RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DGKG (Homo sapiens)

Ensembl gene IDs: ENSG00000058866

Ensembl transcript IDs: ENST00000265022.8, ENST00000344484.8, ENST00000382164.8, ENST00000437018.2, ENST00000447054.5, ENST00000466466.1, ENST00000472506.1, ENST00000480809.5, ENST00000480933.1, ENST00000482566.1, ENST00000490452.5

Found 752 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGCCTTGCCCTTGGGAAAGGATGGTAATGCTGGCACTTGCTGAATaGAGCCCACTGAGCTCTGCTGAGACCCCTCTGTCCTGGCTGGCA +
Preference number: 1 (lower is better)
Translates to: WPCPWERMVMLALAE*SPLSSAETPLSWLA
Trigger: TGCCAGCCAGGACAGAGGGGTCTCAGCAGAGCTCAGTGGGCTTCATTCAGCAAGTGCCAGCATTACCATCCTTTCCCAAGGGCAAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR GCA 90 bp CCCTTGGCCACATCTGATCTCACCATAGGCAGGAAACCTGCAGCCTaGTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAA +
Preference number: 1 (lower is better)
Translates to: PLATSDLTIGRKPAA*SSRASMRKLAGLVE
Trigger: TTCTACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTCCTGCCTATGGTGAGATCAGATGTGGCCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR GCA 90 bp CGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATaGTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACT +
Preference number: 1 (lower is better)
Translates to: RPRNQRAPAEPCQGL*SESRRPFCLCTEGT
Trigger: AGTTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR GCA 90 bp CCACTGAGCTCTGCTGAGACCCCTCTGTCCTGGCTGGCAGTATCTTaGAGAAGACGCCTCAGTCCTTCTTGTGACTCTCCACTGAGGTCA +
Preference number: 1 (lower is better)
Translates to: PLSSAETPLSWLAVS*RRRLSPSCDSPLRS
Trigger: TGACCTCAGTGGAGAGTCACAAGAAGGACTGAGGCGTCTTCTGCAAGATACTGCCAGCCAGGACAGAGGGGTCTCAGCAGAGCTCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR TCA 90 bp TTGTGCAAATTCTCTGGAACCAGAGCTCCTTCCCTTGGCCACATCTaGTCTCACCATAGGCAGGAAACCTGCAGCCTGCTCCTCGCGAGC +
Preference number: 1 (lower is better)
Translates to: LCKFSGTRAPSLGHI*SHHRQETCSLLLAS
Trigger: GCTCGCGAGGAGCAGGCTGCAGGTTTCCTGCCTATGGTGAGATCAGATGTGGCCAAGGGAAGGAGCTCTGGTTCCAGAGAATTTGCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR GCA 90 bp CAGGAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTaGAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCAGTCTCAGA +
Preference number: 1 (lower is better)
Translates to: QETCSLLLASVHEET*RAGRKKGGFPFSLR
Trigger: TCTGAGACTGAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR GCA 90 bp TCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTaGCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGT +
Preference number: 1 (lower is better)
Translates to: SLKGRPRNQRAPAEP*QGLCSESRRPFCLC
Trigger: ACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR TCA 90 bp GTCCTGGCTGGCAGTATCTTGCAGAAGACGCCTCAGTCCTTCTTGTaGCTCTCCACTGAGGTCATCCCTGCAGCCAAGGTTGTTTCCAAA +
Preference number: 1 (lower is better)
Translates to: VLAGSILQKTPQSFL*LSTEVIPAAKVVSK
Trigger: TTTGGAAACAACCTTGGCTGCAGGGATGACCTCAGTGGAGAGTCACAAGAAGGACTGAGGCGTCTTCTGCAAGATACTGCCAGCCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR GCA 90 bp AAGACCATCAGAAGGTCCTTCAGGTCATACTCTGGGAGTGGTGAGTaGAAAGAAGCAGGAGGGAACCGTCTCCTGGTTTCCCCAGCAAAG +
Preference number: 1 (lower is better)
Translates to: KTIRRSFRSYSGSGE*KEAGGNRLLVSPAK
Trigger: CTTTGCTGGGGAAACCAGGAGACGGTTCCCTCCTGCTTCTTTGCACTCACCACTCCCAGAGTATGACCTGAAGGACCTTCTGATGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR GCA 90 bp ATGAGGCGCTCGTTTTCTTGTGTGGGGATATCCCATCCACGCATGTaGTGTACGTTTGTTCCTCCCTGGCAACCTGGATCCAAGTGGACT +
Preference number: 1 (lower is better)
Translates to: MRRSFSCVGISHPRM*CTFVPPWQPGSKWT
Trigger: AGTCCACTTGGATCCAGGTTGCCAGGGAGGAACAAACGTACAGCACATGCGTGGATGGGATATCCCCACACAAGAAAACGAGCGCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR TCA 90 bp GTCCAAGTTTCCACTGATAAATCTCAGAGAGGGATGGAGGCCCAATaGAGCTCTGCATGGCCTTGCCCTTGGGAAAGGATGGTAATGCTG +
Preference number: 1 (lower is better)
Translates to: VQVSTDKSQRGMEAQ*SSAWPCPWERMVML
Trigger: CAGCATTACCATCCTTTCCCAAGGGCAAGGCCATGCAGAGCTTCATTGGGCCTCCATCCCTCTCTGAGATTTATCAGTGGAAACTTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR GCA 90 bp AAGAAGGACTTGGGATATGTCTCTCAAGCAACATTGCAAGTCCTGTaGACTAGGGTGCAGCAGGTAAGGGCCATTTTCTGCACTGCCCCT +
Preference number: 1 (lower is better)
Translates to: KKDLGYVSQATLQVL*TRVQQVRAIFCTAP
Trigger: AGGGGCAGTGCAGAAAATGGCCCTTACCTGCTGCACCCTAGTGCACAGGACTTGCAATGTTGCTTGAGAGACATATCCCAAGTCCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR CCA 90 bp GCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATaGCAAGGTGACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACT +
Preference number: 1 (lower is better)
Translates to: ALALLGVYPLLKQNV*QGDVFFPKGGFAST
Trigger: AGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGTCACCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR CCA 90 bp ACCCTTGTGATCACCACAGGGAGATGCGTCCTGACAATGAAACGGTaGAGTGGGGGAGTGAGAACCTTCTTTTTCCTTACCACTTTCTGT +
Preference number: 1 (lower is better)
Translates to: TLVITTGRCVLTMKR*SGGVRTFFFLTTFC
Trigger: ACAGAAAGTGGTAAGGAAAAAGAAGGTTCTCACTCCCCCACTCCACCGTTTCATTGTCAGGACGCATCTCCCTGTGGTGATCACAAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR CCA 90 bp CGCATGTGCTGTACGTTTGTTCCTCCCTGGCAACCTGGATCCAAGTaGACTCACTTTTCAGTGACCAGAAATGACCCTACTCTGAGATGT +
Preference number: 1 (lower is better)
Translates to: RMCCTFVPPWQPGSK*THFSVTRNDPTLRC
Trigger: ACATCTCAGAGTAGGGTCATTTCTGGTCACTGAAAAGTGAGTCCACTTGGATCCAGGTTGCCAGGGAGGAACAAACGTACAGCACATGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR TCA 90 bp TCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGTaGCGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAG +
Preference number: 1 (lower is better)
Translates to: SVRGVPTVETECMAR*RFLPEGWLCFHWLE
Trigger: CTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGTCACCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR TCA 90 bp CAGTATCTTGCAGAAGACGCCTCAGTCCTTCTTGTGACTCTCCACTaGGGTCATCCCTGCAGCCAAGGTTGTTTCCAAACTAAGAGACTA +
Preference number: 1 (lower is better)
Translates to: QYLAEDASVLLVTLH*GHPCSQGCFQTKRL
Trigger: TAGTCTCTTAGTTTGGAAACAACCTTGGCTGCAGGGATGACCTCAGTGGAGAGTCACAAGAAGGACTGAGGCGTCTTCTGCAAGATACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR CCA 90 bp CTGTCCAATGCAAGATTAGAGGCAGCTCAGTGGAACGATATCAAGTaGGTCCAAGTTTCCACTGATAAATCTCAGAGAGGGATGGAGGCC +
Preference number: 1 (lower is better)
Translates to: LSNARLEAAQWNDIK*VQVSTDKSQRGMEA
Trigger: GGCCTCCATCCCTCTCTGAGATTTATCAGTGGAAACTTGGACCCACTTGATATCGTTCCACTGAGCTGCCTCTAATCTTGCATTGGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR GCA 90 bp AAAGATATTCTTCAGGTGGCCTGGTTTTCCCCTTACTTAGCATTCTaGACTGTTAGGTTGAGCAGAATGGTCCAAGATCTTGCTCCTAGG +
Preference number: 1 (lower is better)
Translates to: KDILQVAWFSPYLAF*TVRLSRMVQDLAPR
Trigger: CCTAGGAGCAAGATCTTGGACCATTCTGCTCAACCTAACAGTGCAGAATGCTAAGTAAGGGGAAAACCAGGCCACCTGAAGAATATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR CCA 90 bp GCAATTCCACTGAAGTTGTTATACTCCATGCCTCTAAGAAGGACTTaGGATATGTCTCTCAAGCAACATTGCAAGTCCTGTGCACTAGGG +
Preference number: 1 (lower is better)
Translates to: AIPLKLLYSMPLRRT*DMSLKQHCKSCALG
Trigger: CCCTAGTGCACAGGACTTGCAATGTTGCTTGAGAGACATATCCCAAGTCCTTCTTAGAGGCATGGAGTATAACAACTTCAGTGGAATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR TCA 90 bp AAATGGGAGAGTAAATCCAGCCCAGCAGGTCTTTCATGCTTGTTTTaGGGATCCAGAATAGGAGTTCTCGGTCTCTTCGTTCATAATAGG +
Preference number: 1 (lower is better)
Translates to: KWESKSSPAGLSCLF*GSRIGVLGLFVHNR
Trigger: CCTATTATGAACGAAGAGACCGAGAACTCCTATTCTGGATCCTCAAAACAAGCATGAAAGACCTGCTGGGCTGGATTTACTCTCCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR GCA 90 bp CACACAATCTTAATATTCCCTTCTTTGTCCAAAGCTCCTGTCCAATaGAAGATTAGAGGCAGCTCAGTGGAACGATATCAAGTGGGTCCA +
Preference number: 1 (lower is better)
Translates to: HTILIFPSLSKAPVQ*KIRGSSVERYQVGP
Trigger: TGGACCCACTTGATATCGTTCCACTGAGCTGCCTCTAATCTTGCATTGGACAGGAGCTTTGGACAAAGAAGGGAATATTAAGATTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR TCA 90 bp TGTGTGTGTGTGTGTGCATGTGTGAGTGTGCACATAAATTGTGTGTaGGTGTGCATTATAGTTTCTTGCTTTCTCTCTTGGTTTAGCTGG +
Preference number: 1 (lower is better)
Translates to: CVCVCACVSVHINCV*VCIIVSCFLSWFSW
Trigger: CCAGCTAAACCAAGAGAGAAAGCAAGAAACTATAATGCACACTCACACACAATTTATGTGCACACTCACACATGCACACACACACACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR TCA 90 bp TTGATAGTGCCATGTCTCAATAGCCTCAATCTTGGGGATCATGGCTaGAACACATGCACGAACTTCTGTAAATGTCTTAGAATCAGTGAC +
Preference number: 1 (lower is better)
Translates to: LIVPCLNSLNLGDHG*NTCTNFCKCLRISD
Trigger: GTCACTGATTCTAAGACATTTACAGAAGTTCGTGCATGTGTTTCAGCCATGATCCCCAAGATTGAGGCTATTGAGACATGGCACTATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR GCA 90 bp GTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTAGGAAACCTGCAGCCTaGTCCTCGCGAGCGTCCATG +
Preference number: 2 (lower is better)
Translates to: VRLLSPAKDYALRAGGRFRKPAA*SSRASM
Trigger: CATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTCCT...AAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR GCA 90 bp AGGTGTGCTATGCAGGCAGCTCTGGGGGCTCTTGGAGCCGCCTCTAAGCAAACAAGGAAACCTGCAGCCTaGTCCTCGCGAGCGTCCATG +
Preference number: 2 (lower is better)
Translates to: RCAMQAALGALGAASKQTRKPAA*SSRASM
Trigger: CATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTCCT...TGTTTGCTTAGAGGCGGCTCCAAGAGCCCCCAGAGCTGCCTGCATAGCACACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
3UTR-3UTR TCA 90 bp AAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCCCTCGCGAGCGTCCATaGGGAAACTTGCAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: KGRPRNQRAPAEPCQGLCPRERP*GNLQGW
Trigger: CCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGG...GCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR CCA 90 bp GCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTAGGCCTGTGGGAATGTaGAGGTTGCTGCCTAAGCCA +
Preference number: 2 (lower is better)
Translates to: APAEPCQGLCSESRRPFCRPVGM*RLLPKP
Trigger: TGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCT...ACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR TCA 90 bp GCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACCTCGCGAGCGTCCATaGGGAAACTTGCAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: AKDYALRAGGRFVSVQREPRERP*GNLQGW
Trigger: CCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGG...TTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR GCA 90 bp CCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGCATAGGCAGGAAACCTaGAGCCTGCTCCTCGCGAGC +
Preference number: 2 (lower is better)
Translates to: PAKDYALRAGGRFVSVQRHRQET*SLLLAS
Trigger: GCTCGCGAGGAGCAGGCTGCAGGTTTCCTGCCTATG...CCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR TCA 90 bp GACCCCTCTGTCCTGGCTGGCAGTATCTTGCAGAAGACGCCTCAGTCCTTCTTGCCAAGGATTATGCTCTaGGAGCCGGAGGCCGTTTTG +
Preference number: 2 (lower is better)
Translates to: DPSVLAGSILQKTPQSFLPRIML*EPEAVL
Trigger: CAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGG...CAAGAAGGACTGAGGCGTCTTCTGCAAGATACTGCCAGCCAGGACAGAGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR GCA 90 bp CCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCGAATGTGGAGGTTGCTaGCTAAGCCAGCCACAACCT +
Preference number: 2 (lower is better)
Translates to: PAEPCQGLCSESRRPFCLECGGC*LSQPQP
Trigger: AGGTTGTGGCTGGCTTAGGCAGCAACCTCCACATTC...GAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR GCA 90 bp GCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACATAGGCAGGAAACCTaGAGCCTGCTCCTCGCGAGC +
Preference number: 2 (lower is better)
Translates to: AKDYALRAGGRFVSVQREHRQET*SLLLAS
Trigger: GCTCGCGAGGAGCAGGCTGCAGGTTTCCTGCCTATG...TTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR GCA 90 bp TGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGACATAGGCAGGAAACCTaGAGCCTGCTCCTCGCGAGC +
Preference number: 2 (lower is better)
Translates to: CQGLCSESRRPFCLCTEGHRQET*SLLLAS
Trigger: GCTCGCGAGGAGCAGGCTGCAGGTTTCCTGCCTATG...TCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR CCA 90 bp GCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCCAGCCACAACCTCATaGGCCCTAAGTCCATTCAAA +
Preference number: 2 (lower is better)
Translates to: APAEPCQGLCSESRRPFCPATTS*ALSPFK
Trigger: TTTGAATGGACTTAGGGCCCATGAGGTTGTGGCTGG...ACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR CCA 90 bp ACACACGCGCGCACACACGTTAAGACCATCAGAAGGTCCTTCAGGTCATACTCTCTATGCAGGCAGCTCTaGGGGCTCTTGGAGCCGCCT +
Preference number: 2 (lower is better)
Translates to: THARTHVKTIRRSFRSYSLCRQL*GLLEPP
Trigger: AGGCGGCTCCAAGAGCCCCCAGAGCTGCCTGCATAG...AGAGTATGACCTGAAGGACCTTCTGATGGTCTTAACGTGTGTGCGCGCGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR TCA 90 bp CCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCGAATGTATGGCAAGGTaGCGTTTTCTTCCCGAAGGG +
Preference number: 2 (lower is better)
Translates to: PAEPCQGLCSESRRPFCLECMAR*RFLPEG
Trigger: CCCTTCGGGAAGAAAACGTCACCTTGCCATACATTC...GAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR GCA 90 bp GACCCCTCTGTCCTGGCTGGCAGTATCTTGCAGAAGACGCCTCAGTCCTTCTTGCCTTCAGGAATAGTCTaGCACCAGGGCTTGGAACTC +
Preference number: 2 (lower is better)
Translates to: DPSVLAGSILQKTPQSFLPSGIV*HQGLEL
Trigger: GAGTTCCAAGCCCTGGTGGCAGACTATTCCTGAAGG...CAAGAAGGACTGAGGCGTCTTCTGCAAGATACTGCCAGCCAGGACAGAGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR CCA 90 bp CCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCCCAGCCACAACCTCATaGGCCCTAAGTCCATTCAAA +
Preference number: 2 (lower is better)
Translates to: PAEPCQGLCSESRRPFCLPATTS*ALSPFK
Trigger: TTTGAATGGACTTAGGGCCCATGAGGTTGTGGCTGG...GAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR TCA 90 bp TCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGAGAATGTATGGCAAGGTaGCGTTTTCTTCCCGAAGGG +
Preference number: 2 (lower is better)
Translates to: SLKGRPRNQRAPAEPCQGECMAR*RFLPEG
Trigger: CCCTTCGGGAAGAAAACGTCACCTTGCCATACATTC...TCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR GCA 90 bp CCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGTGGGAATGTGGAGGTTaGTGCCTAAGCCAGCCACAA +
Preference number: 2 (lower is better)
Translates to: PAKDYALRAGGRFVSVQRWECGG*CLSQPQ
Trigger: TTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCA...CCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR GCA 90 bp AAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTGGGAATGTGGAGGTTaGTGCCTAAGCCAGCCACAA +
Preference number: 2 (lower is better)
Translates to: KGRPRNQRAPAEPCQGLCWECGG*CLSQPQ
Trigger: TTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCA...GCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR CCA 90 bp CCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTTTCTTCCCGAAGGGTaGCTTTGCTTCCACTGGTTA +
Preference number: 2 (lower is better)
Translates to: PAEPCQGLCSESRRPFCLFLPEG*LCFHWL
Trigger: TAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAA...GAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR CCA 90 bp TGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAAGGCCTGTGGGAATGTaGAGGTTGCTGCCTAAGCCA +
Preference number: 2 (lower is better)
Translates to: CQGLCSESRRPFCLCTEGRPVGM*RLLPKP
Trigger: TGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCT...TCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR CAA 90 bp AGCTTTCCACAGCCTTTCTGCCTCTTCAGCAGGTTCACGGAGAAGTaGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: SFPQPFCLFSRFTEK*SLKGRPRNQRAPAE
Trigger: CTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTTCTCCGTGAACCTGCTGAAGAGGCAGAAAGGCTGTGGAAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR CAA 90 bp AGGTCAGAGAGAACCTCTGGGAAGCAGCATGAGGCGCTCGTTTTCTaGTGTGGGGATATCCCATCCACGCATGTGCTGTACGTTTGTTCC +
Preference number: 2 (lower is better)
Translates to: RSERTSGKQHEALVF*CGDIPSTHVLYVCS
Trigger: GGAACAAACGTACAGCACATGCGTGGATGGGATATCCCCACACAAGAAAACGAGCGCCTCATGCTGCTTCCCAGAGGTTCTCTCTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR CCA 90 bp GTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTTCTTGCTTTCTCTCTTaGTTTAGCTGGTGTTTGGCA +
Preference number: 2 (lower is better)
Translates to: VRLLSPAKDYALRAGGRFSCFLS*FSWCLA
Trigger: TGCCAAACACCAGCTAAACCAAGAGAGAAAGCAAGA...AAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR CCA 90 bp AGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCTCTGCTCAAGGCCTGTaGGAATGTGGAGGTTGCTGC +
Preference number: 2 (lower is better)
Translates to: SVHEETCRAGRKKGGFPFSAQGL*ECGGCC
Trigger: GCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGA...GAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR CCA 90 bp TGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGACAGAGCTCCTTCCCTTaGCCACATCTGATCTCACCA +
Preference number: 2 (lower is better)
Translates to: CQGLCSESRRPFCLCTEGQSSFP*PHLISP
Trigger: TGGTGAGATCAGATGTGGCCAAGGGAAGGAGCTCTG...TCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR CCA 90 bp CCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTTTGTGCAAATTCTCTaGAACCAGAGCTCCTTCCCT +
Preference number: 2 (lower is better)
Translates to: PAEPCQGLCSESRRPFCLFVQIL*NQSSFP
Trigger: AGGGAAGGAGCTCTGGTTCCAGAGAATTTGCACAAA...GAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR TCA 90 bp AAATTCTGCTCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAGAATGTATGGCAAGGTaGCGTTTTCTTCCCGAAGGG +
Preference number: 2 (lower is better)
Translates to: KFCSRPVGMWRLLPKPATECMAR*RFLPEG
Trigger: CCCTTCGGGAAGAAAACGTCACCTTGCCATACATTC...TGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR TCA 90 bp AGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGTGTACCCACTGTTaGAACAGAATGTATGGCAAG +
Preference number: 2 (lower is better)
Translates to: SLLLASVHEETCRAGRKKGCTHC*NRMYGK
Trigger: CTTGCCATACATTCTGTTTCAACAGTGGGTACACCC...TTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR CCA 90 bp AGAAGGTTCCTGGAAAATAACAAGTGCCCACCGACGGCGCAGAAACCCAAGAATTCTGCTCAAGGCCTGTaGGAATGTGGAGGTTGCTGC +
Preference number: 2 (lower is better)
Translates to: RRFLENNKCPPTAQKPKNSAQGL*ECGGCC
Trigger: GCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGA...ATTCTTGGGTTTCTGCGCCGTCGGTGGGCACTTGTTATTTTCCAGGAACCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
3UTR-3UTR CCA 90 bp CGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGTTTGTGCAAATTCTCTaGAACCAGAGCTCCTTCCCT +
Preference number: 2 (lower is better)
Translates to: RPRNQRAPAEPCQGLCSEFVQIL*NQSSFP
Trigger: AGGGAAGGAGCTCTGGTTCCAGAGAATTTGCACAAA...CTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR TCA 90 bp GATGGAGGCCCAATGAAGCTCTGCATGGCCTTGCCCTTGGGAAAGGATGGTAATGGGTGTACCCACTGTTaGAACAGAATGTATGGCAAG +
Preference number: 2 (lower is better)
Translates to: DGGPMKLCMALPLGKDGNGCTHC*NRMYGK
Trigger: CTTGCCATACATTCTGTTTCAACAGTGGGTACACCC...ATTACCATCCTTTCCCAAGGGCAAGGCCATGCAGAGCTTCATTGGGCCTCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR GCA 90 bp GCTCTGGGGGCTCTTGGAGCCGCCTCTAAGCAAACATGTAGACACCAGGAGAAGACAGAGGGAACTTTGTaGAAATTCTCTGGAACCAGA +
Preference number: 2 (lower is better)
Translates to: ALGALGAASKQTCRHQEKTEGTL*KFSGTR
Trigger: TCTGGTTCCAGAGAATTTGCACAAAGTTCCCTCTGT...CTTCTCCTGGTGTCTACATGTTTGCTTAGAGGCGGCTCCAAGAGCCCCCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
3UTR-3UTR GCA 90 bp TCTGTAAATGTCTTAGAATCAGTGACCCCAAACCTGAACCTGCCTCAGTTTCAGCCCTGCCAAGGATTATaGTCTGAGAGCCGGAGGCCG +
Preference number: 2 (lower is better)
Translates to: SVNVLESVTPNLNLPQFQPCQGL*SESRRP
Trigger: CGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGG...CTGAAACTGAGGCAGGTTCAGGTTTGGGGTCACTGATTCTAAGACATTTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR CCA 90 bp TCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAACCTCATGGTCTTGCTTTCTCTCTTaGTTTAGCTGGTGTTTGGCA +
Preference number: 2 (lower is better)
Translates to: SRPVGMWRLLPKPATTSWSCFLS*FSWCLA
Trigger: TGCCAAACACCAGCTAAACCAAGAGAGAAAGCAAGA...CCATGAGGTTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR CCA 90 bp GTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTTTGAAACAGAATGTATaGCAAGGTGACGTTTTCTTC +
Preference number: 2 (lower is better)
Translates to: VRLLSPAKDYALRAGGRFLKQNV*QGDVFF
Trigger: GAAGAAAACGTCACCTTGCCATACATTCTGTTTCAA...AAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCAC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR CAA 90 bp CTCCATGCCTCTAAGAAGGACTTGGGATATGTCTCTCAAGCAACATaGCAAGTCCTGTGCACTAGGGTGCAGCAGGTAAGGGCCATTTTC +
Preference number: 2 (lower is better)
Translates to: LHASKKDLGYVSQAT*QVLCTRVQQVRAIF
Trigger: GAAAATGGCCCTTACCTGCTGCACCCTAGTGCACAGGACTTGCAATGTTGCTTGAGAGACATATCCCAAGTCCTTCTTAGAGGCATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR TCA 90 bp AAAGATATTCTTCAGGTGGCCTGGTTTTCCCCTTACTTAGCATTCTGCACTGTTCCAACGTGCGCCTGCTaGGCCCTGCCAAGGATTATG +
Preference number: 2 (lower is better)
Translates to: KDILQVAWFSPYLAFCTVPTCAC*ALPRIM
Trigger: CATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGG...AACAGTGCAGAATGCTAAGTAAGGGGAAAACCAGGCCACCTGAAGAATATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR GCA 90 bp GCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAAAGTCTCAGAAAATTCTaGTCAAGGCCTGTGGGAATG +
Preference number: 2 (lower is better)
Translates to: AKDYALRAGGRFVSVQRESLRKF*SRPVGM
Trigger: CATTCCCACAGGCCTTGAGCAGAATTTTCTGAGACT...TTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR GCA 90 bp GTTCACGGAGAAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCAGTCTCAGAAAATTCTaGTCAAGGCCTGTGGGAATG +
Preference number: 2 (lower is better)
Translates to: VHGEVVTQRTTKKPTCACSLRKF*SRPVGM
Trigger: CATTCCCACAGGCCTTGAGCAGAATTTTCTGAGACT...GCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTTCTCCGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR CCA 90 bp AGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAATGGCTTTGCTTCCACTaGTTAGAGAAGAGTGTGTAT +
Preference number: 2 (lower is better)
Translates to: SLLLASVHEETCRAGRKKWLCFH*LEKSVY
Trigger: ATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCA...TTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR TCA 90 bp ACACACGCGCGCACACACGTTAAGACCATCAGAAGGTCCTTCAGGTCATACTCTAAACACGCTTTGGCTTaGAAAAGAAAGAAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: THARTHVKTIRRSFRSYSKHALA*KRKKLG
Trigger: CCCCAGCTTCTTTCTTTTTCAAGCCAAAGCGTGTTT...AGAGTATGACCTGAAGGACCTTCTGATGGTCTTAACGTGTGTGCGCGCGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR GCA 90 bp GATGGAGGCCCAATGAAGCTCTGCATGGCCTTGCCCTTGGGAAAGGATGGTAATACAGAGGGAACTTTGTaGAAATTCTCTGGAACCAGA +
Preference number: 2 (lower is better)
Translates to: DGGPMKLCMALPLGKDGNTEGTL*KFSGTR
Trigger: TCTGGTTCCAGAGAATTTGCACAAAGTTCCCTCTGT...ATTACCATCCTTTCCCAAGGGCAAGGCCATGCAGAGCTTCATTGGGCCTCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR CCA 90 bp CACACACACACGCGCGCACACACGTTAAGACCATCAGAAGGTCCTTCAGGTCATTCTTGCTTTCTCTCTTaGTTTAGCTGGTGTTTGGCA +
Preference number: 2 (lower is better)
Translates to: HTHTRAHTLRPSEGPSGHSCFLS*FSWCLA
Trigger: TGCCAAACACCAGCTAAACCAAGAGAGAAAGCAAGA...ATGACCTGAAGGACCTTCTGATGGTCTTAACGTGTGTGCGCGCGTGTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR CCA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTTTTCTTCCCGAAGGGTaGCTTTGCTTCCACTGGTTA +
Preference number: 2 (lower is better)
Translates to: SHNLMGPKSIQNVLLALAFLPEG*LCFHWL
Trigger: TAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAA...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR CAA 90 bp AACAGAATGTATGGCAAGGTGACGTTTTCTTCCCGAAGGGTGGCTTaGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: NRMYGKVTFSSRRVA*LPLVREECVCVCVC
Trigger: ACACACACACACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGTCACCTTGCCATACATTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR CCA 90 bp ACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTCTGTTTTCTTCCCGAAGGGTaGCTTTGCTTCCACTGGTTA +
Preference number: 2 (lower is better)
Translates to: TTSWALSPFKMFCWHWLCFLPEG*LCFHWL
Trigger: TAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAA...ACAGAGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR CCA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTTGGCTTTGCTTCCACTaGTTAGAGAAGAGTGTGTAT +
Preference number: 2 (lower is better)
Translates to: SHNLMGPKSIQNVLLALAWLCFH*LEKSVY
Trigger: ATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCA...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR CAA 90 bp TGCAATTCCACTGAAGTTGTTATACTCCATGCCTCTAAGAAGGACTaGGGATATGTCTCTCAAGCAACATTGCAAGTCCTGTGCACTAGG +
Preference number: 2 (lower is better)
Translates to: CNSTEVVILHASKKD*GYVSQATLQVLCTR
Trigger: CCTAGTGCACAGGACTTGCAATGTTGCTTGAGAGACATATCCCAAGTCCTTCTTAGAGGCATGGAGTATAACAACTTCAGTGGAATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR CCA 90 bp CCTTCACAGTTAAGTGCCATTTGTACACACAATCTTAATATTCCCTTCTTTGTCCCCCTCTGTCCTGGCTaGCAGTATCTTGCAGAAGAC +
Preference number: 2 (lower is better)
Translates to: PSQLSAICTHNLNIPFFVPLCPG*QYLAED
Trigger: GTCTTCTGCAAGATACTGCCAGCCAGGACAGAGGGG...GACAAAGAAGGGAATATTAAGATTGTGTGTACAAATGGCACTTAACTGTGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR CCA 90 bp ATCTTGGGGATCATGGCTGAAACACATGCACGAACTTCTGTAAATGTCTTAGAAAATCTCAGAGAGGGATaGAGGCCCAATGAAGCTCTG +
Preference number: 2 (lower is better)
Translates to: ILGIMAETHARTSVNVLENLREG*RPNEAL
Trigger: CAGAGCTTCATTGGGCCTCCATCCCTCTCTGAGATT...TTCTAAGACATTTACAGAAGTTCGTGCATGTGTTTCAGCCATGATCCCCAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR TCA 90 bp AAGTGGACTCACTTTTCAGTGACCAGAAATGACCCTACTCTGAGATGTGTGGGTCTTTCATGCTTGTTTTaGGGATCCAGAATAGGAGTT +
Preference number: 2 (lower is better)
Translates to: KWTHFSVTRNDPTLRCVGLSCLF*GSRIGV
Trigger: AACTCCTATTCTGGATCCTCAAAACAAGCATGAAAG...ACCCACACATCTCAGAGTAGGGTCATTTCTGGTCACTGAAAAGTGAGTCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR CCA 90 bp CTGCCTAAGCCAGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTTGAAACAGAATGTATaGCAAGGTGACGTTTTCTTC +
Preference number: 2 (lower is better)
Translates to: LPKPATTSWALSPFKMFCLKQNV*QGDVFF
Trigger: GAAGAAAACGTCACCTTGCCATACATTCTGTTTCAA...ACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCTGGCTTAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR GCA 90 bp CCTTCACAGTTAAGTGCCATTTGTACACACAATCTTAATATTCCCTTCTTTGTCTTTCCACAGCCTTTCTaGCTCTTCAGCAGGTTCACG +
Preference number: 2 (lower is better)
Translates to: PSQLSAICTHNLNIPFFVFPQPF*LFSRFT
Trigger: CGTGAACCTGCTGAAGAGGCAGAAAGGCTGTGGAAA...GACAAAGAAGGGAATATTAAGATTGTGTGTACAAATGGCACTTAACTGTGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR CAA 90 bp GTGTGTATGTGTGTGTGTGTGTGCATGTGTGAGTGTGCACATAAATaGTGTGTGAGTGTGCATTATAGTTTCTTGCTTTCTCTCTTGGTT +
Preference number: 2 (lower is better)
Translates to: VCMCVCVCMCECAHK*CVSVHYSFLLSLLV
Trigger: AACCAAGAGAGAAAGCAAGAAACTATAATGCACACTCACACACAATTTATGTGCACACTCACACATGCACACACACACACACATACACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR GCA 72 bp GGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTaGCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTT +
Preference number: 3 (lower is better)
Translates to: GRPRNQRAPAEP*QGLCSESRRPF
Trigger: AAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR GCA 72 bp TGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTaGAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTC +
Preference number: 3 (lower is better)
Translates to: CSLLLASVHEET*RAGRKKGGFPF
Trigger: GAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR GCA 72 bp ACATCTGATCTCACCATAGGCAGGAAACCTGCAGCCTaGTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGG +
Preference number: 3 (lower is better)
Translates to: TSDLTIGRKPAA*SSRASMRKLAG
Trigger: CCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTCCTGCCTATGGTGAGATCAGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR GCA 72 bp AACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATaGTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACA +
Preference number: 3 (lower is better)
Translates to: NQRAPAEPCQGL*SESRRPFCLCT
Trigger: TGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR CAA 90 bp GTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGGGGTGTACCCACTGTaGAAACAGAATGTATGGCAA +
Preference number: 3 (lower is better)
Translates to: VRLLSPAKDYALRAGGRFGVYPL*KQNVWQ
Trigger: TTGCCATACATTCTGTTTCAACAGTGGGTACACCCC...AAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR TCA 72 bp TTCTCTGGAACCAGAGCTCCTTCCCTTGGCCACATCTaGTCTCACCATAGGCAGGAAACCTGCAGCCTGCTC +
Preference number: 3 (lower is better)
Translates to: FSGTRAPSLGHI*SHHRQETCSLL
Trigger: GAGCAGGCTGCAGGTTTCCTGCCTATGGTGAGATCAGATGTGGCCAAGGGAAGGAGCTCTGGTTCCAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR-3UTR CAA 90 bp GTGAGTGCAAAGAAGCAGGAGGGAACCGTCTCCTGGTTTCCCCAGCAAAGTTCCTCCCGAAGGGTGGCTTaGCTTCCACTGGTTAGAGAA +
Preference number: 3 (lower is better)
Translates to: VSAKKQEGTVSWFPQQSSSRRVA*LPLVRE
Trigger: TTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGA...GGAACTTTGCTGGGGAAACCAGGAGACGGTTCCCTCCTGCTTCTTTGCACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR CAA 90 bp CCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCGGGGTGTACCCACTGTaGAAACAGAATGTATGGCAA +
Preference number: 3 (lower is better)
Translates to: PAEPCQGLCSESRRPFCLGVYPL*KQNVWQ
Trigger: TTGCCATACATTCTGTTTCAACAGTGGGTACACCCC...GAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR TCA 72 bp GGCAGTATCTTGCAGAAGACGCCTCAGTCCTTCTTGTaGCTCTCCACTGAGGTCATCCCTGCAGCCAAGGTT +
