RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DGKE (Homo sapiens)

Ensembl gene IDs: ENSG00000153933

Ensembl transcript IDs: ENST00000284061.8, ENST00000570738.1, ENST00000571084.1, ENST00000572810.1, ENST00000572944.1, ENST00000576869.5

Found 491 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGACCACAAAGCCTGGGCCATGTGTCAGAAAAACACCAGGCTGGATaGCCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGG +
Preference number: 1 (lower is better)
Translates to: RPQSLGHVSEKHQAG*PLGQPTCGSRPLGW
Trigger: CCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCTGGTGTTTTTCTGACACATGGCCCAGGCTTTGTGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
3UTR CCA 90 bp GTCAGAAAAACACCAGGCTGGATGCCCTCTGGGTCAGCCGACCTGTaGGTCACGACCCTTGGGCTGGTCAACAGCAGCGAACAAGCACCC +
Preference number: 1 (lower is better)
Translates to: VRKTPGWMPSGSADL*VTTLGLVNSSEQAP
Trigger: GGGTGCTTGTTCGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCTGGTGTTTTTCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
3UTR CCA 90 bp AAAGCCTGGGCCATGTGTCAGAAAAACACCAGGCTGGATGCCCTCTaGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTCAACAG +
Preference number: 1 (lower is better)
Translates to: KAWAMCQKNTRLDAL*VSRPVGHDPWAGQQ
Trigger: CTGTTGACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCTGGTGTTTTTCTGACACATGGCCCAGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
3UTR TCA 90 bp GCCTCCATGGCTCACTGCCCCTTGGAGGCGCACTGCACTAACTCCTaGAGCAACTCCTTGTCCCCCAACACTGCATGGGTCACAGTCCAA +
Preference number: 1 (lower is better)
Translates to: ASMAHCPLEAHCTNS*SNSLSPNTAWVTVQ
Trigger: TTGGACTGTGACCCATGCAGTGTTGGGGGACAAGGAGTTGCTTCAGGAGTTAGTGCAGTGCGCCTCCAAGGGGCAGTGAGCCATGGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR CCA 90 bp GGATGCCCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTaGTCAACAGCAGCGAACAAGCACCCTCTAATGGGAACCATGAAA +
Preference number: 1 (lower is better)
Translates to: GCPLGQPTCGSRPLG*STAANKHPLMGTMK
Trigger: TTTCATGGTTCCCATTAGAGGGTGCTTGTTCGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGGGCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
3UTR GCA 90 bp AGATCTGAAGCAGCACTCAGTATACACAAGTGTGGCTGCATTGACTaGAGTGAGAAGGCAGGCGCCTCCATGGCTCACTGCCCCTTGGAG +
Preference number: 1 (lower is better)
Translates to: RSEAALSIHKCGCID*SEKAGASMAHCPLE
Trigger: CTCCAAGGGGCAGTGAGCCATGGAGGCGCCTGCCTTCTCACTGCAGTCAATGCAGCCACACTTGTGTATACTGAGTGCTGCTTCAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR TCA 90 bp GCAGGCTGGCTGAGGAGTGGAGGCTGGATGCATCGTCTCAGCAAATaGCTACTGCAAAGCTGCCACGCTTGCACAAACTCAGGGATGTTT +
Preference number: 1 (lower is better)
Translates to: AGWLRSGGWMHRLSK*LLQSCHACTNSGMF
Trigger: AAACATCCCTGAGTTTGTGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGAGACGATGCATCCAGCCTCCACTCCTCAGCCAGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
3UTR CCA 90 bp GTGGTAGTTACAAGTGGTGGGCAGGGGAAAGTGCAAGAGGCCAGCTaGCTGAGCAAGTGGAGTCATCACATGTGTCCTCAACATTGTGGG +
Preference number: 1 (lower is better)
Translates to: VVVTSGGQGKVQEAS*LSKWSHHMCPQHCG
Trigger: CCCACAATGTTGAGGACACATGTGATGACTCCACTTGCTCAGCCAGCTGGCCTCTTGCACTTTCCCCTGCCCACCACTTGTAACTACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR CCA 90 bp GACAGTGCAGGGCCCTTGGGCCCAAGGCTCCCCATCCACCTGCATTaGCATCATGGAGCACTTCAAAATCAGCTGATATTAGGGAACAAA +
Preference number: 1 (lower is better)
Translates to: DSAGPLGPRLPIHLH*HHGALQNQLILGNK
Trigger: TTTGTTCCCTAATATCAGCTGATTTTGAAGTGCTCCATGATGCCAATGCAGGTGGATGGGGAGCCTTGGGCCCAAGGGCCCTGCACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572944.1
3UTR TCA 90 bp CTCCAGAGAAATATAACATCATTGCATGTGTCTTGTGAGTTATGGTaGCAGTGCAGGGCCCTTGGGCCCAAGGCTCCCCATCCACCTGCA +
Preference number: 1 (lower is better)
Translates to: LQRNITSLHVSCELW*QCRALGPKAPHPPA
Trigger: TGCAGGTGGATGGGGAGCCTTGGGCCCAAGGGCCCTGCACTGTCACCATAACTCACAAGACACATGCAATGATGTTATATTTCTCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572944.1
3UTR GCA 90 bp TCATGTGCTCCAGTTTACCGAAGTCTCTACAACTCTTACCTTCGTTaGTTGCCCAGCTCCTGTAAGCACTTGCAACCCGTAGGTGGGCAT +
Preference number: 1 (lower is better)
Translates to: SCAPVYRSLYNSYLR*LPSSCKHLQPVGGH
Trigger: ATGCCCACCTACGGGTTGCAAGTGCTTACAGGAGCTGGGCAAGCAACGAAGGTAAGAGTTGTAGAGACTTCGGTAAACTGGAGCACATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR TCA 90 bp TTAACGTTAGGAGCCAAGTTTTATTACCCAAAAGGGCAGGCTGGCTaGGGAGTGGAGGCTGGATGCATCGTCTCAGCAAATGACTACTGC +
Preference number: 1 (lower is better)
Translates to: LTLGAKFYYPKGQAG*GVEAGCIVSANDYC
Trigger: GCAGTAGTCATTTGCTGAGACGATGCATCCAGCCTCCACTCCTCAGCCAGCCTGCCCTTTTGGGTAATAAAACTTGGCTCCTAACGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572810.1
3UTR GCA 90 bp GGAGTCATCACATGTGTCCTCAACATTGTGGGTTTAGGGATCCAGTaGAATCAGTTCACTTCTAAGAGGACTGGGGTTGAGGACTCGAGC +
Preference number: 1 (lower is better)
Translates to: GVITCVLNIVGLGIQ*NQFTSKRTGVEDSS
Trigger: GCTCGAGTCCTCAACCCCAGTCCTCTTAGAAGTGAACTGATTGCACTGGATCCCTAAACCCACAATGTTGAGGACACATGTGATGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR TCA 90 bp TCTGTTTGTTCTCCAGAGAAATATAACATCATTGCATGTGTCTTGTaGGTTATGGTGACAGTGCAGGGCCCTTGGGCCCAAGGCTCCCCA +
Preference number: 1 (lower is better)
Translates to: SVCSPEKYNIIACVL*VMVTVQGPWAQGSP
Trigger: TGGGGAGCCTTGGGCCCAAGGGCCCTGCACTGTCACCATAACTCACAAGACACATGCAATGATGTTATATTTCTCTGGAGAACAAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572944.1
3UTR CCA 90 bp CATTCTGATCTTTCAGAGATTAATGTCATGAAAGACCACAAAGCCTaGGCCATGTGTCAGAAAAACACCAGGCTGGATGCCCTCTGGGTC +
Preference number: 1 (lower is better)
Translates to: HSDLSEINVMKDHKA*AMCQKNTRLDALWV
Trigger: GACCCAGAGGGCATCCAGCCTGGTGTTTTTCTGACACATGGCCCAGGCTTTGTGGTCTTTCATGACATTAATCTCTGAAAGATCAGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
3UTR GCA 90 bp GGGTTTTTCTCAGCCAAATCTACTCATCTGATCAGGATGCCCTCTTaGCTGGACAATGTCAGAGGAACAAGGAAAACAACTGAGCTTTCC +
Preference number: 1 (lower is better)
Translates to: GFFSAKSTHLIRMPS*LDNVRGTRKTTELS
Trigger: GGAAAGCTCAGTTGTTTTCCTTGTTCCTCTGACATTGTCCAGGCAAGAGGGCATCCTGATCAGATGAGTAGATTTGGCTGAGAAAAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR GCA 90 bp TTAAAATTCTTTCCCCAGAACCCTGGAATGTACCTTTCTGGGCTATaGAAGCCTCATGCACTGACTACACAGGGCCACATGGGTAAATAT +
Preference number: 1 (lower is better)
Translates to: LKFFPQNPGMYLSGL*KPHALTTQGHMGKY
Trigger: ATATTTACCCATGTGGCCCTGTGTAGTCAGTGCATGAGGCTTGCATAGCCCAGAAAGGTACATTCCAGGGTTCTGGGGAAAGAATTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR TCA 90 bp AGAACCCTGGAATGTACCTTTCTGGGCTATGCAAGCCTCATGCACTaGCTACACAGGGCCACATGGGTAAATATATATGTATTGATGTGT +
Preference number: 1 (lower is better)
Translates to: RTLECTFLGYASLMH*LHRATWVNIYVLMC
Trigger: ACACATCAATACATATATATTTACCCATGTGGCCCTGTGTAGTCAGTGCATGAGGCTTGCATAGCCCAGAAAGGTACATTCCAGGGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR TCA 90 bp GGTTTGTTTAAGCAGTTCAGATCTGAAAGACTGCTGGCAGAGCCCTaGACTGGACTGAGAACAAACGTTTTTATGAGCCATCATCATCCA +
Preference number: 1 (lower is better)
Translates to: GLFKQFRSERLLAEP*TGLRTNVFMSHHHP
Trigger: TGGATGATGATGGCTCATAAAAACGTTTGTTCTCAGTCCAGTTCAGGGCTCTGCCAGCAGTCTTTCAGATCTGAACTGCTTAAACAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR GCA 90 bp ACAAACGTTTTTATGAGCCATCATCATCCACCTCCACAAAGTGCCTaGCTTACTCTAGGGTTTTTCTCAGCCAAATCTACTCATCTGATC +
Preference number: 1 (lower is better)
Translates to: TNVFMSHHHPPPQSA*LTLGFFSAKSTHLI
Trigger: GATCAGATGAGTAGATTTGGCTGAGAAAAACCCTAGAGTAAGGCAGGCACTTTGTGGAGGTGGATGATGATGGCTCATAAAAACGTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR GCA 90 bp GAGAACAAACGTTTTTATGAGCCATCATCATCCACCTCCACAAAGTaGCTGCCTTACTCTAGGGTTTTTCTCAGCCAAATCTACTCATCT +
Preference number: 1 (lower is better)
Translates to: ENKRFYEPSSSTSTK*LPYSRVFLSQIYSS
Trigger: AGATGAGTAGATTTGGCTGAGAAAAACCCTAGAGTAAGGCAGGCACTTTGTGGAGGTGGATGATGATGGCTCATAAAAACGTTTGTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR TCA 90 bp CCATCCATTGTGTGTCCATCATATGCATGGTTCAAAAATAAGACATaGGACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTC +
Preference number: 1 (lower is better)
Translates to: PSIVCPSYAWFKNKT*DSTYFRVSPTLKTV
Trigger: GACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTCTCATGTCTTATTTTTGAACCATGCATATGATGGACACACAATGGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
3UTR TCA 90 bp ACTGTATACATTACTAAGTTGCTCTTTGAAAACATGGTCTGGGCCTaGGGTGAGGCAAACTTAGGTTTATGGCAATTCATGGATGACAGA +
Preference number: 1 (lower is better)
Translates to: TVYITKLLFENMVWA*GEANLGLWQFMDDR
Trigger: TCTGTCATCCATGAATTGCCATAAACCTAAGTTTGCCTCACCTCAGGCCCAGACCATGTTTTCAAAGAGCAACTTAGTAATGTATACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
3UTR TCA 90 bp AATTCAATTTTTCGGCATGGTATCCCACCTAGCAAAAGCCCTAGGTaGATACATGAGGTTCAGACCAGAAGCTTTCAAATTTCAGTATGC +
Preference number: 1 (lower is better)
Translates to: NSIFRHGIPPSKSPR*IHEVQTRSFQISVC
Trigger: GCATACTGAAATTTGAAAGCTTCTGGTCTGAACCTCATGTATTCACCTAGGGCTTTTGCTAGGTGGGATACCATGCCGAAAAATTGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR TCA 90 bp GTTTTCACTCCCTCATCCATCTATTCAGTCGCCTTTATATCTTCTTaGTCCGAAGTACTAGAGATGTCATCATCTGTTTGTTCTCCAGAG +
Preference number: 1 (lower is better)
Translates to: VFTPSSIYSVAFISS*SEVLEMSSSVCSPE
Trigger: CTCTGGAGAACAAACAGATGATGACATCTCTAGTACTTCGGATCAAGAAGATATAAAGGCGACTGAATAGATGGATGAGGGAGTGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572944.1
3UTR GCA 90 bp AAAAAGAAGCAAGTATCTTCAACATACCAAATGCTTTCACATTTCTaGCTGCAGGCACTGACCACAAAAATACAGACCCAACACAACAAA +
Preference number: 1 (lower is better)
Translates to: KKKQVSSTYQMLSHF*LQALTTKIQTQHNK
Trigger: TTTGTTGTGTTGGGTCTGTATTTTTGTGGTCAGTGCCTGCAGGCAGAAATGTGAAAGCATTTGGTATGTTGAAGATACTTGCTTCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR TCA 90 bp CAGTTTATATGCGTGAGAATGAATGTTTCTCCTAACACACGTGTATaGTTCTGTGCTCTTAGGCTACAAAAGCCATGCAATATGAATTTT +
Preference number: 1 (lower is better)
Translates to: QFICVRMNVSPNTRV*FCALRLQKPCNMNF
Trigger: AAAATTCATATTGCATGGCTTTTGTAGCCTAAGAGCACAGAATCATACACGTGTGTTAGGAGAAACATTCATTCTCACGCATATAAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR GCA 90 bp TTAATACTTTTGGATGAACATGTATCTACTTGCGTGAGGATTCTATaGAAAGTTTTCACTCCCTCATCCATCTATTCAGTCGCCTTTATA +
Preference number: 1 (lower is better)
Translates to: LILLDEHVSTCVRIL*KVFTPSSIYSVAFI
Trigger: TATAAAGGCGACTGAATAGATGGATGAGGGAGTGAAAACTTTGCATAGAATCCTCACGCAAGTAGATACATGTTCATCCAAAAGTATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572944.1
3UTR CCA 90 bp TTTGAGGCTCAGGAAGAACAAGTGTTAAGTTACAGTAGTAGAGGCTaGGTTTCCATTCAGGTATTTCAAATAAGTGATACATTTTTCCAT +
Preference number: 1 (lower is better)
Translates to: FEAQEEQVLSYSSRG*VSIQVFQISDTFFH
Trigger: ATGGAAAAATGTATCACTTATTTGAAATACCTGAATGGAAACCCAGCCTCTACTACTGTAACTTAACACTTGTTCTTCCTGAGCCTCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR-3UTR GCA 90 bp TCTTTGGCCCAGGCCCCACTGCAGTGGCACTATCTCGGCTCGCTGCAAGCTCCGAAACACCAGGCTGGATaGCCTCTGGGTCAGCCGACC +
Preference number: 2 (lower is better)
Translates to: SLAQAPLQWHYLGSLQAPKHQAG*PLGQPT
Trigger: GGTCGGCTGACCCAGAGGGCATCCAGCCTGGTGTTT...CGGAGCTTGCAGCGAGCCGAGATAGTGCCACTGCAGTGGGGCCTGGGCCAAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR CAA 90 bp CAGGCTGGATGCCCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTaGGGCTGGTCAACAGCAGCGAACAAGCACCCTCTAATGGGAACC +
Preference number: 2 (lower is better)
Translates to: QAGCPLGQPTCGSRP*GWSTAANKHPLMGT
Trigger: GGTTCCCATTAGAGGGTGCTTGTTCGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
3UTR-3UTR TCA 90 bp CCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTCAACAGCAGCGTCTTGTGAGTTATGGTaGCAGTGCAGGGCCCTTGGG +
Preference number: 2 (lower is better)
Translates to: PLGQPTCGSRPLGWSTAASCELW*QCRALG
Trigger: CCCAAGGGCCCTGCACTGTCACCATAACTCACAAGA...CGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572944.1
3UTR-3UTR CCA 90 bp AGAAGGCAGGCGCCTCCATGGCTCACTGCCCCTTGGAGGCGCACTGCACTAACTAGAAAAACACCAGGCTaGATGCCCTCTGGGTCAGCC +
Preference number: 2 (lower is better)
Translates to: RRQAPPWLTAPWRRTALTRKTPG*MPSGSA
Trigger: GGCTGACCCAGAGGGCATCCAGCCTGGTGTTTTTCT...AGTTAGTGCAGTGCGCCTCCAAGGGGCAGTGAGCCATGGAGGCGCCTGCCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR-3UTR CCA 90 bp GGTGGGCAGGGGAAAGTGCAAGAGGCCAGCTGGCTGAGCAAGTGGAGTCATCACTCACGACCCTTGGGCTaGTCAACAGCAGCGAACAAG +
Preference number: 2 (lower is better)
Translates to: GGQGKVQEASWLSKWSHHSRPLG*STAANK
Trigger: CTTGTTCGCTGCTGTTGACCAGCCCAAGGGTCGTGA...GTGATGACTCCACTTGCTCAGCCAGCTGGCCTCTTGCACTTTCCCCTGCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR-3UTR TCA 90 bp TCTTTGGCCCAGGCCCCACTGCAGTGGCACTATCTCGGCTCGCTGCAAGCTCCGGCACATACTTCAGAGTaGGTCCCACTCTCAAAACAG +
Preference number: 2 (lower is better)
Translates to: SLAQAPLQWHYLGSLQAPAHTSE*VPLSKQ
Trigger: CTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGC...CGGAGCTTGCAGCGAGCCGAGATAGTGCCACTGCAGTGGGGCCTGGGCCAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR-3UTR CCA 90 bp CCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTCAACAGCAGCGCCACCCACACCTTGTTaGAGATATAATGTGTCCATC +
Preference number: 2 (lower is better)
Translates to: PLGQPTCGSRPLGWSTAAPPTPC*RYNVSI
Trigger: GATGGACACATTATATCTCCAACAAGGTGTGGGTGG...CGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
3UTR-3UTR TCA 90 bp TCTTTGGCCCAGGCCCCACTGCAGTGGCACTATCTCGGCTCGCTGCAAGCTCCGCAGAGATTAATGTCATaGAAGACCACAAAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: SLAQAPLQWHYLGSLQAPQRLMS*KTTKPG
Trigger: CCCAGGCTTTGTGGTCTTTCATGACATTAATCTCTG...CGGAGCTTGCAGCGAGCCGAGATAGTGCCACTGCAGTGGGGCCTGGGCCAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR-3UTR CCA 90 bp TCTTTGGCCCAGGCCCCACTGCAGTGGCACTATCTCGGCTCGCTGCAAGCTCCGCCACCCACACCTTGTTaGAGATATAATGTGTCCATC +
Preference number: 2 (lower is better)
Translates to: SLAQAPLQWHYLGSLQAPPPTPC*RYNVSI
Trigger: GATGGACACATTATATCTCCAACAAGGTGTGGGTGG...CGGAGCTTGCAGCGAGCCGAGATAGTGCCACTGCAGTGGGGCCTGGGCCAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR-3UTR TCA 90 bp AGGCTGGATGCCCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTATGTATCTACTTGCGTaGGGATTCTATGCAAAGTTT +
Preference number: 2 (lower is better)
Translates to: RLDALWVSRPVGHDPWAGMYLLA*GFYAKF
Trigger: AAACTTTGCATAGAATCCTCACGCAAGTAGATACAT...ACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
3UTR-3UTR TCA 90 bp AGGCTGGATGCCCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTCAATCCCAAGTGCTCTaGATCTTATTTCTTACCAAT +
Preference number: 2 (lower is better)
Translates to: RLDALWVSRPVGHDPWAGQSQVL*ILFLTN
Trigger: ATTGGTAAGAAATAAGATTCAGAGCACTTGGGATTG...ACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
3UTR-3UTR CCA 90 bp AGGCTGGATGCCCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTGAACGTTTTATCTCATaGATCTTGAGCCATGTTTCT +
Preference number: 2 (lower is better)
Translates to: RLDALWVSRPVGHDPWAGERFIS*ILSHVS
Trigger: AGAAACATGGCTCAAGATCCATGAGATAAAACGTTC...ACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572944.1
3UTR-3UTR TCA 90 bp AGAAGGCAGGCGCCTCCATGGCTCACTGCCCCTTGGAGGCGCACTGCACTAACTAAAAGCAGGTTAATTTaGTCTTTCCACCCACACCTT +
Preference number: 2 (lower is better)
Translates to: RRQAPPWLTAPWRRTALTKSRLI*SFHPHL
Trigger: AAGGTGTGGGTGGAAAGATCAAATTAACCTGCTTTT...AGTTAGTGCAGTGCGCCTCCAAGGGGCAGTGAGCCATGGAGGCGCCTGCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR-3UTR GCA 90 bp CCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTCAACAGCAGCGTGGCTGGTTTGGGGATaGTATTTACAAAAATGTATA +
Preference number: 2 (lower is better)
Translates to: PLGQPTCGSRPLGWSTAAWLVWG*YLQKCI
Trigger: TATACATTTTTGTAAATAGCATCCCCAAACCAGCCA...CGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
3UTR-3UTR CCA 90 bp AGGCTGGATGCCCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTTTACTATTCTCCTTTTaGGGGTTCCTAGAAATCAAT +
Preference number: 2 (lower is better)
Translates to: RLDALWVSRPVGHDPWAGLLFSF*GFLEIN
Trigger: ATTGATTTCTAGGAACCCCCAAAAGGAGAATAGTAA...ACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
3UTR-3UTR GCA 90 bp TCTTTGGCCCAGGCCCCACTGCAGTGGCACTATCTCGGCTCGCTGCAAGCTCCGTACACTTATTTGAAATaGTGGGTAAATGTGCCCAAA +
Preference number: 2 (lower is better)
Translates to: SLAQAPLQWHYLGSLQAPYTYLK*WVNVPK
Trigger: TTTGGGCACATTTACCCAGCATTTCAAATAAGTGTA...CGGAGCTTGCAGCGAGCCGAGATAGTGCCACTGCAGTGGGGCCTGGGCCAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR-3UTR CCA 90 bp AACATTGTGGGTTTAGGGATCCAGTGCAATCAGTTCACTTCTAAGAGGACTGGGTGGCTCACTGCCCCTTaGAGGCGCACTGCACTAACT +
Preference number: 2 (lower is better)
Translates to: NIVGLGIQCNQFTSKRTGWLTAP*RRTALT
Trigger: AGTTAGTGCAGTGCGCCTCCAAGGGGCAGTGAGCCA...CCCAGTCCTCTTAGAAGTGAACTGATTGCACTGGATCCCTAAACCCACAATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR-3UTR TCA 90 bp CCCAGGAATCATGTGCTCCAGTTTACCGAAGTCTCTACAACTCTTACCTTCGTTAAGAGGCCAGCTGGCTaGGCAAGTGGAGTCATCACA +
Preference number: 2 (lower is better)
Translates to: PRNHVLQFTEVSTTLTFVKRPAG*ASGVIT
Trigger: TGTGATGACTCCACTTGCTCAGCCAGCTGGCCTCTT...AACGAAGGTAAGAGTTGTAGAGACTTCGGTAAACTGGAGCACATGATTCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR-3UTR GCA 90 bp CCCAGGAATCATGTGCTCCAGTTTACCGAAGTCTCTACAACTCTTACCTTCGTTTTGCCCAGGCTGGAGTaGAGTCATGTGATCTCCGCT +
Preference number: 2 (lower is better)
Translates to: PRNHVLQFTEVSTTLTFVLPRLE*SHVISA
Trigger: AGCGGAGATCACATGACTGCACTCCAGCCTGGGCAA...AACGAAGGTAAGAGTTGTAGAGACTTCGGTAAACTGGAGCACATGATTCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR-3UTR CCA 90 bp TTTACTATTCTCCTTTTGGGGGTTCCTAGAAATCAATACATACACTTGGTTTGGACAGTGCAGGGCCCTTaGGCCCAAGGCTCCCCATCC +
Preference number: 2 (lower is better)
Translates to: FTILLLGVPRNQYIHLVWTVQGP*AQGSPS
Trigger: GGATGGGGAGCCTTGGGCCCAAGGGCCCTGCACTGT...CCAAACCAAGTGTATGTATTGATTTCTAGGAACCCCCAAAAGGAGAATAGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572944.1
3UTR-3UTR TCA 90 bp CCCAGGAATCATGTGCTCCAGTTTACCGAAGTCTCTACAACTCTTACCTTCGTTCTGCAGCGCGTACTCTaGAGAACAAGAGAAAGGCTT +
Preference number: 2 (lower is better)
Translates to: PRNHVLQFTEVSTTLTFVLQRVL*RTRERL
Trigger: AAGCCTTTCTCTTGTTCTTCAGAGTACGCGCTGCAG...AACGAAGGTAAGAGTTGTAGAGACTTCGGTAAACTGGAGCACATGATTCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR-3UTR TCA 90 bp AACATTGTGGGTTTAGGGATCCAGTGCAATCAGTTCACTTCTAAGAGGACTGGGGGCGTTTCACCATGTTaGCCAGGCTTGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: NIVGLGIQCNQFTSKRTGGVSPC*PGLSQT
Trigger: AGTTTGAGACAAGCCTGGTCAACATGGTGAAACGCC...CCCAGTCCTCTTAGAAGTGAACTGATTGCACTGGATCCCTAAACCCACAATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR-3UTR GCA 90 bp CCCAGGAATCATGTGCTCCAGTTTACCGAAGTCTCTACAACTCTTACCTTCGTTTCCACCTCCACAAAGTaGCTGCCTTACTCTAGGGTT +
Preference number: 2 (lower is better)
Translates to: PRNHVLQFTEVSTTLTFVSTSTK*LPYSRV
Trigger: AACCCTAGAGTAAGGCAGGCACTTTGTGGAGGTGGA...AACGAAGGTAAGAGTTGTAGAGACTTCGGTAAACTGGAGCACATGATTCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR-3UTR GCA 90 bp AACATTGTGGGTTTAGGGATCCAGTGCAATCAGTTCACTTCTAAGAGGACTGGGTACCTTTCTGGGCTATaGAAGCCTCATGCACTGACT +
Preference number: 2 (lower is better)
Translates to: NIVGLGIQCNQFTSKRTGYLSGL*KPHALT
Trigger: AGTCAGTGCATGAGGCTTGCATAGCCCAGAAAGGTA...CCCAGTCCTCTTAGAAGTGAACTGATTGCACTGGATCCCTAAACCCACAATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR-3UTR CCA 90 bp GAACAAAAGCTAAAATATACAGTGGCCATGAAGCAGGCACCACTTAGAAACCTCCTGAGGAGTGGAGGCTaGATGCATCGTCTCAGCAAA +
Preference number: 2 (lower is better)
Translates to: EQKLKYTVAMKQAPLRNLLRSGG*MHRLSK
Trigger: TTTGCTGAGACGATGCATCCAGCCTCCACTCCTCAG...GAGGTTTCTAAGTGGTGCCTGCTTCATGGCCACTGTATATTTTAGCTTTTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572810.1
3UTR-3UTR TCA 90 bp TTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCACATTTGTAAATAACTaGAGGCTGGCTGGTTTGGGG +
