RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DGKH (Homo sapiens)

Ensembl gene IDs: ENSG00000102780

Ensembl transcript IDs: ENST00000261491.9, ENST00000337343.9, ENST00000379274.6, ENST00000498255.6, ENST00000536612.3, ENST00000611224.1, ENST00000626247.2, ENST00000627777.2, ENST00000628433.2

Found 1433 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTTCCACAATGAGAGGGCTGAGGCCAGGGAGAACAGGCGCAGCCTaGGAATCTGTGTGCAAAGCCTGCAGCAGTTGTTCGAGCTTCTCG +
Preference number: 1 (lower is better)
Translates to: SSTMRGLRPGRTGAA*ESVCKACSSCSSFS
Trigger: CGAGAAGCTCGAACAACTGCTGCAGGCTTTGCACACAGATTCCCAGGCTGCGCCTGTTCTCCCTGGCCTCAGCCCTCTCATTGTGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR GCA 90 bp AGAGGGCTGAGGCCAGGGAGAACAGGCGCAGCCTGGGAATCTGTGTaGAAAGCCTGCAGCAGTTGTTCGAGCTTCTCGTTTAGGACTGAA +
Preference number: 1 (lower is better)
Translates to: RGLRPGRTGAAWESV*KACSSCSSFSFRTE
Trigger: TTCAGTCCTAAACGAGAAGCTCGAACAACTGCTGCAGGCTTTGCACACAGATTCCCAGGCTGCGCCTGTTCTCCCTGGCCTCAGCCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR GCA 90 bp AGGCCAGGGAGAACAGGCGCAGCCTGGGAATCTGTGTGCAAAGCCTaGAGCAGTTGTTCGAGCTTCTCGTTTAGGACTGAACATTTACTG +
Preference number: 1 (lower is better)
Translates to: RPGRTGAAWESVCKA*SSCSSFSFRTEHLL
Trigger: CAGTAAATGTTCAGTCCTAAACGAGAAGCTCGAACAACTGCTGCAGGCTTTGCACACAGATTCCCAGGCTGCGCCTGTTCTCCCTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CCA 90 bp TCTGGTATTGAGCACAGGGAGGTTTTCTTTGCTGGCTGCCACAGCTaGACCAGGGACAGAATCAGTTTGGGAATGGCCATAACTTGCCCG +
Preference number: 1 (lower is better)
Translates to: SGIEHREVFFAGCHS*TRDRISLGMAITCP
Trigger: CGGGCAAGTTATGGCCATTCCCAAACTGATTCTGTCCCTGGTCCAGCTGTGGCAGCCAGCAAAGAAAACCTCCCTGTGCTCAATACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CCA 90 bp ATTGTGGCTGCGTCACATATCCTAGTAATGAGCTCCTCTGCAGCCTaGGAGCATAGCTGCATCTGCGACACCTCTTCTGTTGCCAAGTCA +
Preference number: 1 (lower is better)
Translates to: IVAASHILVMSSSAA*EHSCICDTSSVAKS
Trigger: TGACTTGGCAACAGAAGAGGTGTCGCAGATGCAGCTATGCTCCCAGGCTGCAGAGGAGCTCATTACTAGGATATGTGACGCAGCCACAAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR GCA 90 bp AGCCTATCAGGGAGAAGAGGTGACAATTCCAGCCATTACAGTCATTaGAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGCTCATGCATA +
Preference number: 1 (lower is better)
Translates to: SLSGRRGDNSSHYSH*SQVQVGTSHPSSCI
Trigger: TATGCATGAGCTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAATTGTCACCTCTTCTCCCTGATAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR GCA 90 bp GCAGTGAGAGGAGAGAAACCCATGGCAACCAAGTGCTGTGGGGACTaGTCTGGGAGGCTATTCTATTGGCTAACAATTACTAGTGGAGGA +
Preference number: 1 (lower is better)
Translates to: AVRGEKPMATKCCGD*SGRLFYWLTITSGG
Trigger: TCCTCCACTAGTAATTGTTAGCCAATAGAATAGCCTCCCAGAGCAGTCCCCACAGCACTTGGTTGCCATGGGTTTCTCTCCTCTCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CCA 90 bp GGGAGCATAGCTGCATCTGCGACACCTCTTCTGTTGCCAAGTCAATaGCGTGATGGATGTACAAATGGGTTCGGAGAACTGGTTTACCAG +
Preference number: 1 (lower is better)
Translates to: GSIAASATPLLLPSQ*RDGCTNGFGELVYQ
Trigger: CTGGTAAACCAGTTCTCCGAACCCATTTGTACATCCATCACGCCATTGACTTGGCAACAGAAGAGGTGTCGCAGATGCAGCTATGCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR TCA 90 bp GTGCTCCTTCCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCACATaGCCCACTTTCGGTATCCCCAGATCCTTAAGATCTCGCCTTTCC +
Preference number: 1 (lower is better)
Translates to: VLLPSSLIPWRIRFT*PTFGIPRSLRSRLS
Trigger: GGAAAGGCGAGATCTTAAGGATCTGGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGGAAGGAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
3UTR TCA 90 bp CTGTCCAACATTTTGGTACTGGCTCGTTCCAGTTTCTCTAGGATCTaGGGAAGTTGGGTGTCATCGTCATATGAACCTCCCCAGCCAAGA +
Preference number: 1 (lower is better)
Translates to: LSNILVLARSSFSRI*GSWVSSSYEPPQPR
Trigger: TCTTGGCTGGGGAGGTTCATATGACGATGACACCCAACTTCCTCAGATCCTAGAGAAACTGGAACGAGCCAGTACCAAAATGTTGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CCA 90 bp AGATCTGTAATGTTAGAGAGTTCTGGGAACCTGGCACCTCCTGTTTaGTTGCACAGGAAAGTGTTCACAGGAGCAGGACAGCACTTAGGT +
Preference number: 1 (lower is better)
Translates to: RSVMLESSGNLAPPV*LHRKVFTGAGQHLG
Trigger: ACCTAAGTGCTGTCCTGCTCCTGTGAACACTTTCCTGTGCAACCAAACAGGAGGTGCCAGGTTCCCAGAACTCTCTAACATTACAGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CCA 90 bp TCTCTGTCAGTTTCTGTAATTCCACCTCCACAGAGTGTAAGGCATTaGATACTCGCTCTTCATGTGGCGATTCCAGCTGCAAAGGAACCC +
Preference number: 1 (lower is better)
Translates to: SLSVSVIPPPQSVRH*ILALHVAIPAAKEP
Trigger: GGGTTCCTTTGCAGCTGGAATCGCCACATGAAGAGCGAGTATCCAATGCCTTACACTCTGTGGAGGTGGAATTACAGAAACTGACAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR TCA 90 bp CATAGCTGCATCTGCGACACCTCTTCTGTTGCCAAGTCAATGGCGTaGTGGATGTACAAATGGGTTCGGAGAACTGGTTTACCAGAATCA +
Preference number: 1 (lower is better)
Translates to: HSCICDTSSVAKSMA*WMYKWVRRTGLPES
Trigger: TGATTCTGGTAAACCAGTTCTCCGAACCCATTTGTACATCCATCACGCCATTGACTTGGCAACAGAAGAGGTGTCGCAGATGCAGCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CCA 90 bp AAACTATTTGCCCGCAACATGATTTCCCTTGGTTTGACGGCTTTCTaGGAGGAAGGTTTTGTAACGTCATCCCCAAGCTGCTCTTTGCTT +
Preference number: 1 (lower is better)
Translates to: KLFARNMISLGLTAF*EEGFVTSSPSCSLL
Trigger: AAGCAAAGAGCAGCTTGGGGATGACGTTACAAAACCTTCCTCCCAGAAAGCCGTCAAACCAAGGGAAATCATGTTGCGGGCAAATAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CCA 90 bp AGATTCATCTGTTTCTGTGCTGTCATAATCAGAGGACTGATTAGCTaGTTCACAGGGGTGAACTGTCGGGTCATCCATAACTTTTCCGGC +
Preference number: 1 (lower is better)
Translates to: RFICFCAVIIRGLIS*FTGVNCRVIHNFSG
Trigger: GCCGGAAAAGTTATGGATGACCCGACAGTTCACCCCTGTGAACCAGCTAATCAGTCCTCTGATTATGACAGCACAGAAACAGATGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR TCA 90 bp AGATCTCGCCTTTCCAGATGCAAAAGTTCAGCCCCTCTGATGTCATaGCGGATGAAGATATCTTTGTACTCTCCCAAATTGAGCAGATCC +
Preference number: 1 (lower is better)
Translates to: RSRLSRCKSSAPLMS*RMKISLYSPKLSRS
Trigger: GGATCTGCTCAATTTGGGAGAGTACAAAGATATCTTCATCCGTCATGACATCAGAGGGGCTGAACTTTTGCATCTGGAAAGGCGAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627777.2
3UTR CCA 90 bp CTGCCAATCTCCTGTGTCCCACACTGGCTACAAAAATACAACCACTaGGTAGGTAGGGCTCATCTAGAACCAGAATTAGGAATAAGGATT +
Preference number: 1 (lower is better)
Translates to: LPISCVPHWLQKYNH*VGRAHLEPELGIRI
Trigger: AATCCTTATTCCTAATTCTGGTTCTAGATGAGCCCTACCTACCCAGTGGTTGTATTTTTGTAGCCAGTGTGGGACACAGGAGATTGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR TCA 90 bp TCAGCAAGGGTGATGAATGAGTTTCAGCTCATTGCTGGAGTTAGCTaGAGAATGAATAGGACACAGTGGATGAAGGAACAAGCTATTCCG +
Preference number: 1 (lower is better)
Translates to: SARVMNEFQLIAGVS*RMNRTQWMKEQAIP
Trigger: CGGAATAGCTTGTTCCTTCATCCACTGTGTCCTATTCATTCTTCAGCTAACTCCAGCAATGAGCTGAAACTCATTCATCACCCTTGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR TCA 90 bp CATCCATCAGTGAACAGTTGGGTTGCTTCCACTTTTTGGCTCCTATaGATAACGCTGCTACGAACATGGTGTAGAACTGCTTCACAATTG +
Preference number: 1 (lower is better)
Translates to: HPSVNSWVASTFWLL*ITLLRTWCRTASQL
Trigger: CAATTGTGAAGCAGTTCTACACCATGTTCGTAGCAGCGTTATTCATAGGAGCCAAAAAGTGGAAGCAACCCAACTGTTCACTGATGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611224.1
3UTR CCA 90 bp ATGGCAACCAAGTGCTGTGGGGACTGCTCTGGGAGGCTATTCTATTaGCTAACAATTACTAGTGGAGGAATTTTCAATTCTCACTCTTCT +
Preference number: 1 (lower is better)
Translates to: MATKCCGDCSGRLFY*LTITSGGIFNSHSS
Trigger: AGAAGAGTGAGAATTGAAAATTCCTCCACTAGTAATTGTTAGCCAATAGAATAGCCTCCCAGAGCAGTCCCCACAGCACTTGGTTGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR GCA 90 bp GTTTATCTTCTGTTGGTTTGCCCAGAGTGCACACATGCTCATGAATaGACACTTACCTCATGTGGACTTTCATGTGGAATTCTAAGCCTT +
Preference number: 1 (lower is better)
Translates to: VYLLLVCPECTHAHE*TLTSCGLSCGILSL
Trigger: AAGGCTTAGAATTCCACATGAAAGTCCACATGAGGTAAGTGTGCATTCATGAGCATGTGTGCACTCTGGGCAAACCAACAGAAGATAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR GCA 90 bp ATTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTaGTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTT +
Preference number: 1 (lower is better)
Translates to: ISPTAKYQATEVLQW*LLIYAENYKNSHLL
Trigger: AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
3UTR TCA 90 bp GTTACTTCTTTAGGAAGGCCTCCTATTACAATGGCATCATATTACTaGCTTGACACAGAGGTTGCTATACAAAAGTCAATCAGGGGATGC +
Preference number: 1 (lower is better)
Translates to: VTSLGRPPITMASYY*LDTEVAIQKSIRGC
Trigger: GCATCCCCTGATTGACTTTTGTATAGCAACCTCTGTGTCAAGTCAGTAATATGATGCCATTGTAATAGGAGGCCTTCCTAAAGAAGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR TCA 90 bp CTTTGCATGAAAGAATACCATTCCACAGTCAGAGAACGCAGTCAGTaGTCCATGCTCTGGATTAAACATTCAGAACTCAGTACAGAGAAA +
Preference number: 1 (lower is better)
Translates to: LCMKEYHSTVRERSQ*SMLWIKHSELSTEK
Trigger: TTTCTCTGTACTGAGTTCTGAATGTTTAATCCAGAGCATGGATCACTGACTGCGTTCTCTGACTGTGGAATGGTATTCTTTCATGCAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR TCA 90 bp GCCGGATTTAGCAACTGTTTAAAGCGACGGAGGAACTTTACTCCCTaGTTATCTCCACTCTTAGAATTGACAAAAACCAATAGAGGACTA +
Preference number: 1 (lower is better)
Translates to: AGFSNCLKRRRNFTP*LSPLLELTKTNRGL
Trigger: TAGTCCTCTATTGGTTTTTGTCAATTCTAAGAGTGGAGATAATCAGGGAGTAAAGTTCCTCCGTCGCTTTAAACAGTTGCTAAATCCGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR GCA 90 bp CCAAGTCACCAAAACATAACTTGTAGAAAGGACACAATGAGCCAATaGCAAAGTCAGTTACAGAACTGGATAAACCTAAACCATGTTCCC +
Preference number: 1 (lower is better)
Translates to: PSHQNITCRKDTMSQ*QSQLQNWINLNHVP
Trigger: GGGAACATGGTTTAGGTTTATCCAGTTCTGTAACTGACTTTGGCATTGGCTCATTGTGTCCTTTCTACAAGTTATGTTTTGGTGACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CCA 90 bp GAAAGGCTTAGCAAGTTTAAGAAAATCTCCTTGGTCTGCAGGGTATaGTCTGATCCACATTTACTGGTGTTTTTCTATAGGAACCAGCTA +
Preference number: 1 (lower is better)
Translates to: ERLSKFKKISLVCRV*SDPHLLVFFYRNQL
Trigger: TAGCTGGTTCCTATAGAAAAACACCAGTAAATGTGGATCAGACCATACCCTGCAGACCAAGGAGATTTTCTTAAACTTGCTAAGCCTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CCA 90 bp GAATGTCAGGGTAAAGTGTCCAATCTTTTGAGCCTCCTCCTTTTGTaGACCTTGTACAAAGTCAAACAAAGAGTAAAGCTGTATCACACT +
Preference number: 1 (lower is better)
Translates to: ECQGKVSNLLSLLLL*TLYKVKQRVKLYHT
Trigger: AGTGTGATACAGCTTTACTCTTTGTTTGACTTTGTACAAGGTCCACAAAAGGAGGAGGCTCAAAAGATTGGACACTTTACCCTGACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR TCA 90 bp TTTCACCTCACAGTGACCTGTCAGAATTTCCCTCCAGTTCAAGGCTaGATAATGTCCCATTATTATATGTGTGTGCCACATTTTGTTTAT +
Preference number: 1 (lower is better)
Translates to: FHLTVTCQNFPPVQG*IMSHYYMCVPHFVY
Trigger: ATAAACAAAATGTGGCACACACATATAATAATGGGACATTATTCAGCCTTGAACTGGAGGGAAATTCTGACAGGTCACTGTGAGGTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611224.1
3UTR CCA 90 bp TGTAGAAAGGACACAATGAGCCAATGCCAAAGTCAGTTACAGAACTaGATAAACCTAAACCATGTTCCCATCTCTAGGTATTGTGAATTT +
Preference number: 1 (lower is better)
Translates to: CRKDTMSQCQSQLQN*INLNHVPISRYCEF
Trigger: AAATTCACAATACCTAGAGATGGGAACATGGTTTAGGTTTATCCAGTTCTGTAACTGACTTTGGCATTGGCTCATTGTGTCCTTTCTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR TCA 90 bp CACACTATACAGCTCACGTGTGCCTTGTGTTTCTATCATATAAGGTaGAAGAAATCTATGTTCAAACTATTTGTTCCCAAATCTTTGCCA +
Preference number: 1 (lower is better)
Translates to: HTIQLTCALCFYHIR*KKSMFKLFVPKSLP
Trigger: TGGCAAAGATTTGGGAACAAATAGTTTGAACATAGATTTCTTTCACCTTATATGATAGAAACACAAGGCACACGTGAGCTGTATAGTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR TCA 90 bp CTTACCTCATGTGGACTTTCATGTGGAATTCTAAGCCTTTGTTTGTaGAAGTACACAAATATAGAGAAGTTCGGGTTTTCTATTACCTTC +
Preference number: 1 (lower is better)
Translates to: LTSCGLSCGILSLCL*KYTNIEKFGFSITF
Trigger: GAAGGTAATAGAAAACCCGAACTTCTCTATATTTGTGTACTTTCACAAACAAAGGCTTAGAATTCCACATGAAAGTCCACATGAGGTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR GCA 90 bp CAGAAACAAACAATTATCCATAACGGTTACTATCCCAGAACCAAATaGAAACATATGTTAAAAATATCCACCCTGGAACCTAGAACTGCT +
Preference number: 1 (lower is better)
Translates to: QKQTIIHNGYYPRTK*KHMLKISTLEPRTA
Trigger: AGCAGTTCTAGGTTCCAGGGTGGATATTTTTAACATATGTTTGCATTTGGTTCTGGGATAGTAACCGTTATGGATAATTGTTTGTTTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR GCA 90 bp ATTTCTGATTTACAGCTAACAGATGATTATTTTTCACAAAACAACTaGTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCA +
Preference number: 1 (lower is better)
Translates to: ISDLQLTDDYFSQNN*SSLLFIFCWFAQSA
Trigger: TGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTTTGTGAAAAATAATCATCTGTTAGCTGTAAATCAGAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR TCA 90 bp AATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAATATATTTaGACATGTCAGGTTTGCACAAAAAGAAAATGGCTTTGTGGAATG +
Preference number: 1 (lower is better)
Translates to: NRLRFLLPYYHCEYI*TCQVCTKRKWLCGM
Trigger: CATTCCACAAAGCCATTTTCTTTTTGTGCAAACCTGACATGTTCAAATATATTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
3UTR TCA 90 bp ATTAACTTGGAAAAGCTTTCTGTGTTAGCCTTTATGAGTATTTGGTaGTATGGTAGAAAGGCTTTATCTAATCCCAAAGAAAAACAGGCC +
Preference number: 1 (lower is better)
Translates to: INLEKLSVLAFMSIW*YGRKALSNPKEKQA
Trigger: GGCCTGTTTTTCTTTGGGATTAGATAAAGCCTTTCTACCATATCACCAAATACTCATAAAGGCTAACACAGAAAGCTTTTCCAAGTTAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CCA 90 bp CATCAGGGATATCAATTTGAACTTCTAATTTCTAACCTCACTGTCTaGGAAGTCTATCTTTATATCCAAAATGACCGTGGGAAAGAAATT +
Preference number: 1 (lower is better)
Translates to: HQGYQFELLISNLTV*EVYLYIQNDRGKEI
Trigger: AATTTCTTTCCCACGGTCATTTTGGATATAAAGATAGACTTCCCAGACAGTGAGGTTAGAAATTAGAAGTTCAAATTGATATCCCTGATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CCA 90 bp ATAAACTTTAAATGTGAGTTCACATTCTACAGATCTATCAGTCACTaGGATCACATGTACGGCTGTGGAAATAGGATTGATGAAATATGT +
Preference number: 1 (lower is better)
Translates to: INFKCEFTFYRSISH*DHMYGCGNRIDEIC
Trigger: ACATATTTCATCAATCCTATTTCCACAGCCGTACATGTGATCCCAGTGACTGATAGATCTGTAGAATGTGAACTCACATTTAAAGTTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 90 bp GTTTTCTTTGCTGGCTGCCACAGCTGGACCAGGGACAGAATCAGTTaGGGAATGGCCATAACTTGCCCGGGCATCTGGAGACCGAGGTGC +
Preference number: 2 (lower is better)
Translates to: VFFAGCHSWTRDRIS*GMAITCPGIWRPRC
Trigger: GCACCTCGGTCTCCAGATGCCCGGGCAAGTTATGGCCATTCCCAAACTGATTCTGTCCCTGGTCCAGCTGTGGCAGCCAGCAAAGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR TCA 90 bp CCTGGGAGCATAGCTGCATCTGCGACACCTCTTCTGTTGCCAAGTCAATGGCGTCGAACTCCCAGCAATTaGGGCAGCCAGTCCTGCTCT +
Preference number: 2 (lower is better)
Translates to: PGSIAASATPLLLPSQWRRTPSN*GSQSCS
Trigger: AGAGCAGGACTGGCTGCCTCAATTGCTGGGAGTTCG...ACGCCATTGACTTGGCAACAGAAGAGGTGTCGCAGATGCAGCTATGCTCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR TCA 90 bp CCTGGGAGCATAGCTGCATCTGCGACACCTCTTCTGTTGCCAAGTCAATGGCGTGCTGGTTCACAGGGGTaGACTGTCGGGTCATCCATA +
Preference number: 2 (lower is better)
Translates to: PGSIAASATPLLLPSQWRAGSQG*TVGSSI
Trigger: TATGGATGACCCGACAGTTCACCCCTGTGAACCAGC...ACGCCATTGACTTGGCAACAGAAGAGGTGTCGCAGATGCAGCTATGCTCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR TCA 90 bp GGAACTTCTCACCCCAGCTCATGCATAGATCAAAGCATAGAGGCCCCATCCCACACTCCTGACCTCCGGTaGTCTACCCACCTAAACCTC +
Preference number: 2 (lower is better)
Translates to: GTSHPSSCIDQSIEAPSHTPDLR*STHLNL
Trigger: GAGGTTTAGGTGGGTAGATCACCGGAGGTCAGGAGT...GTGGGATGGGGCCTCTATGCTTTGATCTATGCATGAGCTGGGGTGAGAAGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 90 bp CCTCTGCAGCCTGGGAGCATAGCTGCATCTGCGACACCTCTTCTGTaGCCAAGTCAATGGCGTGATGGATGTACAAATGGGTTCGGAGAA +
Preference number: 2 (lower is better)
Translates to: PLQPGSIAASATPLL*PSQWRDGCTNGFGE
Trigger: TTCTCCGAACCCATTTGTACATCCATCACGCCATTGACTTGGCAACAGAAGAGGTGTCGCAGATGCAGCTATGCTCCCAGGCTGCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CCA 90 bp TTCCAGCCATTACAGTCATTGCAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGTTACACCTCCGACTGTaGAGTGCTCCTTCCAAGCTC +
Preference number: 2 (lower is better)
Translates to: FQPLQSLQSGAGGNFSPQLHLRL*SAPSKL
Trigger: GAGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAA...CTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261491.9
3UTR-3UTR CCA 90 bp CCACAGAGTGTAAGGCATTGGATACTCGCTCTTCATGTGGCGATTCCAGCTGCAAGAACAGGCGCAGCCTaGGAATCTGTGTGCAAAGCC +
Preference number: 2 (lower is better)
Translates to: PQSVRHWILALHVAIPAARTGAA*ESVCKA
Trigger: GGCTTTGCACACAGATTCCCAGGCTGCGCCTGTTCT...TGCAGCTGGAATCGCCACATGAAGAGCGAGTATCCAATGCCTTACACTCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR GCA 90 bp TCTCTTGTAAGACTCTCCGGGCACCTTGGGTTGGCTTTATTCAGGGCATGGGAGTCTGTGTGCAAAGCCTaGAGCAGTTGTTCGAGCTTC +
Preference number: 2 (lower is better)
Translates to: SLVRLSGHLGLALFRAWESVCKA*SSCSSF
Trigger: GAAGCTCGAACAACTGCTGCAGGCTTTGCACACAGA...CTCCCATGCCCTGAATAAAGCCAACCCAAGGTGCCCGGAGAGTCTTACAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CCA 90 bp TCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTTACACCTCCGACTGTaGAGTGCTCCTTCCAAGCTC +
Preference number: 2 (lower is better)
Translates to: SPKLSRSSQAATSSVPHFLHLRL*SAPSKL
Trigger: GAGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAA...GAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
3UTR CAA 90 bp TCTGTAATGTTAGAGAGTTCTGGGAACCTGGCACCTCCTGTTTGGTaGCACAGGAAAGTGTTCACAGGAGCAGGACAGCACTTAGGTGGG +
Preference number: 2 (lower is better)
Translates to: SVMLESSGNLAPPVW*HRKVFTGAGQHLGG
Trigger: CCCACCTAAGTGCTGTCCTGCTCCTGTGAACACTTTCCTGTGCAACCAAACAGGAGGTGCCAGGTTCCCAGAACTCTCTAACATTACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 90 bp GCTTTCTGGGAGGAAGGTTTTGTAACGTCATCCCCAAGCTGCTCTTaGCTTTCACCCAGGGACTCTTCACTGGACGATTCCACAGCATCT +
Preference number: 2 (lower is better)
Translates to: AFWEEGFVTSSPSCS*LSPRDSSLDDSTAS
Trigger: AGATGCTGTGGAATCGTCCAGTGAAGAGTCCCTGGGTGAAAGCAAAGAGCAGCTTGGGGATGACGTTACAAAACCTTCCTCCCAGAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR TCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCGGAAACAGGTGTCAGTaGAGTCATTTGGGCCCTGCA +
Preference number: 2 (lower is better)
Translates to: NGTERKYILADGLPFPALGNRCQ*SHLGPA
Trigger: TGCAGGGCCCAAATGACTTCACTGACACCTGTTTCC...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR TCA 90 bp CCACAGAGTGTAAGGCATTGGATACTCGCTCTTCATGTGGCGATTCCAGCTGCATTCCGGCTTCCTCAATaGCTTGCCTCACTGCTTTCT +
Preference number: 2 (lower is better)
Translates to: PQSVRHWILALHVAIPAAFRLPQ*LASLLS
Trigger: AGAAAGCAGTGAGGCAAGTCATTGAGGAAGCCGGAA...TGCAGCTGGAATCGCCACATGAAGAGCGAGTATCCAATGCCTTACACTCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR GCA 90 bp GGAACTTCTCACCCCAGCTCATGCATAGATCAAAGCATAGAGGCCCCATCCCACAAGTCATTTGGGCCCTaGACAGCCATGCATAGACAA +
Preference number: 2 (lower is better)
Translates to: GTSHPSSCIDQSIEAPSHKSFGP*TAMHRQ
Trigger: TTGTCTATGCATGGCTGTGCAGGGCCCAAATGACTT...GTGGGATGGGGCCTCTATGCTTTGATCTATGCATGAGCTGGGGTGAGAAGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR GCA 90 bp ATCAGTTTGGGAATGGCCATAACTTGCCCGGGCATCTGGAGACCGAGGTGCAGTAACCATCGGAATCGGTaGTGTTTAGTGCAATTGGAG +
Preference number: 2 (lower is better)
Translates to: ISLGMAITCPGIWRPRCSNHRNR*CLVQLE
Trigger: CTCCAATTGCACTAAACAGCACCGATTCCGATGGTT...ACTGCACCTCGGTCTCCAGATGCCCGGGCAAGTTATGGCCATTCCCAAACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CCA 90 bp GTGGCGATTCCAGCTGCAAAGGAACCCTGCCAACTAGCAAAGATTCTGTTTCATACTTGCCCGGGCATCTaGAGACCGAGGTGCAGTTTT +
Preference number: 2 (lower is better)
Translates to: VAIPAAKEPCQLAKILFHTCPGI*RPRCSF
Trigger: AAAACTGCACCTCGGTCTCCAGATGCCCGGGCAAGT...ATGAAACAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGCTGGAATCGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CCA 90 bp GTGGCGATTCCAGCTGCAAAGGAACCCTGCCAACTAGCAAAGATTCTGTTTCATGGAGGTTTTCTTTGCTaGCTGCCACAGCTGGACCAG +
Preference number: 2 (lower is better)
Translates to: VAIPAAKEPCQLAKILFHGGFLC*LPQLDQ
Trigger: CTGGTCCAGCTGTGGCAGCCAGCAAAGAAAACCTCC...ATGAAACAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGCTGGAATCGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CAA 90 bp GAGATCTGTAATGTTAGAGAGTTCTGGGAACCTGGCACCTCCTGTTaGGTTGCACAGGAAAGTGTTCACAGGAGCAGGACAGCACTTAGG +
Preference number: 2 (lower is better)
Translates to: EICNVREFWEPGTSC*VAQESVHRSRTALR
Trigger: CCTAAGTGCTGTCCTGCTCCTGTGAACACTTTCCTGTGCAACCAAACAGGAGGTGCCAGGTTCCCAGAACTCTCTAACATTACAGATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 90 bp AAACCTGGGCAGATTATTCTGGTATTGAGCACAGGGAGGTTTTCTTaGCTGGCTGCCACAGCTGGACCAGGGACAGAATCAGTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: KPGQIILVLSTGRFS*LAATAGPGTESVWE
Trigger: TTCCCAAACTGATTCTGTCCCTGGTCCAGCTGTGGCAGCCAGCAAAGAAAACCTCCCTGTGCTCAATACCAGAATAATCTGCCCAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CCA 90 bp AGAACAGGCGCAGCCTGGGAATCTGTGTGCAAAGCCTGCAGCAGTTGTTCGAGCACGTCTTTTCTACTTTaGCAACGAAGTCCTTTACAG +
Preference number: 2 (lower is better)
Translates to: RTGAAWESVCKACSSCSSTSFLL*QRSPLQ
Trigger: CTGTAAAGGACTTCGTTGCCAAAGTAGAAAAGACGT...GCTCGAACAACTGCTGCAGGCTTTGCACACAGATTCCCAGGCTGCGCCTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CCA 90 bp CCACAGAGTGTAAGGCATTGGATACTCGCTCTTCATGTGGCGATTCCAGCTGCAAGAGGACTGATTAGCTaGTTCACAGGGGTGAACTGT +
Preference number: 2 (lower is better)
Translates to: PQSVRHWILALHVAIPAARGLIS*FTGVNC
Trigger: ACAGTTCACCCCTGTGAACCAGCTAATCAGTCCTCT...TGCAGCTGGAATCGCCACATGAAGAGCGAGTATCCAATGCCTTACACTCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR TCA 90 bp ATCAGTTTGGGAATGGCCATAACTTGCCCGGGCATCTGGAGACCGAGGTGCAGTATTAAATCAAACACCTaGGCCGGATTTAGCAACTGT +
Preference number: 2 (lower is better)
Translates to: ISLGMAITCPGIWRPRCSIKSNT*AGFSNC
Trigger: ACAGTTGCTAAATCCGGCTCAGGTGTTTGATTTAAT...ACTGCACCTCGGTCTCCAGATGCCCGGGCAAGTTATGGCCATTCCCAAACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR TCA 90 bp AGCTGCAAAGGAACCCTGCCAACTAGCAAAGATTCTGTTTCATTATACAGCGCCGGTGTCATCGTCATATaGACCTCCCCAGCCAAGAAC +
Preference number: 2 (lower is better)
Translates to: SCKGTLPTSKDSVSLYSAGVIVI*TSPAKN
Trigger: GTTCTTGGCTGGGGAGGTTCATATGACGATGACACC...GGCGCTGTATAATGAAACAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CAA 90 bp ATCTCTGTCAGTTTCTGTAATTCCACCTCCACAGAGTGTAAGGCATaGGATACTCGCTCTTCATGTGGCGATTCCAGCTGCAAAGGAACC +
Preference number: 2 (lower is better)
Translates to: ISVSFCNSTSTECKA*DTRSSCGDSSCKGT
Trigger: GGTTCCTTTGCAGCTGGAATCGCCACATGAAGAGCGAGTATCCAATGCCTTACACTCTGTGGAGGTGGAATTACAGAAACTGACAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR TCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCTGTACTCTCCCAAATTaGGCAGATCCAGCCAAGCAG +
Preference number: 2 (lower is better)
Translates to: LPRNSTNMITPPTVECSFCTLPN*ADPAKQ
Trigger: CTGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACA...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627777.2
3UTR-3UTR TCA 90 bp CCACAGAGTGTAAGGCATTGGATACTCGCTCTTCATGTGGCGATTCCAGCTGCAGAGCTTATCGATTTCTaGCAAAACCCAACCTACACT +
Preference number: 2 (lower is better)
Translates to: PQSVRHWILALHVAIPAAELIDF*QNPTYT
Trigger: AGTGTAGGTTGGGTTTTGTCAGAAATCGATAAGCTC...TGCAGCTGGAATCGCCACATGAAGAGCGAGTATCCAATGCCTTACACTCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR TCA 90 bp GTGGCGATTCCAGCTGCAAAGGAACCCTGCCAACTAGCAAAGATTCTGTTTCATGCCAAGTCAATGGCGTaGTGGATGTACAAATGGGTT +
Preference number: 2 (lower is better)
Translates to: VAIPAAKEPCQLAKILFHAKSMA*WMYKWV
Trigger: AACCCATTTGTACATCCATCACGCCATTGACTTGGC...ATGAAACAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGCTGGAATCGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR GCA 90 bp TCTCTTGTAAGACTCTCCGGGCACCTTGGGTTGGCTTTATTCAGGGCATGGGAGACAGAACGAAAATGTTaGTCTACAGAAACCATCGGA +
Preference number: 2 (lower is better)
Translates to: SLVRLSGHLGLALFRAWETERKC*STETIG
Trigger: TCCGATGGTTTCTGTAGAGCAACATTTTCGTTCTGT...CTCCCATGCCCTGAATAAAGCCAACCCAAGGTGCCCGGAGAGTCTTACAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR GCA 90 bp CCTGGGAGCATAGCTGCATCTGCGACACCTCTTCTGTTGCCAAGTCAATGGCGTAGAAGATATGACCACTaGATGTTCATCAGAATTGAG +
Preference number: 2 (lower is better)
Translates to: PGSIAASATPLLLPSQWRRRYDH*MFIRIE
Trigger: CTCAATTCTGATGAACATGCAGTGGTCATATCTTCT...ACGCCATTGACTTGGCAACAGAAGAGGTGTCGCAGATGCAGCTATGCTCCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR GCA 90 bp AATGGCGTGATGGATGTACAAATGGGTTCGGAGAACTGGTTTACCAGAATCACAGCCTGGGAATCTGTGTaGAAAGCCTGCAGCAGTTGT +
Preference number: 2 (lower is better)
Translates to: NGVMDVQMGSENWFTRITAWESV*KACSSC
Trigger: ACAACTGCTGCAGGCTTTGCACACAGATTCCCAGGC...TGTGATTCTGGTAAACCAGTTCTCCGAACCCATTTGTACATCCATCACGCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR GCA 90 bp TCTCTTGTAAGACTCTCCGGGCACCTTGGGTTGGCTTTATTCAGGGCATGGGAGGCTTCCTCAATGACTTaGCTCACTGCTTTCTTTAAA +
Preference number: 2 (lower is better)
Translates to: SLVRLSGHLGLALFRAWEASSMT*LTAFFK
Trigger: TTTAAAGAAAGCAGTGAGGCAAGTCATTGAGGAAGC...CTCCCATGCCCTGAATAAAGCCAACCCAAGGTGCCCGGAGAGTCTTACAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CCA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTACACCTCCGACTGTaGAGTGCTCCTTCCAAGCTC +
Preference number: 2 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHLHLRL*SAPSKL
Trigger: GAGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAA...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000379274.6
3UTR-3UTR CCA 90 bp GTGGCGATTCCAGCTGCAAAGGAACCCTGCCAACTAGCAAAGATTCTGTTTCATCTATGCCTTGCAAGCTaGGAAGAGGAATATACTGCC +
Preference number: 2 (lower is better)
Translates to: VAIPAAKEPCQLAKILFHLCLAS*EEEYTA
Trigger: GGCAGTATATTCCTCTTCCCAGCTTGCAAGGCATAG...ATGAAACAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGCTGGAATCGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CAA 90 bp AACGGCGTGGCACCAAAAGGATCAATGTTTGCCAGTAACATTTTGTaGATAATCGAACTCCCAGCAATTGAGGCAGCCAGTCCTGCTCTT +
Preference number: 2 (lower is better)
Translates to: NGVAPKGSMFASNIL*IIELPAIEAASPAL
Trigger: AAGAGCAGGACTGGCTGCCTCAATTGCTGGGAGTTCGATTATCAACAAAATGTTACTGGCAAACATTGATCCTTTTGGTGCCACGCCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR TCA 90 bp GGAACTTCTCACCCCAGCTCATGCATAGATCAAAGCATAGAGGCCCCATCCCACAAAAATTGTCACCACTaGGTCAGTACCCTGTTTATT +
Preference number: 2 (lower is better)
Translates to: GTSHPSSCIDQSIEAPSHKNCHH*VSTLFI
Trigger: AATAAACAGGGTACTGACTCAGTGGTGACAATTTTT...GTGGGATGGGGCCTCTATGCTTTGATCTATGCATGAGCTGGGGTGAGAAGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR TCA 90 bp CCACAGAGTGTAAGGCATTGGATACTCGCTCTTCATGTGGCGATTCCAGCTGCAAGGAACTTTACTCCCTaGTTATCTCCACTCTTAGAA +
Preference number: 2 (lower is better)
Translates to: PQSVRHWILALHVAIPAARNFTP*LSPLLE
Trigger: TTCTAAGAGTGGAGATAATCAGGGAGTAAAGTTCCT...TGCAGCTGGAATCGCCACATGAAGAGCGAGTATCCAATGCCTTACACTCTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR TCA 90 bp TCCACTTGCACTGGGACTCCTTCGTCACCAAATATAGTGATTTTCACTGTACGGGGCAACACTCCCAGCTaGCACTGTTTATTCAAGTTG +
Preference number: 2 (lower is better)
Translates to: STCTGTPSSPNIVIFTVRGNTPS*HCLFKL
Trigger: CAACTTGAATAAACAGTGTCAGCTGGGAGTGTTGCC...CCGTACAGTGAAAATCACTATATTTGGTGACGAAGGAGTCCCAGTGCAAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR GCA 90 bp CAACACGGCTATGCCTTGCAAGCTGGGAAGAGGAATATACTGCCCATCACACTCATAAAATTCTTCAGATaGTTCTGGAGGTCCTGGAAG +
Preference number: 2 (lower is better)
Translates to: QHGYALQAGKRNILPITLIKFFR*FWRSWK
Trigger: CTTCCAGGACCTCCAGAAGCATCTGAAGAATTTTAT...GAGTGTGATGGGCAGTATATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR GCA 90 bp AACTTTGGCACTATTCGAAATACGGTGCTTCTGTTGTTCCTTTTGGTGCAATCCGAGCATAGCTGCATCTaGGACACCTCTTCTGTTGCC +
Preference number: 2 (lower is better)
Translates to: NFGTIRNTVLLLFLLVQSEHSCI*DTSSVA
Trigger: GGCAACAGAAGAGGTGTCGCAGATGCAGCTATGCTC...GGATTGCACCAAAAGGAACAACAGAAGCACCGTATTTCGAATAGTGCCAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CCA 90 bp CTGTCAGTTTCTGTAATTCCACCTCCACAGAGTGTAAGGCATTGGATACTCGCTGGTTTGACGGCTTTCTaGGAGGAAGGTTTTGTAACG +
Preference number: 2 (lower is better)
Translates to: LSVSVIPPPQSVRHWILAGLTAF*EEGFVT
Trigger: CGTTACAAAACCTTCCTCCCAGAAAGCCGTCAAACC...AGCGAGTATCCAATGCCTTACACTCTGTGGAGGTGGAATTACAGAAACTGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CAA 90 bp ACTGCTTTCTTTAAACTATTTGCCCGCAACATGATTTCCCTTGGTTaGACGGCTTTCTGGGAGGAAGGTTTTGTAACGTCATCCCCAAGC +
Preference number: 2 (lower is better)
Translates to: TAFFKLFARNMISLG*TAFWEEGFVTSSPS
Trigger: GCTTGGGGATGACGTTACAAAACCTTCCTCCCAGAAAGCCGTCAAACCAAGGGAAATCATGTTGCGGGCAAATAGTTTAAAGAAAGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CAA 90 bp ATAAACGGCGTGGCACCAAAAGGATCAATGTTTGCCAGTAACATTTaGTTGATAATCGAACTCCCAGCAATTGAGGCAGCCAGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: INGVAPKGSMFASNI*LIIELPAIEAASPA
Trigger: AGCAGGACTGGCTGCCTCAATTGCTGGGAGTTCGATTATCAACAAAATGTTACTGGCAAACATTGATCCTTTTGGTGCCACGCCGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CAA 90 bp CTGCCAACTAGCAAAGATTCTGTTTCATTATACAGCGCCTTCACATaGATGGCTATTTCAGTGGCAGTGTCTCTTGTAAGACTCTCCGGG +
Preference number: 2 (lower is better)
Translates to: LPTSKDSVSLYSAFT*MAISVAVSLVRLSG
Trigger: CCCGGAGAGTCTTACAAGAGACACTGCCACTGAAATAGCCATCAATGTGAAGGCGCTGTATAATGAAACAGAATCTTTGCTAGTTGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR TCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTGAAATAGCACCAATATaGTTACACCTCCGACTGTGG +
Preference number: 2 (lower is better)
Translates to: RNSTNMITPPTVECSFQAEIAPI*LHLRLW
Trigger: CCACAGTCGGAGGTGTAATCATATTGGTGCTATTTC...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
3UTR-3UTR TCA 90 bp TCCACTTGCACTGGGACTCCTTCGTCACCAAATATAGTGATTTTCACTGTACGGGAAATAGCACCAATATaGTTACACCTCCGACTGTGG +
Preference number: 2 (lower is better)
Translates to: STCTGTPSSPNIVIFTVREIAPI*LHLRLW
Trigger: CCACAGTCGGAGGTGTAATCATATTGGTGCTATTTC...CCGTACAGTGAAAATCACTATATTTGGTGACGAAGGAGTCCCAGTGCAAGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR TCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCACTAGGAGTTGGAGGTaGTACCAATCTACATTCAAA +
Preference number: 2 (lower is better)
Translates to: NGTERKYILADGLPFPALTRSWR*YQSTFK
Trigger: TTTGAATGTAGATTGGTATCACCTCCAACTCCTAGT...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR TCA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACATGTGTAGCTAGACACTaGGAATACAAAGGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTCVARH*EYKGGE
Trigger: CTCTCCCCCTTTGTATTCTCAGTGTCTAGCTACACA...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR TCA 90 bp AACTTTGGCACTATTCGAAATACGGTGCTTCTGTTGTTCCTTTTGGTGCAATCCAGAATTCGCTTCACATaGCCCACTTTCGGTATCCCC +
Preference number: 2 (lower is better)
Translates to: NFGTIRNTVLLLFLLVQSRIRFT*PTFGIP
Trigger: GGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCT...GGATTGCACCAAAAGGAACAACAGAAGCACCGTATTTCGAATAGTGCCAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR TCA 90 bp AGCTGCAAAGGAACCCTGCCAACTAGCAAAGATTCTGTTTCATTATACAGCGCCTCTTGGCAGAAGATATaGCCACTGCATGTTCATCAG +
Preference number: 2 (lower is better)
Translates to: SCKGTLPTSKDSVSLYSASWQKI*PLHVHQ
Trigger: CTGATGAACATGCAGTGGTCATATCTTCTGCCAAGA...GGCGCTGTATAATGAAACAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR GCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTAGCCATTACAGTCATTaGAGTCAGGTGCAGGTGGGA +
Preference number: 2 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSSHYSH*SQVQVG
Trigger: TCCCACCTGCACCTGACTGCAATGACTGTAATGGCT...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR GCA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACAAAGTCAATCAGGGGATaGCATAGAAGAGACAAGCCC +
Preference number: 2 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTKSIRG*HRRDKP
Trigger: GGGCTTGTCTCTTCTATGGCATCCCCTGATTGACTT...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR GCA 90 bp CCACAGAGTGTAAGGCATTGGATACTCGCTCTTCATGTGGCGATTCCAGCTGCAATTCATCTGTTTCTGTaGTGTCATAATCAGAGGACT +
Preference number: 2 (lower is better)
Translates to: PQSVRHWILALHVAIPAAIHLFL*CHNQRT
Trigger: AGTCCTCTGATTATGACAGCACAGAAACAGATGAAT...TGCAGCTGGAATCGCCACATGAAGAGCGAGTATCCAATGCCTTACACTCTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CCA 90 bp CTTTGTTCTAAATTCTTGTACGATCTCTGTAATAACTCCCGGGTTCCAAGGACTTTACACCTCCGACTGTaGAGTGCTCCTTCCAAGCTC +
Preference number: 2 (lower is better)
Translates to: LCSKFLYDLCNNSRVPRTLHLRL*SAPSKL
Trigger: GAGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAA...AGTCCTTGGAACCCGGGAGTTATTACAGAGATCGTACAAGAATTTAGAACAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTCTGGCACCTCCTGTTTaGTTGCACAGGAAAGTGTTC +
Preference number: 2 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSLAPPV*LHRKVF
Trigger: GAACACTTTCCTGTGCAACCAAACAGGAGGTGCCAG...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR CCA 90 bp AGCTGCAAAGGAACCCTGCCAACTAGCAAAGATTCTGTTTCATTATACAGCGCCACCTGTCCAACATTTTaGTACTGGCTCGTTCCAGTT +
Preference number: 2 (lower is better)
Translates to: SCKGTLPTSKDSVSLYSATCPTF*YWLVPV
Trigger: AACTGGAACGAGCCAGTACCAAAATGTTGGACAGGT...GGCGCTGTATAATGAAACAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CCA 90 bp ATCTGTTTCTGTGCTGTCATAATCAGAGGACTGATTAGCTGGTTCACAGGGGTGCAACATGATTTCCCTTaGTTTGACGGCTTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: ICFCAVIIRGLISWFTGVQHDFP*FDGFLG
Trigger: TCCCAGAAAGCCGTCAAACCAAGGGAAATCATGTTG...CACCCCTGTGAACCAGCTAATCAGTCCTCTGATTATGACAGCACAGAAACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR TCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTATAGGACACAGTGGATaGAGGAACAAGCTATTCCGG +
Preference number: 2 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSIGHSG*RNKLFR
Trigger: CCGGAATAGCTTGTTCCTTCATCCACTGTGTCCTAT...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR TCA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACAGCAAAAGCACAGGAGTaGAAAATGGTGAGGGTTTGT +
Preference number: 2 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTAKAQE*KMVRVC
Trigger: ACAAACCCTCACCATTTTTCACTCCTGTGCTTTTGC...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR TCA 90 bp GTGGCGATTCCAGCTGCAAAGGAACCCTGCCAACTAGCAAAGATTCTGTTTCATCCATCACACTCAAGTTaGACCCTTTGTTCTAAATTC +
Preference number: 2 (lower is better)
Translates to: VAIPAAKEPCQLAKILFHPSHSS*TLCSKF
Trigger: GAATTTAGAACAAAGGGTTCAACTTGAGTGTGATGG...ATGAAACAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGCTGGAATCGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR GCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTGTGGGCCTGAAATTCTaGATTTCTGTAAGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSVGLKF*ISVSSQ
Trigger: CTGGGAGCTTACAGAAATGCAGAATTTCAGGCCCAC...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR GCA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACATTCAGCAGCAGGATGTaGTCCCTGAATTCACTAGTT +
Preference number: 2 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTFSSRM*SLNSLV
Trigger: AACTAGTGAATTCAGGGAGCACATCCTGCTGCTGAA...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 90 bp CATTTACTGGCCACGGCATCAGCTACAACGGCATTTTCCAAGGTTTaGTCATACGTCTTTTCTACTTTGGCAACGAAGTCCTTTACAGTT +
Preference number: 2 (lower is better)
Translates to: HLLATASATTAFSKV*SYVFSTLATKSFTV
Trigger: AACTGTAAAGGACTTCGTTGCCAAAGTAGAAAAGACGTATGACAAAACCTTGGAAAATGCCGTTGTAGCTGATGCCGTGGCCAGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR TCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTGAAATAGCACCAATATaGTTACACCTCCGACTGTGG +
Preference number: 2 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSEIAPI*LHLRLW
Trigger: CCACAGTCGGAGGTGTAATCATATTGGTGCTATTTC...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261491.9
3UTR-3UTR TCA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACAGACTATCAGAGGGACTaGAAAAGGAGACCTCTGACT +
Preference number: 2 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTDYQRD*KRRPLT
Trigger: AGTCAGAGGTCTCCTTTTTCAGTCCCTCTGATAGTC...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR TCA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACACCCGTGATTAAGTTGTaGACAAATGAACATGCCACA +
Preference number: 2 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTPVIKL*TNEHAT
Trigger: TGTGGCATGTTCATTTGTTCACAACTTAATCACGGG...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR TCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTATGTGTCCTCATGCATaGGCTATGTCAACAAGGACA +
Preference number: 2 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSMCPHA*AMSTRT
Trigger: TGTCCTTGTTGACATAGCTCATGCATGAGGACACAT...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR TCA 90 bp TCCACTTGCACTGGGACTCCTTCGTCACCAAATATAGTGATTTTCACTGTACGGAAGATGCGTTGCAACTaGGTCTTCATAAATCGTCAT +
Preference number: 2 (lower is better)
Translates to: STCTGTPSSPNIVIFTVRKMRCN*VFINRH
Trigger: ATGACGATTTATGAAGACTCAGTTGCAACGCATCTT...CCGTACAGTGAAAATCACTATATTTGGTGACGAAGGAGTCCCAGTGCAAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR GCA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACACCACTGTTTAGACAATaGAATCGTCTCAGATTCCTC +
Preference number: 2 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTPLFRQ*NRLRFL
Trigger: GAGGAATCTGAGACGATTGCATTGTCTAAACAGTGG...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR CCA 90 bp GTGGCGATTCCAGCTGCAAAGGAACCCTGCCAACTAGCAAAGATTCTGTTTCATCTTGTCATCAAAGGATaGTGCAGCAAATATATCATC +
Preference number: 2 (lower is better)
Translates to: VAIPAAKEPCQLAKILFHLVIKG*CSKYII
Trigger: GATGATATATTTGCTGCACCATCCTTTGATGACAAG...ATGAAACAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGCTGGAATCGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CCA 90 bp TCATTATACAGCGCCTTCACATTGATGGCTATTTCAGTGGCAGTGTCTCTTGTAAATTTTGATAATCCCTaGAGGCTGAACCCACGCTTC +
Preference number: 2 (lower is better)
Translates to: SLYSAFTLMAISVAVSLVNFDNP*RLNPRF
Trigger: GAAGCGTGGGTTCAGCCTCCAGGGATTATCAAAATT...TACAAGAGACACTGCCACTGAAATAGCCATCAATGTGAAGGCGCTGTATAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CAA 90 bp CTGAGCAACAGCGCTCAGCCATGGTTCAAGATTCCTAATGTTCATTaGAATGTCATATTGGCAGTACAATCACTGAGATCTCTCTTCAAC +
Preference number: 2 (lower is better)
Translates to: LSNSAQPWFKIPNVH*NVILAVQSLRSLFN
Trigger: GTTGAAGAGAGATCTCAGTGATTGTACTGCCAATATGACATTCAAATGAACATTAGGAATCTTGAACCATGGCTGAGCGCTGTTGCTCAG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 90 bp CTAGTTCTCCAGACATCAATCACTGAGATGAGAAAGCACAGATATTaGCCCCACATCATAAACCCTTGTGTGGACTCCATCAAATGTCTT +
Preference number: 2 (lower is better)
Translates to: LVLQTSITEMRKHRY*PHIINPCVDSIKCL
Trigger: AAGACATTTGATGGAGTCCACACAAGGGTTTATGATGTGGGGCAAATATCTGTGCTTTCTCATCTCAGTGATTGATGTCTGGAGAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 90 bp GCTGAATGTCAGGGTAAAGTGTCCAATCTTTTGAGCCTCCTCCTTTaGTGGACCTTGTACAAAGTCAAACAAAGAGTAAAGCTGTATCAC +
Preference number: 2 (lower is better)
Translates to: AECQGKVSNLLSLLL*WTLYKVKQRVKLYH
Trigger: GTGATACAGCTTTACTCTTTGTTTGACTTTGTACAAGGTCCACAAAAGGAGGAGGCTCAAAAGATTGGACACTTTACCCTGACATTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 90 bp TTAAACTTTGGCACTATTCGAAATACGGTGCTTCTGTTGTTCCTTTaGGTGCAATCCATAGGAGGTTCCTCATCCTCATTTGGGTGTAAG +
Preference number: 2 (lower is better)
Translates to: LNFGTIRNTVLLLFL*VQSIGGSSSSFGCK
Trigger: CTTACACCCAAATGAGGATGAGGAACCTCCTATGGATTGCACCAAAAGGAACAACAGAAGCACCGTATTTCGAATAGTGCCAAAGTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR TCA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACAGGTTTTCAACATATTTaGCCACTAAGCACTAGGAGT +
Preference number: 2 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTGFQHI*PLSTRS
Trigger: ACTCCTAGTGCTTAGTGGTCAAATATGTTGAAAACC...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR TCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTTGTATGATGAAGGCCTaGAAGGCAGCAATGAAATCA +
Preference number: 2 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSCMMKA*KAAMKS
Trigger: TGATTTCATTGCTGCCTTTCAGGCCTTCATCATACA...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR TCA 90 bp GCAAATTGCAGTAAAGATTCCCTGACACCTGAAAATGCGACCTTTCACCTCACACCTCCAGTTCAAGGCTaGATAATGTCCCATTATTAT +
Preference number: 2 (lower is better)
Translates to: ANCSKDSLTPENATFHLTPPVQG*IMSHYY
Trigger: ATAATAATGGGACATTATTCAGCCTTGAACTGGAGG...TGTGAGGTGAAAGGTCGCATTTTCAGGTGTCAGGGAATCTTTACTGCAATTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611224.1
3UTR-3UTR GCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGATCAAGCCACAGAGGTaGTTCAGTGGTGCTTACTTA +
Preference number: 2 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVIKPQR*FSGAYL
Trigger: TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGAT...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
3UTR-3UTR GCA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACACAGGCAGGAACATCGTaGATTAAGATTTGCATTCAT +
Preference number: 2 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTQAGTS*IKICIH
Trigger: ATGAATGCAAATCTTAATGCACGATGTTCCTGCCTG...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR GCA 90 bp AATGGCGTGATGGATGTACAAATGGGTTCGGAGAACTGGTTTACCAGAATCACAGTCATCAAAGGATGGTaGAGCAAATATATCATCCTC +
Preference number: 2 (lower is better)
Translates to: NGVMDVQMGSENWFTRITVIKGW*SKYIIL
Trigger: GAGGATGATATATTTGCTGCACCATCCTTTGATGAC...TGTGATTCTGGTAAACCAGTTCTCCGAACCCATTTGTACATCCATCACGCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CCA 90 bp TCATTATACAGCGCCTTCACATTGATGGCTATTTCAGTGGCAGTGTCTCTTGTAATGGGTTCGGAGAACTaGTTTACCAGAATCACACTT +
Preference number: 2 (lower is better)
Translates to: SLYSAFTLMAISVAVSLVMGSEN*FTRITL
Trigger: AAGTGTGATTCTGGTAAACCAGTTCTCCGAACCCAT...TACAAGAGACACTGCCACTGAAATAGCCATCAATGTGAAGGCGCTGTATAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR TCA 90 bp TTAGCTGCGAATGTGCACATTGGGCAACTCCAATTTTTCACATGTGAAAAATTAGCAGTAAAGATTCCCTaGCACCTGAAAATGCGACCT +
Preference number: 2 (lower is better)
Translates to: LAANVHIGQLQFFTCEKLAVKIP*HLKMRP
Trigger: AGGTCGCATTTTCAGGTGTCAGGGAATCTTTACTGC...TAATTTTTCACATGTGAAAAATTGGAGTTGCCCAATGTGCACATTCGCAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000611224.1
3UTR-3UTR GCA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACAGAGGTGCTTCAGTGGTaGTTACTTATCTATGCAGAA +
Preference number: 2 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTEVLQW*LLIYAE
Trigger: TTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR GCA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACAAGAATTTTCTTAACGTaGACGCCTACTGCTTATGAT +
Preference number: 2 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTRIFLT*TPTAYD
Trigger: ATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCT...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR GCA 90 bp TCCACTTGCACTGGGACTCCTTCGTCACCAAATATAGTGATTTTCACTGTACGGCTTGAAACTGCCATTTaGATGCTATCAAATATTGCT +
Preference number: 2 (lower is better)
Translates to: STCTGTPSSPNIVIFTVRLETAI*MLSNIA
Trigger: AGCAATATTTGATAGCATGCAAATGGCAGTTTCAAG...CCGTACAGTGAAAATCACTATATTTGGTGACGAAGGAGTCCCAGTGCAAGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CCA 90 bp CCTGGAAGTAGGGAAGCTTTTGGTGGCAATTTGAGTTCATATGTCATTATACTCCCAACATTTTGGTACTaGCTCGTTCCAGTTTCTCTA +
Preference number: 2 (lower is better)
Translates to: PGSREAFGGNLSSYVIILPTFWY*LVPVSL
Trigger: TAGAGAAACTGGAACGAGCCAGTACCAAAATGTTGG...GAGTATAATGACATATGAACTCAAATTGCCACCAAAAGCTTCCCTACTTCCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CAA 90 bp AGAGAGCGGGTGAGTCTGGGTTATCTGTCAGTATATAAATCTCAGTaGACACCTCAGGGAATTCCTGGATATCAACACTTTACTATATTA +
Preference number: 2 (lower is better)
Translates to: RERVSLGYLSVYKSQ*TPQGIPGYQHFTIL
Trigger: TAATATAGTAAAGTGTTGATATCCAGGAATTCCCTGAGGTGTCAACTGAGATTTATATACTGACAGATAACCCAGACTCACCCGCTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 90 bp TTACAGCTAACAGATGATTATTTTTCACAAAACAACTGCTCTTCCTaGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACACATGCTC +
Preference number: 2 (lower is better)
Translates to: LQLTDDYFSQNNCSS*LFIFCWFAQSAHML
Trigger: GAGCATGTGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTTTGTGAAAAATAATCATCTGTTAGCTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR TCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTTATCACAATCCCAAATaGCCTAATCCATCAATTCAC +
Preference number: 2 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSYHNPK*PNPSIH
Trigger: GTGAATTGATGGATTAGGTCATTTGGGATTGTGATA...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR TCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTTTAACAGTCTCAGTCTaGGTTACTCTGTTAAACTTC +
Preference number: 2 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSLTVSV*VTLLNF
Trigger: GAAGTTTAACAGAGTAACTCAGACTGAGACTGTTAA...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR GCA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAAGAGGTGCTTCAGTGGTaGTTACTTATCTATGCAGAA +
Preference number: 2 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCEEVLQW*LLIYAE
Trigger: TTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
3UTR-3UTR GCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACACAAGAACAGCCACTTaGTTCCAAGGACTTTGTATT +
Preference number: 2 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYTRTAT*FQGLCI
Trigger: AATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGT...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
3UTR-3UTR GCA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATAACCACATATTGTTATaGAGTTGCACAGTAGGAACA +
Preference number: 2 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYNHILL*SCTVGT
Trigger: TGTTCCTACTGTGCAACTGCATAACAATATGTGGTT...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 90 bp ATGCACACTTACCTCATGTGGACTTTCATGTGGAATTCTAAGCCTTaGTTTGTGAAAGTACACAAATATAGAGAAGTTCGGGTTTTCTAT +
Preference number: 2 (lower is better)
Translates to: MHTYLMWTFMWNSKP*FVKVHKYREVRVFY
Trigger: ATAGAAAACCCGAACTTCTCTATATTTGTGTACTTTCACAAACAAAGGCTTAGAATTCCACATGAAAGTCCACATGAGGTAAGTGTGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR GCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATACAAGAACAGCCACTTaGTTCCAAGGACTTTGTATT +
Preference number: 2 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYTRTAT*FQGLCI
Trigger: AATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGT...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
3UTR GCA 72 bp AGGCCAGGGAGAACAGGCGCAGCCTGGGAATCTGTGTaGAAAGCCTGCAGCAGTTGTTCGAGCTTCTCGTTT +
Preference number: 3 (lower is better)
Translates to: RPGRTGAAWESV*KACSSCSSFSF
Trigger: AAACGAGAAGCTCGAACAACTGCTGCAGGCTTTGCACACAGATTCCCAGGCTGCGCCTGTTCTCCCTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CAA 90 bp TCTCTTGTAAGACTCTCCGGGCACCTTGGGTTGGCTTTATTCAGGGCATGGGAGCGCTTCACCATCCACTaGCACTGGGACTCCTTCGTC +
Preference number: 3 (lower is better)
Translates to: SLVRLSGHLGLALFRAWERFTIH*HWDSFV
Trigger: GACGAAGGAGTCCCAGTGCAAGTGGATGGTGAAGCG...CTCCCATGCCCTGAATAAAGCCAACCCAAGGTGCCCGGAGAGTCTTACAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR TCA 72 bp GGGTTTCATACACTGGTCAGGCTGGTCTCGAACTCCTaGCCTCCGGTGATCTACCCACCTAAACCTCCCGAA +
Preference number: 3 (lower is better)
Translates to: GFHTLVRLVSNS*PPVIYPPKPPE
Trigger: TTCGGGAGGTTTAGGTGGGTAGATCACCGGAGGTCAGGAGTTCGAGACCAGCCTGACCAGTGTATGAAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR GCA 72 bp AGTCAGGTGCAGGTGGGAACTTCTCACCCCAGCTCATaGATAGATCAAAGCATAGAGGCCCCATCCCACTCC +
Preference number: 3 (lower is better)
Translates to: SQVQVGTSHPSS*IDQSIEAPSHS
Trigger: GGAGTGGGATGGGGCCTCTATGCTTTGATCTATGCATGAGCTGGGGTGAGAAGTTCCCACCTGCACCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR GCA 72 bp GGGAGAAGAGGTGACAATTCCAGCCATTACAGTCATTaGAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGC +
Preference number: 3 (lower is better)
Translates to: GRRGDNSSHYSH*SQVQVGTSHPS
Trigger: GCTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAATTGTCACCTCTTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR GCA 72 bp GGAGGGAGGGCTAGAGAGAGGCTAGCTGTGTTGGTCTaGCAATCTCCTGTGTCCCACACTGGCTACAAAAAT +
Preference number: 3 (lower is better)
Translates to: GGRARERLAVLV*QSPVSHTGYKN
Trigger: ATTTTTGTAGCCAGTGTGGGACACAGGAGATTGGCAGACCAACACAGCTAGCCTCTCTCTAGCCCTCCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR GCA 72 bp AGAACAGGCGCAGCCTGGGAATCTGTGTGCAAAGCCTaGAGCAGTTGTTCGAGCTTCTCGTTTAGGACTGAA +
Preference number: 3 (lower is better)
Translates to: RTGAAWESVCKA*SSCSSFSFRTE
Trigger: TTCAGTCCTAAACGAGAAGCTCGAACAACTGCTGCAGGCTTTGCACACAGATTCCCAGGCTGCGCCTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR GCA 72 bp CTAGTAATGAGCTCCTCTGCAGCCTGGGAGCATAGCTaGATCTGCGACACCTCTTCTGTTGCCAAGTCAATG +
Preference number: 3 (lower is better)
Translates to: LVMSSSAAWEHS*ICDTSSVAKSM
Trigger: CATTGACTTGGCAACAGAAGAGGTGTCGCAGATGCAGCTATGCTCCCAGGCTGCAGAGGAGCTCATTACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CCA 72 bp GCCCGCAACATGATTTCCCTTGGTTTGACGGCTTTCTaGGAGGAAGGTTTTGTAACGTCATCCCCAAGCTGC +
Preference number: 3 (lower is better)
Translates to: ARNMISLGLTAF*EEGFVTSSPSC
Trigger: GCAGCTTGGGGATGACGTTACAAAACCTTCCTCCCAGAAAGCCGTCAAACCAAGGGAAATCATGTTGCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CCA 72 bp GCGTCACATATCCTAGTAATGAGCTCCTCTGCAGCCTaGGAGCATAGCTGCATCTGCGACACCTCTTCTGTT +
Preference number: 3 (lower is better)
Translates to: ASHILVMSSSAA*EHSCICDTSSV
Trigger: AACAGAAGAGGTGTCGCAGATGCAGCTATGCTCCCAGGCTGCAGAGGAGCTCATTACTAGGATATGTGACGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CAA 90 bp TTCCAGCCATTACAGTCATTGCAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGGCACCTCCTGTTTGGTaGCACAGGAAAGTGTTCACA +
Preference number: 3 (lower is better)
Translates to: FQPLQSLQSGAGGNFSPQAPPVW*HRKVFT
Trigger: TGTGAACACTTTCCTGTGCAACCAAACAGGAGGTGC...CTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR CAA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCCCTGGCACCTCCTGTTaGGTTGCACAGGAAAGTGTT +