Preference number: 3 (lower is better)
Translates to: GSILQKTPQSFL*LSTEVIPAAKV
Trigger: AACCTTGGCTGCAGGGATGACCTCAGTGGAGAGTCACAAGAAGGACTGAGGCGTCTTCTGCAAGATACTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR CAA 90 bp TTCATTCCCCTTAACCCTTGTGATCACCACAGGGAGATGCGTCCTGACAATGAACAGCTCTGGGGGCTCTaGGAGCCGCCTCTAAGCAAA +
Preference number: 3 (lower is better)
Translates to: FIPLNPCDHHREMRPDNEQLWGL*EPPLSK
Trigger: TTTGCTTAGAGGCGGCTCCAAGAGCCCCCAGAGCTG...TTCATTGTCAGGACGCATCTCCCTGTGGTGATCACAAGGGTTAAGGGGAATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR CAA 90 bp CAAGCAACATTGCAAGTCCTGTGCACTAGGGTGCAGCAGGTAAGGGCCATTTTCGAGGCGCTCGTTTTCTaGTGTGGGGATATCCCATCC +
Preference number: 3 (lower is better)
Translates to: QATLQVLCTRVQQVRAIFEALVF*CGDIPS
Trigger: GGATGGGATATCCCCACACAAGAAAACGAGCGCCTC...GAAAATGGCCCTTACCTGCTGCACCCTAGTGCACAGGACTTGCAATGTTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR TCA 72 bp TCCATTCAGGTCAGAGAGAACCTCTGGGAAGCAGCATaGGGCGCTCGTTTTCTTGTGTGGGGATATCCCATC +
Preference number: 3 (lower is better)
Translates to: SIQVRENLWEAA*GARFLVWGYPI
Trigger: GATGGGATATCCCCACACAAGAAAACGAGCGCCTCATGCTGCTTCCCAGAGGTTCTCTCTGACCTGAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR TCA 72 bp GCAGAAGACGCCTCAGTCCTTCTTGTGACTCTCCACTaGGGTCATCCCTGCAGCCAAGGTTGTTTCCAAACT +
Preference number: 3 (lower is better)
Translates to: AEDASVLLVTLH*GHPCSQGCFQT
Trigger: AGTTTGGAAACAACCTTGGCTGCAGGGATGACCTCAGTGGAGAGTCACAAGAAGGACTGAGGCGTCTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR GCA 72 bp TCGTTTTCTTGTGTGGGGATATCCCATCCACGCATGTaGTGTACGTTTGTTCCTCCCTGGCAACCTGGATCC +
Preference number: 3 (lower is better)
Translates to: SFSCVGISHPRM*CTFVPPWQPGS
Trigger: GGATCCAGGTTGCCAGGGAGGAACAAACGTACAGCACATGCGTGGATGGGATATCCCCACACAAGAAAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR CCA 72 bp GTGGTGAGTGCAAAGAAGCAGGAGGGAACCGTCTCCTaGTTTCCCCAGCAAAGTTCCTTCCTTCCCATCTTT +
Preference number: 3 (lower is better)
Translates to: VVSAKKQEGTVS*FPQQSSFLPIF
Trigger: AAAGATGGGAAGGAAGGAACTTTGCTGGGGAAACCAGGAGACGGTTCCCTCCTGCTTCTTTGCACTCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR CCA 72 bp TCCCATCCACGCATGTGCTGTACGTTTGTTCCTCCCTaGCAACCTGGATCCAAGTGGACTCACTTTTCAGTG +
Preference number: 3 (lower is better)
Translates to: SHPRMCCTFVPP*QPGSKWTHFSV
Trigger: CACTGAAAAGTGAGTCCACTTGGATCCAGGTTGCCAGGGAGGAACAAACGTACAGCACATGCGTGGATGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR CCA 72 bp GGGTCCAAGTTTCCACTGATAAATCTCAGAGAGGGATaGAGGCCCAATGAAGCTCTGCATGGCCTTGCCCTT +
Preference number: 3 (lower is better)
Translates to: GSKFPLINLREG*RPNEALHGLAL
Trigger: AAGGGCAAGGCCATGCAGAGCTTCATTGGGCCTCCATCCCTCTCTGAGATTTATCAGTGGAAACTTGGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR CAA 90 bp GCTCTGGGGGCTCTTGGAGCCGCCTCTAAGCAAACATGTAGACACCAGGAGAAGATTCAAAATGTTTTGTaGGCACTGGCTCTGTTAGGG +
Preference number: 3 (lower is better)
Translates to: ALGALGAASKQTCRHQEKIQNVL*ALALLG
Trigger: CCCTAACAGAGCCAGTGCCAACAAAACATTTTGAAT...CTTCTCCTGGTGTCTACATGTTTGCTTAGAGGCGGCTCCAAGAGCCCCCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
3UTR-3UTR CAA 90 bp AAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTGTACAGAGGGAACTTaGTGCAAATTCTCTGGAACC +
Preference number: 3 (lower is better)
Translates to: KGRPRNQRAPAEPCQGLCCTEGT*CKFSGT
Trigger: GGTTCCAGAGAATTTGCACAAAGTTCCCTCTGTACA...GCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR CCA 72 bp ATCACCACAGGGAGATGCGTCCTGACAATGAAACGGTaGAGTGGGGGAGTGAGAACCTTCTTTTTCCTTACC +
Preference number: 3 (lower is better)
Translates to: ITTGRCVLTMKR*SGGVRTFFFLT
Trigger: GGTAAGGAAAAAGAAGGTTCTCACTCCCCCACTCCACCGTTTCATTGTCAGGACGCATCTCCCTGTGGTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR CAA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTTCCCGAAGGGTGGCTTaGCTTCCACTGGTTAGAGAA +
Preference number: 3 (lower is better)
Translates to: SHNLMGPKSIQNVLLALASRRVA*LPLVRE
Trigger: TTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGA...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR GCA 72 bp GTAGACACCAGGAGAAGGTTCCTGGAAAATAACAAGTaGCCACCGACGGCGCAGAAACCCAAGAATGGAAAT +
Preference number: 3 (lower is better)
Translates to: VDTRRRFLENNK*PPTAQKPKNGN
Trigger: ATTTCCATTCTTGGGTTTCTGCGCCGTCGGTGGGCACTTGTTATTTTCCAGGAACCTTCTCCTGGTGTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
3UTR GCA 72 bp TTGGGATATGTCTCTCAAGCAACATTGCAAGTCCTGTaGACTAGGGTGCAGCAGGTAAGGGCCATTTTCTGC +
Preference number: 3 (lower is better)
Translates to: LGYVSQATLQVL*TRVQQVRAIFC
Trigger: GCAGAAAATGGCCCTTACCTGCTGCACCCTAGTGCACAGGACTTGCAATGTTGCTTGAGAGACATATCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR CCA 72 bp CACAGGGAGATGCGTCCTGACAATGAAACGGTGGAGTaGGGGAGTGAGAACCTTCTTTTTCCTTACCACTTT +
Preference number: 3 (lower is better)
Translates to: HREMRPDNETVE*GSENLLFPYHF
Trigger: AAAGTGGTAAGGAAAAAGAAGGTTCTCACTCCCCCACTCCACCGTTTCATTGTCAGGACGCATCTCCCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR CAA 90 bp TCAGAAACAAGTGGCTTCCAAGATAGTACCTGTAGTAATTCTGGAGCTTGTTGGCCAGAGCTCCTTCCCTaGGCCACATCTGATCTCACC +
Preference number: 3 (lower is better)
Translates to: SETSGFQDSTCSNSGACWPELLP*ATSDLT
Trigger: GGTGAGATCAGATGTGGCCAAGGGAAGGAGCTCTGG...CCAACAAGCTCCAGAATTACTACAGGTACTATCTTGGAAGCCACTTGTTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR CCA 72 bp CTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATaGCAAGGTGACGTTTTCTTCCCGAAGGGTGGCTTT +
Preference number: 3 (lower is better)
Translates to: LLGVYPLLKQNV*QGDVFFPKGGF
Trigger: AAAGCCACCCTTCGGGAAGAAAACGTCACCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR CCA 72 bp TGTACGTTTGTTCCTCCCTGGCAACCTGGATCCAAGTaGACTCACTTTTCAGTGACCAGAAATGACCCTACT +
Preference number: 3 (lower is better)
Translates to: CTFVPPWQPGSK*THFSVTRNDPT
Trigger: AGTAGGGTCATTTCTGGTCACTGAAAAGTGAGTCCACTTGGATCCAGGTTGCCAGGGAGGAACAAACGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR CAA 90 bp GAGGCGCTCGTTTTCTTGTGTGGGGATATCCCATCCACGCATGTGCTGTACGTTTCCATTCAAAATGTTTaGTTGGCACTGGCTCTGTTA +
Preference number: 3 (lower is better)
Translates to: EALVFLCGDIPSTHVLYVSIQNV*LALALL
Trigger: TAACAGAGCCAGTGCCAACAAAACATTTTGAATGGA...AACGTACAGCACATGCGTGGATGGGATATCCCCACACAAGAAAACGAGCGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR CAA 90 bp AGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCTCCATTCAAAATGTTTaGTTGGCACTGGCTCTGTTA +
Preference number: 3 (lower is better)
Translates to: SVHEETCRAGRKKGGFPFSIQNV*LALALL
Trigger: TAACAGAGCCAGTGCCAACAAAACATTTTGAATGGA...GAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR GCA 72 bp CTTCAGGTGGCCTGGTTTTCCCCTTACTTAGCATTCTaGACTGTTAGGTTGAGCAGAATGGTCCAAGATCTT +
Preference number: 3 (lower is better)
Translates to: LQVAWFSPYLAF*TVRLSRMVQDL
Trigger: AAGATCTTGGACCATTCTGCTCAACCTAACAGTGCAGAATGCTAAGTAAGGGGAAAACCAGGCCACCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR GCA 72 bp CGAGATAATAATACCTTCTCTGCTAACCTCAGAGGTTaGTATGAGGGTCACTATGATGAGGGACTCCACCAC +
Preference number: 3 (lower is better)
Translates to: RDNNTFSANLRG*YEGHYDEGLHH
Trigger: GTGGTGGAGTCCCTCATCATAGTGACCCTCATAGCAACCTCTGAGGTTAGCAGAGAAGGTATTATTATCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR CCA 72 bp GCAAGATTAGAGGCAGCTCAGTGGAACGATATCAAGTaGGTCCAAGTTTCCACTGATAAATCTCAGAGAGGG +
Preference number: 3 (lower is better)
Translates to: ARLEAAQWNDIK*VQVSTDKSQRG
Trigger: CCCTCTCTGAGATTTATCAGTGGAAACTTGGACCCACTTGATATCGTTCCACTGAGCTGCCTCTAATCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR CCA 72 bp AAGCTCCTGTCCAATGCAAGATTAGAGGCAGCTCAGTaGAACGATATCAAGTGGGTCCAAGTTTCCACTGAT +
Preference number: 3 (lower is better)
Translates to: KLLSNARLEAAQ*NDIKWVQVSTD
Trigger: ATCAGTGGAAACTTGGACCCACTTGATATCGTTCCACTGAGCTGCCTCTAATCTTGCATTGGACAGGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR-3UTR CAA 90 bp AAAGATATTCTTCAGGTGGCCTGGTTTTCCCCTTACTTAGCATTCTGCACTGTTAGGTTCACGGAGAAGTaGTCACTCAAAGGACGACCA +
Preference number: 3 (lower is better)
Translates to: KDILQVAWFSPYLAFCTVRFTEK*SLKGRP
Trigger: TGGTCGTCCTTTGAGTGACAACTTCTCCGTGAACCT...AACAGTGCAGAATGCTAAGTAAGGGGAAAACCAGGCCACCTGAAGAATATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR TCA 72 bp AGTAAATCCAGCCCAGCAGGTCTTTCATGCTTGTTTTaGGGATCCAGAATAGGAGTTCTCGGTCTCTTCGTT +
Preference number: 3 (lower is better)
Translates to: SKSSPAGLSCLF*GSRIGVLGLFV
Trigger: AACGAAGAGACCGAGAACTCCTATTCTGGATCCTCAAAACAAGCATGAAAGACCTGCTGGGCTGGATTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR TCA 72 bp TTTCTGCACTGCCCCTTCATGAGACCTGTGAGTCTCTaGGAATCAATTTCACCTGTTGATAGTGCCATGTCT +
Preference number: 3 (lower is better)
Translates to: FLHCPFMRPVSL*ESISPVDSAMS
Trigger: AGACATGGCACTATCAACAGGTGAAATTGATTCTCAGAGACTCACAGGTCTCATGAAGGGGCAGTGCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR TCA 72 bp CCATGTCTCAATAGCCTCAATCTTGGGGATCATGGCTaGAACACATGCACGAACTTCTGTAAATGTCTTAGA +
Preference number: 3 (lower is better)
Translates to: PCLNSLNLGDHG*NTCTNFCKCLR
Trigger: TCTAAGACATTTACAGAAGTTCGTGCATGTGTTTCAGCCATGATCCCCAAGATTGAGGCTATTGAGACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR TCA 72 bp GTGTGTGCATGTGTGAGTGTGCACATAAATTGTGTGTaGGTGTGCATTATAGTTTCTTGCTTTCTCTCTTGG +
Preference number: 3 (lower is better)
Translates to: VCACVSVHINCV*VCIIVSCFLSW
Trigger: CCAAGAGAGAAAGCAAGAAACTATAATGCACACTCACACACAATTTATGTGCACACTCACACATGCACACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR GCA 72 bp TTAATATTCCCTTCTTTGTCCAAAGCTCCTGTCCAATaGAAGATTAGAGGCAGCTCAGTGGAACGATATCAA +
Preference number: 3 (lower is better)
Translates to: LIFPSLSKAPVQ*KIRGSSVERYQ
Trigger: TTGATATCGTTCCACTGAGCTGCCTCTAATCTTGCATTGGACAGGAGCTTTGGACAAAGAAGGGAATATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp AGGCAGGAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGGGCGTCTTCCCGCCTaGGCAGCCCTCTCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: RQETCSLLLASVHEETCRGRLPA*AALSGE
Trigger: CTCCCCCGAGAGGGCTGCGCAGGCGGGAAGACGCCC...CCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTCCTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp GAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTCAGGCAACACTTGGTTaGGCGGTGGCCCGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: ETCSLLLASVHEETCRAGQATLG*AVARGA
Trigger: AGCGCCCCGGGCCACCGCGCAACCAAGTGTTGCCTG...ACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR GCA 90 bp GAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTCGGCACCACACGCAGTaGCGCGCGGTGACACTCTGG +
Preference number: 4 (lower is better)
Translates to: ETCSLLLASVHEETCRAGRHHTQ*RAVTLW
Trigger: CCAGAGTGTCACCGCGCGGCACTGCGTGTGGTGCCG...ACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR TCA 90 bp GTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTCTGGCCTGTCCCGGGTaGTGGGGCATATGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VRLLSPAKDYALRAGGRFLACPG*WGIWRW
Trigger: CCACCTCCATATGCCCCATCACCCGGGACAGGCCAG...AAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp TCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAACCTCATGGGGGATGCAGCCCCAGTaGGTGCCGCGGAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: SRPVGMWRLLPKPATTSWGMQPQ*VPRRPG
Trigger: GCCTGGTCTCCGCGGCACCCACTGGGGCTGCATCCC...CCATGAGGTTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp GAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTGTGACAGAGGCGCACTaGGCCAGCCTCCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: ETCSLLLASVHEETCRAGVTEAH*ASLLPA
Trigger: TGCAGGCAGGAGGCTGGCCCAGTGCGCCTCTGTCAC...ACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTCCTCGCGAGCGTCCATaGGGAAACTTGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ETCSLLLASVHEETCRAGPRERP*GNLQGW
Trigger: CCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGG...ACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp GCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTTTCATGGTCCAGGCGTaGCGCCCATCCCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: APAEPCQGLCSESRRPFCFMVQA*RPSPLE
Trigger: CTCCAAGGGGGATGGGCGGCACGCCTGGACCATGAA...ACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp GCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTGTGCAGCACAGGCCTTaGTTGCGGACGCCCATGAGC +
Preference number: 4 (lower is better)
Translates to: APAEPCQGLCSESRRPFCVQHRP*LRTPMS
Trigger: GCTCATGGGCGTCCGCAAGCAAGGCCTGTGCTGCAC...ACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AGGTGTGCTATGCAGGCAGCTCTGGGGGCTCTTGGAGCCGCCTCTAAGCAAACAAAGGGGGACCGAAGCTaGCCTCTGGGCGTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: RCAMQAALGALGAASKQTKGDRS*PLGVFP
Trigger: CGGGAAGACGCCCAGAGGCCAGCTTCGGTCCCCCTT...TGTTTGCTTAGAGGCGGCTCCAAGAGCCCCCAGAGCTGCCTGCATAGCACACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp AGGCAGGAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGTCTGGGCTTCTGGCTaGAGGCCAGGAAGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RQETCSLLLASVHEETCRVWASG*RPGRGE
Trigger: CTCACCTCTTCCTGGCCTTCAGCCAGAAGCCCAGAC...CCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTAACTCCAGCTTATCCTaGGGCCTCCCCGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VRLLSPAKDYALRAGGRFNSSLS*GLPVSS
Trigger: GCTGGAGACGGGGAGGCCTCAGGATAAGCTGGAGTT...AAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTAACTCCAGCTTATCCTaGGGCCTCCCCGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: APAEPCQGLCSESRRPFCNSSLS*GLPVSS
Trigger: GCTGGAGACGGGGAGGCCTCAGGATAAGCTGGAGTT...ACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp CCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCGTGCAGCACAGGCCTTaGTTGCGGACGCCCATGAGC +
Preference number: 4 (lower is better)
Translates to: PAEPCQGLCSESRRPFCLVQHRP*LRTPMS
Trigger: GCTCATGGGCGTCCGCAAGCAAGGCCTGTGCTGCAC...GAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp AGGCAGGAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGAGGAAACCTGCAGCCTaGTCCTCGCGAGCGTCCATG +
Preference number: 4 (lower is better)
Translates to: RQETCSLLLASVHEETCRRKPAA*SSRASM
Trigger: CATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTCCT...CCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp GAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTCATAGGCAGGAAACCTaGAGCCTGCTCCTCGCGAGC +
Preference number: 4 (lower is better)
Translates to: ETCSLLLASVHEETCRAGHRQET*SLLLAS
Trigger: GCTCGCGAGGAGCAGGCTGCAGGTTTCCTGCCTATG...ACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGAGGTGAGTGCTCAGTaGCTGGGGAAGGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: VRLLSPAKDYALRAGGRFEVSAQ*LGKVHL
Trigger: GAGGTGGACCTTCCCCAGCCACTGAGCACTCACCTC...AAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp CCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCCCAACGTGCGCCTGCTaGGCCCTGCCAAGGATTATG +
Preference number: 4 (lower is better)
Translates to: PAEPCQGLCSESRRPFCLPTCAC*ALPRIM
Trigger: CATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGG...GAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp CAGCATGAGGCGCTCGTTTTCTTGTGTGGGGATATCCCATCCACGCATGTGCTGCCGCGGAGACCAGGCTaGCAGGCTGTGGTTGGTAGC +
Preference number: 4 (lower is better)
Translates to: QHEALVFLCGDIPSTHVLPRRPG*QAVVGS
Trigger: GCTACCAACCACAGCCTGGCAGCCTGGTCTCCGCGG...CAGCACATGCGTGGATGGGATATCCCCACACAAGAAAACGAGCGCCTCATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp CCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCAGGAAACCTGCAGCCTaGTCCTCGCGAGCGTCCATG +
Preference number: 4 (lower is better)
Translates to: PAEPCQGLCSESRRPFCLRKPAA*SSRASM
Trigger: CATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTCCT...GAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTAGCTGTCTATCTCCGTaGCCCGCTACTACGGCACTG +
Preference number: 4 (lower is better)
Translates to: APAEPCQGLCSESRRPFCSCLSP*PATTAL
Trigger: CAGTGCCGTAGTAGCGGGCCACGGAGATAGACAGCT...ACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp CCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGTCACCAGGCAACACTTaGTTGCGCGGTGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: PAKDYALRAGGRFVSVQRSPGNT*LRGGPG
Trigger: CCCCGGGCCACCGCGCAACCAAGTGTTGCCTGGTGA...CCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR CCA 90 bp GAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTCCAGCAATGGGATGGTaGTCATCCCTCCATGGACCC +
Preference number: 4 (lower is better)
Translates to: ETCSLLLASVHEETCRAGPAMGW*SSLHGP
Trigger: GGGTCCATGGAGGGATGACCACCATCCCATTGCTGG...ACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTCAGGAGGACCAGCAATaGGATGGTGGTCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: ETCSLLLASVHEETCRAGQEDQQ*DGGHPS
Trigger: GGAGGGATGACCACCATCCCATTGCTGGTCCTCCTG...ACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTATCAGACTTCTCACCTaGCCTGTCCCGGGTGATGGG +
Preference number: 4 (lower is better)
Translates to: ETCSLLLASVHEETCRAGIRLLT*PVPGDG
Trigger: CCCATCACCCGGGACAGGCCAGGTGAGAAGTCTGAT...ACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp CGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGCTATGCAGGCAGCTCTaGGGGCTCTTGGAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: RPRNQRAPAEPCQGLCSELCRQL*GLLEPP
Trigger: AGGCGGCTCCAAGAGCCCCCAGAGCTGCCTGCATAG...CTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR TCA 90 bp GTGAGTGCAAAGAAGCAGGAGGGAACCGTCTCCTGGTTTCCCCAGCAAAGTTCCCCTCGCGAGCGTCCATaGGGAAACTTGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VSAKKQEGTVSWFPQQSSPRERP*GNLQGW
Trigger: CCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGG...GGAACTTTGCTGGGGAAACCAGGAGACGGTTCCCTCCTGCTTCTTTGCACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp GAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTCTCTGGGAAGCAGCATaGGGCGCTCGTTTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: ETCSLLLASVHEETCRAGLWEAA*GARFLV
Trigger: CACAAGAAAACGAGCGCCTCATGCTGCTTCCCAGAG...ACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp CTGGAACCAGAGCTCCTTCCCTTGGCCACATCTGATCTCACCATAGGCAGGAAAACTGGGCCAGCCTCCTaGCTGCACTCTTCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LEPELLPLATSDLTIGRKTGPAS*LHSSGR
Trigger: CCGGCCTGAAGAGTGCAGGCAGGAGGCTGGCCCAGT...TTTCCTGCCTATGGTGAGATCAGATGTGGCCAAGGGAAGGAGCTCTGGTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp TGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGACAGGCTGCCAGGCTGTaGTTGGTAGCGCCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: CQGLCSESRRPFCLCTEGQAARL*LVAPGS
Trigger: AGACCCCGGCGCTACCAACCACAGCCTGGCAGCCTG...TCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp TCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGAGAGGTGAGTGCTCAGTaGCTGGGGAAGGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: SLKGRPRNQRAPAEPCQGEVSAQ*LGKVHL
Trigger: GAGGTGGACCTTCCCCAGCCACTGAGCACTCACCTC...TCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCGCTCCCTCCGTCGGGTaGTCAGAGGTCTCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: KGRPRNQRAPAEPCQGLCAPSVG*SEVSCL
Trigger: CAGACACGAGACCTCTGACCACCCGACGGAGGGAGC...GCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp CACACACACACGCGCGCACACACGTTAAGACCATCAGAAGGTCCTTCAGGTCATGTGACAGAGGCGCACTaGGCCAGCCTCCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: HTHTRAHTLRPSEGPSGHVTEAH*ASLLPA
Trigger: TGCAGGCAGGAGGCTGGCCCAGTGCGCCTCTGTCAC...ATGACCTGAAGGACCTTCTGATGGTCTTAACGTGTGTGCGCGCGTGTGTGTGTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp TGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAGTGACAGAGGCGCACTaGGCCAGCCTCCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: CQGLCSESRRPFCLCTEGVTEAH*ASLLPA
Trigger: TGCAGGCAGGAGGCTGGCCCAGTGCGCCTCTGTCAC...TCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCCTATGCAGGCAGCTCTaGGGGCTCTTGGAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: KGRPRNQRAPAEPCQGLCLCRQL*GLLEPP
Trigger: AGGCGGCTCCAAGAGCCCCCAGAGCTGCCTGCATAG...GCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR TCA 90 bp AAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCAACTCCAGCTTATCCTaGGGCCTCCCCGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KGRPRNQRAPAEPCQGLCNSSLS*GLPVSS
Trigger: GCTGGAGACGGGGAGGCCTCAGGATAAGCTGGAGTT...GCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCCTCAGTCCTTCTTGTaGCTCTCCACTGAGGTCATC +
Preference number: 4 (lower is better)
Translates to: APAEPCQGLCSESRRPFCPQSFL*LSTEVI
Trigger: GATGACCTCAGTGGAGAGTCACAAGAAGGACTGAGG...ACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp CCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTCAACGAGAAGAAGCTaGTCTTCTGGGGAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PAEPCQGLCSESRRPFCLSTRRS*SSGEAP
Trigger: TGGGGCCTCCCCAGAAGAGCAGCTTCTTCTCGTTGA...GAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp GCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTGAATGTGGAGGTTGCTaGCTAAGCCAGCCACAACCT +
Preference number: 4 (lower is better)
Translates to: APAEPCQGLCSESRRPFCECGGC*LSQPQP
Trigger: AGGTTGTGGCTGGCTTAGGCAGCAACCTCCACATTC...ACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp AAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCAGGAAACCTGCAGCCTaGTCCTCGCGAGCGTCCATG +
Preference number: 4 (lower is better)
Translates to: KGRPRNQRAPAEPCQGLCRKPAA*SSRASM
Trigger: CATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTCCT...GCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp GAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTCCTTCAGGAATAGTCTaGCACCAGGGCTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: ETCSLLLASVHEETCRAGPSGIV*HQGLEL
Trigger: GAGTTCCAAGCCCTGGTGGCAGACTATTCCTGAAGG...ACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp TGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAGCCCAGCCCAGGGCCTaGCTCATTGCAGGTTTGCGA +
Preference number: 4 (lower is better)
Translates to: CQGLCSESRRPFCLCTEGAQPRA*LIAGLR
Trigger: TCGCAAACCTGCAATGAGCCAGGCCCTGGGCTGGGC...TCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCTTCACTAGGCTGAAGTaGAGGCCCAGCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: KLSLKGRPRNQRAPAEPCFTRLK*RPSPGP
Trigger: AGGCCCTGGGCTGGGCCTCCACTTCAGCCTAGTGAA...GCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AATTCTGCTCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAATGGCCTCACTGTTGCTaGCTCCCTCCGTCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: NSAQGLWECGGCCLSQPQWPHCC*LPPSGG
Trigger: ACCACCCGACGGAGGGAGCCAGCAACAGTGAGGCCA...TTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp CTGGAACCAGAGCTCCTTCCCTTGGCCACATCTGATCTCACCATAGGCAGGAAATGGCCTCACTGTTGCTaGCTCCCTCCGTCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LEPELLPLATSDLTIGRKWPHCC*LPPSGG
Trigger: ACCACCCGACGGAGGGAGCCAGCAACAGTGAGGCCA...TTTCCTGCCTATGGTGAGATCAGATGTGGCCAAGGGAAGGAGCTCTGGTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp CCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGGGGTCGCAGCCACTTaGTCTTCAGCTGGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: PAKDYALRAGGRFVSVQRGVAAT*SSAGAC
Trigger: GCAAGCACCAGCTGAAGACCAAGTGGCTGCGACCCC...CCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCGGGGTCGCAGCCACTTaGTCTTCAGCTGGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: KLSLKGRPRNQRAPAEPCGVAAT*SSAGAC
Trigger: GCAAGCACCAGCTGAAGACCAAGTGGCTGCGACCCC...GCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GTTCACGGAGAAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCGCCGCCCATCCCCCTTaGAGCCAGAGTCATCCATCC +
Preference number: 4 (lower is better)
Translates to: VHGEVVTQRTTKKPTCACAAHPP*SQSHPS
Trigger: GGATGGATGACTCTGGCTCCAAGGGGGATGGGCGGC...GCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTTCTCCGTGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp TCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGCTGGCCTGTCCCGGGTaGTGGGGCATATGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SSRRVALLPLVREECVCVLACPG*WGIWRW
Trigger: CCACCTCCATATGCCCCATCACCCGGGACAGGCCAG...CACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGTCTGGCCTGTCCCGGGTaGTGGGGCATATGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ALALLGVYPLLKQNVWQGLACPG*WGIWRW
Trigger: CCACCTCCATATGCCCCATCACCCGGGACAGGCCAG...ACCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp CCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGCTTCCTCTCTGGGGATaGCTTCCAGATGCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: PAKDYALRAGGRFVSVQRLPLWG*LPDASG
Trigger: ACCGCTGGCATCTGGAAGTCATCCCCAGAGAGGAAG...CCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp CGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGGTTCTTTGGGGTCAGTaGCACCCTTCCTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: RPRNQRAPAEPCQGLCSEVLWGQ*HPSCFP
Trigger: GGGAAAGCAGGAAGGGTGTCACTGACCCCAAAGAAC...CTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp CGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGCCAAGGATTATGCTCTaGGAGCCGGAGGCCGTTTTG +
Preference number: 4 (lower is better)
Translates to: RPRNQRAPAEPCQGLCSEPRIML*EPEAVL
Trigger: CAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGG...CTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp TTGAAACAGAATGTATGGCAAGGTGACGTTTTCTTCCCGAAGGGTGGCTTTGCTTGCAGCCCCAGTGGGTaGCGCGGAGACCAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LKQNVWQGDVFFPKGGFACSPSG*RGDQAA
Trigger: GGCAGCCTGGTCTCCGCGGCACCCACTGGGGCTGCA...AGCAAAGCCACCCTTCGGGAAGAAAACGTCACCTTGCCATACATTCTGTTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp CCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGCCTTCCACCCATGCGTaGTGCATCACCTCACCACTC +
Preference number: 4 (lower is better)
Translates to: PAKDYALRAGGRFVSVQRPSTHA*CITSPL
Trigger: GAGTGGTGAGGTGATGCAGCACGCATGGGTGGAAGG...CCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR GCA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTCGGCACCACACGCAGTaGCGCGCGGTGACACTCTGG +
Preference number: 4 (lower is better)
Translates to: SHNLMGPKSIQNVLLALARHHTQ*RAVTLW
Trigger: CCAGAGTGTCACCGCGCGGCACTGCGTGTGGTGCCG...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR GCA 90 bp AAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCGGGATGACTTCCAGATaGCAGCGGTCCAGCATCACC +
Preference number: 4 (lower is better)
Translates to: KLSLKGRPRNQRAPAEPCGMTSR*QRSSIT
Trigger: GGTGATGCTGGACCGCTGGCATCTGGAAGTCATCCC...GCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp TCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAACCTCATGGCTCCCCAGAGATTGGTaGCTCCGTACATGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SRPVGMWRLLPKPATTSWLPRDW*LRTCWE
Trigger: TTCCCAGCATGTACGGAGGCACCAATCTCTGGGGAG...CCATGAGGTTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp AAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACTTACTGGGCCAGCCTCCTaGCTGCACTCTTCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: KDYALRAGGRFVSVQRELTGPAS*LHSSGR
Trigger: CCGGCCTGAAGAGTGCAGGCAGGAGGCTGGCCCAGT...AAGTTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp CTGGAACCAGAGCTCCTTCCCTTGGCCACATCTGATCTCACCATAGGCAGGAAACATAGGCAGGAAACCTaGAGCCTGCTCCTCGCGAGC +
Preference number: 4 (lower is better)
Translates to: LEPELLPLATSDLTIGRKHRQET*SLLLAS
Trigger: GCTCGCGAGGAGCAGGCTGCAGGTTTCCTGCCTATG...TTTCCTGCCTATGGTGAGATCAGATGTGGCCAAGGGAAGGAGCTCTGGTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp GAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTTTTCCACAGCCTTTCTaGCTCTTCAGCAGGTTCACG +
Preference number: 4 (lower is better)
Translates to: ETCSLLLASVHEETCRAGFPQPF*LFSRFT
Trigger: CGTGAACCTGCTGAAGAGGCAGAAAGGCTGTGGAAA...ACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp GCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTACATTGCAAGTCCTGTaGACTAGGGTGCAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: APAEPCQGLCSESRRPFCTLQVL*TRVQQV
Trigger: TACCTGCTGCACCCTAGTGCACAGGACTTGCAATGT...ACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp CTGCCTAAGCCAGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTACCGAAGCTGGCCTCTaGGCGTCTTCCCGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: LPKPATTSWALSPFKMFCTEAGL*ASSRLR
Trigger: GCGCAGGCGGGAAGACGCCCAGAGGCCAGCTTCGGT...ACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCTGGCTTAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp GTTCACGGAGAAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTTCACTAGGCTGAAGTaGAGGCCCAGCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VHGEVVTQRTTKKPTCACFTRLK*RPSPGP
Trigger: AGGCCCTGGGCTGGGCCTCCACTTCAGCCTAGTGAA...GCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTTCTCCGTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCGCTCCCTCCGTCGGGTaGTCAGAGGTCTCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SVHEETCRAGRKKGGFPFAPSVG*SEVSCL
Trigger: CAGACACGAGACCTCTGACCACCCGACGGAGGGAGC...GAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AGGCAGGAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGCACTTGGTCTTCAGCTaGTGCTTGCTTCTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: RQETCSLLLASVHEETCRHLVFS*CLLLSH
Trigger: ATGGCTGAGAAGCAAGCACCAGCTGAAGACCAAGTG...CCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTCACTTGGTCTTCAGCTaGTGCTTGCTTCTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: VRLLSPAKDYALRAGGRFHLVFS*CLLLSH
Trigger: ATGGCTGAGAAGCAAGCACCAGCTGAAGACCAAGTG...AAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AATTCTGCTCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAAGGGGTCGCAGCCACTTaGTCTTCAGCTGGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: NSAQGLWECGGCCLSQPQGVAAT*SSAGAC
