCTCTCCCGCCGAGGAGCTaGGGTTCATGGCGCCCGCTCCGGCGGCCGCGGAGG +
Preference number: 6 (lower is better)
Translates to: RPSPLSPLPPRS*GSWRPLRRPRR
Trigger: CCTCCGCGGCCGCCGGAGCGGGCGCCATGAACCCCAGCTCCTCGGCGGGAGAGGAGAAAGGGGCGACGGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000470895.5
ENST00000614521.2
CDS GCA 72 bp CGCCCAGGCAGCAGCTCCCGGCGCCGCTTCCGCTGCTaGTGCTGCCGCCCGTCGCCCCTTTCTCCTCTCCCG +
Preference number: 6 (lower is better)
Translates to: RPGSSSRRRFRC*CCRPSPLSPLP
Trigger: CGGGAGAGGAGAAAGGGGCGACGGGCGGCAGCAGCAGCAGCGGAAGCGGCGCCGGGAGCTGCTGCCTGGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000470895.5
ENST00000614521.2
CDS GCA 72 bp CGGCGCCCAGGCAGCAGCTCCCGGCGCCGCTTCCGCTaGTGCTGCTGCCGCCCGTCGCCCCTTTCTCCTCTC +
Preference number: 6 (lower is better)
Translates to: RRPGSSSRRRFR*CCCRPSPLSPL
Trigger: GAGAGGAGAAAGGGGCGACGGGCGGCAGCAGCAGCAGCGGAAGCGGCGCCGGGAGCTGCTGCCTGGGCGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000470895.5
ENST00000614521.2
CDS GCA 72 bp GTGACCCCGAGGCTTGTTCCACCACCAGGTCAGGCATaGCCGGAGGTGTCCCCGCCGGCTGTGACACCACCA +
Preference number: 6 (lower is better)
Translates to: VTPRLVPPPGQA*PEVSPPAVTPP
Trigger: TGGTGGTGTCACAGCCGGCGGGGACACCTCCGGGCATGCCTGACCTGGTGGTGGAACAAGCCTCGGGGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453654.6
ENST00000497321.5
CDS GCA 72 bp AGATCCCCGAGGCTTGTTCCACCACCAGGTCAGGCATaGCCGGAGGTGTCCCCGCCGGCTGTGACACCACCA +
Preference number: 6 (lower is better)
Translates to: RSPRLVPPPGQA*PEVSPPAVTPP
Trigger: TGGTGGTGTCACAGCCGGCGGGGACACCTCCGGGCATGCCTGACCTGGTGGTGGAACAAGCCTCGGGGATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000460662.2
ENST00000614521.2
CDS GCA 72 bp AAATGGCAGCCCCTTCCCGCAGCATCCATCCGCGGCTaGACCGCACCGGGGCATTGTGGGAAACTCCGCTCA +
Preference number: 6 (lower is better)
Translates to: KWQPLPAASIRG*TAPGHCGKLRS
Trigger: TGAGCGGAGTTTCCCACAATGCCCCGGTGCGGTGCAGCCGCGGATGGATGCTGCGGGAAGGGGCTGCCATTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424189.6
ENST00000446122.5
ENST00000470895.5
ENST00000614521.2
CDS CCA 72 bp GCATCCACCAGAAGCTGGCACACAGCCCGGTTCCGCTaGCAGGCAGCCTTGTGCAGTGCAGTCTCACCCGTT +
Preference number: 6 (lower is better)
Translates to: ASTRSWHTARFR*QAALCSAVSPV
Trigger: AACGGGTGAGACTGCACTGCACAAGGCTGCCTGCCAGCGGAACCGGGCTGTGTGCCAGCTTCTGGTGGATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000477835.5
ENST00000494390.5
ENST00000497321.5
ENST00000614521.2
CDS CCA 72 bp GCATCCACCAGAAGCTGGCACACAGCCCGGTTCCGCTaGCAGGCAGCCTTGTGCAGTGCAGTCTCACCCCTA +
Preference number: 6 (lower is better)
Translates to: ASTRSWHTARFR*QAALCSAVSPL
Trigger: TAGGGGTGAGACTGCACTGCACAAGGCTGCCTGCCAGCGGAACCGGGCTGTGTGCCAGCTTCTGGTGGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486153.1