Preference number: 2 (lower is better)
Translates to: FPPTPCWRYNVSIHCVSITFVNN*RLAGLG
Trigger: CCCCAAACCAGCCAGCCTTCAGTTATTTACAAATGT...GATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
3UTR-3UTR GCA 90 bp GAACAAAAGCTAAAATATACAGTGGCCATGAAGCAGGCACCACTTAGAAACCTCTCAGCAAATGACTACTaGAAAGCTGCCACGCTTGCA +
Preference number: 2 (lower is better)
Translates to: EQKLKYTVAMKQAPLRNLSANDY*KAATLA
Trigger: TGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGA...GAGGTTTCTAAGTGGTGCCTGCTTCATGGCCACTGTATATTTTAGCTTTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572810.1
3UTR-3UTR TCA 90 bp ACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATGCATGGCACATACTTCAGAGTaGGTCCCACTCTCAAAACAG +
Preference number: 2 (lower is better)
Translates to: TPCWRYNVSIHCVSIICMAHTSE*VPLSKQ
Trigger: CTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGC...CATGCATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
3UTR-3UTR GCA 90 bp GACATGAGACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACTGCGTGAGGATTCTATaGAAAGTTTTCACTCCCTCA +
Preference number: 2 (lower is better)
Translates to: DMRQHILQSESHSQNSHNCVRIL*KVFTPS
Trigger: TGAGGGAGTGAAAACTTTGCATAGAATCCTCACGCA...GTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTCTCATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
3UTR-3UTR CCA 90 bp CACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATCCACCCACACCTTGTTaGAGATATAATGTGTCCATC +
Preference number: 2 (lower is better)
Translates to: HPHLVGDIMCPSIVCPSYPPTPC*RYNVSI
Trigger: GATGGACACATTATATCTCCAACAAGGTGTGGGTGG...ATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
3UTR CAA 90 bp AAGAATCGCCTGAGGCGCTTGTTAATAAAAACAGAGATTTCTATGTaGCATCTCCAGAGACAGGGAATCATTAAGTTAAGGGTTGGGCTC +
Preference number: 2 (lower is better)
Translates to: KNRLRRLLIKTEISM*HLQRQGIIKLRVGL
Trigger: GAGCCCAACCCTTAACTTAATGATTCCCTGTCTCTGGAGATGCAACATAGAAATCTCTGTTTTTATTAACAAGCGCCTCAGGCGATTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR-3UTR TCA 90 bp AGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCTTTCAAGCACATACTTCAGAGTaGGTCCCACTCTCAAAACAG +
Preference number: 2 (lower is better)
Translates to: RRMLTINHAGLTVIISFQAHTSE*VPLSKQ
Trigger: CTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGC...TTGAAAGGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
3UTR-3UTR TCA 90 bp AACATTGTGGGTTTAGGGATCCAGTGCAATCAGTTCACTTCTAAGAGGACTGGGAACATGACGAAACACTaGAAATTATCATCATCTGCC +
Preference number: 2 (lower is better)
Translates to: NIVGLGIQCNQFTSKRTGNMTKH*KLSSSA
Trigger: GGCAGATGATGATAATTTTCAGTGTTTCGTCATGTT...CCCAGTCCTCTTAGAAGTGAACTGATTGCACTGGATCCCTAAACCCACAATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR-3UTR GCA 90 bp CACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATTGCGTGAGGATTCTATaGAAAGTTTTCACTCCCTCA +
Preference number: 2 (lower is better)
Translates to: HPHLVGDIMCPSIVCPSYCVRIL*KVFTPS
Trigger: TGAGGGAGTGAAAACTTTGCATAGAATCCTCACGCA...ATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
3UTR-3UTR GCA 90 bp GACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTTGTACAGTGACCAGCTaGATGAGCCATAAACCACTG +
Preference number: 2 (lower is better)
Translates to: DSTYFRVSPTLKTVITNFCTVTS*MSHKPL
Trigger: CAGTGGTTTATGGCTCATGCAGCTGGTCACTGTACA...AAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572944.1
3UTR-3UTR TCA 90 bp GACATGAGACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACATGTATCTACTTGCGTaGGGATTCTATGCAAAGTTT +
Preference number: 2 (lower is better)
Translates to: DMRQHILQSESHSQNSHNMYLLA*GFYAKF
Trigger: AAACTTTGCATAGAATCCTCACGCAAGTAGATACAT...GTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTCTCATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
3UTR-3UTR TCA 90 bp GACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTACATTTGTAAATAACTaGAGGCTGGCTGGTTTGGGG +
Preference number: 2 (lower is better)
Translates to: DSTYFRVSPTLKTVITNFTFVNN*RLAGLG
Trigger: CCCCAAACCAGCCAGCCTTCAGTTATTTACAAATGT...AAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
3UTR-3UTR TCA 90 bp AAAGTCCCTGCTAACTTGGCTCTCACTGATGCCAGAAGGACAGCATTTAATTTTCATCAGTTTTGCGGCTaGAGGGAAAAGTTAATTTGT +
Preference number: 2 (lower is better)
Translates to: KVPANLALTDARRTAFNFHQFCG*REKLIC
Trigger: ACAAATTAACTTTTCCCTTCAGCCGCAAAACTGATG...AAAATTAAATGCTGTCCTTCTGGCATCAGTGAGAGCCAAGTTAGCAGGGACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572810.1
3UTR-3UTR GCA 90 bp TGCTGCAGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCGAACATGTATCTACTTaGGTGAGGATTCTATGCAAA +
Preference number: 2 (lower is better)
Translates to: CCRRMLTINHAGLTVIISEHVST*VRILCK
Trigger: TTTGCATAGAATCCTCACGCAAGTAGATACATGTTC...GGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCTGCAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
3UTR-3UTR CCA 90 bp AACATTGTGGGTTTAGGGATCCAGTGCAATCAGTTCACTTCTAAGAGGACTGGGGAATTGCAGCTCAAATaGTTACCTACAGAATTAAAC +
Preference number: 2 (lower is better)
Translates to: NIVGLGIQCNQFTSKRTGELQLK*LPTELN
Trigger: GTTTAATTCTGTAGGTAACCATTTGAGCTGCAATTC...CCCAGTCCTCTTAGAAGTGAACTGATTGCACTGGATCCCTAAACCCACAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR CAA 90 bp AAATTCTCTAGATTACAGCTTATTTCCTGTTTAGTGCATTCTGTGTaGATGTCGTCCTTTAACAGTGAGGTAGCTCAGGGCATCCTTAGA +
Preference number: 2 (lower is better)
Translates to: KFSRLQLISCLVHSV*MSSFNSEVAQGILR
Trigger: TCTAAGGATGCCCTGAGCTACCTCACTGTTAAAGGACGACATCAACACAGAATGCACTAAACAGGAAATAAGCTGTAATCTAGAGAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR CAA 90 bp TCTTTCTGTCTAAAAGTATGTGATCAGAACTTGCCACATATATGTTaGCCCTGCTGTAGACCAAGAACCACTTTTTGGGACACTAAGTCA +
Preference number: 2 (lower is better)
Translates to: SFCLKVCDQNLPHIC*PCCRPRTTFWDTKS
Trigger: TGACTTAGTGTCCCAAAAAGTGGTTCTTGGTCTACAGCAGGGCAAACATATATGTGGCAAGTTCTGATCACATACTTTTAGACAGAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR CAA 90 bp ACATTTTTCCATACTCTACCAACTGAAAATAAGGTGAATTCACCTTaGATCCCACTTACTGCTCTACTCTGCCAGGAGCCAGTTTATATG +
Preference number: 2 (lower is better)
Translates to: TFFHTLPTENKVNSP*IPLTALLCQEPVYM
Trigger: CATATAAACTGGCTCCTGGCAGAGTAGAGCAGTAAGTGGGATCAAAGGTGAATTCACCTTATTTTCAGTTGGTAGAGTATGGAAAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR CAA 90 bp AGTTTTCACTCCCTCATCCATCTATTCAGTCGCCTTTATATCTTCTaGATCCGAAGTACTAGAGATGTCATCATCTGTTTGTTCTCCAGA +
Preference number: 2 (lower is better)
Translates to: SFHSLIHLFSRLYIF*IRSTRDVIICLFSR
Trigger: TCTGGAGAACAAACAGATGATGACATCTCTAGTACTTCGGATCAAGAAGATATAAAGGCGACTGAATAGATGGATGAGGGAGTGAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572944.1
3UTR-3UTR GCA 90 bp GACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTTGCGTGAGGATTCTATaGAAAGTTTTCACTCCCTCA +
Preference number: 2 (lower is better)
Translates to: DSTYFRVSPTLKTVITNFCVRIL*KVFTPS
Trigger: TGAGGGAGTGAAAACTTTGCATAGAATCCTCACGCA...AAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
3UTR CAA 90 bp CAGAAGCTTTCAAATTTCAGTATGCTTAAGAATCGCCTGAGGCGCTaGTTAATAAAAACAGAGATTTCTATGTTGCATCTCCAGAGACAG +
Preference number: 2 (lower is better)
Translates to: QKLSNFSMLKNRLRR*LIKTEISMLHLQRQ
Trigger: CTGTCTCTGGAGATGCAACATAGAAATCTCTGTTTTTATTAACAAGCGCCTCAGGCGATTCTTAAGCATACTGAAATTTGAAAGCTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR-3UTR TCA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGATGTATCTACTTGCGTaGGGATTCTATGCAAAGTTT +
Preference number: 2 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVMYLLA*GFYAKF
Trigger: AAACTTTGCATAGAATCCTCACGCAAGTAGATACAT...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
3UTR-3UTR GCA 90 bp CTGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGAACATGTATCTACTTaGGTGAGGATTCTATGCAAA +
Preference number: 2 (lower is better)
Translates to: LAGLGMLFTKMYTHYTTSEHVST*VRILCK
Trigger: TTTGCATAGAATCCTCACGCAAGTAGATACATGTTC...ACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
3UTR-3UTR GCA 90 bp GACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTTGGCTGGTTTGGGGATaGTATTTACAAAAATGTATA +
Preference number: 2 (lower is better)
Translates to: DSTYFRVSPTLKTVITNFWLVWG*YLQKCI
Trigger: TATACATTTTTGTAAATAGCATCCCCAAACCAGCCA...AAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
3UTR CCA 72 bp ACACCAGGCTGGATGCCCTCTGGGTCAGCCGACCTGTaGGTCACGACCCTTGGGCTGGTCAACAGCAGCGAA +
Preference number: 3 (lower is better)
Translates to: TPGWMPSGSADL*VTTLGLVNSSE
Trigger: TTCGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCTGGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
3UTR GCA 72 bp AGCCTGGGCCATGTGTCAGAAAAACACCAGGCTGGATaGCCTCTGGGTCAGCCGACCTGTGGGTCACGACCC +
Preference number: 3 (lower is better)
Translates to: SLGHVSEKHQAG*PLGQPTCGSRP
Trigger: GGGTCGTGACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCTGGTGTTTTTCTGACACATGGCCCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
3UTR-3UTR CAA 90 bp GGTGGGCAGGGGAAAGTGCAAGAGGCCAGCTGGCTGAGCAAGTGGAGTCATCACATGGAGTCTCACTCTTaGGCCCAGGCCCCACTGCAG +
Preference number: 3 (lower is better)
Translates to: GGQGKVQEASWLSKWSHHMESHS*AQAPLQ
Trigger: CTGCAGTGGGGCCTGGGCCAAAGAGTGAGACTCCAT...GTGATGACTCCACTTGCTCAGCCAGCTGGCCTCTTGCACTTTCCCCTGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR CCA 72 bp CTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTaGTCAACAGCAGCGAACAAGCACCCTCTAATGGGA +
Preference number: 3 (lower is better)
Translates to: LGQPTCGSRPLG*STAANKHPLMG
Trigger: TCCCATTAGAGGGTGCTTGTTCGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
3UTR CCA 72 bp GCCATGTGTCAGAAAAACACCAGGCTGGATGCCCTCTaGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCT +
Preference number: 3 (lower is better)
Translates to: AMCQKNTRLDAL*VSRPVGHDPWA
Trigger: AGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCTGGTGTTTTTCTGACACATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
3UTR CCA 72 bp GTGAGAAGGCAGGCGCCTCCATGGCTCACTGCCCCTTaGAGGCGCACTGCACTAACTCCTGAAGCAACTCCT +
Preference number: 3 (lower is better)
Translates to: VRRQAPPWLTAP*RRTALTPEATP
Trigger: AGGAGTTGCTTCAGGAGTTAGTGCAGTGCGCCTCCAAGGGGCAGTGAGCCATGGAGGCGCCTGCCTTCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR TCA 72 bp GCTCACTGCCCCTTGGAGGCGCACTGCACTAACTCCTaGAGCAACTCCTTGTCCCCCAACACTGCATGGGTC +
Preference number: 3 (lower is better)
Translates to: AHCPLEAHCTNS*SNSLSPNTAWV
Trigger: GACCCATGCAGTGTTGGGGGACAAGGAGTTGCTTCAGGAGTTAGTGCAGTGCGCCTCCAAGGGGCAGTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR-3UTR CAA 90 bp AGGCTGGATGCCCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTTTACTAAGTTGCTCTTaGAAAACATGGTCTGGGCCT +
Preference number: 3 (lower is better)
Translates to: RLDALWVSRPVGHDPWAGLLSCS*KTWSGP
Trigger: AGGCCCAGACCATGTTTTCAAAGAGCAACTTAGTAA...ACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
3UTR GCA 72 bp GCAGCACTCAGTATACACAAGTGTGGCTGCATTGACTaGAGTGAGAAGGCAGGCGCCTCCATGGCTCACTGC +
Preference number: 3 (lower is better)
Translates to: AALSIHKCGCID*SEKAGASMAHC
Trigger: GCAGTGAGCCATGGAGGCGCCTGCCTTCTCACTGCAGTCAATGCAGCCACACTTGTGTATACTGAGTGCTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR TCA 72 bp GTGGTGGGCAGGGGAAAGTGCAAGAGGCCAGCTGGCTaGGCAAGTGGAGTCATCACATGTGTCCTCAACATT +
Preference number: 3 (lower is better)
Translates to: VVGRGKCKRPAG*ASGVITCVLNI
Trigger: AATGTTGAGGACACATGTGATGACTCCACTTGCTCAGCCAGCTGGCCTCTTGCACTTTCCCCTGCCCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR CCA 72 bp ACAAGTGGTGGGCAGGGGAAAGTGCAAGAGGCCAGCTaGCTGAGCAAGTGGAGTCATCACATGTGTCCTCAA +
Preference number: 3 (lower is better)
Translates to: TSGGQGKVQEAS*LSKWSHHMCPQ
Trigger: TTGAGGACACATGTGATGACTCCACTTGCTCAGCCAGCTGGCCTCTTGCACTTTCCCCTGCCCACCACTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR GCA 72 bp ACAGCCTGCCCAGGCATTCTGATGCTGCAGATAGCCTaGAGCGCGTACTCTGAAGAACAAGAGAAAGGCTTC +
Preference number: 3 (lower is better)
Translates to: TACPGILMLQIA*SAYSEEQEKGF
Trigger: GAAGCCTTTCTCTTGTTCTTCAGAGTACGCGCTGCAGGCTATCTGCAGCATCAGAATGCCTGGGCAGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR CCA 72 bp GGGCCCTTGGGCCCAAGGCTCCCCATCCACCTGCATTaGCATCATGGAGCACTTCAAAATCAGCTGATATTA +
Preference number: 3 (lower is better)
Translates to: GPLGPRLPIHLH*HHGALQNQLIL
Trigger: TAATATCAGCTGATTTTGAAGTGCTCCATGATGCCAATGCAGGTGGATGGGGAGCCTTGGGCCCAAGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572944.1
3UTR-3UTR CAA 90 bp AACATTGTGGGTTTAGGGATCCAGTGCAATCAGTTCACTTCTAAGAGGACTGGGTGTGGGTCACGACCCTaGGGCTGGTCAACAGCAGCG +
Preference number: 3 (lower is better)
Translates to: NIVGLGIQCNQFTSKRTGCGSRP*GWSTAA
Trigger: CGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCACA...CCCAGTCCTCTTAGAAGTGAACTGATTGCACTGGATCCCTAAACCCACAATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR TCA 72 bp CTGAGGAGTGGAGGCTGGATGCATCGTCTCAGCAAATaGCTACTGCAAAGCTGCCACGCTTGCACAAACTCA +
Preference number: 3 (lower is better)
Translates to: LRSGGWMHRLSK*LLQSCHACTNS
Trigger: TGAGTTTGTGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGAGACGATGCATCCAGCCTCCACTCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
3UTR GCA 72 bp TTTCCCCAGAACCCTGGAATGTACCTTTCTGGGCTATaGAAGCCTCATGCACTGACTACACAGGGCCACATG +
Preference number: 3 (lower is better)
Translates to: FPQNPGMYLSGL*KPHALTTQGHM
Trigger: CATGTGGCCCTGTGTAGTCAGTGCATGAGGCTTGCATAGCCCAGAAAGGTACATTCCAGGGTTCTGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR GCA 72 bp GTGGAGGCTGGATGCATCGTCTCAGCAAATGACTACTaGAAAGCTGCCACGCTTGCACAAACTCAGGGATGT +
Preference number: 3 (lower is better)
Translates to: VEAGCIVSANDY*KAATLAQTQGC
Trigger: ACATCCCTGAGTTTGTGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGAGACGATGCATCCAGCCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
3UTR TCA 72 bp AATATAACATCATTGCATGTGTCTTGTGAGTTATGGTaGCAGTGCAGGGCCCTTGGGCCCAAGGCTCCCCAT +
Preference number: 3 (lower is better)
Translates to: NITSLHVSCELW*QCRALGPKAPH
Trigger: ATGGGGAGCCTTGGGCCCAAGGGCCCTGCACTGTCACCATAACTCACAAGACACATGCAATGATGTTATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572944.1
3UTR GCA 72 bp CCAGTTTACCGAAGTCTCTACAACTCTTACCTTCGTTaGTTGCCCAGCTCCTGTAAGCACTTGCAACCCGTA +
Preference number: 3 (lower is better)
Translates to: PVYRSLYNSYLR*LPSSCKHLQPV
Trigger: TACGGGTTGCAAGTGCTTACAGGAGCTGGGCAAGCAACGAAGGTAAGAGTTGTAGAGACTTCGGTAAACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR CCA 72 bp AGTTTTATTACCCAAAAGGGCAGGCTGGCTGAGGAGTaGAGGCTGGATGCATCGTCTCAGCAAATGACTACT +
Preference number: 3 (lower is better)
Translates to: SFITQKGRLAEE*RLDASSQQMTT
Trigger: AGTAGTCATTTGCTGAGACGATGCATCCAGCCTCCACTCCTCAGCCAGCCTGCCCTTTTGGGTAATAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572810.1
3UTR CCA 72 bp AAAATTCTTTCCCCAGAACCCTGGAATGTACCTTTCTaGGCTATGCAAGCCTCATGCACTGACTACACAGGG +
Preference number: 3 (lower is better)
Translates to: KILSPEPWNVPF*AMQASCTDYTG
Trigger: CCCTGTGTAGTCAGTGCATGAGGCTTGCATAGCCCAGAAAGGTACATTCCAGGGTTCTGGGGAAAGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR-3UTR CAA 90 bp AACATTGTGGGTTTAGGGATCCAGTGCAATCAGTTCACTTCTAAGAGGACTGGGAGCCCTTCAGTAAGTTaGTGGCAATTGAGGGGCAAA +
Preference number: 3 (lower is better)
Translates to: NIVGLGIQCNQFTSKRTGSPSVS*WQLRGK
Trigger: TTTGCCCCTCAATTGCCACAAACTTACTGAAGGGCT...CCCAGTCCTCTTAGAAGTGAACTGATTGCACTGGATCCCTAAACCCACAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR-3UTR CAA 90 bp GAACAAAAGCTAAAATATACAGTGGCCATGAAGCAGGCACCACTTAGAAACCTCGCAAAGCTGCCACGCTaGCACAAACTCAGGGATGTT +
Preference number: 3 (lower is better)
Translates to: EQKLKYTVAMKQAPLRNLAKLPR*HKLRDV
Trigger: AACATCCCTGAGTTTGTGCAAGCGTGGCAGCTTTGC...GAGGTTTCTAAGTGGTGCCTGCTTCATGGCCACTGTATATTTTAGCTTTTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572810.1
3UTR GCA 72 bp ACATGTGTCCTCAACATTGTGGGTTTAGGGATCCAGTaGAATCAGTTCACTTCTAAGAGGACTGGGGTTGAG +
Preference number: 3 (lower is better)
Translates to: TCVLNIVGLGIQ*NQFTSKRTGVE
Trigger: CTCAACCCCAGTCCTCTTAGAAGTGAACTGATTGCACTGGATCCCTAAACCCACAATGTTGAGGACACATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR TCA 72 bp AAGCAGTTCAGATCTGAAAGACTGCTGGCAGAGCCCTaGACTGGACTGAGAACAAACGTTTTTATGAGCCAT +
Preference number: 3 (lower is better)
Translates to: KQFRSERLLAEP*TGLRTNVFMSH
Trigger: ATGGCTCATAAAAACGTTTGTTCTCAGTCCAGTTCAGGGCTCTGCCAGCAGTCTTTCAGATCTGAACTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR GCA 72 bp TCAGCCAAATCTACTCATCTGATCAGGATGCCCTCTTaGCTGGACAATGTCAGAGGAACAAGGAAAACAACT +
Preference number: 3 (lower is better)
Translates to: SAKSTHLIRMPS*LDNVRGTRKTT
Trigger: AGTTGTTTTCCTTGTTCCTCTGACATTGTCCAGGCAAGAGGGCATCCTGATCAGATGAGTAGATTTGGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR GCA 72 bp CGTTTTTATGAGCCATCATCATCCACCTCCACAAAGTaGCTGCCTTACTCTAGGGTTTTTCTCAGCCAAATC +
Preference number: 3 (lower is better)
Translates to: RFYEPSSSTSTK*LPYSRVFLSQI
Trigger: GATTTGGCTGAGAAAAACCCTAGAGTAAGGCAGGCACTTTGTGGAGGTGGATGATGATGGCTCATAAAAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR TCA 72 bp TTTCGGCATGGTATCCCACCTAGCAAAAGCCCTAGGTaGATACATGAGGTTCAGACCAGAAGCTTTCAAATT +
Preference number: 3 (lower is better)
Translates to: FRHGIPPSKSPR*IHEVQTRSFQI
Trigger: AATTTGAAAGCTTCTGGTCTGAACCTCATGTATTCACCTAGGGCTTTTGCTAGGTGGGATACCATGCCGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR TCA 72 bp GAATGTACCTTTCTGGGCTATGCAAGCCTCATGCACTaGCTACACAGGGCCACATGGGTAAATATATATGTA +
Preference number: 3 (lower is better)
Translates to: ECTFLGYASLMH*LHRATWVNIYV
Trigger: TACATATATATTTACCCATGTGGCCCTGTGTAGTCAGTGCATGAGGCTTGCATAGCCCAGAAAGGTACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR GCA 72 bp GTGAATTCACCTTTGATCCCACTTACTGCTCTACTCTaGCAGGAGCCAGTTTATATGCGTGAGAATGAATGT +
Preference number: 3 (lower is better)
Translates to: VNSPLIPLTALL*QEPVYMRENEC
Trigger: ACATTCATTCTCACGCATATAAACTGGCTCCTGGCAGAGTAGAGCAGTAAGTGGGATCAAAGGTGAATTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR TCA 72 bp GTGTGTCCATCATATGCATGGTTCAAAAATAAGACATaGGACAGCACATACTTCAGAGTGAGTCCCACTCTC +
Preference number: 3 (lower is better)
Translates to: VCPSYAWFKNKT*DSTYFRVSPTL
Trigger: GAGAGTGGGACTCACTCTGAAGTATGTGCTGTCTCATGTCTTATTTTTGAACCATGCATATGATGGACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
3UTR-3UTR CAA 90 bp AAAGTCCCTGCTAACTTGGCTCTCACTGATGCCAGAAGGACAGCATTTAATTTTTATGCGCCTTTCTACTaGTCAGAAATAAAACCCATT +
Preference number: 3 (lower is better)
Translates to: KVPANLALTDARRTAFNFYAPFY*SEIKPI
Trigger: AATGGGTTTTATTTCTGACAAGTAGAAAGGCGCATA...AAAATTAAATGCTGTCCTTCTGGCATCAGTGAGAGCCAAGTTAGCAGGGACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572810.1
3UTR TCA 72 bp CCCTCATCCATCTATTCAGTCGCCTTTATATCTTCTTaGTCCGAAGTACTAGAGATGTCATCATCTGTTTGT +
Preference number: 3 (lower is better)
Translates to: PSSIYSVAFISS*SEVLEMSSSVC
Trigger: ACAAACAGATGATGACATCTCTAGTACTTCGGATCAAGAAGATATAAAGGCGACTGAATAGATGGATGAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572944.1
3UTR GCA 72 bp TTGGATGAACATGTATCTACTTGCGTGAGGATTCTATaGAAAGTTTTCACTCCCTCATCCATCTATTCAGTC +
Preference number: 3 (lower is better)
Translates to: LDEHVSTCVRIL*KVFTPSSIYSV
Trigger: GACTGAATAGATGGATGAGGGAGTGAAAACTTTGCATAGAATCCTCACGCAAGTAGATACATGTTCATCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572944.1
3UTR-3UTR CAA 90 bp CTTTATATCTTCTTGATCCGAAGTACTAGAGATGTCATCATCTGTTTGTTCTCCCAGCTTAGAATTGGATaGGGACAAATTAGCCTGTTA +
Preference number: 3 (lower is better)
Translates to: LYIFLIRSTRDVIICLFSQLRIG*GQISLL
Trigger: TAACAGGCTAATTTGTCCCAATCCAATTCTAAGCTG...GGAGAACAAACAGATGATGACATCTCTAGTACTTCGGATCAAGAAGATATAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572944.1