Trigger: GCAAGCACCAGCTGAAGACCAAGTGGCTGCGACCCC...TTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp CGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGGCCTGTGGGAATGTaGAGGTTGCTGCCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: RPRNQRAPAEPCQGLCSERPVGM*RLLPKP
Trigger: TGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCT...CTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp CCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCCTGACAATGAAACGGTaGAGTGGGGGAGTGAGAACC +
Preference number: 4 (lower is better)
Translates to: PAEPCQGLCSESRRPFCLLTMKR*SGGVRT
Trigger: GGTTCTCACTCCCCCACTCCACCGTTTCATTGTCAG...GAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp AAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCTTTTGTTCACTAGGCTaGAGTGGAGGCCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: KLSLKGRPRNQRAPAEPCFCSLG*SGGPAQ
Trigger: CTGGGCTGGGCCTCCACTTCAGCCTAGTGAACAAAA...GCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp CCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGTTTTGTTCACTAGGCTaGAGTGGAGGCCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PAKDYALRAGGRFVSVQRFCSLG*SGGPAQ
Trigger: CTGGGCTGGGCCTCCACTTCAGCCTAGTGAACAAAA...CCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTCATAGAGGCGAAACATaGACTCCAGCTTATCCTGAG +
Preference number: 4 (lower is better)
Translates to: ETCSLLLASVHEETCRAGHRGET*TPAYPE
Trigger: CTCAGGATAAGCTGGAGTTCATGTTTCGCCTCTATG...ACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCATAGAGGCGAAACATaGACTCCAGCTTATCCTGAG +
Preference number: 4 (lower is better)
Translates to: APAEPCQGLCSESRRPFCHRGET*TPAYPE
Trigger: CTCAGGATAAGCTGGAGTTCATGTTTCGCCTCTATG...ACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp CGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGGTAAGATGTGGTCTCTaGGTTCCCCACCGTCACACA +
Preference number: 4 (lower is better)
Translates to: RPRNQRAPAEPCQGLCSEVRCGL*VPHRHT
Trigger: TGTGTGACGGTGGGGAACTCAGAGACCACATCTTAC...CTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GAGGCGCTCGTTTTCTTGTGTGGGGATATCCCATCCACGCATGTGCTGTACGTTCTTCCTCTCTGGGGATaGCTTCCAGATGCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: EALVFLCGDIPSTHVLYVLPLWG*LPDASG
Trigger: ACCGCTGGCATCTGGAAGTCATCCCCAGAGAGGAAG...AACGTACAGCACATGCGTGGATGGGATATCCCCACACAAGAAAACGAGCGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp GTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGGGTGTACCCACTGTTaGAACAGAATGTATGGCAAG +
Preference number: 4 (lower is better)
Translates to: VRLLSPAKDYALRAGGRFGCTHC*NRMYGK
Trigger: CTTGCCATACATTCTGTTTCAACAGTGGGTACACCC...AAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp ACACACGCGCGCACACACGTTAAGACCATCAGAAGGTCCTTCAGGTCATACTCTGGGATGGAGGCCCAATaGAGCTCTGCATGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: THARTHVKTIRRSFRSYSGMEAQ*SSAWPC
Trigger: GCAAGGCCATGCAGAGCTTCATTGGGCCTCCATCCC...AGAGTATGACCTGAAGGACCTTCTGATGGTCTTAACGTGTGTGCGCGCGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp AGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCTGTTGGCCTCACTGTTaGTGGCTCCCTCCGTCGGGT +
Preference number: 4 (lower is better)
Translates to: SVHEETCRAGRKKGGFPFCWPHC*WLPPSG
Trigger: ACCCGACGGAGGGAGCCAGCAACAGTGAGGCCAACA...GAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp TCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGTTCATGGTCCAGGCGTaGCGCCCATCCCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SSRRVALLPLVREECVCVFMVQA*RPSPLE
Trigger: CTCCAAGGGGGATGGGCGGCACGCCTGGACCATGAA...CACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp CCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCGTTGGTTTCTTGAAGTaGTTCATGGTCCAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: PAEPCQGLCSESRRPFCLVGFLK*FMVQAC
Trigger: GCACGCCTGGACCATGAAGCACTTCAAGAAACCAAC...GAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp GCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTGGATTTTTGTCAAGCTaGCCCCTTCATAACCTCCTC +
Preference number: 4 (lower is better)
Translates to: APAEPCQGLCSESRRPFCGFLSS*PLHNLL
Trigger: GAGGAGGTTATGAAGGGGGCAGCTTGACAAAAATCC...ACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp CCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCCACATGGAATCTGTGTaGAATGGAAGCGTCCACACC +
Preference number: 4 (lower is better)
Translates to: PAEPCQGLCSESRRPFCLHMESV*NGSVHT
Trigger: GGTGTGGACGCTTCCATTGCACACAGATTCCATGTG...GAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTACTGGGCCAGCCTCCTaGCTGCACTCTTCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: SHNLMGPKSIQNVLLALATGPAS*LHSSGR
Trigger: CCGGCCTGAAGAGTGCAGGCAGGAGGCTGGCCCAGT...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp AGGCAGGAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGGTTCTCCATCCACTTaGATTGGCAGCAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: RQETCSLLLASVHEETCRGSPST*IGSSLF
Trigger: AAACAAGCTGCTGCCAATGCAAGTGGATGGAGAACC...CCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTCCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp GACCCCTCTGTCCTGGCTGGCAGTATCTTGCAGAAGACGCCTCAGTCCTTCTTGATCGTGCAACATGGCTaGATCCAGGGTTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: DPSVLAGSILQKTPQSFLIVQHG*IQGSPS
Trigger: GGATGGAGAACCCTGGATGCAGCCATGTTGCACGAT...CAAGAAGGACTGAGGCGTCTTCTGCAAGATACTGCCAGCCAGGACAGAGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp AAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCTCAACGAGAAGAAGCTaGTCTTCTGGGGAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: KLSLKGRPRNQRAPAEPCSTRRS*SSGEAP
Trigger: TGGGGCCTCCCCAGAAGAGCAGCTTCTTCTCGTTGA...GCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp TCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATGGGAATGTGGAGGTTaGTGCCTAAGCCAGCCACAA +
Preference number: 4 (lower is better)
Translates to: SLKGRPRNQRAPAEPCQGWECGG*CLSQPQ
Trigger: TTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCA...TCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp AGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCCCCTGCCAAGGATTATaGTCTGAGAGCCGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: SVHEETCRAGRKKGGFPFPCQGL*SESRRP
Trigger: CGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGG...GAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp CGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGTCCCATCCACGCATGTaGTGTACGTTTGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: RPRNQRAPAEPCQGLCSESHPRM*CTFVPP
Trigger: GGGAGGAACAAACGTACAGCACATGCGTGGATGGGA...CTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTTCACCAGGCAACACTTaGTTGCGCGGTGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: SHNLMGPKSIQNVLLALASPGNT*LRGGPG
Trigger: CCCCGGGCCACCGCGCAACCAAGTGTTGCCTGGTGA...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR CCA 90 bp AAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACTTGCCCAGCCCAGGGCCTaGCTCATTGCAGGTTTGCGA +
Preference number: 4 (lower is better)
Translates to: KDYALRAGGRFVSVQRELAQPRA*LIAGLR
Trigger: TCGCAAACCTGCAATGAGCCAGGCCCTGGGCTGGGC...AAGTTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AAATTCTGCTCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACACCAGCAATGGGATGGTaGTCATCCCTCCATGGACCC +
Preference number: 4 (lower is better)
Translates to: KFCSRPVGMWRLLPKPATPAMGW*SSLHGP
Trigger: GGGTCCATGGAGGGATGACCACCATCCCATTGCTGG...TGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GTGAGTGCAAAGAAGCAGGAGGGAACCGTCTCCTGGTTTCCCCAGCAAAGTTCCGGACCAGCAATGGGATaGTGGTCATCCCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: VSAKKQEGTVSWFPQQSSGPAMG*WSSLHG
Trigger: TCCATGGAGGGATGACCACCATCCCATTGCTGGTCC...GGAACTTTGCTGGGGAAACCAGGAGACGGTTCCCTCCTGCTTCTTTGCACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp AGAAGGTTCCTGGAAAATAACAAGTGCCCACCGACGGCGCAGAAACCCAAGAATGCCGCCCATCCCCCTTaGAGCCAGAGTCATCCATCC +
Preference number: 4 (lower is better)
Translates to: RRFLENNKCPPTAQKPKNAAHPP*SQSHPS
Trigger: GGATGGATGACTCTGGCTCCAAGGGGGATGGGCGGC...ATTCTTGGGTTTCTGCGCCGTCGGTGGGCACTTGTTATTTTCCAGGAACCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR CCA 90 bp GTTCACGGAGAAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCATCAGACTTCTCACCTaGCCTGTCCCGGGTGATGGG +
Preference number: 4 (lower is better)
Translates to: VHGEVVTQRTTKKPTCACIRLLT*PVPGDG
Trigger: CCCATCACCCGGGACAGGCCAGGTGAGAAGTCTGAT...GCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTTCTCCGTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AGGTGTGCTATGCAGGCAGCTCTGGGGGCTCTTGGAGCCGCCTCTAAGCAAACAGGAATCTGTGTGCAATaGAAGCGTCCACACCAATGG +
Preference number: 4 (lower is better)
Translates to: RCAMQAALGALGAASKQTGICVQ*KRPHQW
Trigger: CCATTGGTGTGGACGCTTCCATTGCACACAGATTCC...TGTTTGCTTAGAGGCGGCTCCAAGAGCCCCCAGAGCTGCCTGCATAGCACACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR CCA 90 bp GTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTAACTCAATGTGGTCGTaGAGTTTCTTGCAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: VRLLSPAKDYALRAGGRFNSMWS*SFLQVA
Trigger: AGCGACCTGCAAGAAACTCCACGACCACATTGAGTT...AAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTTCCATCCACTTGCATTaGCAGCAGCTTGTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: VRLLSPAKDYALRAGGRFSIHLH*QQLVCP
Trigger: AGGACAAACAAGCTGCTGCCAATGCAAGTGGATGGA...AAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp CCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGAGGCCTGTGGGAATGTaGAGGTTGCTGCCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: PAKDYALRAGGRFVSVQRRPVGM*RLLPKP
Trigger: TGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCT...CCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGCTCAAGGCCTGTaGGAATGTGGAGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: KGRPRNQRAPAEPCQGLCSAQGL*ECGGCC
Trigger: GCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGA...GCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp TCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGACAGAGCTCCTTCCCTTaGCCACATCTGATCTCACCA +
Preference number: 4 (lower is better)
Translates to: SLKGRPRNQRAPAEPCQGQSSFP*PHLISP
Trigger: TGGTGAGATCAGATGTGGCCAAGGGAAGGAGCTCTG...TCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCCCCCTCTGTCCTGGCTaGCAGTATCTTGCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: KGRPRNQRAPAEPCQGLCPLCPG*QYLAED
Trigger: GTCTTCTGCAAGATACTGCCAGCCAGGACAGAGGGG...GCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp AAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCGTTGGGGTAGAAGCATaGGGGGCAGGTGAGAACATG +
Preference number: 4 (lower is better)
Translates to: KLSLKGRPRNQRAPAEPCVGVEA*GAGENM
Trigger: CATGTTCTCACCTGCCCCCCATGCTTCTACCCCAAC...GCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR CAA 72 bp GTGTGGGGATATCCCATCCACGCATGTGCTGTACGTTaGTTCCTCCCTGGCAACCTGGATCCAAGTGGACTC +
Preference number: 4 (lower is better)
Translates to: VWGYPIHACAVR*FLPGNLDPSGL
Trigger: GAGTCCACTTGGATCCAGGTTGCCAGGGAGGAACAAACGTACAGCACATGCGTGGATGGGATATCCCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp AGGCAGGAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGAGACCGTTCTCATCTaGATCATAGAGGCGAAACAT +
Preference number: 4 (lower is better)
Translates to: RQETCSLLLASVHEETCRETVLI*IIEAKH
Trigger: ATGTTTCGCCTCTATGATTCAGATGAGAACGGTCTC...CCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGTGTGTGTGTGCACCTCGCGAGCGTCCATaGGGAAACTTGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VALLPLVREECVCVCVCAPRERP*GNLQGW
Trigger: CCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGG...TGCACACACACACACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GATGGAGGCCCAATGAAGCTCTGCATGGCCTTGCCCTTGGGAAAGGATGGTAATCCAAGGATTATGCTCTaGGAGCCGGAGGCCGTTTTG +
Preference number: 4 (lower is better)
Translates to: DGGPMKLCMALPLGKDGNPRIML*EPEAVL
Trigger: CAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGG...ATTACCATCCTTTCCCAAGGGCAAGGCCATGCAGAGCTTCATTGGGCCTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp AAATTCTGCTCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACACCAAGGATTATGCTCTaGGAGCCGGAGGCCGTTTTG +
Preference number: 4 (lower is better)
Translates to: KFCSRPVGMWRLLPKPATPRIML*EPEAVL
Trigger: CAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGG...TGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp AGAAGGTTCCTGGAAAATAACAAGTGCCCACCGACGGCGCAGAAACCCAAGAATCCAACGTGCGCCTGCTaGGCCCTGCCAAGGATTATG +
Preference number: 4 (lower is better)
Translates to: RRFLENNKCPPTAQKPKNPTCAC*ALPRIM
Trigger: CATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGG...ATTCTTGGGTTTCTGCGCCGTCGGTGGGCACTTGTTATTTTCCAGGAACCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR GCA 90 bp AGAAGGTTCCTGGAAAATAACAAGTGCCCACCGACGGCGCAGAAACCCAAGAATTGTTGGCCTCACTGTTaGTGGCTCCCTCCGTCGGGT +
Preference number: 4 (lower is better)
Translates to: RRFLENNKCPPTAQKPKNCWPHC*WLPPSG
Trigger: ACCCGACGGAGGGAGCCAGCAACAGTGAGGCCAACA...ATTCTTGGGTTTCTGCGCCGTCGGTGGGCACTTGTTATTTTCCAGGAACCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR GCA 90 bp GCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAAGGCACAGGCCTCGTCTaGTTTGGTGGCATTATCTGC +
Preference number: 4 (lower is better)
Translates to: AKDYALRAGGRFVSVQREGTGLV*FGGIIC
Trigger: GCAGATAATGCCACCAAAGCAGACGAGGCCTGTGCC...TTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp TTGTTGGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGGTGCAGCACAGGCCTTaGTTGCGGACGCCCATGAGC +
Preference number: 4 (lower is better)
Translates to: LLALALLGVYPLLKQNVWVQHRP*LRTPMS
Trigger: GCTCATGGGCGTCCGCAAGCAAGGCCTGTGCTGCAC...CCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp GTTCACGGAGAAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTCCACCCATGCGTGCTaGATCACCTCACCACTCCTT +
Preference number: 4 (lower is better)
Translates to: VHGEVVTQRTTKKPTCACSTHAC*ITSPLL
Trigger: AAGGAGTGGTGAGGTGATGCAGCACGCATGGGTGGA...GCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTTCTCCGTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR GCA 90 bp TCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAACCTCATGGCACATGGAATCTGTGTaGAATGGAAGCGTCCACACC +
Preference number: 4 (lower is better)
Translates to: SRPVGMWRLLPKPATTSWHMESV*NGSVHT
Trigger: GGTGTGGACGCTTCCATTGCACACAGATTCCATGTG...CCATGAGGTTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp AAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCATCGTGCAACATGGCTaGATCCAGGGTTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: KGRPRNQRAPAEPCQGLCIVQHG*IQGSPS
Trigger: GGATGGAGAACCCTGGATGCAGCCATGTTGCACGAT...GCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp GCTCTGGGGGCTCTTGGAGCCGCCTCTAAGCAAACATGTAGACACCAGGAGAAGCTGGAAAATAACAAGTaGCCACCGACGGCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: ALGALGAASKQTCRHQEKLENNK*PPTAQK
Trigger: TTTCTGCGCCGTCGGTGGGCACTTGTTATTTTCCAG...CTTCTCCTGGTGTCTACATGTTTGCTTAGAGGCGGCTCCAAGAGCCCCCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR GCA 90 bp AAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCACCACATCTAAGGTGTaGTATGCAGGCAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: KGRPRNQRAPAEPCQGLCTTSKV*YAGSSG
Trigger: CCCAGAGCTGCCTGCATAGCACACCTTAGATGTGGT...GCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR CCA 90 bp ACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTAGCCCAGCCCAGGGCCTaGCTCATTGCAGGTTTGCGA +
Preference number: 4 (lower is better)
Translates to: TFSSRRVALLPLVREECVAQPRA*LIAGLR
Trigger: TCGCAAACCTGCAATGAGCCAGGCCCTGGGCTGGGC...TACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTGCTCCCTCCGTCGGGTaGTCAGAGGTCTCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SHNLMGPKSIQNVLLALAAPSVG*SEVSCL
Trigger: CAGACACGAGACCTCTGACCACCCGACGGAGGGAGC...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GTGAGTGCAAAGAAGCAGGAGGGAACCGTCTCCTGGTTTCCCCAGCAAAGTTCCCAATCCATCTCCGCTTaGTCCAGGAGACCGTTCTCA +
Preference number: 4 (lower is better)
Translates to: VSAKKQEGTVSWFPQQSSQSISA*SRRPFS
Trigger: TGAGAACGGTCTCCTGGACCAAGCGGAGATGGATTG...GGAACTTTGCTGGGGAAACCAGGAGACGGTTCCCTCCTGCTTCTTTGCACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp TCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATCCCACTCCAGGTACTaGGCAATATGCAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: SLKGRPRNQRAPAEPCQGSHSRY*AICSIW
Trigger: CCAAATGCTGCATATTGCCCAGTACCTGGAGTGGGA...TCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCGTGGTCATCCCTCCATaGACCCATTCCTGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: KGRPRNQRAPAEPCQGLCVVIPP*THSCRD
Trigger: GTCTCTACAGGAATGGGTCCATGGAGGGATGACCAC...GCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGCAGGAGGACCAGCAATaGGATGGTGGTCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: GTGSVRGVPTVETECMARQEDQQ*DGGHPS
Trigger: GGAGGGATGACCACCATCCCATTGCTGGTCCTCCTG...CCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTGCCGCCCATCCCCCTTaGAGCCAGAGTCATCCATCC +
Preference number: 4 (lower is better)
Translates to: SHNLMGPKSIQNVLLALAAAHPP*SQSHPS
Trigger: GGATGGATGACTCTGGCTCCAAGGGGGATGGGCGGC...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp CCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTCCATCCACTTGCATTaGCAGCAGCTTGTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: PAEPCQGLCSESRRPFCLSIHLH*QQLVCP
Trigger: AGGACAAACAAGCTGCTGCCAATGCAAGTGGATGGA...GAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp CCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTTTAATCGTGCAACATaGCTGCATCCAGGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PAEPCQGLCSESRRPFCLFNRAT*LHPGFS
Trigger: GGAGAACCCTGGATGCAGCCATGTTGCACGATTAAA...GAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp TGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGATCTGCTCAAGGCCTGTaGGAATGTGGAGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: CQGLCSESRRPFCLCTEGSAQGL*ECGGCC
Trigger: GCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGA...TCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AGGCAGGAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGCAATCTTGGGGATCATaGCTGAAACACATGCACGAA +
Preference number: 4 (lower is better)
Translates to: RQETCSLLLASVHEETCRQSWGS*LKHMHE
Trigger: TTCGTGCATGTGTTTCAGCCATGATCCCCAAGATTG...CCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR CAA 72 bp AGAACCTCTGGGAAGCAGCATGAGGCGCTCGTTTTCTaGTGTGGGGATATCCCATCCACGCATGTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: RTSGKQHEALVF*CGDIPSTHVLY
Trigger: GTACAGCACATGCGTGGATGGGATATCCCCACACAAGAAAACGAGCGCCTCATGCTGCTTCCCAGAGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp CCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGCAAATTCTTCTGGAGTaGGGGAGACCCACCGTTCTT +
Preference number: 4 (lower is better)
Translates to: PAKDYALRAGGRFVSVQRQILLE*GRPTVL
Trigger: AAGAACGGTGGGTCTCCCTCACTCCAGAAGAATTTG...CCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp CTGCCTAAGCCAGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTGTCTGGGCTTCTGGCTaGAGGCCAGGAAGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: LPKPATTSWALSPFKMFCVWASG*RPGRGE
Trigger: CTCACCTCTTCCTGGCCTTCAGCCAGAAGCCCAGAC...ACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCTGGCTTAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GTTCACGGAGAAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCGTAAGATGTGGTCTCTaGGTTCCCCACCGTCACACA +
Preference number: 4 (lower is better)
Translates to: VHGEVVTQRTTKKPTCACVRCGL*VPHRHT
Trigger: TGTGTGACGGTGGGGAACTCAGAGACCACATCTTAC...GCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTTCTCCGTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTAAACTTGTTTGGGGTTaGGCAGATAGTGGAATTTCC +
Preference number: 4 (lower is better)
Translates to: ETCSLLLASVHEETCRAGKLVWG*ADSGIS
Trigger: GGAAATTCCACTATCTGCTCAACCCCAAACAAGTTT...ACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000382164.8
CDS-3UTR TCA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTCCAACGTGCGCCTGCTaGGCCCTGCCAAGGATTATG +
Preference number: 4 (lower is better)
Translates to: SHNLMGPKSIQNVLLALAPTCAC*ALPRIM
Trigger: CATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGG...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTAGACCTGTGAGTCTCTaGGAATCAATTTCACCTGTT +
Preference number: 4 (lower is better)
Translates to: VRLLSPAKDYALRAGGRFRPVSL*ESISPV
Trigger: AACAGGTGAAATTGATTCTCAGAGACTCACAGGTCT...AAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp TTGTTGGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGTGTTGGCCTCACTGTTaGTGGCTCCCTCCGTCGGGT +
Preference number: 4 (lower is better)
Translates to: LLALALLGVYPLLKQNVWCWPHC*WLPPSG
Trigger: ACCCGACGGAGGGAGCCAGCAACAGTGAGGCCAACA...CCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCCAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp AGGTGTGCTATGCAGGCAGCTCTGGGGGCTCTTGGAGCCGCCTCTAAGCAAACATTGGTCTTCAGCTGGTaGTTGCTTCTCAGCCATATT +
Preference number: 4 (lower is better)
Translates to: RCAMQAALGALGAASKQTLVFSW*LLLSHI
Trigger: AATATGGCTGAGAAGCAAGCACCAGCTGAAGACCAA...TGTTTGCTTAGAGGCGGCTCCAAGAGCCCCCAGAGCTGCCTGCATAGCACACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR GCA 90 bp TTGAAACAGAATGTATGGCAAGGTGACGTTTTCTTCCCGAAGGGTGGCTTTGCTTTCATGGTCCAGGCGTaGCGCCCATCCCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LKQNVWQGDVFFPKGGFAFMVQA*RPSPLE
Trigger: CTCCAAGGGGGATGGGCGGCACGCCTGGACCATGAA...AGCAAAGCCACCCTTCGGGAAGAAAACGTCACCTTGCCATACATTCTGTTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp CGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGACAGCCACTGGTGGATaGTTTGCAAAGTTGGCCTTA +
Preference number: 4 (lower is better)
Translates to: RPRNQRAPAEPCQGLCSETATGG*FAKLAL
Trigger: TAAGGCCAACTTTGCAAAGCATCCACCAGTGGCTGT...CTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp CTGGAACCAGAGCTCCTTCCCTTGGCCACATCTGATCTCACCATAGGCAGGAAATTTCTTGCAGGTCGCTaGAAAAGTCTCCGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: LEPELLPLATSDLTIGRKFLAGR*KSLRGA
Trigger: GGCACCTCGGAGACTTTTGCAGCGACCTGCAAGAAA...TTTCCTGCCTATGGTGAGATCAGATGTGGCCAAGGGAAGGAGCTCTGGTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp AAATTCTGCTCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACATTTCTTGCAGGTCGCTaGAAAAGTCTCCGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: KFCSRPVGMWRLLPKPATFLAGR*KSLRGA
Trigger: GGCACCTCGGAGACTTTTGCAGCGACCTGCAAGAAA...TGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp CCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGGTCGTGGAGTTTCTTaGAGGTCGCTGCAAAAGTCT +
Preference number: 4 (lower is better)
Translates to: PAKDYALRAGGRFVSVQRGRGVS*RSLQKS
Trigger: AGACTTTTGCAGCGACCTGCAAGAAACTCCACGACC...CCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp CAAGCAACATTGCAAGTCCTGTGCACTAGGGTGCAGCAGGTAAGGGCCATTTTCCTCCCCAGAGATTGGTaGCTCCGTACATGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: QATLQVLCTRVQQVRAIFLPRDW*LRTCWE
Trigger: TTCCCAGCATGTACGGAGGCACCAATCTCTGGGGAG...GAAAATGGCCCTTACCTGCTGCACCCTAGTGCACAGGACTTGCAATGTTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp AATTCTGCTCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAAATCGTGCAACATGGCTaGATCCAGGGTTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: NSAQGLWECGGCCLSQPQIVQHG*IQGSPS
Trigger: GGATGGAGAACCCTGGATGCAGCCATGTTGCACGAT...TTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp CTGGAACCAGAGCTCCTTCCCTTGGCCACATCTGATCTCACCATAGGCAGGAAATGGGAATGTGGAGGTTaGTGCCTAAGCCAGCCACAA +
Preference number: 4 (lower is better)
Translates to: LEPELLPLATSDLTIGRKWECGG*CLSQPQ
Trigger: TTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCA...TTTCCTGCCTATGGTGAGATCAGATGTGGCCAAGGGAAGGAGCTCTGGTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp AAGACCATCAGAAGGTCCTTCAGGTCATACTCTGGGAGTGGTGAGTGCAAAGAACCCTGCCAAGGATTATaGTCTGAGAGCCGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: KTIRRSFRSYSGSGECKEPCQGL*SESRRP
Trigger: CGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGG...TTCTTTGCACTCACCACTCCCAGAGTATGACCTGAAGGACCTTCTGATGGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTCCCTGCCAAGGATTATaGTCTGAGAGCCGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: SHNLMGPKSIQNVLLALAPCQGL*SESRRP
Trigger: CGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGG...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp AAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACTTGCGCCTGCTGAGCCCTaGCAAGGATTATGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: KDYALRAGGRFVSVQRELAPAEP*QGLCSE
Trigger: CTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGC...AAGTTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp TCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGGCGCCTGCTGAGCCCTaGCAAGGATTATGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SSRRVALLPLVREECVCVAPAEP*QGLCSE
Trigger: CTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGC...CACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp CCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCGCTAACCTCAGAGGTTaGTATGAGGGTCACTATGAT +
Preference number: 4 (lower is better)
Translates to: PAEPCQGLCSESRRPFCLANLRG*YEGHYD
Trigger: ATCATAGTGACCCTCATAGCAACCTCTGAGGTTAGC...GAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp AGGTGTGCTATGCAGGCAGCTCTGGGGGCTCTTGGAGCCGCCTCTAAGCAAACAGTTTATTCCCTTACTTaGGAGGAAAGAGGAACCGAG +
Preference number: 4 (lower is better)
Translates to: RCAMQAALGALGAASKQTVYSLT*EERGTE
Trigger: CTCGGTTCCTCTTTCCTCCCAAGTAAGGGAATAAAC...TGTTTGCTTAGAGGCGGCTCCAAGAGCCCCCAGAGCTGCCTGCATAGCACACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp GGTCTCTTCGTTCATAATAGGGAGCTACTTTCATTCCCCTTAACCCTTGTGATCCACTTGGTTGCGCGGTaGCCCGGGGCGCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GLFVHNRELLSFPLTLVIHLVAR*PGALLL
Trigger: AAGAAGGAGCGCCCCGGGCCACCGCGCAACCAAGTG...GATCACAAGGGTTAAGGGGAATGAAAGTAGCTCCCTATTATGAACGAAGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp AGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAATCCCACTCCAGGTACTaGGCAATATGCAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: SLLLASVHEETCRAGRKKSHSRY*AICSIW
Trigger: CCAAATGCTGCATATTGCCCAGTACCTGGAGTGGGA...TTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGTCCAGCAATGGGATGGTaGTCATCCCTCCATGGACCC +
Preference number: 4 (lower is better)
Translates to: ALALLGVYPLLKQNVWQGPAMGW*SSLHGP
Trigger: GGGTCCATGGAGGGATGACCACCATCCCATTGCTGG...ACCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCGGACCAGCAATGGGATaGTGGTCATCCCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: SVHEETCRAGRKKGGFPFGPAMG*WSSLHG
Trigger: TCCATGGAGGGATGACCACCATCCCATTGCTGGTCC...GAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AGAAGGTTCCTGGAAAATAACAAGTGCCCACCGACGGCGCAGAAACCCAAGAATATCAGACTTCTCACCTaGCCTGTCCCGGGTGATGGG +
Preference number: 4 (lower is better)
Translates to: RRFLENNKCPPTAQKPKNIRLLT*PVPGDG
Trigger: CCCATCACCCGGGACAGGCCAGGTGAGAAGTCTGAT...ATTCTTGGGTTTCTGCGCCGTCGGTGGGCACTTGTTATTTTCCAGGAACCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR CCA 90 bp GTGAGTGCAAAGAAGCAGGAGGGAACCGTCTCCTGGTTTCCCCAGCAAAGTTCCAGGCAGGACAGCCACTaGTGGATGCTTTGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: VSAKKQEGTVSWFPQQSSRQDSH*WMLCKV
Trigger: AACTTTGCAAAGCATCCACCAGTGGCTGTCCTGCCT...GGAACTTTGCTGGGGAAACCAGGAGACGGTTCCCTCCTGCTTCTTTGCACTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp CTGGAACCAGAGCTCCTTCCCTTGGCCACATCTGATCTCACCATAGGCAGGAAATTTCTCCCCAGAGATTaGTGCCTCCGTACATGCTGG +
Preference number: 4 (lower is better)
Translates to: LEPELLPLATSDLTIGRKFLPRD*CLRTCW
Trigger: CCAGCATGTACGGAGGCACCAATCTCTGGGGAGAAA...TTTCCTGCCTATGGTGAGATCAGATGTGGCCAAGGGAAGGAGCTCTGGTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTCTCTCTTGGTTTAGCTaGTGTTTGGCACACTGTTTA +
Preference number: 4 (lower is better)
Translates to: VRLLSPAKDYALRAGGRFLSWFS*CLAHCL
Trigger: TAAACAGTGTGCCAAACACCAGCTAAACCAAGAGAG...AAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTTGGCTTTGCTTCCACTaGTTAGAGAAGAGTGTGTAT +
Preference number: 4 (lower is better)
Translates to: APAEPCQGLCSESRRPFCWLCFH*LEKSVY
Trigger: ATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCA...ACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCCCAGCCACAACCTCATaGGCCCTAAGTCCATTCAAA +
Preference number: 4 (lower is better)
Translates to: KGRPRNQRAPAEPCQGLCPATTS*ALSPFK
Trigger: TTTGAATGGACTTAGGGCCCATGAGGTTGTGGCTGG...GCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAACCAGCCACAACCTCATaGGCCCTAAGTCCATTCAAA +
Preference number: 4 (lower is better)
Translates to: SLLLASVHEETCRAGRKKPATTS*ALSPFK
Trigger: TTTGAATGGACTTAGGGCCCATGAGGTTGTGGCTGG...TTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACAGAGCTCCTTCCCTTaGCCACATCTGATCTCACCA +
Preference number: 4 (lower is better)
Translates to: AKDYALRAGGRFVSVQREQSSFP*PHLISP
Trigger: TGGTGAGATCAGATGTGGCCAAGGGAAGGAGCTCTG...TTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AGGTGTGCTATGCAGGCAGCTCTGGGGGCTCTTGGAGCCGCCTCTAAGCAAACATTTGTGCAAATTCTCTaGAACCAGAGCTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: RCAMQAALGALGAASKQTFVQIL*NQSSFP
Trigger: AGGGAAGGAGCTCTGGTTCCAGAGAATTTGCACAAA...TGTTTGCTTAGAGGCGGCTCCAAGAGCCCCCAGAGCTGCCTGCATAGCACACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR CCA 90 bp CGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGCCAGGAGAAGGTTCCTaGAAAATAACAAGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: RPRNQRAPAEPCQGLCSEPGEGS*KITSAH