CDS CCA 72 bp ACAGGAAGGCTGAGGGGATGTGCAGGAGCCAGATGCTaGAGGCCTGCCCGGGAGATTGCTTTCCTTCGCCCC +
Preference number: 6 (lower is better)
Translates to: TGRLRGCAGARC*RPAREIAFLRP
Trigger: GGGGCGAAGGAAAGCAATCTCCCGGGCAGGCCTCCAGCATCTGGCTCCTGCACATCCCCTCAGCCTTCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483619.1
CDS CAA 72 bp AGCTGGCACACAGCCCGGTTCCGCTGGCAGGCAGCCTaGTGCAGTGCAGTCTCACCCGTTTCACTGTCTGCC +
Preference number: 6 (lower is better)
Translates to: SWHTARFRWQAA*CSAVSPVSLSA
Trigger: GGCAGACAGTGAAACGGGTGAGACTGCACTGCACAAGGCTGCCTGCCAGCGGAACCGGGCTGTGTGCCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000477835.5
ENST00000494390.5
ENST00000497321.5
ENST00000614521.2
CDS GCA 72 bp GTCCAAAGTCGCTCTGGGCTCCTTGGCTGGACCATTTaGCACAGGAAGGCTGAGGGGATGTGCAGGAGCCAG +
Preference number: 6 (lower is better)
Translates to: VQSRSGLLGWTI*HRKAEGMCRSQ
Trigger: CTGGCTCCTGCACATCCCCTCAGCCTTCCTGTGGCAAATGGTCCAGCCAAGGAGCCCAGAGCGACTTTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000470895.5
ENST00000483619.1
ENST00000614521.2
CDS GCA 72 bp TGGCACACAGCCCGGTTCCGCTGGCAGGCAGCCTTGTaGAGTGCAGTCTCACCCGTTTCACTGTCTGCCATA +
Preference number: 6 (lower is better)
Translates to: WHTARFRWQAAL*SAVSPVSLSAI
Trigger: TATGGCAGACAGTGAAACGGGTGAGACTGCACTGCACAAGGCTGCCTGCCAGCGGAACCGGGCTGTGTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000477835.5
ENST00000494390.5
ENST00000497321.5
ENST00000614521.2
CDS CCA 72 bp ACAGGAAGGCTGAGGGGATGTGCAGGAGCCAGATGCTaGAGGCCTGCCCGGGAGATTGCTTTCCTGTACGAG +
Preference number: 6 (lower is better)
Translates to: TGRLRGCAGARC*RPAREIAFLYE
Trigger: CTCGTACAGGAAAGCAATCTCCCGGGCAGGCCTCCAGCATCTGGCTCCTGCACATCCCCTCAGCCTTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000470895.5
ENST00000614521.2
CDS GCA 72 bp CACAGCCCGGTTCCGCTGGCAGGCAGCCTTGTGCAGTaGAGTCTCACCCGTTTCACTGTCTGCCATATCCAA +
Preference number: 6 (lower is better)
Translates to: HSPVPLAGSLVQ*SLTRFTVCHIQ
Trigger: TTGGATATGGCAGACAGTGAAACGGGTGAGACTGCACTGCACAAGGCTGCCTGCCAGCGGAACCGGGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000477835.5
ENST00000494390.5
ENST00000497321.5
ENST00000614521.2
CDS CCA 72 bp CTCACTCCAGTCCAAAGTCGCTCTGGGCTCCTTGGCTaGACCATTTGCCACAGGAAGGCTGAGGGGATGTGC +
Preference number: 6 (lower is better)
Translates to: LTPVQSRSGLLG*TICHRKAEGMC
Trigger: GCACATCCCCTCAGCCTTCCTGTGGCAAATGGTCCAGCCAAGGAGCCCAGAGCGACTTTGGACTGGAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000470895.5
ENST00000483619.1
ENST00000614521.2
CDS GCA 72 bp AGGGAGCTATCATCCCCAGCCCACTGTCACTCAGCATaGGTTTCCGCAGGGCAGGATTCCACCAGTCTGAGA +
Preference number: 6 (lower is better)
Translates to: RELSSPAHCHSA*VSAGQDSTSLR