3UTR-3UTR CAA 90 bp TTTACTATTCTCCTTTTGGGGGTTCCTAGAAATCAATACATACACTTGGTTTGGATCAACAGCTTAGAATaGGATTGGGACAAATTAGCC +
Preference number: 3 (lower is better)
Translates to: FTILLLGVPRNQYIHLVWINSLE*DWDKLA
Trigger: GGCTAATTTGTCCCAATCCAATTCTAAGCTGTTGAT...CCAAACCAAGTGTATGTATTGATTTCTAGGAACCCCCAAAAGGAGAATAGTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572944.1
3UTR TCA 72 bp TTAATCAAGGTCACTTATCTAAGATTCTACATGTCCTaGAAGACCAAGCGTCAAAAGGAATATTCCTTTCAG +
Preference number: 3 (lower is better)
Translates to: LIKVTYLRFYMS*KTKRQKEYSFQ
Trigger: CTGAAAGGAATATTCCTTTTGACGCTTGGTCTTTCAGGACATGTAGAATCTTAGATAAGTGACCTTGATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572810.1
3UTR GCA 72 bp TTTCTATTAATACTTTTGGATGAACATGTATCTACTTaGGTGAGGATTCTATGCAAAGTTTTCACTCCCTCA +
Preference number: 3 (lower is better)
Translates to: FLLILLDEHVST*VRILCKVFTPS
Trigger: TGAGGGAGTGAAAACTTTGCATAGAATCCTCACGCAAGTAGATACATGTTCATCCAAAAGTATTAATAGAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR GCA 90 bp CCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTCAACAGCAGCGTCCCTGCGGTGCAGCTaGCGGCGCGACCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PLGQPTCGSRPLGWSTAASLRCS*RRDRWR
Trigger: CCTCCAGCGGTCGCGCCGGCAGCTGCACCGCAGGGA...CGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp AGGCTGGATGCCCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTAGTAGGTGGGCTGGCTaGACAGGTCCGTGTCGCGCC +
Preference number: 4 (lower is better)
Translates to: RLDALWVSRPVGHDPWAGSRWAG*TGPCRA
Trigger: GGCGCGACACGGACCTGTTCAGCCAGCCCACCTACT...ACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp TCTTTGGCCCAGGCCCCACTGCAGTGGCACTATCTCGGCTCGCTGCAAGCTCCGTGCACAGGGGCACGTTaGCCCGGATCCAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SLAQAPLQWHYLGSLQAPCTGAR*PGSSGG
Trigger: CCCACCACTGGATCCGGGGCAACGTGCCCCTGTGCA...CGGAGCTTGCAGCGAGCCGAGATAGTGCCACTGCAGTGGGGCCTGGGCCAAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp GGTGGGCAGGGGAAAGTGCAAGAGGCCAGCTGGCTGAGCAAGTGGAGTCATCACTGCGGAAGATGTCCCTaGGGTGCAGCTGCCGGCGCG +
Preference number: 4 (lower is better)
Translates to: GGQGKVQEASWLSKWSHHCGRCP*GAAAGA
Trigger: CGCGCCGGCAGCTGCACCGCAGGGACATCTTCCGCA...GTGATGACTCCACTTGCTCAGCCAGCTGGCCTCTTGCACTTTCCCCTGCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp CCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTCAACAGCAGCGGTGTCGCGCCACCCGTaGTTGCTCTTGCGGAAGATG +
Preference number: 4 (lower is better)
Translates to: PLGQPTCGSRPLGWSTAAVSRHP*LLLRKM
Trigger: CATCTTCCGCAAGAGCAAGCACGGGTGGCGCGACAC...CGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp CCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTCAACAGCAGCGGCAAGCCTCATGCACTaGCTACACAGGGCCACATGG +
Preference number: 4 (lower is better)
Translates to: PLGQPTCGSRPLGWSTAAASLMH*LHRATW
Trigger: CCATGTGGCCCTGTGTAGTCAGTGCATGAGGCTTGC...CGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp AGGCTGGATGCCCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTTCCCTTCCCATAGTCTaGAGCCACCGCCCCAGTATC +
Preference number: 4 (lower is better)
Translates to: RLDALWVSRPVGHDPWAGSLPIV*SHRPSI
Trigger: GATACTGGGGCGGTGGCTGCAGACTATGGGAAGGGA...ACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR TCA 90 bp AGGCTGGATGCCCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTTCTTGTGAGTTATGGTaGCAGTGCAGGGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: RLDALWVSRPVGHDPWAGSCELW*QCRALG
Trigger: CCCAAGGGCCCTGCACTGTCACCATAACTCACAAGA...ACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR TCA 90 bp AGGCTGGATGCCCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTCACTGCACTAACTCCTaGAGCAACTCCTTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: RLDALWVSRPVGHDPWAGHCTNS*SNSLSP
Trigger: GGGGGACAAGGAGTTGCTTCAGGAGTTAGTGCAGTG...ACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp CTGGCTGAGGAGTGGAGGCTGGATGCATCGTCTCAGCAAATGACTACTGCAAAGTCCCTGCGGTGCAGCTaGCGGCGCGACCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LAEEWRLDASSQQMTTAKSLRCS*RRDRWR
Trigger: CCTCCAGCGGTCGCGCCGGCAGCTGCACCGCAGGGA...CTTTGCAGTAGTCATTTGCTGAGACGATGCATCCAGCCTCCACTCCTCAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR GCA 90 bp GGTGGGCAGGGGAAAGTGCAAGAGGCCAGCTGGCTGAGCAAGTGGAGTCATCACTCGCAGAAGGCGCCCTaGAGAATGTGCTGCGCGCAC +
Preference number: 4 (lower is better)
Translates to: GGQGKVQEASWLSKWSHHSQKAP*RMCCAH
Trigger: GTGCGCGCAGCACATTCTGCAGGGCGCCTTCTGCGA...GTGATGACTCCACTTGCTCAGCCAGCTGGCCTCTTGCACTTTCCCCTGCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp AGGCTGGATGCCCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTTTGCCCAGGCTGGAGTaGAGTCATGTGATCTCCGCT +
Preference number: 4 (lower is better)
Translates to: RLDALWVSRPVGHDPWAGLPRLE*SHVISA
Trigger: AGCGGAGATCACATGACTGCACTCCAGCCTGGGCAA...ACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp GGTGGGCAGGGGAAAGTGCAAGAGGCCAGCTGGCTGAGCAAGTGGAGTCATCACCCTCCCTGCAAGCTCTaGCTCCCGGGTTCACGCCAT +
Preference number: 4 (lower is better)
Translates to: GGQGKVQEASWLSKWSHHPPCKL*LPGSRH
Trigger: ATGGCGTGAACCCGGGAGGCAGAGCTTGCAGGGAGG...GTGATGACTCCACTTGCTCAGCCAGCTGGCCTCTTGCACTTTCCCCTGCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp AGAAGGCAGGCGCCTCCATGGCTCACTGCCCCTTGGAGGCGCACTGCACTAACTACTATCTCGGCTCGCTaGAAGCTCCGCCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: RRQAPPWLTAPWRRTALTTISAR*KLRLPA
Trigger: TGCAGGGAGGCGGAGCTTGCAGCGAGCCGAGATAGT...AGTTAGTGCAGTGCGCCTCCAAGGGGCAGTGAGCCATGGAGGCGCCTGCCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp GGTGGGCAGGGGAAAGTGCAAGAGGCCAGCTGGCTGAGCAAGTGGAGTCATCACTGGCCCAGGCCCCACTaGAGTGGCACTATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: GGQGKVQEASWLSKWSHHWPRPH*SGTISA
Trigger: AGCCGAGATAGTGCCACTGCAGTGGGGCCTGGGCCA...GTGATGACTCCACTTGCTCAGCCAGCTGGCCTCTTGCACTTTCCCCTGCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp AGAAGGCAGGCGCCTCCATGGCTCACTGCCCCTTGGAGGCGCACTGCACTAACTTCGCAAAGCTTGGGTTaGCAGCCACACTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RRQAPPWLTAPWRRTALTSQSLG*QPHCCL
Trigger: CAAGCAGCAGTGTGGCTGTCAACCCAAGCTTTGCGA...AGTTAGTGCAGTGCGCCTCCAAGGGGCAGTGAGCCATGGAGGCGCCTGCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp AGAAGGCAGGCGCCTCCATGGCTCACTGCCCCTTGGAGGCGCACTGCACTAACTTGGAGTGCAGTCATGTaGTCTCCGCTCACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: RRQAPPWLTAPWRRTALTWSAVM*SPLTAS
Trigger: GCTTGCAGTGAGCGGAGATCACATGACTGCACTCCA...AGTTAGTGCAGTGCGCCTCCAAGGGGCAGTGAGCCATGGAGGCGCCTGCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp CCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTCAACAGCAGCGCCAAATCTACTCATCTaGTCAGGATGCCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: PLGQPTCGSRPLGWSTAAPNLLI*SGCPLA
Trigger: GGCAAGAGGGCATCCTGATCAGATGAGTAGATTTGG...CGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp CCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTCAACAGCAGCGATCAGGATGCCCTCTTaGCTGGACAATGTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: PLGQPTCGSRPLGWSTAAIRMPS*LDNVRG
Trigger: TCCTCTGACATTGTCCAGGCAAGAGGGCATCCTGAT...CGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp CCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTCAACAGCAGCGTTTGATCCCACTTACTaGTCTACTCTGCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: PLGQPTCGSRPLGWSTAAFDPTY*STLPGA
Trigger: GGCTCCTGGCAGAGTAGAGCAGTAAGTGGGATCAAA...CGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp TCGTCTCAGCAAATGACTACTGCAAAGCTGCCACGCTTGCACAAACTCAGGGATCGGGCCAGCAGGCCTTaGCCGCCTCGCGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SSQQMTTAKLPRLHKLRDRASRP*PPRAGG
Trigger: TCCTCCTGCGCGAGGCGGCCAAGGCCTGCTGGCCCG...ATCCCTGAGTTTGTGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGAGACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR TCA 90 bp CTGGCTGAGGAGTGGAGGCTGGATGCATCGTCTCAGCAAATGACTACTGCAAAGAGTAGGTGGGCTGGCTaGACAGGTCCGTGTCGCGCC +
Preference number: 4 (lower is better)
Translates to: LAEEWRLDASSQQMTTAKSRWAG*TGPCRA
Trigger: GGCGCGACACGGACCTGTTCAGCCAGCCCACCTACT...CTTTGCAGTAGTCATTTGCTGAGACGATGCATCCAGCCTCCACTCCTCAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR TCA 90 bp TCGTCTCAGCAAATGACTACTGCAAAGCTGCCACGCTTGCACAAACTCAGGGATGCTTGTCGGCCTTCCTaGGGCAGCCCTCGTCCACGC +
Preference number: 4 (lower is better)
Translates to: SSQQMTTAKLPRLHKLRDACRPS*GSPRPR
Trigger: GCGTGGACGAGGGCTGCCTCAGGAAGGCCGACAAGC...ATCCCTGAGTTTGTGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGAGACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR TCA 90 bp CCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTCAACAGCAGCGCAGAGATTAATGTCATaGAAGACCACAAAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PLGQPTCGSRPLGWSTAAQRLMS*KTTKPG
Trigger: CCCAGGCTTTGTGGTCTTTCATGACATTAATCTCTG...CGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR TCA 90 bp GGTGGGCAGGGGAAAGTGCAAGAGGCCAGCTGGCTGAGCAAGTGGAGTCATCACGGTCTGGGCCTGAGGTaGGGCAAACTTAGGTTTATG +
Preference number: 4 (lower is better)
Translates to: GGQGKVQEASWLSKWSHHGLGLR*GKLRFM
Trigger: CATAAACCTAAGTTTGCCTCACCTCAGGCCCAGACC...GTGATGACTCCACTTGCTCAGCCAGCTGGCCTCTTGCACTTTCCCCTGCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp CTGGCTGAGGAGTGGAGGCTGGATGCATCGTCTCAGCAAATGACTACTGCAAAGCGCGCCACCCGTGCTTaGTCTTGCGGAAGATGTCCC +
Preference number: 4 (lower is better)
Translates to: LAEEWRLDASSQQMTTAKRATRA*SCGRCP
Trigger: GGGACATCTTCCGCAAGAGCAAGCACGGGTGGCGCG...CTTTGCAGTAGTCATTTGCTGAGACGATGCATCCAGCCTCCACTCCTCAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR GCA 90 bp GGTGGGCAGGGGAAAGTGCAAGAGGCCAGCTGGCTGAGCAAGTGGAGTCATCACAAACCATACAGTAACTaGACAGGGGCACGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: GGQGKVQEASWLSKWSHHKPYSN*TGARCP
Trigger: GGGGCAACGTGCCCCTGTGCAGTTACTGTATGGTTT...GTGATGACTCCACTTGCTCAGCCAGCTGGCCTCTTGCACTTTCCCCTGCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp AGAAGGCAGGCGCCTCCATGGCTCACTGCCCCTTGGAGGCGCACTGCACTAACTCTTCATGTCATCAACTaGATCCAGGACCCACCCTAC +
Preference number: 4 (lower is better)
Translates to: RRQAPPWLTAPWRRTALTLHVIN*IQDPPY
Trigger: GTAGGGTGGGTCCTGGATGCAGTTGATGACATGAAG...AGTTAGTGCAGTGCGCCTCCAAGGGGCAGTGAGCCATGGAGGCGCCTGCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp AGGCTGGATGCCCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTAGAAAACAGAGATGGTaGCTTCTCACGATGAGCATG +
Preference number: 4 (lower is better)
Translates to: RLDALWVSRPVGHDPWAGRKQRW*LLTMSM
Trigger: CATGCTCATCGTGAGAAGGCACCATCTCTGTTTTCT...ACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp CCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTCAACAGCAGCGTACCCTCACTGTATGTaGCTGTCCTATTCGAAAAGG +
Preference number: 4 (lower is better)
Translates to: PLGQPTCGSRPLGWSTAAYPHCM*LSYSKR
Trigger: CCTTTTCGAATAGGACAGGCACATACAGTGAGGGTA...CGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572944.1
CDS-3UTR CCA 90 bp TCGTCTCAGCAAATGACTACTGCAAAGCTGCCACGCTTGCACAAACTCAGGGATCCCCGGATCCAGTGGTaGGGCATGGCGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: SSQQMTTAKLPRLHKLRDPRIQW*GMASRT
Trigger: GGTCCTGGACGCCATGCCCCACCACTGGATCCGGGG...ATCCCTGAGTTTGTGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGAGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CCA 90 bp TCTTTGGCCCAGGCCCCACTGCAGTGGCACTATCTCGGCTCGCTGCAAGCTCCGTGTAATCGCAAAGCTTaGGTTGACAGCCACACTGCT +
Preference number: 4 (lower is better)
Translates to: SLAQAPLQWHYLGSLQAPCNRKA*VDSHTA
Trigger: AGCAGTGTGGCTGTCAACCCAAGCTTTGCGATTACA...CGGAGCTTGCAGCGAGCCGAGATAGTGCCACTGCAGTGGGGCCTGGGCCAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp CCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTCAACAGCAGCGCCCAACCCAATGTATTaGATAGATCGTTGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: PLGQPTCGSRPLGWSTAAPNPMY*IDRCLF
Trigger: GAACAGGCAACGATCTATCCAATACATTGGGTTGGG...CGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp AGGCTGGATGCCCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTCCACCCACACCTTGTTaGAGATATAATGTGTCCATC +
Preference number: 4 (lower is better)
Translates to: RLDALWVSRPVGHDPWAGPPTPC*RYNVSI
Trigger: GATGGACACATTATATCTCCAACAAGGTGTGGGTGG...ACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp TCGTCTCAGCAAATGACTACTGCAAAGCTGCCACGCTTGCACAAACTCAGGGATGCGCCCTGCAGAATGTaGTGCGCGCACACGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSQQMTTAKLPRLHKLRDAPCRM*CAHTQQ
Trigger: CTGCTGCGTGTGCGCGCAGCACATTCTGCAGGGCGC...ATCCCTGAGTTTGTGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGAGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR GCA 90 bp TCGTCTCAGCAAATGACTACTGCAAAGCTGCCACGCTTGCACAAACTCAGGGATTGCACAGGGGCACGTTaGCCCGGATCCAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSQQMTTAKLPRLHKLRDCTGAR*PGSSGG
Trigger: CCCACCACTGGATCCGGGGCAACGTGCCCCTGTGCA...ATCCCTGAGTTTGTGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGAGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CCA 90 bp TCGTCTCAGCAAATGACTACTGCAAAGCTGCCACGCTTGCACAAACTCAGGGATTTGCCCCGGATCCAGTaGTGGGGCATGGCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SSQQMTTAKLPRLHKLRDLPRIQ*WGMASR
Trigger: CCTGGACGCCATGCCCCACCACTGGATCCGGGGCAA...ATCCCTGAGTTTGTGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGAGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CCA 90 bp AGAAGGCAGGCGCCTCCATGGCTCACTGCCCCTTGGAGGCGCACTGCACTAACTCCTGCATTGGCATCATaGAGCACTTCAAAATCAGCC +
Preference number: 4 (lower is better)
Translates to: RRQAPPWLTAPWRRTALTPALAS*STSKSA
Trigger: GGCTGATTTTGAAGTGCTCCATGATGCCAATGCAGG...AGTTAGTGCAGTGCGCCTCCAAGGGGCAGTGAGCCATGGAGGCGCCTGCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp GAACAAAAGCTAAAATATACAGTGGCCATGAAGCAGGCACCACTTAGAAACCTCGGCCGCCAGCAGGGATaGAGCCGGGCGGGGGAAACG +
Preference number: 4 (lower is better)
Translates to: EQKLKYTVAMKQAPLRNLGRQQG*SRAGET
Trigger: CGTTTCCCCCGCCCGGCTTCATCCCTGCTGGCGGCC...GAGGTTTCTAAGTGGTGCCTGCTTCATGGCCACTGTATATTTTAGCTTTTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR TCA 90 bp AGGCTGGATGCCCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTAACAAGTACTCGAGCTaGATAATATGGGAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: RLDALWVSRPVGHDPWAGNKYSS*IIWEKS
Trigger: ACTCTTCTCCCATATTATTCAGCTCGAGTACTTGTT...ACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp TCGTCTCAGCAAATGACTACTGCAAAGCTGCCACGCTTGCACAAACTCAGGGATTCGCAGAAGGCGCCCTaGAGAATGTGCTGCGCGCAC +
Preference number: 4 (lower is better)
Translates to: SSQQMTTAKLPRLHKLRDSQKAP*RMCCAH
Trigger: GTGCGCGCAGCACATTCTGCAGGGCGCCTTCTGCGA...ATCCCTGAGTTTGTGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGAGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR GCA 90 bp TCTTTGGCCCAGGCCCCACTGCAGTGGCACTATCTCGGCTCGCTGCAAGCTCCGTGCGTGAGGATTCTATaGAAAGTTTTCACTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SLAQAPLQWHYLGSLQAPCVRIL*KVFTPS
Trigger: TGAGGGAGTGAAAACTTTGCATAGAATCCTCACGCA...CGGAGCTTGCAGCGAGCCGAGATAGTGCCACTGCAGTGGGGCCTGGGCCAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp AGAAGGCAGGCGCCTCCATGGCTCACTGCCCCTTGGAGGCGCACTGCACTAACTATACACAAGTGTGGCTaGATTGACTGCAGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: RRQAPPWLTAPWRRTALTIHKCG*IDCSEK
Trigger: CTTCTCACTGCAGTCAATGCAGCCACACTTGTGTAT...AGTTAGTGCAGTGCGCCTCCAAGGGGCAGTGAGCCATGGAGGCGCCTGCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp GGTGGGCAGGGGAAAGTGCAAGAGGCCAGCTGGCTGAGCAAGTGGAGTCATCACTACCTTTCTGGGCTATaGAAGCCTCATGCACTGACT +
Preference number: 4 (lower is better)
Translates to: GGQGKVQEASWLSKWSHHYLSGL*KPHALT
Trigger: AGTCAGTGCATGAGGCTTGCATAGCCCAGAAAGGTA...GTGATGACTCCACTTGCTCAGCCAGCTGGCCTCTTGCACTTTCCCCTGCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp AGAAGGCAGGCGCCTCCATGGCTCACTGCCCCTTGGAGGCGCACTGCACTAACTGGACTCGAGCTAGGCTaGTCTAAACTTGTACAAACA +
Preference number: 4 (lower is better)
Translates to: RRQAPPWLTAPWRRTALTGLELG*SKLVQT
Trigger: TGTTTGTACAAGTTTAGAGCAGCCTAGCTCGAGTCC...AGTTAGTGCAGTGCGCCTCCAAGGGGCAGTGAGCCATGGAGGCGCCTGCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp CTGGCTGAGGAGTGGAGGCTGGATGCATCGTCTCAGCAAATGACTACTGCAAAGTCCCACGGCGCATTCTaGGACAGTGAGTGTCCACGA +
Preference number: 4 (lower is better)
Translates to: LAEEWRLDASSQQMTTAKSHGAF*DSECPR
Trigger: TCGTGGACACTCACTGTCCCAGAATGCGCCGTGGGA...CTTTGCAGTAGTCATTTGCTGAGACGATGCATCCAGCCTCCACTCCTCAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR TCA 90 bp TTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCGCTTGTCGGCCTTCCTaGGGCAGCCCTCGTCCACGC +
Preference number: 4 (lower is better)
Translates to: FPPTPCWRYNVSIHCVSIACRPS*GSPRPR
Trigger: GCGTGGACGAGGGCTGCCTCAGGAAGGCCGACAAGC...GATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp TCGTCTCAGCAAATGACTACTGCAAAGCTGCCACGCTTGCACAAACTCAGGGATGTCCACAAGATCAGGTaGCCGTCCGCAAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: SSQQMTTAKLPRLHKLRDVHKIR*PSANRP
Trigger: GGGCCTGTTTGCGGACGGGCACCTGATCTTGTGGAC...ATCCCTGAGTTTGTGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGAGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR GCA 90 bp GACATGAGACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAGATGTCCCTGCGGTaGAGCTGCCGGCGCGACCGC +
Preference number: 4 (lower is better)
Translates to: DMRQHILQSESHSQNSHNKMSLR*SCRRDR
Trigger: GCGGTCGCGCCGGCAGCTGCACCGCAGGGACATCTT...GTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTCTCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp TCGTCTCAGCAAATGACTACTGCAAAGCTGCCACGCTTGCACAAACTCAGGGATTCCAGTGGTGGGGCATaGCGTCCAGGACCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: SSQQMTTAKLPRLHKLRDSSGGA*RPGPWC
Trigger: ACACCAAGGTCCTGGACGCCATGCCCCACCACTGGA...ATCCCTGAGTTTGTGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGAGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CCA 90 bp TTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCCCCCGGATCCAGTGGTaGGGCATGGCGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: FPPTPCWRYNVSIHCVSIPRIQW*GMASRT
Trigger: GGTCCTGGACGCCATGCCCCACCACTGGATCCGGGG...GATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp AGGCTGGATGCCCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTGTTACATCAAAAACCTaGACTGGATTCAACAAGATC +
Preference number: 4 (lower is better)
Translates to: RLDALWVSRPVGHDPWAGVTSKT*TGFNKI
Trigger: GATCTTGTTGAATCCAGTCCAGGTTTTTGATGTAAC...ACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp AACATTGTGGGTTTAGGGATCCAGTGCAATCAGTTCACTTCTAAGAGGACTGGGGGGTCAGCCGACCTGTaGGTCACGACCCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: NIVGLGIQCNQFTSKRTGGSADL*VTTLGL
Trigger: CAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCC...CCCAGTCCTCTTAGAAGTGAACTGATTGCACTGGATCCCTAAACCCACAATGTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp CCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTCAACAGCAGCGGAACGTTTTATCTCATaGATCTTGAGCCATGTTTCT +
Preference number: 4 (lower is better)
Translates to: PLGQPTCGSRPLGWSTAAERFIS*ILSHVS
Trigger: AGAAACATGGCTCAAGATCCATGAGATAAAACGTTC...CGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572944.1
CDS-3UTR TCA 90 bp AGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCTTTCAAGGCCGCCAGCAGGGATaGAGCCGGGCGGGGGAAACG +
Preference number: 4 (lower is better)
Translates to: RRMLTINHAGLTVIISFQGRQQG*SRAGET
Trigger: CGTTTCCCCCGCCCGGCTTCATCCCTGCTGGCGGCC...TTGAAAGGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp AGAAGGCAGGCGCCTCCATGGCTCACTGCCCCTTGGAGGCGCACTGCACTAACTTTATCTACTGAGATCTaGAGCAGCACTCAGTATACA +
Preference number: 4 (lower is better)
Translates to: RRQAPPWLTAPWRRTALTLSTEI*SSTQYT