Trigger: GTGGGCACTTGTTATTTTCCAGGAACCTTCTCCTGG...CTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR CCA 90 bp AATTCTGCTCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAATCCTCCCTGGCAACCTaGATCCAAGTGGACTCACTT +
Preference number: 4 (lower is better)
Translates to: NSAQGLWECGGCCLSQPQSSLAT*IQVDSL
Trigger: AAGTGAGTCCACTTGGATCCAGGTTGCCAGGGAGGA...TTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR CAA 72 bp CAGCCTTTCTGCCTCTTCAGCAGGTTCACGGAGAAGTaGTCACTCAAAGGACGACCAAGAAACCAACGTGCG +
Preference number: 4 (lower is better)
Translates to: QPFCLFSRFTEK*SLKGRPRNQRA
Trigger: CGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTTCTCCGTGAACCTGCTGAAGAGGCAGAAAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp AAATTCTGCTCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACACAAATTCTTCTGGAGTaGGGGAGACCCACCGTTCTT +
Preference number: 4 (lower is better)
Translates to: KFCSRPVGMWRLLPKPATQILLE*GRPTVL
Trigger: AAGAACGGTGGGTCTCCCTCACTCCAGAAGAATTTG...TGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp ACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTCTGTGTCTGGGCTTCTGGCTaGAGGCCAGGAAGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: TTSWALSPFKMFCWHWLCVWASG*RPGRGE
Trigger: CTCACCTCTTCCTGGCCTTCAGCCAGAAGCCCAGAC...ACAGAGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp CTGCCTAAGCCAGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTCTTCCTCTCTGGGGATaGCTTCCAGATGCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: LPKPATTSWALSPFKMFCLPLWG*LPDASG
Trigger: ACCGCTGGCATCTGGAAGTCATCCCCAGAGAGGAAG...ACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCTGGCTTAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp TCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGGTTCTTTGGGGTCAGTaGCACCCTTCCTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: SSRRVALLPLVREECVCVVLWGQ*HPSCFP
Trigger: GGGAAAGCAGGAAGGGTGTCACTGACCCCAAAGAAC...CACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp CCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCCACTGTTTAGTCTTTTaGACGGCTCTTCCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: PAEPCQGLCSESRRPFCLHCLVF*TALPSQ
Trigger: TTGAGAAGGAAGAGCCGTTCAAAAGACTAAACAGTG...GAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGTCCCTTGGCCACATCTaGTCTCACCATAGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GTGSVRGVPTVETECMARSLGHI*SHHRQE
Trigger: TTCCTGCCTATGGTGAGATCAGATGTGGCCAAGGGA...CCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GACCCCTCTGTCCTGGCTGGCAGTATCTTGCAGAAGACGCCTCAGTCCTTCTTGAAACACGCTTTGGCTTaGAAAAGAAAGAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: DPSVLAGSILQKTPQSFLKHALA*KRKKLG
Trigger: CCCCAGCTTCTTTCTTTTTCAAGCCAAAGCGTGTTT...CAAGAAGGACTGAGGCGTCTTCTGCAAGATACTGCCAGCCAGGACAGAGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp GCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGTCTTGTGACTCTCCACTaGGGTCATCCCTGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: ALALLGVYPLLKQNVWQGLVTLH*GHPCSQ
Trigger: TTGGCTGCAGGGATGACCTCAGTGGAGAGTCACAAG...ACCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp AAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACTTGGCACAGGCCTCGTCTaGTTTGGTGGCATTATCTGC +
Preference number: 4 (lower is better)
Translates to: KDYALRAGGRFVSVQRELGTGLV*FGGIIC
Trigger: GCAGATAATGCCACCAAAGCAGACGAGGCCTGTGCC...AAGTTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp GCTCTGGGGGCTCTTGGAGCCGCCTCTAAGCAAACATGTAGACACCAGGAGAAGTTGGTCTTCAGCTGGTaGTTGCTTCTCAGCCATATT +
Preference number: 4 (lower is better)
Translates to: ALGALGAASKQTCRHQEKLVFSW*LLLSHI
Trigger: AATATGGCTGAGAAGCAAGCACCAGCTGAAGACCAA...CTTCTCCTGGTGTCTACATGTTTGCTTAGAGGCGGCTCCAAGAGCCCCCAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR GCA 90 bp AAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACTTTCCACCCATGCGTGCTaGATCACCTCACCACTCCTT +
Preference number: 4 (lower is better)
Translates to: KDYALRAGGRFVSVQRELSTHAC*ITSPLL
Trigger: AAGGAGTGGTGAGGTGATGCAGCACGCATGGGTGGA...AAGTTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR GCA 90 bp TTGTTGGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCCTTCCACCCATGCGTaGTGCATCACCTCACCACTC +
Preference number: 4 (lower is better)
Translates to: LLALALLGVYPLLKQNVWPSTHA*CITSPL
Trigger: GAGTGGTGAGGTGATGCAGCACGCATGGGTGGAAGG...CCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCCAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR GCA 90 bp TTCATTCCCCTTAACCCTTGTGATCACCACAGGGAGATGCGTCCTGACAATGAAGTTCCCTTCCACCCATaGGTGCTGCATCACCTCACC +
Preference number: 4 (lower is better)
Translates to: FIPLNPCDHHREMRPDNEVPFHP*VLHHLT
Trigger: GGTGAGGTGATGCAGCACGCATGGGTGGAAGGGAAC...TTCATTGTCAGGACGCATCTCCCTGTGGTGATCACAAGGGTTAAGGGGAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp CTGCCTAAGCCAGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTGTTCCCTTCCACCCATaGGTGCTGCATCACCTCACC +
Preference number: 4 (lower is better)
Translates to: LPKPATTSWALSPFKMFCVPFHP*VLHHLT
Trigger: GGTGAGGTGATGCAGCACGCATGGGTGGAAGGGAAC...ACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCTGGCTTAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR GCA 90 bp AAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCACAGCCACTGGTGGATaGTTTGCAAAGTTGGCCTTA +
Preference number: 4 (lower is better)
Translates to: KLSLKGRPRNQRAPAEPCTATGG*FAKLAL
Trigger: TAAGGCCAACTTTGCAAAGCATCCACCAGTGGCTGT...GCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp AAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCACAGCCACTGGTGGATaGTTTGCAAAGTTGGCCTTA +
Preference number: 4 (lower is better)
Translates to: KGRPRNQRAPAEPCQGLCTATGG*FAKLAL
Trigger: TAAGGCCAACTTTGCAAAGCATCCACCAGTGGCTGT...GCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp AGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGATTTTTGTCAAGCTaGCCCCTTCATAACCTCCTC +
Preference number: 4 (lower is better)
Translates to: SLLLASVHEETCRAGRKKGFLSS*PLHNLL
Trigger: GAGGAGGTTATGAAGGGGGCAGCTTGACAAAAATCC...TTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp TTCATTCCCCTTAACCCTTGTGATCACCACAGGGAGATGCGTCCTGACAATGAAGGGATGACTTCCAGATaGCAGCGGTCCAGCATCACC +
Preference number: 4 (lower is better)
Translates to: FIPLNPCDHHREMRPDNEGMTSR*QRSSIT
Trigger: GGTGATGCTGGACCGCTGGCATCTGGAAGTCATCCC...TTCATTGTCAGGACGCATCTCCCTGTGGTGATCACAAGGGTTAAGGGGAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp GAGGCGCTCGTTTTCTTGTGTGGGGATATCCCATCCACGCATGTGCTGTACGTTGGTCGTGGAGTTTCTTaGAGGTCGCTGCAAAAGTCT +
Preference number: 4 (lower is better)
Translates to: EALVFLCGDIPSTHVLYVGRGVS*RSLQKS
Trigger: AGACTTTTGCAGCGACCTGCAAGAAACTCCACGACC...AACGTACAGCACATGCGTGGATGGGATATCCCCACACAAGAAAACGAGCGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp GGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGGAATGTGGAGGTTGCTaGCTAAGCCAGCCACAACCT +
Preference number: 4 (lower is better)
Translates to: GTGSVRGVPTVETECMARECGGC*LSQPQP
Trigger: AGGTTGTGGCTGGCTTAGGCAGCAACCTCCACATTC...CCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp TCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAACCTCATGGGTCCATGAGGAAACTTaGAGGGCTGGTAGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: SRPVGMWRLLPKPATTSWVHEET*RAGRKK
Trigger: TTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGAC...CCATGAGGTTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp TGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGATTTCCACAGCCTTTCTaGCTCTTCAGCAGGTTCACG +
Preference number: 4 (lower is better)
Translates to: CQGLCSESRRPFCLCTEGFPQPF*LFSRFT
Trigger: CGTGAACCTGCTGAAGAGGCAGAAAGGCTGTGGAAA...TCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp AAATTCTGCTCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACATTTCCACAGCCTTTCTaGCTCTTCAGCAGGTTCACG +
Preference number: 4 (lower is better)
Translates to: KFCSRPVGMWRLLPKPATFPQPF*LFSRFT
Trigger: CGTGAACCTGCTGAAGAGGCAGAAAGGCTGTGGAAA...TGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp GTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTTTGATAATTCACATTTaGGGTGAAACTCACCACTCC +
Preference number: 4 (lower is better)
Translates to: VRLLSPAKDYALRAGGRFLIIHI*GETHHS
Trigger: GGAGTGGTGAGTTTCACCGCAAATGTGAATTATCAA...AAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCAC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000382164.8
CDS-3UTR CCA 90 bp TCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAACCTCATGGCTTTCAGGAGACTTCTaGGAGCACTCAAGTGTATAC +
Preference number: 4 (lower is better)
Translates to: SRPVGMWRLLPKPATTSWLSGDF*EHSSVY
Trigger: GTATACACTTGAGTGCTCCCAGAAGTCTCCTGAAAG...CCATGAGGTTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AATTCTGCTCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAATTGGTCAAATTCTTCTaGAGTGAGGGAGACCCACCG +
Preference number: 4 (lower is better)
Translates to: NSAQGLWECGGCCLSQPQLVKFF*SEGDPP
Trigger: CGGTGGGTCTCCCTCACTCCAGAAGAATTTGACCAA...TTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp TTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGAGGTGAGTGCTCAGTaGCTGGGGAAGGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: FSSRRVALLPLVREECVCEVSAQ*LGKVHL
Trigger: GAGGTGGACCTTCCCCAGCCACTGAGCACTCACCTC...ACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GGTCTCTTCGTTCATAATAGGGAGCTACTTTCATTCCCCTTAACCCTTGTGATCTGGCCTCACTGTTGCTaGCTCCCTCCGTCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GLFVHNRELLSFPLTLVIWPHCC*LPPSGG
Trigger: ACCACCCGACGGAGGGAGCCAGCAACAGTGAGGCCA...GATCACAAGGGTTAAGGGGAATGAAAGTAGCTCCCTATTATGAACGAAGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp CACACACACACGCGCGCACACACGTTAAGACCATCAGAAGGTCCTTCAGGTCATCACTTGGTCTTCAGCTaGTGCTTGCTTCTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: HTHTRAHTLRPSEGPSGHHLVFS*CLLLSH
Trigger: ATGGCTGAGAAGCAAGCACCAGCTGAAGACCAAGTG...ATGACCTGAAGGACCTTCTGATGGTCTTAACGTGTGTGCGCGCGTGTGTGTGTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp GGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGGTGGTCATCCCTCCATaGACCCATTCCTGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: GTGSVRGVPTVETECMARVVIPP*THSCRD
Trigger: GTCTCTACAGGAATGGGTCCATGGAGGGATGACCAC...CCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACTTGGACCAGCAATGGGATaGTGGTCATCCCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: KDYALRAGGRFVSVQRELGPAMG*WSSLHG
Trigger: TCCATGGAGGGATGACCACCATCCCATTGCTGGTCC...AAGTTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp ACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTACAGGAGGACCAGCAATaGGATGGTGGTCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: TFSSRRVALLPLVREECVQEDQQ*DGGHPS
Trigger: GGAGGGATGACCACCATCCCATTGCTGGTCCTCCTG...TACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp TCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGGTGGGCAGTAAGATGTaGTCTCTGAGTTCCCCACCG +
Preference number: 4 (lower is better)
Translates to: SSRRVALLPLVREECVCVVGSKM*SLSSPP
Trigger: CGGTGGGGAACTCAGAGACCACATCTTACTGCCCAC...CACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGATGCTGTATGGGACCTaGTCCCCGTTTTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: GTGSVRGVPTVETECMARMLYGT*SPFSTS
Trigger: GGAAGTGGAAAACGGGGACCAGGTCCCATACAGCAT...CCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCCACTCCAACTCAATGTaGTCGTGGAGTTTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: KGRPRNQRAPAEPCQGLCHSNSM*SWSFLQ
Trigger: CTGCAAGAAACTCCACGACCACATTGAGTTGGAGTG...GCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCAAGAAGCTGCTCTTCTaGGGAGGCCCCATCATCATG +
Preference number: 4 (lower is better)
Translates to: SVHEETCRAGRKKGGFPFKKLLF*GGPIIM
Trigger: CATGATGATGGGGCCTCCCCAGAAGAGCAGCTTCTT...GAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp TCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAACCTCATGGTTTGTGCAAATTCTCTaGAACCAGAGCTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SRPVGMWRLLPKPATTSWFVQIL*NQSSFP
Trigger: AGGGAAGGAGCTCTGGTTCCAGAGAATTTGCACAAA...CCATGAGGTTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GAGGCGCTCGTTTTCTTGTGTGGGGATATCCCATCCACGCATGTGCTGTACGTTTCTGCCACCAGGGCTTaGAACTCAAACAGGAAACAC +
Preference number: 4 (lower is better)
Translates to: EALVFLCGDIPSTHVLYVSATRA*NSNRKH
Trigger: GTGTTTCCTGTTTGAGTTCCAAGCCCTGGTGGCAGA...AACGTACAGCACATGCGTGGATGGGATATCCCCACACAAGAAAACGAGCGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp AGAAGGTTCCTGGAAAATAACAAGTGCCCACCGACGGCGCAGAAACCCAAGAATGAGGGAACCGTCTCCTaGTTTCCCCAGCAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: RRFLENNKCPPTAQKPKNEGTVS*FPQQSS
Trigger: GGAACTTTGCTGGGGAAACCAGGAGACGGTTCCCTC...ATTCTTGGGTTTCTGCGCCGTCGGTGGGCACTTGTTATTTTCCAGGAACCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp AGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAATTAGAGGCAGCTCAGTaGAACGATATCAAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: SLLLASVHEETCRAGRKKLEAAQ*NDIKWV
Trigger: GACCCACTTGATATCGTTCCACTGAGCTGCCTCTAA...TTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp CCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCCTTGGAGGAATATTCTaGATATTTCTGGAGTTGGTC +
Preference number: 4 (lower is better)
Translates to: PAEPCQGLCSESRRPFCLLGGIF*IFLELV
Trigger: GACCAACTCCAGAAATATTCAGAATATTCCTCCAAG...GAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAAAGTAGGTTGGTTTCTTaGAGTGCTTCATGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: AKDYALRAGGRFVSVQRESRLVS*SASWSR
Trigger: CCTGGACCATGAAGCACTTCAAGAAACCAACCTACT...TTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGTGTAAGATGTGGTCTCTaGGTTCCCCACCGTCACACA +
Preference number: 4 (lower is better)
Translates to: ALALLGVYPLLKQNVWQGVRCGL*VPHRHT
Trigger: TGTGTGACGGTGGGGAACTCAGAGACCACATCTTAC...ACCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTTCTTCATCCTGCTGTTaGATTTTTCAGGATGTTTCT +
Preference number: 4 (lower is better)
Translates to: APAEPCQGLCSESRRPFCSSSCC*IFQDVS
Trigger: AGAAACATCCTGAAAAATTCAACAGCAGGATGAAGA...ACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp AATTCTGCTCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAAACATGCTGGGAATGTTaGGAATGGCAATGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: NSAQGLWECGGCCLSQPQTCWEC*EWQCLP
Trigger: TGGAAGGCATTGCCATTCTCAACATTCCCAGCATGT...TTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp CTGCCTAAGCCAGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTGTTCTTTGGGGTCAGTaGCACCCTTCCTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: LPKPATTSWALSPFKMFCVLWGQ*HPSCFP
Trigger: GGGAAAGCAGGAAGGGTGTCACTGACCCCAAAGAAC...ACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCTGGCTTAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp TCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGACACTGTTTAGTCTTTTaGACGGCTCTTCCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: SLKGRPRNQRAPAEPCQGHCLVF*TALPSQ
Trigger: TTGAGAAGGAAGAGCCGTTCAAAAGACTAAACAGTG...TCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp AGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCGAATGTATGGCAAGGTaGCGTTTTCTTCCCGAAGGG +
Preference number: 4 (lower is better)
Translates to: SVHEETCRAGRKKGGFPFECMAR*RFLPEG
Trigger: CCCTTCGGGAAGAAAACGTCACCTTGCCATACATTC...GAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGGAATGTATGGCAAGGTaGCGTTTTCTTCCCGAAGGG +
Preference number: 4 (lower is better)
Translates to: GTGSVRGVPTVETECMARECMAR*RFLPEG
Trigger: CCCTTCGGGAAGAAAACGTCACCTTGCCATACATTC...CCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp AAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACTTTCCCTTGGCCACATCTaGTCTCACCATAGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: KDYALRAGGRFVSVQRELSLGHI*SHHRQE
Trigger: TTCCTGCCTATGGTGAGATCAGATGTGGCCAAGGGA...AAGTTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGTGTGTGTGTGCACTGGCACTTGCTGAATaGAGCCCACTGAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VALLPLVREECVCVCVCALALAE*SPLSSA
Trigger: AGCAGAGCTCAGTGGGCTTCATTCAGCAAGTGCCAG...TGCACACACACACACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp TCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATCTTCAGCTGGTGCTTaGTTCTCAGCCATATTTGAT +
Preference number: 4 (lower is better)
Translates to: SLKGRPRNQRAPAEPCQGSSAGA*FSAIFD
Trigger: ATCAAATATGGCTGAGAAGCAAGCACCAGCTGAAGA...TCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp AGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAATTGGTCTTCAGCTGGTaGTTGCTTCTCAGCCATATT +
Preference number: 4 (lower is better)
Translates to: SLLLASVHEETCRAGRKKLVFSW*LLLSHI
Trigger: AATATGGCTGAGAAGCAAGCACCAGCTGAAGACCAA...TTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp CCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGTGTATTTACAGTAAGTaGAGCACAGGCCTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: PAKDYALRAGGRFVSVQRCIYSK*STGLAC
Trigger: GCAAGCAAGGCCTGTGCTGCACTTACTGTAAATACA...CCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp TTGAAACAGAATGTATGGCAAGGTGACGTTTTCTTCCCGAAGGGTGGCTTTGCTGGGATGACTTCCAGATaGCAGCGGTCCAGCATCACC +
Preference number: 4 (lower is better)
Translates to: LKQNVWQGDVFFPKGGFAGMTSR*QRSSIT
Trigger: GGTGATGCTGGACCGCTGGCATCTGGAAGTCATCCC...AGCAAAGCCACCCTTCGGGAAGAAAACGTCACCTTGCCATACATTCTGTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp GGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGCACATGGAATCTGTGTaGAATGGAAGCGTCCACACC +
Preference number: 4 (lower is better)
Translates to: GTGSVRGVPTVETECMARHMESV*NGSVHT
Trigger: GGTGTGGACGCTTCCATTGCACACAGATTCCATGTG...CCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp TTGTTGGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCTTCCAGGAAGATGTTaGTCAGGTCCACCCCAACCC +
Preference number: 4 (lower is better)
Translates to: LLALALLGVYPLLKQNVWLPGRC*SGPPQP
Trigger: GGGTTGGGGTGGACCTGAGCAACATCTTCCTGGAAG...CCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCCAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp ATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCAGTCTCACTTCCAGGAAGATGTTaGTCAGGTCCACCCCAACCC +
Preference number: 4 (lower is better)
Translates to: MRKLAGLVERKGDFPSVSLPGRC*SGPPQP
Trigger: GGGTTGGGGTGGACCTGAGCAACATCTTCCTGGAAG...TGAGACTGAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp ACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTACTTCCAGGAAGATGTTaGTCAGGTCCACCCCAACCC +
Preference number: 4 (lower is better)
Translates to: TFSSRRVALLPLVREECVLPGRC*SGPPQP
Trigger: GGGTTGGGGTGGACCTGAGCAACATCTTCCTGGAAG...TACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp TTGTTGGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCTCCCCAGAGATTGGTaGCTCCGTACATGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LLALALLGVYPLLKQNVWLPRDW*LRTCWE
Trigger: TTCCCAGCATGTACGGAGGCACCAATCTCTGGGGAG...CCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCCAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp ATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCAGTCTCATCAACGAGAAGAAGCTaGTCTTCTGGGGAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: MRKLAGLVERKGDFPSVSSTRRS*SSGEAP
Trigger: TGGGGCCTCCCCAGAAGAGCAGCTTCTTCTCGTTGA...TGAGACTGAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp TCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGGAATGTGGAGGTTGCTaGCTAAGCCAGCCACAACCT +
Preference number: 4 (lower is better)
Translates to: SSRRVALLPLVREECVCVECGGC*LSQPQP
Trigger: AGGTTGTGGCTGGCTTAGGCAGCAACCTCCACATTC...CACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp AGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAAGTCTCAGAAAATTCTaGTCAAGGCCTGTGGGAATG +
Preference number: 4 (lower is better)
Translates to: SLLLASVHEETCRAGRKKSLRKF*SRPVGM
Trigger: CATTCCCACAGGCCTTGAGCAGAATTTTCTGAGACT...TTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp CACACACACACGCGCGCACACACGTTAAGACCATCAGAAGGTCCTTCAGGTCATCACCTACTCTCAAGCTaGATTAGCCAAGACACCATG +
Preference number: 4 (lower is better)
Translates to: HTHTRAHTLRPSEGPSGHHLLSS*ISQDTM
Trigger: CATGGTGTCTTGGCTAATGCAGCTTGAGAGTAGGTG...ATGACCTGAAGGACCTTCTGATGGTCTTAACGTGTGTGCGCGCGTGTGTGTGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp AAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCCTTTCAGGAGACTTCTaGGAGCACTCAAGTGTATAC +
Preference number: 4 (lower is better)
Translates to: KGRPRNQRAPAEPCQGLCLSGDF*EHSSVY
Trigger: GTATACACTTGAGTGCTCCCAGAAGTCTCCTGAAAG...GCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GTGAGTGCAAAGAAGCAGGAGGGAACCGTCTCCTGGTTTCCCCAGCAAAGTTCCCCTCGTCTGCTTTGGTaGCATTATCTGCATTCTGTA +
Preference number: 4 (lower is better)
Translates to: VSAKKQEGTVSWFPQQSSPRLLW*HYLHSV
Trigger: TACAGAATGCAGATAATGCCACCAAAGCAGACGAGG...GGAACTTTGCTGGGGAAACCAGGAGACGGTTCCCTCCTGCTTCTTTGCACTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp AGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAACCTCGTCTGCTTTGGTaGCATTATCTGCATTCTGTA +
Preference number: 4 (lower is better)
Translates to: SLLLASVHEETCRAGRKKPRLLW*HYLHSV
Trigger: TACAGAATGCAGATAATGCCACCAAAGCAGACGAGG...TTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACTTCAATCCATCTCCGCTTaGTCCAGGAGACCGTTCTCA +
Preference number: 4 (lower is better)
Translates to: KDYALRAGGRFVSVQRELQSISA*SRRPFS
Trigger: TGAGAACGGTCTCCTGGACCAAGCGGAGATGGATTG...AAGTTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AAATTCTGCTCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAAACCAGGAATGTTTCTaGACACACAGCGTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: KFCSRPVGMWRLLPKPATNQECF*THSVRG
Trigger: TCCACGAACGCTGTGTGTCCAGAAACATTCCTGGTT...TGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp ATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCAGTCTCAGTGGGCAGTAAGATGTaGTCTCTGAGTTCCCCACCG +
Preference number: 4 (lower is better)
Translates to: MRKLAGLVERKGDFPSVSVGSKM*SLSSPP
Trigger: CGGTGGGGAACTCAGAGACCACATCTTACTGCCCAC...TGAGACTGAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGTGTGTGTGTGCAGTGGGCAGTAAGATGTaGTCTCTGAGTTCCCCACCG +
Preference number: 4 (lower is better)
Translates to: VALLPLVREECVCVCVCAVGSKM*SLSSPP
Trigger: CGGTGGGGAACTCAGAGACCACATCTTACTGCCCAC...TGCACACACACACACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGTTTTCTCCCCAGAGATTaGTGCCTCCGTACATGCTGG +
Preference number: 4 (lower is better)
Translates to: ALALLGVYPLLKQNVWQGFLPRD*CLRTCW
Trigger: CCAGCATGTACGGAGGCACCAATCTCTGGGGAGAAA...ACCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GAGGCGCTCGTTTTCTTGTGTGGGGATATCCCATCCACGCATGTGCTGTACGTTTTTAATCGTGCAACATaGCTGCATCCAGGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: EALVFLCGDIPSTHVLYVFNRAT*LHPGFS
Trigger: GGAGAACCCTGGATGCAGCCATGTTGCACGATTAAA...AACGTACAGCACATGCGTGGATGGGATATCCCCACACAAGAAAACGAGCGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp GTTCACGGAGAAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTTTAATCGTGCAACATaGCTGCATCCAGGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: VHGEVVTQRTTKKPTCACFNRAT*LHPGFS
Trigger: GGAGAACCCTGGATGCAGCCATGTTGCACGATTAAA...GCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTTCTCCGTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GTTCACGGAGAAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTTTCTTCCCGAAGGGTaGCTTTGCTTCCACTGGTTA +
Preference number: 4 (lower is better)
Translates to: VHGEVVTQRTTKKPTCACFLPEG*LCFHWL
Trigger: TAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAA...GCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTTCTCCGTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAATTTCTTCCCGAAGGGTaGCTTTGCTTCCACTGGTTA +
Preference number: 4 (lower is better)
Translates to: AKDYALRAGGRFVSVQREFLPEG*LCFHWL
Trigger: TAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAA...TTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTGAGACCCCTCTGTCCTaGCTGGCAGTATCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: SHNLMGPKSIQNVLLALAETPLS*LAVSCR
Trigger: TCTGCAAGATACTGCCAGCCAGGACAGAGGGGTCTC...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp CGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGTGGAACGATATCAAGTaGGTCCAAGTTTCCACTGAT +
Preference number: 4 (lower is better)
Translates to: RPRNQRAPAEPCQGLCSEWNDIK*VQVSTD
Trigger: ATCAGTGGAAACTTGGACCCACTTGATATCGTTCCA...CTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp AGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCCATAGAGGCGAAACATaGACTCCAGCTTATCCTGAG +
Preference number: 4 (lower is better)
Translates to: SVHEETCRAGRKKGGFPFHRGET*TPAYPE
Trigger: CTCAGGATAAGCTGGAGTTCATGTTTCGCCTCTATG...GAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAATATGCAGCATTTGGTTaGCAATGCAATCCATCTCCG +
Preference number: 4 (lower is better)
Translates to: AKDYALRAGGRFVSVQREYAAFG*QCNPSP
Trigger: CGGAGATGGATTGCATTGTCAACCAAATGCTGCATA...TTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp TGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGATATGCAGCATTTGGTTaGCAATGCAATCCATCTCCG +
Preference number: 4 (lower is better)
Translates to: CQGLCSESRRPFCLCTEGYAAFG*QCNPSP
Trigger: CGGAGATGGATTGCATTGTCAACCAAATGCTGCATA...TCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGAGTAGGTTGGTTTCTTaGAGTGCTTCATGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GTGSVRGVPTVETECMARSRLVS*SASWSR
Trigger: CCTGGACCATGAAGCACTTCAAGAAACCAACCTACT...CCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp AAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACTTCACTCTGGTAGCACTTaGTACTTTTGTGGCACCGGT +
Preference number: 4 (lower is better)
Translates to: KDYALRAGGRFVSVQRELHSGST*YFCGTG
Trigger: ACCGGTGCCACAAAAGTATCAAGTGCTACCAGAGTG...AAGTTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR TCA 90 bp AATGTATGGCAAGGTGACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTGAATGTATGGCAAGGTaGCGTTTTCTTCCCGAAGGG +
Preference number: 4 (lower is better)
Translates to: NVWQGDVFFPKGGFASTGECMAR*RFLPEG
Trigger: CCCTTCGGGAAGAAAACGTCACCTTGCCATACATTC...ACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGTCACCTTGCCATACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp AATGTATGGCAAGGTGACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTCTTGGGGATCATGGCTaGAACACATGCACGAACTTC +
Preference number: 4 (lower is better)
Translates to: NVWQGDVFFPKGGFASTGLGDHG*NTCTNF
Trigger: GAAGTTCGTGCATGTGTTTCAGCCATGATCCCCAAG...ACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGTCACCTTGCCATACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp AGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAACTAACCATGTGGCTTTaGGAAGTCACTAAACCTCAT +
Preference number: 4 (lower is better)
Translates to: SLLLASVHEETCRAGRKKLTMWL*EVTKPH
Trigger: ATGAGGTTTAGTGACTTCTCAAAGCCACATGGTTAG...TTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp GGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGGGCTCATTGCAGGTTTaGGATGTAAGCCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: GTGSVRGVPTVETECMARGSLQV*DVSLSG
Trigger: TCCTGAAAGGCTTACATCGCAAACCTGCAATGAGCC...CCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp CAGCATGAGGCGCTCGTTTTCTTGTGTGGGGATATCCCATCCACGCATGTGCTGAGGTACTGGGCAATATaGAGCATTTGGTTGACAATG +
Preference number: 4 (lower is better)
Translates to: QHEALVFLCGDIPSTHVLRYWAI*SIWLTM
Trigger: CATTGTCAACCAAATGCTGCATATTGCCCAGTACCT...CAGCACATGCGTGGATGGGATATCCCCACACAAGAAAACGAGCGCCTCATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp AATTCTGCTCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAATGTATTTACAGTAAGTaGAGCACAGGCCTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: NSAQGLWECGGCCLSQPQCIYSK*STGLAC
Trigger: GCAAGCAAGGCCTGTGCTGCACTTACTGTAAATACA...TTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp AAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCTTGATAATTCACATTTaGGGTGAAACGTCATCCGGC +
Preference number: 4 (lower is better)
Translates to: KLSLKGRPRNQRAPAEPCLIIHI*GETSSG
Trigger: GCCGGATGACGTTTCACCGCAAATGTGAATTATCAA...GCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR GCA 90 bp CGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGTTGGCCTTATCAATaGAATCCAAAATCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: RPRNQRAPAEPCQGLCSESWPYQ*NPKSSQ
Trigger: TTGGCTGGATTTTGGATTGCATTGATAAGGCCAACT...CTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp ACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATTTCTTGCAGGTCGCTaGAAAAGTCTCCGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: TFSSRRVALLPLVREECVFLAGR*KSLRGA
Trigger: GGCACCTCGGAGACTTTTGCAGCGACCTGCAAGAAA...TACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp TTCATTCCCCTTAACCCTTGTGATCACCACAGGGAGATGCGTCCTGACAATGAATGGGAATGTGGAGGTTaGTGCCTAAGCCAGCCACAA +
Preference number: 4 (lower is better)
Translates to: FIPLNPCDHHREMRPDNEWECGG*CLSQPQ
Trigger: TTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCA...TTCATTGTCAGGACGCATCTCCCTGTGGTGATCACAAGGGTTAAGGGGAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp CTGGAACCAGAGCTCCTTCCCTTGGCCACATCTGATCTCACCATAGGCAGGAAAAGTCTCAGAAAATTCTaGTCAAGGCCTGTGGGAATG +
Preference number: 4 (lower is better)
Translates to: LEPELLPLATSDLTIGRKSLRKF*SRPVGM
Trigger: CATTCCCACAGGCCTTGAGCAGAATTTTCTGAGACT...TTTCCTGCCTATGGTGAGATCAGATGTGGCCAAGGGAAGGAGCTCTGGTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp TCTGTAAATGTCTTAGAATCAGTGACCCCAAACCTGAACCTGCCTCAGTTTCAGGCGCCTGCTGAGCCCTaGCAAGGATTATGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SVNVLESVTPNLNLPQFQAPAEP*QGLCSE