Preference number: 3 (lower is better)
Translates to: NGTERKYILADGLPFPALPGTSC*VAQESV
Trigger: AACACTTTCCTGTGCAACCAAACAGGAGGTGCCAGG...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR CAA 90 bp GTGGCGATTCCAGCTGCAAAGGAACCCTGCCAACTAGCAAAGATTCTGTTTCATACAGGGAGGTTTTCTTaGCTGGCTGCCACAGCTGGA +
Preference number: 3 (lower is better)
Translates to: VAIPAAKEPCQLAKILFHTGRFS*LAATAG
Trigger: TCCAGCTGTGGCAGCCAGCAAAGAAAACCTCCCTGT...ATGAAACAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGCTGGAATCGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR GCA 72 bp TTCTGGGAGGAAGGTTTTGTAACGTCATCCCCAAGCTaGTCTTTGCTTTCACCCAGGGACTCTTCACTGGAC +
Preference number: 3 (lower is better)
Translates to: FWEEGFVTSSPS*SLLSPRDSSLD
Trigger: GTCCAGTGAAGAGTCCCTGGGTGAAAGCAAAGAGCAGCTTGGGGATGACGTTACAAAACCTTCCTCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CCA 72 bp ATGTTAGAGAGTTCTGGGAACCTGGCACCTCCTGTTTaGTTGCACAGGAAAGTGTTCACAGGAGCAGGACAG +
Preference number: 3 (lower is better)
Translates to: MLESSGNLAPPV*LHRKVFTGAGQ
Trigger: CTGTCCTGCTCCTGTGAACACTTTCCTGTGCAACCAAACAGGAGGTGCCAGGTTCCCAGAACTCTCTAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CCA 72 bp GCTGCATCTGCGACACCTCTTCTGTTGCCAAGTCAATaGCGTGATGGATGTACAAATGGGTTCGGAGAACTG +
Preference number: 3 (lower is better)
Translates to: AASATPLLLPSQ*RDGCTNGFGEL
Trigger: CAGTTCTCCGAACCCATTTGTACATCCATCACGCCATTGACTTGGCAACAGAAGAGGTGTCGCAGATGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CAA 90 bp AATGGCGTGATGGATGTACAAATGGGTTCGGAGAACTGGTTTACCAGAATCACATCGAACTCCCAGCAATaGAGGCAGCCAGTCCTGCTC +
Preference number: 3 (lower is better)
Translates to: NGVMDVQMGSENWFTRITSNSQQ*RQPVLL
Trigger: GAGCAGGACTGGCTGCCTCAATTGCTGGGAGTTCGA...TGTGATTCTGGTAAACCAGTTCTCCGAACCCATTTGTACATCCATCACGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR TCA 72 bp GTCCTGCTCTTAAACCTGGGCAGATTATTCTGGTATTaGGCACAGGGAGGTTTTCTTTGCTGGCTGCCACAG +
Preference number: 3 (lower is better)
Translates to: VLLLNLGRLFWY*AQGGFLCWLPQ
Trigger: CTGTGGCAGCCAGCAAAGAAAACCTCCCTGTGCTCAATACCAGAATAATCTGCCCAGGTTTAAGAGCAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR GCA 72 bp GGAGAGAAACCCATGGCAACCAAGTGCTGTGGGGACTaGTCTGGGAGGCTATTCTATTGGCTAACAATTACT +
Preference number: 3 (lower is better)
Translates to: GEKPMATKCCGD*SGRLFYWLTIT
Trigger: AGTAATTGTTAGCCAATAGAATAGCCTCCCAGAGCAGTCCCCACAGCACTTGGTTGCCATGGGTTTCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR GCA 72 bp GGCCAGTTCTTGCTCCAAAAGACAGTGAATTGTGGCTaGGTCACATATCCTAGTAATGAGCTCCTCTGCAGC +
Preference number: 3 (lower is better)
Translates to: GQFLLQKTVNCG*VTYPSNELLCS
Trigger: GCTGCAGAGGAGCTCATTACTAGGATATGTGACGCAGCCACAATTCACTGTCTTTTGGAGCAAGAACTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CCA 72 bp TGGAGGCTGAACCCACGCTTCACCATCCACTTGCACTaGGACTCCTTCGTCACCAAATATAGTGATTTTCAC +
Preference number: 3 (lower is better)
Translates to: WRLNPRFTIHLH*DSFVTKYSDFH
Trigger: GTGAAAATCACTATATTTGGTGACGAAGGAGTCCCAGTGCAAGTGGATGGTGAAGCGTGGGTTCAGCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CAA 90 bp CCACAGAGTGTAAGGCATTGGATACTCGCTCTTCATGTGGCGATTCCAGCTGCACACAGAACGAAAATGTaGCTCTACAGAAACCATCGG +
Preference number: 3 (lower is better)
Translates to: PQSVRHWILALHVAIPAAHRTKM*LYRNHR
Trigger: CCGATGGTTTCTGTAGAGCAACATTTTCGTTCTGTG...TGCAGCTGGAATCGCCACATGAAGAGCGAGTATCCAATGCCTTACACTCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CAA 90 bp TCCCAGCAATTGAGGCAGCCAGTCCTGCTCTTAAACCTGGGCAGATTATTCTGGGTTTCACATAGCGTCTaGGCAGAAGATATGACCACT +
Preference number: 3 (lower is better)
Translates to: SQQLRQPVLLLNLGRLFWVSHSV*AEDMTT
Trigger: AGTGGTCATATCTTCTGCCAAGACGCTATGTGAAAC...CCAGAATAATCTGCCCAGGTTTAAGAGCAGGACTGGCTGCCTCAATTGCTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CAA 90 bp AGCTGCAAAGGAACCCTGCCAACTAGCAAAGATTCTGTTTCATTATACAGCGCCGCGACACCTCTTCTGTaGCCAAGTCAATGGCGTGAT +
Preference number: 3 (lower is better)
Translates to: SCKGTLPTSKDSVSLYSAATPLL*PSQWRD
Trigger: ATCACGCCATTGACTTGGCAACAGAAGAGGTGTCGC...GGCGCTGTATAATGAAACAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CCA 72 bp AGCTGGGAATGTTCAACACGGCTATGCCTTGCAAGCTaGGAAGAGGAATATACTGCCCATCACACTCAAGTT +
Preference number: 3 (lower is better)
Translates to: SWECSTRLCLAS*EEEYTAHHTQV
Trigger: AACTTGAGTGTGATGGGCAGTATATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTTGAACATTCCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CCA 72 bp GTTTCTGTAATTCCACCTCCACAGAGTGTAAGGCATTaGATACTCGCTCTTCATGTGGCGATTCCAGCTGCA +
Preference number: 3 (lower is better)
Translates to: VSVIPPPQSVRH*ILALHVAIPAA
Trigger: TGCAGCTGGAATCGCCACATGAAGAGCGAGTATCCAATGCCTTACACTCTGTGGAGGTGGAATTACAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CAA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTGAGAGGCTAGCTGTGTaGGTCTGCCAATCTCCTGTG +
Preference number: 3 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSERLAV*VCQSPV
Trigger: CACAGGAGATTGGCAGACCAACACAGCTAGCCTCTC...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR CAA 90 bp TTTGCTGGCTGCCACAGCTGGACCAGGGACAGAATCAGTTTGGGAATGGCCATATACGTCTTTTCTACTTaGGCAACGAAGTCCTTTACA +
Preference number: 3 (lower is better)
Translates to: FAGCHSWTRDRISLGMAIYVFST*ATKSFT
Trigger: TGTAAAGGACTTCGTTGCCAAAGTAGAAAAGACGTA...TATGGCCATTCCCAAACTGATTCTGTCCCTGGTCCAGCTGTGGCAGCCAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CAA 90 bp CAACACGGCTATGCCTTGCAAGCTGGGAAGAGGAATATACTGCCCATCACACTCCAGATTATTCTGGTATaGAGCACAGGGAGGTTTTCT +
Preference number: 3 (lower is better)
Translates to: QHGYALQAGKRNILPITLQIILV*STGRFS
Trigger: AGAAAACCTCCCTGTGCTCAATACCAGAATAATCTG...GAGTGTGATGGGCAGTATATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CAA 90 bp CAACACGGCTATGCCTTGCAAGCTGGGAAGAGGAATATACTGCCCATCACACTCGCCAGTAACATTTTGTaGATAATCGAACTCCCAGCA +
Preference number: 3 (lower is better)
Translates to: QHGYALQAGKRNILPITLASNIL*IIELPA
Trigger: TGCTGGGAGTTCGATTATCAACAAAATGTTACTGGC...GAGTGTGATGGGCAGTATATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CAA 90 bp TTCCAGCCATTACAGTCATTGCAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGATCACACTCTTAAATTaGGGACACATCATAGCTAGA +
Preference number: 3 (lower is better)
Translates to: FQPLQSLQSGAGGNFSPQITLLN*GHIIAR
Trigger: TCTAGCTATGATGTGTCCCAAATTTAAGAGTGTGAT...CTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR CAA 90 bp TTTGCTGGCTGCCACAGCTGGACCAGGGACAGAATCAGTTTGGGAATGGCCATACACTGTTTATTCAAGTaGAGCTTATCGATTTCTGAC +
Preference number: 3 (lower is better)
Translates to: FAGCHSWTRDRISLGMAIHCLFK*SLSISD
Trigger: GTCAGAAATCGATAAGCTCAACTTGAATAAACAGTG...TATGGCCATTCCCAAACTGATTCTGTCCCTGGTCCAGCTGTGGCAGCCAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CAA 90 bp AGCTGCAAAGGAACCCTGCCAACTAGCAAAGATTCTGTTTCATTATACAGCGCCAGGGACAGAATCAGTTaGGGAATGGCCATAACTTGC +
Preference number: 3 (lower is better)
Translates to: SCKGTLPTSKDSVSLYSARDRIS*GMAITC
Trigger: GCAAGTTATGGCCATTCCCAAACTGATTCTGTCCCT...GGCGCTGTATAATGAAACAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CAA 90 bp CCACAGAGTGTAAGGCATTGGATACTCGCTCTTCATGTGGCGATTCCAGCTGCAGCATGCTATCAAATATaGCTACAACTTCCAGGATCT +
Preference number: 3 (lower is better)
Translates to: PQSVRHWILALHVAIPAAACYQI*LQLPGS
Trigger: AGATCCTGGAAGTTGTAGCAATATTTGATAGCATGC...TGCAGCTGGAATCGCCACATGAAGAGCGAGTATCCAATGCCTTACACTCTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CAA 90 bp CCAACTAGCAAAGATTCTGTTTCATTATACAGCGCCTTCACATTGATGGCTATTGACTCTCCGGGCACCTaGGGTTGGCTTTATTCAGGG +
Preference number: 3 (lower is better)
Translates to: PTSKDSVSLYSAFTLMAIDSPGT*GWLYSG
Trigger: CCCTGAATAAAGCCAACCCAAGGTGCCCGGAGAGTC...AATAGCCATCAATGTGAAGGCGCTGTATAATGAAACAGAATCTTTGCTAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR TCA 72 bp ATTTTGGTACTGGCTCGTTCCAGTTTCTCTAGGATCTaGGGAAGTTGGGTGTCATCGTCATATGAACCTCCC +
Preference number: 3 (lower is better)
Translates to: ILVLARSSFSRI*GSWVSSSYEPP
Trigger: GGGAGGTTCATATGACGATGACACCCAACTTCCTCAGATCCTAGAGAAACTGGAACGAGCCAGTACCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR TCA 72 bp ATCTGCGACACCTCTTCTGTTGCCAAGTCAATGGCGTaGTGGATGTACAAATGGGTTCGGAGAACTGGTTTA +
Preference number: 3 (lower is better)
Translates to: ICDTSSVAKSMA*WMYKWVRRTGL
Trigger: TAAACCAGTTCTCCGAACCCATTTGTACATCCATCACGCCATTGACTTGGCAACAGAAGAGGTGTCGCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR TCA 72 bp TTCACAGCATGGGCCAGTTCTTGCTCCAAAAGACAGTaGATTGTGGCTGCGTCACATATCCTAGTAATGAGC +
Preference number: 3 (lower is better)
Translates to: FTAWASSCSKRQ*IVAASHILVMS
Trigger: GCTCATTACTAGGATATGTGACGCAGCCACAATTCACTGTCTTTTGGAGCAAGAACTGGCCCATGCTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CCA 72 bp TCCTGTGTCCCACACTGGCTACAAAAATACAACCACTaGGTAGGTAGGGCTCATCTAGAACCAGAATTAGGA +
Preference number: 3 (lower is better)
Translates to: SCVPHWLQKYNH*VGRAHLEPELG
Trigger: TCCTAATTCTGGTTCTAGATGAGCCCTACCTACCCAGTGGTTGTATTTTTGTAGCCAGTGTGGGACACAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CCA 72 bp TGTTTCTGTGCTGTCATAATCAGAGGACTGATTAGCTaGTTCACAGGGGTGAACTGTCGGGTCATCCATAAC +
Preference number: 3 (lower is better)
Translates to: CFCAVIIRGLIS*FTGVNCRVIHN
Trigger: GTTATGGATGACCCGACAGTTCACCCCTGTGAACCAGCTAATCAGTCCTCTGATTATGACAGCACAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CAA 90 bp TCCACTTGCACTGGGACTCCTTCGTCACCAAATATAGTGATTTTCACTGTACGGACAACTTCCAGGATCTaGTCATCAAAGGATGGTGCA +
Preference number: 3 (lower is better)
Translates to: STCTGTPSSPNIVIFTVRTTSRI*SSKDGA
Trigger: TGCACCATCCTTTGATGACAAGATCCTGGAAGTTGT...CCGTACAGTGAAAATCACTATATTTGGTGACGAAGGAGTCCCAGTGCAAGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR TCA 72 bp GTGAACAGTTGGGTTGCTTCCACTTTTTGGCTCCTATaGATAACGCTGCTACGAACATGGTGTAGAACTGCT +
Preference number: 3 (lower is better)
Translates to: VNSWVASTFWLL*ITLLRTWCRTA
Trigger: AGCAGTTCTACACCATGTTCGTAGCAGCGTTATTCATAGGAGCCAAAAAGTGGAAGCAACCCAACTGTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611224.1
3UTR TCA 72 bp CCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCACATaGCCCACTTTCGGTATCCCCAGATCCTTAAGATCT +
Preference number: 3 (lower is better)
Translates to: PSSLIPWRIRFT*PTFGIPRSLRS
Trigger: AGATCTTAAGGATCTGGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
3UTR GCA 72 bp CTGTTGGTTTGCCCAGAGTGCACACATGCTCATGAATaGACACTTACCTCATGTGGACTTTCATGTGGAATT +
Preference number: 3 (lower is better)
Translates to: LLVCPECTHAHE*TLTSCGLSCGI
Trigger: AATTCCACATGAAAGTCCACATGAGGTAAGTGTGCATTCATGAGCATGTGTGCACTCTGGGCAAACCAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR GCA 72 bp GGGTCATCCATAACTTTTCCGGCTTCCTCAATGACTTaGCTCACTGCTTTCTTTAAACTATTTGCCCGCAAC +
Preference number: 3 (lower is better)
Translates to: GSSITFPASSMT*LTAFFKLFARN
Trigger: GTTGCGGGCAAATAGTTTAAAGAAAGCAGTGAGGCAAGTCATTGAGGAAGCCGGAAAAGTTATGGATGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR TCA 72 bp TGGAAGATCGTGTCAGAAGTCACTGTAGAGAGCGGGTaGGTCTGGGTTATCTGTCAGTATATAAATCTCAGT +
Preference number: 3 (lower is better)
Translates to: WKIVSEVTVESG*VWVICQYINLS
Trigger: ACTGAGATTTATATACTGACAGATAACCCAGACTCACCCGCTCTCTACAGTGACTTCTGACACGATCTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR TCA 72 bp GAGGTCCTGGAAGTAGGGAAGCTTTTGGTGGCAATTTaGGTTCATATGTCATTATACTCCACCTGTCCAACA +
Preference number: 3 (lower is better)
Translates to: EVLEVGKLLVAI*VHMSLYSTCPT
Trigger: TGTTGGACAGGTGGAGTATAATGACATATGAACTCAAATTGCCACCAAAAGCTTCCCTACTTCCAGGACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CCA 72 bp CAAAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTaGTTTGCCCAGAGTGCACACATGCTCATGAATGCA +
Preference number: 3 (lower is better)
Translates to: QNNCSSLLFIFC*FAQSAHMLMNA
Trigger: TGCATTCATGAGCATGTGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CCA 72 bp AATGGCGTGATGGATGTACAAATGGGTTCGGAGAACTaGTTTACCAGAATCACACTTCTGCTTATCTTCCCA +
Preference number: 3 (lower is better)
Translates to: NGVMDVQMGSEN*FTRITLLLIFP
Trigger: TGGGAAGATAAGCAGAAGTGTGATTCTGGTAAACCAGTTCTCCGAACCCATTTGTACATCCATCACGCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CAA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTCCACATCATAAACCCTaGTGTGGACTCCATCAAATG +
Preference number: 3 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSPHHKP*CGLHQM
Trigger: CATTTGATGGAGTCCACACAAGGGTTTATGATGTGG...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR CAA 90 bp GTGGCGATTCCAGCTGCAAAGGAACCCTGCCAACTAGCAAAGATTCTGTTTCATACAGTTATTGATTCTTaGGCACCATCATCTTTAGCT +
Preference number: 3 (lower is better)
Translates to: VAIPAAKEPCQLAKILFHTVIDS*APSSLA
Trigger: AGCTAAAGATGATGGTGCCAAAGAATCAATAACTGT...ATGAAACAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGCTGGAATCGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR TCA 72 bp CTTTCCAGATGCAAAAGTTCAGCCCCTCTGATGTCATaGCGGATGAAGATATCTTTGTACTCTCCCAAATTG +
Preference number: 3 (lower is better)
Translates to: LSRCKSSAPLMS*RMKISLYSPKL
Trigger: CAATTTGGGAGAGTACAAAGATATCTTCATCCGTCATGACATCAGAGGGGCTGAACTTTTGCATCTGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627777.2
3UTR CCA 72 bp CCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTaGTGCTTACTTATCTATGCAGAAAACTACAAGAAC +
Preference number: 3 (lower is better)
Translates to: PTAKYQATEVLQ*CLLIYAENYKN
Trigger: GTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
3UTR CCA 72 bp ATGTCATTATACTCCACCTGTCCAACATTTTGGTACTaGCTCGTTCCAGTTTCTCTAGGATCTGAGGAAGTT +
Preference number: 3 (lower is better)
Translates to: MSLYSTCPTFWY*LVPVSLGSEEV
Trigger: AACTTCCTCAGATCCTAGAGAAACTGGAACGAGCCAGTACCAAAATGTTGGACAGGTGGAGTATAATGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CAA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTAGAAAGCACAGATATTaGCCCCACATCATAAACCCT +
Preference number: 3 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSRKHRY*PHIINP
Trigger: AGGGTTTATGATGTGGGGCAAATATCTGTGCTTTCT...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR CAA 90 bp TCAATGTTTGCCAGTAACATTTTGTTGATAATCGAACTCCCAGCAATTGAGGCAATGATTTCCCTTGGTTaGACGGCTTTCTGGGAGGAA +
Preference number: 3 (lower is better)
Translates to: SMFASNILLIIELPAIEAMISLG*TAFWEE
Trigger: TTCCTCCCAGAAAGCCGTCAAACCAAGGGAAATCAT...TGCCTCAATTGCTGGGAGTTCGATTATCAACAAAATGTTACTGGCAAACATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CAA 90 bp AACCTTTTCCTTTTTAAACTTTGGCACTATTCGAAATACGGTGCTTCTGTTGTTCAACACGGCTATGCCTaGCAAGCTGGGAAGAGGAAT +
Preference number: 3 (lower is better)
Translates to: NLFLFKLWHYSKYGASVVQHGYA*QAGKRN
Trigger: ATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTTG...AACAACAGAAGCACCGTATTTCGAATAGTGCCAAAGTTTAAAAAGGAAAAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR TCA 72 bp GTGATGAATGAGTTTCAGCTCATTGCTGGAGTTAGCTaGAGAATGAATAGGACACAGTGGATGAAGGAACAA +
Preference number: 3 (lower is better)
Translates to: VMNEFQLIAGVS*RMNRTQWMKEQ
Trigger: TTGTTCCTTCATCCACTGTGTCCTATTCATTCTTCAGCTAACTCCAGCAATGAGCTGAAACTCATTCATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR TCA 72 bp AAGGCCTCCTATTACAATGGCATCATATTACTGACTTaGCACAGAGGTTGCTATACAAAAGTCAATCAGGGG +
Preference number: 3 (lower is better)
Translates to: KASYYNGIILLT*HRGCYTKVNQG
Trigger: CCCCTGATTGACTTTTGTATAGCAACCTCTGTGTCAAGTCAGTAATATGATGCCATTGTAATAGGAGGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR TCA 72 bp AAAGAATACCATTCCACAGTCAGAGAACGCAGTCAGTaGTCCATGCTCTGGATTAAACATTCAGAACTCAGT +
Preference number: 3 (lower is better)
Translates to: KEYHSTVRERSQ*SMLWIKHSELS
Trigger: ACTGAGTTCTGAATGTTTAATCCAGAGCATGGATCACTGACTGCGTTCTCTGACTGTGGAATGGTATTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR TCA 72 bp ACAGTGACCTGTCAGAATTTCCCTCCAGTTCAAGGCTaGATAATGTCCCATTATTATATGTGTGTGCCACAT +
Preference number: 3 (lower is better)
Translates to: TVTCQNFPPVQG*IMSHYYMCVPH
Trigger: ATGTGGCACACACATATAATAATGGGACATTATTCAGCCTTGAACTGGAGGGAAATTCTGACAGGTCACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611224.1
3UTR GCA 72 bp ACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTaGTTACTTATCTATGCAGAAAACTACAAGAACAGC +
Preference number: 3 (lower is better)
Translates to: TAKYQATEVLQW*LLIYAENYKNS
Trigger: GCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
3UTR GCA 72 bp GAAAGGCTTAGCAAGTTTAAGAAAATCTCCTTGGTCTaGAGGGTATGGTCTGATCCACATTTACTGGTGTTT +
Preference number: 3 (lower is better)
Translates to: ERLSKFKKISLV*RVWSDPHLLVF
Trigger: AAACACCAGTAAATGTGGATCAGACCATACCCTGCAGACCAAGGAGATTTTCTTAAACTTGCTAAGCCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR CAA 90 bp TTAGCTGCGAATGTGCACATTGGGCAACTCCAATTTTTCACATGTGAAAAATTAAGAACTGCTTCACAATaGTATTGTTTTCGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: LAANVHIGQLQFFTCEKLRTASQ*YCFRLG
Trigger: GCCCAGCCGAAAACAATACAATTGTGAAGCAGTTCT...TAATTTTTCACATGTGAAAAATTGGAGTTGCCCAATGTGCACATTCGCAGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000611224.1
3UTR-3UTR CAA 90 bp TTAGCTGCGAATGTGCACATTGGGCAACTCCAATTTTTCACATGTGAAAAATTAGGTTGCTTCCACTTTTaGGCTCCTATGAATAACGCT +
Preference number: 3 (lower is better)
Translates to: LAANVHIGQLQFFTCEKLGCFHF*APMNNA
Trigger: AGCGTTATTCATAGGAGCCAAAAAGTGGAAGCAACC...TAATTTTTCACATGTGAAAAATTGGAGTTGCCCAATGTGCACATTCGCAGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000611224.1
3UTR TCA 72 bp GCTAATCGTTTGAGAAATTTTGCTAAAGGAAGATTTTaGTTCGGTAGATCTGCAGTGGGCCTGAAATTCTGC +
Preference number: 3 (lower is better)
Translates to: ANRLRNFAKGRF*FGRSAVGLKFC
Trigger: GCAGAATTTCAGGCCCACTGCAGATCTACCGAATCAAAATCTTCCTTTAGCAAAATTTCTCAAACGATTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR GCA 72 bp AAATTTCACCCACAGCAAAATATCAAGCCACAGAGGTaGTTCAGTGGTGCTTACTTATCTATGCAGAAAACT +
Preference number: 3 (lower is better)
Translates to: KFHPQQNIKPQR*FSGAYLSMQKT
Trigger: AGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
3UTR GCA 72 bp AAAGTTTCAATATACTATAGGCATGGAGAAAATACCTaGCTAGGGAAGTCAGGTAGGGCTTCACAGAAAGTT +
Preference number: 3 (lower is better)
Translates to: KVSIYYRHGENT*LGKSGRASQKV
Trigger: AACTTTCTGTGAAGCCCTACCTGACTTCCCTAGGCAGGTATTTTCTCCATGCCTATAGTATATTGAAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CCA 72 bp AAATGTGAGTTCACATTCTACAGATCTATCAGTCACTaGGATCACATGTACGGCTGTGGAAATAGGATTGAT +
Preference number: 3 (lower is better)
Translates to: KCEFTFYRSISH*DHMYGCGNRID
Trigger: ATCAATCCTATTTCCACAGCCGTACATGTGATCCCAGTGACTGATAGATCTGTAGAATGTGAACTCACATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR CAA 90 bp CTTTGTTCTAAATTCTTGTACGATCTCTGTAATAACTCCCGGGTTCCAAGGACTTTTGCCAGTAACATTTaGTTGATAATCGAACTCCCA +
Preference number: 3 (lower is better)
Translates to: LCSKFLYDLCNNSRVPRTFASNI*LIIELP
Trigger: TGGGAGTTCGATTATCAACAAAATGTTACTGGCAAA...AGTCCTTGGAACCCGGGAGTTATTACAGAGATCGTACAAGAATTTAGAACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CAA 90 bp AACCTTTTCCTTTTTAAACTTTGGCACTATTCGAAATACGGTGCTTCTGTTGTTACAGAGTGTAAGGCATaGGATACTCGCTCTTCATGT +
Preference number: 3 (lower is better)
Translates to: NLFLFKLWHYSKYGASVVTECKA*DTRSSC
Trigger: ACATGAAGAGCGAGTATCCAATGCCTTACACTCTGT...AACAACAGAAGCACCGTATTTCGAATAGTGCCAAAGTTTAAAAAGGAAAAGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR TCA 72 bp TTAGGAAGGCCTCCTATTACAATGGCATCATATTACTaGCTTGACACAGAGGTTGCTATACAAAAGTCAATC +
Preference number: 3 (lower is better)
Translates to: LGRPPITMASYY*LDTEVAIQKSI
Trigger: GATTGACTTTTGTATAGCAACCTCTGTGTCAAGTCAGTAATATGATGCCATTGTAATAGGAGGCCTTCCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR TCA 72 bp AGCAACTGTTTAAAGCGACGGAGGAACTTTACTCCCTaGTTATCTCCACTCTTAGAATTGACAAAAACCAAT +
Preference number: 3 (lower is better)
Translates to: SNCLKRRRNFTP*LSPLLELTKTN
Trigger: ATTGGTTTTTGTCAATTCTAAGAGTGGAGATAATCAGGGAGTAAAGTTCCTCCGTCGCTTTAAACAGTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR GCA 72 bp AACCTAGGAAGTTTTAACCACATATTGTTATGCAGTTaGACAGTAGGAACATTCCATCAGACCAGATCTATG +
Preference number: 3 (lower is better)
Translates to: NLGSFNHILLCS*TVGTFHQTRSM
Trigger: CATAGATCTGGTCTGATGGAATGTTCCTACTGTGCAACTGCATAACAATATGTGGTTAAAACTTCCTAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
3UTR GCA 72 bp ATTCATTCAATGTGTGTGTACTGCTATGTGTCCTCATaGATGAGCTATGTCAACAAGGACAATCTACTGATA +
Preference number: 3 (lower is better)
Translates to: IHSMCVYCYVSS*MSYVNKDNLLI
Trigger: TATCAGTAGATTGTCCTTGTTGACATAGCTCATGCATGAGGACACATAGCAGTACACACACATTGAATGAAT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR GCA 72 bp GAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTaGTTAGGAGTTAGTTTGCTATTCTGTAATTTAGAG +
Preference number: 3 (lower is better)
Translates to: EERGKVIDTDSS*LGVSLLFCNLE
Trigger: CTCTAAATTACAGAATAGCAAACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR-3UTR CAA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATTACAAGAACAGCCACTaGCTTCCAAGGACTTTGTAT +
Preference number: 3 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYYKNSH*LPRTLY
Trigger: ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTA...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
3UTR-3UTR CAA 90 bp CCAACTAGCAAAGATTCTGTTTCATTATACAGCGCCTTCACATTGATGGCTATTTCTCCACTCTTAGAATaGACAAAAACCAATAGAGGA +
Preference number: 3 (lower is better)
Translates to: PTSKDSVSLYSAFTLMAISPLLE*TKTNRG
Trigger: TCCTCTATTGGTTTTTGTCAATTCTAAGAGTGGAGA...AATAGCCATCAATGTGAAGGCGCTGTATAATGAAACAGAATCTTTGCTAGTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR-3UTR CAA 90 bp CCAACTAGCAAAGATTCTGTTTCATTATACAGCGCCTTCACATTGATGGCTATTGCATGTTCATCAGAATaGAGGATTTTTGTAAGATGC +
Preference number: 3 (lower is better)
Translates to: PTSKDSVSLYSAFTLMAIACSSE*RIFVRC
Trigger: GCATCTTACAAAAATCCTCAATTCTGATGAACATGC...AATAGCCATCAATGTGAAGGCGCTGTATAATGAAACAGAATCTTTGCTAGTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR TCA 72 bp GTGCCAAGTATAGAGCAGGTAGAAAAGTCTATCAAGTaGATGAAGGAACAGGGCATTTCAGTTAATTACAAT +
Preference number: 3 (lower is better)
Translates to: VPSIEQVEKSIK*MKEQGISVNYN
Trigger: ATTGTAATTAACTGAAATGCCCTGTTCCTTCATTCACTTGATAGACTTTTCTACCTGCTCTATACTTGGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CCA 72 bp AACTTTAGCAAATTTGTTTTAGAGAGACCACTCTGGTaGGAAAGAGTGAAAGTAGAAAAACTAGTTGCTGGA +
Preference number: 3 (lower is better)
Translates to: NFSKFVLERPLW*ERVKVEKLVAG
Trigger: TCCAGCAACTAGTTTTTCTACTTTCACTCTTTCCCACCAGAGTGGTCTCTCTAAAACAAATTTGCTAAAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR GCA 72 bp GAAAGTAAACATTTTGCAATTCCACTGTTTAGACAATaGAATCGTCTCAGATTCCTCCTACCTTATTACCAT +
Preference number: 3 (lower is better)
Translates to: ESKHFAIPLFRQ*NRLRFLLPYYH
Trigger: ATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTTTACTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
3UTR CCA 72 bp TATCAATTTGAACTTCTAATTTCTAACCTCACTGTCTaGGAAGTCTATCTTTATATCCAAAATGACCGTGGG +
Preference number: 3 (lower is better)
Translates to: YQFELLISNLTV*EVYLYIQNDRG
Trigger: CCCACGGTCATTTTGGATATAAAGATAGACTTCCCAGACAGTGAGGTTAGAAATTAGAAGTTCAAATTGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR TCA 72 bp ATTACTTTCAGCAAAGTACAAAAATACACACGTCAGTaGCTTCCGTACAATAAATACATAATCATGCATCCC +
Preference number: 3 (lower is better)
Translates to: ITFSKVQKYTRQ*LPYNKYIIMHP
Trigger: GGGATGCATGATTATGTATTTATTGTACGGAAGTCACTGACGTGTGTATTTTTGTACTTTGCTGAAAGTAAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp GGAACTTCTCACCCCAGCTCATGCATAGATCAAAGCATAGAGGCCCCATCCCACCCCGGAGGGTGGTGCTaGCCTCCGGCCCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: GTSHPSSCIDQSIEAPSHPGGWC*PPAPAI
Trigger: GATGGCAGGGGCCGGAGGCCAGCACCACCCTCCGGG...GTGGGATGGGGCCTCTATGCTTTGATCTATGCATGAGCTGGGGTGAGAAGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 72 bp GCTGGCTGCCACAGCTGGACCAGGGACAGAATCAGTTaGGGAATGGCCATAACTTGCCCGGGCATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: AGCHSWTRDRIS*GMAITCPGIWR
Trigger: TCTCCAGATGCCCGGGCAAGTTATGGCCATTCCCAAACTGATTCTGTCCCTGGTCCAGCTGTGGCAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CCA 90 bp GGAACTTCTCACCCCAGCTCATGCATAGATCAAAGCATAGAGGCCCCATCCCACACACGTTACAGAAGGTaGGTCGGGCGTGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GTSHPSSCIDQSIEAPSHTRYRR*VGRGSR
Trigger: CCTGCTCCCACGCCCGACCCACCTTCTGTAACGTGT...GTGGGATGGGGCCTCTATGCTTTGATCTATGCATGAGCTGGGGTGAGAAGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CCTGGGAGCATAGCTGCATCTGCGACACCTCTTCTGTTGCCAAGTCAATGGCGTCCGGGCACCTTGGGTTaGCTTTATTCAGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: PGSIAASATPLLLPSQWRPGTLG*LYSGHG
Trigger: CCCATGCCCTGAATAAAGCCAACCCAAGGTGCCCGG...ACGCCATTGACTTGGCAACAGAAGAGGTGTCGCAGATGCAGCTATGCTCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR GCA 90 bp GAGCACAGGGAGGTTTTCTTTGCTGGCTGCCACAGCTGGACCAGGGACAGAATCGAGCATAGCTGCATCTaGGACACCTCTTCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: EHREVFFAGCHSWTRDRIEHSCI*DTSSVA
Trigger: GGCAACAGAAGAGGTGTCGCAGATGCAGCTATGCTC...GATTCTGTCCCTGGTCCAGCTGTGGCAGCCAGCAAAGAAAACCTCCCTGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR GCA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACCTGGCCTCCGGCCCCTaGCATCCTCTCCGACTCCGG +
Preference number: 4 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHLASGP*HPLRLR
Trigger: CCGGAGTCGGAGAGGATGGCAGGGGCCGGAGGCCAG...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379274.6
CDS-3UTR CCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGCCCGGAGGGTGGTGCTaGCCTCCGGCCCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRPGGWC*PPAPAI
Trigger: GATGGCAGGGGCCGGAGGCCAGCACCACCCTCCGGG...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CCA 90 bp CCCAGATCCTTAAGATCTCGCCTTTCCAGATGCAAAAGTTCAGCCCCTCTGATGAAGGTGGGTCGGGCGTaGGAGCAGGCGTACCAGTTG +
Preference number: 4 (lower is better)
Translates to: PRSLRSRLSRCKSSAPLMKVGRA*EQAYQL
Trigger: CAACTGGTACGCCTGCTCCCACGCCCGACCCACCTT...CATCAGAGGGGCTGAACTTTTGCATCTGGAAAGGCGAGATCTTAAGGATCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CCA 90 bp TCCCAGCAATTGAGGCAGCCAGTCCTGCTCTTAAACCTGGGCAGATTATTCTGGACACGTTACAGAAGGTaGGTCGGGCGTGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SQQLRQPVLLLNLGRLFWTRYRR*VGRGSR
Trigger: CCTGCTCCCACGCCCGACCCACCTTCTGTAACGTGT...CCAGAATAATCTGCCCAGGTTTAAGAGCAGGACTGGCTGCCTCAATTGCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CCA 90 bp TTTGCTGGCTGCCACAGCTGGACCAGGGACAGAATCAGTTTGGGAATGGCCATAAGCTCCTCTGCAGCCTaGGAGCATAGCTGCATCTGC +
Preference number: 4 (lower is better)
Translates to: FAGCHSWTRDRISLGMAISSSAA*EHSCIC
Trigger: GCAGATGCAGCTATGCTCCCAGGCTGCAGAGGAGCT...TATGGCCATTCCCAAACTGATTCTGTCCCTGGTCCAGCTGTGGCAGCCAGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp GGAACTTCTCACCCCAGCTCATGCATAGATCAAAGCATAGAGGCCCCATCCCACACAGGCCATGGGAGGTaGCTCCAGAAAGACTCTCTC +
Preference number: 4 (lower is better)
Translates to: GTSHPSSCIDQSIEAPSHTGHGR*LQKDSL
Trigger: GAGAGAGTCTTTCTGGAGTCACCTCCCATGGCCTGT...GTGGGATGGGGCCTCTATGCTTTGATCTATGCATGAGCTGGGGTGAGAAGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp TTCCAGCCATTACAGTCATTGCAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGGCTGGTTCACAGGGGTaGACTGTCGGGTCATCCATA +
Preference number: 4 (lower is better)
Translates to: FQPLQSLQSGAGGNFSPQAGSQG*TVGSSI
Trigger: TATGGATGACCCGACAGTTCACCCCTGTGAACCAGC...CTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp GGAACTTCTCACCCCAGCTCATGCATAGATCAAAGCATAGAGGCCCCATCCCACGTCTTGGTCCGGATCTaGCCCGAGGTAGACACTTTG +
Preference number: 4 (lower is better)
Translates to: GTSHPSSCIDQSIEAPSHVLVRI*PEVDTL
Trigger: CAAAGTGTCTACCTCGGGGCAGATCCGGACCAAGAC...GTGGGATGGGGCCTCTATGCTTTGATCTATGCATGAGCTGGGGTGAGAAGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp GGAACTTCTCACCCCAGCTCATGCATAGATCAAAGCATAGAGGCCCCATCCCACCACTTACAGGCAGGTTaGCCTCAAGCCACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: GTSHPSSCIDQSIEAPSHHLQAG*PQATGE
Trigger: CTCACCAGTGGCTTGAGGGCAACCTGCCTGTAAGTG...GTGGGATGGGGCCTCTATGCTTTGATCTATGCATGAGCTGGGGTGAGAAGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp TTCCAGCCATTACAGTCATTGCAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGGCCTGGGAGCATAGCTaGATCTGCGACACCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FQPLQSLQSGAGGNFSPQAWEHS*ICDTSS
Trigger: AGAAGAGGTGTCGCAGATGCAGCTATGCTCCCAGGC...CTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCTCGCCCAGGCTGGAGTaGAGTGGCGAGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: NGTERKYILADGLPFPALSPRLE*SGEILA
Trigger: AGCCAAGATCTCGCCACTGCACTCCAGCCTGGGCGA...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGGCGTTGGTCAGCGGGTaGGCTCTGCCCGAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQALVSG*ALPERS
Trigger: GCTCCGCTCGGGCAGAGCCCACCCGCTGACCAACGC...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337343.9
CDS-3UTR GCA 90 bp TCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCCACTTACAGGCAGGTTaGCCTCAAGCCACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SPKLSRSSQAATSSVPHFHLQAG*PQATGE
Trigger: CTCACCAGTGGCTTGAGGGCAACCTGCCTGTAAGTG...GAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR GCA 90 bp GAGCACAGGGAGGTTTTCTTTGCTGGCTGCCACAGCTGGACCAGGGACAGAATCGCTGCAAAGGAACCCTaGCAACTAGCAAAGATTCTG +
Preference number: 4 (lower is better)
Translates to: EHREVFFAGCHSWTRDRIAAKEP*QLAKIL
Trigger: CAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGC...GATTCTGTCCCTGGTCCAGCTGTGGCAGCCAGCAAAGAAAACCTCCCTGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACCCGGAGGGTGGTGCTaGCCTCCGGCCCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKPGGWC*PPAPAI
Trigger: GATGGCAGGGGCCGGAGGCCAGCACCACCCTCCGGG...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CCA 90 bp GAGCACAGGGAGGTTTTCTTTGCTGGCTGCCACAGCTGGACCAGGGACAGAATCAGAGGACTGATTAGCTaGTTCACAGGGGTGAACTGT +
Preference number: 4 (lower is better)
Translates to: EHREVFFAGCHSWTRDRIRGLIS*FTGVNC
Trigger: ACAGTTCACCCCTGTGAACCAGCTAATCAGTCCTCT...GATTCTGTCCCTGGTCCAGCTGTGGCAGCCAGCAAAGAAAACCTCCCTGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CAA 72 bp TTAGAGAGTTCTGGGAACCTGGCACCTCCTGTTTGGTaGCACAGGAAAGTGTTCACAGGAGCAGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: LESSGNLAPPVW*HRKVFTGAGQH
Trigger: GTGCTGTCCTGCTCCTGTGAACACTTTCCTGTGCAACCAAACAGGAGGTGCCAGGTTCCCAGAACTCTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 72 bp CCTGGGAGCATAGCTGCATCTGCGACACCTCTTCTGTaGCCAAGTCAATGGCGTGATGGATGTACAAATGGG +
Preference number: 4 (lower is better)
Translates to: PGSIAASATPLL*PSQWRDGCTNG
Trigger: CCCATTTGTACATCCATCACGCCATTGACTTGGCAACAGAAGAGGTGTCGCAGATGCAGCTATGCTCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp TTCCAGCCATTACAGTCATTGCAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGTGCGGCCTCGAAGTTTaGAGTATCGCTTTTTCCACC +
Preference number: 4 (lower is better)
Translates to: FQPLQSLQSGAGGNFSPQCGLEV*SIAFST
Trigger: GGTGGAAAAAGCGATACTTCAAACTTCGAGGCCGCA...CTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp TCGCTTCACATGACCCACTTTCGGTATCCCCAGATCCTTAAGATCTCGCCTTTCACAGGCCATGGGAGGTaGCTCCAGAAAGACTCTCTC +
Preference number: 4 (lower is better)
Translates to: SLHMTHFRYPQILKISPFTGHGR*LQKDSL
Trigger: GAGAGAGTCTTTCTGGAGTCACCTCCCATGGCCTGT...GAAAGGCGAGATCTTAAGGATCTGGGGATACCGAAAGTGGGTCATGTGAAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR TCA 90 bp ATCAGTTTGGGAATGGCCATAACTTGCCCGGGCATCTGGAGACCGAGGTGCAGTAGTTTCTCTAGGATCTaGGGAAGTTGGGTGTCATCG +
Preference number: 4 (lower is better)
Translates to: ISLGMAITCPGIWRPRCSSFSRI*GSWVSS
Trigger: CGATGACACCCAACTTCCTCAGATCCTAGAGAAACT...ACTGCACCTCGGTCTCCAGATGCCCGGGCAAGTTATGGCCATTCCCAAACTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp TCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATCCCCAGATCCTTAAGATAATCCCTGGAGGCTaGACCCACGCTTCACCATCC +
Preference number: 4 (lower is better)
Translates to: SLENSLHMTHFRYPQILKIIPGG*THASPS
Trigger: GGATGGTGAAGCGTGGGTTCAGCCTCCAGGGATTAT...CTTAAGGATCTGGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR TCA 90 bp TTCCAGCCATTACAGTCATTGCAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGACAGCGCCTTCACATTaGTGGCTATTTCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: FQPLQSLQSGAGGNFSPQTAPSH*WLFQWQ
Trigger: CTGCCACTGAAATAGCCATCAATGTGAAGGCGCTGT...CTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp TTCCAGCCATTACAGTCATTGCAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGAGAATTCGCTTCACATaGCCCACTTTCGGTATCCCC +
Preference number: 4 (lower is better)
Translates to: FQPLQSLQSGAGGNFSPQRIRFT*PTFGIP
Trigger: GGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCT...CTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCCCCCGATCCTCCAGGTaGGGAAGAGCCTATCAGGGA +
Preference number: 4 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIPRSSR*GRAYQG
Trigger: TCCCTGATAGGCTCTTCCTCACCTGGAGGATCGGGG...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCGGCTCACTGCAGCCTTaGACTCCTGGTCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: NGTERKYILADGLPFPALGSLQP*TPGLKQ
Trigger: TTGCTTGAGACCAGGAGTTCAAGGCTGCAGTGAGCC...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGCTGGCCTCCGGCCCCTaGCATCCTCTCCGACTCCTG +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVLASGP*HPLRLL
Trigger: CAGGAGTCGGAGAGGATGGCAGGGGCCGGAGGCCAG...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAACTGGCCTCCGGCCCCTaGCATCCTCTCCGACTCCTG +
Preference number: 4 (lower is better)
Translates to: SGAYLSMQKTTRTATCFQLASGP*HPLRLL
Trigger: CAGGAGTCGGAGAGGATGGCAGGGGCCGGAGGCCAG...TTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp TTCCAGCCATTACAGTCATTGCAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGTCTGTGTGCAAAGCCTaGAGCAGTTGTTCGAGCTTC +
Preference number: 4 (lower is better)
Translates to: FQPLQSLQSGAGGNFSPQSVCKA*SSCSSF
Trigger: GAAGCTCGAACAACTGCTGCAGGCTTTGCACACAGA...CTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACTACCAAAGTTAAGAGGAATGGCCATAACTTaGCCGGGCATCTGGAGACCG +
Preference number: 4 (lower is better)
Translates to: PAKQQLPLCPISELPKLRGMAIT*PGIWRP
Trigger: CGGTCTCCAGATGCCCGGGCAAGTTATGGCCATTCC...TCTTAACTTTGGTAGTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR GCA 90 bp GCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACTACCAAAGGAGCATAGCTGCATCTaGGACACCTCTTCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: ADPAKQQLPLCPISELPKEHSCI*DTSSVA
Trigger: GGCAACAGAAGAGGTGTCGCAGATGCAGCTATGCTC...CTTTGGTAGTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR GCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGCGCTCCAGGGCAAGCTaGGCCGGGCACCGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRRSRAS*AGHRFF
Trigger: GAAGAAACGGTGCCCGGCGCAGCTTGCCCTGGAGCG...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379274.6
CDS-3UTR GCA 90 bp GACCTTTCACCTCACAGTGACCTGTCAGAATTTCCCTCCAGTTCAAGGCTGAATCCCTTGGTCCGGATCTaGCCCGAGGTAGACACTTTG +
Preference number: 4 (lower is better)
Translates to: DLSPHSDLSEFPSSSRLNPLVRI*PEVDTL
Trigger: CAAAGTGTCTACCTCGGGGCAGATCCGGACCAAGGG...ATTCAGCCTTGAACTGGAGGGAAATTCTGACAGGTCACTGTGAGGTGAAAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611224.1
CDS-3UTR CCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCTTGCGGATCAGTTTCTaGGGTCCCTCTTGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: NGTERKYILADGLPFPALLRISF*GPSCSA
Trigger: AGCGGAGCAAGAGGGACCCCAGAAACTGATCCGCAA...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAGGTGGGTCGGGCGTaGGAGCAGGCGTACCAGTTG +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQKVGRA*EQAYQL
Trigger: CAACTGGTACGCCTGCTCCCACGCCCGACCCACCTT...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CCCAGATCCTTAAGATCTCGCCTTTCCAGATGCAAAAGTTCAGCCCCTCTGATGACTTGCCCGGGCATCTaGAGACCGAGGTGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: PRSLRSRLSRCKSSAPLMTCPGI*RPRCSF
Trigger: AAAACTGCACCTCGGTCTCCAGATGCCCGGGCAAGT...CATCAGAGGGGCTGAACTTTTGCATCTGGAAAGGCGAGATCTTAAGGATCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CCA 90 bp AATCAGTTTGGGAATGGCCATAACTTGCCCGGGCATCTGGAGACCGAGGTGCAGCTATGCCTTGCAAGCTaGGAAGAGGAATATACTGCC +
Preference number: 4 (lower is better)
Translates to: NQFGNGHNLPGHLETEVQLCLAS*EEEYTA
Trigger: GGCAGTATATTCCTCTTCCCAGCTTGCAAGGCATAG...CTGCACCTCGGTCTCCAGATGCCCGGGCAAGTTATGGCCATTCCCAAACTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CCA 90 bp TTCCAGCCATTACAGTCATTGCAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGTACTCGCTCTTCATGTaGCGATTCCAGCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: FQPLQSLQSGAGGNFSPQYSLFM*RFQLQR
Trigger: CCTTTGCAGCTGGAATCGCCACATGAAGAGCGAGTA...CTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp TCCCAGCAATTGAGGCAGCCAGTCCTGCTCTTAAACCTGGGCAGATTATTCTGGTTACACCTCCGACTGTaGAGTGCTCCTTCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: SQQLRQPVLLLNLGRLFWLHLRL*SAPSKL
Trigger: GAGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAA...CCAGAATAATCTGCCCAGGTTTAAGAGCAGGACTGGCTGCCTCAATTGCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CCA 90 bp GGAACTTCTCACCCCAGCTCATGCATAGATCAAAGCATAGAGGCCCCATCCCACTGGGGTTTCATACACTaGTCAGGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: GTSHPSSCIDQSIEAPSHWGFIH*SGWSRT
Trigger: AGTTCGAGACCAGCCTGACCAGTGTATGAAACCCCA...GTGGGATGGGGCCTCTATGCTTTGATCTATGCATGAGCTGGGGTGAGAAGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACTACCAAAGCAGACTTCAGTGAGCTaGTCCAATCCTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: ADPAKQQLPLCPISELPKQTSVS*SNPPSP
Trigger: AGGAGATGGAGGATTGGATCAGCTCACTGAAGTCTG...CTTTGGTAGTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR TCA 90 bp TCTCTTGTAAGACTCTCCGGGCACCTTGGGTTGGCTTTATTCAGGGCATGGGAGCTGTACAGACTTCAGTaGGCTGATCCAATCCTCCAT +
Preference number: 4 (lower is better)
Translates to: SLVRLSGHLGLALFRAWELYRLQ*ADPILH
Trigger: ATGGAGGATTGGATCAGCTCACTGAAGTCTGTACAG...CTCCCATGCCCTGAATAAAGCCAACCCAAGGTGCCCGGAGAGTCTTACAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp TCTCTTGTAAGACTCTCCGGGCACCTTGGGTTGGCTTTATTCAGGGCATGGGAGGGCAACACTCCCAGCTaGCACTGTTTATTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: SLVRLSGHLGLALFRAWEGNTPS*HCLFKL
Trigger: CAACTTGAATAAACAGTGTCAGCTGGGAGTGTTGCC...CTCCCATGCCCTGAATAAAGCCAACCCAAGGTGCCCGGAGAGTCTTACAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp TTCCAGCCATTACAGTCATTGCAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGAGTTTCTCTAGGATCTaGGGAAGTTGGGTGTCATCG +
Preference number: 4 (lower is better)
Translates to: FQPLQSLQSGAGGNFSPQSFSRI*GSWVSS
Trigger: CGATGACACCCAACTTCCTCAGATCCTAGAGAAACT...CTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AATGTTCAACACGGCTATGCCTTGCAAGCTGGGAAGAGGAATATACTGCCCATCGCTGGTTCACAGGGGTaGACTGTCGGGTCATCCATA +
Preference number: 4 (lower is better)
Translates to: NVQHGYALQAGKRNILPIAGSQG*TVGSSI
Trigger: TATGGATGACCCGACAGTTCACCCCTGTGAACCAGC...GATGGGCAGTATATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTTGAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp TTCCAGCCATTACAGTCATTGCAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGGCCAAGTCAATGGCGTaGTGGATGTACAAATGGGTT +
Preference number: 4 (lower is better)
Translates to: FQPLQSLQSGAGGNFSPQAKSMA*WMYKWV
Trigger: AACCCATTTGTACATCCATCACGCCATTGACTTGGC...CTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp TCCCAGCAATTGAGGCAGCCAGTCCTGCTCTTAAACCTGGGCAGATTATTCTGGACAGCGCCTTCACATTaGTGGCTATTTCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SQQLRQPVLLLNLGRLFWTAPSH*WLFQWQ
Trigger: CTGCCACTGAAATAGCCATCAATGTGAAGGCGCTGT...CCAGAATAATCTGCCCAGGTTTAAGAGCAGGACTGGCTGCCTCAATTGCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTACCCCGATCCTCCAGGTaGGGAAGAGCCTATCAGGGA +
Preference number: 4 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLPRSSR*GRAYQG
Trigger: TCCCTGATAGGCTCTTCCTCACCTGGAGGATCGGGG...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp TTCCAGCCATTACAGTCATTGCAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGAGCAAGGGTGATGAATaGGTTTCAGCTCATTGCTGG +
Preference number: 4 (lower is better)
Translates to: FQPLQSLQSGAGGNFSPQSKGDE*VSAHCW
Trigger: CCAGCAATGAGCTGAAACTCATTCATCACCCTTGCT...CTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACTACCAAAGTGTACTCTCCCAAATTaGGCAGATCCAGCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: ADPAKQQLPLCPISELPKCTLPN*ADPAKQ
Trigger: CTGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACA...CTTTGGTAGTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR GCA 90 bp CCCAGATCCTTAAGATCTCGCCTTTCCAGATGCAAAAGTTCAGCCCCTCTGATGGCCTGGGAATCTGTGTaGAAAGCCTGCAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: PRSLRSRLSRCKSSAPLMAWESV*KACSSC
Trigger: ACAACTGCTGCAGGCTTTGCACACAGATTCCCAGGC...CATCAGAGGGGCTGAACTTTTGCATCTGGAAAGGCGAGATCTTAAGGATCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR GCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCCTAAACCTCCCGAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: NGTERKYILADGLPFPALLNLPK*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTTCGGGAGGTTTAG...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp TTCCAGCCATTACAGTCATTGCAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGGTGGGCCTGAAATTCTaGATTTCTGTAAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: FQPLQSLQSGAGGNFSPQVGLKF*ISVSSQ
Trigger: CTGGGAGCTTACAGAAATGCAGAATTTCAGGCCCAC...CTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGTCGCCCAGGCTGGAGTaGAGTGGCGAGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQSPRLE*SGEILA
Trigger: AGCCAAGATCTCGCCACTGCACTCCAGCCTGGGCGA...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGTCAGCGGGTGGGCTCTaGCCGAGCGGAGCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLSAGGL*PSGARN
Trigger: GTTCCGGGCTCCGCTCGGGCAGAGCCCACCCGCTGA...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337343.9
CDS-3UTR GCA 90 bp AGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAATCCTCTCCGACTCCTaGGGGGACACAGCACCGCCC +
Preference number: 4 (lower is better)
Translates to: SGAYLSMQKTTRTATCFQILSDS*GDTAPP
Trigger: GGGCGGTGCTGTGTCCCCGCAGGAGTCGGAGAGGAT...TTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337343.9
CDS-3UTR GCA 90 bp GCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACTACCAAAGTCTCGCCTTTCCAGATaGAAAAGTTCAGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: ADPAKQQLPLCPISELPKSRLSR*KSSAPL
Trigger: CAGAGGGGCTGAACTTTTGCATCTGGAAAGGCGAGA...CTTTGGTAGTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CCA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCACACGTTACAGAAGGTaGGTCGGGCGTGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: TSLPRNSTNMITPPTVECTRYRR*VGRGSR
Trigger: CCTGCTCCCACGCCCGACCCACCTTCTGTAACGTGT...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CCA 90 bp AATGTTCAACACGGCTATGCCTTGCAAGCTGGGAAGAGGAATATACTGCCCATCGGAGGTTTTCTTTGCTaGCTGCCACAGCTGGACCAG +
Preference number: 4 (lower is better)
Translates to: NVQHGYALQAGKRNILPIGGFLC*LPQLDQ
Trigger: CTGGTCCAGCTGTGGCAGCCAGCAAAGAAAACCTCC...GATGGGCAGTATATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTTGAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTAGCTCCTCTGCAGCCTaGGAGCATAGCTGCATCTGC +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQASSSAA*EHSCIC
Trigger: GCAGATGCAGCTATGCTCCCAGGCTGCAGAGGAGCT...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCCGGGCACCTTGGGTTaGCTTTATTCAGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: LPRNSTNMITPPTVECSFPGTLG*LYSGHG
Trigger: CCCATGCCCTGAATAAAGCCAACCCAAGGTGCCCGG...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTGCAGTCAGGTGCAGGTaGGAACTTCTCACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQAAVRCR*ELLTPA
Trigger: AGCTGGGGTGAGAAGTTCCCACCTGCACCTGACTGC...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261491.9
CDS-3UTR CCA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTAGGCAACCAAGTGCTGTaGGGACTGCTCTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLGNQVL*GLLWEA
Trigger: AGCCTCCCAGAGCAGTCCCCACAGCACTTGGTTGCC...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCGCAGTGGCGAGATCTTaGCTCACTGCAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: LPRNSTNMITPPTVECSFAVARS*LTATST
Trigger: GGTGGAGGTTGCAGTGAGCCAAGATCTCGCCACTGC...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261491.9
3UTR CAA 72 bp AATCCCTGGAGGCTGAACCCACGCTTCACCATCCACTaGCACTGGGACTCCTTCGTCACCAAATATAGTGAT +
Preference number: 4 (lower is better)
Translates to: NPWRLNPRFTIH*HWDSFVTKYSD
Trigger: ATCACTATATTTGGTGACGAAGGAGTCCCAGTGCAAGTGGATGGTGAAGCGTGGGTTCAGCCTCCAGGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp AGCTGCAAAGGAACCCTGCCAACTAGCAAAGATTCTGTTTCATTATACAGCGCCACAGGCCATGGGAGGTaGCTCCAGAAAGACTCTCTC +
Preference number: 4 (lower is better)
Translates to: SCKGTLPTSKDSVSLYSATGHGR*LQKDSL
Trigger: GAGAGAGTCTTTCTGGAGTCACCTCCCATGGCCTGT...GGCGCTGTATAATGAAACAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp GCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACTACCAAAGGGCAACACTCCCAGCTaGCACTGTTTATTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: ADPAKQQLPLCPISELPKGNTPS*HCLFKL
Trigger: CAACTTGAATAAACAGTGTCAGCTGGGAGTGTTGCC...CTTTGGTAGTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR TCA 90 bp GGAACTTCTCACCCCAGCTCATGCATAGATCAAAGCATAGAGGCCCCATCCCACTCTTGGCAGAAGATATaGCCACTGCATGTTCATCAG +
Preference number: 4 (lower is better)
Translates to: GTSHPSSCIDQSIEAPSHSWQKI*PLHVHQ
Trigger: CTGATGAACATGCAGTGGTCATATCTTCTGCCAAGA...GTGGGATGGGGCCTCTATGCTTTGATCTATGCATGAGCTGGGGTGAGAAGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCTTCCGGCTTCCTCAATaGCTTGCCTCACTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: NGTERKYILADGLPFPALFRLPQ*LASLLS
Trigger: AGAAAGCAGTGAGGCAAGTCATTGAGGAAGCCGGAA...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTGCTGGTTCACAGGGGTaGACTGTCGGGTCATCCATA +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQAAGSQG*TVGSSI
Trigger: TATGGATGACCCGACAGTTCACCCCTGTGAACCAGC...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR TCA 90 bp TGTCATTATACTCCACCTGTCCAACATTTTGGTACTGGCTCGTTCCAGTTTCTCCGAACTCCCAGCAATTaGGGCAGCCAGTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CHYTPPVQHFGTGSFQFLRTPSN*GSQSCS
Trigger: AGAGCAGGACTGGCTGCCTCAATTGCTGGGAGTTCG...GAGAAACTGGAACGAGCCAGTACCAAAATGTTGGACAGGTGGAGTATAATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp TCCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATCGAACTCCCAGCAATTaGGGCAGCCAGTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SKLFNSLENSLHMTHFRYRTPSN*GSQSCS
Trigger: AGAGCAGGACTGGCTGCCTCAATTGCTGGGAGTTCG...ATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626247.2
ENST00000627777.2
CDS-3UTR TCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTATAATCCCTGGAGGCTaGACCCACGCTTCACCATCC +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQAIIPGG*THASPS
Trigger: GGATGGTGAAGCGTGGGTTCAGCCTCCAGGGATTAT...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR TCA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTAAGCCTAAGGAGGCTCTaGAGACCCCCTCCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLSLRRL*RPPPGN
Trigger: GTTTCCAGGAGGGGGTCTTCAGAGCCTCCTTAGGCT...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GGAACTTCTCACCCCAGCTCATGCATAGATCAAAGCATAGAGGCCCCATCCCACAAGTGTCCAATCTTTTaGGCCTCCTCCTTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: GTSHPSSCIDQSIEAPSHKCPIF*ASSFCG
Trigger: TCCACAAAAGGAGGAGGCTCAAAAGATTGGACACTT...GTGGGATGGGGCCTCTATGCTTTGATCTATGCATGAGCTGGGGTGAGAAGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGTTCTGGGGTCCCTCTTaGTCCGCTTCGCTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQFWGPS*SASLSD
Trigger: GTCTGACAGCGAAGCGGAGCAAGAGGGACCCCAGAA...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR GCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTGTCTTGGTCCGGATCTaGCCCGAGGTAGACACTTTG +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQAVLVRI*PEVDTL
Trigger: CAAAGTGTCTACCTCGGGGCAGATCCGGACCAAGAC...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000379274.6
CDS-3UTR GCA 90 bp TCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATCCCCAGATCCTTAAGTCTGTGTGCAAAGCCTaGAGCAGTTGTTCGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SLENSLHMTHFRYPQILKSVCKA*SSCSSF
Trigger: GAAGCTCGAACAACTGCTGCAGGCTTTGCACACAGA...CTTAAGGATCTGGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR GCA 90 bp AATGTTCAACACGGCTATGCCTTGCAAGCTGGGAAGAGGAATATACTGCCCATCCCCCAAGCTGCTCTTTaGTTTCACCCAGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: NVQHGYALQAGKRNILPIPQAAL*FHPGTL
Trigger: AAGAGTCCCTGGGTGAAAGCAAAGAGCAGCTTGGGG...GATGGGCAGTATATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTTGAACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR GCA 90 bp AATGGCGTGATGGATGTACAAATGGGTTCGGAGAACTGGTTTACCAGAATCACAGGAATGGCCATAACTTaGCCGGGCATCTGGAGACCG +
Preference number: 4 (lower is better)
Translates to: NGVMDVQMGSENWFTRITGMAIT*PGIWRP
Trigger: CGGTCTCCAGATGCCCGGGCAAGTTATGGCCATTCC...TGTGATTCTGGTAAACCAGTTCTCCGAACCCATTTGTACATCCATCACGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR GCA 90 bp TCTTTGTACTCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGGCTTCACCATCCACTTaGACTGGGACTCCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: SLYSPKLSRSSQAATSSVASPST*TGTPSS