Trigger: TGTATACTGAGTGCTGCTTCAGATCTCAGTAGATAA...AGTTAGTGCAGTGCGCCTCCAAGGGGCAGTGAGCCATGGAGGCGCCTGCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp GAACAAAAGCTAAAATATACAGTGGCCATGAAGCAGGCACCACTTAGAAACCTCTGCGGAAGATGTCCCTaGGGTGCAGCTGCCGGCGCG +
Preference number: 4 (lower is better)
Translates to: EQKLKYTVAMKQAPLRNLCGRCP*GAAAGA
Trigger: CGCGCCGGCAGCTGCACCGCAGGGACATCTTCCGCA...GAGGTTTCTAAGTGGTGCCTGCTTCATGGCCACTGTATATTTTAGCTTTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CCA 90 bp CAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCACTCTCATGTAAGGATACCTCGCGCGGGTaGAGGCGCGGCTCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: QSESHSQNSHNKFSLSCKDTSRG*RRGSGP
Trigger: TGGCCCGGAGCCGCGCCTCCACCCGCGCGAGGTATC...CTTACATGAGAGTGAAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp CACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATCCCCGGATCCAGTGGTaGGGCATGGCGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: HPHLVGDIMCPSIVCPSYPRIQW*GMASRT
Trigger: GGTCCTGGACGCCATGCCCCACCACTGGATCCGGGG...ATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp TGCTGCAGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCACAGTGCAGGGCCCTTaGGCCCAAGGCTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: CCRRMLTINHAGLTVIISTVQGP*AQGSPS
Trigger: GGATGGGGAGCCTTGGGCCCAAGGGCCCTGCACTGT...GGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR CCA 90 bp TGCTGCAGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCAGGCAGGCGCCTCCATaGCTCACTGCCCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: CCRRMLTINHAGLTVIISRQAPP*LTAPWR
Trigger: CCTCCAAGGGGCAGTGAGCCATGGAGGCGCCTGCCT...GGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp CTGGCTGAGGAGTGGAGGCTGGATGCATCGTCTCAGCAAATGACTACTGCAAAGCTGAGGAGTGGAGGCTaGATGCATCGTCTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: LAEEWRLDASSQQMTTAKLRSGG*MHRLSK
Trigger: TTTGCTGAGACGATGCATCCAGCCTCCACTCCTCAG...CTTTGCAGTAGTCATTTGCTGAGACGATGCATCCAGCCTCCACTCCTCAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR TCA 90 bp AGAAGGCAGGCGCCTCCATGGCTCACTGCCCCTTGGAGGCGCACTGCACTAACTCAATCCCAAGTGCTCTaGATCTTATTTCTTACCAAT +
Preference number: 4 (lower is better)
Translates to: RRQAPPWLTAPWRRTALTQSQVL*ILFLTN
Trigger: ATTGGTAAGAAATAAGATTCAGAGCACTTGGGATTG...AGTTAGTGCAGTGCGCCTCCAAGGGGCAGTGAGCCATGGAGGCGCCTGCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp CTGGCTGAGGAGTGGAGGCTGGATGCATCGTCTCAGCAAATGACTACTGCAAAGCATCGTCTCAGCAAATaGCTACTGCAAAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LAEEWRLDASSQQMTTAKHRLSK*LLQSCH
Trigger: GTGGCAGCTTTGCAGTAGTCATTTGCTGAGACGATG...CTTTGCAGTAGTCATTTGCTGAGACGATGCATCCAGCCTCCACTCCTCAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR GCA 90 bp AACATTGTGGGTTTAGGGATCCAGTGCAATCAGTTCACTTCTAAGAGGACTGGGAAACACCAGGCTGGATaGCCTCTGGGTCAGCCGACC +
Preference number: 4 (lower is better)
Translates to: NIVGLGIQCNQFTSKRTGKHQAG*PLGQPT
Trigger: GGTCGGCTGACCCAGAGGGCATCCAGCCTGGTGTTT...CCCAGTCCTCTTAGAAGTGAACTGATTGCACTGGATCCCTAAACCCACAATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGCGGGCCAGCAGGCCTTaGCCGCCTCGCGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVRASRP*PPRAGG
Trigger: TCCTCCTGCGCGAGGCGGCCAAGGCCTGCTGGCCCG...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp AAAGTCCCTGCTAACTTGGCTCTCACTGATGCCAGAAGGACAGCATTTAATTTTTGCCGGCGCGACCGCTaGAGGCTACACCAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: KVPANLALTDARRTAFNFCRRDR*RLHQKV
Trigger: CACCTTCTGGTGTAGCCTCCAGCGGTCGCGCCGGCA...AAAATTAAATGCTGTCCTTCTGGCATCAGTGAGAGCCAAGTTAGCAGGGACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CCA 90 bp GACATGAGACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAGGCTGGATGCCCTCTaGGTCAGCCGACCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: DMRQHILQSESHSQNSHNRLDAL*VSRPVG
Trigger: ACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCT...GTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTCTCATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR TCA 90 bp AATTTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGCTTGTCGGCCTTCCTaGGGCAGCCCTCGTCCACGC +
Preference number: 4 (lower is better)
Translates to: NLIFPPTPCWRYNVSIHCACRPS*GSPRPR
Trigger: GCGTGGACGAGGGCTGCCTCAGGAAGGCCGACAAGC...ACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR TCA 90 bp TCGTCTCAGCAAATGACTACTGCAAAGCTGCCACGCTTGCACAAACTCAGGGATCGCATTCTGGGACAGTaGGTGTCCACGAAGACCATA +
Preference number: 4 (lower is better)
Translates to: SSQQMTTAKLPRLHKLRDRILGQ*VSTKTI
Trigger: TATGGTCTTCGTGGACACTCACTGTCCCAGAATGCG...ATCCCTGAGTTTGTGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGAGACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR GCA 90 bp GACATGAGACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACGTCCACAAGATCAGGTaGCCGTCCGCAAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: DMRQHILQSESHSQNSHNVHKIR*PSANRP
Trigger: GGGCCTGTTTGCGGACGGGCACCTGATCTTGTGGAC...GTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTCTCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp TTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGGGAGGAGAACGACGCTaGGCCGCCAGCAGGGATGAA +
Preference number: 4 (lower is better)
Translates to: LIFPPTPCWRYNVSIHCVGGERR*AASRDE
Trigger: TTCATCCCTGCTGGCGGCCCAGCGTCGTTCTCCTCC...CACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp GAACAAAAGCTAAAATATACAGTGGCCATGAAGCAGGCACCACTTAGAAACCTCGGAGGAGAACGACGCTaGGCCGCCAGCAGGGATGAA +
Preference number: 4 (lower is better)
Translates to: EQKLKYTVAMKQAPLRNLGGERR*AASRDE
Trigger: TTCATCCCTGCTGGCGGCCCAGCGTCGTTCTCCTCC...GAGGTTTCTAAGTGGTGCCTGCTTCATGGCCACTGTATATTTTAGCTTTTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CCA 90 bp TGCTGCAGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCTCCAGTGGTGGGGCATaGCGTCCAGGACCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: CCRRMLTINHAGLTVIISSSGGA*RPGPWC
Trigger: ACACCAAGGTCCTGGACGCCATGCCCCACCACTGGA...GGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCTGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp GACATGAGACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACGTGGGTCACGACCCTTaGGCTGGTCAACAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: DMRQHILQSESHSQNSHNVGHDP*AGQQQR
Trigger: TCGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCAC...GTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTCTCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp AAAGTCCCTGCTAACTTGGCTCTCACTGATGCCAGAAGGACAGCATTTAATTTTCCCAAAAGGGCAGGCTaGCTGAGGAGTGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KVPANLALTDARRTAFNFPKRAG*LRSGGW
Trigger: CCAGCCTCCACTCCTCAGCCAGCCTGCCCTTTTGGG...AAAATTAAATGCTGTCCTTCTGGCATCAGTGAGAGCCAAGTTAGCAGGGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CCA 90 bp TCGTCTCAGCAAATGACTACTGCAAAGCTGCCACGCTTGCACAAACTCAGGGATGTGTTAGTCCAGAGCTaGAAATCCTGGAGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: SSQQMTTAKLPRLHKLRDVLVQS*KSWRPV
Trigger: GACTGGCCTCCAGGATTTCCAGCTCTGGACTAACAC...ATCCCTGAGTTTGTGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGAGACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR TCA 90 bp GACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTAGTAGGTGGGCTGGCTaGACAGGTCCGTGTCGCGCC +
Preference number: 4 (lower is better)
Translates to: DSTYFRVSPTLKTVITNFSRWAG*TGPCRA
Trigger: GGCGCGACACGGACCTGTTCAGCCAGCCCACCTACT...AAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR TCA 90 bp TCGTCTCAGCAAATGACTACTGCAAAGCTGCCACGCTTGCACAAACTCAGGGATCTCTACACCACTCTATaGAATCCTGATTCCCACGGC +
Preference number: 4 (lower is better)
Translates to: SSQQMTTAKLPRLHKLRDLYTTL*NPDSHG
Trigger: GCCGTGGGAATCAGGATTTCATAGAGTGGTGTAGAG...ATCCCTGAGTTTGTGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGAGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR GCA 90 bp ACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATGCATGCGCGCCACCCGTGCTTaGTCTTGCGGAAGATGTCCC +
Preference number: 4 (lower is better)
Translates to: TPCWRYNVSIHCVSIICMRATRA*SCGRCP
Trigger: GGGACATCTTCCGCAAGAGCAAGCACGGGTGGCGCG...CATGCATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp GAACAAAAGCTAAAATATACAGTGGCCATGAAGCAGGCACCACTTAGAAACCTCGTGTCGCGCCACCCGTaGTTGCTCTTGCGGAAGATG +
Preference number: 4 (lower is better)
Translates to: EQKLKYTVAMKQAPLRNLVSRHP*LLLRKM
Trigger: CATCTTCCGCAAGAGCAAGCACGGGTGGCGCGACAC...GAGGTTTCTAAGTGGTGCCTGCTTCATGGCCACTGTATATTTTAGCTTTTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR GCA 90 bp CCCAGGAATCATGTGCTCCAGTTTACCGAAGTCTCTACAACTCTTACCTTCGTTTTCCAAGCTGGGCAGTaGTACTCGCTCACCATCCAG +
Preference number: 4 (lower is better)
Translates to: PRNHVLQFTEVSTTLTFVFQAGQ*YSLTIQ
Trigger: CTGGATGGTGAGCGAGTAGCACTGCCCAGCTTGGAA...AACGAAGGTAAGAGTTGTAGAGACTTCGGTAAACTGGAGCACATGATTCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp GACATGAGACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACGGCTCCCCATCCACCTaGATTGGCATCATGGAGCAC +
Preference number: 4 (lower is better)
Translates to: DMRQHILQSESHSQNSHNGSPST*IGIMEH
Trigger: GTGCTCCATGATGCCAATGCAGGTGGATGGGGAGCC...GTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTCTCATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp TTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGAAACACCAGGCTGGATaGCCTCTGGGTCAGCCGACC +
Preference number: 4 (lower is better)
Translates to: LIFPPTPCWRYNVSIHCVKHQAG*PLGQPT
Trigger: GGTCGGCTGACCCAGAGGGCATCCAGCCTGGTGTTT...CACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp TTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCAGTGGTGGGGCATaGCGTCCAGGACCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LIFPPTPCWRYNVSIHCVSSGGA*RPGPWC
Trigger: ACACCAAGGTCCTGGACGCCATGCCCCACCACTGGA...CACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp CAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCACTCTCATGTAAGTTGCCCCGGATCCAGTaGTGGGGCATGGCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QSESHSQNSHNKFSLSCKLPRIQ*WGMASR
Trigger: CCTGGACGCCATGCCCCACCACTGGATCCGGGGCAA...CTTACATGAGAGTGAAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp AATTTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTACAGTGCAGGGCCCTTaGGCCCAAGGCTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: NLIFPPTPCWRYNVSIHCTVQGP*AQGSPS
Trigger: GGATGGGGAGCCTTGGGCCCAAGGGCCCTGCACTGT...ACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR CCA 90 bp CACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCACTCGGGTCAGCCGACCTGTaGGTCACGACCCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: HILQSESHSQNSHNKFSLGSADL*VTTLGL
Trigger: CAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCC...GAGTGAAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp CCCAGGAATCATGTGCTCCAGTTTACCGAAGTCTCTACAACTCTTACCTTCGTTAGAAAAACACCAGGCTaGATGCCCTCTGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: PRNHVLQFTEVSTTLTFVRKTPG*MPSGSA
Trigger: GGCTGACCCAGAGGGCATCCAGCCTGGTGTTTTTCT...AACGAAGGTAAGAGTTGTAGAGACTTCGGTAAACTGGAGCACATGATTCCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp TTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCGCAAGCTCTGCCGCCTaGGTTCGAGCAATTCTCGTG +
Preference number: 4 (lower is better)
Translates to: FPPTPCWRYNVSIHCVSIASSAA*VRAILV
Trigger: CACGAGAATTGCTCGAACCCAGGCGGCAGAGCTTGC...GATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR CAA 72 bp GTTTACCGAAGTCTCTACAACTCTTACCTTCGTTGCTaGCCCAGCTCCTGTAAGCACTTGCAACCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: VYRSLYNSYLRC*PSSCKHLQPVG
Trigger: ACCTACGGGTTGCAAGTGCTTACAGGAGCTGGGCAAGCAACGAAGGTAAGAGTTGTAGAGACTTCGGTAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp TGCTGCAGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCTCTTGTGAGTTATGGTaGCAGTGCAGGGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: CCRRMLTINHAGLTVIISSCELW*QCRALG
Trigger: CCCAAGGGCCCTGCACTGTCACCATAACTCACAAGA...GGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCTGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR TCA 90 bp ACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATGCATGACTCCTGACCTCAGGTaGTACGCCTCCCTTAGCCCC +
Preference number: 4 (lower is better)
Translates to: TPCWRYNVSIHCVSIICMTPDLR*YASLSP
Trigger: GGGGCTAAGGGAGGCGTATCACCTGAGGTCAGGAGT...CATGCATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp AAAGTCCCTGCTAACTTGGCTCTCACTGATGCCAGAAGGACAGCATTTAATTTTACCCGTGCTTGCTCTTaGGGAAGATGTCCCTGCGGT +
Preference number: 4 (lower is better)
Translates to: KVPANLALTDARRTAFNFTRACS*GRCPCG
Trigger: ACCGCAGGGACATCTTCCGCAAGAGCAAGCACGGGT...AAAATTAAATGCTGTCCTTCTGGCATCAGTGAGAGCCAAGTTAGCAGGGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR GCA 90 bp CTGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGCGCCCTGCAGAATGTaGTGCGCGCACACGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LAGLGMLFTKMYTHYTTSAPCRM*CAHTQQ
Trigger: CTGCTGCGTGTGCGCGCAGCACATTCTGCAGGGCGC...ACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGGCGCCCTGCAGAATGTaGTGCGCGCACACGCAGCAG +
Preference number: 4 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVAPCRM*CAHTQQ
Trigger: CTGCTGCGTGTGCGCGCAGCACATTCTGCAGGGCGC...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp CATCTATTCAGTCGCCTTTATATCTTCTTGATCCGAAGTACTAGAGATGTCATCTCGCAGAAGGCGCCCTaGAGAATGTGCTGCGCGCAC +
Preference number: 4 (lower is better)
Translates to: HLFSRLYIFLIRSTRDVISQKAP*RMCCAH
Trigger: GTGCGCGCAGCACATTCTGCAGGGCGCCTTCTGCGA...GATGACATCTCTAGTACTTCGGATCAAGAAGATATAAAGGCGACTGAATAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572944.1
CDS-3UTR GCA 90 bp CTTTATATCTTCTTGATCCGAAGTACTAGAGATGTCATCATCTGTTTGTTCTCCTGCACAGGGGCACGTTaGCCCGGATCCAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LYIFLIRSTRDVIICLFSCTGAR*PGSSGG
Trigger: CCCACCACTGGATCCGGGGCAACGTGCCCCTGTGCA...GGAGAACAAACAGATGATGACATCTCTAGTACTTCGGATCAAGAAGATATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572944.1
CDS-3UTR GCA 90 bp TGCTGCAGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCTTCCAAGCTGGGCAGTaGTACTCGCTCACCATCCAG +
Preference number: 4 (lower is better)
Translates to: CCRRMLTINHAGLTVIISFQAGQ*YSLTIQ
Trigger: CTGGATGGTGAGCGAGTAGCACTGCCCAGCTTGGAA...GGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCTGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp TTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCCTTCCCATAGTCTaGAGCCACCGCCCCAGTATC +
Preference number: 4 (lower is better)
Translates to: LIFPPTPCWRYNVSIHCVSLPIV*SHRPSI
Trigger: GATACTGGGGCGGTGGCTGCAGACTATGGGAAGGGA...CACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGGCCTCCATGGCTCACTaGCCCTTGGAGGCGCACTGC +
Preference number: 4 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVASMAH*PLEAHC
Trigger: GCAGTGCGCCTCCAAGGGGCAGTGAGCCATGGAGGC...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp TTTACTATTCTCCTTTTGGGGGTTCCTAGAAATCAATACATACACTTGGTTTGGTGCCGGCGCGACCGCTaGAGGCTACACCAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: FTILLLGVPRNQYIHLVWCRRDR*RLHQKV
Trigger: CACCTTCTGGTGTAGCCTCCAGCGGTCGCGCCGGCA...CCAAACCAAGTGTATGTATTGATTTCTAGGAACCCCCAAAAGGAGAATAGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGTTGCCCCGGATCCAGTaGTGGGGCATGGCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVLPRIQ*WGMASR
Trigger: CCTGGACGCCATGCCCCACCACTGGATCCGGGGCAA...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp CTGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTACAGTGCAGGGCCCTTaGGCCCAAGGCTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: LAGLGMLFTKMYTHYTTSTVQGP*AQGSPS
Trigger: GGATGGGGAGCCTTGGGCCCAAGGGCCCTGCACTGT...ACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR CCA 90 bp AATTTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTCAGGCCCCACTGCAGTaGCACTATCTCGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: NLIFPPTPCWRYNVSIHCQAPLQ*HYLGSL
Trigger: CAGCGAGCCGAGATAGTGCCACTGCAGTGGGGCCTG...ACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp GAACAAAAGCTAAAATATACAGTGGCCATGAAGCAGGCACCACTTAGAAACCTCAGGCTGGCTGAGGAGTaGAGGCTGGATGCATCGTCT +
Preference number: 4 (lower is better)
Translates to: EQKLKYTVAMKQAPLRNLRLAEE*RLDASS
Trigger: AGACGATGCATCCAGCCTCCACTCCTCAGCCAGCCT...GAGGTTTCTAAGTGGTGCCTGCTTCATGGCCACTGTATATTTTAGCTTTTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CCA 90 bp TCGTCTCAGCAAATGACTACTGCAAAGCTGCCACGCTTGCACAAACTCAGGGATCAGAGCTGGAAATCCTaGAGGCCAGTCCTATTTTAC +
Preference number: 4 (lower is better)
Translates to: SSQQMTTAKLPRLHKLRDQSWKS*RPVLFY
Trigger: GTAAAATAGGACTGGCCTCCAGGATTTCCAGCTCTG...ATCCCTGAGTTTGTGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGAGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR TCA 90 bp AAAGTCCCTGCTAACTTGGCTCTCACTGATGCCAGAAGGACAGCATTTAATTTTTCGCAAAGCTTGGGTTaGCAGCCACACTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KVPANLALTDARRTAFNFSQSLG*QPHCCL
Trigger: CAAGCAGCAGTGTGGCTGTCAACCCAAGCTTTGCGA...AAAATTAAATGCTGTCCTTCTGGCATCAGTGAGAGCCAAGTTAGCAGGGACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR TCA 90 bp CCCAGGAATCATGTGCTCCAGTTTACCGAAGTCTCTACAACTCTTACCTTCGTTGGCGTTTCACCATGTTaGCCAGGCTTGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: PRNHVLQFTEVSTTLTFVGVSPC*PGLSQT
Trigger: AGTTTGAGACAAGCCTGGTCAACATGGTGAAACGCC...AACGAAGGTAAGAGTTGTAGAGACTTCGGTAAACTGGAGCACATGATTCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp TCGTCTCAGCAAATGACTACTGCAAAGCTGCCACGCTTGCACAAACTCAGGGATAATATACAGTGGCCATaGAGCAGGCACCACTTAGAA +
Preference number: 4 (lower is better)
Translates to: SSQQMTTAKLPRLHKLRDNIQWP*SRHHLE
Trigger: TTCTAAGTGGTGCCTGCTTCATGGCCACTGTATATT...ATCCCTGAGTTTGTGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGAGACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR TCA 90 bp TCGTCTCAGCAAATGACTACTGCAAAGCTGCCACGCTTGCACAAACTCAGGGATATAGTACAAAACCTGTaGCCCATCAGTTTTGCGGCT +
Preference number: 4 (lower is better)
Translates to: SSQQMTTAKLPRLHKLRDIVQNL*PISFAA
Trigger: AGCCGCAAAACTGATGGGTCACAGGTTTTGTACTAT...ATCCCTGAGTTTGTGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGAGACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR GCA 90 bp TGCTGCAGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCGCTATGCAAGCCTCATaGACTGACTACACAGGGCCA +
Preference number: 4 (lower is better)
Translates to: CCRRMLTINHAGLTVIISAMQAS*TDYTGP
Trigger: TGGCCCTGTGTAGTCAGTGCATGAGGCTTGCATAGC...GGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCTGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp AACATTGTGGGTTTAGGGATCCAGTGCAATCAGTTCACTTCTAAGAGGACTGGGTCCACCTCCACAAAGTaGCTGCCTTACTCTAGGGTT +
Preference number: 4 (lower is better)
Translates to: NIVGLGIQCNQFTSKRTGSTSTK*LPYSRV
Trigger: AACCCTAGAGTAAGGCAGGCACTTTGTGGAGGTGGA...CCCAGTCCTCTTAGAAGTGAACTGATTGCACTGGATCCCTAAACCCACAATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp CTGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTAGGCTGGATGCCCTCTaGGTCAGCCGACCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: LAGLGMLFTKMYTHYTTSRLDAL*VSRPVG
Trigger: ACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCT...ACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp TTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGAGAAAAACACCAGGCTaGATGCCCTCTGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LIFPPTPCWRYNVSIHCVRKTPG*MPSGSA
Trigger: GGCTGACCCAGAGGGCATCCAGCCTGGTGTTTTTCT...CACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR TCA 90 bp ACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATGCATGTCTTGTGAGTTATGGTaGCAGTGCAGGGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: TPCWRYNVSIHCVSIICMSCELW*QCRALG