Trigger: CTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGC...CTGAAACTGAGGCAGGTTCAGGTTTGGGGTCACTGATTCTAAGACATTTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp ATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCAGTCTCAACCACATCTAAGGTGTaGTATGCAGGCAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: MRKLAGLVERKGDFPSVSTTSKV*YAGSSG
Trigger: CCCAGAGCTGCCTGCATAGCACACCTTAGATGTGGT...TGAGACTGAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR GCA 90 bp ACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGGCTGGCAGTATCTTaGAGAAGACGCCTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: TFSSRRVALLPLVREECVWLAVS*RRRLSP
Trigger: AGGACTGAGGCGTCTTCTGCAAGATACTGCCAGCCA...TACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp TCTGTAAATGTCTTAGAATCAGTGACCCCAAACCTGAACCTGCCTCAGTTTCAGGGCCCAATGAAGCTCTaGATGGCCTTGCCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: SVNVLESVTPNLNLPQFQGPMKL*MALPLG
Trigger: TCCCAAGGGCAAGGCCATGCAGAGCTTCATTGGGCC...CTGAAACTGAGGCAGGTTCAGGTTTGGGGTCACTGATTCTAAGACATTTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTGGCCATTTTCTGCACTaGCCCTTCATGAGACCTGTG +
Preference number: 4 (lower is better)
Translates to: SHNLMGPKSIQNVLLALAGHFLH*PFMRPV
Trigger: CACAGGTCTCATGAAGGGGCAGTGCAGAAAATGGCC...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp AAAGATATTCTTCAGGTGGCCTGGTTTTCCCCTTACTTAGCATTCTGCACTGTTTTCACTAGGCTGAAGTaGAGGCCCAGCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: KDILQVAWFSPYLAFCTVFTRLK*RPSPGP
Trigger: AGGCCCTGGGCTGGGCCTCCACTTCAGCCTAGTGAA...AACAGTGCAGAATGCTAAGTAAGGGGAAAACCAGGCCACCTGAAGAATATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp TCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGTTGGTCAAATTCTTCTaGAGTGAGGGAGACCCACCG +
Preference number: 4 (lower is better)
Translates to: SSRRVALLPLVREECVCVLVKFF*SEGDPP
Trigger: CGGTGGGTCTCCCTCACTCCAGAAGAATTTGACCAA...CACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp ACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTACAATCCATCTCCGCTTaGTCCAGGAGACCGTTCTCA +
Preference number: 4 (lower is better)
Translates to: TFSSRRVALLPLVREECVQSISA*SRRPFS
Trigger: TGAGAACGGTCTCCTGGACCAAGCGGAGATGGATTG...TACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp TCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGAGAAGTTGCAGTAGGTTaGTTTCTTGAAGTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: SLKGRPRNQRAPAEPCQGEVAVG*FLEVLH
Trigger: ATGAAGCACTTCAAGAAACCAACCTACTGCAACTTC...TCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp TCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGACAAAACACGGAAGTCTaGAGTATCACGGAAAAAGTT +
Preference number: 4 (lower is better)
Translates to: SLKGRPRNQRAPAEPCQGQNTEV*SITEKV
Trigger: AACTTTTTCCGTGATACTCCAGACTTCCGTGTTTTG...TCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACTTAGGCAGGACAGCCACTaGTGGATGCTTTGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: KDYALRAGGRFVSVQRELRQDSH*WMLCKV
Trigger: AACTTTGCAAAGCATCCACCAGTGGCTGTCCTGCCT...AAGTTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTATGCTGTATGGGACCTaGTCCCCGTTTTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: SHNLMGPKSIQNVLLALAMLYGT*SPFSTS
Trigger: GGAAGTGGAAAACGGGGACCAGGTCCCATACAGCAT...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCCACTCCAACTCAATGTaGTCGTGGAGTTTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: SVHEETCRAGRKKGGFPFHSNSM*SWSFLQ
Trigger: CTGCAAGAAACTCCACGACCACATTGAGTTGGAGTG...GAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTTTTCTCCCCAGAGATTaGTGCCTCCGTACATGCTGG +
Preference number: 4 (lower is better)
Translates to: SHNLMGPKSIQNVLLALAFLPRD*CLRTCW
Trigger: CCAGCATGTACGGAGGCACCAATCTCTGGGGAGAAA...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp ACACACGCGCGCACACACGTTAAGACCATCAGAAGGTCCTTCAGGTCATACTCTTCCATCCACTTGCATTaGCAGCAGCTTGTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: THARTHVKTIRRSFRSYSSIHLH*QQLVCP
Trigger: AGGACAAACAAGCTGCTGCCAATGCAAGTGGATGGA...AGAGTATGACCTGAAGGACCTTCTGATGGTCTTAACGTGTGTGCGCGCGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTAAGAAGCTGCTCTTCTaGGGAGGCCCCATCATCATG +
Preference number: 4 (lower is better)
Translates to: SHNLMGPKSIQNVLLALAKKLLF*GGPIIM
Trigger: CATGATGATGGGGCCTCCCCAGAAGAGCAGCTTCTT...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAACTCTCTTGGTTTAGCTaGTGTTTGGCACACTGTTTA +
Preference number: 4 (lower is better)
Translates to: SLLLASVHEETCRAGRKKLSWFS*CLAHCL
Trigger: TAAACAGTGTGCCAAACACCAGCTAAACCAAGAGAG...TTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCTCTTGCTTTCTCTCTTaGTTTAGCTGGTGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: KLSLKGRPRNQRAPAEPCSCFLS*FSWCLA
Trigger: TGCCAAACACCAGCTAAACCAAGAGAGAAAGCAAGA...GCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp TTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTTCTGCTCAAGGCCTGTaGGAATGTGGAGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: FSSRRVALLPLVREECVCSAQGL*ECGGCC
Trigger: GCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGA...ACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp ACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTACAGAGCTCCTTCCCTTaGCCACATCTGATCTCACCA +
Preference number: 4 (lower is better)
Translates to: TFSSRRVALLPLVREECVQSSFP*PHLISP
Trigger: TGGTGAGATCAGATGTGGCCAAGGGAAGGAGCTCTG...TACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR CAA 72 bp CACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTaGTTGGCACTGGCTCTGTTAGGGGTGTACCCACTG +
Preference number: 4 (lower is better)
Translates to: HNLMGPKSIQNV*LALALLGVYPL
Trigger: CAGTGGGTACACCCCTAACAGAGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp ATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCAGTCTCACACTCTGGTAGCACTTaGTACTTTTGTGGCACCGGT +
Preference number: 4 (lower is better)
Translates to: MRKLAGLVERKGDFPSVSHSGST*YFCGTG
Trigger: ACCGGTGCCACAAAAGTATCAAGTGCTACCAGAGTG...TGAGACTGAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR TCA 90 bp ATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCAGTCTCAGGTGGAGTGGGGGAGTaGGAACCTTCTTTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: MRKLAGLVERKGDFPSVSGGVGE*EPSFSL
Trigger: TAAGGAAAAAGAAGGTTCTCACTCCCCCACTCCACC...TGAGACTGAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp AGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAACCATGGAAAAGTCTCTaGACTTTTCTGAGACTCAAT +
Preference number: 4 (lower is better)
Translates to: SLLLASVHEETCRAGRKKPWKSL*TFLRLN
Trigger: ATTGAGTCTCAGAAAAGTTCAGAGACTTTTCCATGG...TTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp GGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGGAAATGACCCTACTCTaGGATGTGTGGGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: GTGSVRGVPTVETECMAREMTLL*DVWVLF
Trigger: GAAAAGAACCCACACATCTCAGAGTAGGGTCATTTC...CCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp TGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAAGGTACTGGGCAATATaGAGCATTTGGTTGACAATG +
Preference number: 4 (lower is better)
Translates to: CQGLCSESRRPFCLCTEGRYWAI*SIWLTM
Trigger: CATTGTCAACCAAATGCTGCATATTGCCCAGTACCT...TCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp ATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCAGTCTCAGTTGGTTTCTTGAAGTaGTTCATGGTCCAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: MRKLAGLVERKGDFPSVSVGFLK*FMVQAC
Trigger: GCACGCCTGGACCATGAAGCACTTCAAGAAACCAAC...TGAGACTGAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp AAATTCTGCTCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACACAAAAGTCTCCGAGGTaGCAAATTCAAAGTACCACA +
Preference number: 4 (lower is better)
Translates to: KFCSRPVGMWRLLPKPATQKSPR*QIQSTT
Trigger: TGTGGTACTTTGAATTTGGCACCTCGGAGACTTTTG...TGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp GCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACAAAAGTCTCCGAGGTaGCAAATTCAAAGTACCACA +
Preference number: 4 (lower is better)
Translates to: AKDYALRAGGRFVSVQREQKSPR*QIQSTT
Trigger: TGTGGTACTTTGAATTTGGCACCTCGGAGACTTTTG...TTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp TCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGGGTTCTCCATCCACTTaGATTGGCAGCAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SSRRVALLPLVREECVCVGSPST*IGSSLF
Trigger: AAACAAGCTGCTGCCAATGCAAGTGGATGGAGAACC...CACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp GGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGAGTCTCAGAAAATTCTaGTCAAGGCCTGTGGGAATG +
Preference number: 4 (lower is better)
Translates to: GTGSVRGVPTVETECMARSLRKF*SRPVGM
Trigger: CATTCCCACAGGCCTTGAGCAGAATTTTCTGAGACT...CCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCCTTTCAGGAGACTTCTaGGAGCACTCAAGTGTATAC +
Preference number: 4 (lower is better)
Translates to: SVHEETCRAGRKKGGFPFLSGDF*EHSSVY
Trigger: GTATACACTTGAGTGCTCCCAGAAGTCTCCTGAAAG...GAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGGCTAATCGGCTCATGTaGGTCATATTGTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: GTGSVRGVPTVETECMARANRLM*VILFEA
Trigger: AGCCTCAAACAATATGACCCACATGAGCCGATTAGC...CCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGCAATATGCAGCATTTaGTTGACAATGCAATCCATC +
Preference number: 4 (lower is better)
Translates to: SLLLASVHEETCRAGRKKAICSI*LTMQSI
Trigger: GATGGATTGCATTGTCAACCAAATGCTGCATATTGC...TTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp ACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTCTGTGTGGTCATCCCTCCATaGACCCATTCCTGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: TTSWALSPFKMFCWHWLCVVIPP*THSCRD
Trigger: GTCTCTACAGGAATGGGTCCATGGAGGGATGACCAC...ACAGAGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACTTAACCAGGAATGTTTCTaGACACACAGCGTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: KDYALRAGGRFVSVQRELNQECF*THSVRG
Trigger: TCCACGAACGCTGTGTGTCCAGAAACATTCCTGGTT...AAGTTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp CTGCCTAAGCCAGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTGTTCATGATGCTGTATaGGACCTGGTCCCCGTTTTC +
Preference number: 4 (lower is better)
Translates to: LPKPATTSWALSPFKMFCVHDAV*DLVPVF
Trigger: GAAAACGGGGACCAGGTCCCATACAGCATCATGAAC...ACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCTGGCTTAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp TTGTTGGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGGTTCATGATGCTGTATaGGACCTGGTCCCCGTTTTC +
Preference number: 4 (lower is better)
Translates to: LLALALLGVYPLLKQNVWVHDAV*DLVPVF
Trigger: GAAAACGGGGACCAGGTCCCATACAGCATCATGAAC...CCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGTGTGTGTGTGCAGGAATCTGTGTGCAATaGAAGCGTCCACACCAATGG +
Preference number: 4 (lower is better)
Translates to: VALLPLVREECVCVCVCAGICVQ*KRPHQW
Trigger: CCATTGGTGTGGACGCTTCCATTGCACACAGATTCC...TGCACACACACACACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACTTCACTCCAACTCAATGTaGTCGTGGAGTTTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: KDYALRAGGRFVSVQRELHSNSM*SWSFLQ
Trigger: CTGCAAGAAACTCCACGACCACATTGAGTTGGAGTG...AAGTTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp TGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGACTCTCTTGGTTTAGCTaGTGTTTGGCACACTGTTTA +
Preference number: 4 (lower is better)
Translates to: CQGLCSESRRPFCLCTEGLSWFS*CLAHCL
Trigger: TAAACAGTGTGCCAAACACCAGCTAAACCAAGAGAG...TCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GATGGAGGCCCAATGAAGCTCTGCATGGCCTTGCCCTTGGGAAAGGATGGTAATTCTTGCTTTCTCTCTTaGTTTAGCTGGTGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: DGGPMKLCMALPLGKDGNSCFLS*FSWCLA
Trigger: TGCCAAACACCAGCTAAACCAAGAGAGAAAGCAAGA...ATTACCATCCTTTCCCAAGGGCAAGGCCATGCAGAGCTTCATTGGGCCTCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp GTTCACGGAGAAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGGCTTTGCTTCCACTaGTTAGAGAAGAGTGTGTAT +
Preference number: 4 (lower is better)
Translates to: VHGEVVTQRTTKKPTCACWLCFH*LEKSVY
Trigger: ATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCA...GCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTTCTCCGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp TTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTACGTTTGTTCCTCCCTaGCAACCTGGATCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: FSSRRVALLPLVREECVCTFVPP*QPGSKW
Trigger: CCACTTGGATCCAGGTTGCCAGGGAGGAACAAACGT...ACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp GCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAAAAGATATTCTTCAGGTaGCCTGGTTTTCCCCTTACT +
Preference number: 4 (lower is better)
Translates to: AKDYALRAGGRFVSVQREKIFFR*PGFPLT
Trigger: AGTAAGGGGAAAACCAGGCCACCTGAAGAATATCTT...TTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR CAA 72 bp TATGGCAAGGTGACGTTTTCTTCCCGAAGGGTGGCTTaGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTG +
Preference number: 4 (lower is better)
Translates to: YGKVTFSSRRVA*LPLVREECVCV
Trigger: CACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGTCACCTTGCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp AAAGATATTCTTCAGGTGGCCTGGTTTTCCCCTTACTTAGCATTCTGCACTGTTTTTTGTTCACTAGGCTaGAGTGGAGGCCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: KDILQVAWFSPYLAFCTVFCSLG*SGGPAQ
Trigger: CTGGGCTGGGCCTCCACTTCAGCCTAGTGAACAAAA...AACAGTGCAGAATGCTAAGTAAGGGGAAAACCAGGCCACCTGAAGAATATCTTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp AAATTCTGCTCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACACTTTTGAGTACGTTTTaGCACAACCAGGAATGTTTC +
Preference number: 4 (lower is better)
Translates to: KFCSRPVGMWRLLPKPATLLSTF*HNQECF
Trigger: GAAACATTCCTGGTTGTGTCAAAACGTACTCAAAAG...TGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp TTGTTGGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGACATGCTGGGAATGTTaGGAATGGCAATGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LLALALLGVYPLLKQNVWTCWEC*EWQCLP
Trigger: TGGAAGGCATTGCCATTCTCAACATTCCCAGCATGT...CCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCCAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp AGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCGAAGTGCAATTCCACTaGAGTTGTTATACTCCATGC +
Preference number: 4 (lower is better)
Translates to: SVHEETCRAGRKKGGFPFEVQFH*SCYTPC
Trigger: GCATGGAGTATAACAACTTCAGTGGAATTGCACTTC...GAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp ACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTAGGCTCATTGCAGGTTTaGGATGTAAGCCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: TFSSRRVALLPLVREECVGSLQV*DVSLSG
Trigger: TCCTGAAAGGCTTACATCGCAAACCTGCAATGAGCC...TACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp TTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTTGGTTTCTTGAAGTaGTTCATGGTCCAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: FSSRRVALLPLVREECVCVGFLK*FMVQAC
Trigger: GCACGCCTGGACCATGAAGCACTTCAAGAAACCAAC...ACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp GGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGTTGATAATTCACATTTaGGGTGAAACGTCATCCGGC +
Preference number: 4 (lower is better)
Translates to: GTGSVRGVPTVETECMARLIIHI*GETSSG
Trigger: GCCGGATGACGTTTCACCGCAAATGTGAATTATCAA...CCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR GCA 90 bp CTGGAACCAGAGCTCCTTCCCTTGGCCACATCTGATCTCACCATAGGCAGGAAAAGTTGGCCTTATCAATaGAATCCAAAATCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: LEPELLPLATSDLTIGRKSWPYQ*NPKSSQ
Trigger: TTGGCTGGATTTTGGATTGCATTGATAAGGCCAACT...TTTCCTGCCTATGGTGAGATCAGATGTGGCCAAGGGAAGGAGCTCTGGTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp TTGAAACAGAATGTATGGCAAGGTGACGTTTTCTTCCCGAAGGGTGGCTTTGCTGGTCGTGGAGTTTCTTaGAGGTCGCTGCAAAAGTCT +
Preference number: 4 (lower is better)
Translates to: LKQNVWQGDVFFPKGGFAGRGVS*RSLQKS
Trigger: AGACTTTTGCAGCGACCTGCAAGAAACTCCACGACC...AGCAAAGCCACCCTTCGGGAAGAAAACGTCACCTTGCCATACATTCTGTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp TTGTTGGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGGGTTCTCCATCCACTTaGATTGGCAGCAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: LLALALLGVYPLLKQNVWGSPST*IGSSLF
Trigger: AAACAAGCTGCTGCCAATGCAAGTGGATGGAGAACC...CCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCCAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp AATGTATGGCAAGGTGACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTGTCCATGAGGAAACTTaGAGGGCTGGTAGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: NVWQGDVFFPKGGFASTGVHEET*RAGRKK
Trigger: TTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGAC...ACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGTCACCTTGCCATACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp ACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTCTGTCTGGAAAATAACAAGTaGCCACCGACGGCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: TTSWALSPFKMFCWHWLCLENNK*PPTAQK
Trigger: TTTCTGCGCCGTCGGTGGGCACTTGTTATTTTCCAG...ACAGAGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR GCA 90 bp CAGCATGAGGCGCTCGTTTTCTTGTGTGGGGATATCCCATCCACGCATGTGCTGTCCTTCACAGTTAAGTaGCATTTGTACACACAATCT +
Preference number: 4 (lower is better)
Translates to: QHEALVFLCGDIPSTHVLSFTVK*HLYTQS
Trigger: AGATTGTGTGTACAAATGGCACTTAACTGTGAAGGA...CAGCACATGCGTGGATGGGATATCCCCACACAAGAAAACGAGCGCCTCATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp AATTCTGCTCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAAGCAATATGCAGCATTTaGTTGACAATGCAATCCATC +
Preference number: 4 (lower is better)
Translates to: NSAQGLWECGGCCLSQPQAICSI*LTMQSI
Trigger: GATGGATTGCATTGTCAACCAAATGCTGCATATTGC...TTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp ACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTCTGTTCCCACTCCAGGTACTaGGCAATATGCAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: TTSWALSPFKMFCWHWLCSHSRY*AICSIW
Trigger: CCAAATGCTGCATATTGCCCAGTACCTGGAGTGGGA...ACAGAGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GATGGAGGCCCAATGAAGCTCTGCATGGCCTTGCCCTTGGGAAAGGATGGTAATGAAGTTGCAGTAGGTTaGTTTCTTGAAGTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: DGGPMKLCMALPLGKDGNEVAVG*FLEVLH
Trigger: ATGAAGCACTTCAAGAAACCAACCTACTGCAACTTC...ATTACCATCCTTTCCCAAGGGCAAGGCCATGCAGAGCTTCATTGGGCCTCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp CTGCCTAAGCCAGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTAACCAGGAATGTTTCTaGACACACAGCGTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: LPKPATTSWALSPFKMFCNQECF*THSVRG
Trigger: TCCACGAACGCTGTGTGTCCAGAAACATTCCTGGTT...ACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCTGGCTTAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp ACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTCTGTAGGCAGGACAGCCACTaGTGGATGCTTTGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: TTSWALSPFKMFCWHWLCRQDSH*WMLCKV
Trigger: AACTTTGCAAAGCATCCACCAGTGGCTGTCCTGCCT...ACAGAGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AAGTGGACTCACTTTTCAGTGACCAGAAATGACCCTACTCTGAGATGTGTGGGTGTTCATGATGCTGTATaGGACCTGGTCCCCGTTTTC +
Preference number: 4 (lower is better)
Translates to: KWTHFSVTRNDPTLRCVGVHDAV*DLVPVF
Trigger: GAAAACGGGGACCAGGTCCCATACAGCATCATGAAC...ACCCACACATCTCAGAGTAGGGTCATTTCTGGTCACTGAAAAGTGAGTCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp ACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTCTGTGGAATCTGTGTGCAATaGAAGCGTCCACACCAATGG +
Preference number: 4 (lower is better)
Translates to: TTSWALSPFKMFCWHWLCGICVQ*KRPHQW
Trigger: CCATTGGTGTGGACGCTTCCATTGCACACAGATTCC...ACAGAGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp TTGTTGGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGAACTCAATGTGGTCGTaGAGTTTCTTGCAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: LLALALLGVYPLLKQNVWNSMWS*SFLQVA
Trigger: AGCGACCTGCAAGAAACTCCACGACCACATTGAGTT...CCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCCAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGTGTGTGTGTGCAAACTCAATGTGGTCGTaGAGTTTCTTGCAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: VALLPLVREECVCVCVCANSMWS*SFLQVA
Trigger: AGCGACCTGCAAGAAACTCCACGACCACATTGAGTT...TGCACACACACACACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp TTGTTGGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGTTTCTTCCCGAAGGGTaGCTTTGCTTCCACTGGTTA +
Preference number: 4 (lower is better)
Translates to: LLALALLGVYPLLKQNVWFLPEG*LCFHWL
Trigger: TAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAA...CCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCCAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp CCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGTTGAAACAGAATGTATaGCAAGGTGACGTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PAKDYALRAGGRFVSVQRLKQNV*QGDVFF
Trigger: GAAGAAAACGTCACCTTGCCATACATTCTGTTTCAA...CCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp TTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTCCAGCCACAACCTCATaGGCCCTAAGTCCATTCAAA +
Preference number: 4 (lower is better)
Translates to: FSSRRVALLPLVREECVCPATTS*ALSPFK
Trigger: TTTGAATGGACTTAGGGCCCATGAGGTTGTGGCTGG...ACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp GCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGTTTTGTGCAAATTCTCTaGAACCAGAGCTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: ALALLGVYPLLKQNVWQGFVQIL*NQSSFP
Trigger: AGGGAAGGAGCTCTGGTTCCAGAGAATTTGCACAAA...ACCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp TTGTTGGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCCAGGAGAAGGTTCCTaGAAAATAACAAGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: LLALALLGVYPLLKQNVWPGEGS*KITSAH
Trigger: GTGGGCACTTGTTATTTTCCAGGAACCTTCTCCTGG...CCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCCAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR CCA 90 bp GTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGTGTGTGTGTGCACAACCTGGATCCAAGTaGACTCACTTTTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: VALLPLVREECVCVCVCAQPGSK*THFSVT
Trigger: GGTCACTGAAAAGTGAGTCCACTTGGATCCAGGTTG...TGCACACACACACACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp ACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTAGATCTTGCTCCTAGGTaGTCCTTCACAGTTAAGTGC +
Preference number: 4 (lower is better)
Translates to: TFSSRRVALLPLVREECVDLAPR*SFTVKC
Trigger: GCACTTAACTGTGAAGGACCACCTAGGAGCAAGATC...TACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTGAGACCGTTCTCATCTaGATCATAGAGGCGAAACAT +
Preference number: 4 (lower is better)
Translates to: SHNLMGPKSIQNVLLALAETVLI*IIEAKH
Trigger: ATGTTTCGCCTCTATGATTCAGATGAGAACGGTCTC...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTTATGCAGCATTTGGTTaGCAATGCAATCCATCTCCG +
Preference number: 4 (lower is better)
Translates to: SHNLMGPKSIQNVLLALAYAAFG*QCNPSP
Trigger: CGGAGATGGATTGCATTGTCAACCAAATGCTGCATA...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GAGGCGCTCGTTTTCTTGTGTGGGGATATCCCATCCACGCATGTGCTGTACGTTTCTTCATCCTGCTGTTaGATTTTTCAGGATGTTTCT +
Preference number: 4 (lower is better)
Translates to: EALVFLCGDIPSTHVLYVSSSCC*IFQDVS
Trigger: AGAAACATCCTGAAAAATTCAACAGCAGGATGAAGA...AACGTACAGCACATGCGTGGATGGGATATCCCCACACAAGAAAACGAGCGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp ACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTCTGTGGGTGTACCCACTGTTaGAACAGAATGTATGGCAAG +
Preference number: 4 (lower is better)
Translates to: TTSWALSPFKMFCWHWLCGCTHC*NRMYGK
Trigger: CTTGCCATACATTCTGTTTCAACAGTGGGTACACCC...ACAGAGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp TTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTTCTGCACTGTTAGGTTaGGCAGAATGGTCCAAGATC +
Preference number: 4 (lower is better)
Translates to: FSSRRVALLPLVREECVCSALLG*AEWSKI
Trigger: GATCTTGGACCATTCTGCTCAACCTAACAGTGCAGA...ACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp CCTTCACAGTTAAGTGCCATTTGTACACACAATCTTAATATTCCCTTCTTTGTCGGGGTCTTCACCCTGTaGTCGGAGTTCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PSQLSAICTHNLNIPFFVGVFTL*SEFSSS
Trigger: GGAGCTGCTGAACTCCGAGCACAGGGTGAAGACCCC...GACAAAGAAGGGAATATTAAGATTGTGTGTACAAATGGCACTTAACTGTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp AGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCATGAGACAAGATCTCTaGTATTCCTTAGGCAACATC +
Preference number: 4 (lower is better)
Translates to: SVHEETCRAGRKKGGFPFMRQDL*YSLGNI
Trigger: GATGTTGCCTAAGGAATAGCAGAGATCTTGTCTCAT...GAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp ACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTCTGTGGCTCATTGCAGGTTTaGGATGTAAGCCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: TTSWALSPFKMFCWHWLCGSLQV*DVSLSG
Trigger: TCCTGAAAGGCTTACATCGCAAACCTGCAATGAGCC...ACAGAGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp AAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACTTCACTGGTGGATGCTTTaGAAAGTTGGCCTTATCAAT +
Preference number: 4 (lower is better)
Translates to: KDYALRAGGRFVSVQRELHWWML*KVGLIN
Trigger: ATTGATAAGGCCAACTTTGCAAAGCATCCACCAGTG...AAGTTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp AAGTGGACTCACTTTTCAGTGACCAGAAATGACCCTACTCTGAGATGTGTGGGTGGATTTTTGTCAAGCTaGCCCCTTCATAACCTCCTC +
Preference number: 4 (lower is better)
Translates to: KWTHFSVTRNDPTLRCVGGFLSS*PLHNLL
Trigger: GAGGAGGTTATGAAGGGGGCAGCTTGACAAAAATCC...ACCCACACATCTCAGAGTAGGGTCATTTCTGGTCACTGAAAAGTGAGTCCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp ACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTAGTCCATGAGGAAACTTaGAGGGCTGGTAGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: TFSSRRVALLPLVREECVVHEET*RAGRKK
Trigger: TTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGAC...TACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp CCTTCACAGTTAAGTGCCATTTGTACACACAATCTTAATATTCCCTTCTTTGTCCATAGGCAGGAAACCTaGAGCCTGCTCCTCGCGAGC +
Preference number: 4 (lower is better)
Translates to: PSQLSAICTHNLNIPFFVHRQET*SLLLAS
Trigger: GCTCGCGAGGAGCAGGCTGCAGGTTTCCTGCCTATG...GACAAAGAAGGGAATATTAAGATTGTGTGTACAAATGGCACTTAACTGTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp ACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTAAAAGCTCCTGTCCAATaGAAGATTAGAGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: TFSSRRVALLPLVREECVKAPVQ*KIRGSS
Trigger: TGAGCTGCCTCTAATCTTGCATTGGACAGGAGCTTT...TACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp TGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAGAATATTTCTGGAGTTaGTCAAATTCTTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: CQGLCSESRRPFCLCTEGEYFWS*SNSSGV
Trigger: CACTCCAGAAGAATTTGACCAACTCCAGAAATATTC...TCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp ACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTAGCTAATCGGCTCATGTaGGTCATATTGTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: TFSSRRVALLPLVREECVANRLM*VILFEA
Trigger: AGCCTCAAACAATATGACCCACATGAGCCGATTAGC...TACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp ACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTACCTCGTCTGCTTTGGTaGCATTATCTGCATTCTGTA +
Preference number: 4 (lower is better)
Translates to: TFSSRRVALLPLVREECVPRLLW*HYLHSV
Trigger: TACAGAATGCAGATAATGCCACCAAAGCAGACGAGG...TACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp ACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTCTGTCACTTGATACTTTTGTaGCACCGGTCACACTTGACG +
Preference number: 4 (lower is better)
Translates to: TTSWALSPFKMFCWHWLCHLILL*HRSHLT
Trigger: CGTCAAGTGTGACCGGTGCCACAAAAGTATCAAGTG...ACAGAGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR CCA 90 bp AATCAATTTCACCTGTTGATAGTGCCATGTCTCAATAGCCTCAATCTTGGGGATAGGCCTGTGGGAATGTaGAGGTTGCTGCCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: NQFHLLIVPCLNSLNLGDRPVGM*RLLPKP
Trigger: TGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCT...ATCCCCAAGATTGAGGCTATTGAGACATGGCACTATCAACAGGTGAAATTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp TTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTAATGAAACGGTGGAGTaGGGGAGTGAGAACCTTCTT +
Preference number: 4 (lower is better)
Translates to: FSSRRVALLPLVREECVCNETVE*GSENLL
Trigger: AAGAAGGTTCTCACTCCCCCACTCCACCGTTTCATT...ACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp GGTCTCTTCGTTCATAATAGGGAGCTACTTTCATTCCCCTTAACCCTTGTGATCGCTCGTTTTCTTGTGTaGGGATATCCCATCCACGCA +
Preference number: 4 (lower is better)
Translates to: GLFVHNRELLSFPLTLVIARFLV*GYPIHA
Trigger: TGCGTGGATGGGATATCCCCACACAAGAAAACGAGC...GATCACAAGGGTTAAGGGGAATGAAAGTAGCTCCCTATTATGAACGAAGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp ACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTAATTCTTCAGGTGGCCTaGTTTTCCCCTTACTTAGCA +
Preference number: 4 (lower is better)
Translates to: TFSSRRVALLPLVREECVILQVA*FSPYLA
Trigger: TGCTAAGTAAGGGGAAAACCAGGCCACCTGAAGAAT...TACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp TCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGAATTCTGGAGCTTGTTaGTCCCATCACCAAGAATAC +
Preference number: 4 (lower is better)
Translates to: SSRRVALLPLVREECVCVNSGAC*SHHQEY
Trigger: GTATTCTTGGTGATGGGACCAACAAGCTCCAGAATT...CACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp CAAGCAACATTGCAAGTCCTGTGCACTAGGGTGCAGCAGGTAAGGGCCATTTTCCTAAGGTTACCAAACTaGAAGTGCAATTCCACTGAA +
Preference number: 4 (lower is better)
Translates to: QATLQVLCTRVQQVRAIFLRLPN*KCNSTE