Trigger: TGACGAAGGAGTCCCAGTGCAAGTGGATGGTGAAGC...CACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR GCA 90 bp TCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATCCCCAGATCCTTAAGCCCAAGATTTCAGAGTaGTCTCAAAGGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SLENSLHMTHFRYPQILKPKISE*SQRLCP
Trigger: GGGACAGAGCCTTTGAGAGCACTCTGAAATCTTGGG...CTTAAGGATCTGGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR GCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCGCCTGGGAGCATAGCTaGATCTGCGACACCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LPRNSTNMITPPTVECSFAWEHS*ICDTSS
Trigger: AGAAGAGGTGTCGCAGATGCAGCTATGCTCCCAGGC...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR GCA 90 bp TTCCAGCCATTACAGTCATTGCAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGTTCAGCAGCAGGATGTaGTCCCTGAATTCACTAGTT +
Preference number: 4 (lower is better)
Translates to: FQPLQSLQSGAGGNFSPQFSSRM*SLNSLV
Trigger: AACTAGTGAATTCAGGGAGCACATCCTGCTGCTGAA...CTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp TCTTTGTACTCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGAGATGCAAAACAGAGTaGAGCGGCAGTGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SLYSPKLSRSSQAATSSVRCKTE*SGSAGC
Trigger: ACAGCCTGCACTGCCGCTGCACTCTGTTTTGCATCT...CACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCCCTCGTAGGGTTCTCTaGTCTGTACAGACTTCAGTG +
Preference number: 4 (lower is better)
Translates to: NGTERKYILADGLPFPALPRRVL*SVQTSV
Trigger: CACTGAAGTCTGTACAGACCAGAGAACCCTACGAGG...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CCCAGATCCTTAAGATCTCGCCTTTCCAGATGCAAAAGTTCAGCCCCTCTGATGCCTCGTAGGGTTCTCTaGTCTGTACAGACTTCAGTG +
Preference number: 4 (lower is better)
Translates to: PRSLRSRLSRCKSSAPLMPRRVL*SVQTSV
Trigger: CACTGAAGTCTGTACAGACCAGAGAACCCTACGAGG...CATCAGAGGGGCTGAACTTTTGCATCTGGAAAGGCGAGATCTTAAGGATCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAACACGTTACAGAAGGTaGGTCGGGCGTGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTTRYRR*VGRGSR
Trigger: CCTGCTCCCACGCCCGACCCACCTTCTGTAACGTGT...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACACACGTTACAGAAGGTaGGTCGGGCGTGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDTRYRR*VGRGSR
Trigger: CCTGCTCCCACGCCCGACCCACCTTCTGTAACGTGT...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACACGTTACAGAAGGTaGGTCGGGCGTGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRTRYRR*VGRGSR
Trigger: CCTGCTCCCACGCCCGACCCACCTTCTGTAACGTGT...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CTCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTAGAGGACTGATTAGCTaGTTCACAGGGGTGAACTGT +
Preference number: 4 (lower is better)
Translates to: LSQIEQIQPSSNFLCAPFRGLIS*FTGVNC
Trigger: ACAGTTCACCCCTGTGAACCAGCTAATCAGTCCTCT...AAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CCA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCCGGGCACCTTGGGTTaGCTTTATTCAGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMPGTLG*LYSGHG
Trigger: CCCATGCCCTGAATAAAGCCAACCCAAGGTGCCCGG...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp TCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATCCCCAGATCCTTAAGTACTCGCTCTTCATGTaGCGATTCCAGCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SLENSLHMTHFRYPQILKYSLFM*RFQLQR
Trigger: CCTTTGCAGCTGGAATCGCCACATGAAGAGCGAGTA...CTTAAGGATCTGGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTGGCAACCAAGTGCTGTaGGGACTGCTCTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSGNQVL*GLLWEA
Trigger: AGCCTCCCAGAGCAGTCCCCACAGCACTTGGTTGCC...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 72 bp AATGTTAGAGAGTTCTGGGAACCTGGCACCTCCTGTTaGGTTGCACAGGAAAGTGTTCACAGGAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: NVREFWEPGTSC*VAQESVHRSRT
Trigger: TGTCCTGCTCCTGTGAACACTTTCCTGTGCAACCAAACAGGAGGTGCCAGGTTCCCAGAACTCTCTAACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 72 bp CAGATTATTCTGGTATTGAGCACAGGGAGGTTTTCTTaGCTGGCTGCCACAGCTGGACCAGGGACAGAATCA +
Preference number: 4 (lower is better)
Translates to: QIILVLSTGRFS*LAATAGPGTES
Trigger: TGATTCTGTCCCTGGTCCAGCTGTGGCAGCCAGCAAAGAAAACCTCCCTGTGCTCAATACCAGAATAATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp CAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACCTGTACAGACTTCAGTaGGCTGATCCAATCCTCCAT +
Preference number: 4 (lower is better)
Translates to: QIEQIQPSSNFLCAPFLNLYRLQ*ADPILH
Trigger: ATGGAGGATTGGATCAGCTCACTGAAGTCTGTACAG...GTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR TCA 90 bp GGAACTTCTCACCCCAGCTCATGCATAGATCAAAGCATAGAGGCCCCATCCCACCCAGTTGTGCATCCCTaGGAAATGTTCCACATTAAA +
Preference number: 4 (lower is better)
Translates to: GTSHPSSCIDQSIEAPSHPVVHP*EMFHIK
Trigger: TTTAATGTGGAACATTTCTCAGGGATGCACAACTGG...GTGGGATGGGGCCTCTATGCTTTGATCTATGCATGAGCTGGGGTGAGAAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGACAGGCCATGGGAGGTaGCTCCAGAAAGACTCTCTC +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQTGHGR*LQKDSL
Trigger: GAGAGAGTCTTTCTGGAGTCACCTCCCATGGCCTGT...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTGGTGTCATCGTCATATaGACCTCCCCAGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQAGVIVI*TSPAKN
Trigger: GTTCTTGGCTGGGGAGGTTCATATGACGATGACACC...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR TCA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACGCTGGTTCACAGGGGTaGACTGTCGGGTCATCCATA +
Preference number: 4 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHAGSQG*TVGSSI
Trigger: TATGGATGACCCGACAGTTCACCCCTGTGAACCAGC...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AATCAGTTTGGGAATGGCCATAACTTGCCCGGGCATCTGGAGACCGAGGTGCAGCCATCACACTCAAGTTaGACCCTTTGTTCTAAATTC +
Preference number: 4 (lower is better)
Translates to: NQFGNGHNLPGHLETEVQPSHSS*TLCSKF
Trigger: GAATTTAGAACAAAGGGTTCAACTTGAGTGTGATGG...CTGCACCTCGGTCTCCAGATGCCCGGGCAAGTTATGGCCATTCCCAAACTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp CAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACGCCAAGTCAATGGCGTaGTGGATGTACAAATGGGTT +
Preference number: 4 (lower is better)
Translates to: QIEQIQPSSNFLCAPFLNAKSMA*WMYKWV
Trigger: AACCCATTTGTACATCCATCACGCCATTGACTTGGC...GTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR TCA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCCCCAGATCCAGGCTGTaGACTTGTCTTCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIPRSRL*TCLLLL
Trigger: CAGAAGCAGAAGACAAGTTCACAGCCTGGATCTGGG...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000379274.6
CDS-3UTR TCA 90 bp TCTTTGTACTCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGAGAATTCGCTTCACATaGCCCACTTTCGGTATCCCC +
Preference number: 4 (lower is better)
Translates to: SLYSPKLSRSSQAATSSVRIRFT*PTFGIP
Trigger: GGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCT...CACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR TCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCGATGTCACCTACGAGTaGAAAGCTCACCAAACGAAC +
Preference number: 4 (lower is better)
Translates to: NGTERKYILADGLPFPALDVTYE*KAHQTN
Trigger: GTTCGTTTGGTGAGCTTTTCACTCGTAGGTGACATC...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTAGCCTAAGGAGGCTCTaGAGACCCCCTCCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSSLRRL*RPPPGN
Trigger: GTTTCCAGGAGGGGGTCTTCAGAGCCTCCTTAGGCT...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGGGCTCACTGCAGCCTTaGACTCCTGGTCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMGSLQP*TPGLKQ
Trigger: TTGCTTGAGACCAGGAGTTCAAGGCTGCAGTGAGCC...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTTGGAGGGCAGTAGCATaGTCATGGCTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLWRAVA*SWLTAA
Trigger: GGCTGCAGTGAGCCATGATCATGCTACTGCCCTCCA...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACATTCCGGGGACCTTTTaGAGCCCTCGGACCTCACAT +
Preference number: 4 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHIPGTF*SPRTSH
Trigger: ATGTGAGGTCCGAGGGCTTCAAAAGGTCCCCGGAAT...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCTGTGTAGCTAGACACTaGGAATACAAAGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: NGTERKYILADGLPFPALCVARH*EYKGGE
Trigger: CTCTCCCCCTTTGTATTCTCAGTGTCTAGCTACACA...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTTTCTGGGGTCCCTCTTaGTCCGCTTCGCTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLFWGPS*SASLSD
Trigger: GTCTGACAGCGAAGCGGAGCAAGAGGGACCCCAGAA...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR GCA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCACTTACAGGCAGGTTaGCCTCAAGCCACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMHLQAG*PQATGE
Trigger: CTCACCAGTGGCTTGAGGGCAACCTGCCTGTAAGTG...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGGAATGGCCATAACTTaGCCGGGCATCTGGAGACCG +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTGMAIT*PGIWRP
Trigger: CGGTCTCCAGATGCCCGGGCAAGTTATGGCCATTCC...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGGGAATGGCCATAACTTaGCCGGGCATCTGGAGACCG +
Preference number: 4 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQGMAIT*PGIWRP
Trigger: CGGTCTCCAGATGCCCGGGCAAGTTATGGCCATTCC...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp TCTTTGTACTCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCGACACCTCTTCTGTTaGCAAGTCAATGGCGTGATG +
Preference number: 4 (lower is better)
Translates to: SLYSPKLSRSSQAATSSVRHLFC*QVNGVM
Trigger: CATCACGCCATTGACTTGGCAACAGAAGAGGTGTCG...CACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR GCA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCGCCTGGGAGCATAGCTaGATCTGCGACACCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TSLPRNSTNMITPPTVECAWEHS*ICDTSS
Trigger: AGAAGAGGTGTCGCAGATGCAGCTATGCTCCCAGGC...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR GCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCGCTGCAAAGGAACCCTaGCAACTAGCAAAGATTCTG +
Preference number: 4 (lower is better)
Translates to: NGTERKYILADGLPFPALAAKEP*QLAKIL
Trigger: CAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGC...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTAGAGATCTTGGCTCACTaGAACCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLEILAH*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGTGAGCCAAGATCTC...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCTTGGTTTGCCCAGAGTaGACACATGCTCATGAATGC +
Preference number: 4 (lower is better)
Translates to: NGTERKYILADGLPFPALLVCPE*THAHEC
Trigger: GCATTCATGAGCATGTGTGCACTCTGGGCAAACCAA...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAAAAGGTGGGTCGGGCGTaGGAGCAGGCGTACCAGTTG +
Preference number: 4 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCEKVGRA*EQAYQL
Trigger: CAACTGGTACGCCTGCTCCCACGCCCGACCCACCTT...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACAAGGTGGGTCGGGCGTaGGAGCAGGCGTACCAGTTG +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYKVGRA*EQAYQL
Trigger: CAACTGGTACGCCTGCTCCCACGCCCGACCCACCTT...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp TTTGCTGGCTGCCACAGCTGGACCAGGGACAGAATCAGTTTGGGAATGGCCATACCAACATTTTGGTACTaGCTCGTTCCAGTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: FAGCHSWTRDRISLGMAIPTFWY*LVPVSL
Trigger: TAGAGAAACTGGAACGAGCCAGTACCAAAATGTTGG...TATGGCCATTCCCAAACTGATTCTGTCCCTGGTCCAGCTGTGGCAGCCAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CCA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACAGAACAGGCGCAGCCTaGGAATCTGTGTGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHRTGAA*ESVCKA
Trigger: GGCTTTGCACACAGATTCCCAGGCTGCGCCTGTTCT...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTAAGAACAGGCGCAGCCTaGGAATCTGTGTGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLRTGAA*ESVCKA
Trigger: GGCTTTGCACACAGATTCCCAGGCTGCGCCTGTTCT...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp TCCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATAGAACAGGCGCAGCCTaGGAATCTGTGTGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: SKLFNSLENSLHMTHFRYRTGAA*ESVCKA
Trigger: GGCTTTGCACACAGATTCCCAGGCTGCGCCTGTTCT...ATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CCA 90 bp TCCCAGCAATTGAGGCAGCCAGTCCTGCTCTTAAACCTGGGCAGATTATTCTGGCAACATGATTTCCCTTaGTTTGACGGCTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SQQLRQPVLLLNLGRLFWQHDFP*FDGFLG
Trigger: TCCCAGAAAGCCGTCAAACCAAGGGAAATCATGTTG...CCAGAATAATCTGCCCAGGTTTAAGAGCAGGACTGGCTGCCTCAATTGCTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CCA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGACTTGCCCGGGCATCTaGAGACCGAGGTGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMTCPGI*RPRCSF
Trigger: AAAACTGCACCTCGGTCTCCAGATGCCCGGGCAAGT...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGGGAGGTTTTCTTTGCTaGCTGCCACAGCTGGACCAG +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQGGFLC*LPQLDQ
Trigger: CTGGTCCAGCTGTGGCAGCCAGCAAAGAAAACCTCC...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCGGAGGTTTTCTTTGCTaGCTGCCACAGCTGGACCAG +
Preference number: 4 (lower is better)
Translates to: TSLPRNSTNMITPPTVECGGFLC*LPQLDQ
Trigger: CTGGTCCAGCTGTGGCAGCCAGCAAAGAAAACCTCC...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CCA 90 bp TTCCAGCCATTACAGTCATTGCAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGATGGGTTCGGAGAACTaGTTTACCAGAATCACACTT +
Preference number: 4 (lower is better)
Translates to: FQPLQSLQSGAGGNFSPQMGSEN*FTRITL
Trigger: AAGTGTGATTCTGGTAAACCAGTTCTCCGAACCCAT...CTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACAGCTCCTCTGCAGCCTaGGAGCATAGCTGCATCTGC +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDSSSAA*EHSCIC
Trigger: GCAGATGCAGCTATGCTCCCAGGCTGCAGAGGAGCT...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTAGCTCCTCTGCAGCCTaGGAGCATAGCTGCATCTGC +
Preference number: 4 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLSSSAA*EHSCIC
Trigger: GCAGATGCAGCTATGCTCCCAGGCTGCAGAGGAGCT...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACTACCAAAGTTAAGAGCTTTATTCAGGGCATaGGAGCAGGCATTCACAGCA +
Preference number: 4 (lower is better)
Translates to: PAKQQLPLCPISELPKLRALFRA*EQAFTA
Trigger: TGCTGTGAATGCCTGCTCCCATGCCCTGAATAAAGC...TCTTAACTTTGGTAGTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CCA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTCCGGGCACCTTGGGTTaGCTTTATTCAGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLPGTLG*LYSGHG
Trigger: CCCATGCCCTGAATAAAGCCAACCCAAGGTGCCCGG...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTTACACCTCCGACTGTaGAGTGCTCCTTCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: SPTAKYQATEVLQWCLLILHLRL*SAPSKL
Trigger: GAGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAA...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTTTACACCTCCGACTGTaGAGTGCTCCTTCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQALHLRL*SAPSKL
Trigger: GAGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAA...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CCA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCAGTCAGGTGCAGGTaGGAACTTCTCACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLAVRCR*ELLTPA
Trigger: AGCTGGGGTGAGAAGTTCCCACCTGCACCTGACTGC...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTGCAGTGGCGAGATCTTaGCTCACTGCAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSAVARS*LTATST
Trigger: GGTGGAGGTTGCAGTGAGCCAAGATCTCGCCACTGC...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp TGGTGTAGAACTGCTTCACAATTGTATTGTTTTCGGCTGGGCGCGGTGGCTCACCCATCAGTGAACAGTTaGGTTGCTTCCACTTTTTGG +
Preference number: 4 (lower is better)
Translates to: WCRTASQLYCFRLGAVAHPSVNS*VASTFW
Trigger: CCAAAAAGTGGAAGCAACCCAACTGTTCACTGATGG...GTGAGCCACCGCGCCCAGCCGAAAACAATACAATTGTGAAGCAGTTCTACACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611224.1
3UTR CAA 72 bp AGTCCTGCTCTTAAACCTGGGCAGATTATTCTGGTATaGAGCACAGGGAGGTTTTCTTTGCTGGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: SPALKPGQIILV*STGRFSLLAAT
Trigger: TGTGGCAGCCAGCAAAGAAAACCTCCCTGTGCTCAATACCAGAATAATCTGCCCAGGTTTAAGAGCAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CAA 72 bp AGTTTCTGTAATTCCACCTCCACAGAGTGTAAGGCATaGGATACTCGCTCTTCATGTGGCGATTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SFCNSTSTECKA*DTRSSCGDSSC
Trigger: GCAGCTGGAATCGCCACATGAAGAGCGAGTATCCAATGCCTTACACTCTGTGGAGGTGGAATTACAGAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCCAGACTTCAGTGAGCTaGTCCAATCCTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIQTSVS*SNPPSP
Trigger: AGGAGATGGAGGATTGGATCAGCTCACTGAAGTCTG...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGGGTGTCATCGTCATATaGACCTCCCCAGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMGVIVI*TSPAKN
Trigger: GTTCTTGGCTGGGGAGGTTCATATGACGATGACACC...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp TTCCAGCCATTACAGTCATTGCAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGAAGATGCGTTGCAACTaGGTCTTCATAAATCGTCAT +
Preference number: 4 (lower is better)
Translates to: FQPLQSLQSGAGGNFSPQKMRCN*VFINRH
Trigger: ATGACGATTTATGAAGACTCAGTTGCAACGCATCTT...CTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp TCTCTTGTAAGACTCTCCGGGCACCTTGGGTTGGCTTTATTCAGGGCATGGGAGAAGATGCGTTGCAACTaGGTCTTCATAAATCGTCAT +
Preference number: 4 (lower is better)
Translates to: SLVRLSGHLGLALFRAWEKMRCN*VFINRH
Trigger: ATGACGATTTATGAAGACTCAGTTGCAACGCATCTT...CTCCCATGCCCTGAATAAAGCCAACCCAAGGTGCCCGGAGAGTCTTACAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCTTCCGGCTTCCTCAATaGCTTGCCTCACTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LPRNSTNMITPPTVECSFFRLPQ*LASLLS
Trigger: AGAAAGCAGTGAGGCAAGTCATTGAGGAAGCCGGAA...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR TCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGGCTGGTTCACAGGGGTaGACTGTCGGGTCATCCATA +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRAGSQG*TVGSSI
Trigger: TATGGATGACCCGACAGTTCACCCCTGTGAACCAGC...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp GGAACTTCTCACCCCAGCTCATGCATAGATCAAAGCATAGAGGCCCCATCCCACAGATTATTCTGGTATTaGGCACAGGGAGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GTSHPSSCIDQSIEAPSHRLFWY*AQGGFL
Trigger: AAGAAAACCTCCCTGTGCTCAATACCAGAATAATCT...GTGGGATGGGGCCTCTATGCTTTGATCTATGCATGAGCTGGGGTGAGAAGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACACGAACTCCCAGCAATTaGGGCAGCCAGTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTRTPSN*GSQSCS
Trigger: AGAGCAGGACTGGCTGCCTCAATTGCTGGGAGTTCG...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGCGAACTCCCAGCAATTaGGGCAGCCAGTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVRTPSN*GSQSCS
Trigger: AGAGCAGGACTGGCTGCCTCAATTGCTGGGAGTTCG...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCAATAATCCCTGGAGGCTaGACCCACGCTTCACCATCC +
Preference number: 4 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPIIPGG*THASPS
Trigger: GGATGGTGAAGCGTGGGTTCAGCCTCCAGGGATTAT...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGATAATCCCTGGAGGCTaGACCCACGCTTCACCATCC +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRIIPGG*THASPS
Trigger: GGATGGTGAAGCGTGGGTTCAGCCTCCAGGGATTAT...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp TCTTTGTACTCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGTGCTCCAAAAGACAGTaGATTGTGGCTGCGTCACAT +
Preference number: 4 (lower is better)
Translates to: SLYSPKLSRSSQAATSSVCSKRQ*IVAASH
Trigger: ATGTGACGCAGCCACAATTCACTGTCTTTTGGAGCA...CACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR TCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTACAGCGCCTTCACATTaGTGGCTATTTCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQATAPSH*WLFQWQ
Trigger: CTGCCACTGAAATAGCCATCAATGTGAAGGCGCTGT...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR TCA 90 bp TCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATCCCCAGATCCTTAAGGAAATAGCACCAATATaGTTACACCTCCGACTGTGG +
Preference number: 4 (lower is better)
Translates to: SLENSLHMTHFRYPQILKEIAPI*LHLRLW
Trigger: CCACAGTCGGAGGTGTAATCATATTGGTGCTATTTC...CTTAAGGATCTGGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR TCA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGGGAAACAGGTGTCAGTaGAGTCATTTGGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMGNRCQ*SHLGPA
Trigger: TGCAGGGCCCAAATGACTTCACTGACACCTGTTTCC...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACAAAATACATTCTGGCTaGTGGCCTCCCCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHKIHSG*WPPLPC
Trigger: GCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTT...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACATTCCGGGGACCTTTTaGAGCCCTCGGACCTCACAT +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDIPGTF*SPRTSH
Trigger: ATGTGAGGTCCGAGGGCTTCAAAAGGTCCCCGGAAT...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp TTCCAGCCATTACAGTCATTGCAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGCATCAATCACTGAGATaGGAAAGCACAGATATTTGC +
Preference number: 4 (lower is better)
Translates to: FQPLQSLQSGAGGNFSPQHQSLR*ESTDIC
Trigger: GCAAATATCTGTGCTTTCTCATCTCAGTGATTGATG...CTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCTTGTCTCGAGCTCCTaGCCTCAGGTAATCCACCCA +
Preference number: 4 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQLVSSS*PQVIHP
Trigger: TGGGTGGATTACCTGAGGTCAGGAGCTCGAGACAAG...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GACCTTTCACCTCACAGTGACCTGTCAGAATTTCCCTCCAGTTCAAGGCTGAATAGATTCCCTGACACCTaGAAATGCGACCTTTCACCT +
Preference number: 4 (lower is better)
Translates to: DLSPHSDLSEFPSSSRLNRFPDT*KCDLSP
Trigger: AGGTGAAAGGTCGCATTTTCAGGTGTCAGGGAATCT...ATTCAGCCTTGAACTGGAGGGAAATTCTGACAGGTCACTGTGAGGTGAAAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611224.1
CDS-3UTR TCA 90 bp TCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATCCCCAGATCCTTAAGTCTGTGCCCCATTTCTaGACTACCAAAGTTAAGAGC +
Preference number: 4 (lower is better)
Translates to: SLENSLHMTHFRYPQILKSVPHF*TTKVKS
Trigger: GCTCTTAACTTTGGTAGTTCAGAAATGGGGCACAGA...CTTAAGGATCTGGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR GCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAAGTCTTGGTCCGGATCTaGCCCGAGGTAGACACTTTG +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQEVLVRI*PEVDTL
Trigger: CAAAGTGTCTACCTCGGGGCAGATCCGGACCAAGAC...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR GCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACACACTTACAGGCAGGTTaGCCTCAAGCCACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTHLQAG*PQATGE
Trigger: CTCACCAGTGGCTTGAGGGCAACCTGCCTGTAAGTG...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp TCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATCCCCAGATCCTTAAGAACCATCGGAATCGGTaGTGTTTAGTGCAATTGGAG +
Preference number: 4 (lower is better)
Translates to: SLENSLHMTHFRYPQILKNHRNR*CLVQLE
Trigger: CTCCAATTGCACTAAACAGCACCGATTCCGATGGTT...CTTAAGGATCTGGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR GCA 90 bp TGTCATTATACTCCACCTGTCCAACATTTTGGTACTGGCTCGTTCCAGTTTCTCGCCTGGGAATCTGTGTaGAAAGCCTGCAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: CHYTPPVQHFGTGSFQFLAWESV*KACSSC
Trigger: ACAACTGCTGCAGGCTTTGCACACAGATTCCCAGGC...GAGAAACTGGAACGAGCCAGTACCAAAATGTTGGACAGGTGGAGTATAATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR GCA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTACCCCAAGCTGCTCTTTaGTTTCACCCAGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLPQAAL*FHPGTL
Trigger: AAGAGTCCCTGGGTGAAAGCAAAGAGCAGCTTGGGG...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp TCCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATCCCCAAGCTGCTCTTTaGTTTCACCCAGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: SKLFNSLENSLHMTHFRYPQAAL*FHPGTL
Trigger: AAGAGTCCCTGGGTGAAAGCAAAGAGCAGCTTGGGG...ATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626247.2
ENST00000627777.2
CDS-3UTR GCA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACAACGTCATCCCCAAGCTaGTCTTTGCTTTCACCCAGG +
Preference number: 4 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTTSSPS*SLLSPR
Trigger: CCTGGGTGAAAGCAAAGAGCAGCTTGGGGATGACGT...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp ATCAGTTTGGGAATGGCCATAACTTGCCCGGGCATCTGGAGACCGAGGTGCAGTATTCATCTGTTTCTGTaGTGTCATAATCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: ISLGMAITCPGIWRPRCSIHLFL*CHNQRT
Trigger: AGTCCTCTGATTATGACAGCACAGAAACAGATGAAT...ACTGCACCTCGGTCTCCAGATGCCCGGGCAAGTTATGGCCATTCCCAAACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR GCA 90 bp CTGTCAGTTTCTGTAATTCCACCTCCACAGAGTGTAAGGCATTGGATACTCGCTTGTTCAACACGGCTATaGCTTGCAAGCTGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LSVSVIPPPQSVRHWILACSTRL*LASWEE
Trigger: CTCTTCCCAGCTTGCAAGGCATAGCCGTGTTGAACA...AGCGAGTATCCAATGCCTTACACTCTGTGGAGGTGGAATTACAGAAACTGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR GCA 90 bp TCCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATGCTTCACCATCCACTTaGACTGGGACTCCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: SKLFNSLENSLHMTHFRYASPST*TGTPSS
Trigger: TGACGAAGGAGTCCCAGTGCAAGTGGATGGTGAAGC...ATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626247.2
ENST00000627777.2
CDS-3UTR GCA 90 bp ATCTGTTTCTGTGCTGTCATAATCAGAGGACTGATTAGCTGGTTCACAGGGGTGCCCAAGATTTCAGAGTaGTCTCAAAGGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: ICFCAVIIRGLISWFTGVPKISE*SQRLCP
Trigger: GGGACAGAGCCTTTGAGAGCACTCTGAAATCTTGGG...CACCCCTGTGAACCAGCTAATCAGTCCTCTGATTATGACAGCACAGAAACAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR GCA 90 bp GGAACTTCTCACCCCAGCTCATGCATAGATCAAAGCATAGAGGCCCCATCCCACCCAGAATCACACTTCTaGTTATCTTCCCAAGATTTC +
Preference number: 4 (lower is better)
Translates to: GTSHPSSCIDQSIEAPSHPESHF*LSSQDF
Trigger: GAAATCTTGGGAAGATAAGCAGAAGTGTGATTCTGG...GTGGGATGGGGCCTCTATGCTTTGATCTATGCATGAGCTGGGGTGAGAAGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCCGACACCTCTTCTGTTaGCAAGTCAATGGCGTGATG +
Preference number: 4 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIRHLFC*QVNGVM
Trigger: CATCACGCCATTGACTTGGCAACAGAAGAGGTGTCG...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCGACACCTCTTCTGTTaGCAAGTCAATGGCGTGATG +
Preference number: 4 (lower is better)
Translates to: LPRNSTNMITPPTVECSFRHLFC*QVNGVM
Trigger: CATCACGCCATTGACTTGGCAACAGAAGAGGTGTCG...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR GCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACGCCTGGGAGCATAGCTaGATCTGCGACACCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDAWEHS*ICDTSS
Trigger: AGAAGAGGTGTCGCAGATGCAGCTATGCTCCCAGGC...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp GGAACTTCTCACCCCAGCTCATGCATAGATCAAAGCATAGAGGCCCCATCCCACACAAGAACAGCCACTTaGTTCCAAGGACTTTGTATT +
Preference number: 4 (lower is better)
Translates to: GTSHPSSCIDQSIEAPSHTRTAT*FQGLCI
Trigger: AATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGT...GTGGGATGGGGCCTCTATGCTTTGATCTATGCATGAGCTGGGGTGAGAAGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGCTAAACCTCCCGAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQLNLPK*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTTCGGGAGGTTTAG...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTAAGTGCTGTGGGGACTaGTCTGGGAGGCTATTCTAT +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQAKCCGD*SGRLFY
Trigger: ATAGAATAGCCTCCCAGAGCAGTCCCCACAGCACTT...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261491.9
CDS-3UTR GCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCTTTGGGGCAGTGAGATaGAACAGGAGCTCCAAATTA +
Preference number: 4 (lower is better)
Translates to: NGTERKYILADGLPFPALFGAVR*NRSSKL
Trigger: TAATTTGGAGCTCCTGTTGCATCTCACTGCCCCAAA...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCAGTTTCACTCTTTTCTaGAGCAAACAGAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: NGTERKYILADGLPFPALSFTLF*SKQSPL
Trigger: CAGTGGGCTCTGTTTGCTGCAGAAAAGAGTGAAACT...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTGCGGATCAGTTTCTaGGGTCCCTCTTGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDLRISF*GPSCSA
Trigger: AGCGGAGCAAGAGGGACCCCAGAAACTGATCCGCAA...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CCA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGAAGGTGGGTCGGGCGTaGGAGCAGGCGTACCAGTTG +
Preference number: 4 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLKVGRA*EQAYQL
Trigger: CAACTGGTACGCCTGCTCCCACGCCCGACCCACCTT...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTAGAACAGGCGCAGCCTaGGAATCTGTGTGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSRTGAA*ESVCKA
Trigger: GGCTTTGCACACAGATTCCCAGGCTGCGCCTGTTCT...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCCAACATGATTTCCCTTaGTTTGACGGCTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: NGTERKYILADGLPFPALQHDFP*FDGFLG
Trigger: TCCCAGAAAGCCGTCAAACCAAGGGAAATCATGTTG...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTACTTGCCCGGGCATCTaGAGACCGAGGTGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLTCPGI*RPRCSF
Trigger: AAAACTGCACCTCGGTCTCCAGATGCCCGGGCAAGT...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAAGGAGGTTTTCTTTGCTaGCTGCCACAGCTGGACCAG +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQEGGFLC*LPQLDQ
Trigger: CTGGTCCAGCTGTGGCAGCCAGCAAAGAAAACCTCC...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CTGTCAGTTTCTGTAATTCCACCTCCACAGAGTGTAAGGCATTGGATACTCGCTACCATCCACTTGCACTaGGACTCCTTCGTCACCAAA +
Preference number: 4 (lower is better)
Translates to: LSVSVIPPPQSVRHWILATIHLH*DSFVTK
Trigger: TTTGGTGACGAAGGAGTCCCAGTGCAAGTGGATGGT...AGCGAGTATCCAATGCCTTACACTCTGTGGAGGTGGAATTACAGAAACTGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCACCATCCACTTGCACTaGGACTCCTTCGTCACCAAA +
Preference number: 4 (lower is better)
Translates to: LPRNSTNMITPPTVECSFTIHLH*DSFVTK
Trigger: TTTGGTGACGAAGGAGTCCCAGTGCAAGTGGATGGT...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CCA 90 bp TCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCCTGTTGCCAAGTCAATaGCGTGATGGATGTACAAAT +
Preference number: 4 (lower is better)
Translates to: SPKLSRSSQAATSSVPHFLLPSQ*RDGCTN
Trigger: ATTTGTACATCCATCACGCCATTGACTTGGCAACAG...GAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CCA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCGCTTTATTCAGGGCATaGGAGCAGGCATTCACAGCA +
Preference number: 4 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIALFRA*EQAFTA
Trigger: TGCTGTGAATGCCTGCTCCCATGCCCTGAATAAAGC...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp ATCTGTTTCTGTGCTGTCATAATCAGAGGACTGATTAGCTGGTTCACAGGGGTGGCTTTATTCAGGGCATaGGAGCAGGCATTCACAGCA +
Preference number: 4 (lower is better)
Translates to: ICFCAVIIRGLISWFTGVALFRA*EQAFTA
Trigger: TGCTGTGAATGCCTGCTCCCATGCCCTGAATAAAGC...CACCCCTGTGAACCAGCTAATCAGTCCTCTGATTATGACAGCACAGAAACAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTTACTCGCTCTTCATGTaGCGATTCCAGCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQAYSLFM*RFQLQR
Trigger: CCTTTGCAGCTGGAATCGCCACATGAAGAGCGAGTA...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CCA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGTTACACCTCCGACTGTaGAGTGCTCCTTCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMLHLRL*SAPSKL
Trigger: GAGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAA...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AATGGCGTGATGGATGTACAAATGGGTTCGGAGAACTGGTTTACCAGAATCACACAGACTTCAGTGAGCTaGTCCAATCCTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: NGVMDVQMGSENWFTRITQTSVS*SNPPSP
Trigger: AGGAGATGGAGGATTGGATCAGCTCACTGAAGTCTG...TGTGATTCTGGTAAACCAGTTCTCCGAACCCATTTGTACATCCATCACGCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTCTGTACAGACTTCAGTaGGCTGATCCAATCCTCCAT +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQALYRLQ*ADPILH
Trigger: ATGGAGGATTGGATCAGCTCACTGAAGTCTGTACAG...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR TCA 90 bp CAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACCCAGTTGTGCATCCCTaGGAAATGTTCCACATTAAA +
Preference number: 4 (lower is better)
Translates to: QIEQIQPSSNFLCAPFLNPVVHP*EMFHIK
Trigger: TTTAATGTGGAACATTTCTCAGGGATGCACAACTGG...GTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR TCA 90 bp CTCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTACTGCACATCTTTTGTaGGCCTTGAATTTACACACT +
Preference number: 4 (lower is better)
Translates to: LSQIEQIQPSSNFLCAPFTAHLL*ALNLHT
Trigger: AGTGTGTAAATTCAAGGCTCACAAAAGATGTGCAGT...AAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR TCA 90 bp GCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACTACCAAAGAGGAACTTTACTCCCTaGTTATCTCCACTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: ADPAKQQLPLCPISELPKRNFTP*LSPLLE
Trigger: TTCTAAGAGTGGAGATAATCAGGGAGTAAAGTTCCT...CTTTGGTAGTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR TCA 90 bp GCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACTACCAAAGATTAAATCAAACACCTaGGCCGGATTTAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: ADPAKQQLPLCPISELPKIKSNT*AGFSNC
Trigger: ACAGTTGCTAAATCCGGCTCAGGTGTTTGATTTAAT...CTTTGGTAGTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR TCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGGGTGTCATCGTCATATaGACCTCCCCAGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRGVIVI*TSPAKN
Trigger: GTTCTTGGCTGGGGAGGTTCATATGACGATGACACC...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACGGTGTCATCGTCATATaGACCTCCCCAGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDGVIVI*TSPAKN
Trigger: GTTCTTGGCTGGGGAGGTTCATATGACGATGACACC...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGGTGTCATCGTCATATaGACCTCCCCAGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLGVIVI*TSPAKN
Trigger: GTTCTTGGCTGGGGAGGTTCATATGACGATGACACC...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGTTCCGGCTTCCTCAATaGCTTGCCTCACTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMFRLPQ*LASLLS
Trigger: AGAAAGCAGTGAGGCAAGTCATTGAGGAAGCCGGAA...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTTCCGGCTTCCTCAATaGCTTGCCTCACTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: TSLPRNSTNMITPPTVECFRLPQ*LASLLS
Trigger: AGAAAGCAGTGAGGCAAGTCATTGAGGAAGCCGGAA...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR TCA 90 bp GCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACTACCAAAGAGATTATTCTGGTATTaGGCACAGGGAGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ADPAKQQLPLCPISELPKRLFWY*AQGGFL
Trigger: AAGAAAACCTCCCTGTGCTCAATACCAGAATAATCT...CTTTGGTAGTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR TCA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAACGAACTCCCAGCAATTaGGGCAGCCAGTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCERTPSN*GSQSCS
Trigger: AGAGCAGGACTGGCTGCCTCAATTGCTGGGAGTTCG...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp TCGCTTCACATGACCCACTTTCGGTATCCCCAGATCCTTAAGATCTCGCCTTTCCAGTTTAATGACCCTTaGAACTGCCATTTGCATGCT +
Preference number: 4 (lower is better)
Translates to: SLHMTHFRYPQILKISPFQFNDP*NCHLHA
Trigger: AGCATGCAAATGGCAGTTTCAAGGGTCATTAAACTG...GAAAGGCGAGATCTTAAGGATCTGGGGATACCGAAAGTGGGTCATGTGAAGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR TCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTCACTGGGCTATTCGATaGTGCTGCAGTTTAATGACC +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQAHWAIR*CCSLMT
Trigger: GGTCATTAAACTGCAGCATCATCGAATAGCCCAGTG...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR TCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCACTGGGCTATTCGATaGTGCTGCAGTTTAATGACC +
Preference number: 4 (lower is better)
Translates to: LPRNSTNMITPPTVECSFHWAIR*CCSLMT
Trigger: GGTCATTAAACTGCAGCATCATCGAATAGCCCAGTG...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR TCA 90 bp AGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAATAATCCCTGGAGGCTaGACCCACGCTTCACCATCC +
Preference number: 4 (lower is better)
Translates to: SGAYLSMQKTTRTATCFQIIPGG*THASPS
Trigger: GGATGGTGAAGCGTGGGTTCAGCCTCCAGGGATTAT...TTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp TCCACTTGCACTGGGACTCCTTCGTCACCAAATATAGTGATTTTCACTGTACGGGCCAAGTCAATGGCGTaGTGGATGTACAAATGGGTT +
Preference number: 4 (lower is better)
Translates to: STCTGTPSSPNIVIFTVRAKSMA*WMYKWV
Trigger: AACCCATTTGTACATCCATCACGCCATTGACTTGGC...CCGTACAGTGAAAATCACTATATTTGGTGACGAAGGAGTCCCAGTGCAAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp TCATTATACAGCGCCTTCACATTGATGGCTATTTCAGTGGCAGTGTCTCTTGTACCCAGATCCAGGCTGTaGACTTGTCTTCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SLYSAFTLMAISVAVSLVPRSRL*TCLLLL
Trigger: CAGAAGCAGAAGACAAGTTCACAGCCTGGATCTGGG...TACAAGAGACACTGCCACTGAAATAGCCATCAATGTGAAGGCGCTGTATAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTGACTATCAGAGGGACTaGAAAAGGAGACCTCTGACT +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQADYQRD*KRRPLT
Trigger: AGTCAGAGGTCTCCTTTTTCAGTCCCTCTGATAGTC...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261491.9
CDS-3UTR TCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGCACTCCCCAAAGCTGTaGTCTGATCCCATGGAGAAG +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRHSPKL*SDPMEK
Trigger: CTTCTCCATGGGATCAGATCACAGCTTTGGGGAGTG...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCAAAAATACATTCTGGCTaGTGGCCTCCCCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPKIHSG*WPPLPC
Trigger: GCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTT...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTTGGAGGGCAGTAGCATaGTCATGGCTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLIWRAVA*SWLTAA
Trigger: GGCTGCAGTGAGCCATGATCATGCTACTGCCCTCCA...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCCTGAAATGTCCCCCGTaGTTAAGTTGTGAACAAATG +
Preference number: 4 (lower is better)
Translates to: NGTERKYILADGLPFPALLKCPP*LSCEQM
Trigger: CATTTGTTCACAACTTAATCACGGGGGACATTTCAG...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACAACATTTTTGGGGCAGTaGGATGCAACAGGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTTFLGQ*DATGAP
Trigger: TGGAGCTCCTGTTGCATCTCACTGCCCCAAAAATGT...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACACTTGTCTCGAGCTCCTaGCCTCAGGTAATCCACCCA +
Preference number: 4 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTLVSSS*PQVIHP
Trigger: TGGGTGGATTACCTGAGGTCAGGAGCTCGAGACAAG...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTGCCCCTCTGATGTCATaGCGGATGAAGATATCTTTG +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQAAPLMS*RMKISL
Trigger: CAAAGATATCTTCATCCGTCATGACATCAGAGGGGC...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR GCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAGAAAGACTCTCTCTaGACACGTTACAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: LPRNSTNMITPPTVECSFQKDSL*TRYRRW
Trigger: CCACCTTCTGTAACGTGTGCAGAGAGAGTCTTTCTG...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR GCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCGTAGACGGAGAACACTaGCACATGTTTTGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: LPRNSTNMITPPTVECSFVDGEH*HMFCRR
Trigger: TCTGCGACAAAACATGTGGCAGTGTTCTCCGTCTAC...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000627777.2
CDS-3UTR GCA 90 bp CTCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTACAGAACGAAAATGTTaGTCTACAGAAACCATCGGA +
Preference number: 4 (lower is better)
Translates to: LSQIEQIQPSSNFLCAPFTERKC*STETIG
Trigger: TCCGATGGTTTCTGTAGAGCAACATTTTCGTTCTGT...AAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR GCA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACATCTGTGTGCAAAGCCTaGAGCAGTTGTTCGAGCTTC +
Preference number: 4 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTSVCKA*SSCSSF
Trigger: GAAGCTCGAACAACTGCTGCAGGCTTTGCACACAGA...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp TCCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATTCTGTGTGCAAAGCCTaGAGCAGTTGTTCGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SKLFNSLENSLHMTHFRYSVCKA*SSCSSF
Trigger: GAAGCTCGAACAACTGCTGCAGGCTTTGCACACAGA...ATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626247.2
ENST00000627777.2
CDS-3UTR GCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAAGCCTGGGAATCTGTGTaGAAAGCCTGCAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQEAWESV*KACSSC
Trigger: ACAACTGCTGCAGGCTTTGCACACAGATTCCCAGGC...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCTGGGAATCTGTGTaGAAAGCCTGCAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTAWESV*KACSSC
Trigger: ACAACTGCTGCAGGCTTTGCACACAGATTCCCAGGC...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTCCCCAAGCTGCTCTTTaGTTTCACCCAGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSPQAAL*FHPGTL
Trigger: AAGAGTCCCTGGGTGAAAGCAAAGAGCAGCTTGGGG...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACCCCCAAGCTGCTCTTTaGTTTCACCCAGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDPQAAL*FHPGTL
Trigger: AAGAGTCCCTGGGTGAAAGCAAAGAGCAGCTTGGGG...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAACGTCATCCCCAAGCTaGTCTTTGCTTTCACCCAGG +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTTSSPS*SLLSPR
Trigger: CCTGGGTGAAAGCAAAGAGCAGCTTGGGGATGACGT...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCAACGTCATCCCCAAGCTaGTCTTTGCTTTCACCCAGG +
Preference number: 4 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPTSSPS*SLLSPR
Trigger: CCTGGGTGAAAGCAAAGAGCAGCTTGGGGATGACGT...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp ATGAAGATATCTTTGTACTCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTACGTCATCCCCAAGCTaGTCTTTGCTTTCACCCAGG +
Preference number: 4 (lower is better)
Translates to: MKISLYSPKLSRSSQAATTSSPS*SLLSPR
Trigger: CCTGGGTGAAAGCAAAGAGCAGCTTGGGGATGACGT...AGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACAAAGATATCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR GCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAAGGAATGGCCATAACTTaGCCGGGCATCTGGAGACCG +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKGMAIT*PGIWRP
Trigger: CGGTCTCCAGATGCCCGGGCAAGTTATGGCCATTCC...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAAGGAATGGCCATAACTTaGCCGGGCATCTGGAGACCG +
Preference number: 4 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCEGMAIT*PGIWRP
Trigger: CGGTCTCCAGATGCCCGGGCAAGTTATGGCCATTCC...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp TCCACTTGCACTGGGACTCCTTCGTCACCAAATATAGTGATTTTCACTGTACGGAACACGGCTATGCCTTaGAAGCTGGGAAGAGGAATA +
Preference number: 4 (lower is better)
Translates to: STCTGTPSSPNIVIFTVRNTAMP*KLGRGI
Trigger: TATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTT...CCGTACAGTGAAAATCACTATATTTGGTGACGAAGGAGTCCCAGTGCAAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR GCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCAACACGGCTATGCCTTaGAAGCTGGGAAGAGGAATA +
Preference number: 4 (lower is better)
Translates to: LPRNSTNMITPPTVECSFNTAMP*KLGRGI
Trigger: TATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTT...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR GCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGGCTTCACCATCCACTTaGACTGGGACTCCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRASPST*TGTPSS
Trigger: TGACGAAGGAGTCCCAGTGCAAGTGGATGGTGAAGC...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGCGACACCTCTTCTGTTaGCAAGTCAATGGCGTGATG +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQRHLFC*QVNGVM
Trigger: CATCACGCCATTGACTTGGCAACAGAAGAGGTGTCG...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp TCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCACAGTGAATTGTGGCTaGGTCACATATCCTAGTAAT +
Preference number: 4 (lower is better)
Translates to: SPKLSRSSQAATSSVPHFTVNCG*VTYPSN
Trigger: ATTACTAGGATATGTGACGCAGCCACAATTCACTGT...GAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR GCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCCCACTGTTTAGACAATaGAATCGTCTCAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: NGTERKYILADGLPFPALPLFRQ*NRLRFL
Trigger: GAGGAATCTGAGACGATTGCATTGTCTAAACAGTGG...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCCACCTCCTGTTTGGTTaGACAGGAAAGTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIHLLFG*TGKCSQ
Trigger: CTGTGAACACTTTCCTGTGCAACCAAACAGGAGGTG...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACGGCCCTGCACAGCCATaGATAGACAAAGCATACAGA +
Preference number: 4 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHGPAQP*IDKAYR
Trigger: TCTGTATGCTTTGTCTATGCATGGCTGTGCAGGGCC...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACTAGCTGTGTTGGTCTaGCAATCTCCTGTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQELAVLV*QSPVSH
Trigger: GTGGGACACAGGAGATTGGCAGACCAACACAGCTAG...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACCTAGCTGTGTTGGTCTaGCAATCTCCTGTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDLAVLV*QSPVSH
Trigger: GTGGGACACAGGAGATTGGCAGACCAACACAGCTAG...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCTCAATGTGTGTGTACTaGTATGTGTCCTCATGCATG +
Preference number: 4 (lower is better)
Translates to: NGTERKYILADGLPFPALSMCVY*YVSSCM
Trigger: CATGCATGAGGACACATAGCAGTACACACACATTGA...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCGACACAATGAGCCAATaGCAAAGTCAGTTACAGAAC +
Preference number: 4 (lower is better)
Translates to: NGTERKYILADGLPFPALDTMSQ*QSQLQN
Trigger: GTTCTGTAACTGACTTTGGCATTGGCTCATTGTGTC...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACATCTCGCCTTTCCAGATaGAAAAGTTCAGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTSRLSR*KSSAPL
Trigger: CAGAGGGGCTGAACTTTTGCATCTGGAAAGGCGAGA...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337343.9
CDS-3UTR GCA 90 bp CTGCTACGAACATGGTGTAGAACTGCTTCACAATTGTATTGTTTTCGGCTGGGCAGGTTCAACCTTAGCTaGGAATGTGCACATTGGGCA +
Preference number: 4 (lower is better)
Translates to: LLRTWCRTASQLYCFRLGRFNLS*ECAHWA
Trigger: TGCCCAATGTGCACATTCGCAGCTAAGGTTGAACCT...GCCCAGCCGAAAACAATACAATTGTGAAGCAGTTCTACACCATGTTCGTAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611224.1
CDS-3UTR CCA 90 bp AACCTTTTCCTTTTTAAACTTTGGCACTATTCGAAATACGGTGCTTCTGTTGTTAAGGTGGGTCGGGCGTaGGAGCAGGCGTACCAGTTG +
Preference number: 4 (lower is better)
Translates to: NLFLFKLWHYSKYGASVVKVGRA*EQAYQL
Trigger: CAACTGGTACGCCTGCTCCCACGCCCGACCCACCTT...AACAACAGAAGCACCGTATTTCGAATAGTGCCAAAGTTTAAAAAGGAAAAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAGAACAGGCGCAGCCTaGGAATCTGTGTGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVRTGAA*ESVCKA
Trigger: GGCTTTGCACACAGATTCCCAGGCTGCGCCTGTTCT...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CCTGGAAGTAGGGAAGCTTTTGGTGGCAATTTGAGTTCATATGTCATTATACTCAGAACAGGCGCAGCCTaGGAATCTGTGTGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: PGSREAFGGNLSSYVIILRTGAA*ESVCKA
Trigger: GGCTTTGCACACAGATTCCCAGGCTGCGCCTGTTCT...GAGTATAATGACATATGAACTCAAATTGCCACCAAAAGCTTCCCTACTTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCGGTTTGACGGCTTTCTaGGAGGAAGGTTTTGTAACG +
Preference number: 4 (lower is better)
Translates to: LPRNSTNMITPPTVECSFGLTAF*EEGFVT
Trigger: CGTTACAAAACCTTCCTCCCAGAAAGCCGTCAAACC...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CCA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCAGAGGACTGATTAGCTaGTTCACAGGGGTGAACTGT +
Preference number: 4 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIRGLIS*FTGVNC
Trigger: ACAGTTCACCCCTGTGAACCAGCTAATCAGTCCTCT...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACAGGAGGTTTTCTTTGCTaGCTGCCACAGCTGGACCAG +
Preference number: 4 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTGGFLC*LPQLDQ
Trigger: CTGGTCCAGCTGTGGCAGCCAGCAAAGAAAACCTCC...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTGGAGGTTTTCTTTGCTaGCTGCCACAGCTGGACCAG +
Preference number: 4 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLGGFLC*LPQLDQ
Trigger: CTGGTCCAGCTGTGGCAGCCAGCAAAGAAAACCTCC...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CCCAGATCCTTAAGATCTCGCCTTTCCAGATGCAAAAGTTCAGCCCCTCTGATGATGGGTTCGGAGAACTaGTTTACCAGAATCACACTT +
Preference number: 4 (lower is better)
Translates to: PRSLRSRLSRCKSSAPLMMGSEN*FTRITL
Trigger: AAGTGTGATTCTGGTAAACCAGTTCTCCGAACCCAT...CATCAGAGGGGCTGAACTTTTGCATCTGGAAAGGCGAGATCTTAAGGATCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CCA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATAGCTCCTCTGCAGCCTaGGAGCATAGCTGCATCTGC +
Preference number: 4 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYSSSAA*EHSCIC
Trigger: GCAGATGCAGCTATGCTCCCAGGCTGCAGAGGAGCT...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAAAGCTCCTCTGCAGCCTaGGAGCATAGCTGCATCTGC +
Preference number: 4 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCESSSAA*EHSCIC
Trigger: GCAGATGCAGCTATGCTCCCAGGCTGCAGAGGAGCT...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTACTCGCTCTTCATGTaGCGATTCCAGCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: TSLPRNSTNMITPPTVECYSLFM*RFQLQR
Trigger: CCTTTGCAGCTGGAATCGCCACATGAAGAGCGAGTA...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CCA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCATTACACCTCCGACTGTaGAGTGCTCCTTCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPLHLRL*SAPSKL
Trigger: GAGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAA...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGGCTAGTAGAGTGCAGTaGTGTGATCTCAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQASRVQ*CDLSHC
Trigger: GCAGTGACTGAGATCACACCACTGCACTCTACTAGC...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCTGGCACCTCCTGTTTaGTTGCACAGGAAAGTGTTC +