Trigger: TCTCAGACTGGTGGAATCCTGCCCTGCGGAAACGCATGCTGAGTGACAGTGGGCTGGGGATGATAGCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000460662.2
ENST00000614521.2
CDS GCA 72 bp CTTACCCTTGGAGTCCGTCTTTCTCAGAGATGCTCCTaGATCCACCAGAAGCTGGCACACAGCCCGGTTCCG +
Preference number: 6 (lower is better)
Translates to: LTLGVRLSQRCS*IHQKLAHSPVP
Trigger: CGGAACCGGGCTGTGTGCCAGCTTCTGGTGGATGCAGGAGCATCTCTGAGAAAGACGGACTCCAAGGGTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000477835.5
ENST00000486153.1
ENST00000494390.5
ENST00000497321.5
ENST00000614521.2
CDS CAA 72 bp GCATTCTCACTCCAGTCCAAAGTCGCTCTGGGCTCCTaGGCTGGACCATTTGCCACAGGAAGGCTGAGGGGA +
Preference number: 6 (lower is better)
Translates to: AFSLQSKVALGS*AGPFATGRLRG
Trigger: TCCCCTCAGCCTTCCTGTGGCAAATGGTCCAGCCAAGGAGCCCAGAGCGACTTTGGACTGGAGTGAGAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000470895.5
ENST00000483619.1
ENST00000614521.2
CDS GCA 72 bp AGGTGTCTTACCCTTGGAGTCCGTCTTTCTCAGAGATaGTCCTGCATCCACCAGAAGCTGGCACACAGCCCG +
Preference number: 6 (lower is better)
Translates to: RCLTLGVRLSQR*SCIHQKLAHSP
Trigger: CGGGCTGTGTGCCAGCTTCTGGTGGATGCAGGAGCATCTCTGAGAAAGACGGACTCCAAGGGTAAGACACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000477835.5
ENST00000486153.1
ENST00000494390.5
ENST00000497321.5
ENST00000614521.2
CDS CCA 72 bp CATTCACGGCATTCTCACTCCAGTCCAAAGTCGCTCTaGGCTCCTTGGCTGGACCATTTGCCACAGGAAGGC +
Preference number: 6 (lower is better)
Translates to: HSRHSHSSPKSL*APWLDHLPQEG
Trigger: GCCTTCCTGTGGCAAATGGTCCAGCCAAGGAGCCCAGAGCGACTTTGGACTGGAGTGAGAATGCCGTGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000470895.5
ENST00000483619.1
ENST00000614521.2
CDS CCA 72 bp TCTCCTCTCCAAGGTAGCAGAGGTCTCCCGAGACGTTaGTCTCCAGCCACAGGTGTTCTCCATTCACGGCAT +
Preference number: 6 (lower is better)
Translates to: SPLQGSRGLPRR*SPATGVLHSRH
Trigger: ATGCCGTGAATGGAGAACACCTGTGGCTGGAGACCAACGTCTCGGGAGACCTCTGCTACCTTGGAGAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000470895.5
ENST00000614521.2
CDS CCA 72 bp GTTGGCCTGATTCCTCAGGGAGATCCGAATCATAGCTaGGGCCAACCTACAGGGCTCCCCATCCACTTGCAT +
Preference number: 6 (lower is better)
Translates to: VGLIPQGDPNHS*GQPTGLPIHLH
Trigger: ATGCAAGTGGATGGGGAGCCCTGTAGGTTGGCCCCAGCTATGATTCGGATCTCCCTGAGGAATCAGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000460662.2
ENST00000614521.2
CDS GCA 72 bp CACAGCCCGGTTCCGCTGGCAGGCAGCCTTGTGCAGTaGAGTCTCACCCCTAAATCAAAGATGAAATGGGAA +
Preference number: 6 (lower is better)
Translates to: HSPVPLAGSLVQ*SLTPKSKMKWE
Trigger: TTCCCATTTCATCTTTGATTTAGGGGTGAGACTGCACTGCACAAGGCTGCCTGCCAGCGGAACCGGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486153.1