Trigger: TTCAGTGGAATTGCACTTCCAGTTTGGTAACCTTAG...GAAAATGGCCCTTACCTGCTGCACCCTAGTGCACAGGACTTGCAATGTTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp TCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGCTTTTGAGTACGTTTTaGCACAACCAGGAATGTTTC +
Preference number: 4 (lower is better)
Translates to: SSRRVALLPLVREECVCVLLSTF*HNQECF
Trigger: GAAACATTCCTGGTTGTGTCAAAACGTACTCAAAAG...CACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp AAGACCATCAGAAGGTCCTTCAGGTCATACTCTGGGAGTGGTGAGTGCAAAGAAAAACTTGTTTGGGGTTaGGCAGATAGTGGAATTTCC +
Preference number: 4 (lower is better)
Translates to: KTIRRSFRSYSGSGECKEKLVWG*ADSGIS
Trigger: GGAAATTCCACTATCTGCTCAACCCCAAACAAGTTT...TTCTTTGCACTCACCACTCCCAGAGTATGACCTGAAGGACCTTCTGATGGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp GGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGTCTTCATCCTGCTGTTaGATTTTTCAGGATGTTTCT +
Preference number: 4 (lower is better)
Translates to: GTGSVRGVPTVETECMARSSSCC*IFQDVS
Trigger: AGAAACATCCTGAAAAATTCAACAGCAGGATGAAGA...CCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp GTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGTGTGTGTGTGCACACTGTTTAGTCTTTTaGACGGCTCTTCCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: VALLPLVREECVCVCVCAHCLVF*TALPSQ
Trigger: TTGAGAAGGAAGAGCCGTTCAAAAGACTAAACAGTG...TGCACACACACACACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp TTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTTTCAGTGACCAGAAATaGCCCTACTCTGAGATGTGT +
Preference number: 4 (lower is better)
Translates to: FSSRRVALLPLVREECVCFSDQK*PYSEMC
Trigger: ACACATCTCAGAGTAGGGTCATTTCTGGTCACTGAA...ACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp GCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGTATGAGACAAGATCTCTaGTATTCCTTAGGCAACATC +
Preference number: 4 (lower is better)
Translates to: ALALLGVYPLLKQNVWQGMRQDL*YSLGNI
Trigger: GATGTTGCCTAAGGAATAGCAGAGATCTTGTCTCAT...ACCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp CTGCCTAAGCCAGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTCTTCAGCTGGTGCTTaGTTCTCAGCCATATTTGAT +
Preference number: 4 (lower is better)
Translates to: LPKPATTSWALSPFKMFCSSAGA*FSAIFD
Trigger: ATCAAATATGGCTGAGAAGCAAGCACCAGCTGAAGA...ACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCTGGCTTAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp ATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCAGTCTCATCTTCAGCTGGTGCTTaGTTCTCAGCCATATTTGAT +
Preference number: 4 (lower is better)
Translates to: MRKLAGLVERKGDFPSVSSSAGA*FSAIFD
Trigger: ATCAAATATGGCTGAGAAGCAAGCACCAGCTGAAGA...TGAGACTGAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp ACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTAAGGTACTGGGCAATATaGAGCATTTGGTTGACAATG +
Preference number: 4 (lower is better)
Translates to: TFSSRRVALLPLVREECVRYWAI*SIWLTM
Trigger: CATTGTCAACCAAATGCTGCATATTGCCCAGTACCT...TACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp GCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGTAGTTGGCCTTATCAATaGAATCCAAAATCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: ALALLGVYPLLKQNVWQGSWPYQ*NPKSSQ
Trigger: TTGGCTGGATTTTGGATTGCATTGATAAGGCCAACT...ACCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp TTGTTGGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCACTGGTGGATGCTTTaGAAAGTTGGCCTTATCAAT +
Preference number: 4 (lower is better)
Translates to: LLALALLGVYPLLKQNVWHWWML*KVGLIN
Trigger: ATTGATAAGGCCAACTTTGCAAAGCATCCACCAGTG...CCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCCAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTACAGAGGGAACTTTGTaGAAATTCTCTGGAACCAGA +
Preference number: 4 (lower is better)
Translates to: SHNLMGPKSIQNVLLALATEGTL*KFSGTR
Trigger: TCTGGTTCCAGAGAATTTGCACAAAGTTCCCTCTGT...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp GGTCTCTTCGTTCATAATAGGGAGCTACTTTCATTCCCCTTAACCCTTGTGATCTCTCTCAAGCAACATTaGAAGTCCTGTGCACTAGGG +
Preference number: 4 (lower is better)
Translates to: GLFVHNRELLSFPLTLVISLKQH*KSCALG
Trigger: CCCTAGTGCACAGGACTTGCAATGTTGCTTGAGAGA...GATCACAAGGGTTAAGGGGAATGAAAGTAGCTCCCTATTATGAACGAAGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp TCAGAAACAAGTGGCTTCCAAGATAGTACCTGTAGTAATTCTGGAGCTTGTTGGTTGGTCAAATTCTTCTaGAGTGAGGGAGACCCACCG +
Preference number: 4 (lower is better)
Translates to: SETSGFQDSTCSNSGACWLVKFF*SEGDPP
Trigger: CGGTGGGTCTCCCTCACTCCAGAAGAATTTGACCAA...CCAACAAGCTCCAGAATTACTACAGGTACTATCTTGGAAGCCACTTGTTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp TTGAAACAGAATGTATGGCAAGGTGACGTTTTCTTCCCGAAGGGTGGCTTTGCTGCTAATCGGCTCATGTaGGTCATATTGTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LKQNVWQGDVFFPKGGFAANRLM*VILFEA
Trigger: AGCCTCAAACAATATGACCCACATGAGCCGATTAGC...AGCAAAGCCACCCTTCGGGAAGAAAACGTCACCTTGCCATACATTCTGTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACTTCAAAACACGGAAGTCTaGAGTATCACGGAAAAAGTT +
Preference number: 4 (lower is better)
Translates to: KDYALRAGGRFVSVQRELQNTEV*SITEKV
Trigger: AACTTTTTCCGTGATACTCCAGACTTCCGTGTTTTG...AAGTTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp AATCAATTTCACCTGTTGATAGTGCCATGTCTCAATAGCCTCAATCTTGGGGATATGCTGTATGGGACCTaGTCCCCGTTTTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: NQFHLLIVPCLNSLNLGDMLYGT*SPFSTS
Trigger: GGAAGTGGAAAACGGGGACCAGGTCCCATACAGCAT...ATCCCCAAGATTGAGGCTATTGAGACATGGCACTATCAACAGGTGAAATTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp TCAGAAACAAGTGGCTTCCAAGATAGTACCTGTAGTAATTCTGGAGCTTGTTGGAATCTCAGAGAGGGATaGAGGCCCAATGAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SETSGFQDSTCSNSGACWNLREG*RPNEAL
Trigger: CAGAGCTTCATTGGGCCTCCATCCCTCTCTGAGATT...CCAACAAGCTCCAGAATTACTACAGGTACTATCTTGGAAGCCACTTGTTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTCTTGGAGGAATATTCTaGATATTTCTGGAGTTGGTC +
Preference number: 4 (lower is better)
Translates to: SHNLMGPKSIQNVLLALALGGIF*IFLELV
Trigger: GACCAACTCCAGAAATATTCAGAATATTCCTCCAAG...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp ATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCAGTCTCACTTGGAGGAATATTCTaGATATTTCTGGAGTTGGTC +
Preference number: 4 (lower is better)
Translates to: MRKLAGLVERKGDFPSVSLGGIF*IFLELV
Trigger: GACCAACTCCAGAAATATTCAGAATATTCCTCCAAG...TGAGACTGAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp TCAGAAACAAGTGGCTTCCAAGATAGTACCTGTAGTAATTCTGGAGCTTGTTGGGGGTGTACCCACTGTTaGAACAGAATGTATGGCAAG +
Preference number: 4 (lower is better)
Translates to: SETSGFQDSTCSNSGACWGCTHC*NRMYGK
Trigger: CTTGCCATACATTCTGTTTCAACAGTGGGTACACCC...CCAACAAGCTCCAGAATTACTACAGGTACTATCTTGGAAGCCACTTGTTTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp TTGTTGGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCTTTCATGCTTGTTTTaGGGATCCAGAATAGGAGTT +
Preference number: 4 (lower is better)
Translates to: LLALALLGVYPLLKQNVWLSCLF*GSRIGV
Trigger: AACTCCTATTCTGGATCCTCAAAACAAGCATGAAAG...CCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTATGAGACAAGATCTCTaGTATTCCTTAGGCAACATC +
Preference number: 4 (lower is better)
Translates to: SHNLMGPKSIQNVLLALAMRQDL*YSLGNI
Trigger: GATGTTGCCTAAGGAATAGCAGAGATCTTGTCTCAT...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR GCA 90 bp TTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTACAGAGGGAACTTTGTaGAAATTCTCTGGAACCAGA +
Preference number: 4 (lower is better)
Translates to: FSSRRVALLPLVREECVCTEGTL*KFSGTR
Trigger: TCTGGTTCCAGAGAATTTGCACAAAGTTCCCTCTGT...ACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp ACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTAGAAGTTGCAGTAGGTTaGTTTCTTGAAGTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: TFSSRRVALLPLVREECVEVAVG*FLEVLH
Trigger: ATGAAGCACTTCAAGAAACCAACCTACTGCAACTTC...TACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp TCAGAAACAAGTGGCTTCCAAGATAGTACCTGTAGTAATTCTGGAGCTTGTTGGCACTTGATACTTTTGTaGCACCGGTCACACTTGACG +
Preference number: 4 (lower is better)
Translates to: SETSGFQDSTCSNSGACWHLILL*HRSHLT
Trigger: CGTCAAGTGTGACCGGTGCCACAAAAGTATCAAGTG...CCAACAAGCTCCAGAATTACTACAGGTACTATCTTGGAAGCCACTTGTTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp ACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTCTGTTCTTGCTTTCTCTCTTaGTTTAGCTGGTGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: TTSWALSPFKMFCWHWLCSCFLS*FSWCLA
Trigger: TGCCAAACACCAGCTAAACCAAGAGAGAAAGCAAGA...ACAGAGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp ACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTCTGTTGGCTTTGCTTCCACTaGTTAGAGAAGAGTGTGTAT +
Preference number: 4 (lower is better)
Translates to: TTSWALSPFKMFCWHWLCWLCFH*LEKSVY
Trigger: ATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCA...ACAGAGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp TTCATTCCCCTTAACCCTTGTGATCACCACAGGGAGATGCGTCCTGACAATGAATTCTTATCTGACAAATaGGAGAGTAAATCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: FIPLNPCDHHREMRPDNEFLSDK*ESKSSP
Trigger: TGGGCTGGATTTACTCTCCCATTTGTCAGATAAGAA...TTCATTGTCAGGACGCATCTCCCTGTGGTGATCACAAGGGTTAAGGGGAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp AATCAATTTCACCTGTTGATAGTGCCATGTCTCAATAGCCTCAATCTTGGGGATAGTAGGTTGGTTTCTTaGAGTGCTTCATGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: NQFHLLIVPCLNSLNLGDSRLVS*SASWSR
Trigger: CCTGGACCATGAAGCACTTCAAGAAACCAACCTACT...ATCCCCAAGATTGAGGCTATTGAGACATGGCACTATCAACAGGTGAAATTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp TTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTCTTTTGAGTACGTTTTaGCACAACCAGGAATGTTTC +
Preference number: 4 (lower is better)
Translates to: FSSRRVALLPLVREECVCLLSTF*HNQECF
Trigger: GAAACATTCCTGGTTGTGTCAAAACGTACTCAAAAG...ACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR TCA 90 bp AATCAATTTCACCTGTTGATAGTGCCATGTCTCAATAGCCTCAATCTTGGGGATACATGCTGGGAATGTTaGGAATGGCAATGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: NQFHLLIVPCLNSLNLGDTCWEC*EWQCLP
Trigger: TGGAAGGCATTGCCATTCTCAACATTCCCAGCATGT...ATCCCCAAGATTGAGGCTATTGAGACATGGCACTATCAACAGGTGAAATTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp CCTTCACAGTTAAGTGCCATTTGTACACACAATCTTAATATTCCCTTCTTTGTCATACTCTGGGAGTGGTaGGTGCAAAGAAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PSQLSAICTHNLNIPFFVILWEW*VQRSRR
Trigger: CCTCCTGCTTCTTTGCACTCACCACTCCCAGAGTAT...GACAAAGAAGGGAATATTAAGATTGTGTGTACAAATGGCACTTAACTGTGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp GGTCTCTTCGTTCATAATAGGGAGCTACTTTCATTCCCCTTAACCCTTGTGATCCACTGGTGGATGCTTTaGAAAGTTGGCCTTATCAAT +
Preference number: 4 (lower is better)
Translates to: GLFVHNRELLSFPLTLVIHWWML*KVGLIN
Trigger: ATTGATAAGGCCAACTTTGCAAAGCATCCACCAGTG...GATCACAAGGGTTAAGGGGAATGAAAGTAGCTCCCTATTATGAACGAAGAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp CCTTCACAGTTAAGTGCCATTTGTACACACAATCTTAATATTCCCTTCTTTGTCAGCTCTGCATGGCCTTaGCCTTGGGAAAGGATGGTA +
Preference number: 4 (lower is better)
Translates to: PSQLSAICTHNLNIPFFVSSAWP*PWERMV
Trigger: TACCATCCTTTCCCAAGGGCAAGGCCATGCAGAGCT...GACAAAGAAGGGAATATTAAGATTGTGTGTACAAATGGCACTTAACTGTGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp GGTCTCTTCGTTCATAATAGGGAGCTACTTTCATTCCCCTTAACCCTTGTGATCCCTTACTTAGCATTCTaGACTGTTAGGTTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GLFVHNRELLSFPLTLVIPYLAF*TVRLSR
Trigger: TCTGCTCAACCTAACAGTGCAGAATGCTAAGTAAGG...GATCACAAGGGTTAAGGGGAATGAAAGTAGCTCCCTATTATGAACGAAGAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp GTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGTGTGTGTGTGCACTTTACAGTTTTTATTaGTGTTGGGGTAGAAGCATG +
Preference number: 4 (lower is better)
Translates to: VALLPLVREECVCVCVCALYSFY*CWGRSM
Trigger: CATGCTTCTACCCCAACAGCAATAAAAACTGTAAAG...TGCACACACACACACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CCA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTGAATATTTCTGGAGTTaGTCAAATTCTTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: SHNLMGPKSIQNVLLALAEYFWS*SNSSGV
Trigger: CACTCCAGAAGAATTTGACCAACTCCAGAAATATTC...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp TTGTTGGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGGAATATTTCTGGAGTTaGTCAAATTCTTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: LLALALLGVYPLLKQNVWEYFWS*SNSSGV
Trigger: CACTCCAGAAGAATTTGACCAACTCCAGAAATATTC...CCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp ACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTCTGTGCAATATGCAGCATTTaGTTGACAATGCAATCCATC +
Preference number: 4 (lower is better)
Translates to: TTSWALSPFKMFCWHWLCAICSI*LTMQSI
Trigger: GATGGATTGCATTGTCAACCAAATGCTGCATATTGC...ACAGAGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CCA 90 bp TTGTTGGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGTTGAAACAGAATGTATaGCAAGGTGACGTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LLALALLGVYPLLKQNVWLKQNV*QGDVFF
Trigger: GAAGAAAACGTCACCTTGCCATACATTCTGTTTCAA...CCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
3UTR CAA 72 bp ACTGAAGTTGTTATACTCCATGCCTCTAAGAAGGACTaGGGATATGTCTCTCAAGCAACATTGCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: TEVVILHASKKD*GYVSQATLQVL
Trigger: CAGGACTTGCAATGTTGCTTGAGAGACATATCCCAAGTCCTTCTTAGAGGCATGGAGTATAACAACTTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR TCA 90 bp ATCTTGGGGATCATGGCTGAAACACATGCACGAACTTCTGTAAATGTCTTAGAAGAGACCGTTCTCATCTaGATCATAGAGGCGAAACAT +
Preference number: 4 (lower is better)
Translates to: ILGIMAETHARTSVNVLEETVLI*IIEAKH
Trigger: ATGTTTCGCCTCTATGATTCAGATGAGAACGGTCTC...TTCTAAGACATTTACAGAAGTTCGTGCATGTGTTTCAGCCATGATCCCCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp ATCTTGGGGATCATGGCTGAAACACATGCACGAACTTCTGTAAATGTCTTAGAATGTATTTACAGTAAGTaGAGCACAGGCCTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: ILGIMAETHARTSVNVLECIYSK*STGLAC
Trigger: GCAAGCAAGGCCTGTGCTGCACTTACTGTAAATACA...TTCTAAGACATTTACAGAAGTTCGTGCATGTGTTTCAGCCATGATCCCCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR CAA 72 bp GTGCCATTTGTACACACAATCTTAATATTCCCTTCTTaGTCCAAAGCTCCTGTCCAATGCAAGATTAGAGGC +
Preference number: 4 (lower is better)
Translates to: VPFVHTILIFPS*SKAPVQCKIRG
Trigger: GCCTCTAATCTTGCATTGGACAGGAGCTTTGGACAAAGAAGGGAATATTAAGATTGTGTGTACAAATGGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp ATCTTGGGGATCATGGCTGAAACACATGCACGAACTTCTGTAAATGTCTTAGAACAAAAGTCTCCGAGGTaGCAAATTCAAAGTACCACA +
Preference number: 4 (lower is better)
Translates to: ILGIMAETHARTSVNVLEQKSPR*QIQSTT
Trigger: TGTGGTACTTTGAATTTGGCACCTCGGAGACTTTTG...TTCTAAGACATTTACAGAAGTTCGTGCATGTGTTTCAGCCATGATCCCCAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR GCA 90 bp AATCAATTTCACCTGTTGATAGTGCCATGTCTCAATAGCCTCAATCTTGGGGATACAGAGGGAACTTTGTaGAAATTCTCTGGAACCAGA +
Preference number: 4 (lower is better)
Translates to: NQFHLLIVPCLNSLNLGDTEGTL*KFSGTR
Trigger: TCTGGTTCCAGAGAATTTGCACAAAGTTCCCTCTGT...ATCCCCAAGATTGAGGCTATTGAGACATGGCACTATCAACAGGTGAAATTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
3UTR CAA 72 bp TGTGTGTGTGTGTGCATGTGTGAGTGTGCACATAAATaGTGTGTGAGTGTGCATTATAGTTTCTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: CVCVCMCECAHK*CVSVHYSFLLS
Trigger: AGAAAGCAAGAAACTATAATGCACACTCACACACAATTTATGTGCACACTCACACATGCACACACACACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS CCA 90 bp GGATGCAGCCCCAGTGGGTGCCGCGGAGACCAGGCTGCCAGGCTGTaGTTGGTAGCGCCGGGGTCTTCACCCTGTGCTCGGAGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: GCSPSGCRGDQAARL*LVAPGSSPCARSSA
Trigger: TGCTGAACTCCGAGCACAGGGTGAAGACCCCGGCGCTACCAACCACAGCCTGGCAGCCTGGTCTCCGCGGCACCCACTGGGGCTGCATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS GCA 90 bp CCAGGCTGCCAGGCTGTGGTTGGTAGCGCCGGGGTCTTCACCCTGTaGTCGGAGTTCAGCAGCTCCAAAGCTGTCTATCTCCGTGGCCCG +
Preference number: 5 (lower is better)
Translates to: PGCQAVVGSAGVFTL*SEFSSSKAVYLRGP
Trigger: CGGGCCACGGAGATAGACAGCTTTGGAGCTGCTGAACTCCGAGCACAGGGTGAAGACCCCGGCGCTACCAACCACAGCCTGGCAGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp CAGCATGAGGCGCTCGTTTTCTTGTGTGGGGATATCCCATCCACGCATGTGCTGCCAGGCAACACTTGGTaGCGCGGTGGCCCGGGGCGC +
Preference number: 5 (lower is better)
Translates to: QHEALVFLCGDIPSTHVLPGNTW*RGGPGR
Trigger: GCGCCCCGGGCCACCGCGCAACCAAGTGTTGCCTGG...CAGCACATGCGTGGATGGGATATCCCCACACAAGAAAACGAGCGCCTCATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS CCA 90 bp GTATCTGCGCTGTTGGCCTCACTGTTGCTGGCTCCCTCCGTCGGGTaGTCAGAGGTCTCGTGTCTGGGCTTCTGGCTGAAGGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: VSALLASLLLAPSVG*SEVSCLGFWLKARK
Trigger: CTTCCTGGCCTTCAGCCAGAAGCCCAGACACGAGACCTCTGACCACCCGACGGAGGGAGCCAGCAACAGTGAGGCCAACAGCGCAGATAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000480809.5
CDS-3UTR CAA 90 bp CCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCCTGTTGGCCTCACTGTaGCTGGCTCCCTCCGTCGGG +
Preference number: 5 (lower is better)
Translates to: PAEPCQGLCSESRRPFCLLLASL*LAPSVG
Trigger: CCCGACGGAGGGAGCCAGCAACAGTGAGGCCAACAG...GAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGGGGGTCGCAGCCACTaGGTCTTCAGCTGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: VRLLSPAKDYALRAGGRFGGRSH*VFSWCL
Trigger: CAAGCACCAGCTGAAGACCAAGTGGCTGCGACCCCC...AAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AGGCAGGAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGCAGCACAGGCCTTGCTaGCGGACGCCCATGAGCATG +
Preference number: 5 (lower is better)
Translates to: RQETCSLLLASVHEETCRQHRPC*RTPMSM
Trigger: CATGCTCATGGGCGTCCGCAAGCAAGGCCTGTGCTG...CCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTCCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS CCA 90 bp GTGTCTGGGCTTCTGGCTGAAGGCCAGGAAGAGGTGAGTGCTCAGTaGCTGGGGAAGGTCCACCTCCAGGTACGCCCTCATGAACAGCTT +
Preference number: 5 (lower is better)
Translates to: VSGLLAEGQEEVSAQ*LGKVHLQVRPHEQL
Trigger: AAGCTGTTCATGAGGGCGTACCTGGAGGTGGACCTTCCCCAGCCACTGAGCACTCACCTCTTCCTGGCCTTCAGCCAGAAGCCCAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000480809.5
CDS-3UTR CAA 90 bp CCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGCTGCCAGGCTGTGGTaGGTAGCGCCGGGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: PAKDYALRAGGRFVSVQRAARLW*VAPGSS
Trigger: TGAAGACCCCGGCGCTACCAACCACAGCCTGGCAGC...CCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp GTGAGTGCAAAGAAGCAGGAGGGAACCGTCTCCTGGTTTCCCCAGCAAAGTTCCCTGTTGGCCTCACTGTaGCTGGCTCCCTCCGTCGGG +
Preference number: 5 (lower is better)
Translates to: VSAKKQEGTVSWFPQQSSLLASL*LAPSVG
Trigger: CCCGACGGAGGGAGCCAGCAACAGTGAGGCCAACAG...GGAACTTTGCTGGGGAAACCAGGAGACGGTTCCCTCCTGCTTCTTTGCACTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp CCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGCTGGGGATTCCGAGCTaGAAGACCGAGGGACGGGGG +
Preference number: 5 (lower is better)
Translates to: PAKDYALRAGGRFVSVQRLGIPS*KTEGRG
Trigger: CCCCCGTCCCTCGGTCTTCAAGCTCGGAATCCCCAG...CCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTGCAATCCATCTCCGCTaGGTCCAGGAGACCGTTCTC +
Preference number: 5 (lower is better)
Translates to: APAEPCQGLCSESRRPFCAIHLR*VQETVL
Trigger: GAGAACGGTCTCCTGGACCAAGCGGAGATGGATTGC...ACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AGGCAGGAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGTGTCTCCCTCCACTCTaGGGGTTCACCAAGACCAGC +
Preference number: 5 (lower is better)
Translates to: RQETCSLLLASVHEETCRCLPPL*GFTKTS
Trigger: GCTGGTCTTGGTGAACCCCAAGAGTGGAGGGAGACA...CCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACTGTTGGCCTCACTGTaGCTGGCTCCCTCCGTCGGG +
Preference number: 5 (lower is better)
Translates to: AKDYALRAGGRFVSVQRELLASL*LAPSVG
Trigger: CCCGACGGAGGGAGCCAGCAACAGTGAGGCCAACAG...TTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCGGGGGTCGCAGCCACTaGGTCTTCAGCTGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: KGRPRNQRAPAEPCQGLCGGRSH*VFSWCL
Trigger: CAAGCACCAGCTGAAGACCAAGTGGCTGCGACCCCC...GCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACTGGGGATTCCGAGCTaGAAGACCGAGGGACGGGGG +
Preference number: 5 (lower is better)
Translates to: AKDYALRAGGRFVSVQRELGIPS*KTEGRG
Trigger: CCCCCGTCCCTCGGTCTTCAAGCTCGGAATCCCCAG...TTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AATTCTGCTCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAACTGGGGATTCCGAGCTaGAAGACCGAGGGACGGGGG +
Preference number: 5 (lower is better)
Translates to: NSAQGLWECGGCCLSQPQLGIPS*KTEGRG
Trigger: CCCCCGTCCCTCGGTCTTCAAGCTCGGAATCCCCAG...TTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGAATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp CCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCGCAATCCATCTCCGCTaGGTCCAGGAGACCGTTCTC +
Preference number: 5 (lower is better)
Translates to: PAEPCQGLCSESRRPFCLAIHLR*VQETVL
Trigger: GAGAACGGTCTCCTGGACCAAGCGGAGATGGATTGC...GAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAGCACAGGCCTTGCTaGCGGACGCCCATGAGCATG +
Preference number: 5 (lower is better)
Translates to: KLSLKGRPRNQRAPAEPCQHRPC*RTPMSM
Trigger: CATGCTCATGGGCGTCCGCAAGCAAGGCCTGTGCTG...GCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAAGTGCAGCACAGGCCTaGCTTGCGGACGCCCATGAG +
Preference number: 5 (lower is better)
Translates to: SLLLASVHEETCRAGRKKSAAQA*LADAHE
Trigger: CTCATGGGCGTCCGCAAGCAAGGCCTGTGCTGCACT...TTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp CCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCCCAGAGCTCCTTCCCTaGGCCACATCTGATCTCACC +
Preference number: 5 (lower is better)
Translates to: PAEPCQGLCSESRRPFCLPELLP*ATSDLT
Trigger: GGTGAGATCAGATGTGGCCAAGGGAAGGAGCTCTGG...GAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp TCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAACCTCATGGCAGCTCTGGGGGCTCTaGGAGCCGCCTCTAAGCAAA +
Preference number: 5 (lower is better)
Translates to: SRPVGMWRLLPKPATTSWQLWGL*EPPLSK
Trigger: TTTGCTTAGAGGCGGCTCCAAGAGCCCCCAGAGCTG...CCATGAGGTTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR CAA 90 bp CGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGCAGCTCTGGGGGCTCTaGGAGCCGCCTCTAAGCAAA +
Preference number: 5 (lower is better)
Translates to: RPRNQRAPAEPCQGLCSEQLWGL*EPPLSK
Trigger: TTTGCTTAGAGGCGGCTCCAAGAGCCCCCAGAGCTG...CTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR CAA 90 bp GCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTGCATGTGCTGTACGTTaGTTCCTCCCTGGCAACCTG +
Preference number: 5 (lower is better)
Translates to: APAEPCQGLCSESRRPFCACAVR*FLPGNL
Trigger: CAGGTTGCCAGGGAGGAACAAACGTACAGCACATGC...ACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS GCA 90 bp GTAGGTTATCAGGGCTTTGGGTGCACCGACTGGGAGGCATGTCTGTaGTCTGCGAGGAATTTTCTCCCGGGAGCTCCAGCAGTCAAAGGC +
Preference number: 5 (lower is better)
Translates to: VGYQGFGCTDWEACL*SARNFLPGAPAVKG
Trigger: GCCTTTGACTGCTGGAGCTCCCGGGAGAAAATTCCTCGCAGAGCACAGACATGCCTCCCAGTCGGTGCACCCAAAGCCCTGATAACCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS-3UTR CAA 90 bp TTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTCCAGGCAACACTTGGTaGCGCGGTGGCCCGGGGCGC +
Preference number: 5 (lower is better)
Translates to: FSSRRVALLPLVREECVCPGNTW*RGGPGR
Trigger: GCGCCCCGGGCCACCGCGCAACCAAGTGTTGCCTGG...ACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR CAA 90 bp CGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGCCAGGGCCTGGCTCATaGCAGGTTTGCGATGTAAGC +
Preference number: 5 (lower is better)
Translates to: RPRNQRAPAEPCQGLCSEPGPGS*QVCDVS
Trigger: GCTTACATCGCAAACCTGCAATGAGCCAGGCCCTGG...CTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GTTCACGGAGAAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGCCGCCCATCCCCCTaGGAGCCAGAGTCATCCATC +
Preference number: 5 (lower is better)
Translates to: VHGEVVTQRTTKKPTCACCRPSP*EPESSI
Trigger: GATGGATGACTCTGGCTCCAAGGGGGATGGGCGGCA...GCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTTCTCCGTGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GTTCACGGAGAAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCAGTGCAGCACAGGCCTaGCTTGCGGACGCCCATGAG +
Preference number: 5 (lower is better)
Translates to: VHGEVVTQRTTKKPTCACSAAQA*LADAHE
Trigger: CTCATGGGCGTCCGCAAGCAAGGCCTGTGCTGCACT...GCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTTCTCCGTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AATTCTGCTCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAAAGTGCAGCACAGGCCTaGCTTGCGGACGCCCATGAG +
Preference number: 5 (lower is better)
Translates to: NSAQGLWECGGCCLSQPQSAAQA*LADAHE
Trigger: CTCATGGGCGTCCGCAAGCAAGGCCTGTGCTGCACT...TTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GCTCTGGGGGCTCTTGGAGCCGCCTCTAAGCAAACATGTAGACACCAGGAGAAGATGACAAGTTCGCCCTaGGCGGACACGCAGCCATCA +
Preference number: 5 (lower is better)
Translates to: ALGALGAASKQTCRHQEKMTSSP*ADTQPS
Trigger: TGATGGCTGCGTGTCCGCCAAGGGCGAACTTGTCAT...CTTCTCCTGGTGTCTACATGTTTGCTTAGAGGCGGCTCCAAGAGCCCCCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR CAA 90 bp TCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAACCTCATGGTGTCTCCCTCCACTCTaGGGGTTCACCAAGACCAGC +
Preference number: 5 (lower is better)
Translates to: SRPVGMWRLLPKPATTSWCLPPL*GFTKTS
Trigger: GCTGGTCTTGGTGAACCCCAAGAGTGGAGGGAGACA...CCATGAGGTTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GCTCTGGGGGCTCTTGGAGCCGCCTCTAAGCAAACATGTAGACACCAGGAGAAGCCTTCCAGGAAGATGTaGCTCAGGTCCACCCCAACC +
Preference number: 5 (lower is better)
Translates to: ALGALGAASKQTCRHQEKPSRKM*LRSTPT
Trigger: GGTTGGGGTGGACCTGAGCAACATCTTCCTGGAAGG...CTTCTCCTGGTGTCTACATGTTTGCTTAGAGGCGGCTCCAAGAGCCCCCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR CAA 90 bp GCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTTCCCGAAGGGTGGCTTaGCTTCCACTGGTTAGAGAA +
Preference number: 5 (lower is better)
Translates to: APAEPCQGLCSESRRPFCSRRVA*LPLVRE
Trigger: TTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGA...ACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GCTCTGGGGGCTCTTGGAGCCGCCTCTAAGCAAACATGTAGACACCAGGAGAAGCCAGAGCTCCTTCCCTaGGCCACATCTGATCTCACC +
Preference number: 5 (lower is better)
Translates to: ALGALGAASKQTCRHQEKPELLP*ATSDLT
Trigger: GGTGAGATCAGATGTGGCCAAGGGAAGGAGCTCTGG...CTTCTCCTGGTGTCTACATGTTTGCTTAGAGGCGGCTCCAAGAGCCCCCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR CAA 90 bp TCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGAGAGCCGGAGGCCGTTTaGTCTCTGTACAGAGGGAAC +
Preference number: 5 (lower is better)
Translates to: SLKGRPRNQRAPAEPCQGEPEAV*SLYRGN
Trigger: GTTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTC...TCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS GCA 90 bp GGATCCTCCGTGCAACATGGCTGCATCCAGGGTTCTCCATCCACTTaGATTGGCAGCAGCTTGTTTGTCCTGATGGTGACAGAGGCGCAC +
Preference number: 5 (lower is better)
Translates to: GSSVQHGCIQGSPST*IGSSLFVLMVTEAH
Trigger: GTGCGCCTCTGTCACCATCAGGACAAACAAGCTGCTGCCAATGCAAGTGGATGGAGAACCCTGGATGCAGCCATGTTGCACGGAGGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447054.5
CDS CCA 90 bp CTTGCGGACGCCCATGAGCATGATATGGCAGAAGTTGCAGTAGGTTaGTTTCTTGAAGTGCTTCATGGTCCAGGCGTGCCGCCCATCCCC +
Preference number: 5 (lower is better)
Translates to: LADAHEHDMAEVAVG*FLEVLHGPGVPPIP
Trigger: GGGGATGGGCGGCACGCCTGGACCATGAAGCACTTCAAGAAACCAACCTACTGCAACTTCTGCCATATCATGCTCATGGGCGTCCGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000437018.2
ENST00000480809.5
CDS-3UTR CAA 90 bp GAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTTGGCTCATTGCAGGTTaGCGATGTAAGCCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: ETCSLLLASVHEETCRAGWLIAG*RCKPFR
Trigger: CCTGAAAGGCTTACATCGCAAACCTGCAATGAGCCA...ACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCCAGCACAGGCCTTGCTaGCGGACGCCCATGAGCATG +
Preference number: 5 (lower is better)
Translates to: SVHEETCRAGRKKGGFPFQHRPC*RTPMSM
Trigger: CATGCTCATGGGCGTCCGCAAGCAAGGCCTGTGCTG...GAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AATTCTGCTCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAATGGCACCGGTCACACTaGACGGAGGAGTTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: NSAQGLWECGGCCLSQPQWHRSH*TEEFPS
Trigger: GGAAGGGAACTCCTCCGTCAAGTGTGACCGGTGCCA...TTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR CAA 90 bp AAATTCTGCTCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACATGGCACCGGTCACACTaGACGGAGGAGTTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: KFCSRPVGMWRLLPKPATWHRSH*TEEFPS
Trigger: GGAAGGGAACTCCTCCGTCAAGTGTGACCGGTGCCA...TGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGAATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR CAA 90 bp AGGCAGGAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGACAGCCCGGTTCTTCTaGTTTTCTCCCCAGAGATTG +
Preference number: 5 (lower is better)
Translates to: RQETCSLLLASVHEETCRTARFF*FSPQRL
Trigger: CAATCTCTGGGGAGAAAACAAGAAGAACCGGGCTGT...CCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTTGCATTGGCAGCAGCTaGTTTGTCCTGATGGTGACA +
Preference number: 5 (lower is better)
Translates to: APAEPCQGLCSESRRPFCCIGSS*FVLMVT
Trigger: TGTCACCATCAGGACAAACAAGCTGCTGCCAATGCA...ACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCCAGAGCTCCTTCCCTaGGCCACATCTGATCTCACC +
Preference number: 5 (lower is better)
Translates to: KLSLKGRPRNQRAPAEPCPELLP*ATSDLT
Trigger: GGTGAGATCAGATGTGGCCAAGGGAAGGAGCTCTGG...GCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCGAGCCGGAGGCCGTTTaGTCTCTGTACAGAGGGAAC +
Preference number: 5 (lower is better)
Translates to: KLSLKGRPRNQRAPAEPCEPEAV*SLYRGN
Trigger: GTTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTC...GCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTGAATGGTCCAAGATCTaGCTCCTAGGTGGTCCTTCA +