Preference number: 4 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMLAPPV*LHRKVF
Trigger: GAACACTTTCCTGTGCAACCAAACAGGAGGTGCCAG...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACCTGGCACCTCCTGTTTaGTTGCACAGGAAAGTGTTC +
Preference number: 4 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHLAPPV*LHRKVF
Trigger: GAACACTTTCCTGTGCAACCAAACAGGAGGTGCCAG...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGAGAGTTCTGGGAACCTaGCACCTCCTGTTTGGTTGC +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRRVLGT*HLLFGC
Trigger: GCAACCAAACAGGAGGTGCCAGGTTCCCAGAACTCT...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp TTCCAGCCATTACAGTCATTGCAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGAGATCTAGACATTCATaGGTCATTTCTTGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: FQPLQSLQSGAGGNFSPQRSRHS*VISCQQ
Trigger: TTGCTGACAAGAAATGACCCATGAATGTCTAGATCT...CTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAAAGCCTTCAGAATAGCTaGGACTACAGGCGCATGCCA +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQESLQNS*DYRRMP
Trigger: TGGCATGCGCCTGTAGTCCCAGCTATTCTGAAGGCT...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp GGAACTTCTCACCCCAGCTCATGCATAGATCAAAGCATAGAGGCCCCATCCCACATTTTTGTATTAAGTTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: GTSHPSSCIDQSIEAPSHIFVLS*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGCCAACTTAATACAAAAAT...GTGGGATGGGGCCTCTATGCTTTGATCTATGCATGAGCTGGGGTGAGAAGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp TTCCAGCCATTACAGTCATTGCAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGTCTAACCTCACTGTCTaGGAAGTCTATCTTTATATC +
Preference number: 4 (lower is better)
Translates to: FQPLQSLQSGAGGNFSPQSNLTV*EVYLYI
Trigger: GATATAAAGATAGACTTCCCAGACAGTGAGGTTAGA...CTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 72 bp GCCACGGCATCAGCTACAACGGCATTTTCCAAGGTTTaGTCATACGTCTTTTCTACTTTGGCAACGAAGTCC +
Preference number: 4 (lower is better)
Translates to: ATASATTAFSKV*SYVFSTLATKS
Trigger: GGACTTCGTTGCCAAAGTAGAAAAGACGTATGACAAAACCTTGGAAAATGCCGTTGTAGCTGATGCCGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACCAGACTTCAGTGAGCTaGTCCAATCCTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDQTSVS*SNPPSP
Trigger: AGGAGATGGAGGATTGGATCAGCTCACTGAAGTCTG...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATACAGGCCATGGGAGGTaGCTCCAGAAAGACTCTCTC +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYTGHGR*LQKDSL
Trigger: GAGAGAGTCTTTCTGGAGTCACCTCCCATGGCCTGT...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACACAGGCCATGGGAGGTaGCTCCAGAAAGACTCTCTC +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYTGHGR*LQKDSL
Trigger: GAGAGAGTCTTTCTGGAGTCACCTCCCATGGCCTGT...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTAAGTTTCTCTAGGATCTaGGGAAGTTGGGTGTCATCG +
Preference number: 4 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLSFSRI*GSWVSS
Trigger: CGATGACACCCAACTTCCTCAGATCCTAGAGAAACT...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGAGTTTCTCTAGGATCTaGGGAAGTTGGGTGTCATCG +
Preference number: 4 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMSFSRI*GSWVSS
Trigger: CGATGACACCCAACTTCCTCAGATCCTAGAGAAACT...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp TCCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATAGTTTCTCTAGGATCTaGGGAAGTTGGGTGTCATCG +
Preference number: 4 (lower is better)
Translates to: SKLFNSLENSLHMTHFRYSFSRI*GSWVSS
Trigger: CGATGACACCCAACTTCCTCAGATCCTAGAGAAACT...ATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626247.2
ENST00000627777.2
CDS-3UTR TCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCTCTTGGCAGAAGATATaGCCACTGCATGTTCATCAG +
Preference number: 4 (lower is better)
Translates to: LPRNSTNMITPPTVECSFSWQKI*PLHVHQ
Trigger: CTGATGAACATGCAGTGGTCATATCTTCTGCCAAGA...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR TCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATGCTGGTTCACAGGGGTaGACTGTCGGGTCATCCATA +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYAGSQG*TVGSSI
Trigger: TATGGATGACCCGACAGTTCACCCCTGTGAACCAGC...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACCACTGGGCTATTCGATaGTGCTGCAGTTTAATGACC +
Preference number: 4 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHHWAIR*CCSLMT
Trigger: GGTCATTAAACTGCAGCATCATCGAATAGCCCAGTG...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATATAATCCCTGGAGGCTaGACCCACGCTTCACCATCC +
Preference number: 4 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYIIPGG*THASPS
Trigger: GGATGGTGAAGCGTGGGTTCAGCCTCCAGGGATTAT...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACGCCAAGTCAATGGCGTaGTGGATGTACAAATGGGTT +
Preference number: 4 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHAKSMA*WMYKWV
Trigger: AACCCATTTGTACATCCATCACGCCATTGACTTGGC...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCAACAGCGCCTTCACATTaGTGGCTATTTCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPTAPSH*WLFQWQ
Trigger: CTGCCACTGAAATAGCCATCAATGTGAAGGCGCTGT...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAAAGAATTCGCTTCACATaGCCCACTTTCGGTATCCCC +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQERIRFT*PTFGIP
Trigger: GGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCT...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAAGAATTCGCTTCACATaGCCCACTTTCGGTATCCCC +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTRIRFT*PTFGIP
Trigger: GGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCT...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCGAAATAGCACCAATATaGTTACACCTCCGACTGTGG +
Preference number: 4 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIEIAPI*LHLRLW
Trigger: CCACAGTCGGAGGTGTAATCATATTGGTGCTATTTC...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp CTGTCAGTTTCTGTAATTCCACCTCCACAGAGTGTAAGGCATTGGATACTCGCTGAAATAGCACCAATATaGTTACACCTCCGACTGTGG +
Preference number: 4 (lower is better)
Translates to: LSVSVIPPPQSVRHWILAEIAPI*LHLRLW
Trigger: CCACAGTCGGAGGTGTAATCATATTGGTGCTATTTC...AGCGAGTATCCAATGCCTTACACTCTGTGGAGGTGGAATTACAGAAACTGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAAACTCCTGACCTCCGGTaGTCTACCCACCTAAACCTC +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKTPDLR*STHLNL
Trigger: GAGGTTTAGGTGGGTAGATCACCGGAGGTCAGGAGT...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATACTCCTGACCTCCGGTaGTCTACCCACCTAAACCTC +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYTPDLR*STHLNL
Trigger: GAGGTTTAGGTGGGTAGATCACCGGAGGTCAGGAGT...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGGGAAACAGGTGTCAGTaGAGTCATTTGGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVGNRCQ*SHLGPA
Trigger: TGCAGGGCCCAAATGACTTCACTGACACCTGTTTCC...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCCAAAGCTGTGATCTaGTCCCATGGAGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQPKAVI*SHGEAL
Trigger: AAGAGCTTCTCCATGGGATCAGATCACAGCTTTGGG...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTGAGAGATGTAGGATaGGTTAATTGGAGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPLRDVG*VNWSGA
Trigger: CGCCCCACTCCAATTAACTCATCCTACATCTCTCAG...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTACCAGCTAAGTGTGTCTaGCTAGTTCTCCAGACATCA +
Preference number: 4 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLPAKCV*LVLQTS
Trigger: TGATGTCTGGAGAACTAGTCAGACACACTTAGCTGG...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCAGAGAACGCAGTCAGTaGTCCATGCTCTGGATTAAA +
Preference number: 4 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIRERSQ*SMLWIK
Trigger: TTTAATCCAGAGCATGGATCACTGACTGCGTTCTCT...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCTTCAAATGGAGCCTCTaGAGTATACCAGAAAGCATT +
Preference number: 4 (lower is better)
Translates to: NGTERKYILADGLPFPALFKWSL*SIPESI
Trigger: AATGCTTTCTGGTATACTTCAGAGGCTCCATTTGAA...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACAGCCCCTCTGATGTCATaGCGGATGAAGATATCTTTG +
Preference number: 4 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTAPLMS*RMKISL
Trigger: CAAAGATATCTTCATCCGTCATGACATCAGAGGGGC...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337343.9
CDS-3UTR GCA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGTTCTGGGGTCCCTCTTaGTCCGCTTCGCTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLFWGPS*SASLSD
Trigger: GTCTGACAGCGAAGCGGAGCAAGAGGGACCCCAGAA...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp TCCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATCAGAAAGACTCTCTCTaGACACGTTACAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SKLFNSLENSLHMTHFRYQKDSL*TRYRRW
Trigger: CCACCTTCTGTAACGTGTGCAGAGAGAGTCTTTCTG...ATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626247.2
ENST00000627777.2
CDS-3UTR GCA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAACACTTACAGGCAGGTTaGCCTCAAGCCACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCEHLQAG*PQATGE
Trigger: CTCACCAGTGGCTTGAGGGCAACCTGCCTGTAAGTG...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGGTAGACGGAGAACACTaGCACATGTTTTGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQVDGEH*HMFCRR
Trigger: TCTGCGACAAAACATGTGGCAGTGTTCTCCGTCTAC...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp TCCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATGTAGACGGAGAACACTaGCACATGTTTTGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: SKLFNSLENSLHMTHFRYVDGEH*HMFCRR
Trigger: TCTGCGACAAAACATGTGGCAGTGTTCTCCGTCTAC...ATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR GCA 90 bp TCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATCCCCAGATCCTTAAGATAAAATTCTTCAGATaGTTCTGGAGGTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SLENSLHMTHFRYPQILKIKFFR*FWRSWK
Trigger: CTTCCAGGACCTCCAGAAGCATCTGAAGAATTTTAT...CTTAAGGATCTGGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR GCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGGCCTGGGAATCTGTGTaGAAAGCCTGCAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVAWESV*KACSSC
Trigger: ACAACTGCTGCAGGCTTTGCACACAGATTCCCAGGC...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACAACGTCATCCCCAAGCTaGTCTTTGCTTTCACCCAGG +
Preference number: 4 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTTSSPS*SLLSPR
Trigger: CCTGGGTGAAAGCAAAGAGCAGCTTGGGGATGACGT...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CTTTGTTCTAAATTCTTGTACGATCTCTGTAATAACTCCCGGGTTCCAAGGACTACGTCATCCCCAAGCTaGTCTTTGCTTTCACCCAGG +
Preference number: 4 (lower is better)
Translates to: LCSKFLYDLCNNSRVPRTTSSPS*SLLSPR
Trigger: CCTGGGTGAAAGCAAAGAGCAGCTTGGGGATGACGT...AGTCCTTGGAACCCGGGAGTTATTACAGAGATCGTACAAGAATTTAGAACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR GCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAACACGGCTATGCCTTaGAAGCTGGGAAGAGGAATA +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQNTAMP*KLGRGI
Trigger: TATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTT...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp ATGAAGATATCTTTGTACTCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTTGTTCAACACGGCTATaGCTTGCAAGCTGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: MKISLYSPKLSRSSQAATCSTRL*LASWEE
Trigger: CTCTTCCCAGCTTGCAAGGCATAGCCGTGTTGAACA...AGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACAAAGATATCTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR GCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGGCTTCACCATCCACTTaGACTGGGACTCCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVASPST*TGTPSS
Trigger: TGACGAAGGAGTCCCAGTGCAAGTGGATGGTGAAGC...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACAGAGCATAGCTGCATCTaGGACACCTCTTCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTEHSCI*DTSSVA
Trigger: GGCAACAGAAGAGGTGTCGCAGATGCAGCTATGCTC...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAAGCCTGGGAGCATAGCTaGATCTGCGACACCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKAWEHS*ICDTSS
Trigger: AGAAGAGGTGTCGCAGATGCAGCTATGCTCCCAGGC...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACGCCTGGGAGCATAGCTaGATCTGCGACACCTCTTCT +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYAWEHS*ICDTSS
Trigger: AGAAGAGGTGTCGCAGATGCAGCTATGCTCCCAGGC...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCGCTGCAAAGGAACCCTaGCAACTAGCAAAGATTCTG +
Preference number: 4 (lower is better)
Translates to: TSLPRNSTNMITPPTVECAAKEP*QLAKIL
Trigger: CAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGC...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR GCA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGGCCCTGCACAGCCATaGATAGACAAAGCATACAGA +
Preference number: 4 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLGPAQP*IDKAYR
Trigger: TCTGTATGCTTTGTCTATGCATGGCTGTGCAGGGCC...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGTCATTGCAGTCAGGTaGAGGTGGGAACTTCTCACC +
Preference number: 4 (lower is better)
Translates to: SGAYLSMQKTTRTATCFQVIAVR*RWELLT
Trigger: GGTGAGAAGTTCCCACCTGCACCTGACTGCAATGAC...TTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGAGCCATTACAGTCATTaGAGTCAGGTGCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRSHYSH*SQVQVG
Trigger: TCCCACCTGCACCTGACTGCAATGACTGTAATGGCT...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGAGGGTCTCACTATGTTaGCGAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQRVSLC*RGWSQT
Trigger: AGTTTGAGACCAGCCTCGGCAACATAGTGAGACCCT...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATGAGATCTTGGCTCACTaGAACCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYEILAH*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGTGAGCCAAGATCTC...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCAAAATCTCCTTGGTCTaGAGGGTATGGTCTGATCCA +
Preference number: 4 (lower is better)
Translates to: LPRNSTNMITPPTVECSFKISLV*RVWSDP
Trigger: TGGATCAGACCATACCCTGCAGACCAAGGAGATTTT...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261491.9
CDS-3UTR CCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACCTCGTAGGGTTCTCTaGTCTGTACAGACTTCAGTG +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQEPRRVL*SVQTSV
Trigger: CACTGAAGTCTGTACAGACCAGAGAACCCTACGAGG...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp GCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACTACCAAAGAGTGGACATATTGGATaGTATAAATCTTTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: ADPAKQQLPLCPISELPKSGHIG*YKSLQA
Trigger: TGCCTGCAAAGATTTATACCATCCAATATGTCCACT...CTTTGGTAGTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CCA 90 bp ATCTGTTTCTGTGCTGTCATAATCAGAGGACTGATTAGCTGGTTCACAGGGGTGACCTGTCCAACATTTTaGTACTGGCTCGTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: ICFCAVIIRGLISWFTGVTCPTF*YWLVPV
Trigger: AACTGGAACGAGCCAGTACCAAAATGTTGGACAGGT...CACCCCTGTGAACCAGCTAATCAGTCCTCTGATTATGACAGCACAGAAACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTACCTGTCCAACATTTTaGTACTGGCTCGTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQATCPTF*YWLVPV
Trigger: AACTGGAACGAGCCAGTACCAAAATGTTGGACAGGT...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CCA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGGGTTTGACGGCTTTCTaGGAGGAAGGTTTTGTAACG +
Preference number: 4 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMGLTAF*EEGFVT
Trigger: CGTTACAAAACCTTCCTCCCAGAAAGCCGTCAAACC...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGGGTTTGACGGCTTTCTaGGAGGAAGGTTTTGTAACG +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQGLTAF*EEGFVT
Trigger: CGTTACAAAACCTTCCTCCCAGAAAGCCGTCAAACC...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp AATGGCGTGATGGATGTACAAATGGGTTCGGAGAACTGGTTTACCAGAATCACAGGTTTGACGGCTTTCTaGGAGGAAGGTTTTGTAACG +
Preference number: 4 (lower is better)
Translates to: NGVMDVQMGSENWFTRITGLTAF*EEGFVT
Trigger: CGTTACAAAACCTTCCTCCCAGAAAGCCGTCAAACC...TGTGATTCTGGTAAACCAGTTCTCCGAACCCATTTGTACATCCATCACGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTCAACATGATTTCCCTTaGTTTGACGGCTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQAQHDFP*FDGFLG
Trigger: TCCCAGAAAGCCGTCAAACCAAGGGAAATCATGTTG...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAGAGGACTGATTAGCTaGTTCACAGGGGTGAACTGT +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQRGLIS*FTGVNC
Trigger: ACAGTTCACCCCTGTGAACCAGCTAATCAGTCCTCT...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACTTGCCCGGGCATCTaGAGACCGAGGTGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLITCPGI*RPRCSF
Trigger: AAAACTGCACCTCGGTCTCCAGATGCCCGGGCAAGT...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACCTATGCCTTGCAAGCTaGGAAGAGGAATATACTGCC +
Preference number: 4 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHLCLAS*EEEYTA
Trigger: GGCAGTATATTCCTCTTCCCAGCTTGCAAGGCATAG...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp TCCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATCTATGCCTTGCAAGCTaGGAAGAGGAATATACTGCC +
Preference number: 4 (lower is better)
Translates to: SKLFNSLENSLHMTHFRYLCLAS*EEEYTA
Trigger: GGCAGTATATTCCTCTTCCCAGCTTGCAAGGCATAG...ATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CCA 90 bp TCCCAGCAATTGAGGCAGCCAGTCCTGCTCTTAAACCTGGGCAGATTATTCTGGCTTGTCATCAAAGGATaGTGCAGCAAATATATCATC +
Preference number: 4 (lower is better)
Translates to: SQQLRQPVLLLNLGRLFWLVIKG*CSKYII
Trigger: GATGATATATTTGCTGCACCATCCTTTGATGACAAG...CCAGAATAATCTGCCCAGGTTTAAGAGCAGGACTGGCTGCCTCAATTGCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTACCATCCACTTGCACTaGGACTCCTTCGTCACCAAA +
Preference number: 4 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSTIHLH*DSFVTK
Trigger: TTTGGTGACGAAGGAGTCCCAGTGCAAGTGGATGGT...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAACCATCCACTTGCACTaGGACTCCTTCGTCACCAAA +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTTIHLH*DSFVTK
Trigger: TTTGGTGACGAAGGAGTCCCAGTGCAAGTGGATGGT...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCAATTTTGATAATCCCTaGAGGCTGAACCCACGCTTC +
Preference number: 4 (lower is better)
Translates to: SPTAKYQATEVLQWCLLINFDNP*RLNPRF
Trigger: GAAGCGTGGGTTCAGCCTCCAGGGATTATCAAAATT...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp AGCTGCAAAGGAACCCTGCCAACTAGCAAAGATTCTGTTTCATTATACAGCGCCAATTTTGATAATCCCTaGAGGCTGAACCCACGCTTC +
Preference number: 4 (lower is better)
Translates to: SCKGTLPTSKDSVSLYSANFDNP*RLNPRF
Trigger: GAAGCGTGGGTTCAGCCTCCAGGGATTATCAAAATT...GGCGCTGTATAATGAAACAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTAATTTTGATAATCCCTaGAGGCTGAACCCACGCTTC +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQANFDNP*RLNPRF
Trigger: GAAGCGTGGGTTCAGCCTCCAGGGATTATCAAAATT...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAATACTCGCTCTTCATGTaGCGATTCCAGCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQEYSLFM*RFQLQR
Trigger: CCTTTGCAGCTGGAATCGCCACATGAAGAGCGAGTA...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCAATGTTAGAGAGTTCTaGGAACCTGGCACCTCCTGT +
Preference number: 4 (lower is better)
Translates to: TSLPRNSTNMITPPTVECNVREF*EPGTSC
Trigger: ACAGGAGGTGCCAGGTTCCCAGAACTCTCTAACATT...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261491.9
CDS-3UTR CCA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACACTGAAGACCCCCTCCTaGAAACAGGTGTCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTLKTPS*KQVSVK
Trigger: CTTCACTGACACCTGTTTCCAGGAGGGGGTCTTCAG...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACGAGGAGAGAAACCCATaGCAACCAAGTGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYEERNP*QPSAVG
Trigger: CCCCACAGCACTTGGTTGCCATGGGTTTCTCTCCTC...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAAGAGGAGAGAAACCCATaGCAACCAAGTGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKEERNP*QPSAVG
Trigger: CCCCACAGCACTTGGTTGCCATGGGTTTCTCTCCTC...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCAGATCTATCAGTCACTaGGATCACATGTACGGCTGT +
Preference number: 4 (lower is better)
Translates to: LPRNSTNMITPPTVECSFRSISH*DHMYGC
Trigger: ACAGCCGTACATGTGATCCCAGTGACTGATAGATCT...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261491.9
3UTR CAA 72 bp TCATCCATCAGTGAACAGTTGGGTTGCTTCCACTTTTaGGCTCCTATGAATAACGCTGCTACGAACATGGTG +
Preference number: 4 (lower is better)
Translates to: SSISEQLGCFHF*APMNNAATNMV
Trigger: CACCATGTTCGTAGCAGCGTTATTCATAGGAGCCAAAAAGTGGAAGCAACCCAACTGTTCACTGATGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611224.1
CDS-3UTR TCA 90 bp AGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAATGCGGCCTCGAAGTTTaGAGTATCGCTTTTTCCACC +
Preference number: 4 (lower is better)
Translates to: SGAYLSMQKTTRTATCFQCGLEV*SIAFST
Trigger: GGTGGAAAAAGCGATACTTCAAACTTCGAGGCCGCA...TTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR TCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACCTGTACAGACTTCAGTaGGCTGATCCAATCCTCCAT +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDLYRLQ*ADPILH
Trigger: ATGGAGGATTGGATCAGCTCACTGAAGTCTGTACAG...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCATCTTTTGTGAGCCTTaGATTTACACACTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: LPRNSTNMITPPTVECSFIFCEP*IYTLRR
Trigger: CCTGCGAAGTGTGTAAATTCAAGGCTCACAAAAGAT...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000627777.2
CDS-3UTR TCA 90 bp GTGGCGATTCCAGCTGCAAAGGAACCCTGCCAACTAGCAAAGATTCTGTTTCATAGGAACTTTACTCCCTaGTTATCTCCACTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: VAIPAAKEPCQLAKILFHRNFTP*LSPLLE
Trigger: TTCTAAGAGTGGAGATAATCAGGGAGTAAAGTTCCT...ATGAAACAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGCTGGAATCGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCGAGCTTATCGATTTCTaGCAAAACCCAACCTACACT +
Preference number: 4 (lower is better)
Translates to: LPRNSTNMITPPTVECSFELIDF*QNPTYT
Trigger: AGTGTAGGTTGGGTTTTGTCAGAAATCGATAAGCTC...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR TCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGGGCAACACTCCCAGCTaGCACTGTTTATTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRGNTPS*HCLFKL
Trigger: CAACTTGAATAAACAGTGTCAGCTGGGAGTGTTGCC...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGGCAACACTCCCAGCTaGCACTGTTTATTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLGNTPS*HCLFKL
Trigger: CAACTTGAATAAACAGTGTCAGCTGGGAGTGTTGCC...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp TCAATGTTTGCCAGTAACATTTTGTTGATAATCGAACTCCCAGCAATTGAGGCAGGTGTCATCGTCATATaGACCTCCCCAGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: SMFASNILLIIELPAIEAGVIVI*TSPAKN
Trigger: GTTCTTGGCTGGGGAGGTTCATATGACGATGACACC...TGCCTCAATTGCTGGGAGTTCGATTATCAACAAAATGTTACTGGCAAACATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCAAGTTTCTCTAGGATCTaGGGAAGTTGGGTGTCATCG +
Preference number: 4 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPSFSRI*GSWVSS
Trigger: CGATGACACCCAACTTCCTCAGATCCTAGAGAAACT...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTCTTGGCAGAAGATATaGCCACTGCATGTTCATCAG +
Preference number: 4 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHSWQKI*PLHVHQ
Trigger: CTGATGAACATGCAGTGGTCATATCTTCTGCCAAGA...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCTTGGCAGAAGATATaGCCACTGCATGTTCATCAG +
Preference number: 4 (lower is better)
Translates to: TSLPRNSTNMITPPTVECSWQKI*PLHVHQ
Trigger: CTGATGAACATGCAGTGGTCATATCTTCTGCCAAGA...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR TCA 90 bp AGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAATTCCGGCTTCCTCAATaGCTTGCCTCACTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SGAYLSMQKTTRTATCFQFRLPQ*LASLLS
Trigger: AGAAAGCAGTGAGGCAAGTCATTGAGGAAGCCGGAA...TTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp TCTTTGTACTCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCATCACACTCAAGTTaGACCCTTTGTTCTAAATTC +
Preference number: 4 (lower is better)
Translates to: SLYSPKLSRSSQAATSSVPSHSS*TLCSKF
Trigger: GAATTTAGAACAAAGGGTTCAACTTGAGTGTGATGG...CACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR TCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTCAGTTTAATGACCCTTaGAACTGCCATTTGCATGCT +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQAQFNDP*NCHLHA
Trigger: AGCATGCAAATGGCAGTTTCAAGGGTCATTAAACTG...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR TCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGCACTGGGCTATTCGATaGTGCTGCAGTTTAATGACC +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRHWAIR*CCSLMT
Trigger: GGTCATTAAACTGCAGCATCATCGAATAGCCCAGTG...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AACTTTGGCACTATTCGAAATACGGTGCTTCTGTTGTTCCTTTTGGTGCAATCCCACTGGGCTATTCGATaGTGCTGCAGTTTAATGACC +
Preference number: 4 (lower is better)
Translates to: NFGTIRNTVLLLFLLVQSHWAIR*CCSLMT
Trigger: GGTCATTAAACTGCAGCATCATCGAATAGCCCAGTG...GGATTGCACCAAAAGGAACAACAGAAGCACCGTATTTCGAATAGTGCCAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAATGCTCCAAAAGACAGTaGATTGTGGCTGCGTCACAT +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQECSKRQ*IVAASH
Trigger: ATGTGACGCAGCCACAATTCACTGTCTTTTGGAGCA...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGTGCTCCAAAAGACAGTaGATTGTGGCTGCGTCACAT +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRCSKRQ*IVAASH
Trigger: ATGTGACGCAGCCACAATTCACTGTCTTTTGGAGCA...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp TCATTATACAGCGCCTTCACATTGATGGCTATTTCAGTGGCAGTGTCTCTTGTATGCTCCAAAAGACAGTaGATTGTGGCTGCGTCACAT +
Preference number: 4 (lower is better)
Translates to: SLYSAFTLMAISVAVSLVCSKRQ*IVAASH
Trigger: ATGTGACGCAGCCACAATTCACTGTCTTTTGGAGCA...TACAAGAGACACTGCCACTGAAATAGCCATCAATGTGAAGGCGCTGTATAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAACCCAGATCCAGGCTGTaGACTTGTCTTCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCEPRSRL*TCLLLL
Trigger: CAGAAGCAGAAGACAAGTTCACAGCCTGGATCTGGG...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000379274.6
CDS-3UTR TCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACTGTAGAGAGCGGGTaGGTCTGGGTTATCTGTCAG +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLITVESG*VWVICQ
Trigger: CTGACAGATAACCCAGACTCACCCGCTCTCTACAGT...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGGATGTCACCTACGAGTaGAAAGCTCACCAAACGAAC +
Preference number: 4 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQDVTYE*KAHQTN
Trigger: GTTCGTTTGGTGAGCTTTTCACTCGTAGGTGACATC...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATCACTCCCCAAAGCTGTaGTCTGATCCCATGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYHSPKL*SDPMEK
Trigger: CTTCTCCATGGGATCAGATCACAGCTTTGGGGAGTG...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTGCTAAAGGAAGATTTTaGTTCGGTAGATCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQAAKGRF*FGRSAV
Trigger: CACTGCAGATCTACCGAATCAAAATCTTCCTTTAGC...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261491.9
CDS-3UTR TCA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCTGAGAGATGTAGGATaGGTTAATTGGAGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLLRDVG*VNWSGA
Trigger: CGCCCCACTCCAATTAACTCATCCTACATCTCTCAG...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGGTAGAAAGGACACAATaGGCCAATGCCAAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQVERTQ*ANAKVS
Trigger: ACTGACTTTGGCATTGGCTCATTGTGTCCTTTCTAC...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAACATTTTTGGGGCAGTaGGATGCAACAGGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SGAYLSMQKTTRTATCFQTFLGQ*DATGAP
Trigger: TGGAGCTCCTGTTGCATCTCACTGCCCCAAAAATGT...TTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCTGCATACTGTTGCTATaGAAACTGTGTCATCTTTCA +
Preference number: 4 (lower is better)
Translates to: NGTERKYILADGLPFPALCILLL*KLCHLS
Trigger: TGAAAGATGACACAGTTTTCATAGCAACAGTATGCA...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAAGGTCATAGACACTaGCTCATCTTGCTTAGGAGT +
Preference number: 4 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMQGHRH*LILLRS
Trigger: ACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTG...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTTCATCTATGGCATGTaGTTATGCCAAGGCACTAAG +
Preference number: 4 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIFIYGM*LCQGTK
Trigger: CTTAGTGCCTTGGCATAATCACATGCCATAGATGAA...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAATGTGTAGCTAGACACTaGGAATACAAAGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQECVARH*EYKGGE
Trigger: CTCTCCCCCTTTGTATTCTCAGTGTCTAGCTACACA...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCAGTCTATCAAGTGAATaGAGGAACAGGGCATTTCAG +
Preference number: 4 (lower is better)
Translates to: SPTAKYQATEVLQWCLLISLSSE*RNRAFQ
Trigger: CTGAAATGCCCTGTTCCTTCATTCACTTGATAGACT...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCAAGGAGACTCCTCTCTaGAGTAACCTGAAAAACACT +
Preference number: 4 (lower is better)
Translates to: LPRNSTNMITPPTVECSFKETPL*SNLKNT
Trigger: AGTGTTTTTCAGGTTACTTCAGAGAGGAGTCTCCTT...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261491.9
CDS-3UTR TCA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCAAGGAGACTCCTCTCTaGAGTAACCTGAAAAACACT +
Preference number: 4 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIKETPL*SNLKNT
Trigger: AGTGTTTTTCAGGTTACTTCAGAGAGGAGTCTCCTT...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTTCTGAACAGGCTGTaGACTTGTCTTCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHFLNRL*TCLLLL
Trigger: CAGAAGCAGAAGACAAGTTCACAGCCTGTTCAGAAA...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337343.9
ENST00000536612.3
CDS-3UTR TCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGTGTACTCTCCCAAATTaGGCAGATCCAGCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVCTLPN*ADPAKQ
Trigger: CTGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACA...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337343.9
ENST00000536612.3
CDS-3UTR TCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAAGCCCCTCTGATGTCATaGCGGATGAAGATATCTTTG +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQEAPLMS*RMKISL
Trigger: CAAAGATATCTTCATCCGTCATGACATCAGAGGGGC...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337343.9
ENST00000536612.3
CDS-3UTR TCA 90 bp ATAACGCTGCTACGAACATGGTGTAGAACTGCTTCACAATTGTATTGTTTTCGGCCTTTCACCTCACAGTaGCCTGTCAGAATTTCCCTC +
Preference number: 4 (lower is better)
Translates to: ITLLRTWCRTASQLYCFRPFTSQ*PVRISL
Trigger: GAGGGAAATTCTGACAGGTCACTGTGAGGTGAAAGG...CCGAAAACAATACAATTGTGAAGCAGTTCTACACCATGTTCGTAGCAGCGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611224.1
CDS-3UTR TCA 90 bp CCTGAAAATGCGACCTTTCACCTCACAGTGACCTGTCAGAATTTCCCTCCAGTTCAAATACTGAAACCATaGATAAGGAAGATCGACCCT +
Preference number: 4 (lower is better)
Translates to: PENATFHLTVTCQNFPPVQILKP*IRKIDP
Trigger: AGGGTCGATCTTCCTTATTCATGGTTTCAGTATTTG...AACTGGAGGGAAATTCTGACAGGTCACTGTGAGGTGAAAGGTCGCATTTTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611224.1
CDS-3UTR GCA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCAGAAAGACTCTCTCTaGACACGTTACAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQQKDSL*TRYRRW
Trigger: CCACCTTCTGTAACGTGTGCAGAGAGAGTCTTTCTG...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGCAGAAAGACTCTCTCTaGACACGTTACAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRQKDSL*TRYRRW
Trigger: CCACCTTCTGTAACGTGTGCAGAGAGAGTCTTTCTG...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTGTAGACGGAGAACACTaGCACATGTTTTGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSVDGEH*HMFCRR
Trigger: TCTGCGACAAAACATGTGGCAGTGTTCTCCGTCTAC...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACTACCAAAGTTAAGAGATGGTATAAATCTTTaGAGGCAGTGTGTACCATTG +
Preference number: 4 (lower is better)
Translates to: PAKQQLPLCPISELPKLRDGINL*RQCVPL
Trigger: CAATGGTACACACTGCCTGCAAAGATTTATACCATC...TCTTAACTTTGGTAGTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR GCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAACCATCGGAATCGGTaGTGTTTAGTGCAATTGGAG +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQNHRNR*CLVQLE
Trigger: CTCCAATTGCACTAAACAGCACCGATTCCGATGGTT...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp TGTCATTATACTCCACCTGTCCAACATTTTGGTACTGGCTCGTTCCAGTTTCTCAACCATCGGAATCGGTaGTGTTTAGTGCAATTGGAG +
Preference number: 4 (lower is better)
Translates to: CHYTPPVQHFGTGSFQFLNHRNR*CLVQLE
Trigger: CTCCAATTGCACTAAACAGCACCGATTCCGATGGTT...GAGAAACTGGAACGAGCCAGTACCAAAATGTTGGACAGGTGGAGTATAATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR GCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCAGAAGATATGACCACTaGATGTTCATCAGAATTGAG +
Preference number: 4 (lower is better)
Translates to: NGTERKYILADGLPFPALRRYDH*MFIRIE
Trigger: CTCAATTCTGATGAACATGCAGTGGTCATATCTTCT...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACAGAAGATATGACCACTaGATGTTCATCAGAATTGAG +
Preference number: 4 (lower is better)
Translates to: QIEQIQPSSNFLCAPFLNRRYDH*MFIRIE
Trigger: CTCAATTCTGATGAACATGCAGTGGTCATATCTTCT...GTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR GCA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTTCTGTGTGCAAAGCCTaGAGCAGTTGTTCGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLSVCKA*SSCSSF
Trigger: GAAGCTCGAACAACTGCTGCAGGCTTTGCACACAGA...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATGCCTGGGAATCTGTGTaGAAAGCCTGCAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYAWESV*KACSSC
Trigger: ACAACTGCTGCAGGCTTTGCACACAGATTCCCAGGC...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGAACACGGCTATGCCTTaGAAGCTGGGAAGAGGAATA +
Preference number: 4 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQNTAMP*KLGRGI
Trigger: TATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTT...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGTGTTCAACACGGCTATaGCTTGCAAGCTGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVCSTRL*LASWEE
Trigger: CTCTTCCCAGCTTGCAAGGCATAGCCGTGTTGAACA...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTGCTTCACCATCCACTTaGACTGGGACTCCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLIASPST*TGTPSS
Trigger: TGACGAAGGAGTCCCAGTGCAAGTGGATGGTGAAGC...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACACCCAAGATTTCAGAGTaGTCTCAAAGGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTPKISE*SQRLCP
Trigger: GGGACAGAGCCTTTGAGAGCACTCTGAAATCTTGGG...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAACCCAAGATTTCAGAGTaGTCTCAAAGGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SGAYLSMQKTTRTATCFQPKISE*SQRLCP
Trigger: GGGACAGAGCCTTTGAGAGCACTCTGAAATCTTGGG...TTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGCGACACCTCTTCTGTTaGCAAGTCAATGGCGTGATG +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVRHLFC*QVNGVM
Trigger: CATCACGCCATTGACTTGGCAACAGAAGAGGTGTCG...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAAGAGCATAGCTGCATCTaGGACACCTCTTCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCEEHSCI*DTSSVA
Trigger: GGCAACAGAAGAGGTGTCGCAGATGCAGCTATGCTC...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACGAGCATAGCTGCATCTaGGACACCTCTTCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYEHSCI*DTSSVA
Trigger: GGCAACAGAAGAGGTGTCGCAGATGCAGCTATGCTC...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTGCTGCAAAGGAACCCTaGCAACTAGCAAAGATTCTG +
Preference number: 4 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSAAKEP*QLAKIL
Trigger: CAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGC...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGGCTGCAAAGGAACCCTaGCAACTAGCAAAGATTCTG +
Preference number: 4 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQAAKEP*QLAKIL
Trigger: CAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGC...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCGAGGTGCTTCAGTGGTaGTTACTTATCTATGCAGAA +
Preference number: 4 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIEVLQW*LLIYAE
Trigger: TTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACATCAAGCCACAGAGGTaGTTCAGTGGTGCTTACTTA +
Preference number: 4 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHIKPQR*FSGAYL
Trigger: TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGAT...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCCACTGTTTAGACAATaGAATCGTCTCAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: LPRNSTNMITPPTVECSFPLFRQ*NRLRFL
Trigger: GAGGAATCTGAGACGATTGCATTGTCTAAACAGTGG...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000379274.6
CDS-3UTR GCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCAACCACATATTGTTATaGAGTTGCACAGTAGGAACA +
Preference number: 4 (lower is better)
Translates to: NGTERKYILADGLPFPALNHILL*SCTVGT
Trigger: TGTTCCTACTGTGCAACTGCATAACAATATGTGGTT...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAAAGTCATTTGGGCCCTaGACAGCCATGCATAGACAA +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTKSFGP*TAMHRQ
Trigger: TTGTCTATGCATGGCTGTGCAGGGCCCAAATGACTT...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACATCTCACCCCAGCTCATaGATAGATCAAAGCATAGAG +
Preference number: 4 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTSHPSS*IDQSIE
Trigger: CTCTATGCTTTGATCTATGCATGAGCTGGGGTGAGA...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTGTCATTGCAGTCAGGTaGAGGTGGGAACTTCTCACC +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLIVIAVR*RWELLT
Trigger: GGTGAGAAGTTCCCACCTGCACCTGACTGCAATGAC...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTAGGGTCTCACTATGTTaGCGAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLRVSLC*RGWSQT
Trigger: AGTTTGAGACCAGCCTCGGCAACATAGTGAGACCCT...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCAATGATCTGCACCAGTaGTGTCCAATAGAATTTTTG +
Preference number: 4 (lower is better)
Translates to: NGTERKYILADGLPFPALNDLHQ*CPIEFL
Trigger: CAAAAATTCTATTGGACAGCACTGGTGCAGATCATT...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAAGTGGGCCTGAAATTCTaGATTTCTGTAAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQEVGLKF*ISVSSQ
Trigger: CTGGGAGCTTACAGAAATGCAGAATTTCAGGCCCAC...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTTGCTATGTGTCCTCATaGATGAGCTATGTCAACAAG +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQACYVSS*MSYVNK
Trigger: CTTGTTGACATAGCTCATGCATGAGGACACATAGCA...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261491.9
CDS-3UTR GCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAAGTGCTGTGGGGACTaGTCTGGGAGGCTATTCTAT +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVKCCGD*SGRLFY
Trigger: ATAGAATAGCCTCCCAGAGCAGTCCCCACAGCACTT...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTAAGTCAATCAGGGGATaGCATAGAAGAGACAAGCCC +
Preference number: 4 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSKSIRG*HRRDKP
Trigger: GGGCTTGTCTCTTCTATGGCATCCCCTGATTGACTT...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTTGTTTTCTGGGGGTGTaGTCAGCACACTATACAGCT +
Preference number: 4 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSCFLGV*SAHYTA
Trigger: AGCTGTATAGTGTGCTGAGCACACCCCCAGAAAACA...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACACATGGAGAAAATACCTaGCTAGGGAAGTCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTHGENT*LGKSGR
Trigger: CCTACCTGACTTCCCTAGGCAGGTATTTTCTCCATG...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CTGTCAGTTTCTGTAATTCCACCTCCACAGAGTGTAAGGCATTGGATACTCGCTGATGGTATAAATCTTTaGAGGCAGTGTGTACCTTCG +
Preference number: 4 (lower is better)
Translates to: LSVSVIPPPQSVRHWILADGINL*RQCVPS
Trigger: CGAAGGTACACACTGCCTGCAAAGATTTATACCATC...AGCGAGTATCCAATGCCTTACACTCTGTGGAGGTGGAATTACAGAAACTGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CCA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCTCGTAGGGTTCTCTaGTCTGTACAGACTTCAGTG +
Preference number: 4 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLPRRVL*SVQTSV
Trigger: CACTGAAGTCTGTACAGACCAGAGAACCCTACGAGG...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CCTGGAAGTAGGGAAGCTTTTGGTGGCAATTTGAGTTCATATGTCATTATACTCCCTCGTAGGGTTCTCTaGTCTGTACAGACTTCAGTG +
Preference number: 4 (lower is better)
Translates to: PGSREAFGGNLSSYVIILPRRVL*SVQTSV
Trigger: CACTGAAGTCTGTACAGACCAGAGAACCCTACGAGG...GAGTATAATGACATATGAACTCAAATTGCCACCAAAAGCTTCCCTACTTCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGACCTGTCCAACATTTTaGTACTGGCTCGTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQTCPTF*YWLVPV
Trigger: AACTGGAACGAGCCAGTACCAAAATGTTGGACAGGT...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGCAACATGATTTCCCTTaGTTTGACGGCTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQQHDFP*FDGFLG
Trigger: TCCCAGAAAGCCGTCAAACCAAGGGAAATCATGTTG...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp TCCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATCAACATGATTTCCCTTaGTTTGACGGCTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SKLFNSLENSLHMTHFRYQHDFP*FDGFLG
Trigger: TCCCAGAAAGCCGTCAAACCAAGGGAAATCATGTTG...ATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CCA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTATGCCTTGCAAGCTaGGAAGAGGAATATACTGCC +
Preference number: 4 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPLCLAS*EEEYTA
Trigger: GGCAGTATATTCCTCTTCCCAGCTTGCAAGGCATAG...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp TCGCTTCACATGACCCACTTTCGGTATCCCCAGATCCTTAAGATCTCGCCTTTCCTTGTCATCAAAGGATaGTGCAGCAAATATATCATC +
Preference number: 4 (lower is better)
Translates to: SLHMTHFRYPQILKISPFLVIKG*CSKYII
Trigger: GATGATATATTTGCTGCACCATCCTTTGATGACAAG...GAAAGGCGAGATCTTAAGGATCTGGGGATACCGAAAGTGGGTCATGTGAAGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CCA 90 bp CTGTCAGTTTCTGTAATTCCACCTCCACAGAGTGTAAGGCATTGGATACTCGCTATGGGTTCGGAGAACTaGTTTACCAGAATCACACTT +
Preference number: 4 (lower is better)
Translates to: LSVSVIPPPQSVRHWILAMGSEN*FTRITL
Trigger: AAGTGTGATTCTGGTAAACCAGTTCTCCGAACCCAT...AGCGAGTATCCAATGCCTTACACTCTGTGGAGGTGGAATTACAGAAACTGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CCA 90 bp ATCTGTTTCTGTGCTGTCATAATCAGAGGACTGATTAGCTGGTTCACAGGGGTGCTGTTGCCAAGTCAATaGCGTGATGGATGTACAAAT +
Preference number: 4 (lower is better)
Translates to: ICFCAVIIRGLISWFTGVLLPSQ*RDGCTN
Trigger: ATTTGTACATCCATCACGCCATTGACTTGGCAACAG...CACCCCTGTGAACCAGCTAATCAGTCCTCTGATTATGACAGCACAGAAACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CCA 90 bp AGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGCTTTATTCAGGGCATaGGAGCAGGCATTCACAGCA +
Preference number: 4 (lower is better)
Translates to: SGAYLSMQKTTRTATCFQALFRA*EQAFTA
Trigger: TGCTGTGAATGCCTGCTCCCATGCCCTGAATAAAGC...TTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGGCTTTATTCAGGGCATaGGAGCAGGCATTCACAGCA +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVALFRA*EQAFTA
Trigger: TGCTGTGAATGCCTGCTCCCATGCCCTGAATAAAGC...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATCCGGGCACCTTGGGTTaGCTTTATTCAGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYPGTLG*LYSGHG
Trigger: CCCATGCCCTGAATAAAGCCAACCCAAGGTGCCCGG...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCCAGAGTGTAAGGCATTaGATACTCGCTCTTCATGTG +
Preference number: 4 (lower is better)
Translates to: TSLPRNSTNMITPPTVECQSVRH*ILALHV
Trigger: CACATGAAGAGCGAGTATCCAATGCCTTACACTCTG...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACTTACACCTCCGACTGTaGAGTGCTCCTTCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYLHLRL*SAPSKL
Trigger: GAGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAA...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTAGAGTTCTGGGAACCTaGCACCTCCTGTTTGGTTGC +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLIRVLGT*HLLFGC
Trigger: GCAACCAAACAGGAGGTGCCAGGTTCCCAGAACTCT...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAAGTCAGTGAAGTCATTTaGGCCCTGCACAGCCATGCA +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKVSEVI*ALHSHA
Trigger: TGCATGGCTGTGCAGGGCCCAAATGACTTCACTGAC...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGTGTGATCTGATCCCATaGAGAAGCTCTTCCCTACTT +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQCDLIP*RSSSLL
Trigger: AAGTAGGGAAGAGCTTCTCCATGGGATCAGATCACA...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATAGCCTTCAGAATAGCTaGGACTACAGGCGCATGCCA +
Preference number: 4 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYSLQNS*DYRRMP
Trigger: TGGCATGCGCCTGTAGTCCCAGCTATTCTGAAGGCT...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTCCTGTGTCCCACACTaGCTACAAAAATACAACCAC +
Preference number: 4 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHSCVPH*LQKYNH
Trigger: GTGGTTGTATTTTTGTAGCCAGTGTGGGACACAGGA...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGGAGAGACCACTCTGGTaGGAAAGAGTGAAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQERPLW*ERVKVE
Trigger: TTCTACTTTCACTCTTTCCCACCAGAGTGGTCTCTC...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CTGCTACGAACATGGTGTAGAACTGCTTCACAATTGTATTGTTTTCGGCTGGGCTGCGAATGTGCACATTaGGCAACTCCAATTTTTCAC +
Preference number: 4 (lower is better)
Translates to: LLRTWCRTASQLYCFRLGCECAH*ATPIFH
Trigger: GTGAAAAATTGGAGTTGCCCAATGTGCACATTCGCA...GCCCAGCCGAAAACAATACAATTGTGAAGCAGTTCTACACCATGTTCGTAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611224.1
3UTR CAA 72 bp ACAAAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTaGGTTTGCCCAGAGTGCACACATGCTCATGAATGC +
Preference number: 4 (lower is better)
Translates to: TKQLLFLAVYLL*VCPECTHAHEC
Trigger: GCATTCATGAGCATGTGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 72 bp GAATGTGCTGAATGTCAGGGTAAAGTGTCCAATCTTTaGAGCCTCCTCCTTTTGTGGACCTTGTACAAAGTC +
Preference number: 4 (lower is better)
Translates to: ECAECQGKVSNL*SLLLLWTLYKV
Trigger: GACTTTGTACAAGGTCCACAAAAGGAGGAGGCTCAAAAGATTGGACACTTTACCCTGACATTCAGCACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 72 bp GTGGCACCAAAAGGATCAATGTTTGCCAGTAACATTTaGTTGATAATCGAACTCCCAGCAATTGAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: VAPKGSMFASNI*LIIELPAIEAA
Trigger: GGCTGCCTCAATTGCTGGGAGTTCGATTATCAACAAAATGTTACTGGCAAACATTGATCCTTTTGGTGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACTGCGGCCTCGAAGTTTaGAGTATCGCTTTTTCCACC +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYCGLEV*SIAFST
Trigger: GGTGGAAAAAGCGATACTTCAAACTTCGAGGCCGCA...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR TCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTCAGACTTCAGTGAGCTaGTCCAATCCTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLIQTSVS*SNPPSP
Trigger: AGGAGATGGAGGATTGGATCAGCTCACTGAAGTCTG...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGCTGTACAGACTTCAGTaGGCTGATCCAATCCTCCAT +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVLYRLQ*ADPILH
Trigger: ATGGAGGATTGGATCAGCTCACTGAAGTCTGTACAG...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AATGGCGTGATGGATGTACAAATGGGTTCGGAGAACTGGTTTACCAGAATCACACCAGTTGTGCATCCCTaGGAAATGTTCCACATTAAA +
Preference number: 4 (lower is better)
Translates to: NGVMDVQMGSENWFTRITPVVHP*EMFHIK
Trigger: TTTAATGTGGAACATTTCTCAGGGATGCACAACTGG...TGTGATTCTGGTAAACCAGTTCTCCGAACCCATTTGTACATCCATCACGCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp TCCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATATCTTTTGTGAGCCTTaGATTTACACACTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: SKLFNSLENSLHMTHFRYIFCEP*IYTLRR
Trigger: CCTGCGAAGTGTGTAAATTCAAGGCTCACAAAAGAT...ATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR TCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTATTAAATCAAACACCTaGGCCGGATTTAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQAIKSNT*AGFSNC
Trigger: ACAGTTGCTAAATCCGGCTCAGGTGTTTGATTTAAT...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR TCA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGGAGCTTATCGATTTCTaGCAAAACCCAACCTACACT +
Preference number: 4 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMELIDF*QNPTYT
Trigger: AGTGTAGGTTGGGTTTTGTCAGAAATCGATAAGCTC...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCGAGCTTATCGATTTCTaGCAAAACCCAACCTACACT +
Preference number: 4 (lower is better)
Translates to: TSLPRNSTNMITPPTVECELIDF*QNPTYT
Trigger: AGTGTAGGTTGGGTTTTGTCAGAAATCGATAAGCTC...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR TCA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCATCTTGGCAGAAGATATaGCCACTGCATGTTCATCAG +
Preference number: 4 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPSWQKI*PLHVHQ
Trigger: CTGATGAACATGCAGTGGTCATATCTTCTGCCAAGA...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTTTCCGGCTTCCTCAATaGCTTGCCTCACTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLIFRLPQ*LASLLS
Trigger: AGAAAGCAGTGAGGCAAGTCATTGAGGAAGCCGGAA...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGTTTAATGACCCTTaGAACTGCCATTTGCATGCT +
Preference number: 4 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMQFNDP*NCHLHA
Trigger: AGCATGCAAATGGCAGTTTCAAGGGTCATTAAACTG...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTGCCAAGTCAATGGCGTaGTGGATGTACAAATGGGTT +
Preference number: 4 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLAKSMA*WMYKWV
Trigger: AACCCATTTGTACATCCATCACGCCATTGACTTGGC...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAAACAGCGCCTTCACATTaGTGGCTATTTCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKTAPSH*WLFQWQ
Trigger: CTGCCACTGAAATAGCCATCAATGTGAAGGCGCTGT...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACAGCGCCTTCACATTaGTGGCTATTTCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLITAPSH*WLFQWQ