Trigger: CCCAAGGGCCCTGCACTGTCACCATAACTCACAAGA...CATGCATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR TCA 90 bp AACATTGTGGGTTTAGGGATCCAGTGCAATCAGTTCACTTCTAAGAGGACTGGGAGCAAAAGCCCTAGGTaGATACATGAGGTTCAGACC +
Preference number: 4 (lower is better)
Translates to: NIVGLGIQCNQFTSKRTGSKSPR*IHEVQT
Trigger: GGTCTGAACCTCATGTATTCACCTAGGGCTTTTGCT...CCCAGTCCTCTTAGAAGTGAACTGATTGCACTGGATCCCTAAACCCACAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp CACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATCTTGTCTCAAACTCCTaGCCTCAGGTGATACGCCTC +
Preference number: 4 (lower is better)
Translates to: HPHLVGDIMCPSIVCPSYLVSNS*PQVIRL
Trigger: GAGGCGTATCACCTGAGGTCAGGAGTTTGAGACAAG...ATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp TTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCTGCCTGCAGGCACTaGCCACAAAAATACAGACCC +
Preference number: 4 (lower is better)
Translates to: LIFPPTPCWRYNVSIHCVSACRH*PQKYRP
Trigger: GGGTCTGTATTTTTGTGGTCAGTGCCTGCAGGCAGA...CACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp AAAGTCCCTGCTAACTTGGCTCTCACTGATGCCAGAAGGACAGCATTTAATTTTAAACCATACAGTAACTaGACAGGGGCACGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: KVPANLALTDARRTAFNFKPYSN*TGARCP
Trigger: GGGGCAACGTGCCCCTGTGCAGTTACTGTATGGTTT...AAAATTAAATGCTGTCCTTCTGGCATCAGTGAGAGCCAAGTTAGCAGGGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR GCA 90 bp AGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCTTTCAAGGCTCCCCATCCACCTaGATTGGCATCATGGAGCAC +
Preference number: 4 (lower is better)
Translates to: RRMLTINHAGLTVIISFQGSPST*IGIMEH
Trigger: GTGCTCCATGATGCCAATGCAGGTGGATGGGGAGCC...TTGAAAGGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp AGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCTTTCAATGTGGCTGCATTGACTaGAGTGAGAAGGCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: RRMLTINHAGLTVIISFQCGCID*SEKAGA
Trigger: GGCGCCTGCCTTCTCACTGCAGTCAATGCAGCCACA...TTGAAAGGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp AATTTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGCTCACTGCAAGCTCTaGCGCCTGGGTTCGAGCAAT +
Preference number: 4 (lower is better)
Translates to: NLIFPPTPCWRYNVSIHCAHCKL*RLGSSN
Trigger: ATTGCTCGAACCCAGGCGGCAGAGCTTGCAGTGAGC...ACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp TTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCCTTACCTTCGTTGCTTaGCCAGCTCCTGTAAGCACT +
Preference number: 4 (lower is better)
Translates to: FPPTPCWRYNVSIHCVSILTFVA*PAPVST
Trigger: AGTGCTTACAGGAGCTGGGCAAGCAACGAAGGTAAG...GATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp GAACAAAAGCTAAAATATACAGTGGCCATGAAGCAGGCACCACTTAGAAACCTCGGAGTGGAGGCTGGATaGATCGTCTCAGCAAATGAC +
Preference number: 4 (lower is better)
Translates to: EQKLKYTVAMKQAPLRNLGVEAG*IVSAND
Trigger: GTCATTTGCTGAGACGATGCATCCAGCCTCCACTCC...GAGGTTTCTAAGTGGTGCCTGCTTCATGGCCACTGTATATTTTAGCTTTTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CCA 90 bp CACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATGACCATCGTCATGCCTaGCTAGAGGGTAAGTCTCGT +
Preference number: 4 (lower is better)
Translates to: HPHLVGDIMCPSIVCPSYDHRHA*LEGKSR
Trigger: ACGAGACTTACCCTCTAGCCAGGCATGACGATGGTC...ATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp GACATGAGACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACCCCATCCACCTGCATTaGCATCATGGAGCACTTCAA +
Preference number: 4 (lower is better)
Translates to: DMRQHILQSESHSQNSHNPIHLH*HHGALQ
Trigger: TTGAAGTGCTCCATGATGCCAATGCAGGTGGATGGG...GTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTCTCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp ATCCACCTGCATTGGCATCATGGAGCACTTCAAAATCAGCTGATATTAGGGAACCCCATCCACCTGCATTaGCATCATGGAGCACTTCAA +
Preference number: 4 (lower is better)
Translates to: IHLHWHHGALQNQLILGNPIHLH*HHGALQ
Trigger: TTGAAGTGCTCCATGATGCCAATGCAGGTGGATGGG...GTTCCCTAATATCAGCTGATTTTGAAGTGCTCCATGATGCCAATGCAGGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572944.1
CDS-3UTR CCA 90 bp TTTACTATTCTCCTTTTGGGGGTTCCTAGAAATCAATACATACACTTGGTTTGGGTGGGTCACGACCCTTaGGCTGGTCAACAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: FTILLLGVPRNQYIHLVWVGHDP*AGQQQR
Trigger: TCGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCAC...CCAAACCAAGTGTATGTATTGATTTCTAGGAACCCCCAAAAGGAGAATAGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp CACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCACTCTGGAGTCTCACTCTTTaGCCCAGGCCCCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: HILQSESHSQNSHNKFSLWSLTL*PRPHCS
Trigger: ACTGCAGTGGGGCCTGGGCCAAAGAGTGAGACTCCA...GAGTGAAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp TGCTGCAGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCAGCTGGCTGAGCAAGTaGAGTCATCACATGTGTCCT +
Preference number: 4 (lower is better)
Translates to: CCRRMLTINHAGLTVIISSWLSK*SHHMCP
Trigger: AGGACACATGTGATGACTCCACTTGCTCAGCCAGCT...GGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCTGCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp GACATGAGACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAGTGGTAGTTACAAGTaGTGGGCAGGGGAAAGTGCA +
Preference number: 4 (lower is better)
Translates to: DMRQHILQSESHSQNSHNSGSYK*WAGESA
Trigger: TGCACTTTCCCCTGCCCACCACTTGTAACTACCACT...GTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTCTCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp ACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATGCATGAACATGGTCTGGGCCTaGGGTGAGGCAAACTTAGGT +
Preference number: 4 (lower is better)
Translates to: TPCWRYNVSIHCVSIICMNMVWA*GEANLG
Trigger: ACCTAAGTTTGCCTCACCTCAGGCCCAGACCATGTT...CATGCATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR TCA 90 bp TTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGCTGCAGCGCGTACTCTaGAGAACAAGAGAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: LIFPPTPCWRYNVSIHCVLQRVL*RTRERL
Trigger: AAGCCTTTCTCTTGTTCTTCAGAGTACGCGCTGCAG...CACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp AATTTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTATAGTCTCGATCTCCTaGCCTCGTGATCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: NLIFPPTPCWRYNVSIHCIVSIS*PRDPPA
Trigger: GGCAGGTGGATCACGAGGTCAGGAGATCGAGACTAT...ACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp AATTTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTAAGAGGCCAGCTGGCTaGGCAAGTGGAGTCATCACA +
Preference number: 4 (lower is better)
Translates to: NLIFPPTPCWRYNVSIHCKRPAG*ASGVIT
Trigger: TGTGATGACTCCACTTGCTCAGCCAGCTGGCCTCTT...ACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp AAAGTCCCTGCTAACTTGGCTCTCACTGATGCCAGAAGGACAGCATTTAATTTTCACTCTATGAAATCCTaGTTCCCACGGCGCATTCTG +
Preference number: 4 (lower is better)
Translates to: KVPANLALTDARRTAFNFHSMKS*FPRRIL
Trigger: CAGAATGCGCCGTGGGAATCAGGATTTCATAGAGTG...AAAATTAAATGCTGTCCTTCTGGCATCAGTGAGAGCCAAGTTAGCAGGGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR GCA 90 bp CTGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTACCCGTGCTTGCTCTTaGGGAAGATGTCCCTGCGGT +
Preference number: 4 (lower is better)
Translates to: LAGLGMLFTKMYTHYTTSTRACS*GRCPCG
Trigger: ACCGCAGGGACATCTTCCGCAAGAGCAAGCACGGGT...ACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp TTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCAGATCTGAAAGACTaGTGGCAGAGCCCTGAACTG +
Preference number: 4 (lower is better)
Translates to: LIFPPTPCWRYNVSIHCVSDLKD*WQSPEL
Trigger: CAGTTCAGGGCTCTGCCAGCAGTCTTTCAGATCTGA...CACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp GACATGAGACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAACTCTTACCTTCGTTaGTTGCCCAGCTCCTGTAAG +
Preference number: 4 (lower is better)
Translates to: DMRQHILQSESHSQNSHNNSYLR*LPSSCK
Trigger: CTTACAGGAGCTGGGCAAGCAACGAAGGTAAGAGTT...GTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTCTCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp GAACAAAAGCTAAAATATACAGTGGCCATGAAGCAGGCACCACTTAGAAACCTCATAATCTCCTTGCACTaGAAGCGCTTGTCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: EQKLKYTVAMKQAPLRNLIISLH*KRLSAF
Trigger: GAAGGCCGACAAGCGCTTCCAGTGCAAGGAGATTAT...GAGGTTTCTAAGTGGTGCCTGCTTCATGGCCACTGTATATTTTAGCTTTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CCA 90 bp AACATTGTGGGTTTAGGGATCCAGTGCAATCAGTTCACTTCTAAGAGGACTGGGCAAAACCTGCGCAACTaGAATTTCTCCAGCATAACC +
Preference number: 4 (lower is better)
Translates to: NIVGLGIQCNQFTSKRTGQNLRN*NFSSIT
Trigger: GGTTATGCTGGAGAAATTCCAGTTGCGCAGGTTTTG...CCCAGTCCTCTTAGAAGTGAACTGATTGCACTGGATCCCTAAACCCACAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp AATTTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTTCACGACCCTTGGGCTaGTCAACAGCAGCGAACAAG +
Preference number: 4 (lower is better)
Translates to: NLIFPPTPCWRYNVSIHCSRPLG*STAANK
Trigger: CTTGTTCGCTGCTGTTGACCAGCCCAAGGGTCGTGA...ACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp TTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTGCTCTTTGAAAACATaGTCTGGGCCTGAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LIFPPTPCWRYNVSIHCVCSLKT*SGPEVR
Trigger: CCTCACCTCAGGCCCAGACCATGTTTTCAAAGAGCA...CACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGTGGCTCACTGCCCCTTaGAGGCGCACTGCACTAACT +
Preference number: 4 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVWLTAP*RRTALT
Trigger: AGTTAGTGCAGTGCGCCTCCAAGGGGCAGTGAGCCA...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp CACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATCTTTCCCCAGAACCCTaGAATGTACCTTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: HPHLVGDIMCPSIVCPSYLSPEP*NVPFWA
Trigger: AGCCCAGAAAGGTACATTCCAGGGTTCTGGGGAAAG...ATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp TTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGGGATGCCCTCTTGCCTaGACAATGTCAGAGGAACAA +
Preference number: 4 (lower is better)
Translates to: LIFPPTPCWRYNVSIHCVGCPLA*TMSEEQ
Trigger: TTGTTCCTCTGACATTGTCCAGGCAAGAGGGCATCC...CACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp AATTTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGCAAGAGGCCAGCTaGCTGAGCAAGTGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: NLIFPPTPCWRYNVSIHCVQEAS*LSKWSH
Trigger: ATGACTCCACTTGCTCAGCCAGCTGGCCTCTTGCAC...ACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp CACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATGGTAGTTACAAGTGGTaGGCAGGGGAAAGTGCAAGA +
Preference number: 4 (lower is better)
Translates to: HPHLVGDIMCPSIVCPSYGSYKW*AGESAR
Trigger: TCTTGCACTTTCCCCTGCCCACCACTTGTAACTACC...ATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp CTGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTTCGCAAAGCTTGGGTTaGCAGCCACACTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LAGLGMLFTKMYTHYTTSSQSLG*QPHCCL
Trigger: CAAGCAGCAGTGTGGCTGTCAACCCAAGCTTTGCGA...ACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR TCA 90 bp AATTTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTAACATGGTCTGGGCCTaGGGTGAGGCAAACTTAGGT +
Preference number: 4 (lower is better)
Translates to: NLIFPPTPCWRYNVSIHCNMVWA*GEANLG
Trigger: ACCTAAGTTTGCCTCACCTCAGGCCCAGACCATGTT...ACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR TCA 90 bp AAAGTCCCTGCTAACTTGGCTCTCACTGATGCCAGAAGGACAGCATTTAATTTTAGTGCTGCCTTGGAATaGCACTTGTTTTCACTGCAC +
Preference number: 4 (lower is better)
Translates to: KVPANLALTDARRTAFNFSAALE*HLFSLH
Trigger: GTGCAGTGAAAACAAGTGTCATTCCAAGGCAGCACT...AAAATTAAATGCTGTCCTTCTGGCATCAGTGAGAGCCAAGTTAGCAGGGACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR GCA 90 bp AAAGTCCCTGCTAACTTGGCTCTCACTGATGCCAGAAGGACAGCATTTAATTTTAGCCACACTGCTGCTTaGAAACCATACAGTAACTGC +
Preference number: 4 (lower is better)
Translates to: KVPANLALTDARRTAFNFSHTAA*KPYSNC
Trigger: GCAGTTACTGTATGGTTTGCAAGCAGCAGTGTGGCT...AAAATTAAATGCTGTCCTTCTGGCATCAGTGAGAGCCAAGTTAGCAGGGACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR GCA 90 bp AACATTGTGGGTTTAGGGATCCAGTGCAATCAGTTCACTTCTAAGAGGACTGGGTATTGGATAGATCGTTaGCTGTTCCCAGAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: NIVGLGIQCNQFTSKRTGYWIDR*LFPEAK
Trigger: TTTTGCCTCTGGGAACAGGCAACGATCTATCCAATA...CCCAGTCCTCTTAGAAGTGAACTGATTGCACTGGATCCCTAAACCCACAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp CACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATCATGCTGCAGGAGGATaGTCACAATTAACCATGCTG +
Preference number: 4 (lower is better)
Translates to: HPHLVGDIMCPSIVCPSYHAAGG*SQLTML
Trigger: CAGCATGGTTAATTGTGAGCATCCTCCTGCAGCATG...ATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR GCA 90 bp GACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTAGGTGCCCGCCACCATaGCCGGCTAAATTTTTGGAT +
Preference number: 4 (lower is better)
Translates to: DSTYFRVSPTLKTVITNFRCPPP*PAKFLD
Trigger: ATCCAAAAATTTAGCCGGGCATGGTGGCGGGCACCT...AAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp AACATTGTGGGTTTAGGGATCCAGTGCAATCAGTTCACTTCTAAGAGGACTGGGCATATATGTTTGCCCTaGTGTAGACCAAGAACCACT +
Preference number: 4 (lower is better)
Translates to: NIVGLGIQCNQFTSKRTGHICLP*CRPRTT
Trigger: AGTGGTTCTTGGTCTACAGCAGGGCAAACATATATG...CCCAGTCCTCTTAGAAGTGAACTGATTGCACTGGATCCCTAAACCCACAATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp AAAGTCCCTGCTAACTTGGCTCTCACTGATGCCAGAAGGACAGCATTTAATTTTCAAAGCTGCCACGCTTaGACAAACTCAGGGATGTTT +
Preference number: 4 (lower is better)
Translates to: KVPANLALTDARRTAFNFQSCHA*TNSGMF
Trigger: AAACATCCCTGAGTTTGTGCAAGCGTGGCAGCTTTG...AAAATTAAATGCTGTCCTTCTGGCATCAGTGAGAGCCAAGTTAGCAGGGACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR GCA 90 bp AAAGTCCCTGCTAACTTGGCTCTCACTGATGCCAGAAGGACAGCATTTAATTTTTCAGCAAATGACTACTaGAAAGCTGCCACGCTTGCA +
Preference number: 4 (lower is better)
Translates to: KVPANLALTDARRTAFNFSANDY*KAATLA
Trigger: TGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGA...AAAATTAAATGCTGTCCTTCTGGCATCAGTGAGAGCCAAGTTAGCAGGGACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CCA 90 bp AAAGTCCCTGCTAACTTGGCTCTCACTGATGCCAGAAGGACAGCATTTAATTTTTGTAATCGCAAAGCTTaGGTTGACAGCCACACTGCT +
Preference number: 4 (lower is better)
Translates to: KVPANLALTDARRTAFNFCNRKA*VDSHTA
Trigger: AGCAGTGTGGCTGTCAACCCAAGCTTTGCGATTACA...AAAATTAAATGCTGTCCTTCTGGCATCAGTGAGAGCCAAGTTAGCAGGGACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CCA 90 bp TTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTGTAATCGCAAAGCTTaGGTTGACAGCCACACTGCT +
Preference number: 4 (lower is better)
Translates to: LIFPPTPCWRYNVSIHCVCNRKA*VDSHTA
Trigger: AGCAGTGTGGCTGTCAACCCAAGCTTTGCGATTACA...CACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp TGCTGCAGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCTTCCACTACGAGAGTTaGCCAGGATTATTAATGGGG +
Preference number: 4 (lower is better)
Translates to: CCRRMLTINHAGLTVIISFHYES*PGLLMG
Trigger: CCCCATTAATAATCCTGGCCAACTCTCGTAGTGGAA...GGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCTGCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp GACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTGACCATCGTCATGCCTaGCTAGAGGGTAAGTCTCGT +
Preference number: 4 (lower is better)
Translates to: DSTYFRVSPTLKTVITNFDHRHA*LEGKSR
Trigger: ACGAGACTTACCCTCTAGCCAGGCATGACGATGGTC...AAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp TTTACTATTCTCCTTTTGGGGGTTCCTAGAAATCAATACATACACTTGGTTTGGTCACGACCCTTGGGCTaGTCAACAGCAGCGAACAAG +
Preference number: 4 (lower is better)
Translates to: FTILLLGVPRNQYIHLVWSRPLG*STAANK
Trigger: CTTGTTCGCTGCTGTTGACCAGCCCAAGGGTCGTGA...CCAAACCAAGTGTATGTATTGATTTCTAGGAACCCCCAAAAGGAGAATAGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp AATTTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGATCTGAAAGACTGCTaGCAGAGCCCTGAACTGGAC +
Preference number: 4 (lower is better)
Translates to: NLIFPPTPCWRYNVSIHCDLKDC*QSPELD
Trigger: GTCCAGTTCAGGGCTCTGCCAGCAGTCTTTCAGATC...ACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp GAACAAAAGCTAAAATATACAGTGGCCATGAAGCAGGCACCACTTAGAAACCTCAAGTCCCTGCTAACTTaGCTCTCACTGATGCCAGAA +
Preference number: 4 (lower is better)
Translates to: EQKLKYTVAMKQAPLRNLKSLLT*LSLMPE
Trigger: TTCTGGCATCAGTGAGAGCCAAGTTAGCAGGGACTT...GAGGTTTCTAAGTGGTGCCTGCTTCATGGCCACTGTATATTTTAGCTTTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CCA 90 bp ATCCACCTGCATTGGCATCATGGAGCACTTCAAAATCAGCTGATATTAGGGAACCCTGCATTGGCATCATaGAGCACTTCAAAATCAGCT +
Preference number: 4 (lower is better)
Translates to: IHLHWHHGALQNQLILGNPALAS*STSKSA
Trigger: AGCTGATTTTGAAGTGCTCCATGATGCCAATGCAGG...GTTCCCTAATATCAGCTGATTTTGAAGTGCTCCATGATGCCAATGCAGGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572944.1
3UTR CAA 72 bp CATACTCTACCAACTGAAAATAAGGTGAATTCACCTTaGATCCCACTTACTGCTCTACTCTGCCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: HTLPTENKVNSP*IPLTALLCQEP
Trigger: TGGCTCCTGGCAGAGTAGAGCAGTAAGTGGGATCAAAGGTGAATTCACCTTATTTTCAGTTGGTAGAGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp CACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATATTGCATGTGTCTTGTaGGTTATGGTGACAGTGCAG +
Preference number: 4 (lower is better)
Translates to: HPHLVGDIMCPSIVCPSYIACVL*VMVTVQ
Trigger: CTGCACTGTCACCATAACTCACAAGACACATGCAAT...ATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR TCA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGGGTCTGGGCCTGAGGTaGGGCAAACTTAGGTTTATG +
Preference number: 4 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVGLGLR*GKLRFM
Trigger: CATAAACCTAAGTTTGCCTCACCTCAGGCCCAGACC...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp CTTTATATCTTCTTGATCCGAAGTACTAGAGATGTCATCATCTGTTTGTTCTCCAAACCATACAGTAACTaGACAGGGGCACGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: LYIFLIRSTRDVIICLFSKPYSN*TGARCP
Trigger: GGGGCAACGTGCCCCTGTGCAGTTACTGTATGGTTT...GGAGAACAAACAGATGATGACATCTCTAGTACTTCGGATCAAGAAGATATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572944.1
CDS-3UTR GCA 90 bp ATCCACCTGCATTGGCATCATGGAGCACTTCAAAATCAGCTGATATTAGGGAACTATTGGATAGATCGTTaGCTGTTCCCAGAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: IHLHWHHGALQNQLILGNYWIDR*LFPEAK
Trigger: TTTTGCCTCTGGGAACAGGCAACGATCTATCCAATA...GTTCCCTAATATCAGCTGATTTTGAAGTGCTCCATGATGCCAATGCAGGTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572944.1
CDS-3UTR GCA 90 bp GACATGAGACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACACATTTCGCAAAACCTaGGCAACTGGAATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: DMRQHILQSESHSQNSHNTFRKT*ATGISP
Trigger: TGGAGAAATTCCAGTTGCGCAGGTTTTGCGAAATGT...GTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTCTCATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp AATTTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTATGCTGCAGATAGCCTaGAGCGCGTACTCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: NLIFPPTPCWRYNVSIHCMLQIA*SAYSEE
Trigger: TTCTTCAGAGTACGCGCTGCAGGCTATCTGCAGCAT...ACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp AATTTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTCTTGTCCCCCAACACTaGATGGGTCACAGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: NLIFPPTPCWRYNVSIHCLVPQH*MGHSPK
Trigger: TTTTGGACTGTGACCCATGCAGTGTTGGGGGACAAG...ACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp TGCTGCAGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCAACAAGTACTCGAGCTaGATAATATGGGAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: CCRRMLTINHAGLTVIISNKYSS*IIWEKS
Trigger: ACTCTTCTCCCATATTATTCAGCTCGAGTACTTGTT...GGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCTGCAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR TCA 90 bp CACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCACTCGCACATACTTCAGAGTaGGTCCCACTCTCAAAACAG +
Preference number: 4 (lower is better)