CDS CAA 90 bp TTCCAGGGGAGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTaGCTCATGTCCTCTTTGCCCGAATACCAGGGTCAAACAGCAGTT +
Preference number: 6 (lower is better)
Translates to: FQGSCPIAGRADVIR*LMSSLPEYQGQTAV
Trigger: AACTGCTGTTTGACCCTGGTATTCGGGCAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCTCCCCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000477835.5
ENST00000486153.1
ENST00000494390.5
ENST00000614521.2
CDS TCA 72 bp CCCCCAGGGAGCAGGGTTCTTCAATGTGATGCAGCATaGAGCAGGTCACCTTATTGTGAAACGCCTGCTTGC +
Preference number: 6 (lower is better)
Translates to: PPGSRVLQCDAA*SRSPYCETPAC
Trigger: GCAAGCAGGCGTTTCACAATAAGGTGACCTGCTTCATGCTGCATCACATTGAAGAACCCTGCTCCCTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS CAA 72 bp GGGAGGGCAGATGTGATACGCTTGCTCATGTCCTCTTaGCCCGAATACCAGGGTCAAACAGCAGTTTCCAGG +
Preference number: 6 (lower is better)
Translates to: GRADVIRLLMSS*PEYQGQTAVSR
Trigger: CCTGGAAACTGCTGTTTGACCCTGGTATTCGGGCAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000477835.5
ENST00000486153.1
ENST00000494390.5
ENST00000497321.5
ENST00000614521.2
CDS CAA 72 bp AGCTGCCCAATTGCAGGGAGGGCAGATGTGATACGCTaGCTCATGTCCTCTTTGCCCGAATACCAGGGTCAA +
Preference number: 6 (lower is better)
Translates to: SCPIAGRADVIR*LMSSLPEYQGQ
Trigger: TTGACCCTGGTATTCGGGCAAAGAGGACATGAGCAAGCGTATCACATCTGCCCTCCCTGCAATTGGGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000477835.5
ENST00000486153.1
ENST00000494390.5
ENST00000614521.2
CDS TCA 72 bp GAAGCTTTGGCAGTGAAACCAGAAGGACTCAGCCTGTaGGGGAAGGTTGGTTTGTCTCCAACTCGAACTGGG +
Preference number: 6 (lower is better)
Translates to: EALAVKPEGLSL*GKVGLSPTRTG
Trigger: CCCAGTTCGAGTTGGAGACAAACCAACCTTCCCTCACAGGCTGAGTCCTTCTGGTTTCACTGCCAAAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475388.1
CDS GCA 72 bp GCGGTCCCACATTCTGAGTTGCTAGTAGTATTCGAGTaGTCAGGAAGCCTCCCTTACCAAGTGGCATCTCCT +
Preference number: 6 (lower is better)
Translates to: AVPHSELLVVFE*SGSLPYQVASP
Trigger: AGGAGATGCCACTTGGTAAGGGAGGCTTCCTGAGCACTCGAATACTACTAGCAACTCAGAATGTGGGACCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483619.1
CDS CAA 72 bp GGGGTGTTTTTCCTTCCAGCGGTCCCACATTCTGAGTaGCTAGTAGTATTCGAGTGCTCAGGAAGCCTCCCT +
Preference number: 6 (lower is better)
Translates to: GVFFLPAVPHSE*LVVFECSGSLP
Trigger: AGGGAGGCTTCCTGAGCACTCGAATACTACTAGCAACTCAGAATGTGGGACCGCTGGAAGGAAAAACACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483619.1
CDS TCA 72 bp CTGAAGAGACTGGTGACTGTAGCACGCGGGAGTGGCTaGGATCTTTCAGATCTGAGTCCTCATAATAGGGAG +
Preference number: 6 (lower is better)
Translates to: LKRLVTVARGSG*DLSDLSPHNRE
Trigger: CTCCCTATTATGAGGACTCAGATCTGAAAGATCTCAGCCACTCCCGCGTGCTACAGTCACCAGTCTCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000614521.2