Trigger: CTGCCACTGAAATAGCCATCAATGTGAAGGCGCTGT...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAAAGAATTCGCTTCACATaGCCCACTTTCGGTATCCCC +
Preference number: 4 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCERIRFT*PTFGIP
Trigger: GGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCT...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCAGAAATAGCACCAATATaGTTACACCTCCGACTGTGG +
Preference number: 4 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPEIAPI*LHLRLW
Trigger: CCACAGTCGGAGGTGTAATCATATTGGTGCTATTTC...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGAAAAAGGAGACCTCTaGCTTCGTAAGTGCAGATAC +
Preference number: 4 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLEKGDL*LRKCRY
Trigger: GTATCTGCACTTACGAAGTCAGAGGTCTCCTTTTTC...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATCCCAAAGCTGTGATCTaGTCCCATGGAGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYPKAVI*SHGEAL
Trigger: AAGAGCTTCTCCATGGGATCAGATCACAGCTTTGGG...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCTGCTTAAGCGAGAAATaGAAGGGGTCATTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: LPRNSTNMITPPTVECSFCLSEK*KGSFCS
Trigger: ACTACAAAATGACCCCTTTCATTTCTCGCTTAAGCA...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261491.9
CDS-3UTR TCA 90 bp AGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAATAGGACACAGTGGATaGAGGAACAAGCTATTCCGG +
Preference number: 4 (lower is better)
Translates to: SGAYLSMQKTTRTATCFQIGHSG*RNKLFR
Trigger: CCGGAATAGCTTGTTCCTTCATCCACTGTGTCCTAT...TTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACAATAGGACACAGTGGATaGAGGAACAAGCTATTCCGG +
Preference number: 4 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTIGHSG*RNKLFR
Trigger: CCGGAATAGCTTGTTCCTTCATCCACTGTGTCCTAT...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACAAGCAAGGGTGATGAATaGGTTTCAGCTCATTGCTGG +
Preference number: 4 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTSKGDE*VSAHCW
Trigger: CCAGCAATGAGCTGAAACTCATTCATCACCCTTGCT...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGCCCGTGATTAAGTTGTaGACAAATGAACATGCCACA +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQPVIKL*TNEHAT
Trigger: TGTGGCATGTTCATTTGTTCACAACTTAATCACGGG...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTATGTGTCCTCATGCATaGGCTATGTCAACAAGGACA +
Preference number: 4 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLMCPHA*AMSTRT
Trigger: TGTCCTTGTTGACATAGCTCATGCATGAGGACACAT...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTCATCAATCACTGAGATaGGAAAGCACAGATATTTGC +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQAHQSLR*ESTDIC
Trigger: GCAAATATCTGTGCTTTCTCATCTCAGTGATTGATG...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261491.9
CDS-3UTR TCA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCTGCAGGGTATGGTCTaGTCCACATTTACTGGTGTT +
Preference number: 4 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLLQGMV*STFTGV
Trigger: AACACCAGTAAATGTGGATCAGACCATACCCTGCAG...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGGTAGAAAGGACACAATaGGCCAATGCCAAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRVERTQ*ANAKVS
Trigger: ACTGACTTTGGCATTGGCTCATTGTGTCCTTTCTAC...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTAGAGAACGCAGTCAGTaGTCCATGCTCTGGATTAAA +
Preference number: 4 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLRERSQ*SMLWIK
Trigger: TTTAATCCAGAGCATGGATCACTGACTGCGTTCTCT...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCAAGGTCATAGACACTaGCTCATCTTGCTTAGGAGT +
Preference number: 4 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQQGHRH*LILLRS
Trigger: ACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTG...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACAATGCCTATCAAACTGTaGATACACATACAAGTCGGG +
Preference number: 4 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTMPIKL*IHIQVG
Trigger: CCCGACTTGTATGTGTATTCACAGTTTGATAGGCAT...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAATTTCTGAACAGGCTGTaGACTTGTCTTCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQEFLNRL*TCLLLL
Trigger: CAGAAGCAGAAGACAAGTTCACAGCCTGTTCAGAAA...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337343.9
ENST00000536612.3
CDS-3UTR TCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAATGTACTCTCCCAAATTaGGCAGATCCAGCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKCTLPN*ADPAKQ
Trigger: CTGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACA...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337343.9
ENST00000536612.3
CDS-3UTR TCA 90 bp CTGCTACGAACATGGTGTAGAACTGCTTCACAATTGTATTGTTTTCGGCTGGGCCCTCCAGTTCAAGGCTaGATAATGTCCCATTATTAT +
Preference number: 4 (lower is better)
Translates to: LLRTWCRTASQLYCFRLGPPVQG*IMSHYY
Trigger: ATAATAATGGGACATTATTCAGCCTTGAACTGGAGG...GCCCAGCCGAAAACAATACAATTGTGAAGCAGTTCTACACCATGTTCGTAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611224.1
CDS-3UTR GCA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATGGAAAGAACTGGTTTaGTTCAATAGCTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLWKELV*FNSCPS
Trigger: AGAGGGACAGCTATTGAAGCAAACCAGTTCTTTCCA...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR GCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGCAGAAAGACTCTCTCTaGACACGTTACAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVQKDSL*TRYRRW
Trigger: CCACCTTCTGTAACGTGTGCAGAGAGAGTCTTTCTG...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCATTTGTTGCTCTCACTaGACATCTTTTGTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: LPRNSTNMITPPTVECSFICCSH*TSFVSL
Trigger: AAGGCTCACAAAAGATGTGCAGTGAGAGCAACAAAT...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000627777.2
CDS-3UTR GCA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCGATGGTATAAATCTTTaGAGGCAGTGTGTACCATTG +
Preference number: 4 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIDGINL*RQCVPL
Trigger: CAATGGTACACACTGCCTGCAAAGATTTATACCATC...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCAAACCATCGGAATCGGTaGTGTTTAGTGCAATTGGAG +
Preference number: 4 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPNHRNR*CLVQLE
Trigger: CTCCAATTGCACTAAACAGCACCGATTCCGATGGTT...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGAACCATCGGAATCGGTaGTGTTTAGTGCAATTGGAG +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRNHRNR*CLVQLE
Trigger: CTCCAATTGCACTAAACAGCACCGATTCCGATGGTT...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp ATCTGTTTCTGTGCTGTCATAATCAGAGGACTGATTAGCTGGTTCACAGGGGTGACAGAACGAAAATGTTaGTCTACAGAAACCATCGGA +
Preference number: 4 (lower is better)
Translates to: ICFCAVIIRGLISWFTGVTERKC*STETIG
Trigger: TCCGATGGTTTCTGTAGAGCAACATTTTCGTTCTGT...CACCCCTGTGAACCAGCTAATCAGTCCTCTGATTATGACAGCACAGAAACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR GCA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCATAAAATTCTTCAGATaGTTCTGGAGGTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIIKFFR*FWRSWK
Trigger: CTTCCAGGACCTCCAGAAGCATCTGAAGAATTTTAT...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAATCTGTGTGCAAAGCCTaGAGCAGTTGTTCGAGCTTC +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKSVCKA*SSCSSF
Trigger: GAAGCTCGAACAACTGCTGCAGGCTTTGCACACAGA...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCGCTTCCTCAATGACTTaGCTCACTGCTTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIASSMT*LTAFFK
Trigger: TTTAAAGAAAGCAGTGAGGCAAGTCATTGAGGAAGC...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTGCTTCCTCAATGACTTaGCTCACTGCTTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQAASSMT*LTAFFK
Trigger: TTTAAAGAAAGCAGTGAGGCAAGTCATTGAGGAAGC...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR GCA 90 bp TCTTTGTACTCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGATTCATCTGTTTCTGTaGTGTCATAATCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: SLYSPKLSRSSQAATSSVIHLFL*CHNQRT
Trigger: AGTCCTCTGATTATGACAGCACAGAAACAGATGAAT...CACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR GCA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAATGTTCAACACGGCTATaGCTTGCAAGCTGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCECSTRL*LASWEE
Trigger: CTCTTCCCAGCTTGCAAGGCATAGCCGTGTTGAACA...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATTGTTCAACACGGCTATaGCTTGCAAGCTGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYCSTRL*LASWEE
Trigger: CTCTTCCCAGCTTGCAAGGCATAGCCGTGTTGAACA...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAACCCAAGATTTCAGAGTaGTCTCAAAGGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCEPKISE*SQRLCP
Trigger: GGGACAGAGCCTTTGAGAGCACTCTGAAATCTTGGG...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTACAGTGAATTGTGGCTaGGTCACATATCCTAGTAAT +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQATVNCG*VTYPSN
Trigger: ATTACTAGGATATGTGACGCAGCCACAATTCACTGT...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR GCA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCACAAGAACAGCCACTTaGTTCCAAGGACTTTGTATT +
Preference number: 4 (lower is better)
Translates to: SPTAKYQATEVLQWCLLITRTAT*FQGLCI
Trigger: AATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGT...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGGAGGTGCTTCAGTGGTaGTTACTTATCTATGCAGAA +
Preference number: 4 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMEVLQW*LLIYAE
Trigger: TTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTATCAAGCCACAGAGGTaGTTCAGTGGTGCTTACTTA +
Preference number: 4 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSIKPQR*FSGAYL
Trigger: TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGAT...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGCCACTGTTTAGACAATaGAATCGTCTCAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQPLFRQ*NRLRFL
Trigger: GAGGAATCTGAGACGATTGCATTGTCTAAACAGTGG...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTTCTCACCCCAGCTCATaGATAGATCAAAGCATAGAG +
Preference number: 4 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSSHPSS*IDQSIE
Trigger: CTCTATGCTTTGATCTATGCATGAGCTGGGGTGAGA...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAAAGCCATTACAGTCATTaGAGTCAGGTGCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCESHYSH*SQVQVG
Trigger: TCCCACCTGCACCTGACTGCAATGACTGTAATGGCT...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACATGATCATGGCTCACTaGAGCCTTGAACTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYMIMAH*SLELLV
Trigger: GACCAGGAGTTCAAGGCTGCAGTGAGCCATGATCAT...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTTTCAGCAGCAGGATGTaGTCCCTGAATTCACTAGTT +
Preference number: 4 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLFSSRM*SLNSLV
Trigger: AACTAGTGAATTCAGGGAGCACATCCTGCTGCTGAA...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGGCAGTCAGTGATCCATaGTCTGGATTAAACATTCAG +
Preference number: 4 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMAVSDP*SGLNIQ
Trigger: CTGAATGTTTAATCCAGAGCATGGATCACTGACTGC...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGGCAGTCAGTGATCCATaGTCTGGATTAAACATTCAG +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQAVSDP*SGLNIQ
Trigger: CTGAATGTTTAATCCAGAGCATGGATCACTGACTGC...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCAAGTTTCACTCTTTTCTaGAGCAAACAGAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPSFTLF*SKQSPL
Trigger: CAGTGGGCTCTGTTTGCTGCAGAAAAGAGTGAAACT...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAATCTCGCCTTTCCAGATaGAAAAGTTCAGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKSRLSR*KSSAPL
Trigger: CAGAGGGGCTGAACTTTTGCATCTGGAAAGGCGAGA...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000337343.9
ENST00000536612.3
CDS-3UTR CCA 90 bp TCCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATCCAACATTTTGGTACTaGCTCGTTCCAGTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: SKLFNSLENSLHMTHFRYPTFWY*LVPVSL
Trigger: TAGAGAAACTGGAACGAGCCAGTACCAAAATGTTGG...ATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAACCTGTCCAACATTTTaGTACTGGCTCGTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTTCPTF*YWLVPV
Trigger: AACTGGAACGAGCCAGTACCAAAATGTTGGACAGGT...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp AGCTGCAAAGGAACCCTGCCAACTAGCAAAGATTCTGTTTCATTATACAGCGCCACGTCTTTTCTACTTTaGCAACGAAGTCCTTTACAG +
Preference number: 4 (lower is better)
Translates to: SCKGTLPTSKDSVSLYSATSFLL*QRSPLQ
Trigger: CTGTAAAGGACTTCGTTGCCAAAGTAGAAAAGACGT...GGCGCTGTATAATGAAACAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTACGTCTTTTCTACTTTaGCAACGAAGTCCTTTACAG +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQATSFLL*QRSPLQ
Trigger: CTGTAAAGGACTTCGTTGCCAAAGTAGAAAAGACGT...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGGGTTTGACGGCTTTCTaGGAGGAAGGTTTTGTAACG +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVGLTAF*EEGFVT
Trigger: CGTTACAAAACCTTCCTCCCAGAAAGCCGTCAAACC...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAGAGGACTGATTAGCTaGTTCACAGGGGTGAACTGT +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVRGLIS*FTGVNC
Trigger: ACAGTTCACCCCTGTGAACCAGCTAATCAGTCCTCT...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATACTTGCCCGGGCATCTaGAGACCGAGGTGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYTCPGI*RPRCSF
Trigger: AAAACTGCACCTCGGTCTCCAGATGCCCGGGCAAGT...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATCCACTTGCACTaGGACTCCTTCGTCACCAAA +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLITIHLH*DSFVTK
Trigger: TTTGGTGACGAAGGAGTCCCAGTGCAAGTGGATGGT...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACACCATCCACTTGCACTaGGACTCCTTCGTCACCAAA +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYTIHLH*DSFVTK
Trigger: TTTGGTGACGAAGGAGTCCCAGTGCAAGTGGATGGT...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACAATTTTGATAATCCCTaGAGGCTGAACCCACGCTTC +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDNFDNP*RLNPRF
Trigger: GAAGCGTGGGTTCAGCCTCCAGGGATTATCAAAATT...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCATGGGTTCGGAGAACTaGTTTACCAGAATCACACTT +
Preference number: 4 (lower is better)
Translates to: TSLPRNSTNMITPPTVECMGSEN*FTRITL
Trigger: AAGTGTGATTCTGGTAAACCAGTTCTCCGAACCCAT...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CCA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTAATGGGTTCGGAGAACTaGTTTACCAGAATCACACTT +
Preference number: 4 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLMGSEN*FTRITL
Trigger: AAGTGTGATTCTGGTAAACCAGTTCTCCGAACCCAT...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAATACTCGCTCTTCATGTaGCGATTCCAGCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKYSLFM*RFQLQR
Trigger: CCTTTGCAGCTGGAATCGCCACATGAAGAGCGAGTA...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACACAGAGTGTAAGGCATTaGATACTCGCTCTTCATGTG +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTQSVRH*ILALHV
Trigger: CACATGAAGAGCGAGTATCCAATGCCTTACACTCTG...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGAGTGTAAGGCATTaGATACTCGCTCTTCATGTG +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQEQSVRH*ILALHV
Trigger: CACATGAAGAGCGAGTATCCAATGCCTTACACTCTG...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGACAGAGGTGCTTCAGTaGTGCTTACTTATCTATGCA +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQTEVLQ*CLLIYA
Trigger: TGCATAGATAAGTAAGCACCACTGAAGCACCTCTGT...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAATGGGGTTTCATACACTaGTCAGGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKWGFIH*SGWSRT
Trigger: AGTTCGAGACCAGCCTGACCAGTGTATGAAACCCCA...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATGCTAGTAGAGTGCAGTaGTGTGATCTCAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYASRVQ*CDLSHC
Trigger: GCAGTGACTGAGATCACACCACTGCACTCTACTAGC...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAATGTTAGAGAGTTCTaGGAACCTGGCACCTCCTGT +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVNVREF*EPGTSC
Trigger: ACAGGAGGTGCCAGGTTCCCAGAACTCTCTAACATT...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACAAAGAAAATACATTCTaGCTGATGGCCTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDKENTF*LMASPS
Trigger: GGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTT...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACCAAAAATACAACCACTaGGTAGGTAGGGCTCATCTA +
Preference number: 4 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHQKYNH*VGRAHL
Trigger: TAGATGAGCCCTACCTACCCAGTGGTTGTATTTTTG...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACAGATACGGCTAAGCTGTaGGAAACAATAGTGCAATCA +
Preference number: 4 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTDTAKL*ETIVQS
Trigger: TGATTGCACTATTGTTTCCCACAGCTTAGCCGTATC...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACGATACGGCTAAGCTGTaGGAAACAATAGTGCAATCA +
Preference number: 4 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHDTAKL*ETIVQS
Trigger: TGATTGCACTATTGTTTCCCACAGCTTAGCCGTATC...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAACAGCGCTCAGCCATaGTTCAAGATTCCTAATGTT +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQNSAQP*FKIPNV
Trigger: AACATTAGGAATCTTGAACCATGGCTGAGCGCTGTT...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACACTGTTTATCTTCTGTTaGTTTGCCCAGAGTGCACAC +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTLFIFC*FAQSAH
Trigger: GTGTGCACTCTGGGCAAACCAACAGAAGATAAACAG...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTCTGTTTATCTTCTGTTaGTTTGCCCAGAGTGCACAC +
Preference number: 4 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSLFIFC*FAQSAH
Trigger: GTGTGCACTCTGGGCAAACCAACAGAAGATAAACAG...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACATTTTCCCTTCTACTGTaGGTTTACCATGCACAGCTC +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTFSLLL*VYHAQL
Trigger: GAGCTGTGCATGGTAAACCCACAGTAGAAGGGAAAA...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 72 bp TATGGCAAAAGCACAGGAGTGAAAAATGGTGAGGGTTaGTATGATGAAGGCCTGAAAGGCAGCAATGAAATC +
Preference number: 4 (lower is better)
Translates to: YGKSTGVKNGEG*YDEGLKGSNEI
Trigger: GATTTCATTGCTGCCTTTCAGGCCTTCATCATACAAACCCTCACCATTTTTCACTCCTGTGCTTTTGCCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 72 bp TTTAAACTATTTGCCCGCAACATGATTTCCCTTGGTTaGACGGCTTTCTGGGAGGAAGGTTTTGTAACGTCA +
Preference number: 4 (lower is better)
Translates to: FKLFARNMISLG*TAFWEEGFVTS
Trigger: TGACGTTACAAAACCTTCCTCCCAGAAAGCCGTCAAACCAAGGGAAATCATGTTGCGGGCAAATAGTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CAA 72 bp GCACCAAAAGGATCAATGTTTGCCAGTAACATTTTGTaGATAATCGAACTCCCAGCAATTGAGGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: APKGSMFASNIL*IIELPAIEAAS
Trigger: ACTGGCTGCCTCAATTGCTGGGAGTTCGATTATCAACAAAATGTTACTGGCAAACATTGATCCTTTTGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAAAGCTACACTAGCATCTaGGAGGTCAACTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQESYTSI*EVNFIK
Trigger: TTTGATGAAGTTGACCTCTCAGATGCTAGTGTAGCT...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR TCA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGCAGACTTCAGTGAGCTaGTCCAATCCTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLQTSVS*SNPPSP
Trigger: AGGAGATGGAGGATTGGATCAGCTCACTGAAGTCTG...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTGTACAGACTTCAGTaGGCTGATCCAATCCTCCAT +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKLYRLQ*ADPILH
Trigger: ATGGAGGATTGGATCAGCTCACTGAAGTCTGTACAG...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCAGTTGTGCATCCCTaGGAAATGTTCCACATTAAA +
Preference number: 4 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQPVVHP*EMFHIK
Trigger: TTTAATGTGGAACATTTCTCAGGGATGCACAACTGG...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTCCAGTTGTGCATCCCTaGGAAATGTTCCACATTAAA +
Preference number: 4 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLPVVHP*EMFHIK
Trigger: TTTAATGTGGAACATTTCTCAGGGATGCACAACTGG...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACATCTTTTGTGAGCCTTaGATTTACACACTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDIFCEP*IYTLRR
Trigger: CCTGCGAAGTGTGTAAATTCAAGGCTCACAAAAGAT...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACAAGGAACTTTACTCCCTaGTTATCTCCACTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTRNFTP*LSPLLE
Trigger: TTCTAAGAGTGGAGATAATCAGGGAGTAAAGTTCCT...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATGGCAACACTCCCAGCTaGCACTGTTTATTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYGNTPS*HCLFKL
Trigger: CAACTTGAATAAACAGTGTCAGCTGGGAGTGTTGCC...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAGATGCGTTGCAACTaGGTCTTCATAAATCGTCAT +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQKMRCN*VFINRH
Trigger: ATGACGATTTATGAAGACTCAGTTGCAACGCATCTT...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACAGATTATTCTGGTATTaGGCACAGGGAGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHRLFWY*AQGGFL
Trigger: AAGAAAACCTCCCTGTGCTCAATACCAGAATAATCT...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AGCTGCAAAGGAACCCTGCCAACTAGCAAAGATTCTGTTTCATTATACAGCGCCCATGACACATTTTTCTaGATATCCATCTACGGAATC +
Preference number: 4 (lower is better)
Translates to: SCKGTLPTSKDSVSLYSAHDTFF*ISIYGI
Trigger: GATTCCGTAGATGGATATTCAGAAAAATGTGTCATG...GGCGCTGTATAATGAAACAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTCATGACACATTTTTCTaGATATCCATCTACGGAATC +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQAHDTFF*ISIYGI
Trigger: GATTCCGTAGATGGATATTCAGAAAAATGTGTCATG...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR TCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGCAGTTTAATGACCCTTaGAACTGCCATTTGCATGCT +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRQFNDP*NCHLHA
Trigger: AGCATGCAAATGGCAGTTTCAAGGGTCATTAAACTG...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCACTGGGCTATTCGATaGTGCTGCAGTTTAATGACC +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYHWAIR*CCSLMT
Trigger: GGTCATTAAACTGCAGCATCATCGAATAGCCCAGTG...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATGCCAAGTCAATGGCGTaGTGGATGTACAAATGGGTT +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYAKSMA*WMYKWV
Trigger: AACCCATTTGTACATCCATCACGCCATTGACTTGGC...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGACTAGGAGTTGGAGGTaGTACCAATCTACATTCAAA +
Preference number: 4 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMTRSWR*YQSTFK
Trigger: TTTGAATGTAGATTGGTATCACCTCCAACTCCTAGT...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATACTGTAGAGAGCGGGTaGGTCTGGGTTATCTGTCAG +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYTVESG*VWVICQ
Trigger: CTGACAGATAACCCAGACTCACCCGCTCTCTACAGT...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATCACAATCCCAAATaGCCTAATCCATCAATTCAC +
Preference number: 4 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIYHNPK*PNPSIH
Trigger: GTGAATTGATGGATTAGGTCATTTGGGATTGTGATA...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTATTGCTGGAGTTAGCTaGAGAATGAATAGGACACAG +
Preference number: 4 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLIAGVS*RMNRTQ
Trigger: CTGTGTCCTATTCATTCTTCAGCTAACTCCAGCAAT...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACCTGAAATGTCCCCCGTaGTTAAGTTGTGAACAAATG +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDLKCPP*LSCEQM
Trigger: CATTTGTTCACAACTTAATCACGGGGGACATTTCAG...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGATGGCATCATATTACTaGCTTGACACAGAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRMASYY*LDTEVA
Trigger: AGCAACCTCTGTGTCAAGTCAGTAATATGATGCCAT...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGGAACTACCTTCTTACTaGCTTCTCAATTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQELPSY*LLNFSS
Trigger: GCTGCTGAAATTGAGAAGTCAGTAAGAAGGTAGTTC...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATCCAGCTAAGTGTGTCTaGCTAGTTCTCCAGACATCA +
Preference number: 4 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYPAKCV*LVLQTS
Trigger: TGATGTCTGGAGAACTAGTCAGACACACTTAGCTGG...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTCTGCAGGGTATGGTCTaGTCCACATTTACTGGTGTT +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLILQGMV*STFTGV
Trigger: AACACCAGTAAATGTGGATCAGACCATACCCTGCAG...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTTGTATGATGAAGGCCTaGAAGGCAGCAATGAAATCA +
Preference number: 4 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLCMMKA*KAAMKS
Trigger: TGATTTCATTGCTGCCTTTCAGGCCTTCATCATACA...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAAAGTGTCCAATCTTTTaGGCCTCCTCCTTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SGAYLSMQKTTRTATCFQKCPIF*ASSFCG
Trigger: TCCACAAAAGGAGGAGGCTCAAAAGATTGGACACTT...TTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTAAATACACACGTCAGTaGCTTCCGTACAATAAATAC +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQAKYTRQ*LPYNKY
Trigger: GTATTTATTGTACGGAAGTCACTGACGTGTGTATTT...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261491.9
CDS-3UTR TCA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCAAATACACACGTCAGTaGCTTCCGTACAATAAATAC +
Preference number: 4 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIKYTRQ*LPYNKY
Trigger: GTATTTATTGTACGGAAGTCACTGACGTGTGTATTT...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GACCTGTCAGAATTTCCCTCCAGTTCAAGGCTGAATAATGTCCCATTATTATATCCATTCATCCATCAGTaGACAGTTGGGTTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: DLSEFPSSSRLNNVPLLYPFIHQ*TVGLLP
Trigger: TGGAAGCAACCCAACTGTTCACTGATGGATGAATGG...ATATAATAATGGGACATTATTCAGCCTTGAACTGGAGGGAAATTCTGACAGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611224.1
CDS-3UTR TCA 90 bp GACCTGTCAGAATTTCCCTCCAGTTCAAGGCTGAATAATGTCCCATTATTATATGCAGTAAAGATTCCCTaGCACCTGAAAATGCGACCT +
Preference number: 4 (lower is better)
Translates to: DLSEFPSSSRLNNVPLLYAVKIP*HLKMRP
Trigger: AGGTCGCATTTTCAGGTGTCAGGGAATCTTTACTGC...ATATAATAATGGGACATTATTCAGCCTTGAACTGGAGGGAAATTCTGACAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611224.1
CDS-3UTR GCA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGAGCATTTTTCGTGCTTaGTTCAGCTACACTAGCATC +
Preference number: 4 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQSIFRA*FSYTSI
Trigger: GATGCTAGTGTAGCTGAAGCAAGCACGAAAAATGCT...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR GCA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATCAGAAAGACTCTCTCTaGACACGTTACAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYQKDSL*TRYRRW
Trigger: CCACCTTCTGTAACGTGTGCAGAGAGAGTCTTTCTG...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTAATTTGTTGCTCTCACTaGACATCTTTTGTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLICCSH*TSFVSL
Trigger: AAGGCTCACAAAAGATGTGCAGTGAGAGCAACAAAT...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACGATGGTATAAATCTTTaGAGGCAGTGTGTACCATTG +
Preference number: 4 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHDGINL*RQCVPL
Trigger: CAATGGTACACACTGCCTGCAAAGATTTATACCATC...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGGATGGTATAAATCTTTaGAGGCAGTGTGTACCATTG +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQDGINL*RQCVPL
Trigger: CAATGGTACACACTGCCTGCAAAGATTTATACCATC...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGACAGAACGAAAATGTTaGTCTACAGAAACCATCGGA +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQTERKC*STETIG
Trigger: TCCGATGGTTTCTGTAGAGCAACATTTTCGTTCTGT...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACAATAAAATTCTTCAGATaGTTCTGGAGGTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTIKFFR*FWRSWK
Trigger: CTTCCAGGACCTCCAGAAGCATCTGAAGAATTTTAT...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTAATAAAATTCTTCAGATaGTTCTGGAGGTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLIKFFR*FWRSWK
Trigger: CTTCCAGGACCTCCAGAAGCATCTGAAGAATTTTAT...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCGCTTCCTCAATGACTTaGCTCACTGCTTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: TSLPRNSTNMITPPTVECASSMT*LTAFFK
Trigger: TTTAAAGAAAGCAGTGAGGCAAGTCATTGAGGAAGC...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR GCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAAAACACGGCTATGCCTTaGAAGCTGGGAAGAGGAATA +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKNTAMP*KLGRGI
Trigger: TATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTT...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGTGTTCAACACGGCTATaGCTTGCAAGCTGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLCSTRL*LASWEE
Trigger: CTCTTCCCAGCTTGCAAGGCATAGCCGTGTTGAACA...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp TCCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATGTCATCAAAGGATGGTaGAGCAAATATATCATCCTC +
Preference number: 4 (lower is better)
Translates to: SKLFNSLENSLHMTHFRYVIKGW*SKYIIL
Trigger: GAGGATGATATATTTGCTGCACCATCCTTTGATGAC...ATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626247.2
ENST00000627777.2
CDS-3UTR GCA 90 bp TCTTTGTACTCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGTGTGCTCTGTTTTTGTaGACAATTTTGATAATCCCT +
Preference number: 4 (lower is better)
Translates to: SLYSPKLSRSSQAATSSVCALFL*TILIIP
Trigger: AGGGATTATCAAAATTGTGCACAAAAACAGAGCACA...CACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR GCA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCCCAGAATCACACTTCTaGTTATCTTCCCAAGATTTC +
Preference number: 4 (lower is better)
Translates to: TSLPRNSTNMITPPTVECPESHF*LSSQDF
Trigger: GAAATCTTGGGAAGATAAGCAGAAGTGTGATTCTGG...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR GCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTGCTGCAAAGGAACCCTaGCAACTAGCAAAGATTCTG +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLIAAKEP*QLAKIL
Trigger: CAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGC...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp TCCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATCTATTCGAAATACGGTaGTTCTGTTGTTCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: SKLFNSLENSLHMTHFRYLFEIR*FCCSFW
Trigger: CCAAAAGGAACAACAGAAGCACCGTATTTCGAATAG...ATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626247.2
ENST00000627777.2
CDS-3UTR GCA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCCTATTCGAAATACGGTaGTTCTGTTGTTCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: TSLPRNSTNMITPPTVECLFEIR*FCCSFW
Trigger: CCAAAAGGAACAACAGAAGCACCGTATTTCGAATAG...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR GCA 90 bp AGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAATCAAGCCACAGAGGTaGTTCAGTGGTGCTTACTTA +
Preference number: 4 (lower is better)
Translates to: SGAYLSMQKTTRTATCFQIKPQR*FSGAYL
Trigger: TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGAT...TTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCAACCACATATTGTTATaGAGTTGCACAGTAGGAACA +
Preference number: 4 (lower is better)
Translates to: LPRNSTNMITPPTVECSFNHILL*SCTVGT
Trigger: TGTTCCTACTGTGCAACTGCATAACAATATGTGGTT...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000379274.6
CDS-3UTR GCA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCCAGGCAGGAACATCGTaGATTAAGATTTGCATTCAT +
Preference number: 4 (lower is better)
Translates to: TSLPRNSTNMITPPTVECQAGTS*IKICIH
Trigger: ATGAATGCAAATCTTAATGCACGATGTTCCTGCCTG...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261491.9
CDS-3UTR GCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCACCTCCTGTTTGGTTaGACAGGAAAGTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYHLLFG*TGKCSQ
Trigger: CTGTGAACACTTTCCTGTGCAACCAAACAGGAGGTG...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACAAGTCATTTGGGCCCTaGACAGCCATGCATAGACAA +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYKSFGP*TAMHRQ
Trigger: TTGTCTATGCATGGCTGTGCAGGGCCCAAATGACTT...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGATGATCATGGCTCACTaGAGCCTTGAACTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLMIMAH*SLELLV
Trigger: GACCAGGAGTTCAAGGCTGCAGTGAGCCATGATCAT...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAAAAGTCAATCAGGGGATaGCATAGAAGAGACAAGCCC +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKKSIRG*HRRDKP
Trigger: GGGCTTGTCTCTTCTATGGCATCCCCTGATTGACTT...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACGACACAATGAGCCAATaGCAAAGTCAGTTACAGAAC +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDDTMSQ*QSQLQN
Trigger: GTTCTGTAACTGACTTTGGCATTGGCTCATTGTGTC...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTTTTGGGGCAGTGAGATaGAACAGGAGCTCCAAATTA +
Preference number: 4 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLFGAVR*NRSSKL
Trigger: TAATTTGGAGCTCCTGTTGCATCTCACTGCCCCAAA...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACAGACACTGACTCATCTTaGTTAGGAGTTAGTTTGCTA +
Preference number: 4 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTDTDSS*LGVSLL
Trigger: TAGCAAACTAACTCCTAAGCAAGATGAGTCAGTGTC...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTCATGGAGAAAATACCTaGCTAGGGAAGTCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLIHGENT*LGKSGR
Trigger: CCTACCTGACTTCCCTAGGCAGGTATTTTCTCCATG...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTTTGGTTTGCCCAGAGTaGACACATGCTCATGAATGC +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLILVCPE*THAHEC
Trigger: GCATTCATGAGCATGTGTGCACTCTGGGCAAACCAA...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGATGATCTCAAGGCAGTaGCCTTTGGGAAAGATGTCT +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVMISRQ*PLGKMS
Trigger: AGACATCTTTCCCAAAGGGCACTGCCTTGAGATCAT...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CTGCTACGAACATGGTGTAGAACTGCTTCACAATTGTATTGTTTTCGGCTGGGCAGGGTGCTTGTTTATTaGATGAGAGCTAAAACAAGA +
Preference number: 4 (lower is better)
Translates to: LLRTWCRTASQLYCFRLGRVLVY*MRAKTR
Trigger: TCTTGTTTTAGCTCTCATGCAATAAACAAGCACCCT...GCCCAGCCGAAAACAATACAATTGTGAAGCAGTTCTACACCATGTTCGTAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611224.1
CDS-3UTR GCA 90 bp TCTTTGTACTCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGTTTCTACATGCTCAATaGATTACAAAGCAAAGGTTG +
Preference number: 4 (lower is better)
Translates to: SLYSPKLSRSSQAATSSVFLHAQ*ITKQRL
Trigger: CAACCTTTGCTTTGTAATGCATTGAGCATGTAGAAA...CACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CCA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCACCTTTGGAAAGAACTaGTTTGCTTCAATAGCTGTC +
Preference number: 4 (lower is better)
Translates to: TSLPRNSTNMITPPTVECTFGKN*FASIAV
Trigger: GACAGCTATTGAAGCAAACCAGTTCTTTCCAAAGGT...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000379274.6
CDS-3UTR CCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACACGCTTTTTCCACCTTTaGAAAGAACTGGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTRFFHL*KELVCF
Trigger: GAAGCAAACCAGTTCTTTCCAAAGGTGGAAAAAGCG...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCAGTGGACATATTGGATaGTATAAATCTTTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LPRNSTNMITPPTVECSFSGHIG*YKSLQA
Trigger: TGCCTGCAAAGATTTATACCATCCAATATGTCCACT...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTCCAACATTTTGGTACTaGCTCGTTCCAGTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSPTFWY*LVPVSL
Trigger: TAGAGAAACTGGAACGAGCCAGTACCAAAATGTTGG...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATAGAGGACTGATTAGCTaGTTCACAGGGGTGAACTGT +
Preference number: 4 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYRGLIS*FTGVNC
Trigger: ACAGTTCACCCCTGTGAACCAGCTAATCAGTCCTCT...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTATGCCTTGCAAGCTaGGAAGAGGAATATACTGCC +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYLCLAS*EEEYTA
Trigger: GGCAGTATATTCCTCTTCCCAGCTTGCAAGGCATAG...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATCTATGCCTTGCAAGCTaGGAAGAGGAATATACTGCC +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYLCLAS*EEEYTA
Trigger: GGCAGTATATTCCTCTTCCCAGCTTGCAAGGCATAG...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTCTTGTCATCAAAGGATaGTGCAGCAAATATATCATC +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQALVIKG*CSKYII
Trigger: GATGATATATTTGCTGCACCATCCTTTGATGACAAG...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CCA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCTGTTGCCAAGTCAATaGCGTGATGGATGTACAAAT +
Preference number: 4 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQLLPSQ*RDGCTN
Trigger: ATTTGTACATCCATCACGCCATTGACTTGGCAACAG...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACACTGTTGCCAAGTCAATaGCGTGATGGATGTACAAAT +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTLLPSQ*RDGCTN
Trigger: ATTTGTACATCCATCACGCCATTGACTTGGCAACAG...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGCAGAGTGTAAGGCATTaGATACTCGCTCTTCATGTG +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVQSVRH*ILALHV
Trigger: CACATGAAGAGCGAGTATCCAATGCCTTACACTCTG...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGACAGAGGTGCTTCAGTaGTGCTTACTTATCTATGCA +
Preference number: 4 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQTEVLQ*CLLIYA
Trigger: TGCATAGATAAGTAAGCACCACTGAAGCACCTCTGT...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAACAGAGGTGCTTCAGTaGTGCTTACTTATCTATGCA +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTTEVLQ*CLLIYA
Trigger: TGCATAGATAAGTAAGCACCACTGAAGCACCTCTGT...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATGTCAGTGAAGTCATTTaGGCCCTGCACAGCCATGCA +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYVSEVI*ALHSHA
Trigger: TGCATGGCTGTGCAGGGCCCAAATGACTTCACTGAC...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACATGTGATCTGATCCCATaGAGAAGCTCTTCCCTACTT +
Preference number: 4 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTCDLIP*RSSSLL
Trigger: AAGTAGGGAAGAGCTTCTCCATGGGATCAGATCACA...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTCAAAAATACAACCACTaGGTAGGTAGGGCTCATCTA +
Preference number: 4 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSQKYNH*VGRAHL
Trigger: TAGATGAGCCCTACCTACCCAGTGGTTGTATTTTTG...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGTCCTGTGTCCCACACTaGCTACAAAAATACAACCAC +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVSCVPH*LQKYNH
Trigger: GTGGTTGTATTTTTGTAGCCAGTGTGGGACACAGGA...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACAGGCCTCCTATTACAATaGCATCATATTACTGACTTG +
Preference number: 4 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTGLLLQ*HHITDL
Trigger: CAAGTCAGTAATATGATGCCATTGTAATAGGAGGCC...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGAACAGCGCTCAGCCATaGTTCAAGATTCCTAATGTT +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRNSAQP*FKIPNV
Trigger: AACATTAGGAATCTTGAACCATGGCTGAGCGCTGTT...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACATTGGTCTGCAGGGTATaGTCTGATCCACATTTACTG +
Preference number: 4 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTLVCRV*SDPHLL
Trigger: CAGTAAATGTGGATCAGACCATACCCTGCAGACCAA...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGTTAAGAAAATCTCCTTaGTCTGCAGGGTATGGTCTG +
Preference number: 4 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQLRKSP*SAGYGL
Trigger: CAGACCATACCCTGCAGACCAAGGAGATTTTCTTAA...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTGAGAGACCACTCTGGTaGGAAAGAGTGAAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLERPLW*ERVKVE
Trigger: TTCTACTTTCACTCTTTCCCACCAGAGTGGTCTCTC...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTAGATCTATCAGTCACTaGGATCACATGTACGGCTGT +
Preference number: 4 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLRSISH*DHMYGC
Trigger: ACAGCCGTACATGTGATCCCAGTGACTGATAGATCT...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 72 bp CAGGGTAAAGTGTCCAATCTTTTGAGCCTCCTCCTTTaGTGGACCTTGTACAAAGTCAAACAAAGAGTAAAG +
Preference number: 4 (lower is better)
Translates to: QGKVSNLLSLLL*WTLYKVKQRVK
Trigger: CTTTACTCTTTGTTTGACTTTGTACAAGGTCCACAAAAGGAGGAGGCTCAAAAGATTGGACACTTTACCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 72 bp TTAAACTTTGGCACTATTCGAAATACGGTGCTTCTGTaGTTCCTTTTGGTGCAATCCATAGGAGGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LNFGTIRNTVLL*FLLVQSIGGSS
Trigger: TGAGGAACCTCCTATGGATTGCACCAAAAGGAACAACAGAAGCACCGTATTTCGAATAGTGCCAAAGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTATCTTTTGTGAGCCTTaGATTTACACACTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLIFCEP*IYTLRR
Trigger: CCTGCGAAGTGTGTAAATTCAAGGCTCACAAAAGAT...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCAACTGCACATCTTTTGTaGGCCTTGAATTTACACACT +
Preference number: 4 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPTAHLL*ALNLHT
Trigger: AGTGTGTAAATTCAAGGCTCACAAAAGATGTGCAGT...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGAGGAACTTTACTCCCTaGTTATCTCCACTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQRNFTP*LSPLLE
Trigger: TTCTAAGAGTGGAGATAATCAGGGAGTAAAGTTCCT...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGATTAAATCAAACACCTaGGCCGGATTTAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRIKSNT*AGFSNC
Trigger: ACAGTTGCTAAATCCGGCTCAGGTGTTTGATTTAAT...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AACTTTGGCACTATTCGAAATACGGTGCTTCTGTTGTTCCTTTTGGTGCAATCCATTAAATCAAACACCTaGGCCGGATTTAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: NFGTIRNTVLLLFLLVQSIKSNT*AGFSNC
Trigger: ACAGTTGCTAAATCCGGCTCAGGTGTTTGATTTAAT...GGATTGCACCAAAAGGAACAACAGAAGCACCGTATTTCGAATAGTGCCAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTGAGCTTATCGATTTCTaGCAAAACCCAACCTACACT +
Preference number: 4 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLELIDF*QNPTYT
Trigger: AGTGTAGGTTGGGTTTTGTCAGAAATCGATAAGCTC...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGAAGATGCGTTGCAACTaGGTCTTCATAAATCGTCAT +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRKMRCN*VFINRH
Trigger: ATGACGATTTATGAAGACTCAGTTGCAACGCATCTT...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCAAAGATGCGTTGCAACTaGGTCTTCATAAATCGTCAT +
Preference number: 4 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPKMRCN*VFINRH
Trigger: ATGACGATTTATGAAGACTCAGTTGCAACGCATCTT...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp ATGAAGATATCTTTGTACTCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTAAGATGCGTTGCAACTaGGTCTTCATAAATCGTCAT +
Preference number: 4 (lower is better)
Translates to: MKISLYSPKLSRSSQAATKMRCN*VFINRH
Trigger: ATGACGATTTATGAAGACTCAGTTGCAACGCATCTT...AGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACAAAGATATCTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR TCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTCCATCACACTCAAGTTaGACCCTTTGTTCTAAATTC +
Preference number: 4 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSPSHSS*TLCSKF
Trigger: GAATTTAGAACAAAGGGTTCAACTTGAGTGTGATGG...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACCCATCACACTCAAGTTaGACCCTTTGTTCTAAATTC +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDPSHSS*TLCSKF
Trigger: GAATTTAGAACAAAGGGTTCAACTTGAGTGTGATGG...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AACCTTTTCCTTTTTAAACTTTGGCACTATTCGAAATACGGTGCTTCTGTTGTTAGAATTCGCTTCACATaGCCCACTTTCGGTATCCCC +
Preference number: 4 (lower is better)
Translates to: NLFLFKLWHYSKYGASVVRIRFT*PTFGIP
Trigger: GGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCT...AACAACAGAAGCACCGTATTTCGAATAGTGCCAAAGTTTAAAAAGGAAAAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATGAAATAGCACCAATATaGTTACACCTCCGACTGTGG +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYEIAPI*LHLRLW
Trigger: CCACAGTCGGAGGTGTAATCATATTGGTGCTATTTC...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTACTAGGAGTTGGAGGTaGTACCAATCTACATTCAAA +
Preference number: 4 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLTRSWR*YQSTFK
Trigger: TTTGAATGTAGATTGGTATCACCTCCAACTCCTAGT...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACGGTTTTCAACATATTTaGCCACTAAGCACTAGGAGT +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDGFQHI*PLSTRS
Trigger: ACTCCTAGTGCTTAGTGGTCAAATATGTTGAAAACC...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCAGGTTTTCAACATATTTaGCCACTAAGCACTAGGAGT +
Preference number: 4 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPGFQHI*PLSTRS
Trigger: ACTCCTAGTGCTTAGTGGTCAAATATGTTGAAAACC...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACACAGCACCCTGCCTCATaGCTTTTTAAACTACTTGAT +
Preference number: 4 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTQHPAS*LFKLLD
Trigger: ATCAAGTAGTTTAAAAAGTCATGAGGCAGGGTGCTG...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGGACTATCAGAGGGACTaGAAAAGGAGACCTCTGACT +
Preference number: 4 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLDYQRD*KRRPLT
Trigger: AGTCAGAGGTCTCCTTTTTCAGTCCCTCTGATAGTC...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGTGCTTAAGCGAGAAATaGAAGGGGTCATTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRCLSEK*KGSFCS
Trigger: ACTACAAAATGACCCCTTTCATTTCTCGCTTAAGCA...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTTGGCAGTACAATCACTaGGATCTCTCTTCAACTAAA +
Preference number: 4 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLWQYNH*DLSSTK
Trigger: TTTAGTTGAAGAGAGATCTCAGTGATTGTACTGCCA...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGGAACTACCTTCTTACTaGCTTCTCAATTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVELPSY*LLNFSS
Trigger: GCTGCTGAAATTGAGAAGTCAGTAAGAAGGTAGTTC...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAAGCAAAAGCACAGGAGTaGAAAATGGTGAGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCEAKAQE*KMVRVC
Trigger: ACAAACCCTCACCATTTTTCACTCCTGTGCTTTTGC...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCACCACACCTGGCCCTaGTATTTAATTTTAGAAATT +
Preference number: 4 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMHHTWP*YLILEI
Trigger: AATTTCTAAAATTAAATATCAGGGCCAGGTGTGGTG...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACCACCACACCTGGCCCTaGTATTTAATTTTAGAAATT +
Preference number: 4 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHHHTWP*YLILEI
Trigger: AATTTCTAAAATTAAATATCAGGGCCAGGTGTGGTG...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAAGAAAAGTCTATCAAGTaGATGAAGGAACAGGGCATT +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQEEKSIK*MKEQGI
Trigger: AATGCCCTGTTCCTTCATTCACTTGATAGACTTTTC...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAGCATTTTTCGTGCTTaGTTCAGCTACACTAGCATC +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVSIFRA*FSYTSI
Trigger: GATGCTAGTGTAGCTGAAGCAAGCACGAAAAATGCT...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR GCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACATTTGTTGCTCTCACTaGACATCTTTTGTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDICCSH*TSFVSL
Trigger: AAGGCTCACAAAAGATGTGCAGTGAGAGCAACAAAT...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAAAACCATCGGAATCGGTaGTGTTTAGTGCAATTGGAG +
Preference number: 4 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCENHRNR*CLVQLE
Trigger: CTCCAATTGCACTAAACAGCACCGATTCCGATGGTT...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACACAGAACGAAAATGTTaGTCTACAGAAACCATCGGA +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDTERKC*STETIG
Trigger: TCCGATGGTTTCTGTAGAGCAACATTTTCGTTCTGT...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAACAGAACGAAAATGTTaGTCTACAGAAACCATCGGA +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTTERKC*STETIG
Trigger: TCCGATGGTTTCTGTAGAGCAACATTTTCGTTCTGT...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGATTCATCTGTTTCTGTaGTGTCATAATCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMIHLFL*CHNQRT
Trigger: AGTCCTCTGATTATGACAGCACAGAAACAGATGAAT...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTCTTGAAACTGCCATTTaGATGCTATCAAATATTGCT +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQALETAI*MLSNIA
Trigger: AGCAATATTTGATAGCATGCAAATGGCAGTTTCAAG...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR GCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATCCCAAGATTTCAGAGTaGTCTCAAAGGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYPKISE*SQRLCP
Trigger: GGGACAGAGCCTTTGAGAGCACTCTGAAATCTTGGG...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACCCAGAATCACACTTCTaGTTATCTTCCCAAGATTTC +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDPESHF*LSSQDF
Trigger: GAAATCTTGGGAAGATAAGCAGAAGTGTGATTCTGG...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACACCAGAATCACACTTCTaGTTATCTTCCCAAGATTTC +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTPESHF*LSSQDF
Trigger: GAAATCTTGGGAAGATAAGCAGAAGTGTGATTCTGG...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AACTTTGGCACTATTCGAAATACGGTGCTTCTGTTGTTCCTTTTGGTGCAATCCCCAGAATCACACTTCTaGTTATCTTCCCAAGATTTC +
Preference number: 4 (lower is better)
Translates to: NFGTIRNTVLLLFLLVQSPESHF*LSSQDF
Trigger: GAAATCTTGGGAAGATAAGCAGAAGTGTGATTCTGG...GGATTGCACCAAAAGGAACAACAGAAGCACCGTATTTCGAATAGTGCCAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR GCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATCGACACCTCTTCTGTTaGCAAGTCAATGGCGTGATG +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYRHLFC*QVNGVM
Trigger: CATCACGCCATTGACTTGGCAACAGAAGAGGTGTCG...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACACAGTGAATTGTGGCTaGGTCACATATCCTAGTAAT +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDTVNCG*VTYPSN