Translates to: HILQSESHSQNSHNKFSLAHTSE*VPLSKQ
Trigger: CTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGC...GAGTGAAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR TCA 90 bp GACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTGCACATACTTCAGAGTaGGTCCCACTCTCAAAACAG +
Preference number: 4 (lower is better)
Translates to: DSTYFRVSPTLKTVITNFAHTSE*VPLSKQ
Trigger: CTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGC...AAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR TCA 90 bp AATTTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGCACATACTTCAGAGTaGGTCCCACTCTCAAAACAG +
Preference number: 4 (lower is better)
Translates to: NLIFPPTPCWRYNVSIHCAHTSE*VPLSKQ
Trigger: CTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGC...ACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR TCA 90 bp ACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATGCATGCCTAACACACGTGTATaGTTCTGTGCTCTTAGGCTA +
Preference number: 4 (lower is better)
Translates to: TPCWRYNVSIHCVSIICMPNTRV*FCALRL
Trigger: TAGCCTAAGAGCACAGAATCATACACGTGTGTTAGG...CATGCATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp AAAGTCCCTGCTAACTTGGCTCTCACTGATGCCAGAAGGACAGCATTTAATTTTAGATTCTACATGTCCTaGAAGACCAAGCGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: KVPANLALTDARRTAFNFRFYMS*KTKRQK
Trigger: CTTTTGACGCTTGGTCTTTCAGGACATGTAGAATCT...AAAATTAAATGCTGTCCTTCTGGCATCAGTGAGAGCCAAGTTAGCAGGGACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR GCA 90 bp GACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTAGCCACACTGCTGCTTaGAAACCATACAGTAACTGC +
Preference number: 4 (lower is better)
Translates to: DSTYFRVSPTLKTVITNFSHTAA*KPYSNC
Trigger: GCAGTTACTGTATGGTTTGCAAGCAGCAGTGTGGCT...AAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp ACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATGCATGATTAATGGGGTCCACTaGTTTCCAAGCTTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: TPCWRYNVSIHCVSIICMINGVH*FPSLEA
Trigger: AGCCTCTAAGCTTGGAAAGCAGTGGACCCCATTAAT...CATGCATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGCTTCATGTCATCAACTaGATCCAGGACCCACCCTAC +
Preference number: 4 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVLHVIN*IQDPPY
Trigger: GTAGGGTGGGTCCTGGATGCAGTTGATGACATGAAG...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp CAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCACTCTCATGTAAGCAGCCTCACTGTATGTaGCTGTCCTATTCGAAAAGG +
Preference number: 4 (lower is better)
Translates to: QSESHSQNSHNKFSLSCKQPHCM*LSYSKR
Trigger: CCTTTTCGAATAGGACAGGCACATACAGTGAGGCTG...CTTACATGAGAGTGAAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp AATTTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTCCTCCACAAAGTGCCTaGCTTACTCTAGGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: NLIFPPTPCWRYNVSIHCPPQSA*LTLGFF
Trigger: GAAAAACCCTAGAGTAAGGCAGGCACTTTGTGGAGG...ACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp AATTTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTATGCTTTCACATTTCTaGCTGCAGGCACTGACCACA +
Preference number: 4 (lower is better)
Translates to: NLIFPPTPCWRYNVSIHCMLSHF*LQALTT
Trigger: TGTGGTCAGTGCCTGCAGGCAGAAATGTGAAAGCAT...ACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp ACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATGCATGTTCCCAGGAATCATGTaGTCCAGTTTACCGAAGTCT +
Preference number: 4 (lower is better)
Translates to: TPCWRYNVSIHCVSIICMFPGIM*SSLPKS
Trigger: AGACTTCGGTAAACTGGAGCACATGATTCCTGGGAA...CATGCATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp AGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCTTTCAACACCCTCACTGTATGTaGCTGTCCTATTCGAAAAGG +
Preference number: 4 (lower is better)
Translates to: RRMLTINHAGLTVIISFQHPHCM*LSYSKR
Trigger: CCTTTTCGAATAGGACAGGCACATACAGTGAGGGTG...TTGAAAGGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570738.1
CDS-3UTR CCA 90 bp TTTACTATTCTCCTTTTGGGGGTTCCTAGAAATCAATACATACACTTGGTTTGGATAATCTCCTTGCACTaGAAGCGCTTGTCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: FTILLLGVPRNQYIHLVWIISLH*KRLSAF
Trigger: GAAGGCCGACAAGCGCTTCCAGTGCAAGGAGATTAT...CCAAACCAAGTGTATGTATTGATTTCTAGGAACCCCCAAAAGGAGAATAGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGATAATCTCCTTGCACTaGAAGCGCTTGTCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVIISLH*KRLSAF
Trigger: GAAGGCCGACAAGCGCTTCCAGTGCAAGGAGATTAT...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp TTTACTATTCTCCTTTTGGGGGTTCCTAGAAATCAATACATACACTTGGTTTGGTGCTCTTTGAAAACATaGTCTGGGCCTGAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: FTILLLGVPRNQYIHLVWCSLKT*SGPEVR
Trigger: CCTCACCTCAGGCCCAGACCATGTTTTCAAAGAGCA...CCAAACCAAGTGTATGTATTGATTTCTAGGAACCCCCAAAAGGAGAATAGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
3UTR CAA 72 bp CTAAAAGTATGTGATCAGAACTTGCCACATATATGTTaGCCCTGCTGTAGACCAAGAACCACTTTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: LKVCDQNLPHIC*PCCRPRTTFWD
Trigger: GTCCCAAAAAGTGGTTCTTGGTCTACAGCAGGGCAAACATATATGTGGCAAGTTCTGATCACATACTTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp AATTTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTATTGCATGTGTCTTGTaGGTTATGGTGACAGTGCAG +
Preference number: 4 (lower is better)
Translates to: NLIFPPTPCWRYNVSIHCIACVL*VMVTVQ
Trigger: CTGCACTGTCACCATAACTCACAAGACACATGCAAT...ACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR TCA 90 bp TGCTGCAGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCATGTATCTACTTGCGTaGGGATTCTATGCAAAGTTT +
Preference number: 4 (lower is better)
Translates to: CCRRMLTINHAGLTVIISMYLLA*GFYAKF
Trigger: AAACTTTGCATAGAATCCTCACGCAAGTAGATACAT...GGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCTGCAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR TCA 90 bp CAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCACTCTCATGTAAGACATTTGTAAATAACTaGAGGCTGGCTGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: QSESHSQNSHNKFSLSCKTFVNN*RLAGLG
Trigger: CCCCAAACCAGCCAGCCTTCAGTTATTTACAAATGT...CTTACATGAGAGTGAAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR TCA 90 bp TTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGAAAAGCAGGTTAATTTaGTCTTTCCACCCACACCTT +
Preference number: 4 (lower is better)
Translates to: LIFPPTPCWRYNVSIHCVKSRLI*SFHPHL
Trigger: AAGGTGTGGGTGGAAAGATCAAATTAACCTGCTTTT...CACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR TCA 90 bp CACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATATGGCAATTCATGGATaGCAGATTCATAATAGACCC +
Preference number: 4 (lower is better)
Translates to: HPHLVGDIMCPSIVCPSYMAIHG*QIHNRP
Trigger: GGGTCTATTATGAATCTGTCATCCATGAATTGCCAT...ATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR TCA 90 bp ACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATGCATGAACAAGGAAAACAACTaGGCTTTCCAGCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: TPCWRYNVSIHCVSIICMNKENN*AFQLFL
Trigger: AAGGAAGAGCTGGAAAGCTCAGTTGTTTTCCTTGTT...CATGCATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp ACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATGCATGGAACAAACGTTTTTATaGGCCATCATCATCCACCTC +
Preference number: 4 (lower is better)
Translates to: TPCWRYNVSIHCVSIICMEQTFL*AIIIHL
Trigger: GAGGTGGATGATGATGGCTCATAAAAACGTTTGTTC...CATGCATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp GAACAAAAGCTAAAATATACAGTGGCCATGAAGCAGGCACCACTTAGAAACCTCCATCAGTTTTGCGGCTaGAGGGAAAAGTTAATTTGT +
Preference number: 4 (lower is better)
Translates to: EQKLKYTVAMKQAPLRNLHQFCG*REKLIC
Trigger: ACAAATTAACTTTTCCCTTCAGCCGCAAAACTGATG...GAGGTTTCTAAGTGGTGCCTGCTTCATGGCCACTGTATATTTTAGCTTTTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR GCA 90 bp CAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCACTCTCATGTAAGATTAATGGGGTCCACTaGTTTCCAAGCTTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: QSESHSQNSHNKFSLSCKINGVH*FPSLEA
Trigger: AGCCTCTAAGCTTGGAAAGCAGTGGACCCCATTAAT...CTTACATGAGAGTGAAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp AATTTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTAGAAAACAGAGATGGTaGCTTCTCACGATGAGCATG +
Preference number: 4 (lower is better)
Translates to: NLIFPPTPCWRYNVSIHCRKQRW*LLTMSM
Trigger: CATGCTCATCGTGAGAAGGCACCATCTCTGTTTTCT...ACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGCATGCTGCAGGAGGATaGTCACAATTAACCATGCTG +
Preference number: 4 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVHAAGG*SQLTML
Trigger: CAGCATGGTTAATTGTGAGCATCCTCCTGCAGCATG...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR GCA 90 bp CTTTATATCTTCTTGATCCGAAGTACTAGAGATGTCATCATCTGTTTGTTCTCCCATGCTGCAGGAGGATaGTCACAATTAACCATGCTG +
Preference number: 4 (lower is better)
Translates to: LYIFLIRSTRDVIICLFSHAAGG*SQLTML
Trigger: CAGCATGGTTAATTGTGAGCATCCTCCTGCAGCATG...GGAGAACAAACAGATGATGACATCTCTAGTACTTCGGATCAAGAAGATATAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572944.1
CDS-3UTR GCA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGATACTTTCAACAGCCTaGCCAGGCATTCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVILSTA*PGILML
Trigger: CAGCATCAGAATGCCTGGGCAGGCTGTTGAAAGTAT...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp ACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATGCATGCAGAGATTTCTATGTTaGATCTCCAGAGACAGGGAA +
Preference number: 4 (lower is better)
Translates to: TPCWRYNVSIHCVSIICMQRFLC*ISRDRE
Trigger: TTCCCTGTCTCTGGAGATGCAACATAGAAATCTCTG...CATGCATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp ACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATGCATGGGTTTAGGGATCCAGTaGAATCAGTTCACTTCTAAG +
Preference number: 4 (lower is better)
Translates to: TPCWRYNVSIHCVSIICMGLGIQ*NQFTSK
Trigger: CTTAGAAGTGAACTGATTGCACTGGATCCCTAAACC...CATGCATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp CACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATCACACAGTTCTGCCATaGATATTAAGATGCATTCAC +
Preference number: 4 (lower is better)
Translates to: HPHLVGDIMCPSIVCPSYHTVLP*ILRCIH
Trigger: GTGAATGCATCTTAATATGCATGGCAGAACTGTGTG...ATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGTGTACAGTGACCAGCTaGATGAGCCATAAACCACTG +
Preference number: 4 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVCTVTS*MSHKPL
Trigger: CAGTGGTTTATGGCTCATGCAGCTGGTCACTGTACA...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572944.1
CDS-3UTR CCA 90 bp GACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCCCAACCCAATGTATTaGATAGATCGTTGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: DSTYFRVSPTLKTVITNFPNPMY*IDRCLF
Trigger: GAACAGGCAACGATCTATCCAATACATTGGGTTGGG...AAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp AATTTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTCCACCCACACCTTGTTaGAGATATAATGTGTCCATC +
Preference number: 4 (lower is better)
Translates to: NLIFPPTPCWRYNVSIHCPPTPC*RYNVSI
Trigger: GATGGACACATTATATCTCCAACAAGGTGTGGGTGG...ACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR CCA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGGGCAGAGCCCTGAACTaGACTGAGAACAAACGTTTT +
Preference number: 4 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVGRALN*TENKRF
Trigger: AAAACGTTTGTTCTCAGTCCAGTTCAGGGCTCTGCC...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR TCA 90 bp CTGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTATTGCATGTGTCTTGTaGGTTATGGTGACAGTGCAG +
Preference number: 4 (lower is better)
Translates to: LAGLGMLFTKMYTHYTTSIACVL*VMVTVQ
Trigger: CTGCACTGTCACCATAACTCACAAGACACATGCAAT...ACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR TCA 90 bp TTTACTATTCTCCTTTTGGGGGTTCCTAGAAATCAATACATACACTTGGTTTGGACATTTGTAAATAACTaGAGGCTGGCTGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: FTILLLGVPRNQYIHLVWTFVNN*RLAGLG
Trigger: CCCCAAACCAGCCAGCCTTCAGTTATTTACAAATGT...CCAAACCAAGTGTATGTATTGATTTCTAGGAACCCCCAAAAGGAGAATAGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR TCA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGCAGAGATTAATGTCATaGAAGACCACAAAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVQRLMS*KTTKPG
Trigger: CCCAGGCTTTGTGGTCTTTCATGACATTAATCTCTG...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR TCA 90 bp CACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCACTCAGCAGAAAAACTTCATaGCAGACCAGTAGTGATGCA +
Preference number: 4 (lower is better)
Translates to: HILQSESHSQNSHNKFSLSRKTS*QTSSDA
Trigger: TGCATCACTACTGGTCTGTCATGAAGTTTTTCTGCT...GAGTGAAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR TCA 90 bp ACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATGCATGCAGAGAAAGAAAATTTaGGGCTCAGGAAGAACAAGT +
Preference number: 4 (lower is better)
Translates to: TPCWRYNVSIHCVSIICMQRKKI*GSGRTS
Trigger: ACTTGTTCTTCCTGAGCCTCAAATTTTCTTTCTCTG...CATGCATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp AGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCTTTCAAACATTTCGCAAAACCTaGGCAACTGGAATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RRMLTINHAGLTVIISFQTFRKT*ATGISP
Trigger: TGGAGAAATTCCAGTTGCGCAGGTTTTGCGAAATGT...TTGAAAGGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp TTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGGAACATGTATCTACTTaGGTGAGGATTCTATGCAAA +
Preference number: 4 (lower is better)
Translates to: LIFPPTPCWRYNVSIHCVEHVST*VRILCK
Trigger: TTTGCATAGAATCCTCACGCAAGTAGATACATGTTC...CACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR GCA 90 bp GACATGAGACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAAAAGATCCTGAATTaGAGCTCAAATGGTTACCTA +
Preference number: 4 (lower is better)
Translates to: DMRQHILQSESHSQNSHNKKILN*SSNGYL
Trigger: TAGGTAACCATTTGAGCTGCAATTCAGGATCTTTTT...GTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTCTCATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp AATTTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTTGCCACATATATGTTTaGCCTGCTGTAGACCAAGAA +
Preference number: 4 (lower is better)
Translates to: NLIFPPTPCWRYNVSIHCCHIYV*PAVDQE
Trigger: TTCTTGGTCTACAGCAGGGCAAACATATATGTGGCA...ACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp TTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTATGTGATCAGAACTTaGCACATATATGTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: LIFPPTPCWRYNVSIHCVYVIRT*HIYVCP
Trigger: AGGGCAAACATATATGTGGCAAGTTCTGATCACATA...CACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGCTTACTGCTCTACTCTaGCAGGAGCCAGTTTATATG +
Preference number: 4 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVLTALL*QEPVYM
Trigger: CATATAAACTGGCTCCTGGCAGAGTAGAGCAGTAAG...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp TTTACTATTCTCCTTTTGGGGGTTCCTAGAAATCAATACATACACTTGGTTTGGCAAAACCTGCGCAACTaGAATTTCTCCAGCATAACC +
Preference number: 4 (lower is better)
Translates to: FTILLLGVPRNQYIHLVWQNLRN*NFSSIT
Trigger: GGTTATGCTGGAGAAATTCCAGTTGCGCAGGTTTTG...CCAAACCAAGTGTATGTATTGATTTCTAGGAACCCCCAAAAGGAGAATAGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp CTGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTCCACCCACACCTTGTTaGAGATATAATGTGTCCATC +
Preference number: 4 (lower is better)
Translates to: LAGLGMLFTKMYTHYTTSPPTPC*RYNVSI
Trigger: GATGGACACATTATATCTCCAACAAGGTGTGGGTGG...ACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR CCA 90 bp CACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATGCAAACTTAGGTTTATaGCAATTCATGGATGACAGA +
Preference number: 4 (lower is better)
Translates to: HPHLVGDIMCPSIVCPSYANLGL*QFMDDR
Trigger: TCTGTCATCCATGAATTGCCATAAACCTAAGTTTGC...ATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGGCCCGGCTAAATTTTTaGATTTTTAGTAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVARLNF*IFSRGG
Trigger: CCCGCCTCTACTAAAAATCCAAAAATTTAGCCGGGC...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000284061.8
3UTR CAA 72 bp TCCCTCATCCATCTATTCAGTCGCCTTTATATCTTCTaGATCCGAAGTACTAGAGATGTCATCATCTGTTTG +
Preference number: 4 (lower is better)
Translates to: SLIHLFSRLYIF*IRSTRDVIICL
Trigger: CAAACAGATGATGACATCTCTAGTACTTCGGATCAAGAAGATATAAAGGCGACTGAATAGATGGATGAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572944.1
CDS-3UTR TCA 90 bp GACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTAAAAGCAGGTTAATTTaGTCTTTCCACCCACACCTT +
Preference number: 4 (lower is better)
Translates to: DSTYFRVSPTLKTVITNFKSRLI*SFHPHL
Trigger: AAGGTGTGGGTGGAAAGATCAAATTAACCTGCTTTT...AAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR TCA 90 bp AATTTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTATGGCAATTCATGGATaGCAGATTCATAATAGACCC +
Preference number: 4 (lower is better)
Translates to: NLIFPPTPCWRYNVSIHCMAIHG*QIHNRP
Trigger: GGGTCTATTATGAATCTGTCATCCATGAATTGCCAT...ACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR TCA 90 bp TTTACTATTCTCCTTTTGGGGGTTCCTAGAAATCAATACATACACTTGGTTTGGAGCAGAAAAACTTCATaGCAGACCAGTAGTGATGCA +
Preference number: 4 (lower is better)
Translates to: FTILLLGVPRNQYIHLVWSRKTS*QTSSDA
Trigger: TGCATCACTACTGGTCTGTCATGAAGTTTTTCTGCT...CCAAACCAAGTGTATGTATTGATTTCTAGGAACCCCCAAAAGGAGAATAGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR TCA 90 bp CAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCACTCTCATGTAAGTCTTGGTCTGATATCTaGTACCAGCAACACATTTCT +
Preference number: 4 (lower is better)
Translates to: QSESHSQNSHNKFSLSCKSWSDI*YQQHIS
Trigger: AGAAATGTGTTGCTGGTATCAGATATCAGACCAAGA...CTTACATGAGAGTGAAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp TTTACTATTCTCCTTTTGGGGGTTCCTAGAAATCAATACATACACTTGGTTTGGTCCCAGAGGCAAAACTaGAACTTGTGGAATGTACTT +
Preference number: 4 (lower is better)
Translates to: FTILLLGVPRNQYIHLVWSQRQN*NLWNVL
Trigger: AAGTACATTCCACAAGTTGCAGTTTTGCCTCTGGGA...CCAAACCAAGTGTATGTATTGATTTCTAGGAACCCCCAAAAGGAGAATAGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp CTGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTTCCCAGAGGCAAAACTaGAACTTGTGGAATGTACTT +
Preference number: 4 (lower is better)
Translates to: LAGLGMLFTKMYTHYTTSSQRQN*NLWNVL
Trigger: AAGTACATTCCACAAGTTGCAGTTTTGCCTCTGGGA...ACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGTGCGTGAGGATTCTATaGAAAGTTTTCACTCCCTCA +
Preference number: 4 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVCVRIL*KVFTPS
Trigger: TGAGGGAGTGAAAACTTTGCATAGAATCCTCACGCA...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR GCA 90 bp CACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATTGGCTGGTTTGGGGATaGTATTTACAAAAATGTATA +
Preference number: 4 (lower is better)
Translates to: HPHLVGDIMCPSIVCPSYWLVWG*YLQKCI
Trigger: TATACATTTTTGTAAATAGCATCCCCAAACCAGCCA...ATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR GCA 90 bp CTGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGGGATTAAAGGCATGTaGCAATGTACCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: LAGLGMLFTKMYTHYTTSGIKGM*QCTWLI
Trigger: AATTAGCCAGGTACATTGGCACATGCCTTTAATCCC...ACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp CACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATACACTAAGTCAAAGCTaGTTATTGTATCTCATGGTT +
Preference number: 4 (lower is better)
Translates to: HPHLVGDIMCPSIVCPSYTLSQS*LLYLMV
Trigger: AACCATGAGATACAATAAGCAGCTTTGACTTAGTGT...ATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp CTGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTCCATGCATATTAAGATaGATTCACTCTCCTGCCCTA +
Preference number: 4 (lower is better)
Translates to: LAGLGMLFTKMYTHYTTSPCILR*IHSPAL
Trigger: TAGGGCAGGAGAGTGAATGCATCTTAATATGCATGG...ACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp CACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATTTACTATTCTCCTTTTaGGGGTTCCTAGAAATCAAT +
Preference number: 4 (lower is better)