CDS TCA 72 bp CCCTTACCAAGTGGCATCTCCTCCAAAGAGACCACCTaGTTTGTAGCGACACATGGCCCACCAGGTAAAGTA +
Preference number: 6 (lower is better)
Translates to: PLPSGISSKETT*FVATHGPPGKV
Trigger: TACTTTACCTGGTGGGCCATGTGTCGCTACAAATCAGGTGGTCTCTTTGGAGGAGATGCCACTTGGTAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483619.1
CDS TCA 72 bp TCCAGGGGTGTTTTTCCTTCCAGCGGTCCCACATTCTaGGTTGCTAGTAGTATTCGAGTGCTCAGGAAGCCT +
Preference number: 6 (lower is better)
Translates to: SRGVFPSSGPTF*VASSIRVLRKP
Trigger: AGGCTTCCTGAGCACTCGAATACTACTAGCAACTCAGAATGTGGGACCGCTGGAAGGAAAAACACCCCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483619.1
CDS CCA 72 bp GCAGTGGAAATCACTGGGTGTAGGAATCAGCAGCTGTaGGCTTCTGGAAATAACGTCCTGGCACTTACACGA +
Preference number: 6 (lower is better)
Translates to: AVEITGCRNQQL*ASGNNVLALTR
Trigger: TCGTGTAAGTGCCAGGACGTTATTTCCAGAAGCCCACAGCTGCTGATTCCTACACCCAGTGATTTCCACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475388.1
CDS CCA 72 bp GTGCAGTGCAGTCTCACCCCTAAATCAAAGATGAAATaGGAAACCACCCATAAAGGGGTTGGAGGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: VQCSLTPKSKMK*ETTHKGVGGSR
Trigger: CCTGCTGCCTCCAACCCCTTTATGGGTGGTTTCCCATTTCATCTTTGATTTAGGGGTGAGACTGCACTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486153.1
CDS CAA 72 bp TCAGCATTCCCCAGGTTCCACTTTCCTCCCTGCTTCTaGAGCCATGATGCTTGTCCTCTGTTACACTCCTAC +
Preference number: 6 (lower is better)
Translates to: SAFPRFHFPPCF*SHDACPLLHSY
Trigger: GTAGGAGTGTAACAGAGGACAAGCATCATGGCTCAAGAAGCAGGGAGGAAAGTGGAACCTGGGGAATGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494390.5
CDS TCA 72 bp CCACTTGCATGGGGATGGATTTGTAAGTTAGAAGCATaGCTTCTCGACACTGGTGTAGCCTCTCTCCATGGC +
Preference number: 6 (lower is better)
Translates to: PLAWGWICKLEA*LLDTGVASLHG
Trigger: GCCATGGAGAGAGGCTACACCAGTGTCGAGAAGTCATGCTTCTAACTTACAAATCCATCCCCATGCAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000460662.2
ENST00000614521.2
CDS CCA 72 bp CAGAGGGAGCTTACATACGCCATCTTCAAGTTCTTCTaGAGGCAAGTCGGGGTTTCTTTCCACATGGAGGTT +
Preference number: 6 (lower is better)
Translates to: QRELTYAIFKFF*RQVGVSFHMEV
Trigger: AACCTCCATGTGGAAAGAAACCCCGACTTGCCTCCAGAAGAACTTGAAGATGGCGTATGTAAGCTCCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS CCA 72 bp TCCTACGTAGTCCCGAATGAAAACCGATTTCCCAGTTaGGCATTCTCTCCAGGCACATTTCAACGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: SYVVPNENRFPS*AFSPGTFQRSA
Trigger: TGCAGACCGTTGAAATGTGCCTGGAGAGAATGCCCAACTGGGAAATCGGTTTTCATTCGGGACTACGTAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494390.5
CDS CCA 72 bp GACCTTTGTCACAGTTGGGTGGAATCCAGTCTTTCCTaGATAGAACAGCCTCCCATCATGTGCTCACACCTT +
Preference number: 6 (lower is better)