Trigger: ATTACTAGGATATGTGACGCAGCCACAATTCACTGT...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAACAGTGAATTGTGGCTaGGTCACATATCCTAGTAAT +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTTVNCG*VTYPSN
Trigger: ATTACTAGGATATGTGACGCAGCCACAATTCACTGT...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGCTATTCGAAATACGGTaGTTCTGTTGTTCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRLFEIR*FCCSFW
Trigger: CCAAAAGGAACAACAGAAGCACCGTATTTCGAATAG...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAAACAAGAACAGCCACTTaGTTCCAAGGACTTTGTATT +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQETRTAT*FQGLCI
Trigger: AATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGT...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAACAAGAACAGCCACTTaGTTCCAAGGACTTTGTATT +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTTRTAT*FQGLCI
Trigger: AATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGT...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTGTGCTTACTTATCTATaGAGAAAACTACAAGAACAG +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQAVLTYL*RKLQEQ
Trigger: CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000379274.6
CDS-3UTR GCA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCGTGCTTACTTATCTATaGAGAAAACTACAAGAACAG +
Preference number: 4 (lower is better)
Translates to: LPRNSTNMITPPTVECSFVLTYL*RKLQEQ
Trigger: CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000379274.6
CDS-3UTR GCA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTGAGGTGCTTCAGTGGTaGTTACTTATCTATGCAGAA +
Preference number: 4 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLEVLQW*LLIYAE
Trigger: TTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATATCAAGCCACAGAGGTaGTTCAGTGGTGCTTACTTA +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYIKPQR*FSGAYL
Trigger: TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGAT...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGAACCACATATTGTTATaGAGTTGCACAGTAGGAACA +
Preference number: 4 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMNHILL*SCTVGT
Trigger: TGTTCCTACTGTGCAACTGCATAACAATATGTGGTT...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGGCAGGAACATCGTaGATTAAGATTTGCATTCAT +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQEQAGTS*IKICIH
Trigger: ATGAATGCAAATCTTAATGCACGATGTTCCTGCCTG...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTAAGAATTTTCTTAACGTaGACGCCTACTGCTTATGAT +
Preference number: 4 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLRIFLT*TPTAYD
Trigger: ATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCT...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACATGCTATGTGTCCTCATaGATGAGCTATGTCAACAAG +
Preference number: 4 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTCYVSS*MSYVNK
Trigger: CTTGTTGACATAGCTCATGCATGAGGACACATAGCA...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTTCAATGTGTGTGTACTaGTATGTGTCCTCATGCATG +
Preference number: 4 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLSMCVY*YVSSCM
Trigger: CATGCATGAGGACACATAGCAGTACACACACATTGA...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATATACAGCTCACGTGTaGCTTGTGTTTCTATCATAT +
Preference number: 4 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLYTAHV*LVFLSY
Trigger: ATATGATAGAAACACAAGGCACACGTGAGCTGTATA...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAACAACTGCTCTTCCTTaGTGTTTATCTTCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTTTALP*CLSSVG
Trigger: ACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGT...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTTTTTCACAAAACAACTaGTCTTCCTTGCTGTTTATC +
Preference number: 4 (lower is better)
Translates to: RNSTNMITPPTVECSFQAFSQNN*SSLLFI
Trigger: GATAAACAGCAAGGAAGAGCAGTTGTTTTGTGAAAA...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261491.9
CDS-3UTR CCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAAACCTTTGGAAAGAACTaGTTTGCTTCAATAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQETFGKN*FASIAV
Trigger: GACAGCTATTGAAGCAAACCAGTTCTTTCCAAAGGT...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CCA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGAGTGGACATATTGGATaGTATAAATCTTTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMSGHIG*YKSLQA
Trigger: TGCCTGCAAAGATTTATACCATCCAATATGTCCACT...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCTGTCCAACATTTTaGTACTGGCTCGTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLITCPTF*YWLVPV
Trigger: AACTGGAACGAGCCAGTACCAAAATGTTGGACAGGT...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACACCTGTCCAACATTTTaGTACTGGCTCGTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYTCPTF*YWLVPV
Trigger: AACTGGAACGAGCCAGTACCAAAATGTTGGACAGGT...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACACGTCTTTTCTACTTTaGCAACGAAGTCCTTTACAG +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDTSFLL*QRSPLQ
Trigger: CTGTAAAGGACTTCGTTGCCAAAGTAGAAAAGACGT...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGACGTCTTTTCTACTTTaGCAACGAAGTCCTTTACAG +
Preference number: 4 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQTSFLL*QRSPLQ
Trigger: CTGTAAAGGACTTCGTTGCCAAAGTAGAAAAGACGT...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATAATTTTGATAATCCCTaGAGGCTGAACCCACGCTTC +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYNFDNP*RLNPRF
Trigger: GAAGCGTGGGTTCAGCCTCCAGGGATTATCAAAATT...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp AGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAACTGTTGCCAAGTCAATaGCGTGATGGATGTACAAAT +
Preference number: 4 (lower is better)
Translates to: SGAYLSMQKTTRTATCFQLLPSQ*RDGCTN
Trigger: ATTTGTACATCCATCACGCCATTGACTTGGCAACAG...TTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTCAGAGTGTAAGGCATTaGATACTCGCTCTTCATGTG +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLIQSVRH*ILALHV
Trigger: CACATGAAGAGCGAGTATCCAATGCCTTACACTCTG...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATATAGTCAGACATACTTaGTCAGGAATCCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYIVRHT*SGIPQG
Trigger: ACCCTGAGGGATTCCTGACCAAGTATGTCTGACTAT...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAAATAGTCAGACATACTTaGTCAGGAATCCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKIVRHT*SGIPQG
Trigger: ACCCTGAGGGATTCCTGACCAAGTATGTCTGACTAT...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCCAAACTGAACAAACATaGATTGTTAGTGACTTAGAG +
Preference number: 4 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIQTEQT*IVSDLE
Trigger: CTCTAAGTCACTAACAATCCATGTTTGTTCAGTTTG...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGGGAGGCTATTCTATTaGCTAACAATTACTAGTGGA +
Preference number: 4 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLGRLFY*LTITSG
Trigger: TCCACTAGTAATTGTTAGCCAATAGAATAGCCTCCC...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACGGCCTCCTATTACAATaGCATCATATTACTGACTTG +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDGLLLQ*HHITDL
Trigger: CAAGTCAGTAATATGATGCCATTGTAATAGGAGGCC...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATTTGGTCTGCAGGGTATaGTCTGATCCACATTTACTG +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYLVCRV*SDPHLL
Trigger: CAGTAAATGTGGATCAGACCATACCCTGCAGACCAA...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTCTAACCTCACTGTCTaGGAAGTCTATCTTTATATC +
Preference number: 4 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHSNLTV*EVYLYI
Trigger: GATATAAAGATAGACTTCCCAGACAGTGAGGTTAGA...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp AGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAAGCCTCCTCCTTTTGTaGACCTTGTACAAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: SGAYLSMQKTTRTATCFQSLLLL*TLYKVK
Trigger: TTTGACTTTGTACAAGGTCCACAAAAGGAGGAGGCT...TTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGAAAGGCACCGAAAACTaGTCACTTAGTAGTCATAAA +
Preference number: 4 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMKGTEN*SLSSHK
Trigger: TTTATGACTACTAAGTGACCAGTTTTCGGTGCCTTT...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACCAGTTGTGCATCCCTaGGAAATGTTCCACATTAAA +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKPVVHP*EMFHIK
Trigger: TTTAATGTGGAACATTTCTCAGGGATGCACAACTGG...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTATCTTTTGTGAGCCTTaGATTTACACACTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLIIFCEP*IYTLRR
Trigger: CCTGCGAAGTGTGTAAATTCAAGGCTCACAAAAGAT...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTGAGCTTATCGATTTCTaGCAAAACCCAACCTACACT +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLIELIDF*QNPTYT
Trigger: AGTGTAGGTTGGGTTTTGTCAGAAATCGATAAGCTC...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATGGCAACACTCCCAGCTaGCACTGTTTATTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYGNTPS*HCLFKL
Trigger: CAACTTGAATAAACAGTGTCAGCTGGGAGTGTTGCC...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAGATTATTCTGGTATTaGGCACAGGGAGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVRLFWY*AQGGFL
Trigger: AAGAAAACCTCCCTGTGCTCAATACCAGAATAATCT...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACATGACACATTTTTCTaGATATCCATCTACGGAATC +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQEHDTFF*ISIYGI
Trigger: GATTCCGTAGATGGATATTCAGAAAAATGTGTCATG...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGCCATCACACTCAAGTTaGACCCTTTGTTCTAAATTC +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVPSHSS*TLCSKF
Trigger: GAATTTAGAACAAAGGGTTCAACTTGAGTGTGATGG...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATCAGTTTAATGACCCTTaGAACTGCCATTTGCATGCT +
Preference number: 4 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYQFNDP*NCHLHA
Trigger: AGCATGCAAATGGCAGTTTCAAGGGTCATTAAACTG...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATTGCTCCAAAAGACAGTaGATTGTGGCTGCGTCACAT +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYCSKRQ*IVAASH
Trigger: ATGTGACGCAGCCACAATTCACTGTCTTTTGGAGCA...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGGGTTTTCAACATATTTaGCCACTAAGCACTAGGAGT +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVGFQHI*PLSTRS
Trigger: ACTCCTAGTGCTTAGTGGTCAAATATGTTGAAAACC...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACATATATAAATCTCAGTTaGCACCTCAGGGAATTCCTG +
Preference number: 4 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTYINLS*HLREFL
Trigger: CAGGAATTCCCTGAGGTGTCAACTGAGATTTATATA...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAAAAAATTGTCACCACTaGGTCAGTACCCTGTTTATT +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTKNCHH*VSTLFI
Trigger: AATAAACAGGGTACTGACTCAGTGGTGACAATTTTT...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTCAGCACCCTGCCTCATaGCTTTTTAAACTACTTGAT +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLIQHPAS*LFKLLD
Trigger: ATCAAGTAGTTTAAAAAGTCATGAGGCAGGGTGCTG...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACGCTAAAGGAAGATTTTaGTTCGGTAGATCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYAKGRF*FGRSAV
Trigger: CACTGCAGATCTACCGAATCAAAATCTTCCTTTAGC...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAAATTGCTGGAGTTAGCTaGAGAATGAATAGGACACAG +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKIAGVS*RMNRTQ
Trigger: CTGTGTCCTATTCATTCTTCAGCTAACTCCAGCAAT...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGATGTGTCCTCATGCATaGGCTATGTCAACAAGGACA +
Preference number: 4 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLMCPHA*AMSTRT
Trigger: TGTCCTTGTTGACATAGCTCATGCATGAGGACACAT...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCATGGGGGTCAAGAATATaGAATATTATTCTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPWGSRI*NIILQA
Trigger: TGCCTGAAGAATAATATTTCATATTCTTGACCCCCA...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACATATCCATAGAACATaGAAGTCCACTATGTTGACA +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQEHIHRT*KSTMLT
Trigger: TGTCAACATAGTGGACTTTCATGTTCTATGGATATG...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTCATATCCATAGAACATaGAAGTCCACTATGTTGACA +
Preference number: 4 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLHIHRT*KSTMLT
Trigger: TGTCAACATAGTGGACTTTCATGTTCTATGGATATG...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAAATGGCATCATATTACTaGCTTGACACAGAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCEMASYY*LDTEVA
Trigger: AGCAACCTCTGTGTCAAGTCAGTAATATGATGCCAT...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACATTAACAGTCTCAGTCTaGGTTACTCTGTTAAACTTC +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTLTVSV*VTLLNF
Trigger: GAAGTTTAACAGAGTAACTCAGACTGAGACTGTTAA...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTTGTATGATGAAGGCCTaGAAGGCAGCAATGAAATCA +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLICMMKA*KAAMKS
Trigger: TGATTTCATTGCTGCCTTTCAGGCCTTCATCATACA...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAATTCATCTATGGCATGTaGTTATGCCAAGGCACTAAG +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKFIYGM*LCQGTK
Trigger: CTTAGTGCCTTGGCATAATCACATGCCATAGATGAA...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAATGGAAAGAACTGGTTTaGTTCAATAGCTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKWKELV*FNSCPS
Trigger: AGAGGGACAGCTATTGAAGCAAACCAGTTCTTTCCA...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR GCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACAGCATTTTTCGTGCTTaGTTCAGCTACACTAGCATC +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYSIFRA*FSYTSI
Trigger: GATGCTAGTGTAGCTGAAGCAAGCACGAAAAATGCT...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR GCA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTATTTGTTGCTCTCACTaGACATCTTTTGTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLICCSH*TSFVSL
Trigger: AAGGCTCACAAAAGATGTGCAGTGAGAGCAACAAAT...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATGTAGACGGAGAACACTaGCACATGTTTTGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYVDGEH*HMFCRR
Trigger: TCTGCGACAAAACATGTGGCAGTGTTCTCCGTCTAC...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGATGGTATAAATCTTTaGAGGCAGTGTGTACCATTG +
Preference number: 4 (lower is better)
Translates to: SGAYLSMQKTTRTATCFQDGINL*RQCVPL
Trigger: CAATGGTACACACTGCCTGCAAAGATTTATACCATC...TTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CTTTGTTCTAAATTCTTGTACGATCTCTGTAATAACTCCCGGGTTCCAAGGACTATAAAATTCTTCAGATaGTTCTGGAGGTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LCSKFLYDLCNNSRVPRTIKFFR*FWRSWK
Trigger: CTTCCAGGACCTCCAGAAGCATCTGAAGAATTTTAT...AGTCCTTGGAACCCGGGAGTTATTACAGAGATCGTACAAGAATTTAGAACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR GCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGAGAAGATATGACCACTaGATGTTCATCAGAATTGAG +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRRRYDH*MFIRIE
Trigger: CTCAATTCTGATGAACATGCAGTGGTCATATCTTCT...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGAGAAGATATGACCACTaGATGTTCATCAGAATTGAG +
Preference number: 4 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQRRYDH*MFIRIE
Trigger: CTCAATTCTGATGAACATGCAGTGGTCATATCTTCT...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AACTTTGGCACTATTCGAAATACGGTGCTTCTGTTGTTCCTTTTGGTGCAATCCAGAAGATATGACCACTaGATGTTCATCAGAATTGAG +
Preference number: 4 (lower is better)
Translates to: NFGTIRNTVLLLFLLVQSRRYDH*MFIRIE
Trigger: CTCAATTCTGATGAACATGCAGTGGTCATATCTTCT...GGATTGCACCAAAAGGAACAACAGAAGCACCGTATTTCGAATAGTGCCAAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR GCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAATTCATCTGTTTCTGTaGTGTCATAATCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTIHLFL*CHNQRT
Trigger: AGTCCTCTGATTATGACAGCACAGAAACAGATGAAT...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAAATTCATCTGTTTCTGTaGTGTCATAATCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQEIHLFL*CHNQRT
Trigger: AGTCCTCTGATTATGACAGCACAGAAACAGATGAAT...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACAGTCATCAAAGGATGGTaGAGCAAATATATCATCCTC +
Preference number: 4 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTVIKGW*SKYIIL
Trigger: GAGGATGATATATTTGCTGCACCATCCTTTGATGAC...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCCTTGAAACTGCCATTTaGATGCTATCAAATATTGCT +
Preference number: 4 (lower is better)
Translates to: TSLPRNSTNMITPPTVECLETAI*MLSNIA
Trigger: AGCAATATTTGATAGCATGCAAATGGCAGTTTCAAG...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR GCA 90 bp AATGGCGTGATGGATGTACAAATGGGTTCGGAGAACTGGTTTACCAGAATCACACTTGAAACTGCCATTTaGATGCTATCAAATATTGCT +
Preference number: 4 (lower is better)
Translates to: NGVMDVQMGSENWFTRITLETAI*MLSNIA
Trigger: AGCAATATTTGATAGCATGCAAATGGCAGTTTCAAG...TGTGATTCTGGTAAACCAGTTCTCCGAACCCATTTGTACATCCATCACGCCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR GCA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATGTGCTCTGTTTTTGTaGACAATTTTGATAATCCCT +
Preference number: 4 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLCALFL*TILIIP
Trigger: AGGGATTATCAAAATTGTGCACAAAAACAGAGCACA...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGTGTGCTCTGTTTTTGTaGACAATTTTGATAATCCCT +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQCALFL*TILIIP
Trigger: AGGGATTATCAAAATTGTGCACAAAAACAGAGCACA...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAGAATCACACTTCTaGTTATCTTCCCAAGATTTC +
Preference number: 4 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLPESHF*LSSQDF
Trigger: GAAATCTTGGGAAGATAAGCAGAAGTGTGATTCTGG...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATGAGGTGCTTCAGTGGTaGTTACTTATCTATGCAGAA +
Preference number: 4 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYEVLQW*LLIYAE
Trigger: TTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGATATTGTTATGCAGTTaGACAGTAGGAACATTCCAT +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQILLCS*TVGTFH
Trigger: ATGGAATGTTCCTACTGTGCAACTGCATAACAATAT...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACATATTGTTATGCAGTTaGACAGTAGGAACATTCCAT +
Preference number: 4 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHILLCS*TVGTFH
Trigger: ATGGAATGTTCCTACTGTGCAACTGCATAACAATAT...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACAGAATTTTCTTAACGTaGACGCCTACTGCTTATGAT +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDRIFLT*TPTAYD
Trigger: ATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCT...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTAAAATCTAGCAAAGCATaGCTTTTTAGAGGGCTTAAA +
Preference number: 4 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLKSSKA*LFRGLK
Trigger: TTTAAGCCCTCTAAAAAGGCATGCTTTGCTAGATTT...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCATATACAGCTCACGTGTaGCTTGTGTTTCTATCATAT +
Preference number: 4 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPYTAHV*LVFLSY
Trigger: ATATGATAGAAACACAAGGCACACGTGAGCTGTATA...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATTGTTTTCTGGGGGTGTaGTCAGCACACTATACAGCT +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYCFLGV*SAHYTA
Trigger: AGCTGTATAGTGTGCTGAGCACACCCCCAGAAAACA...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGAAAATCTCCTTGGTCTaGAGGGTATGGTCTGATCCA +
Preference number: 4 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLKISLV*RVWSDP
Trigger: TGGATCAGACCATACCCTGCAGACCAAGGAGATTTT...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGTATCTTCTGTTGGTTTaGCCAGAGTGCACACATGCT +
Preference number: 4 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLYLLLV*PECTHA
Trigger: AGCATGTGTGCACTCTGGGCAAACCAACAGAAGATA...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGATGAAGGAACCCTATTaGCTAACCATCCATAAATAT +
Preference number: 4 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQMKEPY*LTIHKY
Trigger: ATATTTATGGATGGTTAGGCAATAGGGTTCCTTCAT...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGATGATCTCAAGGCAGTaGCCTTTGGGAAAGATGTCT +
Preference number: 4 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLMISRQ*PLGKMS
Trigger: AGACATCTTTCCCAAAGGGCACTGCCTTGAGATCAT...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATCGCTTTTTCCACCTTTaGAAAGAACTGGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYRFFHL*KELVCF
Trigger: GAAGCAAACCAGTTCTTTCCAAAGGTGGAAAAAGCG...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACGCTTTTTCCACCTTTaGAAAGAACTGGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKRFFHL*KELVCF
Trigger: GAAGCAAACCAGTTCTTTCCAAAGGTGGAAAAAGCG...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CCA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCAAGTGGACATATTGGATaGTATAAATCTTTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPSGHIG*YKSLQA
Trigger: TGCCTGCAAAGATTTATACCATCCAATATGTCCACT...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATCCAACATTTTGGTACTaGCTCGTTCCAGTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYPTFWY*LVPVSL
Trigger: TAGAGAAACTGGAACGAGCCAGTACCAAAATGTTGG...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCCAACATTTTGGTACTaGCTCGTTCCAGTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYPTFWY*LVPVSL
Trigger: TAGAGAAACTGGAACGAGCCAGTACCAAAATGTTGG...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTCTTGTCATCAAAGGATaGTGCAGCAAATATATCATC +
Preference number: 4 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLLVIKG*CSKYII
Trigger: GATGATATATTTGCTGCACCATCCTTTGATGACAAG...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGAATTTTGATAATCCCTaGAGGCTGAACCCACGCTTC +
Preference number: 4 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLNFDNP*RLNPRF
Trigger: GAAGCGTGGGTTCAGCCTCCAGGGATTATCAAAATT...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATATGGGTTCGGAGAACTaGTTTACCAGAATCACACTT +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYMGSEN*FTRITL
Trigger: AAGTGTGATTCTGGTAAACCAGTTCTCCGAACCCAT...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTCTGTTGCCAAGTCAATaGCGTGATGGATGTACAAAT +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLILLPSQ*RDGCTN
Trigger: ATTTGTACATCCATCACGCCATTGACTTGGCAACAG...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAAACAGAGGTGCTTCAGTaGTGCTTACTTATCTATGCA +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKTEVLQ*CLLIYA
Trigger: TGCATAGATAAGTAAGCACCACTGAAGCACCTCTGT...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAAAGATCTAGACATTCATaGGTCATTTCTTGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQERSRHS*VISCQQ
Trigger: TTGCTGACAAGAAATGACCCATGAATGTCTAGATCT...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACATGAATAGGACACAGTaGATGAAGGAACAAGCTATT +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDMNRTQ*MKEQAI
Trigger: AATAGCTTGTTCCTTCATCCACTGTGTCCTATTCAT...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAAATGAATAGGACACAGTaGATGAAGGAACAAGCTATT +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQEMNRTQ*MKEQAI
Trigger: AATAGCTTGTTCCTTCATCCACTGTGTCCTATTCAT...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGTGTATTAGTGCCTCATaGCACACAAGTACTAGTAAT +
Preference number: 4 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQCISAS*HTSTSN
Trigger: ATTACTAGTACTTGTGTGCCATGAGGCACTAATACA...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTTGTATTAGTGCCTCATaGCACACAAGTACTAGTAAT +
Preference number: 4 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSCISAS*HTSTSN
Trigger: ATTACTAGTACTTGTGTGCCATGAGGCACTAATACA...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATAGCCTCCTCCTTTTGTaGACCTTGTACAAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYSLLLL*TLYKVK
Trigger: TTTGACTTTGTACAAGGTCCACAAAAGGAGGAGGCT...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGAAAGGCACCGAAAACTaGTCACTTAGTAGTCATAAA +
Preference number: 4 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRKGTEN*SLSSHK
Trigger: TTTATGACTACTAAGTGACCAGTTTTCGGTGCCTTT...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 72 bp GTGAGTCTGGGTTATCTGTCAGTATATAAATCTCAGTaGACACCTCAGGGAATTCCTGGATATCAACACTTT +
Preference number: 4 (lower is better)
Translates to: VSLGYLSVYKSQ*TPQGIPGYQHF
Trigger: AAAGTGTTGATATCCAGGAATTCCCTGAGGTGTCAACTGAGATTTATATACTGACAGATAACCCAGACTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 72 bp AGCGCTCAGCCATGGTTCAAGATTCCTAATGTTCATTaGAATGTCATATTGGCAGTACAATCACTGAGATCT +
Preference number: 4 (lower is better)
Translates to: SAQPWFKIPNVH*NVILAVQSLRS
Trigger: AGATCTCAGTGATTGTACTGCCAATATGACATTCAAATGAACATTAGGAATCTTGAACCATGGCTGAGCGCT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 72 bp TTGGCAGAAGATATGACCACTGCATGTTCATCAGAATaGAGGATTTTTGTAAGATGCGTTGCAACTGAGTCT +
Preference number: 4 (lower is better)
Translates to: LAEDMTTACSSE*RIFVRCVATES
Trigger: AGACTCAGTTGCAACGCATCTTACAAAAATCCTCAATTCTGATGAACATGCAGTGGTCATATCTTCTGCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626247.2
3UTR CAA 72 bp AGCAAAGATTCTGTTTCATTATACAGCGCCTTCACATaGATGGCTATTTCAGTGGCAGTGTCTCTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: SKDSVSLYSAFT*MAISVAVSLVR
Trigger: TCTTACAAGAGACACTGCCACTGAAATAGCCATCAATGTGAAGGCGCTGTATAATGAAACAGAATCTTTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGAGCTACACTAGCATCTaGGAGGTCAACTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLSYTSI*EVNFIK
Trigger: TTTGATGAAGTTGACCTCTCAGATGCTAGTGTAGCT...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACACTGCACATCTTTTGTaGGCCTTGAATTTACACACT +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYTAHLL*ALNLHT
Trigger: AGTGTGTAAATTCAAGGCTCACAAAAGATGTGCAGT...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAAAGGAACTTTACTCCCTaGTTATCTCCACTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKRNFTP*LSPLLE
Trigger: TTCTAAGAGTGGAGATAATCAGGGAGTAAAGTTCCT...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACAGGAACTTTACTCCCTaGTTATCTCCACTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYRNFTP*LSPLLE
Trigger: TTCTAAGAGTGGAGATAATCAGGGAGTAAAGTTCCT...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTATTAAATCAAACACCTaGGCCGGATTTAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLIIKSNT*AGFSNC
Trigger: ACAGTTGCTAAATCCGGCTCAGGTGTTTGATTTAAT...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGGAGCTTATCGATTTCTaGCAAAACCCAACCTACACT +
Preference number: 4 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLELIDF*QNPTYT
Trigger: AGTGTAGGTTGGGTTTTGTCAGAAATCGATAAGCTC...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AACCTTTTCCTTTTTAAACTTTGGCACTATTCGAAATACGGTGCTTCTGTTGTTTCTTGGCAGAAGATATaGCCACTGCATGTTCATCAG +
Preference number: 4 (lower is better)
Translates to: NLFLFKLWHYSKYGASVVSWQKI*PLHVHQ
Trigger: CTGATGAACATGCAGTGGTCATATCTTCTGCCAAGA...AACAACAGAAGCACCGTATTTCGAATAGTGCCAAAGTTTAAAAAGGAAAAGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATAGATTATTCTGGTATTaGGCACAGGGAGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYRLFWY*AQGGFL
Trigger: AAGAAAACCTCCCTGTGCTCAATACCAGAATAATCT...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CCAACTAGCAAAGATTCTGTTTCATTATACAGCGCCTTCACATTGATGGCTATTAGATTATTCTGGTATTaGGCACAGGGAGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: PTSKDSVSLYSAFTLMAIRLFWY*AQGGFL
Trigger: AAGAAAACCTCCCTGTGCTCAATACCAGAATAATCT...AATAGCCATCAATGTGAAGGCGCTGTATAATGAAACAGAATCTTTGCTAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR TCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGCATGACACATTTTTCTaGATATCCATCTACGGAATC +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVHDTFF*ISIYGI
Trigger: GATTCCGTAGATGGATATTCAGAAAAATGTGTCATG...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACCATCACACTCAAGTTaGACCCTTTGTTCTAAATTC +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKPSHSS*TLCSKF
Trigger: GAATTTAGAACAAAGGGTTCAACTTGAGTGTGATGG...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATGAAATAGCACCAATATaGTTACACCTCCGACTGTGG +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYEIAPI*LHLRLW
Trigger: CCACAGTCGGAGGTGTAATCATATTGGTGCTATTTC...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACACTAGGAGTTGGAGGTaGTACCAATCTACATTCAAA +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYTRSWR*YQSTFK
Trigger: TTTGAATGTAGATTGGTATCACCTCCAACTCCTAGT...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAATATATAAATCTCAGTTaGCACCTCAGGGAATTCCTG +
Preference number: 4 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCEYINLS*HLREFL
Trigger: CAGGAATTCCCTGAGGTGTCAACTGAGATTTATATA...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAAGAATTTCAGCAACCATaGTTATATTGGGCATTGGGA +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKEFQQP*LYWALG
Trigger: TCCCAATGCCCAATATAATCATGGTTGCTGAAATTC...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATGAATTTCAGCAACCATaGTTATATTGGGCATTGGGA +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYEFQQP*LYWALG
Trigger: TCCCAATGCCCAATATAATCATGGTTGCTGAAATTC...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTTTAACAGTCTCAGTCTaGGTTACTCTGTTAAACTTC +
Preference number: 4 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLLTVSV*VTLLNF
Trigger: GAAGTTTAACAGAGTAACTCAGACTGAGACTGTTAA...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATTGGCAGTACAATCACTaGGATCTCTCTTCAACTAAA +
Preference number: 4 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYWQYNH*DLSSTK
Trigger: TTTAGTTGAAGAGAGATCTCAGTGATTGTACTGCCA...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGAGTCTATCAAGTGAATaGAGGAACAGGGCATTTCAG +
Preference number: 4 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLSLSSE*RNRAFQ
Trigger: CTGAAATGCCCTGTTCCTTCATTCACTTGATAGACT...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACGAAAAGTCTATCAAGTaGATGAAGGAACAGGGCATT +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYEKSIK*MKEQGI
Trigger: AATGCCCTGTTCCTTCATTCACTTGATAGACTTTTC...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATTTCAAATGGAGCCTCTaGAGTATACCAGAAAGCATT +
Preference number: 4 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYFKWSL*SIPESI
Trigger: AATGCTTTCTGGTATACTTCAGAGGCTCCATTTGAA...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp ATAACGCTGCTACGAACATGGTGTAGAACTGCTTCACAATTGTATTGTTTTCGGTGCTTGTTTATTGCATaGGAGCTAAAACAAGAAGAC +
Preference number: 4 (lower is better)
Translates to: ITLLRTWCRTASQLYCFRCLFIA*ELKQED
Trigger: GTCTTCTTGTTTTAGCTCTCATGCAATAAACAAGCA...CCGAAAACAATACAATTGTGAAGCAGTTCTACACCATGTTCGTAGCAGCGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611224.1
CDS-3UTR GCA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAAATTTGTTGCTCTCACTaGACATCTTTTGTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCEICCSH*TSFVSL
Trigger: AAGGCTCACAAAAGATGTGCAGTGAGAGCAACAAAT...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACAGAACGAAAATGTTaGTCTACAGAAACCATCGGA +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLITERKC*STETIG
Trigger: TCCGATGGTTTCTGTAGAGCAACATTTTCGTTCTGT...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATGCTTCCTCAATGACTTaGCTCACTGCTTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYASSMT*LTAFFK
Trigger: TTTAAAGAAAGCAGTGAGGCAAGTCATTGAGGAAGC...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAAGCTTCCTCAATGACTTaGCTCACTGCTTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCEASSMT*LTAFFK
Trigger: TTTAAAGAAAGCAGTGAGGCAAGTCATTGAGGAAGC...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACGTCATCAAAGGATGGTaGAGCAAATATATCATCCTC +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYVIKGW*SKYIIL
Trigger: GAGGATGATATATTTGCTGCACCATCCTTTGATGAC...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAAGTCATCAAAGGATGGTaGAGCAAATATATCATCCTC +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKVIKGW*SKYIIL
Trigger: GAGGATGATATATTTGCTGCACCATCCTTTGATGAC...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACCTTGAAACTGCCATTTaGATGCTATCAAATATTGCT +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDLETAI*MLSNIA
Trigger: AGCAATATTTGATAGCATGCAAATGGCAGTTTCAAG...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCTTGAAACTGCCATTTaGATGCTATCAAATATTGCT +
Preference number: 4 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQLETAI*MLSNIA
Trigger: AGCAATATTTGATAGCATGCAAATGGCAGTTTCAAG...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp TCAATGTTTGCCAGTAACATTTTGTTGATAATCGAACTCCCAGCAATTGAGGCAACAGTGAATTGTGGCTaGGTCACATATCCTAGTAAT +
Preference number: 4 (lower is better)
Translates to: SMFASNILLIIELPAIEATVNCG*VTYPSN
Trigger: ATTACTAGGATATGTGACGCAGCCACAATTCACTGT...TGCCTCAATTGCTGGGAGTTCGATTATCAACAAAATGTTACTGGCAAACATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR GCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTATTCGAAATACGGTaGTTCTGTTGTTCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYLFEIR*FCCSFW
Trigger: CCAAAAGGAACAACAGAAGCACCGTATTTCGAATAG...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATCTATTCGAAATACGGTaGTTCTGTTGTTCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYLFEIR*FCCSFW
Trigger: CCAAAAGGAACAACAGAAGCACCGTATTTCGAATAG...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACAAATGATCTGCACCAGTaGTGTCCAATAGAATTTTTG +
Preference number: 4 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTNDLHQ*CPIEFL
Trigger: CAAAAATTCTATTGGACAGCACTGGTGCAGATCATT...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTAAATCTAGCAAAGCATaGCTTTTTAGAGGGCTTAAA +
Preference number: 4 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSKSSKA*LFRGLK
Trigger: TTTAAGCCCTCTAAAAAGGCATGCTTTGCTAGATTT...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACGTCTGCCAAAAATCCTaGAAACTAAAATACATCTTG +
Preference number: 4 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDVCQKS*KLKYIL
Trigger: CAAGATGTATTTTAGTTTGCAGGATTTTTGGCAGAC...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATGACACTGACTCATCTTaGTTAGGAGTTAGTTTGCTA +
Preference number: 4 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYDTDSS*LGVSLL
Trigger: TAGCAAACTAACTCCTAAGCAAGATGAGTCAGTGTC...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACACAACTGCTCTTCCTTaGTGTTTATCTTCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYTTALP*CLSSVG
Trigger: ACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGT...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGATGAAGGAACCCTATTaGCTAACCATCCATAAATAT +
Preference number: 4 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQMKEPY*LTIHKY
Trigger: ATATTTATGGATGGTTAGGCAATAGGGTTCCTTCAT...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACACCTTTGGAAAGAACTaGTTTGCTTCAATAGCTGTC +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYTFGKN*FASIAV
Trigger: GACAGCTATTGAAGCAAACCAGTTCTTTCCAAAGGT...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAAACGTCTTTTCTACTTTaGCAACGAAGTCCTTTACAG +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKTSFLL*QRSPLQ
Trigger: CTGTAAAGGACTTCGTTGCCAAAGTAGAAAAGACGT...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp AACCTTTTCCTTTTTAAACTTTGGCACTATTCGAAATACGGTGCTTCTGTTGTTCAGAGTGTAAGGCATTaGATACTCGCTCTTCATGTG +
Preference number: 4 (lower is better)
Translates to: NLFLFKLWHYSKYGASVVQSVRH*ILALHV
Trigger: CACATGAAGAGCGAGTATCCAATGCCTTACACTCTG...AACAACAGAAGCACCGTATTTCGAATAGTGCCAAAGTTTAAAAAGGAAAAGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CCA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACAACCTCAGGGAATTCCTaGATATCAACACTTTACTAT +
Preference number: 4 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTTSGNS*ISTLYY
Trigger: ATAGTAAAGTGTTGATATCCAGGAATTCCCTGAGGT...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACACAAACTGAACAAACATaGATTGTTAGTGACTTAGAG +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTQTEQT*IVSDLE
Trigger: CTCTAAGTCACTAACAATCCATGTTTGTTCAGTTTG...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAAGTCAGTTACAGAACTaGATAAACCTAAACCATGTT +
Preference number: 4 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTSQLQN*INLNHV
Trigger: AACATGGTTTAGGTTTATCCAGTTCTGTAACTGACT...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAATATATCAGGTCATTATaGGAAGCAAATTCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: SHRGASVVLTYLCRKLQEYIRSL*EANSQK
Trigger: TTTCTGGGAATTTGCTTCCCATAATGACCTGATATA...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGGTAGTTCCAAATTCCTaGATTACAAAAGTCAACAGA +
Preference number: 4 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQVVPNS*ITKVNR
Trigger: TCTGTTGACTTTTGTAATCCAGGAATTTGGAACTAC...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATCAAGGCAGTGCCCTTTaGGAAAGATGTCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYQGSAL*ERCLSS
Trigger: TGATGAAAGACATCTTTCCCAAAGGGCACTGCCTTG...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
3UTR CAA 72 bp CACATTTTGTTTATCCATTCATCCATCAGTGAACAGTaGGGTTGCTTCCACTTTTTGGCTCCTATGAATAAC +
Preference number: 4 (lower is better)
Translates to: HILFIHSSISEQ*GCFHFLAPMNN
Trigger: GTTATTCATAGGAGCCAAAAAGTGGAAGCAACCCAACTGTTCACTGATGGATGAATGGATAAACAAAATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611224.1
CDS-3UTR TCA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGACTGCACATCTTTTGTaGGCCTTGAATTTACACACT +
Preference number: 4 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLTAHLL*ALNLHT
Trigger: AGTGTGTAAATTCAAGGCTCACAAAAGATGTGCAGT...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCATGACACATTTTTCTaGATATCCATCTACGGAATC +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYHDTFF*ISIYGI
Trigger: GATTCCGTAGATGGATATTCAGAAAAATGTGTCATG...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATCATGACACATTTTTCTaGATATCCATCTACGGAATC +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYHDTFF*ISIYGI
Trigger: GATTCCGTAGATGGATATTCAGAAAAATGTGTCATG...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACAAAAATTGTCACCACTaGGTCAGTACCCTGTTTATT +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYKNCHH*VSTLFI
Trigger: AATAAACAGGGTACTGACTCAGTGGTGACAATTTTT...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATTATCACAATCCCAAATaGCCTAATCCATCAATTCAC +
Preference number: 4 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYYHNPK*PNPSIH
Trigger: GTGAATTGATGGATTAGGTCATTTGGGATTGTGATA...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCCAGTGCTAATCGTTTaGGAAATTTTGCTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYPVLIV*EILLKE
Trigger: TTCCTTTAGCAAAATTTCTCAAACGATTAGCACTGG...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATCCAGTGCTAATCGTTTaGGAAATTTTGCTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYPVLIV*EILLKE
Trigger: TTCCTTTAGCAAAATTTCTCAAACGATTAGCACTGG...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATTGGGGGTCAAGAATATaGAATATTATTCTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYWGSRI*NIILQA
Trigger: TGCCTGAAGAATAATATTTCATATTCTTGACCCCCA...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAATGCATACTGTTGCTATaGAAACTGTGTCATCTTTCA +
Preference number: 4 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCECILLL*KLCHLS
Trigger: TGAAAGATGACACAGTTTTCATAGCAACAGTATGCA...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATAGAAGATATGACCACTaGATGTTCATCAGAATTGAG +
Preference number: 4 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYRRYDH*MFIRIE
Trigger: CTCAATTCTGATGAACATGCAGTGGTCATATCTTCT...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGGCTTCCTCAATGACTTaGCTCACTGCTTTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLASSMT*LTAFFK
Trigger: TTTAAAGAAAGCAGTGAGGCAAGTCATTGAGGAAGC...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATATTCATCTGTTTCTGTaGTGTCATAATCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYIHLFL*CHNQRT
Trigger: AGTCCTCTGATTATGACAGCACAGAAACAGATGAAT...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACATGTGCTCTGTTTTTGTaGACAATTTTGATAATCCCT +
Preference number: 4 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTCALFL*TILIIP
Trigger: AGGGATTATCAAAATTGTGCACAAAAACAGAGCACA...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATCCACTGTTTAGACAATaGAATCGTCTCAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYPLFRQ*NRLRFL
Trigger: GAGGAATCTGAGACGATTGCATTGTCTAAACAGTGG...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTAACCACATATTGTTATaGAGTTGCACAGTAGGAACA +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLINHILL*SCTVGT
Trigger: TGTTCCTACTGTGCAACTGCATAACAATATGTGGTT...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGTCATCCAAAGCCATTTaGAGGAAAATTCTAGCTAAT +
Preference number: 4 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVSSKAI*RKILAN
Trigger: ATTAGCTAGAATTTTCCTGCAAATGGCTTTGGATGA...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATGAAATTTTCTACATCTaGACTGTCCACTATGGTTAC +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYEIFYI*TVHYGY
Trigger: GTAACCATAGTGGACAGTGCAGATGTAGAAAATTTC...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAAGAAATTTTCTACATCTaGACTGTCCACTATGGTTAC +
Preference number: 4 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCEEIFYI*TVHYGY
Trigger: GTAACCATAGTGGACAGTGCAGATGTAGAAAATTTC...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTGTCTGCCAAAAATCCTaGAAACTAAAATACATCTTG +
Preference number: 4 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLVCQKS*KLKYIL
Trigger: CAAGATGTATTTTAGTTTGCAGGATTTTTGGCAGAC...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATCCCACTTCCAATAACTaGTTGTGCAACAGTAAAATT +
Preference number: 4 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYPTSNN*LCNSKI
Trigger: AATTTTACTGTTGCACAAGCAGTTATTGGAAGTGGG...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTCCCACTTCCAATAACTaGTTGTGCAACAGTAAAATT +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLIPTSNN*LCNSKI
Trigger: AATTTTACTGTTGCACAAGCAGTTATTGGAAGTGGG...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATAGTGGACATATTGGATaGTATAAATCTTTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYSGHIG*YKSLQA
Trigger: TGCCTGCAAAGATTTATACCATCCAATATGTCCACT...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAAAGTGGACATATTGGATaGTATAAATCTTTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCESGHIG*YKSLQA
Trigger: TGCCTGCAAAGATTTATACCATCCAATATGTCCACT...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATCCAACATTTTGGTACTaGCTCGTTCCAGTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYPTFWY*LVPVSL
Trigger: TAGAGAAACTGGAACGAGCCAGTACCAAAATGTTGG...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTGTCATCAAAGGATaGTGCAGCAAATATATCATC +
Preference number: 4 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYLVIKG*CSKYII
Trigger: GATGATATATTTGCTGCACCATCCTTTGATGACAAG...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAAACCTCAGGGAATTCCTaGATATCAACACTTTACTAT +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKTSGNS*ISTLYY
Trigger: ATAGTAAAGTGTTGATATCCAGGAATTCCCTGAGGT...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATATTTTTGTATTAAGTTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYIFVLS*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGCCAACTTAATACAAAAAT...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATTTAAGAAAATCTCCTTaGTCTGCAGGGTATGGTCTG +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYLRKSP*SAGYGL
Trigger: CAGACCATACCCTGCAGACCAAGGAGATTTTCTTAA...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACAAGTCAGTTACAGAACTaGATAAACCTAAACCATGTT +
Preference number: 4 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTSQLQN*INLNHV
Trigger: AACATGGTTTAGGTTTATCCAGTTCTGTAACTGACT...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATACTGCACATCTTTTGTaGGCCTTGAATTTACACACT +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYTAHLL*ALNLHT
Trigger: AGTGTGTAAATTCAAGGCTCACAAAAGATGTGCAGT...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATATTAAATCAAACACCTaGGCCGGATTTAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYIKSNT*AGFSNC
Trigger: ACAGTTGCTAAATCCGGCTCAGGTGTTTGATTTAAT...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR TCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATACTAGGAGTTGGAGGTaGTACCAATCTACATTCAAA +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYTRSWR*YQSTFK
Trigger: TTTGAATGTAGATTGGTATCACCTCCAACTCCTAGT...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp AACCTTTTCCTTTTTAAACTTTGGCACTATTCGAAATACGGTGCTTCTGTTGTTGTCATCAAAGGATGGTaGAGCAAATATATCATCCTC +
Preference number: 4 (lower is better)
Translates to: NLFLFKLWHYSKYGASVVVIKGW*SKYIIL
Trigger: GAGGATGATATATTTGCTGCACCATCCTTTGATGAC...AACAACAGAAGCACCGTATTTCGAATAGTGCCAAAGTTTAAAAAGGAAAAGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR GCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAATGTGCTCTGTTTTTGTaGACAATTTTGATAATCCCT +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKCALFL*TILIIP
Trigger: AGGGATTATCAAAATTGTGCACAAAAACAGAGCACA...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp TCAATGTTTGCCAGTAACATTTTGTTGATAATCGAACTCCCAGCAATTGAGGCATGTGCTCTGTTTTTGTaGACAATTTTGATAATCCCT +
Preference number: 4 (lower is better)
Translates to: SMFASNILLIIELPAIEACALFL*TILIIP
Trigger: AGGGATTATCAAAATTGTGCACAAAAACAGAGCACA...TGCCTCAATTGCTGGGAGTTCGATTATCAACAAAATGTTACTGGCAAACATTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR GCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATACAGTGAATTGTGGCTaGGTCACATATCCTAGTAAT +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYTVNCG*VTYPSN
Trigger: ATTACTAGGATATGTGACGCAGCCACAATTCACTGT...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATCTATTCGAAATACGGTaGTTCTGTTGTTCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYLFEIR*FCCSFW
Trigger: CCAAAAGGAACAACAGAAGCACCGTATTTCGAATAG...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATGTGCTTACTTATCTATaGAGAAAACTACAAGAACAG +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYVLTYL*RKLQEQ
Trigger: CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTATATTGTTATGCAGTTaGACAGTAGGAACATTCCAT +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLIILLCS*TVGTFH
Trigger: ATGGAATGTTCCTACTGTGCAACTGCATAACAATAT...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATATATTGTTATGCAGTTaGACAGTAGGAACATTCCAT +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYILLCS*TVGTFH
Trigger: ATGGAATGTTCCTACTGTGCAACTGCATAACAATAT...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTTCATCCAAAGCCATTTaGAGGAAAATTCTAGCTAAT +
Preference number: 4 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLISSKAI*RKILAN
Trigger: ATTAGCTAGAATTTTCCTGCAAATGGCTTTGGATGA...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR GCA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATTTTTCACAAAACAACTaGTCTTCCTTGCTGTTTATC +
Preference number: 4 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYFSQNN*SSLLFI
Trigger: GATAAACAGCAAGGAAGAGCAGTTGTTTTGTGAAAA...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATACGTCTTTTCTACTTTaGCAACGAAGTCCTTTACAG +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYTSFLL*QRSPLQ
Trigger: CTGTAAAGGACTTCGTTGCCAAAGTAGAAAAGACGT...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATGGGAGGCTATTCTATTaGCTAACAATTACTAGTGGA +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYGRLFY*LTITSG
Trigger: TCCACTAGTAATTGTTAGCCAATAGAATAGCCTCCC...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAATATATCAGGTCATTATaGGAAGCAAATTCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: KISSHRGASVVLTYLCRKYIRSL*EANSQK
Trigger: TTTCTGGGAATTTGCTTCCCATAATGACCTGATATA...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAAGTAGTTCCAAATTCCTaGATTACAAAAGTCAACAGA +
Preference number: 4 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCEVVPNS*ITKVNR
Trigger: TCTGTTGACTTTTGTAATCCAGGAATTTGGAACTAC...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR TCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATCAAGTCATCGTTCACTaGCTCTCATGTATAACTAAT +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYQVIVH*LSCITN
Trigger: ATTAGTTATACATGAGAGTCAGTGAACGATGACTTG...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATCTTGTCATCAAAGGATaGTGCAGCAAATATATCATC +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYLVIKG*CSKYII
Trigger: GATGATATATTTGCTGCACCATCCTTTGATGACAAG...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR GCA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATGTGCTTACTTATCTATaGAGAAAACTACAAGAACAG +
Preference number: 4 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYVLTYL*RKLQEQ
Trigger: CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS CCA 90 bp TTGGTCCGGATCTGCCCCGAGGTAGACACTTTGCGGATCAGTTTCTaGGGTCCCTCTTGCTCCGCTTCGCTGTCAGACGAATCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: LVRICPEVDTLRISF*GPSCSASLSDESSP
Trigger: GGGAGAGGATTCGTCTGACAGCGAAGCGGAGCAAGAGGGACCCCAGAAACTGATCCGCAAAGTGTCTACCTCGGGGCAGATCCGGACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000611224.1
CDS-3UTR CAA 90 bp ATCAGTTTGGGAATGGCCATAACTTGCCCGGGCATCTGGAGACCGAGGTGCAGTGACTCTCCGGGCACCTaGGGTTGGCTTTATTCAGGG +
Preference number: 5 (lower is better)
Translates to: ISLGMAITCPGIWRPRCSDSPGT*GWLYSG
Trigger: CCCTGAATAAAGCCAACCCAAGGTGCCCGGAGAGTC...ACTGCACCTCGGTCTCCAGATGCCCGGGCAAGTTATGGCCATTCCCAAACTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CAA 90 bp CAACACGGCTATGCCTTGCAAGCTGGGAAGAGGAATATACTGCCCATCACACTCCGCTTCACCATCCACTaGCACTGGGACTCCTTCGTC +