Preference number: 5 (lower is better)
Translates to: APAEPCQGLCSESRRPFCEWSKI*LLGGPS
Trigger: TGAAGGACCACCTAGGAGCAAGATCTTGGACCATTC...ACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS GCA 90 bp AGACTCACCGTGCAACATGGCTGCATCCAGGGTTCTCCATCCACTTaGATTGGCAGCAGCTTGTTTGTCCTGATGGTGACAGAGGCGCAC +
Preference number: 5 (lower is better)
Translates to: RLTVQHGCIQGSPST*IGSSLFVLMVTEAH
Trigger: GTGCGCCTCTGTCACCATCAGGACAAACAAGCTGCTGCCAATGCAAGTGGATGGAGAACCCTGGATGCAGCCATGTTGCACGGTGAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS CCA 90 bp GAGTGGCTAAAGGGCAGTGATGGAGTTTTGTTCACTAGGCTGAAGTaGAGGCCCAGCCCAGGGCCTGGCTCATTGCAGGTTTGCGATGTA +
Preference number: 5 (lower is better)
Translates to: EWLKGSDGVLFTRLK*RPSPGPGSLQVCDV
Trigger: TACATCGCAAACCTGCAATGAGCCAGGCCCTGGGCTGGGCCTCCACTTCAGCCTAGTGAACAAAACTCCATCACTGCCCTTTAGCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000480809.5
CDS-3UTR CAA 90 bp CGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGCTCATGTGGGTCATATaGTTTGAGGCTCCCACCCTC +
Preference number: 5 (lower is better)
Translates to: RPRNQRAPAEPCQGLCSELMWVI*FEAPTL
Trigger: GAGGGTGGGAGCCTCAAACAATATGACCCACATGAG...CTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGCTTCTCAGCCATATTaGATTCAGTATCAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: VRLLSPAKDYALRAGGRFASQPY*IQYQGH
Trigger: GTGCCCCTGATACTGAATCAAATATGGCTGAGAAGC...AAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp TCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAACCTCATGGTTTTCTCCCCAGAGATaGGTGCCTCCGTACATGCTG +
Preference number: 5 (lower is better)
Translates to: SRPVGMWRLLPKPATTSWFSPQR*VPPYML
Trigger: CAGCATGTACGGAGGCACCAATCTCTGGGGAGAAAA...CCATGAGGTTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTCTGGTCACTGAGGTCTaGAACGCAGAATTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: ETCSLLLASVHEETCRAGLVTEV*NAEFQF
Trigger: GAACTGAAATTCTGCGTTCAAGACCTCAGTGACCAG...ACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp CGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGGGGTTCTCCATCCACTaGCATTGGCAGCAGCTTGTT +
Preference number: 5 (lower is better)
Translates to: RPRNQRAPAEPCQGLCSEGFSIH*HWQQLV
Trigger: AACAAGCTGCTGCCAATGCAAGTGGATGGAGAACCC...CTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS CCA 90 bp GGCCTGTCCCGGGTGATGGGGCATATGGAGGTGGGCAGTAAGATGTaGTCTCTGAGTTCCCCACCGTCACACAACGTTGATAATTCACAT +
Preference number: 5 (lower is better)
Translates to: GLSRVMGHMEVGSKM*SLSSPPSHNVDNSH
Trigger: ATGTGAATTATCAACGTTGTGTGACGGTGGGGAACTCAGAGACCACATCTTACTGCCCACCTCCATATGCCCCATCACCCGGGACAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000480809.5
CDS-3UTR CAA 90 bp AGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAATTAGTATCTGCGCTGTaGGCCTCACTGTTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: SLLLASVHEETCRAGRKKLVSAL*ASLLLA
Trigger: AGCCAGCAACAGTGAGGCCAACAGCGCAGATACTAA...TTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGTGTGTGTGTGCATGCCGCCCATCCCCCTaGGAGCCAGAGTCATCCATC +
Preference number: 5 (lower is better)
Translates to: VALLPLVREECVCVCVCACRPSP*EPESSI
Trigger: GATGGATGACTCTGGCTCCAAGGGGGATGGGCGGCA...TGCACACACACACACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTTGCCGCCCATCCCCCTaGGAGCCAGAGTCATCCATC +
Preference number: 5 (lower is better)
Translates to: SHNLMGPKSIQNVLLALACRPSP*EPESSI
Trigger: GATGGATGACTCTGGCTCCAAGGGGGATGGGCGGCA...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp CCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGTGGTCGTGGAGTTTCTaGCAGGTCGCTGCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: PAKDYALRAGGRFVSVQRWSWSF*QVAAKV
Trigger: GACTTTTGCAGCGACCTGCAAGAAACTCCACGACCA...CCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp TCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAACCTCATGGACAGCCCGGTTCTTCTaGTTTTCTCCCCAGAGATTG +
Preference number: 5 (lower is better)
Translates to: SRPVGMWRLLPKPATTSWTARFF*FSPQRL
Trigger: CAATCTCTGGGGAGAAAACAAGAAGAACCGGGCTGT...CCATGAGGTTGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAACTCCATCCACTTGCATaGGCAGCAGCTTGTTTGTCC +
Preference number: 5 (lower is better)
Translates to: SLLLASVHEETCRAGRKKLHPLA*AAACLS
Trigger: GGACAAACAAGCTGCTGCCAATGCAAGTGGATGGAG...TTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCTCCATCCACTTGCATaGGCAGCAGCTTGTTTGTCC +
Preference number: 5 (lower is better)
Translates to: KLSLKGRPRNQRAPAEPCLHPLA*AAACLS
Trigger: GGACAAACAAGCTGCTGCCAATGCAAGTGGATGGAG...GCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp CCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGTCCCGAAGGGTGGCTTaGCTTCCACTGGTTAGAGAA +
Preference number: 5 (lower is better)
Translates to: PAKDYALRAGGRFVSVQRSRRVA*LPLVRE
Trigger: TTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGA...CCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AGGCAGGAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGTGTACAGAGGGAACTTaGTGCAAATTCTCTGGAACC +
Preference number: 5 (lower is better)
Translates to: RQETCSLLLASVHEETCRCTEGT*CKFSGT
Trigger: GGTTCCAGAGAATTTGCACAAAGTTCCCTCTGTACA...CCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp CGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGGTTCACGGAGAAGTaGTCACTCAAAGGACGACCA +
Preference number: 5 (lower is better)
Translates to: RPRNQRAPAEPCQGLCSERFTEK*SLKGRP
Trigger: TGGTCGTCCTTTGAGTGACAACTTCTCCGTGAACCT...CTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GAGGCGCTCGTTTTCTTGTGTGGGGATATCCCATCCACGCATGTGCTGTACGTTAAGCTCTGCATGGCCTaGCCCTTGGGAAAGGATGGT +
Preference number: 5 (lower is better)
Translates to: EALVFLCGDIPSTHVLYVKLCMA*PLGKDG
Trigger: ACCATCCTTTCCCAAGGGCAAGGCCATGCAGAGCTT...AACGTACAGCACATGCGTGGATGGGATATCCCCACACAAGAAAACGAGCGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS GCA 90 bp CTCTCAGCCTGTGTCCCCCTTCTCTGGAAAGGTGATTATGACACCTaGCACTTAGGGCTGCTTTGCAGATTCCATGAGGCACTTAGCACC +
Preference number: 5 (lower is better)
Translates to: LSACVPLLWKGDYDT*HLGLLCRFHEALST
Trigger: GGTGCTAAGTGCCTCATGGAATCTGCAAAGCAGCCCTAAGTGGCAGGTGTCATAATCACCTTTCCAGAGAAGGGGGACACAGGCTGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS CCA 90 bp AGCTCTGTGGGATCCCACTCCAGGTACTGGGCAATATGCAGCATTTaGTTGACAATGCAATCCATCTCCGCTTGGTCCAGGAGACCGTTC +
Preference number: 5 (lower is better)
Translates to: SSVGSHSRYWAICSI*LTMQSISAWSRRPF
Trigger: GAACGGTCTCCTGGACCAAGCGGAGATGGATTGCATTGTCAACCAAATGCTGCATATTGCCCAGTACCTGGAGTGGGATCCCACAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000480809.5
CDS CCA 90 bp CAGTGGAATTTTCAAGTAGGTTATCAGGGCTTTGGGTGCACCGACTaGGAGGCATGTCTGTGCTCTGCGAGGAATTTTCTCCCGGGAGCT +
Preference number: 5 (lower is better)
Translates to: QWNFQVGYQGFGCTD*EACLCSARNFLPGA
Trigger: AGCTCCCGGGAGAAAATTCCTCGCAGAGCACAGACATGCCTCCCAGTCGGTGCACCCAAAGCCCTGATAACCTACTTGAAAATTCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS-3UTR CAA 90 bp GCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGTCCAGGGCCTGGCTCATaGCAGGTTTGCGATGTAAGC +
Preference number: 5 (lower is better)
Translates to: ALALLGVYPLLKQNVWQGPGPGS*QVCDVS
Trigger: GCTTACATCGCAAACCTGCAATGAGCCAGGCCCTGG...ACCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp TCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGCCAGGGCCTGGCTCATaGCAGGTTTGCGATGTAAGC +
Preference number: 5 (lower is better)
Translates to: SSRRVALLPLVREECVCVPGPGS*QVCDVS
Trigger: GCTTACATCGCAAACCTGCAATGAGCCAGGCCCTGG...CACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGCAGTGATGGAGTTTaGTTCACTAGGCTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: SLLLASVHEETCRAGRKKGSDGV*FTRLKW
Trigger: CCACTTCAGCCTAGTGAACAAAACTCCATCACTGCC...TTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCGGCAGTGATGGAGTTTaGTTCACTAGGCTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: KLSLKGRPRNQRAPAEPCGSDGV*FTRLKW
Trigger: CCACTTCAGCCTAGTGAACAAAACTCCATCACTGCC...GCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACTCATGTGGGTCATATaGTTTGAGGCTCCCACCCTC +
Preference number: 5 (lower is better)
Translates to: AKDYALRAGGRFVSVQRELMWVI*FEAPTL
Trigger: GAGGGTGGGAGCCTCAAACAATATGACCCACATGAG...TTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GTTCACGGAGAAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCCTCATGTGGGTCATATaGTTTGAGGCTCCCACCCTC +
Preference number: 5 (lower is better)
Translates to: VHGEVVTQRTTKKPTCACLMWVI*FEAPTL
Trigger: GAGGGTGGGAGCCTCAAACAATATGACCCACATGAG...GCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTTCTCCGTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AGGCAGGAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGGCAATATGCAGCATTaGGTTGACAATGCAATCCAT +
Preference number: 5 (lower is better)
Translates to: RQETCSLLLASVHEETCRGNMQH*VDNAIH
Trigger: ATGGATTGCATTGTCAACCAAATGCTGCATATTGCC...CCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTCCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp TCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATACATGCTGGGAATGTaGAGAATGGCAATGCCTTCC +
Preference number: 5 (lower is better)
Translates to: SLKGRPRNQRAPAEPCQGYMLGM*RMAMPS
Trigger: GGAAGGCATTGCCATTCTCAACATTCCCAGCATGTA...TCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AGGCAGGAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGACACTGTTTAGTCTTTaGAACGGCTCTTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: RQETCSLLLASVHEETCRTLFSL*NGSSFS
Trigger: TGAGAAGGAAGAGCCGTTCAAAAGACTAAACAGTGT...CCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTCCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GCGCCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTACACTGTTTAGTCTTTaGAACGGCTCTTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: APAEPCQGLCSESRRPFCTLFSL*NGSSFS
Trigger: TGAGAAGGAAGAGCCGTTCAAAAGACTAAACAGTGT...ACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AGGCAGGAAACCTGCAGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGATTCAAAATGTTTTGTaGGCACTGGCTCTGTTAGGG +
Preference number: 5 (lower is better)
Translates to: RQETCSLLLASVHEETCRIQNVL*ALALLG
Trigger: CCCTAACAGAGCCAGTGCCAACAAAACATTTTGAAT...CCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCTGCAGGTTTCCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS CCA 90 bp GCACTTACCCGGGTGATGGGGCATATGGAGGTGGGCAGTAAGATGTaGTCTCTGAGTTCCCCACCGTCACACAACGTTGATAATTCACAT +
Preference number: 5 (lower is better)
Translates to: ALTRVMGHMEVGSKM*SLSSPPSHNVDNSH
Trigger: ATGTGAATTATCAACGTTGTGTGACGGTGGGGAACTCAGAGACCACATCTTACTGCCCACCTCCATATGCCCCATCACCCGGGTAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472506.1
CDS-3UTR CAA 90 bp AATCAATTTCACCTGTTGATAGTGCCATGTCTCAATAGCCTCAATCTTGGGGATCTCACCAGGCAACACTaGGTTGCGCGGTGGCCCGGG +
Preference number: 5 (lower is better)
Translates to: NQFHLLIVPCLNSLNLGDLTRQH*VARWPG
Trigger: CCCGGGCCACCGCGCAACCAAGTGTTGCCTGGTGAG...ATCCCCAAGATTGAGGCTATTGAGACATGGCACTATCAACAGGTGAAATTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp GCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAAGGCAGTGATGGAGTTTaGTTCACTAGGCTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: AKDYALRAGGRFVSVQREGSDGV*FTRLKW
Trigger: CCACTTCAGCCTAGTGAACAAAACTCCATCACTGCC...TTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp CAGCATGAGGCGCTCGTTTTCTTGTGTGGGGATATCCCATCCACGCATGTGCTGTGTGGGTCATATTGTTaGAGGCTCCCACCCTCATTA +
Preference number: 5 (lower is better)
Translates to: QHEALVFLCGDIPSTHVLCGSYC*RLPPSL
Trigger: TAATGAGGGTGGGAGCCTCAAACAATATGACCCACA...CAGCACATGCGTGGATGGGATATCCCCACACAAGAAAACGAGCGCCTCATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp CAGCATGAGGCGCTCGTTTTCTTGTGTGGGGATATCCCATCCACGCATGTGCTGGCTTCTCAGCCATATTaGATTCAGTATCAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: QHEALVFLCGDIPSTHVLASQPY*IQYQGH
Trigger: GTGCCCCTGATACTGAATCAAATATGGCTGAGAAGC...CAGCACATGCGTGGATGGGATATCCCCACACAAGAAAACGAGCGCCTCATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp GACCCCTCTGTCCTGGCTGGCAGTATCTTGCAGAAGACGCCTCAGTCCTTCTTGGGATGCTTTGCAAAGTaGGCCTTATCAATGCAATCC +
Preference number: 5 (lower is better)
Translates to: DPSVLAGSILQKTPQSFLGCFAK*ALSMQS
Trigger: GGATTGCATTGATAAGGCCAACTTTGCAAAGCATCC...CAAGAAGGACTGAGGCGTCTTCTGCAAGATACTGCCAGCCAGGACAGAGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp CAAGCAACATTGCAAGTCCTGTGCACTAGGGTGCAGCAGGTAAGGGCCATTTTCTGGTCGTGGAGTTTCTaGCAGGTCGCTGCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: QATLQVLCTRVQQVRAIFWSWSF*QVAAKV
Trigger: GACTTTTGCAGCGACCTGCAAGAAACTCCACGACCA...GAAAATGGCCCTTACCTGCTGCACCCTAGTGCACAGGACTTGCAATGTTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp CTGCCTAAGCCAGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTCCTTCCAGGAAGATGTaGCTCAGGTCCACCCCAACC +
Preference number: 5 (lower is better)
Translates to: LPKPATTSWALSPFKMFCPSRKM*LRSTPT
Trigger: GGTTGGGGTGGACCTGAGCAACATCTTCCTGGAAGG...ACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCTGGCTTAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AAATTCTGCTCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAACAGCCCGGTTCTTCTaGTTTTCTCCCCAGAGATTG +
Preference number: 5 (lower is better)
Translates to: KFCSRPVGMWRLLPKPATTARFF*FSPQRL
Trigger: CAATCTCTGGGGAGAAAACAAGAAGAACCGGGCTGT...TGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AGCCTGCTCCTCGCGAGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAACTGGTCACTGAGGTCTaGAACGCAGAATTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: SLLLASVHEETCRAGRKKLVTEV*NAEFQF
Trigger: GAACTGAAATTCTGCGTTCAAGACCTCAGTGACCAG...TTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCTCGCGAGGAGCAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp CTGGAACCAGAGCTCCTTCCCTTGGCCACATCTGATCTCACCATAGGCAGGAAATGCATTGGCAGCAGCTaGTTTGTCCTGATGGTGACA +
Preference number: 5 (lower is better)
Translates to: LEPELLPLATSDLTIGRKCIGSS*FVLMVT
Trigger: TGTCACCATCAGGACAAACAAGCTGCTGCCAATGCA...TTTCCTGCCTATGGTGAGATCAGATGTGGCCAAGGGAAGGAGCTCTGGTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGGGGTTCTCCATCCACTaGCATTGGCAGCAGCTTGTT +
Preference number: 5 (lower is better)
Translates to: GTGSVRGVPTVETECMARGFSIH*HWQQLV
Trigger: AACAAGCTGCTGCCAATGCAAGTGGATGGAGAACCC...CCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp CCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCCATCATCATGGGCGCTaGGTTCTTGTGAGTAATTTT +
Preference number: 5 (lower is better)
Translates to: PAEPCQGLCSESRRPFCLHHHGR*VLVSNF
Trigger: AAAATTACTCACAAGAACCAAGCGCCCATGATGATG...GAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCGGGGTGTACCCACTGTaGAAACAGAATGTATGGCAA +
Preference number: 5 (lower is better)
Translates to: KLSLKGRPRNQRAPAEPCGVYPL*KQNVWQ
Trigger: TTGCCATACATTCTGTTTCAACAGTGGGTACACCCC...GCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GTTCACGGAGAAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCGTCTCTCAAGCAACATaGCAAGTCCTGTGCACTAGG +
Preference number: 5 (lower is better)
Translates to: VHGEVVTQRTTKKPTCACVSQAT*QVLCTR
Trigger: CCTAGTGCACAGGACTTGCAATGTTGCTTGAGAGAC...GCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTTCTCCGTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp CCTGCTGAGCCCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCGCAATTCCACTGAAGTaGTTATACTCCATGCCTCTA +
Preference number: 5 (lower is better)
Translates to: PAEPCQGLCSESRRPFCLAIPLK*LYSMPL
Trigger: TAGAGGCATGGAGTATAACAACTTCAGTGGAATTGC...GAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGGGCTCAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS GCA 90 bp ATTTTAATCGTGCAACATGGCTGCATCCAGGGTTCTCCATCCACTTaGATTGGCAGCAGCTTGTTTGTCCTGATGGTGACAGAGGCGCAC +
Preference number: 5 (lower is better)
Translates to: ILIVQHGCIQGSPST*IGSSLFVLMVTEAH
Trigger: GTGCGCCTCTGTCACCATCAGGACAAACAAGCTGCTGCCAATGCAAGTGGATGGAGAACCCTGGATGCAGCCATGTTGCACGATTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000490452.5
CDS GCA 90 bp GAGGCACTTAGCACCACTCCAACTCAATGTGGTCGTGGAGTTTCTTaGAGGTCGCTGCAAAAGTCTCCGAGGTGCCAAATTCAAAGTACC +
Preference number: 5 (lower is better)
Translates to: EALSTTPTQCGRGVS*RSLQKSPRCQIQST
Trigger: GGTACTTTGAATTTGGCACCTCGGAGACTTTTGCAGCGACCTGCAAGAAACTCCACGACCACATTGAGTTGGAGTGGTGCTAAGTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS-3UTR CAA 90 bp GGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGTGGCTCATTGCAGGTTaGCGATGTAAGCCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: GTGSVRGVPTVETECMARWLIAG*RCKPFR
Trigger: CCTGAAAGGCTTACATCGCAAACCTGCAATGAGCCA...CCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACTTTTAGTATCTGCGCTGTaGGCCTCACTGTTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: KDYALRAGGRFVSVQRELLVSAL*ASLLLA
Trigger: AGCCAGCAACAGTGAGGCCAACAGCGCAGATACTAA...AAGTTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp TTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTATGACAAGTTCGCCCTaGGCGGACACGCAGCCATCA +
Preference number: 5 (lower is better)
Translates to: FSSRRVALLPLVREECVCMTSSP*ADTQPS
Trigger: TGATGGCTGCGTGTCCGCCAAGGGCGAACTTGTCAT...ACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp TTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTTGTCTCCCTCCACTCTaGGGGTTCACCAAGACCAGC +
Preference number: 5 (lower is better)
Translates to: FSSRRVALLPLVREECVCCLPPL*GFTKTS
Trigger: GCTGGTCTTGGTGAACCCCAAGAGTGGAGGGAGACA...ACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGTTGGTCGTGGAGTTTCTaGCAGGTCGCTGCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: ALALLGVYPLLKQNVWQGWSWSF*QVAAKV
Trigger: GACTTTTGCAGCGACCTGCAAGAAACTCCACGACCA...ACCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp CTGGAACCAGAGCTCCTTCCCTTGGCCACATCTGATCTCACCATAGGCAGGAAATACATGCTGGGAATGTaGAGAATGGCAATGCCTTCC +
Preference number: 5 (lower is better)
Translates to: LEPELLPLATSDLTIGRKYMLGM*RMAMPS
Trigger: GGAAGGCATTGCCATTCTCAACATTCCCAGCATGTA...TTTCCTGCCTATGGTGAGATCAGATGTGGCCAAGGGAAGGAGCTCTGGTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCAAGGTTTTTCTCCCCAGAGATaGGTGCCTCCGTACATGCTG +
Preference number: 5 (lower is better)
Translates to: ALALLGVYPLLKQNVWQGFSPQR*VPPYML
Trigger: CAGCATGTACGGAGGCACCAATCTCTGGGGAGAAAA...ACCTTGCCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACTTCTCCATCCACTTGCATaGGCAGCAGCTTGTTTGTCC +
Preference number: 5 (lower is better)
Translates to: KDYALRAGGRFVSVQRELLHPLA*AAACLS
Trigger: GGACAAACAAGCTGCTGCCAATGCAAGTGGATGGAG...AAGTTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp TCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATGGTTTAGCTGGTGTTaGGCACACTGTTTAGTCTTT +
Preference number: 5 (lower is better)
Translates to: SLKGRPRNQRAPAEPCQGWFSWC*AHCLVF
Trigger: AAAGACTAAACAGTGTGCCAAACACCAGCTAAACCA...TCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp TCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGAATTCAAAATGTTTTGTaGGCACTGGCTCTGTTAGGG +
Preference number: 5 (lower is better)
Translates to: SLKGRPRNQRAPAEPCQGIQNVL*ALALLG
Trigger: CCCTAACAGAGCCAGTGCCAACAAAACATTTTGAAT...TCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCAGGTTCACGGAGAAGTaGTCACTCAAAGGACGACCA +
Preference number: 5 (lower is better)
Translates to: SVHEETCRAGRKKGGFPFRFTEK*SLKGRP
Trigger: TGGTCGTCCTTTGAGTGACAACTTCTCCGTGAACCT...GAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS TCA 90 bp GACAATGCAATCCATCTCCGCTTGGTCCAGGAGACCGTTCTCATCTaGATCATAGAGGCGAAACATGAACTCCAGCTTATCCTGAGGCCT +
Preference number: 5 (lower is better)
Translates to: DNAIHLRLVQETVLI*IIEAKHELQLILRP
Trigger: AGGCCTCAGGATAAGCTGGAGTTCATGTTTCGCCTCTATGATTCAGATGAGAACGGTCTCCTGGACCAAGCGGAGATGGATTGCATTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000480809.5
CDS CCA 90 bp TCCTTCAATATAGGCCTCAGCTCTGTGGGATCCCACTCCAGGTACTaGGCAATATGCAGCATTTGGTTGACAATGCAATCCATCTCCGCT +
Preference number: 5 (lower is better)
Translates to: SFNIGLSSVGSHSRY*AICSIWLTMQSISA
Trigger: AGCGGAGATGGATTGCATTGTCAACCAAATGCTGCATATTGCCCAGTACCTGGAGTGGGATCCCACAGAGCTGAGGCCTATATTGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000480809.5
CDS CCA 90 bp GTGGTGACTCATTCAGTGGAATTTTCAAGTAGGTTATCAGGGCTTTaGGTGCACCGACTGGGAGGCATGTCTGTGCTCTGCGAGGAATTT +
Preference number: 5 (lower is better)
Translates to: VVTHSVEFSSRLSGL*VHRLGGMSVLCEEF
Trigger: AAATTCCTCGCAGAGCACAGACATGCCTCCCAGTCGGTGCACCCAAAGCCCTGATAACCTACTTGAAAATTCCACTGAATGAGTCACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS-3UTR CAA 90 bp AGCGTCCATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCGCTTCTCAGCCATATTaGATTCAGTATCAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: SVHEETCRAGRKKGGFPFASQPY*IQYQGH
Trigger: GTGCCCCTGATACTGAATCAAATATGGCTGAGAAGC...GAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCATGGACGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp CAGCATGAGGCGCTCGTTTTCTTGTGTGGGGATATCCCATCCACGCATGTGCTGATATGCAGCATTTGGTaGACAATGCAATCCATCTCC +
Preference number: 5 (lower is better)
Translates to: QHEALVFLCGDIPSTHVLICSIW*TMQSIS
Trigger: GGAGATGGATTGCATTGTCAACCAAATGCTGCATAT...CAGCACATGCGTGGATGGGATATCCCCACACAAGAAAACGAGCGCCTCATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp AAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCGGCAATATGCAGCATTaGGTTGACAATGCAATCCAT +
Preference number: 5 (lower is better)
Translates to: KLSLKGRPRNQRAPAEPCGNMQH*VDNAIH
Trigger: ATGGATTGCATTGTCAACCAAATGCTGCATATTGCC...GCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp TCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGAGCTTTTGAGTACGTTTaGACACAACCAGGAATGTTT +
Preference number: 5 (lower is better)
Translates to: SLKGRPRNQRAPAEPCQGAFEYV*TQPGMF
Trigger: AAACATTCCTGGTTGTGTCAAAACGTACTCAAAAGC...TCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GGTCTCTTCGTTCATAATAGGGAGCTACTTTCATTCCCCTTAACCCTTGTGATCATGACAAGTTCGCCCTaGGCGGACACGCAGCCATCA +
Preference number: 5 (lower is better)
Translates to: GLFVHNRELLSFPLTLVIMTSSP*ADTQPS
Trigger: TGATGGCTGCGTGTCCGCCAAGGGCGAACTTGTCAT...GATCACAAGGGTTAAGGGGAATGAAAGTAGCTCCCTATTATGAACGAAGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp CTGGAACCAGAGCTCCTTCCCTTGGCCACATCTGATCTCACCATAGGCAGGAAAGTCCAGGTTGAAAACTaGTTTGGGGTTGAGCAGATA +
Preference number: 5 (lower is better)
Translates to: LEPELLPLATSDLTIGRKVQVEN*FGVEQI
Trigger: TATCTGCTCAACCCCAAACAAGTTTTCAACCTGGAC...TTTCCTGCCTATGGTGAGATCAGATGTGGCCAAGGGAAGGAGCTCTGGTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000382164.8
CDS-3UTR CAA 90 bp CTGGAACCAGAGCTCCTTCCCTTGGCCACATCTGATCTCACCATAGGCAGGAAATGTCTTTCAGGATTTTaGTCAAGCTGCCCCCTTCAT +
Preference number: 5 (lower is better)
Translates to: LEPELLPLATSDLTIGRKCLSGF*SSCPLH
Trigger: ATGAAGGGGGCAGCTTGACAAAAATCCTGAAAGACA...TTTCCTGCCTATGGTGAGATCAGATGTGGCCAAGGGAAGGAGCTCTGGTTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp CTGCCTAAGCCAGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTCCCGAAGGGTGGCTTaGCTTCCACTGGTTAGAGAA +
Preference number: 5 (lower is better)
Translates to: LPKPATTSWALSPFKMFCSRRVA*LPLVRE
Trigger: TTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGA...ACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCTGGCTTAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GTTCACGGAGAAGTTGTCACTCAAAGGACGACCAAGAAACCAACGTGCGCCTGCTGTACAGAGGGAACTTaGTGCAAATTCTCTGGAACC +
Preference number: 5 (lower is better)
Translates to: VHGEVVTQRTTKKPTCACCTEGT*CKFSGT
Trigger: GGTTCCAGAGAATTTGCACAAAGTTCCCTCTGTACA...GCAGGCGCACGTTGGTTTCTTGGTCGTCCTTTGAGTGACAACTTCTCCGTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp CTGCCTAAGCCAGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCTCATTGCAGGTTaGCGATGTAAGCCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: LPKPATTSWALSPFKMFCWLIAG*RCKPFR
Trigger: CCTGAAAGGCTTACATCGCAAACCTGCAATGAGCCA...ACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCTGGCTTAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp TCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGTGTGGGTCATATTGTTaGAGGCTCCCACCCTCATTA +
Preference number: 5 (lower is better)
Translates to: SSRRVALLPLVREECVCVCGSYC*RLPPSL
Trigger: TAATGAGGGTGGGAGCCTCAAACAATATGACCCACA...CACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AAGTGGACTCACTTTTCAGTGACCAGAAATGACCCTACTCTGAGATGTGTGGGTTTAGTATCTGCGCTGTaGGCCTCACTGTTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: KWTHFSVTRNDPTLRCVGLVSAL*ASLLLA
Trigger: AGCCAGCAACAGTGAGGCCAACAGCGCAGATACTAA...ACCCACACATCTCAGAGTAGGGTCATTTCTGGTCACTGAAAAGTGAGTCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp AAAGGACGACCAAGAAACCAACGTGCGCCTGCTGAGCCCTGCCAAGGATTATGCGCTTTTGAGTACGTTTaGACACAACCAGGAATGTTT +
Preference number: 5 (lower is better)
Translates to: KGRPRNQRAPAEPCQGLCAFEYV*TQPGMF
Trigger: AAACATTCCTGGTTGTGTCAAAACGTACTCAAAAGC...GCATAATCCTTGGCAGGGCTCAGCAGGCGCACGTTGGTTTCTTGGTCGTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp TTGAAACAGAATGTATGGCAAGGTGACGTTTTCTTCCCGAAGGGTGGCTTTGCTTTTTCTCCCCAGAGATaGGTGCCTCCGTACATGCTG +
Preference number: 5 (lower is better)
Translates to: LKQNVWQGDVFFPKGGFAFSPQR*VPPYML
Trigger: CAGCATGTACGGAGGCACCAATCTCTGGGGAGAAAA...AGCAAAGCCACCCTTCGGGAAGAAAACGTCACCTTGCCATACATTCTGTTTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGTGTGTGTGTGCATGCATTGGCAGCAGCTaGTTTGTCCTGATGGTGACA +
Preference number: 5 (lower is better)
Translates to: VALLPLVREECVCVCVCACIGSS*FVLMVT
Trigger: TGTCACCATCAGGACAAACAAGCTGCTGCCAATGCA...TGCACACACACACACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp TTGAAACAGAATGTATGGCAAGGTGACGTTTTCTTCCCGAAGGGTGGCTTTGCTGGGTTCTCCATCCACTaGCATTGGCAGCAGCTTGTT +
Preference number: 5 (lower is better)
Translates to: LKQNVWQGDVFFPKGGFAGFSIH*HWQQLV
Trigger: AACAAGCTGCTGCCAATGCAAGTGGATGGAGAACCC...AGCAAAGCCACCCTTCGGGAAGAAAACGTCACCTTGCCATACATTCTGTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GAGGCGCTCGTTTTCTTGTGTGGGGATATCCCATCCACGCATGTGCTGTACGTTTGGTTTAGCTGGTGTTaGGCACACTGTTTAGTCTTT +
Preference number: 5 (lower is better)
Translates to: EALVFLCGDIPSTHVLYVWFSWC*AHCLVF
Trigger: AAAGACTAAACAGTGTGCCAAACACCAGCTAAACCA...AACGTACAGCACATGCGTGGATGGGATATCCCCACACAAGAAAACGAGCGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp TCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGGGGGTGTACCCACTGTaGAAACAGAATGTATGGCAA +
Preference number: 5 (lower is better)
Translates to: SSRRVALLPLVREECVCVGVYPL*KQNVWQ
Trigger: TTGCCATACATTCTGTTTCAACAGTGGGTACACCCC...CACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AAATTCTGCTCAAGGCCTGTGGGAATGTGGAGGTTGCTGCCTAAGCCAGCCACAATTCAAAATGTTTTGTaGGCACTGGCTCTGTTAGGG +
Preference number: 5 (lower is better)
Translates to: KFCSRPVGMWRLLPKPATIQNVL*ALALLG
Trigger: CCCTAACAGAGCCAGTGCCAACAAAACATTTTGAAT...TGTGGCTGGCTTAGGCAGCAACCTCCACATTCCCACAGGCCTTGAGCAGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp CCTGCCAAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGTCCATTCAAAATGTTTaGTTGGCACTGGCTCTGTTA +
Preference number: 5 (lower is better)
Translates to: PAKDYALRAGGRFVSVQRSIQNV*LALALL
Trigger: TAACAGAGCCAGTGCCAACAAAACATTTTGAATGGA...CCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTTGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTAGGTTCACGGAGAAGTaGTCACTCAAAGGACGACCA +
Preference number: 5 (lower is better)
Translates to: SHNLMGPKSIQNVLLALARFTEK*SLKGRP
Trigger: TGGTCGTCCTTTGAGTGACAACTTCTCCGTGAACCT...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS CCA 90 bp AGCTCTGTGGGATCCCACTCCAGGTACTGGGCAATATGCAGCATTTaGTTGACAATGCAATCCATCTCAAATCAAGGCAGATTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: SSVGSHSRYWAICSI*LTMQSISNQGRFLL
Trigger: CAGGAGAAATCTGCCTTGATTTGAGATGGATTGCATTGTCAACCAAATGCTGCATATTGCCCAGTACCTGGAGTGGGATCCCACAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482566.1
CDS-3UTR CAA 90 bp TTCATTCCCCTTAACCCTTGTGATCACCACAGGGAGATGCGTCCTGACAATGAAGGTTTATTCCCTTACTaGGGAGGAAAGAGGAACCGA +
Preference number: 5 (lower is better)
Translates to: FIPLNPCDHHREMRPDNEGLFPY*GGKRNR
Trigger: TCGGTTCCTCTTTCCTCCCAAGTAAGGGAATAAACC...TTCATTGTCAGGACGCATCTCCCTGTGGTGATCACAAGGGTTAAGGGGAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp CCTTCACAGTTAAGTGCCATTTGTACACACAATCTTAATATTCCCTTCTTTGTCGGGGGTCGCAGCCACTaGGTCTTCAGCTGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: PSQLSAICTHNLNIPFFVGGRSH*VFSWCL
Trigger: CAAGCACCAGCTGAAGACCAAGTGGCTGCGACCCCC...GACAAAGAAGGGAATATTAAGATTGTGTGTACAAATGGCACTTAACTGTGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp AATGTATGGCAAGGTGACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTCACCGTCACACAACGTaGATAATTCACATTTGCGGT +
Preference number: 5 (lower is better)
Translates to: NVWQGDVFFPKGGFASTGHRHTT*IIHICG
Trigger: ACCGCAAATGTGAATTATCAACGTTGTGTGACGGTG...ACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGTCACCTTGCCATACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACTTGGATGCTTTGCAAAGTaGGCCTTATCAATGCAATCC +
Preference number: 5 (lower is better)
Translates to: KDYALRAGGRFVSVQRELGCFAK*ALSMQS
Trigger: GGATTGCATTGATAAGGCCAACTTTGCAAAGCATCC...AAGTTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp ATCTTGGGGATCATGGCTGAAACACATGCACGAACTTCTGTAAATGTCTTAGAACCTTCCAGGAAGATGTaGCTCAGGTCCACCCCAACC +
Preference number: 5 (lower is better)
Translates to: ILGIMAETHARTSVNVLEPSRKM*LRSTPT
Trigger: GGTTGGGGTGGACCTGAGCAACATCTTCCTGGAAGG...TTCTAAGACATTTACAGAAGTTCGTGCATGTGTTTCAGCCATGATCCCCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp TTGTTGGCACTGGCTCTGTTAGGGGTGTACCCACTGTTGAAACAGAATGTATGGCTGGTCACTGAGGTCTaGAACGCAGAATTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: LLALALLGVYPLLKQNVWLVTEV*NAEFQF