Translates to: DLCHSWVESSLS*IEQPPIMCSHL
Trigger: AAGGTGTGAGCACATGATGGGAGGCTGTTCTATCCAGGAAAGACTGGATTCCACCCAACTGTGACAAAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494390.5
CDS CAA 72 bp AGAAACAGGTTCATCAGTGTAGCCTGCAAATCTGACTaGGCAGTTCTCCTCTCCAAGGTAGCAGAGGTCTCC +
Preference number: 6 (lower is better)
Translates to: RNRFISVACKSD*AVLLSKVAEVS
Trigger: GGAGACCTCTGCTACCTTGGAGAGGAGAACTGCCAAGTCAGATTTGCAGGCTACACTGATGAACCTGTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470895.5
CDS TCA 72 bp AAAGATCAAAGACTTGCCGTGGATTCAGGTACCACATaGACATCTGCAGGACTTTGGTTCCCTGGTTGCCTC +
Preference number: 6 (lower is better)
Translates to: KDQRLAVDSGTT*TSAGLWFPGCL
Trigger: GAGGCAACCAGGGAACCAAAGTCCTGCAGATGTTCATGTGGTACCTGAATCCACGGCAAGTCTTTGATCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS CCA 72 bp AGTGAAACCAGAAGGACTCAGCCTGTGAGGGAAGGTTaGTTTGTCTCCAACTCGAACTGGGAAATACCTTCT +
Preference number: 6 (lower is better)
Translates to: SETRRTQPVREG*FVSNSNWEIPS
Trigger: AGAAGGTATTTCCCAGTTCGAGTTGGAGACAAACCAACCTTCCCTCACAGGCTGAGTCCTTCTGGTTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475388.1
CDS CAA 72 bp CGCATCTTTTGGCCCTTCCTGAGAAAGATCAAAGACTaGCCGTGGATTCAGGTACCACATGAACATCTGCAG +
Preference number: 6 (lower is better)
Translates to: RIFWPFLRKIKD*PWIQVPHEHLQ
Trigger: CTGCAGATGTTCATGTGGTACCTGAATCCACGGCAAGTCTTTGATCTTTCTCAGGAAGGGCCAAAAGATGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS CAA 90 bp CAATTCAAGCGCATCTTTTGGCCCTTCCTGAGAAAGATCAAAGACTaGCCGTGGATTCAGGTACCACATGAACATCTGCAGGACTTTGGT +
Preference number: 6 (lower is better)
Translates to: QFKRIFWPFLRKIKD*PWIQVPHEHLQDFG
Trigger: ACCAAAGTCCTGCAGATGTTCATGTGGTACCTGAATCCACGGCAAGTCTTTGATCTTTCTCAGGAAGGGCCAAAAGATGCGCTTGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS CCA 72 bp CGTTCCATCCCCACCACAGGCCAGAATTCGCAGATTTaGTACTTTCCTATACAATTCAAGCGCATCTTTTGG +
Preference number: 6 (lower is better)
Translates to: RSIPTTGQNSQI*YFPIQFKRIFW
Trigger: CCAAAAGATGCGCTTGAATTGTATAGGAAAGTACCAAATCTGCGAATTCTGGCCTGTGGTGGGGATGGAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS CAA 72 bp CCGTTCCATCCCCACCACAGGCCAGAATTCGCAGATTaGGTACTTTCCTATACAATTCAAGCGCATCTTTTG +
Preference number: 6 (lower is better)
Translates to: PFHPHHRPEFAD*VLSYTIQAHLL
Trigger: CAAAAGATGCGCTTGAATTGTATAGGAAAGTACCAAATCTGCGAATTCTGGCCTGTGGTGGGGATGGAACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS GCA 72 bp ACAACTAGAATACCCAGAGGTATCGCTCCAAATGACTaGACTAGTTCCCCAGCAATGGTTCTTAACCAGTCT +
Preference number: 6 (lower is better)
Translates to: TTRIPRGIAPND*TSSPAMVLNQS
Trigger: AGACTGGTTAAGAACCATTGCTGGGGAACTAGTGCAGTCATTTGGAGCGATACCTCTGGGTATTCTAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288490.9