Translates to: HPHLVGDIMCPSIVCPSYLLFSF*GFLEIN
Trigger: ATTGATTTCTAGGAACCCCCAAAAGGAGAATAGTAA...ATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR TCA 90 bp CACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCACTCATGTATCTACTTGCGTaGGGATTCTATGCAAAGTTT +
Preference number: 4 (lower is better)
Translates to: HILQSESHSQNSHNKFSLMYLLA*GFYAKF
Trigger: AAACTTTGCATAGAATCCTCACGCAAGTAGATACAT...GAGTGAAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR TCA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGAAAAGCAGGTTAATTTaGTCTTTCCACCCACACCTT +
Preference number: 4 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVKSRLI*SFHPHL
Trigger: AAGGTGTGGGTGGAAAGATCAAATTAACCTGCTTTT...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR TCA 90 bp AGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCTTTCAACAATCCCAAGTGCTCTaGATCTTATTTCTTACCAAT +
Preference number: 4 (lower is better)
Translates to: RRMLTINHAGLTVIISFQQSQVL*ILFLTN
Trigger: ATTGGTAAGAAATAAGATTCAGAGCACTTGGGATTG...TTGAAAGGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR TCA 90 bp GACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTAACATGACGAAACACTaGAAATTATCATCATCTGCC +
Preference number: 4 (lower is better)
Translates to: DSTYFRVSPTLKTVITNFNMTKH*KLSSSA
Trigger: GGCAGATGATGATAATTTTCAGTGTTTCGTCATGTT...AAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR TCA 90 bp AGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCTTTCAAAACATGACGAAACACTaGAAATTATCATCATCTGCC +
Preference number: 4 (lower is better)
Translates to: RRMLTINHAGLTVIISFQNMTKH*KLSSSA
Trigger: GGCAGATGATGATAATTTTCAGTGTTTCGTCATGTT...TTGAAAGGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR TCA 90 bp CAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCACTCTCATGTAAGCTGTCTAAAAGTATGTaGTCAGAACTTGCCACATAT +
Preference number: 4 (lower is better)
Translates to: QSESHSQNSHNKFSLSCKLSKSM*SELATY
Trigger: ATATGTGGCAAGTTCTGATCACATACTTTTAGACAG...CTTACATGAGAGTGAAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp ACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATGCATGAAAAAGATCCTGAATTaGAGCTCAAATGGTTACCTA +
Preference number: 4 (lower is better)
Translates to: TPCWRYNVSIHCVSIICMKKILN*SSNGYL
Trigger: TAGGTAACCATTTGAGCTGCAATTCAGGATCTTTTT...CATGCATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp ACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATGCATGTACACTTATTTGAAATaGTGGGTAAATGTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: TPCWRYNVSIHCVSIICMYTYLK*WVNVPK
Trigger: TTTGGGCACATTTACCCAGCATTTCAAATAAGTGTA...CATGCATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp TTTACTATTCTCCTTTTGGGGGTTCCTAGAAATCAATACATACACTTGGTTTGGTTCTGCAGACTTTCTTaGATATGGTTAAGCCCAATC +
Preference number: 4 (lower is better)
Translates to: FTILLLGVPRNQYIHLVWFCRLS*IWLSPI
Trigger: GATTGGGCTTAACCATATGCAAGAAAGTCTGCAGAA...CCAAACCAAGTGTATGTATTGATTTCTAGGAACCCCCAAAAGGAGAATAGTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp AGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCTTTCAAAGGAGCCAGTTTATATaGGTGAGAATGAATGTTTCT +
Preference number: 4 (lower is better)
Translates to: RRMLTINHAGLTVIISFQRSQFI*VRMNVS
Trigger: AGAAACATTCATTCTCACGCATATAAACTGGCTCCT...TTGAAAGGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CCA 90 bp CAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCACTCTCATGTAAGCTACACAGGGCCACATaGGTAAATATATATGTATTG +
Preference number: 4 (lower is better)
Translates to: QSESHSQNSHNKFSLSCKLHRAT*VNIYVL
Trigger: CAATACATATATATTTACCCATGTGGCCCTGTGTAG...CTTACATGAGAGTGAAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR GCA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGGAACATGTATCTACTTaGGTGAGGATTCTATGCAAA +
Preference number: 4 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVEHVST*VRILCK
Trigger: TTTGCATAGAATCCTCACGCAAGTAGATACATGTTC...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR GCA 90 bp AATTTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTTGGCTGGTTTGGGGATaGTATTTACAAAAATGTATA +
Preference number: 4 (lower is better)
Translates to: NLIFPPTPCWRYNVSIHCWLVWG*YLQKCI
Trigger: TATACATTTTTGTAAATAGCATCCCCAAACCAGCCA...ACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR CCA 90 bp GACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTATCAAAAACCTGGACTaGATTCAACAAGATCCTAAA +
Preference number: 4 (lower is better)
Translates to: DSTYFRVSPTLKTVITNFIKNLD*IQQDPK
Trigger: TTTAGGATCTTGTTGAATCCAGTCCAGGTTTTTGAT...AAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp CTGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGTTACATCAAAAACCTaGACTGGATTCAACAAGATC +
Preference number: 4 (lower is better)
Translates to: LAGLGMLFTKMYTHYTTSVTSKT*TGFNKI
Trigger: GATCTTGTTGAATCCAGTCCAGGTTTTTGATGTAAC...ACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp CAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCACTCTCATGTAAGTTACTATTCTCCTTTTaGGGGTTCCTAGAAATCAAT +
Preference number: 4 (lower is better)
Translates to: QSESHSQNSHNKFSLSCKLLFSF*GFLEIN
Trigger: ATTGATTTCTAGGAACCCCCAAAAGGAGAATAGTAA...CTTACATGAGAGTGAAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp AATTTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGAATTGCAGCTCAAATaGTTACCTACAGAATTAAAC +
Preference number: 4 (lower is better)
Translates to: NLIFPPTPCWRYNVSIHCELQLK*LPTELN
Trigger: GTTTAATTCTGTAGGTAACCATTTGAGCTGCAATTC...ACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp CAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCACTCTCATGTAAGGAATTGCAGCTCAAATaGTTACCTACAGAATTAAAC +
Preference number: 4 (lower is better)
Translates to: QSESHSQNSHNKFSLSCKELQLK*LPTELN
Trigger: GTTTAATTCTGTAGGTAACCATTTGAGCTGCAATTC...CTTACATGAGAGTGAAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp CTGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGCAAACTTAGGTTTATaGCAATTCATGGATGACAGA +
Preference number: 4 (lower is better)
Translates to: LAGLGMLFTKMYTHYTTSANLGL*QFMDDR
Trigger: TCTGTCATCCATGAATTGCCATAAACCTAAGTTTGC...ACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp TTTACTATTCTCCTTTTGGGGGTTCCTAGAAATCAATACATACACTTGGTTTGGTGGCTGGTTTGGGGATaGTATTTACAAAAATGTATA +
Preference number: 4 (lower is better)
Translates to: FTILLLGVPRNQYIHLVWWLVWG*YLQKCI
Trigger: TATACATTTTTGTAAATAGCATCCCCAAACCAGCCA...CCAAACCAAGTGTATGTATTGATTTCTAGGAACCCCCAAAAGGAGAATAGTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR GCA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGTACACTTATTTGAAATaGTGGGTAAATGTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVYTYLK*WVNVPK
Trigger: TTTGGGCACATTTACCCAGCATTTCAAATAAGTGTA...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CCA 90 bp TTTACTATTCTCCTTTTGGGGGTTCCTAGAAATCAATACATACACTTGGTTTGGATCAAAAACCTGGACTaGATTCAACAAGATCCTAAA +
Preference number: 4 (lower is better)
Translates to: FTILLLGVPRNQYIHLVWIKNLD*IQQDPK
Trigger: TTTAGGATCTTGTTGAATCCAGTCCAGGTTTTTGAT...CCAAACCAAGTGTATGTATTGATTTCTAGGAACCCCCAAAAGGAGAATAGTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS TCA 90 bp GCCGCCTCGCGCAGGAGGAGAACGACGCTGGGCCGCCAGCAGGGATaGAGCCGGGCGGGGGAAACGCTTAAGGCTCCAGCCGCACGCACG +
Preference number: 5 (lower is better)
Translates to: AASRRRRTTLGRQQG*SRAGETLKAPAART
Trigger: CGTGCGTGCGGCTGGAGCCTTAAGCGTTTCCCCCGCCCGGCTTCATCCCTGCTGGCGGCCCAGCGTCGTTCTCCTCCTGCGCGAGGCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS GCA 90 bp ATGAACACCGGCAGCAGGACCGAGCACAGCGTCCACAAGATCAGGTaGCCGTCCGCAAACAGGCCCTCGGAGGGCGAGCCCGGCGCCGGC +
Preference number: 5 (lower is better)
Translates to: MNTGSRTEHSVHKIR*PSANRPSEGEPGAG
Trigger: GCCGGCGCCGGGCTCGCCCTCCGAGGGCCTGTTTGCGGACGGGCACCTGATCTTGTGGACGCTGTGCTCGGTCCTGCTGCCGGTGTTCAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000576869.5
CDS GCA 90 bp GGTCCGTGTCGCGCCACCCGTGCTTGCTCTTGCGGAAGATGTCCCTaGGGTGCAGCTGCCGGCGCGACCGCTGGAGGCTACACCAGAAGG +
Preference number: 5 (lower is better)
Translates to: GPCRATRACSCGRCP*GAAAGATAGGYTRR
Trigger: CCTTCTGGTGTAGCCTCCAGCGGTCGCGCCGGCAGCTGCACCGCAGGGACATCTTCCGCAAGAGCAAGCACGGGTGGCGCGACACGGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000576869.5
CDS GCA 90 bp GTGTCGCGCCACCCGTGCTTGCTCTTGCGGAAGATGTCCCTGCGGTaGAGCTGCCGGCGCGACCGCTGGAGGCTACACCAGAAGGTGATG +
Preference number: 5 (lower is better)
Translates to: VSRHPCLLLRKMSLR*SCRRDRWRLHQKVM
Trigger: CATCACCTTCTGGTGTAGCCTCCAGCGGTCGCGCCGGCAGCTGCACCGCAGGGACATCTTCCGCAAGAGCAAGCACGGGTGGCGCGACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000576869.5
CDS GCA 90 bp CGCCACCCGTGCTTGCTCTTGCGGAAGATGTCCCTGCGGTGCAGCTaGCGGCGCGACCGCTGGAGGCTACACCAGAAGGTGATGAACACC +
Preference number: 5 (lower is better)
Translates to: RHPCLLLRKMSLRCS*RRDRWRLHQKVMNT
Trigger: GGTGTTCATCACCTTCTGGTGTAGCCTCCAGCGGTCGCGCCGGCAGCTGCACCGCAGGGACATCTTCCGCAAGAGCAAGCACGGGTGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000576869.5
CDS CCA 90 bp CTCTTGCGGAAGATGTCCCTGCGGTGCAGCTGCCGGCGCGACCGCTaGAGGCTACACCAGAAGGTGATGAACACCGGCAGCAGGACCGAG +
Preference number: 5 (lower is better)
Translates to: LLRKMSLRCSCRRDR*RLHQKVMNTGSRTE
Trigger: CTCGGTCCTGCTGCCGGTGTTCATCACCTTCTGGTGTAGCCTCCAGCGGTCGCGCCGGCAGCTGCACCGCAGGGACATCTTCCGCAAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000576869.5
CDS-3UTR CAA 90 bp AGGCTGGATGCCCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTTTGCACTGGAAGCGCTaGTCGGCCTTCCTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: RLDALWVSRPVGHDPWAGLHWKR*SAFLRQ
Trigger: CTGCCTCAGGAAGGCCGACAAGCGCTTCCAGTGCAA...ACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGGGCATCCAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp GGTGGGCAGGGGAAAGTGCAAGAGGCCAGCTGGCTGAGCAAGTGGAGTCATCACCACCCGTGCTTGCTCTaGCGGAAGATGTCCCTGCGG +
Preference number: 5 (lower is better)
Translates to: GGQGKVQEASWLSKWSHHHPCLL*RKMSLR
Trigger: CCGCAGGGACATCTTCCGCAAGAGCAAGCACGGGTG...GTGATGACTCCACTTGCTCAGCCAGCTGGCCTCTTGCACTTTCCCCTGCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CAA 90 bp CCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTCAACAGCAGCGCCCCATCCACCTGCATaGGCATCATGGAGCACTTCA +
Preference number: 5 (lower is better)
Translates to: PLGQPTCGSRPLGWSTAAPHPPA*ASWSTS
Trigger: TGAAGTGCTCCATGATGCCAATGCAGGTGGATGGGG...CGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp CCTCTGGGTCAGCCGACCTGTGGGTCACGACCCTTGGGCTGGTCAACAGCAGCGTCTTACCTTCGTTGCTaGCCCAGCTCCTGTAAGCAC +
Preference number: 5 (lower is better)
Translates to: PLGQPTCGSRPLGWSTAASYLRC*PSSCKH
Trigger: GTGCTTACAGGAGCTGGGCAAGCAACGAAGGTAAGA...CGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCACAGGTCGGCTGACCCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS GCA 90 bp CACACTGCTGCTTGCAAACCATACAGTAACTGCACAGGGGCACGTTaGCCCGGATCCAGTGGTGGGGCATGGCGTCCAGGACCTTGGTGT +
Preference number: 5 (lower is better)
Translates to: HTAACKPYSNCTGAR*PGSSGGAWRPGPWC
Trigger: ACACCAAGGTCCTGGACGCCATGCCCCACCACTGGATCCGGGGCAACGTGCCCCTGTGCAGTTACTGTATGGTTTGCAAGCAGCAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000572944.1
ENST00000576869.5
CDS-3UTR CAA 90 bp TCTTTGGCCCAGGCCCCACTGCAGTGGCACTATCTCGGCTCGCTGCAAGCTCCGATCGCAAAGCTTGGGTaGACAGCCACACTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: SLAQAPLQWHYLGSLQAPIAKLG*TATLLL
Trigger: AAGCAGCAGTGTGGCTGTCAACCCAAGCTTTGCGAT...CGGAGCTTGCAGCGAGCCGAGATAGTGCCACTGCAGTGGGGCCTGGGCCAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS GCA 90 bp TGCACCTGTAATCGCAAAGCTTGGGTTGACAGCCACACTGCTGCTTaGAAACCATACAGTAACTGCACAGGGGCACGTTGCCCCGGATCC +
Preference number: 5 (lower is better)
Translates to: CTCNRKAWVDSHTAA*KPYSNCTGARCPGS
Trigger: GGATCCGGGGCAACGTGCCCCTGTGCAGTTACTGTATGGTTTGCAAGCAGCAGTGTGGCTGTCAACCCAAGCTTTGCGATTACAGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000572944.1
ENST00000576869.5
CDS-3UTR CAA 90 bp TCGTCTCAGCAAATGACTACTGCAAAGCTGCCACGCTTGCACAAACTCAGGGATTCGCGCCACCCGTGCTaGCTCTTGCGGAAGATGTCC +
Preference number: 5 (lower is better)
Translates to: SSQQMTTAKLPRLHKLRDSRHPC*LLRKMS
Trigger: GGACATCTTCCGCAAGAGCAAGCACGGGTGGCGCGA...ATCCCTGAGTTTGTGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGAGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CAA 90 bp AGAAGGCAGGCGCCTCCATGGCTCACTGCCCCTTGGAGGCGCACTGCACTAACTACCTTGGTGTCATTCTaGAGCATAATCTCCTTGCAC +
Preference number: 5 (lower is better)
Translates to: RRQAPPWLTAPWRRTALTTLVSF*SIISLH
Trigger: GTGCAAGGAGATTATGCTCAAGAATGACACCAAGGT...AGTTAGTGCAGTGCGCCTCCAAGGGGCAGTGAGCCATGGAGGCGCCTGCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS GCA 90 bp CATACCTGTAATCGCAAAGCTTGGGTTGACAGCCACACTGCTGCTTaGAAACCATACAGTAACTGCACAGGGGCACGTTGCCCCGGATCC +
Preference number: 5 (lower is better)
Translates to: HTCNRKAWVDSHTAA*KPYSNCTGARCPGS
Trigger: GGATCCGGGGCAACGTGCCCCTGTGCAGTTACTGTATGGTTTGCAAGCAGCAGTGTGGCTGTCAACCCAAGCTTTGCGATTACAGGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CAA 90 bp TGCTGCAGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCCTGCACAGGGGCACGTaGCCCCGGATCCAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: CCRRMLTINHAGLTVIISLHRGT*PRIQWW
Trigger: CCACCACTGGATCCGGGGCAACGTGCCCCTGTGCAG...GGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp AACATTGTGGGTTTAGGGATCCAGTGCAATCAGTTCACTTCTAAGAGGACTGGGTCGCGCCACCCGTGCTaGCTCTTGCGGAAGATGTCC +
Preference number: 5 (lower is better)
Translates to: NIVGLGIQCNQFTSKRTGSRHPC*LLRKMS
Trigger: GGACATCTTCCGCAAGAGCAAGCACGGGTGGCGCGA...CCCAGTCCTCTTAGAAGTGAACTGATTGCACTGGATCCCTAAACCCACAATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CAA 90 bp GAACAAAAGCTAAAATATACAGTGGCCATGAAGCAGGCACCACTTAGAAACCTCCTGCACAGGGGCACGTaGCCCCGGATCCAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: EQKLKYTVAMKQAPLRNLLHRGT*PRIQWW
Trigger: CCACCACTGGATCCGGGGCAACGTGCCCCTGTGCAG...GAGGTTTCTAAGTGGTGCCTGCTTCATGGCCACTGTATATTTTAGCTTTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CAA 90 bp TCTTTGGCCCAGGCCCCACTGCAGTGGCACTATCTCGGCTCGCTGCAAGCTCCGTTTACTATTCTCCTTTaGGGGGTTCCTAGAAATCAA +
Preference number: 5 (lower is better)
Translates to: SLAQAPLQWHYLGSLQAPFTILL*GVPRNQ
Trigger: TTGATTTCTAGGAACCCCCAAAAGGAGAATAGTAAA...CGGAGCTTGCAGCGAGCCGAGATAGTGCCACTGCAGTGGGGCCTGGGCCAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS TCA 90 bp CTCCAGAGAAATATAACATCATTGCATGTGTCTTGTGAGTTATGGTaGCAGTGCAGGGCCCTTGGGCCCAAGGCTCCCCATCCACCCTCA +
Preference number: 5 (lower is better)
Translates to: LQRNITSLHVSCELW*QCRALGPKAPHPPS
Trigger: TGAGGGTGGATGGGGAGCCTTGGGCCCAAGGGCCCTGCACTGTCACCATAACTCACAAGACACATGCAATGATGTTATATTTCTCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570738.1
CDS-3UTR CAA 90 bp CTGGCTGAGGAGTGGAGGCTGGATGCATCGTCTCAGCAAATGACTACTGCAAAGAAAGTCCCTGCTAACTaGGCTCTCACTGATGCCAGA +
Preference number: 5 (lower is better)
Translates to: LAEEWRLDASSQQMTTAKKVPAN*ALTDAR
Trigger: TCTGGCATCAGTGAGAGCCAAGTTAGCAGGGACTTT...CTTTGCAGTAGTCATTTGCTGAGACGATGCATCCAGCCTCCACTCCTCAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS CCA 90 bp GGGACAGTGAGTGTCCACGAAGACCATACCTGTAATCGCAAAGCTTaGGTTGACAGCCACACTGCTGCTTGCAAACCATACAGTAACTGC +
Preference number: 5 (lower is better)
Translates to: GTVSVHEDHTCNRKA*VDSHTAACKPYSNC
Trigger: GCAGTTACTGTATGGTTTGCAAGCAGCAGTGTGGCTGTCAACCCAAGCTTTGCGATTACAGGTATGGTCTTCGTGGACACTCACTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CAA 90 bp GAACAAAAGCTAAAATATACAGTGGCCATGAAGCAGGCACCACTTAGAAACCTCCACCCGTGCTTGCTCTaGCGGAAGATGTCCCTGCGG +
Preference number: 5 (lower is better)
Translates to: EQKLKYTVAMKQAPLRNLHPCLL*RKMSLR
Trigger: CCGCAGGGACATCTTCCGCAAGAGCAAGCACGGGTG...GAGGTTTCTAAGTGGTGCCTGCTTCATGGCCACTGTATATTTTAGCTTTTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CAA 90 bp TCGTCTCAGCAAATGACTACTGCAAAGCTGCCACGCTTGCACAAACTCAGGGATTTGAGCATAATCTCCTaGCACTGGAAGCGCTTGTCG +
Preference number: 5 (lower is better)
Translates to: SSQQMTTAKLPRLHKLRDLSIIS*HWKRLS
Trigger: CGACAAGCGCTTCCAGTGCAAGGAGATTATGCTCAA...ATCCCTGAGTTTGTGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGAGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CAA 90 bp TCGTCTCAGCAAATGACTACTGCAAAGCTGCCACGCTTGCACAAACTCAGGGATATGGCGTCCAGGACCTaGGTGTCATTCTTGAGCATA +
Preference number: 5 (lower is better)
Translates to: SSQQMTTAKLPRLHKLRDMASRT*VSFLSI
Trigger: TATGCTCAAGAATGACACCAAGGTCCTGGACGCCAT...ATCCCTGAGTTTGTGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGAGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CAA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGCTGCACAGGGGCACGTaGCCCCGGATCCAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVLHRGT*PRIQWW
Trigger: CCACCACTGGATCCGGGGCAACGTGCCCCTGTGCAG...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp CACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATATGGCTCACTGCCCCTaGGAGGCGCACTGCACTAAC +
Preference number: 5 (lower is better)
Translates to: HPHLVGDIMCPSIVCPSYMAHCP*EAHCTN
Trigger: GTTAGTGCAGTGCGCCTCCAAGGGGCAGTGAGCCAT...ATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS TCA 90 bp TTTAGGTCATCAGCAGAGATTAAAGCAGGCCTCTACACCACTCTATaGAATCCTGATTCCCACGGCGCATTCTGGGACAGTGAGTGTCCA +
Preference number: 5 (lower is better)
Translates to: FRSSAEIKAGLYTTL*NPDSHGAFWDSECP
Trigger: TGGACACTCACTGTCCCAGAATGCGCCGTGGGAATCAGGATTTCATAGAGTGGTGTAGAGGCCTGCTTTAATCTCTGCTGATGACCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CAA 90 bp CACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCACTCTGTGGGTCACGACCCTaGGGCTGGTCAACAGCAGCG +
Preference number: 5 (lower is better)
Translates to: HILQSESHSQNSHNKFSLCGSRP*GWSTAA
Trigger: CGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCACA...GAGTGAAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp TCGTCTCAGCAAATGACTACTGCAAAGCTGCCACGCTTGCACAAACTCAGGGATACCTTGGTGTCATTCTaGAGCATAATCTCCTTGCAC +
Preference number: 5 (lower is better)
Translates to: SSQQMTTAKLPRLHKLRDTLVSF*SIISLH
Trigger: GTGCAAGGAGATTATGCTCAAGAATGACACCAAGGT...ATCCCTGAGTTTGTGCAAGCGTGGCAGCTTTGCAGTAGTCATTTGCTGAGACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CAA 90 bp CTGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTTGTGGGTCACGACCCTaGGGCTGGTCAACAGCAGCG +
Preference number: 5 (lower is better)
Translates to: LAGLGMLFTKMYTHYTTSCGSRP*GWSTAA
Trigger: CGCTGCTGTTGACCAGCCCAAGGGTCGTGACCCACA...ACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp GAACAAAAGCTAAAATATACAGTGGCCATGAAGCAGGCACCACTTAGAAACCTCATCGCAAAGCTTGGGTaGACAGCCACACTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: EQKLKYTVAMKQAPLRNLIAKLG*TATLLL
Trigger: AAGCAGCAGTGTGGCTGTCAACCCAAGCTTTGCGAT...GAGGTTTCTAAGTGGTGCCTGCTTCATGGCCACTGTATATTTTAGCTTTTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS-3UTR CAA 90 bp TTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGATCGCAAAGCTTGGGTaGACAGCCACACTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: LIFPPTPCWRYNVSIHCVIAKLG*TATLLL
Trigger: AAGCAGCAGTGTGGCTGTCAACCCAAGCTTTGCGAT...CACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp CCCAGGAATCATGTGCTCCAGTTTACCGAAGTCTCTACAACTCTTACCTTCGTTCCCCAACCCAATGTATaGGATAGATCGTTGCCTGTT +
Preference number: 5 (lower is better)
Translates to: PRNHVLQFTEVSTTLTFVPQPNV*DRSLPV
Trigger: AACAGGCAACGATCTATCCAATACATTGGGTTGGGG...AACGAAGGTAAGAGTTGTAGAGACTTCGGTAAACTGGAGCACATGATTCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CAA 90 bp GACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCTAAGAGGACTGGGGTaGAGGACTCGAGCTAGGCTG +
Preference number: 5 (lower is better)
Translates to: DSTYFRVSPTLKTVITNFLRGLG*RTRARL