Preference number: 5 (lower is better)
Translates to: QHGYALQAGKRNILPITLRFTIH*HWDSFV
Trigger: GACGAAGGAGTCCCAGTGCAAGTGGATGGTGAAGCG...GAGTGTGATGGGCAGTATATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CAA 90 bp TCGCTTCACATGACCCACTTTCGGTATCCCCAGATCCTTAAGATCTCGCCTTTCTCGAACTCCCAGCAATaGAGGCAGCCAGTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: SLHMTHFRYPQILKISPFSNSQQ*RQPVLL
Trigger: GAGCAGGACTGGCTGCCTCAATTGCTGGGAGTTCGA...GAAAGGCGAGATCTTAAGGATCTGGGGATACCGAAAGTGGGTCATGTGAAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp CCCAGATCCTTAAGATCTCGCCTTTCCAGATGCAAAAGTTCAGCCCCTCTGATGTCCGGGCACCTTGGGTaGGCTTTATTCAGGGCATGG +
Preference number: 5 (lower is better)
Translates to: PRSLRSRLSRCKSSAPLMSGHLG*ALFRAW
Trigger: CCATGCCCTGAATAAAGCCAACCCAAGGTGCCCGGA...CATCAGAGGGGCTGAACTTTTGCATCTGGAAAGGCGAGATCTTAAGGATCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp TCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATCCCCAGATCCTTAAGGACTCTCCGGGCACCTaGGGTTGGCTTTATTCAGGG +
Preference number: 5 (lower is better)
Translates to: SLENSLHMTHFRYPQILKDSPGT*GWLYSG
Trigger: CCCTGAATAAAGCCAACCCAAGGTGCCCGGAGAGTC...CTTAAGGATCTGGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp TTCCAGCCATTACAGTCATTGCAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGGTGCGGCCTCGAAGTTaGAAGTATCGCTTTTTCCAC +
Preference number: 5 (lower is better)
Translates to: FQPLQSLQSGAGGNFSPQVRPRS*KYRFFH
Trigger: GTGGAAAAAGCGATACTTCAAACTTCGAGGCCGCAC...CTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp GCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACTACCAAAGCAACACGGCTATGCCTaGCAAGCTGGGAAGAGGAAT +
Preference number: 5 (lower is better)
Translates to: ADPAKQQLPLCPISELPKQHGYA*QAGKRN
Trigger: ATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTTG...CTTTGGTAGTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp CAACACGGCTATGCCTTGCAAGCTGGGAAGAGGAATATACTGCCCATCACACTCGCGACACCTCTTCTGTaGCCAAGTCAATGGCGTGAT +
Preference number: 5 (lower is better)
Translates to: QHGYALQAGKRNILPITLATPLL*PSQWRD
Trigger: ATCACGCCATTGACTTGGCAACAGAAGAGGTGTCGC...GAGTGTGATGGGCAGTATATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS TCA 90 bp GGGCCACCTCGTAGGGTTCTCTGGTCTGTACAGACTTCAGTGAGCTaGTCCAATCCTCCATCTCCTTTCTGTTCTCAGCACACAGCATTA +
Preference number: 5 (lower is better)
Translates to: GPPRRVLWSVQTSVS*SNPPSPFCSQHTAL
Trigger: TAATGCTGTGTGCTGAGAACAGAAAGGAGATGGAGGATTGGATCAGCTCACTGAAGTCTGTACAGACCAGAGAACCCTACGAGGTGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000498255.6
ENST00000536612.3
ENST00000626247.2
ENST00000627777.2
ENST00000628433.2
CDS TCA 90 bp AAACTGGGCCACCTCGTAGGGTTCTCTGGTCTGTACAGACTTCAGTaGGCTGATCCAATCCTCCATCTCCTTTCTGTTCTCAGCACACAG +
Preference number: 5 (lower is better)
Translates to: KLGHLVGFSGLYRLQ*ADPILHLLSVLSTQ
Trigger: CTGTGTGCTGAGAACAGAAAGGAGATGGAGGATTGGATCAGCTCACTGAAGTCTGTACAGACCAGAGAACCCTACGAGGTGGCCCAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000498255.6
ENST00000536612.3
ENST00000626247.2
ENST00000627777.2
ENST00000628433.2
CDS-3UTR CAA 90 bp CAACACGGCTATGCCTTGCAAGCTGGGAAGAGGAATATACTGCCCATCACACTCCACCTGTCCAACATTTaGGTACTGGCTCGTTCCAGT +
Preference number: 5 (lower is better)
Translates to: QHGYALQAGKRNILPITLHLSNI*VLARSS
Trigger: ACTGGAACGAGCCAGTACCAAAATGTTGGACAGGTG...GAGTGTGATGGGCAGTATATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CAA 90 bp AATGTTCAACACGGCTATGCCTTGCAAGCTGGGAAGAGGAATATACTGCCCATCACAGGGAGGTTTTCTTaGCTGGCTGCCACAGCTGGA +
Preference number: 5 (lower is better)
Translates to: NVQHGYALQAGKRNILPITGRFS*LAATAG
Trigger: TCCAGCTGTGGCAGCCAGCAAAGAAAACCTCCCTGT...GATGGGCAGTATATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTTGAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CAA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCCAACACGGCTATGCCTaGCAAGCTGGGAAGAGGAAT +
Preference number: 5 (lower is better)
Translates to: NGTERKYILADGLPFPALQHGYA*QAGKRN
Trigger: ATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTTG...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTCGCTTCACCATCCACTaGCACTGGGACTCCTTCGTC +
Preference number: 5 (lower is better)
Translates to: RNSTNMITPPTVECSFQARFTIH*HWDSFV
Trigger: GACGAAGGAGTCCCAGTGCAAGTGGATGGTGAAGCG...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CAA 90 bp CAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACGCGACACCTCTTCTGTaGCCAAGTCAATGGCGTGAT +
Preference number: 5 (lower is better)
Translates to: QIEQIQPSSNFLCAPFLNATPLL*PSQWRD
Trigger: ATCACGCCATTGACTTGGCAACAGAAGAGGTGTCGC...GTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp GGAACTTCTCACCCCAGCTCATGCATAGATCAAAGCATAGAGGCCCCATCCCACAGCATGGGCCAGTTCTaGCTCCAAAAGACAGTGAAT +
Preference number: 5 (lower is better)
Translates to: GTSHPSSCIDQSIEAPSHSMGQF*LQKTVN
Trigger: ATTCACTGTCTTTTGGAGCAAGAACTGGCCCATGCT...GTGGGATGGGGCCTCTATGCTTTGATCTATGCATGAGCTGGGGTGAGAAGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCGACTCTCCGGGCACCTaGGGTTGGCTTTATTCAGGG +
Preference number: 5 (lower is better)
Translates to: LPRNSTNMITPPTVECSFDSPGT*GWLYSG
Trigger: CCCTGAATAAAGCCAACCCAAGGTGCCCGGAGAGTC...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CAA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCGACTCTCCGGGCACCTaGGGTTGGCTTTATTCAGGG +
Preference number: 5 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIDSPGT*GWLYSG
Trigger: CCCTGAATAAAGCCAACCCAAGGTGCCCGGAGAGTC...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AATCAGTTTGGGAATGGCCATAACTTGCCCGGGCATCTGGAGACCGAGGTGCAGCTTCTGTTGTTCCTTTaGGTGCAATCCATAGGAGGT +
Preference number: 5 (lower is better)
Translates to: NQFGNGHNLPGHLETEVQLLLFL*VQSIGG
Trigger: ACCTCCTATGGATTGCACCAAAAGGAACAACAGAAG...CTGCACCTCGGTCTCCAGATGCCCGGGCAAGTTATGGCCATTCCCAAACTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CAA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGTTTCTGGGGTCCCTCTaGCTCCGCTTCGCTGTCAGA +
Preference number: 5 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQFLGSL*LRFAVR
Trigger: TCTGACAGCGAAGCGGAGCAAGAGGGACCCCAGAAA...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CAA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTTCGCAGACAGCACACTaGGCACTTACAGGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: RNSTNMITPPTVECSFQASQTAH*ALTGRL
Trigger: CAACCTGCCTGTAAGTGCCAAGTGTGCTGTCTGCGA...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000627777.2
CDS-3UTR CAA 90 bp TCGCTTCACATGACCCACTTTCGGTATCCCCAGATCCTTAAGATCTCGCCTTTCCACCTGTCCAACATTTaGGTACTGGCTCGTTCCAGT +
Preference number: 5 (lower is better)
Translates to: SLHMTHFRYPQILKISPFHLSNI*VLARSS
Trigger: ACTGGAACGAGCCAGTACCAAAATGTTGGACAGGTG...GAAAGGCGAGATCTTAAGGATCTGGGGATACCGAAAGTGGGTCATGTGAAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTACAGGGAGGTTTTCTTaGCTGGCTGCCACAGCTGGA +
Preference number: 5 (lower is better)
Translates to: RNSTNMITPPTVECSFQATGRFS*LAATAG
Trigger: TCCAGCTGTGGCAGCCAGCAAAGAAAACCTCCCTGT...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CAA 90 bp GTGGCGATTCCAGCTGCAAAGGAACCCTGCCAACTAGCAAAGATTCTGTTTCATCAACACGGCTATGCCTaGCAAGCTGGGAAGAGGAAT +
Preference number: 5 (lower is better)
Translates to: VAIPAAKEPCQLAKILFHQHGYA*QAGKRN
Trigger: ATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTTG...ATGAAACAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGCTGGAATCGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CAA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCGCTTCACCATCCACTaGCACTGGGACTCCTTCGTC +
Preference number: 5 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMRFTIH*HWDSFV
Trigger: GACGAAGGAGTCCCAGTGCAAGTGGATGGTGAAGCG...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGCGCTTCACCATCCACTaGCACTGGGACTCCTTCGTC +
Preference number: 5 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQRFTIH*HWDSFV
Trigger: GACGAAGGAGTCCCAGTGCAAGTGGATGGTGAAGCG...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACCGCTTCACCATCCACTaGCACTGGGACTCCTTCGTC +
Preference number: 5 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHRFTIH*HWDSFV
Trigger: GACGAAGGAGTCCCAGTGCAAGTGGATGGTGAAGCG...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp TCCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATTCCGGGCACCTTGGGTaGGCTTTATTCAGGGCATGG +
Preference number: 5 (lower is better)
Translates to: SKLFNSLENSLHMTHFRYSGHLG*ALFRAW
Trigger: CCATGCCCTGAATAAAGCCAACCCAAGGTGCCCGGA...ATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CAA 90 bp TCTCTTGTAAGACTCTCCGGGCACCTTGGGTTGGCTTTATTCAGGGCATGGGAGACAGAGTGTAAGGCATaGGATACTCGCTCTTCATGT +
Preference number: 5 (lower is better)
Translates to: SLVRLSGHLGLALFRAWETECKA*DTRSSC
Trigger: ACATGAAGAGCGAGTATCCAATGCCTTACACTCTGT...CTCCCATGCCCTGAATAAAGCCAACCCAAGGTGCCCGGAGAGTCTTACAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CAA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCTGTCTGTTACTGACTTaGCTGACACCAGCACTGCCT +
Preference number: 5 (lower is better)
Translates to: NGTERKYILADGLPFPALCLLLT*LTPALP
Trigger: AGGCAGTGCTGGTGTCAGCAAAGTCAGTAACAGACA...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AATGGAACTGAAAGAAAATACATTCTGGCTGATGGCCTCCCCTTCCCTGCCCTCTTTCACCATGTTGACTaGTCTCGAGCTCCTGACCTC +
Preference number: 5 (lower is better)
Translates to: NGTERKYILADGLPFPALFHHVD*SRAPDL
Trigger: GAGGTCAGGAGCTCGAGACAAGTCAACATGGTGAAA...GAGGGCAGGGAAGGGGAGGCCATCAGCCAGAATGTATTTTCTTTCAGTTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAATTTCTGGGGTCCCTCTaGCTCCGCTTCGCTGTCAGA +
Preference number: 5 (lower is better)
Translates to: SHRGASVVLTYLCRKLQEFLGSL*LRFAVR
Trigger: TCTGACAGCGAAGCGGAGCAAGAGGGACCCCAGAAA...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CAA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGTCGCAGACAGCACACTaGGCACTTACAGGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQSQTAH*ALTGRL
Trigger: CAACCTGCCTGTAAGTGCCAAGTGTGCTGTCTGCGA...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CTCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCACAGAACGAAAATGTaGCTCTACAGAAACCATCGG +
Preference number: 5 (lower is better)
Translates to: LSQIEQIQPSSNFLCAPFHRTKM*LYRNHR
Trigger: CCGATGGTTTCTGTAGAGCAACATTTTCGTTCTGTG...AAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp GCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACTACCAAAGGTTTCACATAGCGTCTaGGCAGAAGATATGACCACT +
Preference number: 5 (lower is better)
Translates to: ADPAKQQLPLCPISELPKVSHSV*AEDMTT
Trigger: AGTGGTCATATCTTCTGCCAAGACGCTATGTGAAAC...CTTTGGTAGTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCACAGGGAGGTTTTCTTaGCTGGCTGCCACAGCTGGA +
Preference number: 5 (lower is better)
Translates to: TSLPRNSTNMITPPTVECTGRFS*LAATAG
Trigger: TCCAGCTGTGGCAGCCAGCAAAGAAAACCTCCCTGT...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CAA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGTCGAACTCCCAGCAATaGAGGCAGCCAGTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQSNSQQ*RQPVLL
Trigger: GAGCAGGACTGGCTGCCTCAATTGCTGGGAGTTCGA...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGTCGAACTCCCAGCAATaGAGGCAGCCAGTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRSNSQQ*RQPVLL
Trigger: GAGCAGGACTGGCTGCCTCAATTGCTGGGAGTTCGA...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCCAACACGGCTATGCCTaGCAAGCTGGGAAGAGGAAT +
Preference number: 5 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIQHGYA*QAGKRN
Trigger: ATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTTG...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACAGCATGGGCCAGTTCTaGCTCCAAAAGACAGTGAAT +
Preference number: 5 (lower is better)
Translates to: QIEQIQPSSNFLCAPFLNSMGQF*LQKTVN
Trigger: ATTCACTGTCTTTTGGAGCAAGAACTGGCCCATGCT...GTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGTCCGGGCACCTTGGGTaGGCTTTATTCAGGGCATGG +
Preference number: 5 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQSGHLG*ALFRAW
Trigger: CCATGCCCTGAATAAAGCCAACCCAAGGTGCCCGGA...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTGACTCTCCGGGCACCTaGGGTTGGCTTTATTCAGGG +
Preference number: 5 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSDSPGT*GWLYSG
Trigger: CCCTGAATAAAGCCAACCCAAGGTGCCCGGAGAGTC...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp TCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATCCCCAGATCCTTAAGTACAGCGCCTTCACATaGATGGCTATTTCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: SLENSLHMTHFRYPQILKYSAFT*MAISVA
Trigger: TGCCACTGAAATAGCCATCAATGTGAAGGCGCTGTA...CTTAAGGATCTGGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATGGCTCACTGCAGCCTaGAACTCCTGGTCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLWLTAA*NSWSQA
Trigger: TGCTTGAGACCAGGAGTTCAAGGCTGCAGTGAGCCA...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS TCA 90 bp TTGTCATATCTGAGAAATCATTGCCTGGGCAGATTATTCTGGTATTaGGCACAGGGAGGTTTTCTTTGCTGGCTGCCACAGCTGGACCAG +
Preference number: 5 (lower is better)
Translates to: LSYLRNHCLGRLFWY*AQGGFLCWLPQLDQ
Trigger: CTGGTCCAGCTGTGGCAGCCAGCAAAGAAAACCTCCCTGTGCTCAATACCAGAATAATCTGCCCAGGCAATGATTTCTCAGATATGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498255.6
CDS GCA 90 bp TTGTCTTACACCAAAGGCATTTCCAATCCTGTAGACGGAGAACACTaGCACATGTTTTGTCGCAGACAGCACACTTGGCACTTACAGGCA +
Preference number: 5 (lower is better)
Translates to: LSYTKGISNPVDGEH*HMFCRRQHTWHLQA
Trigger: TGCCTGTAAGTGCCAAGTGTGCTGTCTGCGACAAAACATGTGGCAGTGTTCTCCGTCTACAGGATTGGAAATGCCTTTGGTGTAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000498255.6
ENST00000536612.3
ENST00000627777.2
ENST00000628433.2
CDS-3UTR CAA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTTTTCTGGGGTCCCTCTaGCTCCGCTTCGCTGTCAGA +
Preference number: 5 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLFLGSL*LRFAVR
Trigger: TCTGACAGCGAAGCGGAGCAAGAGGGACCCCAGAAA...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CAA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCCGAGGTAGACACTTaGCGGATCAGTTTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQPEVDT*RISFWG
Trigger: ACCCCAGAAACTGATCCGCAAAGTGTCTACCTCGGG...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CAA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGTCGCAGACAGCACACTaGGCACTTACAGGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQSQTAH*ALTGRL
Trigger: CAACCTGCCTGTAAGTGCCAAGTGTGCTGTCTGCGA...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CCCAGATCCTTAAGATCTCGCCTTTCCAGATGCAAAAGTTCAGCCCCTCTGATGAGGCAGTGTGTACCATaGTCTTACACCAAAGGCATT +
Preference number: 5 (lower is better)
Translates to: PRSLRSRLSRCKSSAPLMRQCVP*SYTKGI
Trigger: AATGCCTTTGGTGTAAGACAATGGTACACACTGCCT...CATCAGAGGGGCTGAACTTTTGCATCTGGAAAGGCGAGATCTTAAGGATCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp CCTGGGAGCATAGCTGCATCTGCGACACCTCTTCTGTTGCCAAGTCAATGGCGTTCTCCACTCTTAGAATaGACAAAAACCAATAGAGGA +
Preference number: 5 (lower is better)
Translates to: PGSIAASATPLLLPSQWRSPLLE*TKTNRG
Trigger: TCCTCTATTGGTTTTTGTCAATTCTAAGAGTGGAGA...ACGCCATTGACTTGGCAACAGAAGAGGTGTCGCAGATGCAGCTATGCTCCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CAA 90 bp TCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCCAGATTATTCTGGTATaGAGCACAGGGAGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: SPKLSRSSQAATSSVPHFQIILV*STGRFS
Trigger: AGAAAACCTCCCTGTGCTCAATACCAGAATAATCTG...GAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp AGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAATCGAACTCCCAGCAATaGAGGCAGCCAGTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: SGAYLSMQKTTRTATCFQSNSQQ*RQPVLL
Trigger: GAGCAGGACTGGCTGCCTCAATTGCTGGGAGTTCGA...TTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp GCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACTACCAAAGGCCAGTAACATTTTGTaGATAATCGAACTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: ADPAKQQLPLCPISELPKASNIL*IIELPA
Trigger: TGCTGGGAGTTCGATTATCAACAAAATGTTACTGGC...CTTTGGTAGTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp TCGCTTCACATGACCCACTTTCGGTATCCCCAGATCCTTAAGATCTCGCCTTTCACAACTTCCAGGATCTaGTCATCAAAGGATGGTGCA +
Preference number: 5 (lower is better)
Translates to: SLHMTHFRYPQILKISPFTTSRI*SSKDGA
Trigger: TGCACCATCCTTTGATGACAAGATCCTGGAAGTTGT...GAAAGGCGAGATCTTAAGGATCTGGGGATACCGAAAGTGGGTCATGTGAAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp GGAACTTCTCACCCCAGCTCATGCATAGATCAAAGCATAGAGGCCCCATCCCACGCATGCTATCAAATATaGCTACAACTTCCAGGATCT +
Preference number: 5 (lower is better)
Translates to: GTSHPSSCIDQSIEAPSHACYQI*LQLPGS
Trigger: AGATCCTGGAAGTTGTAGCAATATTTGATAGCATGC...GTGGGATGGGGCCTCTATGCTTTGATCTATGCATGAGCTGGGGTGAGAAGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACAGCGACACCTCTTCTGTaGCCAAGTCAATGGCGTGAT +
Preference number: 5 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTATPLL*PSQWRD
Trigger: ATCACGCCATTGACTTGGCAACAGAAGAGGTGTCGC...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTTCCGGGCACCTTGGGTaGGCTTTATTCAGGGCATGG +
Preference number: 5 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLSGHLG*ALFRAW
Trigger: CCATGCCCTGAATAAAGCCAACCCAAGGTGCCCGGA...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACAGACTCTCCGGGCACCTaGGGTTGGCTTTATTCAGGG +
Preference number: 5 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTDSPGT*GWLYSG
Trigger: CCCTGAATAAAGCCAACCCAAGGTGCCCGGAGAGTC...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp TCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATCCCCAGATCCTTAAGACAGAGTGTAAGGCATaGGATACTCGCTCTTCATGT +
Preference number: 5 (lower is better)
Translates to: SLENSLHMTHFRYPQILKTECKA*DTRSSC
Trigger: ACATGAAGAGCGAGTATCCAATGCCTTACACTCTGT...CTTAAGGATCTGGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp CCCAGATCCTTAAGATCTCGCCTTTCCAGATGCAAAAGTTCAGCCCCTCTGATGCTTCTGTTGTTCCTTTaGGTGCAATCCATAGGAGGT +
Preference number: 5 (lower is better)
Translates to: PRSLRSRLSRCKSSAPLMLLLFL*VQSIGG
Trigger: ACCTCCTATGGATTGCACCAAAAGGAACAACAGAAG...CATCAGAGGGGCTGAACTTTTGCATCTGGAAAGGCGAGATCTTAAGGATCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCCCTGGCACCTCCTGTTaGGTTGCACAGGAAAGTGTT +
Preference number: 5 (lower is better)
Translates to: TSLPRNSTNMITPPTVECPGTSC*VAQESV
Trigger: AACACTTTCCTGTGCAACCAAACAGGAGGTGCCAGG...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261491.9
CDS-3UTR CAA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTGGCTCACTGCAGCCTaGAACTCCTGGTCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDWLTAA*NSWSQA
Trigger: TGCTTGAGACCAGGAGTTCAAGGCTGCAGTGAGCCA...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCATATTCCGGGGACCTTTaGAAGCCCTCGGACCTCACA +
Preference number: 5 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPYSGDL*KPSDLT
Trigger: TGTGAGGTCCGAGGGCTTCAAAAGGTCCCCGGAATA...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp GGAACTTCTCACCCCAGCTCATGCATAGATCAAAGCATAGAGGCCCCATCCCACATGTTGACAGCCCAGTaGGAGATAGAAGATGTTTTA +
Preference number: 5 (lower is better)
Translates to: GTSHPSSCIDQSIEAPSHMLTAQ*EIEDVL
Trigger: TAAAACATCTTCTATCTCCAACTGGGCTGTCAACAT...GTGGGATGGGGCCTCTATGCTTTGATCTATGCATGAGCTGGGGTGAGAAGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS GCA 90 bp TCTACATGCTCAATGCATTACAAAGCAAAGGTTGGCCAAAGAAGATaGAAAACAGAGTGCAGCGGCAGTGCAGGCTGTGAACTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: STCSMHYKAKVGQRR*KTECSGSAGCELVF
Trigger: GAAGACAAGTTCACAGCCTGCACTGCCGCTGCACTCTGTTTTGCATCTTCTTTGGCCAACCTTTGCTTTGTAATGCATTGAGCATGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS CCA 90 bp AACCCCCTTAATTTCTACATGCTCAATGCATTACAAAGCAAAGGTTaGCCAAAGAAGATGCAAAACAGAGTGCAGCGGCAGTGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: NPLNFYMLNALQSKG*PKKMQNRVQRQCRL
Trigger: CAGCCTGCACTGCCGCTGCACTCTGTTTTGCATCTTCTTTGGCCAACCTTTGCTTTGTAATGCATTGAGCATGTAGAAATTAAGGGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp GACCTGTCAGAATTTCCCTCCAGTTCAAGGCTGAATAATGTCCCATTATTATATTTTCTGGGGTCCCTCTaGCTCCGCTTCGCTGTCAGA +
Preference number: 5 (lower is better)
Translates to: DLSEFPSSSRLNNVPLLYFLGSL*LRFAVR
Trigger: TCTGACAGCGAAGCGGAGCAAGAGGGACCCCAGAAA...ATATAATAATGGGACATTATTCAGCCTTGAACTGGAGGGAAATTCTGACAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611224.1
CDS-3UTR CAA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCATCTTTAATACTGGTCTaGGTCCGGATCTGCCCCGAG +
Preference number: 5 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPSLILV*VRICPE
Trigger: CTCGGGGCAGATCCGGACCAAGACCAGTATTAAAGA...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CAA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCGAGACTTTGAGTCCTTaGCATAGTAAAGGGTGCGGC +
Preference number: 5 (lower is better)
Translates to: TSLPRNSTNMITPPTVECETLSP*HSKGCG
Trigger: GCCGCACCCTTTACTATGCAAAGGACTCAAAGTCTC...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000379274.6
CDS-3UTR CAA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTTCGCAGACAGCACACTaGGCACTTACAGGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLSQTAH*ALTGRL
Trigger: CAACCTGCCTGTAAGTGCCAAGTGTGCTGTCTGCGA...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp TCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTACGTCTTTTCTACTTaGGCAACGAAGTCCTTTACA +
Preference number: 5 (lower is better)
Translates to: SPKLSRSSQAATSSVPHFYVFST*ATKSFT
Trigger: TGTAAAGGACTTCGTTGCCAAAGTAGAAAAGACGTA...GAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTATGATTTCCCTTGGTTaGACGGCTTTCTGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: RNSTNMITPPTVECSFQAMISLG*TAFWEE
Trigger: TTCCTCCCAGAAAGCCGTCAAACCAAGGGAAATCAT...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CAA 90 bp TTCCAGCCATTACAGTCATTGCAGTCAGGTGCAGGTGGGAACTTCTCACCCCAGACAGTTATTGATTCTTaGGCACCATCATCTTTAGCT +
Preference number: 5 (lower is better)
Translates to: FQPLQSLQSGAGGNFSPQTVIDS*APSSLA
Trigger: AGCTAAAGATGATGGTGCCAAAGAATCAATAACTGT...CTGGGGTGAGAAGTTCCCACCTGCACCTGACTGCAATGACTGTAATGGCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAATCGAACTCCCAGCAATaGAGGCAGCCAGTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCESNSQQ*RQPVLL
Trigger: GAGCAGGACTGGCTGCCTCAATTGCTGGGAGTTCGA...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CCAACTAGCAAAGATTCTGTTTCATTATACAGCGCCTTCACATTGATGGCTATTTCGAACTCCCAGCAATaGAGGCAGCCAGTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: PTSKDSVSLYSAFTLMAISNSQQ*RQPVLL
Trigger: GAGCAGGACTGGCTGCCTCAATTGCTGGGAGTTCGA...AATAGCCATCAATGTGAAGGCGCTGTATAATGAAACAGAATCTTTGCTAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CAA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACACAACACGGCTATGCCTaGCAAGCTGGGAAGAGGAAT +
Preference number: 5 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTQHGYA*QAGKRN
Trigger: ATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTTG...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACGCTTCACCATCCACTaGCACTGGGACTCCTTCGTC +
Preference number: 5 (lower is better)
Translates to: KISSHRGASVVLTYLCRKRFTIH*HWDSFV
Trigger: GACGAAGGAGTCCCAGTGCAAGTGGATGGTGAAGCG...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACGCGACACCTCTTCTGTaGCCAAGTCAATGGCGTGAT +
Preference number: 5 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDATPLL*PSQWRD
Trigger: ATCACGCCATTGACTTGGCAACAGAAGAGGTGTCGC...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCAGCATGGGCCAGTTCTaGCTCCAAAAGACAGTGAAT +
Preference number: 5 (lower is better)
Translates to: SPTAKYQATEVLQWCLLISMGQF*LQKTVN
Trigger: ATTCACTGTCTTTTGGAGCAAGAACTGGCCCATGCT...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCAGCATGGGCCAGTTCTaGCTCCAAAAGACAGTGAAT +
Preference number: 5 (lower is better)
Translates to: LPRNSTNMITPPTVECSFSMGQF*LQKTVN
Trigger: ATTCACTGTCTTTTGGAGCAAGAACTGGCCCATGCT...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CAA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAATCCGGGCACCTTGGGTaGGCTTTATTCAGGGCATGG +
Preference number: 5 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCESGHLG*ALFRAW
Trigger: CCATGCCCTGAATAAAGCCAACCCAAGGTGCCCGGA...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CTGTCAGTTTCTGTAATTCCACCTCCACAGAGTGTAAGGCATTGGATACTCGCTTACAGCGCCTTCACATaGATGGCTATTTCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: LSVSVIPPPQSVRHWILAYSAFT*MAISVA
Trigger: TGCCACTGAAATAGCCATCAATGTGAAGGCGCTGTA...AGCGAGTATCCAATGCCTTACACTCTGTGGAGGTGGAATTACAGAAACTGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CAA 90 bp TCTTTGTACTCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTTCCTCTGTGAATACGGTGCTTCTGTaGTTCCTTTTGGTGCAATCC +
Preference number: 5 (lower is better)
Translates to: SLYSPKLSRSSQAATSSVNTVLL*FLLVQS
Trigger: GGATTGCACCAAAAGGAACAACAGAAGCACCGTATT...CACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTTATAGTCAGACATACTaGGTCAGGAATCCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: RNSTNMITPPTVECSFQAYSQTY*VRNPSG
Trigger: CCCTGAGGGATTCCTGACCAAGTATGTCTGACTATA...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261491.9
CDS-3UTR CAA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACAGCACCTCCTGTTTGGTaGCACAGGAAAGTGTTCACA +
Preference number: 5 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTAPPVW*HRKVFT
Trigger: TGTGAACACTTTCCTGTGCAACCAAACAGGAGGTGC...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCAGCCATTACAGTCATaGCAGTCAGGTGCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLQPLQS*QSGAGG
Trigger: CCCACCTGCACCTGACTGCAATGACTGTAATGGCTG...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGTTTCACCATGTTGACTaGTCTCGAGCTCCTGACCTC +
Preference number: 5 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMFHHVD*SRAPDL
Trigger: GAGGTCAGGAGCTCGAGACAAGTCAACATGGTGAAA...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCTTGTACTCTCCCAAATaGAGCAGATCCAGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: LPRNSTNMITPPTVECSFLYSPK*SRSSQA
Trigger: TGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACAA...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp GCAAATTGCAGTAAAGATTCCCTGACACCTGAAAATGCGACCTTTCACCTCACATGCTTCACAATTGTATaGTTTTCGGCTGGGCGCGGT +
Preference number: 5 (lower is better)
Translates to: ANCSKDSLTPENATFHLTCFTIV*FSAGRG
Trigger: ACCGCGCCCAGCCGAAAACAATACAATTGTGAAGCA...TGTGAGGTGAAAGGTCGCATTTTCAGGTGTCAGGGAATCTTTACTGCAATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611224.1
CDS-3UTR CAA 90 bp CCTGAAAATGCGACCTTTCACCTCACAGTGACCTGTCAGAATTTCCCTCCAGTTCTGCGAATGTGCACATaGGGCAACTCCAATTTTTCA +
Preference number: 5 (lower is better)
Translates to: PENATFHLTVTCQNFPPVLRMCT*GNSNFS
Trigger: TGAAAAATTGGAGTTGCCCAATGTGCACATTCGCAG...AACTGGAGGGAAATTCTGACAGGTCACTGTGAGGTGAAAGGTCGCATTTTCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611224.1
CDS-3UTR CAA 90 bp GTGGCGATTCCAGCTGCAAAGGAACCCTGCCAACTAGCAAAGATTCTGTTTCATGGATGGTATAAATCTTaGCAGGCAGTGTGTACCTTC +
Preference number: 5 (lower is better)
Translates to: VAIPAAKEPCQLAKILFHGWYKS*QAVCTF
Trigger: GAAGGTACACACTGCCTGCAAAGATTTATACCATCC...ATGAAACAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGCTGGAATCGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS TCA 90 bp ACAGAGTGCAGCGGCAGTGCAGGCTGTGAACTTGTCTTCTGCTTCTaGACCTTTTCCTTTTTAAACTTTGGCACTATTCGAAATACGGTG +
Preference number: 5 (lower is better)
Translates to: TECSGSAGCELVFCF*TFSFLNFGTIRNTV
Trigger: CACCGTATTTCGAATAGTGCCAAAGTTTAAAAAGGAAAAGGTTCAGAAGCAGAAGACAAGTTCACAGCCTGCACTGCCGCTGCACTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTTCTTTAATACTGGTCTaGGTCCGGATCTGCCCCGAG +
Preference number: 5 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLSLILV*VRICPE
Trigger: CTCGGGGCAGATCCGGACCAAGACCAGTATTAAAGA...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CAA 90 bp TCCCTGGAGAATTCGCTTCACATGACCCACTTTCGGTATCCCCAGATCCTTAAGTCCATTTACAGTTATTaGTTGCTCTCACTGCACATC +
Preference number: 5 (lower is better)
Translates to: SLENSLHMTHFRYPQILKSIYSY*LLSLHI
Trigger: GATGTGCAGTGAGAGCAACAAATAACTGTAAATGGA...CTTAAGGATCTGGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATTCGCAGACAGCACACTaGGCACTTACAGGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYSQTAH*ALTGRL
Trigger: CAACCTGCCTGTAAGTGCCAAGTGTGCTGTCTGCGA...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CAACACGGCTATGCCTTGCAAGCTGGGAAGAGGAATATACTGCCCATCACACTCGATAGATACTTTACATaGACCAAGTGGACATATTGG +
Preference number: 5 (lower is better)
Translates to: QHGYALQAGKRNILPITLDRYFT*TKWTYW
Trigger: CCAATATGTCCACTTGGTCAATGTAAAGTATCTATC...GAGTGTGATGGGCAGTATATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CAA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCCACAGAACGAAAATGTaGCTCTACAGAAACCATCGG +
Preference number: 5 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIHRTKM*LYRNHR
Trigger: CCGATGGTTTCTGTAGAGCAACATTTTCGTTCTGTG...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTCACAGAACGAAAATGTaGCTCTACAGAAACCATCGG +
Preference number: 5 (lower is better)
Translates to: RNSTNMITPPTVECSFQAHRTKM*LYRNHR
Trigger: CCGATGGTTTCTGTAGAGCAACATTTTCGTTCTGTG...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CAA 90 bp GCAGATCCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACTACCAAAGCACTGTTTATTCAAGTaGAGCTTATCGATTTCTGAC +
Preference number: 5 (lower is better)
Translates to: ADPAKQQLPLCPISELPKHCLFK*SLSISD
Trigger: GTCAGAAATCGATAAGCTCAACTTGAATAAACAGTG...CTTTGGTAGTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGCACCTGTCCAACATTTaGGTACTGGCTCGTTCCAGT +
Preference number: 5 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRHLSNI*VLARSS
Trigger: ACTGGAACGAGCCAGTACCAAAATGTTGGACAGGTG...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCAGGGACAGAATCAGTTaGGGAATGGCCATAACTTGC +
Preference number: 5 (lower is better)
Translates to: TSLPRNSTNMITPPTVECRDRIS*GMAITC
Trigger: GCAAGTTATGGCCATTCCCAAACTGATTCTGTCCCT...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CAA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACACAGGGAGGTTTTCTTaGCTGGCTGCCACAGCTGGA +
Preference number: 5 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYTGRFS*LAATAG
Trigger: TCCAGCTGTGGCAGCCAGCAAAGAAAACCTCCCTGT...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGCCAAAAGACAGTGAATaGTGGCTGCGTCACATATCC +
Preference number: 5 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQPKDSE*WLRHIS
Trigger: GGATATGTGACGCAGCCACAATTCACTGTCTTTTGG...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCCCAAAAGACAGTGAATaGTGGCTGCGTCACATATCC +
Preference number: 5 (lower is better)
Translates to: TSLPRNSTNMITPPTVECPKDSE*WLRHIS
Trigger: GGATATGTGACGCAGCCACAATTCACTGTCTTTTGG...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CAA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGAGCATGGGCCAGTTCTaGCTCCAAAAGACAGTGAAT +
Preference number: 5 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMSMGQF*LQKTVN
Trigger: ATTCACTGTCTTTTGGAGCAAGAACTGGCCCATGCT...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCTTCTGTTGTTCCTTTaGGTGCAATCCATAGGAGGT +
Preference number: 5 (lower is better)
Translates to: LPRNSTNMITPPTVECSFLLLFL*VQSIGG
Trigger: ACCTCCTATGGATTGCACCAAAAGGAACAACAGAAG...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CAA 90 bp ATCTGTTTCTGTGCTGTCATAATCAGAGGACTGATTAGCTGGTTCACAGGGGTGAATACGGTGCTTCTGTaGTTCCTTTTGGTGCAATCC +
Preference number: 5 (lower is better)
Translates to: ICFCAVIIRGLISWFTGVNTVLL*FLLVQS
Trigger: GGATTGCACCAAAAGGAACAACAGAAGCACCGTATT...CACCCCTGTGAACCAGCTAATCAGTCCTCTGATTATGACAGCACAGAAACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CAA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCACCTCCTGTTTGGTaGCACAGGAAAGTGTTCACA +
Preference number: 5 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLAPPVW*HRKVFT
Trigger: TGTGAACACTTTCCTGTGCAACCAAACAGGAGGTGC...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCTGGCACCTCCTGTTaGGTTGCACAGGAAAGTGTT +
Preference number: 5 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLPGTSC*VAQESV
Trigger: AACACTTTCCTGTGCAACCAAACAGGAGGTGCCAGG...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACAAGCTCCCAGGTAATATaGATGCTGCTGGCCCATGGA +
Preference number: 5 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTSSQVI*MLLAHG
Trigger: TCCATGGGCCAGCAGCATCAATATTACCTGGGAGCT...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATGAGAGGCTAGCTGTGTaGGTCTGCCAATCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYERLAV*VCQSPV
Trigger: CACAGGAGATTGGCAGACCAACACAGCTAGCCTCTC...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTGAGAGGCTAGCTGTGTaGGTCTGCCAATCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLIERLAV*VCQSPV
Trigger: CACAGGAGATTGGCAGACCAACACAGCTAGCCTCTC...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCCACATCATAAACCCTaGTGTGGACTCCATCAAATG +
Preference number: 5 (lower is better)
Translates to: LPRNSTNMITPPTVECSFPHHKP*CGLHQM
Trigger: CATTTGATGGAGTCCACACAAGGGTTTATGATGTGG...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261491.9
CDS-3UTR CAA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGAGCCTCCTCCTTTaGTGGACCTTGTACAAAGTC +
Preference number: 5 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHLSLLL*WTLYKV
Trigger: GACTTTGTACAAGGTCCACAAAAGGAGGAGGCTCAA...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCAAAGTGTCCAATCTTTaGAGCCTCCTCCTTTTGTGG +
Preference number: 5 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIKVSNL*SLLLLW
Trigger: CCACAAAAGGAGGAGGCTCAAAAGATTGGACACTTT...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGTCAAGGCAGTGCCCTTaGGGAAAGATGTCTTTCATC +
Preference number: 5 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMSRQCP*GKMSFI
Trigger: GATGAAAGACATCTTTCCCAAAGGGCACTGCCTTGA...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGTTGTACTCTCCCAAATaGAGCAGATCCAGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMLYSPK*SRSSQA
Trigger: TGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACAA...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337343.9
ENST00000536612.3
CDS-3UTR CAA 90 bp GACCTGTCAGAATTTCCCTCCAGTTCAAGGCTGAATAATGTCCCATTATTATATAACATGATGAAACCCTaGGTCCGGATCTGCCCCGAG +
Preference number: 5 (lower is better)
Translates to: DLSEFPSSSRLNNVPLLYNMMKP*VRICPE
Trigger: CTCGGGGCAGATCCGGACCAAGGGTTTCATCATGTT...ATATAATAATGGGACATTATTCAGCCTTGAACTGGAGGGAAATTCTGACAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611224.1
CDS-3UTR CAA 90 bp CTGCTACGAACATGGTGTAGAACTGCTTCACAATTGTATTGTTTTCGGCTGGGCAGAACTGCTTCACAATaGTATTGTTTTCGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: LLRTWCRTASQLYCFRLGRTASQ*YCFRLG
Trigger: GCCCAGCCGAAAACAATACAATTGTGAAGCAGTTCT...GCCCAGCCGAAAACAATACAATTGTGAAGCAGTTCTACACCATGTTCGTAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611224.1
CDS TCA 90 bp TGGTCACTTCTCTTCATGAGACAAGCCATTGTCTTTTACAGAGTTTaGGGCTTTAGTCTGCACCACAAAAAGGGACCAGAAGTGAGAGTC +
Preference number: 5 (lower is better)
Translates to: WSLLFMRQAIVFYRV*GFSLHHKKGPEVRV
Trigger: GACTCTCACTTCTGGTCCCTTTTTGTGGTGCAGACTAAAGCCTCAAACTCTGTAAAAGACAATGGCTTGTCTCATGAAGAGAAGTGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498255.6
CDS TCA 90 bp GTGCTCCTTCCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCACATaGCCCACTTTCGGTATCCCCAGATCCATATGTTTACCATTTTCT +
Preference number: 5 (lower is better)
Translates to: VLLPSSLIPWRIRFT*PTFGIPRSICLPFS
Trigger: AGAAAATGGTAAACATATGGATCTGGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGGAAGGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536612.3
CDS-3UTR CAA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAATCTTTAATACTGGTCTaGGTCCGGATCTGCCCCGAG +
Preference number: 5 (lower is better)
Translates to: KISSHRGASVVLTYLCRKSLILV*VRICPE
Trigger: CTCGGGGCAGATCCGGACCAAGACCAGTATTAAAGA...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CAA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGGAGACTTTGAGTCCTTaGCATAGTAAAGGGTGCGGC +
Preference number: 5 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVETLSP*HSKGCG
Trigger: GCCGCACCCTTTACTATGCAAAGGACTCAAAGTCTC...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CAA 90 bp AGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGAGACTTTGAGTCCTTaGCATAGTAAAGGGTGCGGC +
Preference number: 5 (lower is better)
Translates to: SGAYLSMQKTTRTATCFQETLSP*HSKGCG
Trigger: GCCGCACCCTTTACTATGCAAAGGACTCAAAGTCTC...TTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CAA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACAGGCAGTGTGTACCATaGTCTTACACCAAAGGCATT +
Preference number: 5 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHRQCVP*SYTKGI
Trigger: AATGCCTTTGGTGTAAGACAATGGTACACACTGCCT...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAGGCAGTGTGTACCATaGTCTTACACCAAAGGCATT +
Preference number: 5 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQRQCVP*SYTKGI
Trigger: AATGCCTTTGGTGTAAGACAATGGTACACACTGCCT...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCGGATGGTATAAATCTTaGCAGGCAGTGTGTACCATT +
Preference number: 5 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIGWYKS*QAVCTI
Trigger: AATGGTACACACTGCCTGCAAAGATTTATACCATCC...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCGGATGGTATAAATCTTaGCAGGCAGTGTGTACCATT +
Preference number: 5 (lower is better)
Translates to: LPRNSTNMITPPTVECSFGWYKS*QAVCTI
Trigger: AATGGTACACACTGCCTGCAAAGATTTATACCATCC...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000627777.2
CDS-3UTR CAA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCACCTGTCCAACATTTaGGTACTGGCTCGTTCCAGT +
Preference number: 5 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLHLSNI*VLARSS
Trigger: ACTGGAACGAGCCAGTACCAAAATGTTGGACAGGTG...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCGTTTCACATAGCGTCTaGGCAGAAGATATGACCACT +
Preference number: 5 (lower is better)
Translates to: TSLPRNSTNMITPPTVECVSHSV*AEDMTT
Trigger: AGTGGTCATATCTTCTGCCAAGACGCTATGTGAAAC...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CAA 90 bp AATGGCGTGATGGATGTACAAATGGGTTCGGAGAACTGGTTTACCAGAATCACAGTTTCACATAGCGTCTaGGCAGAAGATATGACCACT +
Preference number: 5 (lower is better)
Translates to: NGVMDVQMGSENWFTRITVSHSV*AEDMTT
Trigger: AGTGGTCATATCTTCTGCCAAGACGCTATGTGAAAC...TGTGATTCTGGTAAACCAGTTCTCCGAACCCATTTGTACATCCATCACGCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CAA 90 bp AACTTTGGCACTATTCGAAATACGGTGCTTCTGTTGTTCCTTTTGGTGCAATCCATGATTTCCCTTGGTTaGACGGCTTTCTGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: NFGTIRNTVLLLFLLVQSMISLG*TAFWEE
Trigger: TTCCTCCCAGAAAGCCGTCAAACCAAGGGAAATCAT...GGATTGCACCAAAAGGAACAACAGAAGCACCGTATTTCGAATAGTGCCAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CAA 90 bp CCCAGATCCTTAAGATCTCGCCTTTCCAGATGCAAAAGTTCAGCCCCTCTGATGACAGTTATTGATTCTTaGGCACCATCATCTTTAGCT +
Preference number: 5 (lower is better)
Translates to: PRSLRSRLSRCKSSAPLMTVIDS*APSSLA
Trigger: AGCTAAAGATGATGGTGCCAAAGAATCAATAACTGT...CATCAGAGGGGCTGAACTTTTGCATCTGGAAAGGCGAGATCTTAAGGATCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGACAGGGAGGTTTTCTTaGCTGGCTGCCACAGCTGGA +
Preference number: 5 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLTGRFS*LAATAG
Trigger: TCCAGCTGTGGCAGCCAGCAAAGAAAACCTCCCTGT...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp TCCACTTGCACTGGGACTCCTTCGTCACCAAATATAGTGATTTTCACTGTACGGCAGATTATTCTGGTATaGAGCACAGGGAGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: STCTGTPSSPNIVIFTVRQIILV*STGRFS
Trigger: AGAAAACCTCCCTGTGCTCAATACCAGAATAATCTG...CCGTACAGTGAAAATCACTATATTTGGTGACGAAGGAGTCCCAGTGCAAGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CAA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCGCCAGTAACATTTTGTaGATAATCGAACTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: LPRNSTNMITPPTVECSFASNIL*IIELPA
Trigger: TGCTGGGAGTTCGATTATCAACAAAATGTTACTGGC...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CAA 90 bp CCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACTACCAAAGTTAAGAGCATGCTATCAAATATaGCTACAACTTCCAGGATCT +
Preference number: 5 (lower is better)
Translates to: PAKQQLPLCPISELPKLRACYQI*LQLPGS
Trigger: AGATCCTGGAAGTTGTAGCAATATTTGATAGCATGC...TCTTAACTTTGGTAGTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAAGCGACACCTCTTCTGTaGCCAAGTCAATGGCGTGAT +
Preference number: 5 (lower is better)
Translates to: KISSHRGASVVLTYLCRKATPLL*PSQWRD
Trigger: ATCACGCCATTGACTTGGCAACAGAAGAGGTGTCGC...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAAGCGACACCTCTTCTGTaGCCAAGTCAATGGCGTGAT +
Preference number: 5 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCEATPLL*PSQWRD
Trigger: ATCACGCCATTGACTTGGCAACAGAAGAGGTGTCGC...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACACCAAAAGACAGTGAATaGTGGCTGCGTCACATATCC +
Preference number: 5 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTPKDSE*WLRHIS
Trigger: GGATATGTGACGCAGCCACAATTCACTGTCTTTTGG...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACCAAAAGACAGTGAATaGTGGCTGCGTCACATATCC +
Preference number: 5 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPPKDSE*WLRHIS
Trigger: GGATATGTGACGCAGCCACAATTCACTGTCTTTTGG...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCAAAAGACAGTGAATaGTGGCTGCGTCACATATCC +
Preference number: 5 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQPKDSE*WLRHIS
Trigger: GGATATGTGACGCAGCCACAATTCACTGTCTTTTGG...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGTACAGCGCCTTCACATaGATGGCTATTTCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRYSAFT*MAISVA
Trigger: TGCCACTGAAATAGCCATCAATGTGAAGGCGCTGTA...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGTACAGCGCCTTCACATaGATGGCTATTTCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQYSAFT*MAISVA
Trigger: TGCCACTGAAATAGCCATCAATGTGAAGGCGCTGTA...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAATACAGCGCCTTCACATaGATGGCTATTTCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: SHRGASVVLTYLCRKLQEYSAFT*MAISVA
Trigger: TGCCACTGAAATAGCCATCAATGTGAAGGCGCTGTA...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCACAGAGTGTAAGGCATaGGATACTCGCTCTTCATGT +
Preference number: 5 (lower is better)
Translates to: TSLPRNSTNMITPPTVECTECKA*DTRSSC
Trigger: ACATGAAGAGCGAGTATCCAATGCCTTACACTCTGT...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CAA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACACAGAGTGTAAGGCATaGGATACTCGCTCTTCATGT +
Preference number: 5 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHTECKA*DTRSSC
Trigger: ACATGAAGAGCGAGTATCCAATGCCTTACACTCTGT...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAATATAGTCAGACATACTaGGTCAGGAATCCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: SHRGASVVLTYLCRKLQEYSQTY*VRNPSG
Trigger: CCCTGAGGGATTCCTGACCAAGTATGTCTGACTATA...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAAAGCTCCCAGGTAATATaGATGCTGCTGGCCCATGGA +
Preference number: 5 (lower is better)
Translates to: KISSHRGASVVLTYLCRKSSQVI*MLLAHG
Trigger: TCCATGGGCCAGCAGCATCAATATTACCTGGGAGCT...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGTGTCTGTTACTGACTTaGCTGACACCAGCACTGCCT +
Preference number: 5 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVCLLLT*LTPALP
Trigger: AGGCAGTGCTGGTGTCAGCAAAGTCAGTAACAGACA...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGCTCACGTGTGCCTaGTGTTTCTATCATATAAGG +
Preference number: 5 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMQLTCA*CFYHIR
Trigger: CCTTATATGATAGAAACACAAGGCACACGTGAGCTG...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTTTAAGAAAATCTCCTaGGTCTGCAGGGTATGGTCT +
Preference number: 5 (lower is better)
Translates to: SPTAKYQATEVLQWCLLIFKKIS*VCRVWS
Trigger: AGACCATACCCTGCAGACCAAGGAGATTTTCTTAAA...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTTTATCTTCTGTTGGTTaGCCCAGAGTGCACACATGC +
Preference number: 5 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSLSSVG*PRVHTC
Trigger: GCATGTGTGCACTCTGGGCAAACCAACAGAAGATAA...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTATCTTCTGTTGGTTaGCCCAGAGTGCACACATGC +
Preference number: 5 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDLSSVG*PRVHTC
Trigger: GCATGTGTGCACTCTGGGCAAACCAACAGAAGATAA...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTGCTGTTTATCTTCTGTaGGTTTGCCCAGAGTGCACA +
Preference number: 5 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSAVYLL*VCPECT
Trigger: TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGC...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGGCTGTTTATCTTCTGTaGGTTTGCCCAGAGTGCACA +
Preference number: 5 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQAVYLL*VCPECT
Trigger: TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGC...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAATTGAGCCTCCTCCTTTaGTGGACCTTGTACAAAGTC +
Preference number: 5 (lower is better)
Translates to: SHRGASVVLTYLCRKLQELSLLL*WTLYKV
Trigger: GACTTTGTACAAGGTCCACAAAAGGAGGAGGCTCAA...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTCAAGGCAGTGCCCTTaGGGAAAGATGTCTTTCATC +
Preference number: 5 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDSRQCP*GKMSFI
Trigger: GATGAAAGACATCTTTCCCAAAGGGCACTGCCTTGA...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGTTGTACTCTCCCAAATaGAGCAGATCCAGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQLYSPK*SRSSQA
Trigger: TGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACAA...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337343.9
ENST00000536612.3
CDS-3UTR CAA 90 bp GCAAATTGCAGTAAAGATTCCCTGACACCTGAAAATGCGACCTTTCACCTCACAGGTTGCTTCCACTTTTaGGCTCCTATGAATAACGCT +
Preference number: 5 (lower is better)
Translates to: ANCSKDSLTPENATFHLTGCFHF*APMNNA
Trigger: AGCGTTATTCATAGGAGCCAAAAAGTGGAAGCAACC...TGTGAGGTGAAAGGTCGCATTTTCAGGTGTCAGGGAATCTTTACTGCAATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611224.1
CDS GCA 90 bp CGAAGTTTGAAGTATCGCTTTTTCCACCTTTGGAAAGAACTGGTTTaGTTCAATAGCTGTCCCTCTTTAATACTGGTCTTGGTCCGGATC +
Preference number: 5 (lower is better)
Translates to: RSLKYRFFHLWKELV*FNSCPSLILVLVRI
Trigger: GATCCGGACCAAGACCAGTATTAAAGAGGGACAGCTATTGAAGCAAACCAGTTCTTTCCAAAGGTGGAAAAAGCGATACTTCAAACTTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CAA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTCGCTTTTTCCACCTTaGGAAAGAACTGGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHSLFPP*ERTGLL
Trigger: AAGCAAACCAGTTCTTTCCAAAGGTGGAAAAAGCGA...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CAA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCAAGGCAGTGTGTACCATaGTCTTACACCAAAGGCATT +
Preference number: 5 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPRQCVP*SYTKGI
Trigger: AATGCCTTTGGTGTAAGACAATGGTACACACTGCCT...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAAAGGCAGTGTGTACCATaGTCTTACACCAAAGGCATT +
Preference number: 5 (lower is better)
Translates to: SHRGASVVLTYLCRKLQERQCVP*SYTKGI
Trigger: AATGCCTTTGGTGTAAGACAATGGTACACACTGCCT...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTAGGATGGTATAAATCTTaGCAGGCAGTGTGTACCATT +
Preference number: 5 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLGWYKS*QAVCTI
Trigger: AATGGTACACACTGCCTGCAAAGATTTATACCATCC...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACCACAGAACGAAAATGTaGCTCTACAGAAACCATCGG +
Preference number: 5 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDHRTKM*LYRNHR
Trigger: CCGATGGTTTCTGTAGAGCAACATTTTCGTTCTGTG...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTCACAGAACGAAAATGTaGCTCTACAGAAACCATCGG +
Preference number: 5 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLHRTKM*LYRNHR
Trigger: CCGATGGTTTCTGTAGAGCAACATTTTCGTTCTGTG...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACTACCAAAGTTAAGATCTCCACTCTTAGAATaGACAAAAACCAATAGAGGA +
Preference number: 5 (lower is better)
Translates to: PAKQQLPLCPISELPKLRSPLLE*TKTNRG
Trigger: TCCTCTATTGGTTTTTGTCAATTCTAAGAGTGGAGA...TCTTAACTTTGGTAGTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTCACCTGTCCAACATTTaGGTACTGGCTCGTTCCAGT +
Preference number: 5 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLIHLSNI*VLARSS
Trigger: ACTGGAACGAGCCAGTACCAAAATGTTGGACAGGTG...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTGTTTCACATAGCGTCTaGGCAGAAGATATGACCACT +
Preference number: 5 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSVSHSV*AEDMTT
Trigger: AGTGGTCATATCTTCTGCCAAGACGCTATGTGAAAC...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp TCCACTTGCACTGGGACTCCTTCGTCACCAAATATAGTGATTTTCACTGTACGGTACGTCTTTTCTACTTaGGCAACGAAGTCCTTTACA +
Preference number: 5 (lower is better)
Translates to: STCTGTPSSPNIVIFTVRYVFST*ATKSFT
Trigger: TGTAAAGGACTTCGTTGCCAAAGTAGAAAAGACGTA...CCGTACAGTGAAAATCACTATATTTGGTGACGAAGGAGTCCCAGTGCAAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CAA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACAATGATTTCCCTTGGTTaGACGGCTTTCTGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTMISLG*TAFWEE
Trigger: TTCCTCCCAGAAAGCCGTCAAACCAAGGGAAATCAT...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTAGGGACAGAATCAGTTaGGGAATGGCCATAACTTGC +
Preference number: 5 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLRDRIS*GMAITC