Trigger: GAACTGAAATTCTGCGTTCAAGACCTCAGTGACCAG...CCATACATTCTGTTTCAACAGTGGGTACACCCCTAACAGAGCCAGTGCCAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp CTGCCTAAGCCAGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTGGGGTGTACCCACTGTaGAAACAGAATGTATGGCAA +
Preference number: 5 (lower is better)
Translates to: LPKPATTSWALSPFKMFCGVYPL*KQNVWQ
Trigger: TTGCCATACATTCTGTTTCAACAGTGGGTACACCCC...ACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCTGGCTTAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AATGTATGGCAAGGTGACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTGTACAGAGGGAACTTaGTGCAAATTCTCTGGAACC +
Preference number: 5 (lower is better)
Translates to: NVWQGDVFFPKGGFASTGCTEGT*CKFSGT
Trigger: GGTTCCAGAGAATTTGCACAAAGTTCCCTCTGTACA...ACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGTCACCTTGCCATACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp ATCTTGGGGATCATGGCTGAAACACATGCACGAACTTCTGTAAATGTCTTAGAACTGGCTGGCAGTATCTaGCAGAAGACGCCTCAGTCC +
Preference number: 5 (lower is better)
Translates to: ILGIMAETHARTSVNVLELAGSI*QKTPQS
Trigger: GGACTGAGGCGTCTTCTGCAAGATACTGCCAGCCAG...TTCTAAGACATTTACAGAAGTTCGTGCATGTGTTTCAGCCATGATCCCCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS TCA 90 bp TTTCTCTCTTGGTTTAGCTGGTGTTTGGCACACTGTTTAGTCTTTTaGACGGCTCTTCCTTCTCAACGAGAAGAAGCTGCTCTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: FLSWFSWCLAHCLVF*TALPSQREEAALLG
Trigger: CCCCAGAAGAGCAGCTTCTTCTCGTTGAGAAGGAAGAGCCGTTCAAAAGACTAAACAGTGTGCCAAACACCAGCTAAACCAAGAGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp TTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTTGTGGGTCATATTGTTaGAGGCTCCCACCCTCATTA +
Preference number: 5 (lower is better)
Translates to: FSSRRVALLPLVREECVCCGSYC*RLPPSL
Trigger: TAATGAGGGTGGGAGCCTCAAACAATATGACCCACA...ACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AGAAGGTTCCTGGAAAATAACAAGTGCCCACCGACGGCGCAGAAACCCAAGAATATATGCAGCATTTGGTaGACAATGCAATCCATCTCC +
Preference number: 5 (lower is better)
Translates to: RRFLENNKCPPTAQKPKNICSIW*TMQSIS
Trigger: GGAGATGGATTGCATTGTCAACCAAATGCTGCATAT...ATTCTTGGGTTTCTGCGCCGTCGGTGGGCACTTGTTATTTTCCAGGAACCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000344484.8
CDS-3UTR CAA 90 bp AATGTATGGCAAGGTGACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTATATGCAGCATTTGGTaGACAATGCAATCCATCTCC +
Preference number: 5 (lower is better)
Translates to: NVWQGDVFFPKGGFASTGICSIW*TMQSIS
Trigger: GGAGATGGATTGCATTGTCAACCAAATGCTGCATAT...ACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAACGTCACCTTGCCATACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp TTCATTCCCCTTAACCCTTGTGATCACCACAGGGAGATGCGTCCTGACAATGAAGTCCAGGTTGAAAACTaGTTTGGGGTTGAGCAGATA +
Preference number: 5 (lower is better)
Translates to: FIPLNPCDHHREMRPDNEVQVEN*FGVEQI
Trigger: TATCTGCTCAACCCCAAACAAGTTTTCAACCTGGAC...TTCATTGTCAGGACGCATCTCCCTGTGGTGATCACAAGGGTTAAGGGGAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp ATCTTGGGGATCATGGCTGAAACACATGCACGAACTTCTGTAAATGTCTTAGAAGAGGCGCTCGTTTTCTaGTGTGGGGATATCCCATCC +
Preference number: 5 (lower is better)
Translates to: ILGIMAETHARTSVNVLEEALVF*CGDIPS
Trigger: GGATGGGATATCCCCACACAAGAAAACGAGCGCCTC...TTCTAAGACATTTACAGAAGTTCGTGCATGTGTTTCAGCCATGATCCCCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp ATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCAGTCTCATCAATAGCCTCAATCTaGGGGATCATGGCTGAAACA +
Preference number: 5 (lower is better)
Translates to: MRKLAGLVERKGDFPSVSSIASI*GIMAET
Trigger: TGTTTCAGCCATGATCCCCAAGATTGAGGCTATTGA...TGAGACTGAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp TTGAAACAGAATGTATGGCAAGGTGACGTTTTCTTCCCGAAGGGTGGCTTTGCTGCCTCTAAGAAGGACTaGGGATATGTCTCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: LKQNVWQGDVFFPKGGFAASKKD*GYVSQA
Trigger: TGCTTGAGAGACATATCCCAAGTCCTTCTTAGAGGC...AGCAAAGCCACCCTTCGGGAAGAAAACGTCACCTTGCCATACATTCTGTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp GTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTGTGTGTGTGTGTGCAGGCAATATGCAGCATTaGGTTGACAATGCAATCCAT +
Preference number: 5 (lower is better)
Translates to: VALLPLVREECVCVCVCAGNMQH*VDNAIH
Trigger: ATGGATTGCATTGTCAACCAAATGCTGCATATTGCC...TGCACACACACACACACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp TTGAAACAGAATGTATGGCAAGGTGACGTTTTCTTCCCGAAGGGTGGCTTTGCTCACCGTCACACAACGTaGATAATTCACATTTGCGGT +
Preference number: 5 (lower is better)
Translates to: LKQNVWQGDVFFPKGGFAHRHTT*IIHICG
Trigger: ACCGCAAATGTGAATTATCAACGTTGTGTGACGGTG...AGCAAAGCCACCCTTCGGGAAGAAAACGTCACCTTGCCATACATTCTGTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp TTTTCTTCCCGAAGGGTGGCTTTGCTTCCACTGGTTAGAGAAGAGTGTGTATGTCACCGTCACACAACGTaGATAATTCACATTTGCGGT +
Preference number: 5 (lower is better)
Translates to: FSSRRVALLPLVREECVCHRHTT*IIHICG
Trigger: ACCGCAAATGTGAATTATCAACGTTGTGTGACGGTG...ACATACACACTCTTCTCTAACCAGTGGAAGCAAAGCCACCCTTCGGGAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp ACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTCTGTGGATGCTTTGCAAAGTaGGCCTTATCAATGCAATCC +
Preference number: 5 (lower is better)
Translates to: TTSWALSPFKMFCWHWLCGCFAK*ALSMQS
Trigger: GGATTGCATTGATAAGGCCAACTTTGCAAAGCATCC...ACAGAGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp TTGAAACAGAATGTATGGCAAGGTGACGTTTTCTTCCCGAAGGGTGGCTTTGCTTGTCTTTCAGGATTTTaGTCAAGCTGCCCCCTTCAT +
Preference number: 5 (lower is better)
Translates to: LKQNVWQGDVFFPKGGFACLSGF*SSCPLH
Trigger: ATGAAGGGGGCAGCTTGACAAAAATCCTGAAAGACA...AGCAAAGCCACCCTTCGGGAAGAAAACGTCACCTTGCCATACATTCTGTTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp CTGCCTAAGCCAGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTCATCATCATGGGCGCTaGGTTCTTGTGAGTAATTTT +
Preference number: 5 (lower is better)
Translates to: LPKPATTSWALSPFKMFCHHHGR*VLVSNF
Trigger: AAAATTACTCACAAGAACCAAGCGCCCATGATGATG...ACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCTGGCTTAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AGCCACAACCTCATGGGCCCTAAGTCCATTCAAAATGTTTTGTTGGCACTGGCTACACTGTTTAGTCTTTaGAACGGCTCTTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: SHNLMGPKSIQNVLLALATLFSL*NGSSFS
Trigger: TGAGAAGGAAGAGCCGTTCAAAAGACTAAACAGTGT...AGCCAGTGCCAACAAAACATTTTGAATGGACTTAGGGCCCATGAGGTTGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp ATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCAGTCTCATGGTTTAGCTGGTGTTaGGCACACTGTTTAGTCTTT +
Preference number: 5 (lower is better)
Translates to: MRKLAGLVERKGDFPSVSWFSWC*AHCLVF
Trigger: AAAGACTAAACAGTGTGCCAAACACCAGCTAAACCA...TGAGACTGAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp AAGGATTATGCTCTGAGAGCCGGAGGCCGTTTTGTCTCTGTACAGAGGGAACTTTCCATTCAAAATGTTTaGTTGGCACTGGCTCTGTTA +
Preference number: 5 (lower is better)
Translates to: KDYALRAGGRFVSVQRELSIQNV*LALALL
Trigger: TAACAGAGCCAGTGCCAACAAAACATTTTGAATGGA...AAGTTCCCTCTGTACAGAGACAAAACGGCCTCCGGCTCTCAGAGCATAATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS GCA 90 bp TATACAGCAGCAGCAGGCACCTCTCAGAAGATGAGACAAGATCTCTaGTATTCCTTAGGCAACATCCTCCTGTCTGTATTCAAGGTAAAT +
Preference number: 5 (lower is better)
Translates to: YTAAAGTSQKMRQDL*YSLGNILLSVFKVN
Trigger: ATTTACCTTGAATACAGACAGGAGGATGTTGCCTAAGGAATAGCAGAGATCTTGTCTCATCTTCTGAGAGGTGCCTGCTGCTGCTGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000480809.5
CDS GCA 90 bp AGGCCACCTGCTCTTTATTCTCAAGAATGGGACATCAAAATCTCATaGATTCTTCAGGGACAAGTCAACACCTTCCAAGGTTTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: RPPALYSQEWDIKIS*ILQGQVNTFQGFFP
Trigger: TGGGAAGAAACCTTGGAAGGTGTTGACTTGTCCCTGAAGAATGCATGAGATTTTGATGTCCCATTCTTGAGAATAAAGAGCAGGTGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482566.1
CDS CCA 90 bp GCATTCTTCAGGGACAAGTCAACACCTTCCAAGGTTTCTTCCCACTaGCCTAACTCTCATGTGTGGGATATTACAAAGTGCAACATCTTT +
Preference number: 5 (lower is better)
Translates to: AFFRDKSTPSKVSSH*PNSHVWDITKCNIF
Trigger: AAAGATGTTGCACTTTGTAATATCCCACACATGAGAGTTAGGCCAGTGGGAAGAAACCTTGGAAGGTGTTGACTTGTCCCTGAAGAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482566.1
CDS-3UTR CAA 90 bp ATGAGGAAACTTGCAGGGCTGGTAGAAAGAAAGGGGGATTTCCCTTCAGTCTCAGCTTTTGAGTACGTTTaGACACAACCAGGAATGTTT +
Preference number: 5 (lower is better)
Translates to: MRKLAGLVERKGDFPSVSAFEYV*TQPGMF
Trigger: AAACATTCCTGGTTGTGTCAAAACGTACTCAAAAGC...TGAGACTGAAGGGAAATCCCCCTTTCTTTCTACCAGCCCTGCAAGTTTCCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS-3UTR CAA 90 bp GGTCTCTTCGTTCATAATAGGGAGCTACTTTCATTCCCCTTAACCCTTGTGATCTGTCTTTCAGGATTTTaGTCAAGCTGCCCCCTTCAT +
Preference number: 5 (lower is better)
Translates to: GLFVHNRELLSFPLTLVICLSGF*SSCPLH
Trigger: ATGAAGGGGGCAGCTTGACAAAAATCCTGAAAGACA...GATCACAAGGGTTAAGGGGAATGAAAGTAGCTCCCTATTATGAACGAAGAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp AATCAATTTCACCTGTTGATAGTGCCATGTCTCAATAGCCTCAATCTTGGGGATTACATGCTGGGAATGTaGAGAATGGCAATGCCTTCC +
Preference number: 5 (lower is better)
Translates to: NQFHLLIVPCLNSLNLGDYMLGM*RMAMPS
Trigger: GGAAGGCATTGCCATTCTCAACATTCCCAGCATGTA...ATCCCCAAGATTGAGGCTATTGAGACATGGCACTATCAACAGGTGAAATTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp TTGAAACAGAATGTATGGCAAGGTGACGTTTTCTTCCCGAAGGGTGGCTTTGCTTCTTTCATGCTTGTTTaGAGGATCCAGAATAGGAGT +
Preference number: 5 (lower is better)
Translates to: LKQNVWQGDVFFPKGGFASFMLV*RIQNRS
Trigger: ACTCCTATTCTGGATCCTCAAAACAAGCATGAAAGA...AGCAAAGCCACCCTTCGGGAAGAAAACGTCACCTTGCCATACATTCTGTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp AAAGATATTCTTCAGGTGGCCTGGTTTTCCCCTTACTTAGCATTCTGCACTGTTCATCATCATGGGCGCTaGGTTCTTGTGAGTAATTTT +
Preference number: 5 (lower is better)
Translates to: KDILQVAWFSPYLAFCTVHHHGR*VLVSNF
Trigger: AAAATTACTCACAAGAACCAAGCGCCCATGATGATG...AACAGTGCAGAATGCTAAGTAAGGGGAAAACCAGGCCACCTGAAGAATATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS-3UTR CAA 90 bp TCTGTAAATGTCTTAGAATCAGTGACCCCAAACCTGAACCTGCCTCAGTTTCAGTTAATATTCCCTTCTTaGTCCAAAGCTCCTGTCCAA +
Preference number: 5 (lower is better)
Translates to: SVNVLESVTPNLNLPQFQLIFPS*SKAPVQ
Trigger: TTGGACAGGAGCTTTGGACAAAGAAGGGAATATTAA...CTGAAACTGAGGCAGGTTCAGGTTTGGGGTCACTGATTCTAAGACATTTACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS CCA 90 bp TTTGATAACCTTTATAGAAGATGCTACCTTTTCTCAGCAGGTTCATaGAAACCTTCCTTTAGTAGAAGACAATTTGATGTTCTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: FDNLYRRCYLFSAGS*KPSFSRRQFDVLEG
Trigger: GCCCTCCAGAACATCAAATTGTCTTCTACTAAAGGAAGGTTTCCATGAACCTGCTGAGAAAAGGTAGCATCTTCTATAAAGGTTATCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS-3UTR CAA 90 bp CCTTCACAGTTAAGTGCCATTTGTACACACAATCTTAATATTCCCTTCTTTGTCTCCATTCAAAATGTTTaGTTGGCACTGGCTCTGTTA +
Preference number: 5 (lower is better)
Translates to: PSQLSAICTHNLNIPFFVSIQNV*LALALL
Trigger: TAACAGAGCCAGTGCCAACAAAACATTTTGAATGGA...GACAAAGAAGGGAATATTAAGATTGTGTGTACAAATGGCACTTAACTGTGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS GCA 90 bp ATGAGAAACTTCACATATCTTTACTATTCCTTCAGCAGTGTCTCCTaGATGTTTTTGGCCTTTGTTAATATAATCTCAGGTTTGGGATAC +
Preference number: 5 (lower is better)
Translates to: MRNFTYLYYSFSSVS*MFLAFVNIISGLGY
Trigger: GTATCCCAAACCTGAGATTATATTAACAAAGGCCAAAAACATGCAGGAGACACTGCTGAAGGAATAGTAAAGATATGTGAAGTTTCTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS GCA 72 bp GGGATGCAGCCCCAGTGGGTGCCGCGGAGACCAGGCTaGCAGGCTGTGGTTGGTAGCGCCGGGGTCTTCACC +
Preference number: 6 (lower is better)
Translates to: GMQPQWVPRRPG*QAVVGSAGVFT
Trigger: GGTGAAGACCCCGGCGCTACCAACCACAGCCTGGCAGCCTGGTCTCCGCGGCACCCACTGGGGCTGCATCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS CCA 72 bp CCCAGTGGGTGCCGCGGAGACCAGGCTGCCAGGCTGTaGTTGGTAGCGCCGGGGTCTTCACCCTGTGCTCGG +
Preference number: 6 (lower is better)
Translates to: PSGCRGDQAARL*LVAPGSSPCAR
Trigger: CCGAGCACAGGGTGAAGACCCCGGCGCTACCAACCACAGCCTGGCAGCCTGGTCTCCGCGGCACCCACTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS CCA 72 bp GAACCGAGAGACAGAAGGGGGACCGAAGCTGGCCTCTaGGCGTCTTCCCGCCTGCGCAGCCCTCTCGGGGGA +
Preference number: 6 (lower is better)
Translates to: EPRDRRGTEAGL*ASSRLRSPLGG
Trigger: TCCCCCGAGAGGGCTGCGCAGGCGGGAAGACGCCCAGAGGCCAGCTTCGGTCCCCCTTCTGTCTCTCGGTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS CCA 72 bp TGGCTCTTCCTCACCAGGCAACACTTGGTTGCGCGGTaGCCCGGGGCGCTCCTTCTTCGCGGTTTATTCCCT +
Preference number: 6 (lower is better)
Translates to: WLFLTRQHLVAR*PGALLLRGLFP
Trigger: AGGGAATAAACCGCGAAGAAGGAGCGCCCCGGGCCACCGCGCAACCAAGTGTTGCCTGGTGAGGAAGAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265022.8
ENST00000480809.5
CDS CCA 72 bp CTGTTGGCCTCACTGTTGCTGGCTCCCTCCGTCGGGTaGTCAGAGGTCTCGTGTCTGGGCTTCTGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: LLASLLLAPSVG*SEVSCLGFWLK
Trigger: CTTCAGCCAGAAGCCCAGACACGAGACCTCTGACCACCCGACGGAGGGAGCCAGCAACAGTGAGGCCAACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000480809.5
CDS GCA 72 bp CAGGGCTTTGGGTGCACCGACTGGGAGGCATGTCTGTaGTCTGCGAGGAATTTTCTCCCGGGAGCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: QGFGCTDWEACL*SARNFLPGAPA
Trigger: TGCTGGAGCTCCCGGGAGAAAATTCCTCGCAGAGCACAGACATGCCTCCCAGTCGGTGCACCCAAAGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS GCA 72 bp CAGGCTGTGGTTGGTAGCGCCGGGGTCTTCACCCTGTaGTCGGAGTTCAGCAGCTCCAAAGCTGTCTATCTC +
Preference number: 6 (lower is better)
Translates to: QAVVGSAGVFTL*SEFSSSKAVYL
Trigger: GAGATAGACAGCTTTGGAGCTGCTGAACTCCGAGCACAGGGTGAAGACCCCGGCGCTACCAACCACAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265022.8
CDS CCA 72 bp GGAGCCAGAGTCATCCATCCCCAGGAGGACCAGCAATaGGATGGTGGTCATCCCTCCATGGACCCATTCCTG +
Preference number: 6 (lower is better)
Translates to: GARVIHPQEDQQ*DGGHPSMDPFL
Trigger: CAGGAATGGGTCCATGGAGGGATGACCACCATCCCATTGCTGGTCCTCCTGGGGATGGATGACTCTGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000480809.5
CDS CCA 72 bp AGGAGGACCAGCAATGGGATGGTGGTCATCCCTCCATaGACCCATTCCTGTAGAGACACAAAGCCGTCCCGG +
Preference number: 6 (lower is better)
Translates to: RRTSNGMVVIPP*THSCRDTKPSR
Trigger: CCGGGACGGCTTTGTGTCTCTACAGGAATGGGTCCATGGAGGGATGACCACCATCCCATTGCTGGTCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000480809.5
ENST00000482566.1
CDS CCA 72 bp GAGAGGCCTCCCCAGAAACCAGCCCTTCCGGCACCTTaGTCTTGTGTTGTCAGCCTCCAGAACTGTGAGAAA +
Preference number: 6 (lower is better)
Translates to: ERPPQKPALPAP*SCVVSLQNCEK
Trigger: TTTCTCACAGTTCTGGAGGCTGACAACACAAGACCAAGGTGCCGGAAGGGCTGGTTTCTGGGGAGGCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS CCA 72 bp ACTTACAGAGTCATCCATCCCCAGGAGGACCAGCAATaGGATGGTGGTCATCCCTCCATGGACCCATTCCTG +
Preference number: 6 (lower is better)
Translates to: TYRVIHPQEDQQ*DGGHPSMDPFL
Trigger: CAGGAATGGGTCCATGGAGGGATGACCACCATCCCATTGCTGGTCCTCCTGGGGATGGATGACTCTGTAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482566.1
CDS CAA 72 bp GTGGGGATGATCTTATACTGCATGACAAGTTCGCCCTaGGCGGACACGCAGCCATCAGACTTCTCACCTGGC +
Preference number: 6 (lower is better)
Translates to: VGMILYCMTSSP*ADTQPSDFSPG
Trigger: GCCAGGTGAGAAGTCTGATGGCTGCGTGTCCGCCAAGGGCGAACTTGTCATGCAGTATAAGATCATCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000480809.5
CDS CAA 90 bp TCAGTGACACCCTTCCTGCTTTCCCGGATCACAGCCCGGTTCTTCTaGTTTTCTCCCCAGAGATTGGTGCCTCCGTACATGCTGGGAATG +
Preference number: 6 (lower is better)
Translates to: SVTPFLLSRITARFF*FSPQRLVPPYMLGM
Trigger: CATTCCCAGCATGTACGGAGGCACCAATCTCTGGGGAGAAAACAAGAAGAACCGGGCTGTGATCCGGGAAAGCAGGAAGGGTGTCACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000480809.5
ENST00000490452.5
CDS GCA 72 bp CAGTGGAATTTTCAAGTAGGTTATCAGGGCTTTGGGTaGACCGACTGGGAGGCATGTCTGTGCTCTGCGAGG +
Preference number: 6 (lower is better)
Translates to: QWNFQVGYQGFG*TDWEACLCSAR
Trigger: CCTCGCAGAGCACAGACATGCCTCCCAGTCGGTGCACCCAAAGCCCTGATAACCTACTTGAAAATTCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS CAA 72 bp CTTGGGATCCATCTCTCAGCTCGAGGCCAGTTTCTCTaGCATGGAGGGTTACTGTGTGTGTCTCAGCTCAGG +
Preference number: 6 (lower is better)
Translates to: LGIHLSARGQFL*HGGLLCVSQLR
Trigger: CCTGAGCTGAGACACACACAGTAACCCTCCATGCAAGAGAAACTGGCCTCGAGCTGAGAGATGGATCCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482566.1
CDS CAA 90 bp CAGCTCTGTGGGATCCCACTCCAGGTACTGGGCAATATGCAGCATTaGGTTGACAATGCAATCCATCTCCGCTTGGTCCAGGAGACCGTT +
Preference number: 6 (lower is better)
Translates to: QLCGIPLQVLGNMQH*VDNAIHLRLVQETV
Trigger: AACGGTCTCCTGGACCAAGCGGAGATGGATTGCATTGTCAACCAAATGCTGCATATTGCCCAGTACCTGGAGTGGGATCCCACAGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000480809.5
CDS TCA 72 bp GAGGGTATTACGCATGTAGTATCCCAGCAGAGGCCCTaGAAACCAGGACGACGATTGCTCTTCACCACGAGA +
Preference number: 6 (lower is better)
Translates to: EGITHVVSQQRP*KPGRRLLFTTR
Trigger: TCTCGTGGTGAAGAGCAATCGTCGTCCTGGTTTTCAGGGCCTCTGCTGGGATACTACATGCGTAATACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS GCA 72 bp GTGCAACATGGCTGCATCCAGGGTTCTCCATCCACTTaGATTGGCAGCAGCTTGTTTGTCCTGATGGTGACA +
Preference number: 6 (lower is better)
Translates to: VQHGCIQGSPST*IGSSLFVLMVT
Trigger: TGTCACCATCAGGACAAACAAGCTGCTGCCAATGCAAGTGGATGGAGAACCCTGGATGCAGCCATGTTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000447054.5
ENST00000480809.5
ENST00000490452.5
CDS CCA 72 bp GGATCCCACTCCAGGTACTGGGCAATATGCAGCATTTaGTTGACAATGCAATCCATCTCCGCTTGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: GSHSRYWAICSI*LTMQSISAWSR
Trigger: CCTGGACCAAGCGGAGATGGATTGCATTGTCAACCAAATGCTGCATATTGCCCAGTACCTGGAGTGGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000480809.5
CDS CAA 72 bp GGGATCCCACTCCAGGTACTGGGCAATATGCAGCATTaGGTTGACAATGCAATCCATCTCCGCTTGGTCCAG +
Preference number: 6 (lower is better)
Translates to: GIPLQVLGNMQH*VDNAIHLRLVQ
Trigger: CTGGACCAAGCGGAGATGGATTGCATTGTCAACCAAATGCTGCATATTGCCCAGTACCTGGAGTGGGATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000480809.5
CDS CAA 90 bp TTGTTTTCTCCCCAGAGATTGGTGCCTCCGTACATGCTGGGAATGTaGAGAATGGCAATGCCTTCCAGGAAGATGTTGCTCAGGTCCACC +
Preference number: 6 (lower is better)
Translates to: LFSPQRLVPPYMLGM*RMAMPSRKMLLRST
Trigger: GGTGGACCTGAGCAACATCTTCCTGGAAGGCATTGCCATTCTCAACATTCCCAGCATGTACGGAGGCACCAATCTCTGGGGAGAAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000480809.5
ENST00000490452.5
CDS TCA 72 bp TGGGGCATATGGAGGTGGGCAGTAAGATGTGGTCTCTaGGTTCCCCACCGTCACACAACGTTGATAATTCAC +
Preference number: 6 (lower is better)
Translates to: WGIWRWAVRCGL*VPHRHTTLIIH
Trigger: GTGAATTATCAACGTTGTGTGACGGTGGGGAACTCAGAGACCACATCTTACTGCCCACCTCCATATGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000437018.2
ENST00000472506.1
ENST00000480809.5
CDS CCA 72 bp CATTCAGTGGAATTTTCAAGTAGGTTATCAGGGCTTTaGGTGCACCGACTGGGAGGCATGTCTGTGCTCTGC +
Preference number: 6 (lower is better)
Translates to: HSVEFSSRLSGL*VHRLGGMSVLC
Trigger: GCAGAGCACAGACATGCCTCCCAGTCGGTGCACCCAAAGCCCTGATAACCTACTTGAAAATTCCACTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS CCA 72 bp AAAAGCCATGTGAGGATACAACAAGAAGGCAGCCGTTaGAAGTTAGGAAGAGAGGCCTCCCCAGAAACCAGC +
Preference number: 6 (lower is better)
Translates to: KSHVRIQQEGSR*KLGREASPETS
Trigger: GCTGGTTTCTGGGGAGGCCTCTCTTCCTAACTTCCAACGGCTGCCTTCTTGTTGTATCCTCACATGGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS CAA 72 bp GTGGACAGTGTATTTACAGTAAGTGCAGCACAGGCCTaGCTTGCGGACGCCCATGAGCATGATATGGCAGAA +
Preference number: 6 (lower is better)
Translates to: VDSVFTVSAAQA*LADAHEHDMAE
Trigger: TTCTGCCATATCATGCTCATGGGCGTCCGCAAGCAAGGCCTGTGCTGCACTTACTGTAAATACACTGTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000437018.2
ENST00000472506.1
ENST00000480809.5
CDS CAA 90 bp GCGTGCTGCATCACCTCACCACTCCTTTTGGCTTTTGAGTACGTTTaGACACAACCAGGAATGTTTCTGGACACACAGCGTTCGTGGACA +
Preference number: 6 (lower is better)
Translates to: ACCITSPLLLAFEYV*TQPGMFLDTQRSWT
Trigger: TGTCCACGAACGCTGTGTGTCCAGAAACATTCCTGGTTGTGTCAAAACGTACTCAAAAGCCAAAAGGAGTGGTGAGGTGATGCAGCACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000437018.2
CDS TCA 72 bp AAATTAGCTCTGCTTCATCCAATAGGGGGCGTGAGATaGGAGTTGAAGCCAAGACAGCTTCGGAGAGGCAGA +
Preference number: 6 (lower is better)
Translates to: KLALLHPIGGVR*ELKPRQLRRGR
Trigger: TCTGCCTCTCCGAAGCTGTCTTGGCTTCAACTCTCATCTCACGCCCCCTATTGGATGAAGCAGAGCTAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480933.1
CDS GCA 72 bp TATCCCAGCAGAGGCCCTGAAAACCAGGACGACGATTaGTCTTCACCACGAGATTCTAGCTGCATTTCTAAC +
Preference number: 6 (lower is better)
Translates to: YPSRGPENQDDD*SSPRDSSCISN
Trigger: GTTAGAAATGCAGCTAGAATCTCGTGGTGAAGAGCAATCGTCGTCCTGGTTTTCAGGGCCTCTGCTGGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS CCA 72 bp CACACCAATGGAGAAATAGTTGTTCATGATGCTGTATaGGACCTGGTCCCCGTTTTCCACTTCCTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: HTNGEIVVHDAV*DLVPVFHFLSG
Trigger: CCCAGAGAGGAAGTGGAAAACGGGGACCAGGTCCCATACAGCATCATGAACAACTATTTCTCCATTGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000480809.5
CDS CCA 72 bp CACTTCTTATCACTCATCCCCACAGCTGTAGCAACTTaGGATCCATCTCTCAGCTCGAGGCCAGTTTCTCTT +
Preference number: 6 (lower is better)
Translates to: HFLSLIPTAVAT*DPSLSSRPVSL
Trigger: AAGAGAAACTGGCCTCGAGCTGAGAGATGGATCCCAAGTTGCTACAGCTGTGGGGATGAGTGATAAGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482566.1
CDS CAA 72 bp TCACTTCTTATCACTCATCCCCACAGCTGTAGCAACTaGGGATCCATCTCTCAGCTCGAGGCCAGTTTCTCT +
Preference number: 6 (lower is better)
Translates to: SLLITHPHSCSN*GSISQLEASFS
Trigger: AGAGAAACTGGCCTCGAGCTGAGAGATGGATCCCAAGTTGCTACAGCTGTGGGGATGAGTGATAAGAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482566.1
CDS CAA 72 bp TTCCTGAATGGCAAGAGATCTCTGAACTCCAGCTTGTaGACTTACAGAGTCATCCATCCCCAGGAGGACCAG +
Preference number: 6 (lower is better)
Translates to: FLNGKRSLNSSL*TYRVIHPQEDQ
Trigger: CTGGTCCTCCTGGGGATGGATGACTCTGTAAGTCAACAAGCTGGAGTTCAGAGATCTCTTGCCATTCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482566.1
CDS CCA 72 bp CTTTGGGGCTGGTCATGGCACGTCTGTTGGGCAGTCTaGAGCAGAAGCCAAAGTGATATGTTGATATTAACA +
Preference number: 6 (lower is better)
Translates to: LWGWSWHVCWAV*SRSQSDMLILT
Trigger: TGTTAATATCAACATATCACTTTGGCTTCTGCTCCAGACTGCCCAACAGACGTGCCATGACCAGCCCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482566.1
CDS CAA 72 bp GGGATCCCACTCCAGGTACTGGGCAATATGCAGCATTaGGTTGACAATGCAATCCATCTCAAATCAAGGCAG +
Preference number: 6 (lower is better)
Translates to: GIPLQVLGNMQH*VDNAIHLKSRQ
Trigger: CTGCCTTGATTTGAGATGGATTGCATTGTCAACCAAATGCTGCATATTGCCCAGTACCTGGAGTGGGATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482566.1
CDS CAA 90 bp CAGCTCTGTGGGATCCCACTCCAGGTACTGGGCAATATGCAGCATTaGGTTGACAATGCAATCCATCTCAAATCAAGGCAGATTTCTCCT +
Preference number: 6 (lower is better)
Translates to: QLCGIPLQVLGNMQH*VDNAIHLKSRQISP
Trigger: AGGAGAAATCTGCCTTGATTTGAGATGGATTGCATTGTCAACCAAATGCTGCATATTGCCCAGTACCTGGAGTGGGATCCCACAGAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482566.1
CDS TCA 72 bp CTCCTCGAAGTTGGTTCTATGTCTCATTCAATTTTGTaGCCGGCGCTTCACAGTGTCTGGCATATAGCAGGT +
Preference number: 6 (lower is better)
Translates to: LLEVGSMSHSIL*PALHSVWHIAG
Trigger: ACCTGCTATATGCCAGACACTGTGAAGCGCCGGTCACAAAATTGAATGAGACATAGAACCAACTTCGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS GCA 72 bp TTTCCTGTTCCAAGAGGCAGGACAGCCACTGGTGGATaGTTTGCAAAGTTGGCCTTATCAATGCAATCCAAA +
Preference number: 6 (lower is better)
Translates to: FPVPRGRTATGG*FAKLALSMQSK
Trigger: TTTGGATTGCATTGATAAGGCCAACTTTGCAAAGCATCCACCAGTGGCTGTCCTGCCTCTTGGAACAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000480809.5
CDS TCA 72 bp TGGTTTAGCTGGTGTTTGGCACACTGTTTAGTCTTTTaGACGGCTCTTCCTTCTCAACGAGAAGAAGCTGCT +
Preference number: 6 (lower is better)
Translates to: WFSWCLAHCLVF*TALPSQREEAA
Trigger: AGCAGCTTCTTCTCGTTGAGAAGGAAGAGCCGTTCAAAAGACTAAACAGTGTGCCAAACACCAGCTAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
CDS CAA 72 bp ATCACCTCACCACTCCTTTTGGCTTTTGAGTACGTTTaGACACAACCAGGAATGTTTCTGGACACACAGCGT +
Preference number: 6 (lower is better)
Translates to: ITSPLLLAFEYV*TQPGMFLDTQR
Trigger: ACGCTGTGTGTCCAGAAACATTCCTGGTTGTGTCAAAACGTACTCAAAAGCCAAAAGGAGTGGTGAGGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000437018.2
CDS CAA 72 bp CAGAATTCACTGACTAGAACTGTGAACTCCTCGAAGTaGGTTCTATGTCTCATTCAATTTTGTGACCGGCGC +
Preference number: 6 (lower is better)
Translates to: QNSLTRTVNSSK*VLCLIQFCDRR
Trigger: GCGCCGGTCACAAAATTGAATGAGACATAGAACCAACTTCGAGGAGTTCACAGTTCTAGTCAGTGAATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS CAA 90 bp ATGAAGTCTCAGAATTCACTGACTAGAACTGTGAACTCCTCGAAGTaGGTTCTATGTCTCATTCAATTTTGTGACCGGCGCTTCACAGTG +
Preference number: 6 (lower is better)
Translates to: MKSQNSLTRTVNSSK*VLCLIQFCDRRFTV
Trigger: CACTGTGAAGCGCCGGTCACAAAATTGAATGAGACATAGAACCAACTTCGAGGAGTTCACAGTTCTAGTCAGTGAATTCTGAGACTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS CCA 72 bp ATCTTCTTGGAGGAATATTCTGAATATTTCTGGAGTTaGTCAAATTCTTCTGGAGTGAGGGAGACCCACCGT +
Preference number: 6 (lower is better)
Translates to: IFLEEYSEYFWS*SNSSGVRETHR
Trigger: ACGGTGGGTCTCCCTCACTCCAGAAGAATTTGACCAACTCCAGAAATATTCAGAATATTCCTCCAAGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000466466.1
ENST00000480809.5
CDS CAA 72 bp GAAGACATCATAGCTAATCGGCTCATGTGGGTCATATaGTTTGAGGCTCCCACCCTCATTAAATTCAGTCAA +
Preference number: 6 (lower is better)
Translates to: EDIIANRLMWVI*FEAPTLIKFSQ
Trigger: TTGACTGAATTTAATGAGGGTGGGAGCCTCAAACAATATGACCCACATGAGCCGATTAGCTATGATGTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265022.8
ENST00000344484.8
ENST00000382164.8
ENST00000480809.5
CDS CAA 72 bp AATGGAAATGTTCTTACCTCATGTGGGTCATATTGTTaGAGGCTCCCACCCTCATTAAATTCAGTCAAGGCA +
Preference number: 6 (lower is better)
Translates to: NGNVLTSCGSYC*RLPPSLNSVKA
Trigger: TGCCTTGACTGAATTTAATGAGGGTGGGAGCCTCAAACAATATGACCCACATGAGGTAAGAACATTTCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466466.1
CDS CCA 72 bp CTGTTGTTTAAGCTGTCAGTCTGTGGTATTCTATTATaGCACTCAAAGCAGACGAATATACCTTTACATACG +
Preference number: 6 (lower is better)
Translates to: LLFKLSVCGILL*HSKQTNIPLHT
Trigger: CGTATGTAAAGGTATATTCGTCTGCTTTGAGTGCCATAATAGAATACCACAGACTGACAGCTTAAACAACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS CAA 72 bp CTTTACTATTCCTTCAGCAGTGTCTCCTGCATGTTTTaGGCCTTTGTTAATATAATCTCAGGTTTGGGATAC +
Preference number: 6 (lower is better)
Translates to: LYYSFSSVSCMF*AFVNIISGLGY
Trigger: GTATCCCAAACCTGAGATTATATTAACAAAGGCCAAAAACATGCAGGAGACACTGCTGAAGGAATAGTAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS CAA 90 bp TTTAAAGGCTTAAAATGGAAATGTTCTTACCTCATGTGGGTCATATaGTTTGAGGCTCCCACCCTCATTAAATTCAGTCAAGGCATCTTT +
Preference number: 6 (lower is better)
Translates to: FKGLKWKCSYLMWVI*FEAPTLIKFSQGIF
Trigger: AAAGATGCCTTGACTGAATTTAATGAGGGTGGGAGCCTCAAACAATATGACCCACATGAGGTAAGAACATTTCCATTTTAAGCCTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466466.1
CDS CCA 72 bp TCAAAGCAGACGAATATACCTTTACATACGGATTTCTaGGCCTCACACTATGAAATCATTGGTTCACAAATT +
Preference number: 6 (lower is better)
Translates to: SKQTNIPLHTDF*ASHYEIIGSQI
Trigger: AATTTGTGAACCAATGATTTCATAGTGTGAGGCCCAGAAATCCGTATGTAAAGGTATATTCGTCTGCTTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS CAA 72 bp TTAAAATGGAAATGTTCTTACCTCATGTGGGTCATATaGTTTGAGGCTCCCACCCTCATTAAATTCAGTCAA +
Preference number: 6 (lower is better)
Translates to: LKWKCSYLMWVI*FEAPTLIKFSQ
Trigger: TTGACTGAATTTAATGAGGGTGGGAGCCTCAAACAATATGACCCACATGAGGTAAGAACATTTCCATTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466466.1
CDS CAA 72 bp ATCTACCATGGTGGCTTTGATCTCCTCATAAATCTCTaGTTGTTTAGGAGAATTTTTAAGTCTCCAAGTGAC +
Preference number: 6 (lower is better)
Translates to: IYHGGFDLLINL*LFRRIFKSPSD
Trigger: GTCACTTGGAGACTTAAAAATTCTCCTAAACAACAAGAGATTTATGAGGAGATCAAAGCCACCATGGTAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS CAA 90 bp TTCACATATCTTTACTATTCCTTCAGCAGTGTCTCCTGCATGTTTTaGGCCTTTGTTAATATAATCTCAGGTTTGGGATACAGGTTATTA +
Preference number: 6 (lower is better)
Translates to: FTYLYYSFSSVSCMF*AFVNIISGLGYRLL
Trigger: TAATAACCTGTATCCCAAACCTGAGATTATATTAACAAAGGCCAAAAACATGCAGGAGACACTGCTGAAGGAATAGTAAAGATATGTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS CAA 90 bp CTTAGCATTTTTAAACCTAATTTGTTGAAAAGACAGAATTCTTCTTaGAAGTTTGTGGCCCTTTGCCTGGTTGAGTATAAGGTTCTTGCA +
Preference number: 6 (lower is better)
Translates to: LSIFKPNLLKRQNSS*KFVALCLVEYKVLA
Trigger: TGCAAGAACCTTATACTCAACCAGGCAAAGGGCCACAAACTTCAAAGAAGAATTCTGTCTTTTCAACAAATTAGGTTTAAAAATGCTAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482566.1
CDS GCA 72 bp TTCACATATCTTTACTATTCCTTCAGCAGTGTCTCCTaGATGTTTTTGGCCTTTGTTAATATAATCTCAGGT +
Preference number: 6 (lower is better)
Translates to: FTYLYYSFSSVS*MFLAFVNIISG
Trigger: ACCTGAGATTATATTAACAAAGGCCAAAAACATGCAGGAGACACTGCTGAAGGAATAGTAAAGATATGTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS CCA 72 bp CTTTATAGAAGATGCTACCTTTTCTCAGCAGGTTCATaGAAACCTTCCTTTAGTAGAAGACAATTTGATGTT +
Preference number: 6 (lower is better)
Translates to: LYRRCYLFSAGS*KPSFSRRQFDV
Trigger: AACATCAAATTGTCTTCTACTAAAGGAAGGTTTCCATGAACCTGCTGAGAAAAGGTAGCATCTTCTATAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480809.5
CDS CAA 72 bp TTTAAACCTAATTTGTTGAAAAGACAGAATTCTTCTTaGAAGTTTGTGGCCCTTTGCCTGGTTGAGTATAAG +
Preference number: 6 (lower is better)
Translates to: FKPNLLKRQNSS*KFVALCLVEYK
Trigger: CTTATACTCAACCAGGCAAAGGGCCACAAACTTCAAAGAAGAATTCTGTCTTTTCAACAAATTAGGTTTAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482566.1