ENST00000453654.6
CDS GCA 72 bp TTCAAACCTTCAGCTTTACAGTCGACAGAGACTATTTaGTCTAGGGGTGCAGATTCTGTACGAGACCTGCTT +
Preference number: 6 (lower is better)
Translates to: FKPSALQSTETI*SRGADSVRDLL
Trigger: AAGCAGGTCTCGTACAGAATCTGCACCCCTAGAGCAAATAGTCTCTGTCGACTGTAAAGCTGAAGGTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453654.6
CDS GCA 72 bp CAGTTGGGCATTCTCTCCAGGCACATTTCAACGGTCTaGATCACAACTGCAGAAACCTCATCTTTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: QLGILSRHISTV*ITTAETSSFSS
Trigger: AGAAGAAAAAGATGAGGTTTCTGCAGTTGTGATGCAGACCGTTGAAATGTGCCTGGAGAGAATGCCCAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494390.5
CDS CCA 72 bp AAATTAATCTTTTCTAGCTGCTCAATGCAGGCGGTGTaGACGACGATTTTACAGACTGCACACTTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: KLIFSSCSMQAV*TTILQTAHFLL
Trigger: CAGGAGGAAGTGTGCAGTCTGTAAAATCGTCGTCCACACCGCCTGCATTGAGCAGCTAGAAAAGATTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS CCA 72 bp TTTTGGCCCTTCCTGAGAAAGATCAAAGACTTGCCGTaGATTCAGGTACCACATGAACATCTGCAGGACTTT +
Preference number: 6 (lower is better)
Translates to: FWPFLRKIKDLP*IQVPHEHLQDF
Trigger: AAAGTCCTGCAGATGTTCATGTGGTACCTGAATCCACGGCAAGTCTTTGATCTTTCTCAGGAAGGGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000614521.2
CDS TCA 72 bp CCTTGTCATAGTGGAATCCTTCATAGTCTTGTAAACTaGTTTTGTTCACCCGGATCCTCAGACGATCTGGGA +
Preference number: 6 (lower is better)
Translates to: PCHSGILHSLVN*FCSPGSSDDLG
Trigger: TCCCAGATCGTCTGAGGATCCGGGTGAACAAAATCAGTTTACAAGACTATGAAGGATTCCACTATGACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000460662.2
ENST00000614521.2
CDS CAA 72 bp CACCACCATATCTGGGTCCAGAATAAAAATCTCATCTaGGGAAATCTCCATCACAAAGTGCAAATGTTCCTG +
Preference number: 6 (lower is better)
Translates to: HHHIWVQNKNLI*GNLHHKVQMFL
Trigger: CAGGAACATTTGCACTTTGTGATGGAGATTTCCCAAGATGAGATTTTTATTCTGGACCCAGATATGGTGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000460662.2
ENST00000614521.2
CDS GCA 72 bp TGTTCCAATTCAGAGTTAAGGCTGCTCTACACTGTGTaGATTCGTGTCCGTAAAGAAAGTAGCAAAATAAAA +
Preference number: 6 (lower is better)
Translates to: CSNSELRLLYTV*IRVRKESSKIK
Trigger: TTTTATTTTGCTACTTTCTTTACGGACACGAATGCACACAGTGTAGAGCAGCCTTAACTCTGAATTGGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475388.1
CDS CAA 72 bp GTGAGATCTGTTCCATCACAAACAACTTTAACATGTTaGGATAGATCTCTAGAACTTCTCTGTAGGAAGTCA +
Preference number: 6 (lower is better)
Translates to: VRSVPSQTTLTC*DRSLELLCRKS
Trigger: TGACTTCCTACAGAGAAGTTCTAGAGATCTATCCAAACATGTTAAAGTTGTTTGTGATGGAACAGATCTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288490.9
ENST00000424189.6
ENST00000446122.5
ENST00000453654.6
ENST00000460662.2
ENST00000614521.2