Trigger: GCAAGTTATGGCCATTCCCAAACTGATTCTGTCCCT...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CCTGGAAGTAGGGAAGCTTTTGGTGGCAATTTGAGTTCATATGTCATTATACTCAGGGACAGAATCAGTTaGGGAATGGCCATAACTTGC +
Preference number: 5 (lower is better)
Translates to: PGSREAFGGNLSSYVIILRDRIS*GMAITC
Trigger: GCAAGTTATGGCCATTCCCAAACTGATTCTGTCCCT...GAGTATAATGACATATGAACTCAAATTGCCACCAAAAGCTTCCCTACTTCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CAA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTAGCCAGTAACATTTTGTaGATAATCGAACTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLASNIL*IIELPA
Trigger: TGCTGGGAGTTCGATTATCAACAAAATGTTACTGGC...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGCAACACGGCTATGCCTaGCAAGCTGGGAAGAGGAAT +
Preference number: 5 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLQHGYA*QAGKRN
Trigger: ATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTTG...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCAACAACTTCCAGGATCTaGTCATCAAAGGATGGTGCA +
Preference number: 5 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPTTSRI*SSKDGA
Trigger: TGCACCATCCTTTGATGACAAGATCCTGGAAGTTGT...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp TCATTATACAGCGCCTTCACATTGATGGCTATTTCAGTGGCAGTGTCTCTTGTAACAACTTCCAGGATCTaGTCATCAAAGGATGGTGCA +
Preference number: 5 (lower is better)
Translates to: SLYSAFTLMAISVAVSLVTTSRI*SSKDGA
Trigger: TGCACCATCCTTTGATGACAAGATCCTGGAAGTTGT...TACAAGAGACACTGCCACTGAAATAGCCATCAATGTGAAGGCGCTGTATAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CAA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTGCATGCTATCAAATATaGCTACAACTTCCAGGATCT +
Preference number: 5 (lower is better)
Translates to: RNSTNMITPPTVECSFQAACYQI*LQLPGS
Trigger: AGATCCTGGAAGTTGTAGCAATATTTGATAGCATGC...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CAA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCGCATGCTATCAAATATaGCTACAACTTCCAGGATCT +
Preference number: 5 (lower is better)
Translates to: LPRNSTNMITPPTVECSFACYQI*LQLPGS
Trigger: AGATCCTGGAAGTTGTAGCAATATTTGATAGCATGC...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CAA 90 bp CCTGGAAGTAGGGAAGCTTTTGGTGGCAATTTGAGTTCATATGTCATTATACTCCCAAAAGACAGTGAATaGTGGCTGCGTCACATATCC +
Preference number: 5 (lower is better)
Translates to: PGSREAFGGNLSSYVIILPKDSE*WLRHIS
Trigger: GGATATGTGACGCAGCCACAATTCACTGTCTTTTGG...GAGTATAATGACATATGAACTCAAATTGCCACCAAAAGCTTCCCTACTTCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CAA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACAGAGTGTAAGGCATaGGATACTCGCTCTTCATGT +
Preference number: 5 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRTECKA*DTRSSC
Trigger: ACATGAAGAGCGAGTATCCAATGCCTTACACTCTGT...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTCTGTTGTTCCTTTaGGTGCAATCCATAGGAGGT +
Preference number: 5 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPLLLFL*VQSIGG
Trigger: ACCTCCTATGGATTGCACCAAAAGGAACAACAGAAG...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAAAATACGGTGCTTCTGTaGTTCCTTTTGGTGCAATCC +
Preference number: 5 (lower is better)
Translates to: SHRGASVVLTYLCRKLQENTVLL*FLLVQS
Trigger: GGATTGCACCAAAAGGAACAACAGAAGCACCGTATT...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTACAAGAACAGCCACTaGCTTCCAAGGACTTTGTAT +
Preference number: 5 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHYKNSH*LPRTLY
Trigger: ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTA...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp TCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTTAAATCCCTTCTGTTaGGAAGATCGTGTCAGAAGT +
Preference number: 5 (lower is better)
Translates to: SPTAKYQATEVLQWCLLILNPFC*EDRVRS
Trigger: ACTTCTGACACGATCTTCCAAACAGAAGGGATTTAA...GATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTCCCATGGATCACATTTaGAGTAGCAATGATCTGCAC +
Preference number: 5 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLPMDHI*SSNDLH
Trigger: GTGCAGATCATTGCTACTCAAAATGTGATCCATGGG...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATTATTCCGGGGACCTTTaGAAGCCCTCGGACCTCACA +
Preference number: 5 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYYSGDL*KPSDLT
Trigger: TGTGAGGTCCGAGGGCTTCAAAAGGTCCCCGGAATA...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACAGTCCAGCTGTCTTaGATCTCTCTGTTCTCTACA +
Preference number: 5 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRTVQLS*ISLFST
Trigger: TGTAGAGAACAGAGAGATCAAAGACAGCTGGACTGT...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGACAGTCCAGCTGTCTTaGATCTCTCTGTTCTCTACA +
Preference number: 5 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQTVQLS*ISLFST
Trigger: TGTAGAGAACAGAGAGATCAAAGACAGCTGGACTGT...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACCACATCATAAACCCTaGTGTGGACTCCATCAAATG +
Preference number: 5 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPPHHKP*CGLHQM
Trigger: CATTTGATGGAGTCCACACAAGGGTTTATGATGTGG...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACAAACAACTGCTCTTCCTaGCTGTTTATCTTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTNNCSS*LFIFCW
Trigger: CCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTT...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAAAAGTGTCCAATCTTTaGAGCCTCCTCCTTTTGTGG +
Preference number: 5 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTKVSNL*SLLLLW
Trigger: CCACAAAAGGAGGAGGCTCAAAAGATTGGACACTTT...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTACGGATGAAGATATCTTaGTACTCTCCCAAATTGAGC +
Preference number: 5 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLRMKIS*YSPKLS
Trigger: GCTCAATTTGGGAGAGTACAAAGATATCTTCATCCG...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337343.9
ENST00000536612.3
CDS-3UTR CAA 90 bp GTGGCGATTCCAGCTGCAAAGGAACCCTGCCAACTAGCAAAGATTCTGTTTCATAATGGAGTGATGATCTaGAGAAATTCATTTCAGCAC +
Preference number: 5 (lower is better)
Translates to: VAIPAAKEPCQLAKILFHNGVMI*RNSFQH
Trigger: GTGCTGAAATGAATTTCTCAAGATCATCACTCCATT...ATGAAACAGAATCTTTGCTAGTTGGCAGGGTTCCTTTGCAGCTGGAATCGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CAA 90 bp CCAGCCAAGCAGCAACTTCCTCTGTGCCCCATTTCTGAACTACCAAAGTTAAGAAATGGAGTGATGATCTaGAGAAATTCATTTCAGCAC +
Preference number: 5 (lower is better)
Translates to: PAKQQLPLCPISELPKLRNGVMI*RNSFQH
Trigger: GTGCTGAAATGAATTTCTCAAGATCATCACTCCATT...TCTTAACTTTGGTAGTTCAGAAATGGGGCACAGAGGAAGTTGCTGCTTGGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGTCGCTTTTTCCACCTTaGGAAAGAACTGGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQSLFPP*ERTGLL
Trigger: AAGCAAACCAGTTCTTTCCAAAGGTGGAAAAAGCGA...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CAA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGTCGCTTTTTCCACCTTaGGAAAGAACTGGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRSLFPP*ERTGLL
Trigger: AAGCAAACCAGTTCTTTCCAAAGGTGGAAAAAGCGA...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CAA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCATTTACAGTTATTaGTTGCTCTCACTGCACATC +
Preference number: 5 (lower is better)
Translates to: TSLPRNSTNMITPPTVECSIYSY*LLSLHI
Trigger: GATGTGCAGTGAGAGCAACAAATAACTGTAAATGGA...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000627777.2
CDS-3UTR CAA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCCATTTACAGTTATTaGTTGCTCTCACTGCACATC +
Preference number: 5 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLSIYSY*LLSLHI
Trigger: GATGTGCAGTGAGAGCAACAAATAACTGTAAATGGA...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCGATAGATACTTTACATaGACCAAGTGGACATATTGG +
Preference number: 5 (lower is better)
Translates to: LPRNSTNMITPPTVECSFDRYFT*TKWTYW
Trigger: CCAATATGTCCACTTGGTCAATGTAAAGTATCTATC...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CAA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTGATAGATACTTTACATaGACCAAGTGGACATATTGG +
Preference number: 5 (lower is better)
Translates to: RNSTNMITPPTVECSFQADRYFT*TKWTYW
Trigger: CCAATATGTCCACTTGGTCAATGTAAAGTATCTATC...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CAA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCACTGTTTATTCAAGTaGAGCTTATCGATTTCTGAC +
Preference number: 5 (lower is better)
Translates to: LPRNSTNMITPPTVECSFHCLFK*SLSISD
Trigger: GTCAGAAATCGATAAGCTCAACTTGAATAAACAGTG...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CAA 90 bp AGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCCAAGCTGCATGTTCATCAGAATaGAGGATTTTTGTAAGATGC +
Preference number: 5 (lower is better)
Translates to: RNSTNMITPPTVECSFQAACSSE*RIFVRC
Trigger: GCATCTTACAAAAATCCTCAATTCTGATGAACATGC...AGCTTGGAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CAA 90 bp AGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGTTTCACATAGCGTCTaGGCAGAAGATATGACCACT +
Preference number: 5 (lower is better)
Translates to: SGAYLSMQKTTRTATCFQVSHSV*AEDMTT
Trigger: AGTGGTCATATCTTCTGCCAAGACGCTATGTGAAAC...TTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGGTTTCACATAGCGTCTaGGCAGAAGATATGACCACT +
Preference number: 5 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVVSHSV*AEDMTT
Trigger: AGTGGTCATATCTTCTGCCAAGACGCTATGTGAAAC...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATACGTCTTTTCTACTTaGGCAACGAAGTCCTTTACA +
Preference number: 5 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLYVFST*ATKSFT
Trigger: TGTAAAGGACTTCGTTGCCAAAGTAGAAAAGACGTA...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATATGATTTCCCTTGGTTaGACGGCTTTCTGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYMISLG*TAFWEE
Trigger: TTCCTCCCAGAAAGCCGTCAAACCAAGGGAAATCAT...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATAGGGACAGAATCAGTTaGGGAATGGCCATAACTTGC +
Preference number: 5 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYRDRIS*GMAITC
Trigger: GCAAGTTATGGCCATTCCCAAACTGATTCTGTCCCT...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAAAGGGACAGAATCAGTTaGGGAATGGCCATAACTTGC +
Preference number: 5 (lower is better)
Translates to: KISSHRGASVVLTYLCRKRDRIS*GMAITC
Trigger: GCAAGTTATGGCCATTCCCAAACTGATTCTGTCCCT...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTCAGATTATTCTGGTATaGAGCACAGGGAGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLQIILV*STGRFS
Trigger: AGAAAACCTCCCTGTGCTCAATACCAGAATAATCTG...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGGCCAGTAACATTTTGTaGATAATCGAACTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRASNIL*IIELPA
Trigger: TGCTGGGAGTTCGATTATCAACAAAATGTTACTGGC...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCTTTGCCAGTAACATTTaGTTGATAATCGAACTCCCA +
Preference number: 5 (lower is better)
Translates to: LPRNSTNMITPPTVECSFFASNI*LIIELP
Trigger: TGGGAGTTCGATTATCAACAAAATGTTACTGGCAAA...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CAA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATAGCATGGGCCAGTTCTaGCTCCAAAAGACAGTGAAT +
Preference number: 5 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYSMGQF*LQKTVN
Trigger: ATTCACTGTCTTTTGGAGCAAGAACTGGCCCATGCT...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTTACAGCGCCTTCACATaGATGGCTATTTCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLIYSAFT*MAISVA
Trigger: TGCCACTGAAATAGCCATCAATGTGAAGGCGCTGTA...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAACTTCTGTTGTTCCTTTaGGTGCAATCCATAGGAGGT +
Preference number: 5 (lower is better)
Translates to: SGAYLSMQKTTRTATCFQLLLFL*VQSIGG
Trigger: ACCTCCTATGGATTGCACCAAAAGGAACAACAGAAG...TTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAATACGGTGCTTCTGTaGTTCCTTTTGGTGCAATCC +
Preference number: 5 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVNTVLL*FLLVQS
Trigger: GGATTGCACCAAAAGGAACAACAGAAGCACCGTATT...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAATACAAGAACAGCCACTaGCTTCCAAGGACTTTGTAT +
Preference number: 5 (lower is better)
Translates to: SHRGASVVLTYLCRKLQEYKNSH*LPRTLY
Trigger: ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTA...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCATATTGTTATGCAGTaGCACAGTAGGAACATTCCA +
Preference number: 5 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMHIVMQ*HSRNIP
Trigger: TGGAATGTTCCTACTGTGCAACTGCATAACAATATG...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGGTATATAAATCTCAGTaGACACCTCAGGGAATTCCT +
Preference number: 5 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQVYKSQ*TPQGIP
Trigger: AGGAATTCCCTGAGGTGTCAACTGAGATTTATATAC...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGTTAAATCCCTTCTGTTaGGAAGATCGTGTCAGAAGT +
Preference number: 5 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMLNPFC*EDRVRS
Trigger: ACTTCTGACACGATCTTCCAAACAGAAGGGATTTAA...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTATGAGTTTCAGCTCATaGCTGGAGTTAGCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSMSFSS*LELAEE
Trigger: TTCTTCAGCTAACTCCAGCAATGAGCTGAAACTCAT...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACGACTTGACACAGAGGTaGCTATACAAAAGTCAATCA +
Preference number: 5 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHDLTQR*LYKSQS
Trigger: TGATTGACTTTTGTATAGCAACCTCTGTGTCAAGTC...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCAATTTTTGTATTAAGTaGGCCAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: TSLPRNSTNMITPPTVECNFCIK*ARLVSN
Trigger: GTTTGAGACCAGCCTGGCCAACTTAATACAAAAATT...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261491.9
CDS-3UTR CAA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACATTTAAGAAAATCTCCTaGGTCTGCAGGGTATGGTCT +
Preference number: 5 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTFKKIS*VCRVWS
Trigger: AGACCATACCCTGCAGACCAAGGAGATTTTCTTAAA...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CCTGCACAGCCATGCATAGACAAAGCATACAGAGAAAATTGCTCTCATTTAACAACTGTGAAAACAAACTaGGACTCTACCAGATGGGAG +
Preference number: 5 (lower is better)
Translates to: PAQPCIDKAYRENCSHLTTVKTN*DSTRWE
Trigger: CTCCCATCTGGTAGAGTCCAAGTTTGTTTTCACAGT...TGTTAAATGAGAGCAATTTTCTCTGTATGCTTTGTCTATGCATGGCTGTGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCGGATGAAGATATCTTaGTACTCTCCCAAATTGAGC +
Preference number: 5 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQRMKIS*YSPKLS
Trigger: GCTCAATTTGGGAGAGTACAAAGATATCTTCATCCG...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337343.9
ENST00000536612.3
CDS-3UTR CAA 90 bp ATGAAGATATCTTTGTACTCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTCGGATGAAGATATCTTaGTACTCTCCCAAATTGAGC +
Preference number: 5 (lower is better)
Translates to: MKISLYSPKLSRSSQAATRMKIS*YSPKLS
Trigger: GCTCAATTTGGGAGAGTACAAAGATATCTTCATCCG...AGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACAAAGATATCTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp CTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCTCCTTCATTACAAAGCAAAGGTaGGCCAAAGAAGATGCAAAA +
Preference number: 5 (lower is better)
Translates to: LPRNSTNMITPPTVECSFITKQR*AKEDAK
Trigger: TTTTGCATCTTCTTTGGCCAACCTTTGCTTTGTAAT...GAAGGAGCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS TCA 90 bp CTAAAGAGCCTTCAACAAAACACTTCAGCCACATCAAGACCACAGTaGCGTCTAGGTAAATTCCATTGCCCTTCTTCAAAAAGTACATCA +
Preference number: 5 (lower is better)
Translates to: LKSLQQNTSATSRPQ*RLGKFHCPSSKSTS
Trigger: TGATGTACTTTTTGAAGAAGGGCAATGGAATTTACCTAGACGTCACTGTGGTCTTGATGTGGCTGAAGTGTTTTGTTGAAGGCTCTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498255.6
CDS-3UTR CAA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATGTGCGGCCTCGAAGTTaGAAGTATCGCTTTTTCCAC +
Preference number: 5 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYVRPRS*KYRFFH
Trigger: GTGGAAAAAGCGATACTTCAAACTTCGAGGCCGCAC...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CAA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAAATGATCGTGAAGCTGTaGTTAGCATTTTTCGTGCTT +
Preference number: 5 (lower is better)
Translates to: SHRGASVVLTYLCRKLQEMIVKL*LAFFVL
Trigger: AAGCACGAAAAATGCTAACAACAGCTTCACGATCAT...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CAA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTATGATCGTGAAGCTGTaGTTAGCATTTTTCGTGCTT +
Preference number: 5 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLMIVKL*LAFFVL
Trigger: AAGCACGAAAAATGCTAACAACAGCTTCACGATCAT...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CAA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCAATGATCGTGAAGCTGTaGTTAGCATTTTTCGTGCTT +
Preference number: 5 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPMIVKL*LAFFVL
Trigger: AAGCACGAAAAATGCTAACAACAGCTTCACGATCAT...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS-3UTR CAA 90 bp GGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTTCCATTTACAGTTATTaGTTGCTCTCACTGCACATC +
Preference number: 5 (lower is better)
Translates to: GASVVLTYLCRKLQEQPLSIYSY*LLSLHI
Trigger: GATGTGCAGTGAGAGCAACAAATAACTGTAAATGGA...AAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCATCCATTTACAGTTATTaGTTGCTCTCACTGCACATC +
Preference number: 5 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPSIYSY*LLSLHI
Trigger: GATGTGCAGTGAGAGCAACAAATAACTGTAAATGGA...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACACAGAACGAAAATGTaGCTCTACAGAAACCATCGG +
Preference number: 5 (lower is better)
Translates to: KISSHRGASVVLTYLCRKHRTKM*LYRNHR
Trigger: CCGATGGTTTCTGTAGAGCAACATTTTCGTTCTGTG...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AAACAACTGCTCTTCCTTGCTGTTTATCTTCTGTTGGTTTGCCCAGAGTGCACATCTCCACTCTTAGAATaGACAAAAACCAATAGAGGA +
Preference number: 5 (lower is better)
Translates to: KQLLFLAVYLLLVCPECTSPLLE*TKTNRG
Trigger: TCCTCTATTGGTTTTTGTCAATTCTAAGAGTGGAGA...TGTGCACTCTGGGCAAACCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTCCACTCTTAGAATaGACAAAAACCAATAGAGGA +
Preference number: 5 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLSPLLE*TKTNRG
Trigger: TCCTCTATTGGTTTTTGTCAATTCTAAGAGTGGAGA...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp ACTTCTCTTCCAAGAAATAGCACCAATATGATTACACCTCCGACTGTGGAGTGCGCATGTTCATCAGAATaGAGGATTTTTGTAAGATGC +
Preference number: 5 (lower is better)
Translates to: TSLPRNSTNMITPPTVECACSSE*RIFVRC
Trigger: GCATCTTACAAAAATCCTCAATTCTGATGAACATGC...GCACTCCACAGTCGGAGGTGTAATCATATTGGTGCTATTTCTTGGAAGAGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000379274.6
ENST00000626247.2
ENST00000627777.2
CDS-3UTR CAA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTACGTCTTTTCTACTTaGGCAACGAAGTCCTTTACA +
Preference number: 5 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDYVFST*ATKSFT
Trigger: TGTAAAGGACTTCGTTGCCAAAGTAGAAAAGACGTA...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AATGGCGTGATGGATGTACAAATGGGTTCGGAGAACTGGTTTACCAGAATCACAACAGTTATTGATTCTTaGGCACCATCATCTTTAGCT +
Preference number: 5 (lower is better)
Translates to: NGVMDVQMGSENWFTRITTVIDS*APSSLA
Trigger: AGCTAAAGATGATGGTGCCAAAGAATCAATAACTGT...TGTGATTCTGGTAAACCAGTTCTCCGAACCCATTTGTACATCCATCACGCCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS-3UTR CAA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGAGGGACAGAATCAGTTaGGGAATGGCCATAACTTGC +
Preference number: 5 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLRDRIS*GMAITC
Trigger: GCAAGTTATGGCCATTCCCAAACTGATTCTGTCCCT...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGCAGATTATTCTGGTATaGAGCACAGGGAGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVQIILV*STGRFS
Trigger: AGAAAACCTCCCTGTGCTCAATACCAGAATAATCTG...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCAGATTATTCTGGTATaGAGCACAGGGAGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLQIILV*STGRFS
Trigger: AGAAAACCTCCCTGTGCTCAATACCAGAATAATCTG...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGTTTGCCAGTAACATTTaGTTGATAATCGAACTCCCA +
Preference number: 5 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMFASNI*LIIELP
Trigger: TGGGAGTTCGATTATCAACAAAATGTTACTGGCAAA...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGTTTGCCAGTAACATTTaGTTGATAATCGAACTCCCA +
Preference number: 5 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQFASNI*LIIELP
Trigger: TGGGAGTTCGATTATCAACAAAATGTTACTGGCAAA...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATACAACTTCCAGGATCTaGTCATCAAAGGATGGTGCA +
Preference number: 5 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYTTSRI*SSKDGA
Trigger: TGCACCATCCTTTGATGACAAGATCCTGGAAGTTGT...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAAACAACTTCCAGGATCTaGTCATCAAAGGATGGTGCA +
Preference number: 5 (lower is better)
Translates to: KISSHRGASVVLTYLCRKTTSRI*SSKDGA
Trigger: TGCACCATCCTTTGATGACAAGATCCTGGAAGTTGT...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACACAACTTCCAGGATCTaGTCATCAAAGGATGGTGCA +
Preference number: 5 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYTTSRI*SSKDGA
Trigger: TGCACCATCCTTTGATGACAAGATCCTGGAAGTTGT...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCAGCATGCTATCAAATATaGCTACAACTTCCAGGATCT +
Preference number: 5 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPACYQI*LQLPGS
Trigger: AGATCCTGGAAGTTGTAGCAATATTTGATAGCATGC...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACAGAGTGTAAGGCATaGGATACTCGCTCTTCATGT +
Preference number: 5 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLITECKA*DTRSSC
Trigger: ACATGAAGAGCGAGTATCCAATGCCTTACACTCTGT...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATAATACGGTGCTTCTGTaGTTCCTTTTGGTGCAATCC +
Preference number: 5 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYNTVLL*FLLVQS
Trigger: GGATTGCACCAAAAGGAACAACAGAAGCACCGTATT...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGTACAAGAACAGCCACTaGCTTCCAAGGACTTTGTAT +
Preference number: 5 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVYKNSH*LPRTLY
Trigger: ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTA...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACACATATTGTTATGCAGTaGCACAGTAGGAACATTCCA +
Preference number: 5 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTHIVMQ*HSRNIP
Trigger: TGGAATGTTCCTACTGTGCAACTGCATAACAATATG...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp GTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACCATATTGTTATGCAGTaGCACAGTAGGAACATTCCA +
Preference number: 5 (lower is better)
Translates to: VLTYLCRKLQEQPLASKDHIVMQ*HSRNIP
Trigger: TGGAATGTTCCTACTGTGCAACTGCATAACAATATG...GTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGGATGTATATCATTTGTaGATTATGGCACAGACACAC +
Preference number: 5 (lower is better)
Translates to: QQNIKPQRCFSGAYLSMQDVYHL*IMAQTH
Trigger: GTGTGTCTGTGCCATAATCAACAAATGATATACATC...CTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGATACGTATGCCTTaGGCTTTCAAAGATTTGATC +
Preference number: 5 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHLIRMP*AFKDLI
Trigger: GATCAAATCTTTGAAAGCCAAAGGCATACGTATCAA...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATCCCATGGATCACATTTaGAGTAGCAATGATCTGCAC +
Preference number: 5 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYPMDHI*SSNDLH
Trigger: GTGCAGATCATTGCTACTCAAAATGTGATCCATGGG...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTGACTTGACACAGAGGTaGCTATACAAAAGTCAATCA +
Preference number: 5 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSDLTQR*LYKSQS
Trigger: TGATTGACTTTTGTATAGCAACCTCTGTGTCAAGTC...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACACATCATATTACTGACTaGACACAGAGGTTGCTATAC +
Preference number: 5 (lower is better)
Translates to: PQRCFSGAYLSMQKTTRTHHITD*TQRLLY
Trigger: GTATAGCAACCTCTGTGTCAAGTCAGTAATATGATG...TGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGAATTTTTGTATTAAGTaGGCCAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQNFCIK*ARLVSN
Trigger: GTTTGAGACCAGCCTGGCCAACTTAATACAAAAATT...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp TTTCACCCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATTAAAGCAATTTTCTTaGGTAAACCCCTGCTTCACA +
Preference number: 5 (lower is better)
Translates to: FHPQQNIKPQRCFSGAYLLKQFS*VNPCFT
Trigger: TGTGAAGCAGGGGTTTACCAAAGAAAATTGCTTTAA...TAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGGGTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCAGCTCACGTGTGCCTaGTGTTTCTATCATATAAGG +
Preference number: 5 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYQLTCA*CFYHIR
Trigger: CCTTATATGATAGAAACACAAGGCACACGTGAGCTG...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACAAGAACTGTTCAAGTTaGCAATTCTCTCATCCTCAT +
Preference number: 5 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHKNCSS*QFSHPH
Trigger: ATGAGGATGAGAGAATTGCAAACTTGAACAGTTCTT...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp GAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACATGCAGAAAATGCTTTaGCTTACAAAATCCAAAGCC +
Preference number: 5 (lower is better)
Translates to: EVLQWCLLIYAENYKNSHMQKML*LTKSKA
Trigger: GGCTTTGGATTTTGTAAGCAAAAGCATTTTCTGCAT...GTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAAAAAAATGGTGAGGGTTaGTATGATGAAGGCCTGAAA +
Preference number: 5 (lower is better)
Translates to: SHRGASVVLTYLCRKLQEKNGEG*YDEGLK
Trigger: TTTCAGGCCTTCATCATACAAACCCTCACCATTTTT...TTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTAACAACTGCTCTTCCTaGCTGTTTATCTTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLNNCSS*LFIFCW
Trigger: CCAACAGAAGATAAACAGCAAGGAAGAGCAGTTGTT...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CCACAGCAAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGTACCAGATGGGAGCTTaGTCTTATTTTATCTGTATC +
Preference number: 5 (lower is better)
Translates to: PQQNIKPQRCFSGAYLSMYQMGA*SYFICI
Trigger: GATACAGATAAAATAAGACAAAGCTCCCATCTGGTA...CATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTTGCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp GGACAGGATAGATCTAGACATTCATGGGTCATTTCTTGTCAGCAAGAACAATATACTGTGAAAACAAACTaGGACTCTACCAGATGGGAG +
Preference number: 5 (lower is better)
Translates to: GQDRSRHSWVISCQQEQYTVKTN*DSTRWE
Trigger: CTCCCATCTGGTAGAGTCCAAGTTTGTTTTCACAGT...ATATTGTTCTTGCTGACAAGAAATGACCCATGAATGTCTAGATCTATCCTGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS TCA 90 bp TCGGTGCTGTTTAGTGCAATTGGAGGTATGATAGATACTTTACATTaGCCAAGTGGACATATTGGATGGTATAAATCTTTGCAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: SVLFSAIGGMIDTLH*PSGHIGWYKSLQAV
Trigger: CACTGCCTGCAAAGATTTATACCATCCAATATGTCCACTTGGTCAATGTAAAGTATCTATCATACCTCCAATTGCACTAAACAGCACCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000498255.6
ENST00000536612.3
ENST00000626247.2
ENST00000627777.2
ENST00000628433.2
CDS-3UTR CAA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCAGATAGATACTTTACATaGACCAAGTGGACATATTGG +
Preference number: 5 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPDRYFT*TKWTYW
Trigger: CCAATATGTCCACTTGGTCAATGTAAAGTATCTATC...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGCACTGTTTATTCAAGTaGAGCTTATCGATTTCTGAC +
Preference number: 5 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRHCLFK*SLSISD
Trigger: GTCAGAAATCGATAAGCTCAACTTGAATAAACAGTG...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCACTGTTTATTCAAGTaGAGCTTATCGATTTCTGAC +
Preference number: 5 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQHCLFK*SLSISD
Trigger: GTCAGAAATCGATAAGCTCAACTTGAATAAACAGTG...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGGCATGTTCATCAGAATaGAGGATTTTTGTAAGATGC +
Preference number: 5 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRACSSE*RIFVRC
Trigger: GCATCTTACAAAAATCCTCAATTCTGATGAACATGC...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGTACGTCTTTTCTACTTaGGCAACGAAGTCCTTTACA +
Preference number: 5 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVYVFST*ATKSFT
Trigger: TGTAAAGGACTTCGTTGCCAAAGTAGAAAAGACGTA...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATATGATTTCCCTTGGTTaGACGGCTTTCTGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYMISLG*TAFWEE
Trigger: TTCCTCCCAGAAAGCCGTCAAACCAAGGGAAATCAT...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp ATGAAGATATCTTTGTACTCTCCCAAATTGAGCAGATCCAGCCAAGCAGCAACTTTTGCCAGTAACATTTaGTTGATAATCGAACTCCCA +
Preference number: 5 (lower is better)
Translates to: MKISLYSPKLSRSSQAATFASNI*LIIELP
Trigger: TGGGAGTTCGATTATCAACAAAATGTTACTGGCAAA...AGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAGAGTACAAAGATATCTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS-3UTR CAA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGCTTCTGTTGTTCCTTTaGGTGCAATCCATAGGAGGT +
Preference number: 5 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLLLLFL*VQSIGG
Trigger: ACCTCCTATGGATTGCACCAAAAGGAACAACAGAAG...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGAATACGGTGCTTCTGTaGTTCCTTTTGGTGCAATCC +
Preference number: 5 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLNTVLL*FLLVQS
Trigger: GGATTGCACCAAAAGGAACAACAGAAGCACCGTATT...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGAATACAAGAACAGCCACTaGCTTCCAAGGACTTTGTAT +
Preference number: 5 (lower is better)
Translates to: LFRQCNRLRFLLPYYHCEYKNSH*LPRTLY
Trigger: ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTA...TTCACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp TGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGCATTTGAATGTCATATaGGCAGTACAATCACTGAGA +
Preference number: 5 (lower is better)
Translates to: WCLLIYAENYKNSHLLPRHLNVI*AVQSLR
Trigger: TCTCAGTGATTGTACTGCCAATATGACATTCAAATG...CCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACAGAAAGCACAGATATTaGCCCCACATCATAAACCCT +
Preference number: 5 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYRKHRY*PHIINP
Trigger: AGGGTTTATGATGTGGGGCAAATATCTGTGCTTTCT...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCAAAGAACTGTTCAAGTTaGCAATTCTCTCATCCTCAT +
Preference number: 5 (lower is better)
Translates to: RGASVVLTYLCRKLQEQPKNCSS*QFSHPH
Trigger: ATGAGGATGAGAGAATTGCAAACTTGAACAGTTCTT...TGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGATGCAGAAAATGCTTTaGCTTACAAAATCCAAAGCC +
Preference number: 5 (lower is better)
Translates to: HRGASVVLTYLCRKLQEQMQKML*LTKSKA
Trigger: GGCTTTGGATTTTGTAAGCAAAAGCATTTTCTGCAT...CTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AAGGAAGAAAGAGGCAAGGTCATAGACACTGACTCATCTTGCTTAGGAGTTAGTTACCAGATGGGAGCTTaGTCTTATTTTATCTGTATC +
Preference number: 5 (lower is better)
Translates to: KEERGKVIDTDSSCLGVSYQMGA*SYFICI
Trigger: GATACAGATAAAATAAGACAAAGCTCCCATCTGGTA...ACTAACTCCTAAGCAAGATGAGTCAGTGTCTATGACCTTGCCTCTTTCTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGATAGATACTTTACATaGACCAAGTGGACATATTGG +
Preference number: 5 (lower is better)
Translates to: SGAYLSMQKTTRTATCFQDRYFT*TKWTYW
Trigger: CCAATATGTCCACTTGGTCAATGTAAAGTATCTATC...TTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGTCTCCACTCTTAGAATaGACAAAAACCAATAGAGGA +
Preference number: 5 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVSPLLE*TKTNRG
Trigger: TCCTCTATTGGTTTTTGTCAATTCTAAGAGTGGAGA...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAACACTGTTTATTCAAGTaGAGCTTATCGATTTCTGAC +
Preference number: 5 (lower is better)
Translates to: SGAYLSMQKTTRTATCFQHCLFK*SLSISD
Trigger: GTCAGAAATCGATAAGCTCAACTTGAATAAACAGTG...TTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGCATGTTCATCAGAATaGAGGATTTTTGTAAGATGC +
Preference number: 5 (lower is better)
Translates to: SGAYLSMQKTTRTATCFQACSSE*RIFVRC
Trigger: GCATCTTACAAAAATCCTCAATTCTGATGAACATGC...TTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAATACGTCTTTTCTACTTaGGCAACGAAGTCCTTTACA +
Preference number: 5 (lower is better)
Translates to: KISSHRGASVVLTYLCRKYVFST*ATKSFT
Trigger: TGTAAAGGACTTCGTTGCCAAAGTAGAAAAGACGTA...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CTTCAGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTACAGTTATTGATTCTTaGGCACCATCATCTTTAGCT +
Preference number: 5 (lower is better)
Translates to: LQWCLLIYAENYKNSHLLTVIDS*APSSLA
Trigger: AGCTAAAGATGATGGTGCCAAAGAATCAATAACTGT...AAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGACAGTTATTGATTCTTaGGCACCATCATCTTTAGCT +
Preference number: 5 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVTVIDS*APSSLA
Trigger: AGCTAAAGATGATGGTGCCAAAGAATCAATAACTGT...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGTTTGCCAGTAACATTTaGTTGATAATCGAACTCCCA +
Preference number: 5 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVFASNI*LIIELP
Trigger: TGGGAGTTCGATTATCAACAAAATGTTACTGGCAAA...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AACATTTTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACGCATGCTATCAAATATaGCTACAACTTCCAGGATCT +
Preference number: 5 (lower is better)
Translates to: NILQFHCLDNAIVSDSSYACYQI*LQLPGS
Trigger: AGATCCTGGAAGTTGTAGCAATATTTGATAGCATGC...GTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAAAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATCATATTGTTATGCAGTaGCACAGTAGGAACATTCCA +
Preference number: 5 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYHIVMQ*HSRNIP
Trigger: TGGAATGTTCCTACTGTGCAACTGCATAACAATATG...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp AGTGGTGCTTACTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGATGTATATCATTTGTaGATTATGGCACAGACACAC +
Preference number: 5 (lower is better)
Translates to: SGAYLSMQKTTRTATCFQDVYHL*IMAQTH
Trigger: GTGTGTCTGTGCCATAATCAACAAATGATATACATC...TTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAGTAAGCACCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTACCATTGTGTTGATACGTATGCCTTaGGCTTTCAAAGATTTGATC +
Preference number: 5 (lower is better)
Translates to: HCLDNAIVSDSSYLITIVLIRMP*AFKDLI
Trigger: GATCAAATCTTTGAAAGCCAAAGGCATACGTATCAA...CACAATGGTAATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTTCTCCACTCTTAGAATaGACAAAAACCAATAGAGGA +
Preference number: 5 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLISPLLE*TKTNRG
Trigger: TCCTCTATTGGTTTTTGTCAATTCTAAGAGTGGAGA...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATGCATGTTCATCAGAATaGAGGATTTTTGTAAGATGC +
Preference number: 5 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYACSSE*RIFVRC
Trigger: GCATCTTACAAAAATCCTCAATTCTGATGAACATGC...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATACAGTTATTGATTCTTaGGCACCATCATCTTTAGCT +
Preference number: 5 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYTVIDS*APSSLA
Trigger: AGCTAAAGATGATGGTGCCAAAGAATCAATAACTGT...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATCAGATTATTCTGGTATaGAGCACAGGGAGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYQIILV*STGRFS
Trigger: AGAAAACCTCCCTGTGCTCAATACCAGAATAATCTG...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000536612.3
CDS-3UTR CAA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGGTATATAAATCTCAGTaGACACCTCAGGGAATTCCT +
Preference number: 5 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLVYKSQ*TPQGIP
Trigger: AGGAATTCCCTGAGGTGTCAACTGAGATTTATATAC...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp CTTATCTATGCAGAAAACTACAAGAACAGCCACTTGCTTCCAAGGACTTTGTATATCACACTCTTAAATTaGGGACACATCATAGCTAGA +
Preference number: 5 (lower is better)
Translates to: LIYAENYKNSHLLPRTLYITLLN*GHIIAR
Trigger: TCTAGCTATGATGTGTCCCAAATTTAAGAGTGTGAT...ATACAAAGTCCTTGGAAGCAAGTGGCTGTTCTTGTAGTTTTCTGCATAGATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAAATCACACTCTTAAATTaGGGACACATCATAGCTAGA +
Preference number: 5 (lower is better)
Translates to: KISSHRGASVVLTYLCRKITLLN*GHIIAR
Trigger: TCTAGCTATGATGTGTCCCAAATTTAAGAGTGTGAT...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATATGAGTTTCAGCTCATaGCTGGAGTTAGCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYMSFSS*LELAEE
Trigger: TTCTTCAGCTAACTCCAGCAATGAGCTGAAACTCAT...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGCATCATATTACTGACTaGACACAGAGGTTGCTATAC +
Preference number: 5 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLHHITD*TQRLLY
Trigger: GTATAGCAACCTCTGTGTCAAGTCAGTAATATGATG...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTCATTTGAATGTCATATaGGCAGTACAATCACTGAGA +
Preference number: 5 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLIHLNVI*AVQSLR
Trigger: TCTCAGTGATTGTACTGCCAATATGACATTCAAATG...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AAAATATCAAGCCACAGAGGTGCTTCAGTGGTGCTTACTTATCTATGCAGAAAATTAAAGCAATTTTCTTaGGTAAACCCCTGCTTCACA +
Preference number: 5 (lower is better)
Translates to: KISSHRGASVVLTYLCRKLKQFS*VNPCFT
Trigger: TGTGAAGCAGGGGTTTACCAAAGAAAATTGCTTTAA...TTTTCTGCATAGATAAGTAAGCACCACTGAAGCACCTCTGTGGCTTGATATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATAGAAAGCACAGATATTaGCCCCACATCATAAACCCT +
Preference number: 5 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYRKHRY*PHIINP
Trigger: AGGGTTTATGATGTGGGGCAAATATCTGTGCTTTCT...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp GAAAATATCCAGAGAATTTTCTTAACGTGCACGCCTACTGCTTATGATAGATTGAAAAATGGTGAGGGTTaGTATGATGAAGGCCTGAAA +
Preference number: 5 (lower is better)
Translates to: ENIQRIFLTCTPTAYDRLKNGEG*YDEGLK
Trigger: TTTCAGGCCTTCATCATACAAACCCTCACCATTTTT...CAATCTATCATAAGCAGTAGGCGTGCACGTTAAGAAAATTCTCTGGATATTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp TTGCAATTCCACTGTTTAGACAATGCAATCGTCTCAGATTCCTCCTACCTTATTAATGGAGTGATGATCTaGAGAAATTCATTTCAGCAC +
Preference number: 5 (lower is better)
Translates to: LQFHCLDNAIVSDSSYLINGVMI*RNSFQH
Trigger: GTGCTGAAATGAATTTCTCAAGATCATCACTCCATT...AATAAGGTAGGAGGAATCTGAGACGATTGCATTGTCTAAACAGTGGAATTGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536612.3
CDS-3UTR CAA 90 bp GCACTAGGAGTTGGAGGTGATACCAATCTACATTCAAATCACAACTTAATTTATATGTTGACAGCCCAGTaGGAGATAGAAGATGTTTTA +
Preference number: 5 (lower is better)
Translates to: ALGVGGDTNLHSNHNLIYMLTAQ*EIEDVL
Trigger: TAAAACATCTTCTATCTCCAACTGGGCTGTCAACAT...ATAAATTAAGTTGTGATTTGAATGTAGATTGGTATCACCTCCAACTCCTAGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261491.9
ENST00000337343.9
CDS-3UTR CAA 90 bp AACCTTTTCCTTTTTAAACTTTGGCACTATTCGAAATACGGTGCTTCTGTTGTTCACTGTTTATTCAAGTaGAGCTTATCGATTTCTGAC +
Preference number: 5 (lower is better)
Translates to: NLFLFKLWHYSKYGASVVHCLFK*SLSISD
Trigger: GTCAGAAATCGATAAGCTCAACTTGAATAAACAGTG...AACAACAGAAGCACCGTATTTCGAATAGTGCCAAAGTTTAAAAAGGAAAAGGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS GCA 72 bp AACTCAGCCGCACTCCAGCTACGCTCCAGGGCAAGCTaGGCCGGGCACCGTTTCTTCCTTGTGACGTTCAAA +
Preference number: 6 (lower is better)
Translates to: NSAALQLRSRAS*AGHRFFLVTFK
Trigger: TTTGAACGTCACAAGGAAGAAACGGTGCCCGGCGCAGCTTGCCCTGGAGCGTAGCTGGAGTGCGGCTGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379274.6
CDS CAA 72 bp CTGGTCTTGGTCCGGATCTGCCCCGAGGTAGACACTTaGCGGATCAGTTTCTGGGGTCCCTCTTGCTCCGCT +
Preference number: 6 (lower is better)
Translates to: LVLVRICPEVDT*RISFWGPSCSA
Trigger: AGCGGAGCAAGAGGGACCCCAGAAACTGATCCGCAAAGTGTCTACCTCGGGGCAGATCCGGACCAAGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS GCA 72 bp GTAGACACTTTGCGGATCAGTTTCTGGGGTCCCTCTTaGTCCGCTTCGCTGTCAGACGAATCCTCTCCCGGC +
Preference number: 6 (lower is better)
Translates to: VDTLRISFWGPS*SASLSDESSPG
Trigger: GCCGGGAGAGGATTCGTCTGACAGCGAAGCGGAGCAAGAGGGACCCCAGAAACTGATCCGCAAAGTGTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000611224.1
CDS CAA 72 bp GGTAGACACTTTGCGGATCAGTTTCTGGGGTCCCTCTaGCTCCGCTTCGCTGTCAGACGAATCCTCTCCCGG +
Preference number: 6 (lower is better)
Translates to: GRHFADQFLGSL*LRFAVRRILSR
Trigger: CCGGGAGAGGATTCGTCTGACAGCGAAGCGGAGCAAGAGGGACCCCAGAAACTGATCCGCAAAGTGTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000611224.1
CDS CAA 72 bp AAACCCTTGGTCCGGATCTGCCCCGAGGTAGACACTTaGCGGATCAGTTTCTGGGGTCCCTCTTGCTCCGCT +
Preference number: 6 (lower is better)
Translates to: KPLVRICPEVDT*RISFWGPSCSA
Trigger: AGCGGAGCAAGAGGGACCCCAGAAACTGATCCGCAAAGTGTCTACCTCGGGGCAGATCCGGACCAAGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611224.1
CDS CCA 72 bp ATCTGCCCCGAGGTAGACACTTTGCGGATCAGTTTCTaGGGTCCCTCTTGCTCCGCTTCGCTGTCAGACGAA +
Preference number: 6 (lower is better)
Translates to: ICPEVDTLRISF*GPSCSASLSDE
Trigger: TTCGTCTGACAGCGAAGCGGAGCAAGAGGGACCCCAGAAACTGATCCGCAAAGTGTCTACCTCGGGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000611224.1
CDS CAA 90 bp AACATGATGAAACCCTTGGTCCGGATCTGCCCCGAGGTAGACACTTaGCGGATCAGTTTCTGGGGTCCCTCTTGCTCCGCTTCGCTGTCA +
Preference number: 6 (lower is better)
Translates to: NMMKPLVRICPEVDT*RISFWGPSCSASLS
Trigger: TGACAGCGAAGCGGAGCAAGAGGGACCCCAGAAACTGATCCGCAAAGTGTCTACCTCGGGGCAGATCCGGACCAAGGGTTTCATCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611224.1
CDS CAA 90 bp TCTTTAATACTGGTCTTGGTCCGGATCTGCCCCGAGGTAGACACTTaGCGGATCAGTTTCTGGGGTCCCTCTTGCTCCGCTTCGCTGTCA +
Preference number: 6 (lower is better)
Translates to: SLILVLVRICPEVDT*RISFWGPSCSASLS
Trigger: TGACAGCGAAGCGGAGCAAGAGGGACCCCAGAAACTGATCCGCAAAGTGTCTACCTCGGGGCAGATCCGGACCAAGACCAGTATTAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS TCA 72 bp TTGGCACTTACAGGCAGGTTGCCCTCAAGCCACTGGTaGGGCATCGCGACGCCATCTTCATCTTCTATAATG +
Preference number: 6 (lower is better)
Translates to: LALTGRLPSSHW*GIATPSSSSIM
Trigger: CATTATAGAAGATGAAGATGGCGTCGCGATGCCTCACCAGTGGCTTGAGGGCAACCTGCCTGTAAGTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000498255.6
ENST00000536612.3
ENST00000627777.2
ENST00000628433.2
CDS CAA 90 bp TTGCCTGGGCAGATTATTCTGGTATTGAGCACAGGGAGGTTTTCTTaGCTGGCTGCCACAGCTGGACCAGGGACAGAATCAGTTTGGGAA +
Preference number: 6 (lower is better)
Translates to: LPGQIILVLSTGRFS*LAATAGPGTESVWE
Trigger: TTCCCAAACTGATTCTGTCCCTGGTCCAGCTGTGGCAGCCAGCAAAGAAAACCTCCCTGTGCTCAATACCAGAATAATCTGCCCAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498255.6
CDS TCA 72 bp CGTAGGGTTCTCTGGTCTGTACAGACTTCAGTGAGCTaGTCCAATCCTCCATCTCCTTTCTGTTCTCAGCAC +
Preference number: 6 (lower is better)
Translates to: RRVLWSVQTSVS*SNPPSPFCSQH
Trigger: GTGCTGAGAACAGAAAGGAGATGGAGGATTGGATCAGCTCACTGAAGTCTGTACAGACCAGAGAACCCTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000498255.6
ENST00000536612.3
ENST00000626247.2
ENST00000627777.2
ENST00000628433.2
CDS TCA 72 bp CACCTCGTAGGGTTCTCTGGTCTGTACAGACTTCAGTaGGCTGATCCAATCCTCCATCTCCTTTCTGTTCTC +
Preference number: 6 (lower is better)
Translates to: HLVGFSGLYRLQ*ADPILHLLSVL
Trigger: GAGAACAGAAAGGAGATGGAGGATTGGATCAGCTCACTGAAGTCTGTACAGACCAGAGAACCCTACGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000498255.6
ENST00000536612.3
ENST00000626247.2
ENST00000627777.2
ENST00000628433.2
CDS GCA 72 bp ACCAAAGGCATTTCCAATCCTGTAGACGGAGAACACTaGCACATGTTTTGTCGCAGACAGCACACTTGGCAC +
Preference number: 6 (lower is better)
Translates to: TKGISNPVDGEH*HMFCRRQHTWH
Trigger: GTGCCAAGTGTGCTGTCTGCGACAAAACATGTGGCAGTGTTCTCCGTCTACAGGATTGGAAATGCCTTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000498255.6
ENST00000536612.3
ENST00000627777.2
ENST00000628433.2
CDS TCA 72 bp CTGAGAAATCATTGCCTGGGCAGATTATTCTGGTATTaGGCACAGGGAGGTTTTCTTTGCTGGCTGCCACAG +
Preference number: 6 (lower is better)
Translates to: LRNHCLGRLFWY*AQGGFLCWLPQ
Trigger: CTGTGGCAGCCAGCAAAGAAAACCTCCCTGTGCTCAATACCAGAATAATCTGCCCAGGCAATGATTTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498255.6
CDS CAA 90 bp CTTGTCATATCTGAGAAATCATTGCCTGGGCAGATTATTCTGGTATaGAGCACAGGGAGGTTTTCTTTGCTGGCTGCCACAGCTGGACCA +
Preference number: 6 (lower is better)
Translates to: LVISEKSLPGQIILV*STGRFSLLAATAGP
Trigger: TGGTCCAGCTGTGGCAGCCAGCAAAGAAAACCTCCCTGTGCTCAATACCAGAATAATCTGCCCAGGCAATGATTTCTCAGATATGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498255.6
CDS GCA 72 bp ATTGACCAAGTGGACATATTGGATGGTATAAATCTTTaGAGGCAGTGTGTACCTTCGCAGGACAGGCCATGG +
Preference number: 6 (lower is better)
Translates to: IDQVDILDGINL*RQCVPSQDRPW
Trigger: CCATGGCCTGTCCTGCGAAGGTACACACTGCCTGCAAAGATTTATACCATCCAATATGTCCACTTGGTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626247.2
CDS CAA 72 bp TCTGAGAAATCATTGCCTGGGCAGATTATTCTGGTATaGAGCACAGGGAGGTTTTCTTTGCTGGCTGCCACA +
Preference number: 6 (lower is better)
Translates to: SEKSLPGQIILV*STGRFSLLAAT
Trigger: TGTGGCAGCCAGCAAAGAAAACCTCCCTGTGCTCAATACCAGAATAATCTGCCCAGGCAATGATTTCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498255.6
CDS TCA 72 bp CCAAGCTCTTTAATTCCCTGGAGAATTCGCTTCACATaGCCCACTTTCGGTATCCCCAGATCCATATGTTTA +
Preference number: 6 (lower is better)
Translates to: PSSLIPWRIRFT*PTFGIPRSICL
Trigger: TAAACATATGGATCTGGGGATACCGAAAGTGGGTCATGTGAAGCGAATTCTCCAGGGAATTAAAGAGCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536612.3
CDS CCA 72 bp GTGATGATCCTTAAATACAGCCAGCCAAAAGTCACATaGAAGAGGAGCACCAATCAGTCAGCTCTGGATATT +
Preference number: 6 (lower is better)
Translates to: VMILKYSQPKVT*KRSTNQSALDI
Trigger: AATATCCAGAGCTGACTGATTGGTGCTCCTCTTCCATGTGACTTTTGGCTGGCTGTATTTAAGGATCATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498255.6
CDS TCA 72 bp TTACAGTTATTTGTTGCTCTCACTGCACATCTTTTGTaGGCCTTGAATTTACACACTTCGCAGGACAGGCCA +
Preference number: 6 (lower is better)
Translates to: LQLFVALTAHLL*ALNLHTSQDRP
Trigger: TGGCCTGTCCTGCGAAGTGTGTAAATTCAAGGCTCACAAAAGATGTGCAGTGAGAGCAACAAATAACTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000498255.6
ENST00000536612.3
ENST00000627777.2
ENST00000628433.2
CDS TCA 72 bp CTCTTCATGAGACAAGCCATTGTCTTTTACAGAGTTTaGGGCTTTAGTCTGCACCACAAAAAGGGACCAGAA +
Preference number: 6 (lower is better)
Translates to: LFMRQAIVFYRV*GFSLHHKKGPE
Trigger: TTCTGGTCCCTTTTTGTGGTGCAGACTAAAGCCTCAAACTCTGTAAAAGACAATGGCTTGTCTCATGAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498255.6
CDS GCA 72 bp TCGGTGAAGTCCAATTTATTTGTCTTTTGTGGCGTGTaGTTGTCATATCTGAGAAATCATTGCCTGGGCAGA +
Preference number: 6 (lower is better)
Translates to: SVKSNLFVFCGV*LSYLRNHCLGR
Trigger: TCTGCCCAGGCAATGATTTCTCAGATATGACAAGCACACGCCACAAAAGACAAATAAATTGGACTTCACCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498255.6
CDS CCA 72 bp AATTTCTACATGCTCAATGCATTACAAAGCAAAGGTTaGCCAAAGAAGATGCAAAACAGAGTGCAGCGGCAG +
Preference number: 6 (lower is better)
Translates to: NFYMLNALQSKG*PKKMQNRVQRQ
Trigger: CTGCCGCTGCACTCTGTTTTGCATCTTCTTTGGCCAACCTTTGCTTTGTAATGCATTGAGCATGTAGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627777.2
CDS CAA 72 bp GCACACAGCATTAGCCTTCTGAATGGAGTGATGATCTaGAGAAATTCATTTCAGCACCTAAAGCTGAGTCTG +
Preference number: 6 (lower is better)
Translates to: AHSISLLNGVMI*RNSFQHLKLSL
Trigger: CAGACTCAGCTTTAGGTGCTGAAATGAATTTCTCAAGATCATCACTCCATTCAGAAGGCTAATGCTGTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536612.3
ENST00000626247.2
ENST00000627777.2
ENST00000628433.2
CDS GCA 72 bp ATTGACCAAGTGGACATATTGGATGGTATAAATCTTTaGAGGCAGTGTGTACCATTGTCTTACACCAAAGGC +
Preference number: 6 (lower is better)
Translates to: IDQVDILDGINL*RQCVPLSYTKG
Trigger: GCCTTTGGTGTAAGACAATGGTACACACTGCCTGCAAAGATTTATACCATCCAATATGTCCACTTGGTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
ENST00000498255.6
ENST00000536612.3
ENST00000627777.2
ENST00000628433.2
CDS GCA 72 bp AAGTATCGCTTTTTCCACCTTTGGAAAGAACTGGTTTaGTTCAATAGCTGTCCCTCTTTAATACTGGTCTTG +
Preference number: 6 (lower is better)
Translates to: KYRFFHLWKELV*FNSCPSLILVL
Trigger: CAAGACCAGTATTAAAGAGGGACAGCTATTGAAGCAAACCAGTTCTTTCCAAAGGTGGAAAAAGCGATACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261491.9
ENST00000337343.9
ENST00000379274.6
CDS CAA 72 bp GTGAAGTCCAATTTATTTGTCTTTTGTGGCGTGTGCTaGTCATATCTGAGAAATCATTGCCTGGGCAGATTA +
Preference number: 6 (lower is better)
Translates to: VKSNLFVFCGVC*SYLRNHCLGRL
Trigger: TAATCTGCCCAGGCAATGATTTCTCAGATATGACAAGCACACGCCACAAAAGACAAATAAATTGGACTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498255.6
CDS CAA 90 bp TTCATTTCGGTGAAGTCCAATTTATTTGTCTTTTGTGGCGTGTGCTaGTCATATCTGAGAAATCATTGCCTGGGCAGATTATTCTGGTAT +
Preference number: 6 (lower is better)
Translates to: FISVKSNLFVFCGVC*SYLRNHCLGRLFWY
Trigger: ATACCAGAATAATCTGCCCAGGCAATGATTTCTCAGATATGACAAGCACACGCCACAAAAGACAAATAAATTGGACTTCACCGAAATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498255.6
CDS TCA 72 bp ATTTATTTGTCTTTTGTGGCGTGTGCTTGTCATATCTaGGAAATCATTGCCTGGGCAGATTATTCTGGTATT +
Preference number: 6 (lower is better)
Translates to: IYLSFVACACHI*EIIAWADYSGI
Trigger: AATACCAGAATAATCTGCCCAGGCAATGATTTCTCAGATATGACAAGCACACGCCACAAAAGACAAATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498255.6
CDS CCA 72 bp ATTCATTTCGGTGAAGTCCAATTTATTTGTCTTTTGTaGCGTGTGCTTGTCATATCTGAGAAATCATTGCCT +
Preference number: 6 (lower is better)
Translates to: IHFGEVQFICLL*RVLVISEKSLP
Trigger: AGGCAATGATTTCTCAGATATGACAAGCACACGCCACAAAAGACAAATAAATTGGACTTCACCGAAATGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498255.6
CDS CAA 90 bp AAAAGTCACATGGAAGAGGAGCACCAATCAGTCAGCTCTGGATATTaGTTAATTGCATATGAAATTGAAGAGAACCTCACTTTTGCATTT +
Preference number: 6 (lower is better)
Translates to: KSHMEEEHQSVSSGY*LIAYEIEENLTFAF
Trigger: AAATGCAAAAGTGAGGTTCTCTTCAATTTCATATGCAATTAACAAATATCCAGAGCTGACTGATTGGTGCTCCTCTTCCATGTGACTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498255.6
CDS TCA 72 bp ATAGTGTCCTTTGAATCACAAAACTATTCATTTCGGTaGAGTCCAATTTATTTGTCTTTTGTGGCGTGTGCT +
Preference number: 6 (lower is better)
Translates to: IVSFESQNYSFR*SPIYLSFVACA
Trigger: AGCACACGCCACAAAAGACAAATAAATTGGACTTCACCGAAATGAATAGTTTTGTGATTCAAAGGACACTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498255.6