Trigger: CAGCCTAGCTCGAGTCCTCAACCCCAGTCCTCTTAG...AAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS GCA 90 bp CTCCAGCATAACCTGTACCCCAACCCAATGTATTGGATAGATCGTTaGCTGTTCCCAGAGGCAAAACTGCAACTTGTGGAATGTACTTTT +
Preference number: 5 (lower is better)
Translates to: LQHNLYPNPMYWIDR*LFPEAKLQLVECTF
Trigger: AAAAGTACATTCCACAAGTTGCAGTTTTGCCTCTGGGAACAGGCAACGATCTATCCAATACATTGGGTTGGGGTACAGGTTATGCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp TTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTTGAGCATAATCTCCTaGCACTGGAAGCGCTTGTCG +
Preference number: 5 (lower is better)
Translates to: LIFPPTPCWRYNVSIHCVLSIIS*HWKRLS
Trigger: CGACAAGCGCTTCCAGTGCAAGGAGATTATGCTCAA...CACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp ATCCACCTGCATTGGCATCATGGAGCACTTCAAAATCAGCTGATATTAGGGAACAGCCCTTCAGTAAGTTaGTGGCAATTGAGGGGCAAA +
Preference number: 5 (lower is better)
Translates to: IHLHWHHGALQNQLILGNSPSVS*WQLRGK
Trigger: TTTGCCCCTCAATTGCCACAAACTTACTGAAGGGCT...GTTCCCTAATATCAGCTGATTTTGAAGTGCTCCATGATGCCAATGCAGGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572944.1
CDS-3UTR CAA 90 bp AACATTGTGGGTTTAGGGATCCAGTGCAATCAGTTCACTTCTAAGAGGACTGGGACAGAGATTTCTATGTaGCATCTCCAGAGACAGGGA +
Preference number: 5 (lower is better)
Translates to: NIVGLGIQCNQFTSKRTGTEISM*HLQRQG
Trigger: TCCCTGTCTCTGGAGATGCAACATAGAAATCTCTGT...CCCAGTCCTCTTAGAAGTGAACTGATTGCACTGGATCCCTAAACCCACAATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CAA 90 bp ACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATGCATGTTGAGCATAATCTCCTaGCACTGGAAGCGCTTGTCG +
Preference number: 5 (lower is better)
Translates to: TPCWRYNVSIHCVSIICMLSIIS*HWKRLS
Trigger: CGACAAGCGCTTCCAGTGCAAGGAGATTATGCTCAA...CATGCATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp TTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGGTTCCACTACGAGAGTaGGCCAGGATTATTAATGGG +
Preference number: 5 (lower is better)
Translates to: LIFPPTPCWRYNVSIHCVVPLRE*ARIING
Trigger: CCCATTAATAATCCTGGCCAACTCTCGTAGTGGAAC...CACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGCCCCATCCACCTGCATaGGCATCATGGAGCACTTCA +
Preference number: 5 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVPHPPA*ASWSTS
Trigger: TGAAGTGCTCCATGATGCCAATGCAGGTGGATGGGG...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp CACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATAGCCCTTCAGTAAGTTaGTGGCAATTGAGGGGCAAA +
Preference number: 5 (lower is better)
Translates to: HPHLVGDIMCPSIVCPSYSPSVS*WQLRGK
Trigger: TTTGCCCCTCAATTGCCACAAACTTACTGAAGGGCT...ATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp AATTTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTACAAGTGTGGCTGCATaGACTGCAGTGAGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: NLIFPPTPCWRYNVSIHCTSVAA*TAVRRQ
Trigger: CTGCCTTCTCACTGCAGTCAATGCAGCCACACTTGT...ACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CAA 90 bp TTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCTTGCCACATATATGTTaGCCCTGCTGTAGACCAAGA +
Preference number: 5 (lower is better)
Translates to: FPPTPCWRYNVSIHCVSILPHIC*PCCRPR
Trigger: TCTTGGTCTACAGCAGGGCAAACATATATGTGGCAA...GATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CAA 90 bp CACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCACTCATGGCGTCCAGGACCTaGGTGTCATTCTTGAGCATA +
Preference number: 5 (lower is better)
Translates to: HILQSESHSQNSHNKFSLMASRT*VSFLSI
Trigger: TATGCTCAAGAATGACACCAAGGTCCTGGACGCCAT...GAGTGAAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp AGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCTTTCAAATGGCGTCCAGGACCTaGGTGTCATTCTTGAGCATA +
Preference number: 5 (lower is better)
Translates to: RRMLTINHAGLTVIISFQMASRT*VSFLSI
Trigger: TATGCTCAAGAATGACACCAAGGTCCTGGACGCCAT...TTGAAAGGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp CCCAGGAATCATGTGCTCCAGTTTACCGAAGTCTCTACAACTCTTACCTTCGTTTTAGTGCATTCTGTGTaGATGTCGTCCTTTAACAGT +
Preference number: 5 (lower is better)
Translates to: PRNHVLQFTEVSTTLTFVLVHSV*MSSFNS
Trigger: ACTGTTAAAGGACGACATCAACACAGAATGCACTAA...AACGAAGGTAAGAGTTGTAGAGACTTCGGTAAACTGGAGCACATGATTCCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CAA 90 bp TTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCGTATGTGATCAGAACTaGCCACATATATGTTTGCCC +
Preference number: 5 (lower is better)
Translates to: FPPTPCWRYNVSIHCVSIVCDQN*PHICLP
Trigger: GGGCAAACATATATGTGGCAAGTTCTGATCACATAC...GATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS CCA 90 bp TTTAATTCCATCTGCTTCCATTACATTTCGCAAAACCTGCGCAACTaGAATTTCTCCAGCATAACCTGTACCCCAACCCAATGTATTGGA +
Preference number: 5 (lower is better)
Translates to: FNSICFHYISQNLRN*NFSSITCTPTQCIG
Trigger: TCCAATACATTGGGTTGGGGTACAGGTTATGCTGGAGAAATTCCAGTTGCGCAGGTTTTGCGAAATGTAATGGAAGCAGATGGAATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp GACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTGTTCCACTACGAGAGTaGGCCAGGATTATTAATGGG +
Preference number: 5 (lower is better)
Translates to: DSTYFRVSPTLKTVITNFVPLRE*ARIING
Trigger: CCCATTAATAATCCTGGCCAACTCTCGTAGTGGAAC...AAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp TGCTGCAGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCAGGCAAAACTGCAACTaGTGGAATGTACTTTTCTTG +
Preference number: 5 (lower is better)
Translates to: CCRRMLTINHAGLTVIISRQNCN*WNVLFL
Trigger: CAAGAAAAGTACATTCCACAAGTTGCAGTTTTGCCT...GGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCTGCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp AGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCTTTCAACCCCAACCCAATGTATaGGATAGATCGTTGCCTGTT +
Preference number: 5 (lower is better)
Translates to: RRMLTINHAGLTVIISFQPQPNV*DRSLPV
Trigger: AACAGGCAACGATCTATCCAATACATTGGGTTGGGG...TTGAAAGGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp TTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCTTTCTGCAGACTTTCTaGCATATGGTTAAGCCCAAT +
Preference number: 5 (lower is better)
Translates to: FPPTPCWRYNVSIHCVSIFLQTF*HMVKPN
Trigger: ATTGGGCTTAACCATATGCAAGAAAGTCTGCAGAAA...GATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CAA 90 bp TGCTGCAGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCATCAACAGCTTAGAATaGGATTGGGACAAATTAGCC +
Preference number: 5 (lower is better)
Translates to: CCRRMLTINHAGLTVIISINSLE*DWDKLA
Trigger: GGCTAATTTGTCCCAATCCAATTCTAAGCTGTTGAT...GGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCTGCAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572944.1
CDS-3UTR CAA 90 bp CAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCACTCTCATGTAAGACCTTGGTGTCATTCTaGAGCATAATCTCCTTGCAC +
Preference number: 5 (lower is better)
Translates to: QSESHSQNSHNKFSLSCKTLVSF*SIISLH
Trigger: GTGCAAGGAGATTATGCTCAAGAATGACACCAAGGT...CTTACATGAGAGTGAAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp CACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATCGCCTTTATATCTTCTaGATCCGAAGTACTAGAGAT +
Preference number: 5 (lower is better)
Translates to: HPHLVGDIMCPSIVCPSYRLYIF*IRSTRD
Trigger: ATCTCTAGTACTTCGGATCAAGAAGATATAAAGGCG...ATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR CAA 90 bp TTGATCTTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGCGCCTTTATATCTTCTaGATCCGAAGTACTAGAGAT +
Preference number: 5 (lower is better)
Translates to: LIFPPTPCWRYNVSIHCVRLYIF*IRSTRD
Trigger: ATCTCTAGTACTTCGGATCAAGAAGATATAAAGGCG...CACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAAGATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR CAA 90 bp CACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCATATCAATTAATCTCACCGTaGTCTCCTTTAAGCACGTTT +
Preference number: 5 (lower is better)
Translates to: HPHLVGDIMCPSIVCPSYQLISP*SPLSTF
Trigger: AAACGTGCTTAAAGGAGACAACGGTGAGATTAATTG...ATATGATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp TTTCCACCCACACCTTGTTGGAGATATAATGTGTCCATCCATTGTGTGTCCATCTTTATCTCATGGATCTaGAGCCATGTTTCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: FPPTPCWRYNVSIHCVSIFISWI*SHVSVS
Trigger: AGAAACAGAAACATGGCTCAAGATCCATGAGATAAA...GATGGACACACAATGGATGGACACATTATATCTCCAACAAGGTGTGGGTGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572944.1
CDS-3UTR CAA 90 bp CACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCACTCCAGAGTTGTAGGGCTTaGATAGGAGGAGTTTTAGTT +
Preference number: 5 (lower is better)
Translates to: HILQSESHSQNSHNKFSLQSCRA*IGGVLV
Trigger: AACTAAAACTCCTCCTATCAAAGCCCTACAACTCTG...GAGTGAAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp CACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCACTCTTACTAAGTTGCTCTTaGAAAACATGGTCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: HILQSESHSQNSHNKFSLLLSCS*KTWSGP
Trigger: AGGCCCAGACCATGTTTTCAAAGAGCAACTTAGTAA...GAGTGAAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp CATCTATTCAGTCGCCTTTATATCTTCTTGATCCGAAGTACTAGAGATGTCATCTTACTAAGTTGCTCTTaGAAAACATGGTCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: HLFSRLYIFLIRSTRDVILLSCS*KTWSGP
Trigger: AGGCCCAGACCATGTTTTCAAAGAGCAACTTAGTAA...GATGACATCTCTAGTACTTCGGATCAAGAAGATATAAAGGCGACTGAATAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572944.1
CDS-3UTR CAA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGCAGAGTTGTAGGGCTTaGATAGGAGGAGTTTTAGTT +
Preference number: 5 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVQSCRA*IGGVLV
Trigger: AACTAAAACTCCTCCTATCAAAGCCCTACAACTCTG...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp GACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTAGGCAAAACTGCAACTaGTGGAATGTACTTTTCTTG +
Preference number: 5 (lower is better)
Translates to: DSTYFRVSPTLKTVITNFRQNCN*WNVLFL
Trigger: CAAGAAAAGTACATTCCACAAGTTGCAGTTTTGCCT...AAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp GACAGCACATACTTCAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCGCCTTTATATCTTCTaGATCCGAAGTACTAGAGAT +
Preference number: 5 (lower is better)
Translates to: DSTYFRVSPTLKTVITNFRLYIF*IRSTRD
Trigger: ATCTCTAGTACTTCGGATCAAGAAGATATAAAGGCG...AAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTGAAGTATGTGCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000570738.1
ENST00000572944.1
CDS-3UTR CAA 90 bp CAGAGTGAGTCCCACTCTCAAAACAGTCATAACAAATTTTCACTCTCATGTAAGCAATTAATCTCACCGTaGTCTCCTTTAAGCACGTTT +
Preference number: 5 (lower is better)
Translates to: QSESHSQNSHNKFSLSCKQLISP*SPLSTF
Trigger: AAACGTGCTTAAAGGAGACAACGGTGAGATTAATTG...CTTACATGAGAGTGAAAATTTGTTATGACTGTTTTGAGAGTGGGACTCACTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS-3UTR CAA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGAAGGTGAATTCACCTTaGATCCCACTTACTGCTCTA +
Preference number: 5 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVKVNSP*IPLTAL
Trigger: TAGAGCAGTAAGTGGGATCAAAGGTGAATTCACCTT...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CAA 90 bp AGGAGGATGCTCACAATTAACCATGCTGGTTTGACAGTAATCATTTCCTTTCAACAGCTTAGAATTGGATaGGGACAAATTAGCCTGTTA +
Preference number: 5 (lower is better)
Translates to: RRMLTINHAGLTVIISFQQLRIG*GQISLL
Trigger: TAACAGGCTAATTTGTCCCAATCCAATTCTAAGCTG...TTGAAAGGAAATGATTACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572944.1
CDS-3UTR CAA 90 bp TGGCTGGTTTGGGGATGCTATTTACAAAAATGTATACCCATTATACTACTAGTGAGTCAAAGCTGCTTATaGTATCTCATGGTTGTGTCA +
Preference number: 5 (lower is better)
Translates to: WLVWGCYLQKCIPIILLVSQSCL*YLMVVS
Trigger: TGACACAACCATGAGATACAATAAGCAGCTTTGACT...CACTAGTAGTATAATGGGTATACATTTTTGTAAATAGCATCCCCAAACCAGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS-3UTR CAA 90 bp TTTACTATTCTCCTTTTGGGGGTTCCTAGAAATCAATACATACACTTGGTTTGGTTTACTATTCTCCTTTaGGGGGTTCCTAGAAATCAA +
Preference number: 5 (lower is better)
Translates to: FTILLLGVPRNQYIHLVWFTILL*GVPRNQ
Trigger: TTGATTTCTAGGAACCCCCAAAAGGAGAATAGTAAA...CCAAACCAAGTGTATGTATTGATTTCTAGGAACCCCCAAAAGGAGAATAGTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS CAA 90 bp ACGATACCTCGCGCGGGTGGAGGCGCGGCTCCGGGCCAGCAGGCCTaGGCCGCCTCGCGCAGGAGGAGAACGACGCTGGGCCGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: TIPRAGGGAAPGQQA*AASRRRRTTLGRQQ
Trigger: CTGCTGGCGGCCCAGCGTCGTTCTCCTCCTGCGCGAGGCGGCCAAGGCCTGCTGGCCCGGAGCCGCGCCTCCACCCGCGCGAGGTATCGT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000576869.5
CDS CCA 72 bp AGGCCTTGGCCGCCTCGCGCAGGAGGAGAACGACGCTaGGCCGCCAGCAGGGATGAAGCCGGGCGGGGGAAA +
Preference number: 6 (lower is better)
Translates to: RPWPPRAGGERR*AASRDEAGRGK
Trigger: TTTCCCCCGCCCGGCTTCATCCCTGCTGGCGGCCCAGCGTCGTTCTCCTCCTGCGCGAGGCGGCCAAGGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000576869.5
CDS GCA 72 bp CGCGCCACCCGTGCTTGCTCTTGCGGAAGATGTCCCTaGGGTGCAGCTGCCGGCGCGACCGCTGGAGGCTAC +
Preference number: 6 (lower is better)
Translates to: RATRACSCGRCP*GAAAGATAGGY
Trigger: GTAGCCTCCAGCGGTCGCGCCGGCAGCTGCACCGCAGGGACATCTTCCGCAAGAGCAAGCACGGGTGGCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000576869.5
CDS CAA 90 bp GTGGGCTGGCTGAACAGGTCCGTGTCGCGCCACCCGTGCTTGCTCTaGCGGAAGATGTCCCTGCGGTGCAGCTGCCGGCGCGACCGCTGG +
Preference number: 6 (lower is better)
Translates to: VGWLNRSVSRHPCLL*RKMSLRCSCRRDRW
Trigger: CCAGCGGTCGCGCCGGCAGCTGCACCGCAGGGACATCTTCCGCAAGAGCAAGCACGGGTGGCGCGACACGGACCTGTTCAGCCAGCCCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000576869.5
CDS TCA 72 bp CGCAGGAGGAGAACGACGCTGGGCCGCCAGCAGGGATaGAGCCGGGCGGGGGAAACGCTTAAGGCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: RRRRTTLGRQQG*SRAGETLKAPA
Trigger: GGCTGGAGCCTTAAGCGTTTCCCCCGCCCGGCTTCATCCCTGCTGGCGGCCCAGCGTCGTTCTCCTCCTGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572810.1
ENST00000576869.5
CDS GCA 72 bp GGCAGCAGGACCGAGCACAGCGTCCACAAGATCAGGTaGCCGTCCGCAAACAGGCCCTCGGAGGGCGAGCCC +
Preference number: 6 (lower is better)
Translates to: GSRTEHSVHKIR*PSANRPSEGEP
Trigger: GGGCTCGCCCTCCGAGGGCCTGTTTGCGGACGGGCACCTGATCTTGTGGACGCTGTGCTCGGTCCTGCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000576869.5
CDS GCA 72 bp CACCCGTGCTTGCTCTTGCGGAAGATGTCCCTGCGGTaGAGCTGCCGGCGCGACCGCTGGAGGCTACACCAG +
Preference number: 6 (lower is better)
Translates to: HPCLLLRKMSLR*SCRRDRWRLHQ
Trigger: CTGGTGTAGCCTCCAGCGGTCGCGCCGGCAGCTGCACCGCAGGGACATCTTCCGCAAGAGCAAGCACGGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000576869.5
CDS CAA 72 bp CTGAACAGGTCCGTGTCGCGCCACCCGTGCTTGCTCTaGCGGAAGATGTCCCTGCGGTGCAGCTGCCGGCGC +
Preference number: 6 (lower is better)
Translates to: LNRSVSRHPCLL*RKMSLRCSCRR
Trigger: GCGCCGGCAGCTGCACCGCAGGGACATCTTCCGCAAGAGCAAGCACGGGTGGCGCGACACGGACCTGTTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000576869.5
CDS GCA 72 bp GTGGGCTGGCTGAACAGGTCCGTGTCGCGCCACCCGTaGTTGCTCTTGCGGAAGATGTCCCTGCGGTGCAGC +
Preference number: 6 (lower is better)
Translates to: VGWLNRSVSRHP*LLLRKMSLRCS
Trigger: GCTGCACCGCAGGGACATCTTCCGCAAGAGCAAGCACGGGTGGCGCGACACGGACCTGTTCAGCCAGCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000576869.5
CDS CAA 72 bp GGCTGGCTGAACAGGTCCGTGTCGCGCCACCCGTGCTaGCTCTTGCGGAAGATGTCCCTGCGGTGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: GWLNRSVSRHPC*LLRKMSLRCSC
Trigger: GCAGCTGCACCGCAGGGACATCTTCCGCAAGAGCAAGCACGGGTGGCGCGACACGGACCTGTTCAGCCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000576869.5
CDS GCA 72 bp TGCTTGCTCTTGCGGAAGATGTCCCTGCGGTGCAGCTaGCGGCGCGACCGCTGGAGGCTACACCAGAAGGTG +
Preference number: 6 (lower is better)
Translates to: CLLLRKMSLRCS*RRDRWRLHQKV
Trigger: CACCTTCTGGTGTAGCCTCCAGCGGTCGCGCCGGCAGCTGCACCGCAGGGACATCTTCCGCAAGAGCAAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000576869.5
CDS CCA 72 bp AAGATGTCCCTGCGGTGCAGCTGCCGGCGCGACCGCTaGAGGCTACACCAGAAGGTGATGAACACCGGCAGC +
Preference number: 6 (lower is better)
Translates to: KMSLRCSCRRDR*RLHQKVMNTGS
Trigger: GCTGCCGGTGTTCATCACCTTCTGGTGTAGCCTCCAGCGGTCGCGCCGGCAGCTGCACCGCAGGGACATCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000576869.5
CDS GCA 72 bp GCTTGCAAACCATACAGTAACTGCACAGGGGCACGTTaGCCCGGATCCAGTGGTGGGGCATGGCGTCCAGGA +
Preference number: 6 (lower is better)
Translates to: ACKPYSNCTGAR*PGSSGGAWRPG
Trigger: TCCTGGACGCCATGCCCCACCACTGGATCCGGGGCAACGTGCCCCTGTGCAGTTACTGTATGGTTTGCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000572944.1
ENST00000576869.5
CDS CAA 90 bp ACCTTGGTGTCATTCTTGAGCATAATCTCCTTGCACTGGAAGCGCTaGTCGGCCTTCCTGAGGCAGCCCTCGTCCACGCGGAGCCCGCAG +
Preference number: 6 (lower is better)
Translates to: TLVSFLSIISLHWKR*SAFLRQPSSTRSPQ
Trigger: CTGCGGGCTCCGCGTGGACGAGGGCTGCCTCAGGAAGGCCGACAAGCGCTTCCAGTGCAAGGAGATTATGCTCAAGAATGACACCAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000572944.1
ENST00000576869.5
CDS GCA 72 bp GACAGCCACACTGCTGCTTGCAAACCATACAGTAACTaGACAGGGGCACGTTGCCCCGGATCCAGTGGTGGG +
Preference number: 6 (lower is better)
Translates to: DSHTAACKPYSN*TGARCPGSSGG
Trigger: CCCACCACTGGATCCGGGGCAACGTGCCCCTGTGCAGTTACTGTATGGTTTGCAAGCAGCAGTGTGGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000572944.1
ENST00000576869.5
CDS GCA 72 bp GTGCAGGGCCCTTGGGCCCAAGGCTCCCCATCCACCTaGATTGGCATCATGGAGCACTTCAAAATCAGCCTC +
Preference number: 6 (lower is better)
Translates to: VQGPWAQGSPST*IGIMEHFKISL
Trigger: GAGGCTGATTTTGAAGTGCTCCATGATGCCAATGCAGGTGGATGGGGAGCCTTGGGCCCAAGGGCCCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284061.8
CDS CAA 90 bp GGCATGGCGTCCAGGACCTTGGTGTCATTCTTGAGCATAATCTCCTaGCACTGGAAGCGCTTGTCGGCCTTCCTGAGGCAGCCCTCGTCC +
Preference number: 6 (lower is better)
Translates to: GMASRTLVSFLSIIS*HWKRLSAFLRQPSS
Trigger: GGACGAGGGCTGCCTCAGGAAGGCCGACAAGCGCTTCCAGTGCAAGGAGATTATGCTCAAGAATGACACCAAGGTCCTGGACGCCATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000572944.1
ENST00000576869.5
CDS CAA 90 bp CGGATCCAGTGGTGGGGCATGGCGTCCAGGACCTTGGTGTCATTCTaGAGCATAATCTCCTTGCACTGGAAGCGCTTGTCGGCCTTCCTG +
Preference number: 6 (lower is better)
Translates to: RIQWWGMASRTLVSF*SIISLHWKRLSAFL
Trigger: CAGGAAGGCCGACAAGCGCTTCCAGTGCAAGGAGATTATGCTCAAGAATGACACCAAGGTCCTGGACGCCATGCCCCACCACTGGATCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000572944.1
ENST00000576869.5
CDS CAA 72 bp TCATTCTTGAGCATAATCTCCTTGCACTGGAAGCGCTaGTCGGCCTTCCTGAGGCAGCCCTCGTCCACGCGG +
Preference number: 6 (lower is better)
Translates to: SFLSIISLHWKR*SAFLRQPSSTR
Trigger: CCGCGTGGACGAGGGCTGCCTCAGGAAGGCCGACAAGCGCTTCCAGTGCAAGGAGATTATGCTCAAGAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000572944.1
ENST00000576869.5
CDS GCA 72 bp GAGGGTAAGTCTCGTCCCCCATCCCTTCCCATAGTCTaGAGCCACCGCCCCAGTATCCGATGTTCAGAACTA +
Preference number: 6 (lower is better)
Translates to: EGKSRPPSLPIV*SHRPSIRCSEL
Trigger: TAGTTCTGAACATCGGATACTGGGGCGGTGGCTGCAGACTATGGGAAGGGATGGGGGACGAGACTTACCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS CAA 72 bp TGGTGGGGCATGGCGTCCAGGACCTTGGTGTCATTCTaGAGCATAATCTCCTTGCACTGGAAGCGCTTGTCG +
Preference number: 6 (lower is better)
Translates to: WWGMASRTLVSF*SIISLHWKRLS
Trigger: CGACAAGCGCTTCCAGTGCAAGGAGATTATGCTCAAGAATGACACCAAGGTCCTGGACGCCATGCCCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000572944.1
ENST00000576869.5
CDS CAA 72 bp TCCAGGACCTTGGTGTCATTCTTGAGCATAATCTCCTaGCACTGGAAGCGCTTGTCGGCCTTCCTGAGGCAG +
Preference number: 6 (lower is better)
Translates to: SRTLVSFLSIIS*HWKRLSAFLRQ
Trigger: CTGCCTCAGGAAGGCCGACAAGCGCTTCCAGTGCAAGGAGATTATGCTCAAGAATGACACCAAGGTCCTGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000572944.1
ENST00000576869.5
CDS GCA 72 bp AATCGCAAAGCTTGGGTTGACAGCCACACTGCTGCTTaGAAACCATACAGTAACTGCACAGGGGCACGTTGC +
Preference number: 6 (lower is better)
Translates to: NRKAWVDSHTAA*KPYSNCTGARC
Trigger: GCAACGTGCCCCTGTGCAGTTACTGTATGGTTTGCAAGCAGCAGTGTGGCTGTCAACCCAAGCTTTGCGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284061.8
ENST00000572810.1
ENST00000572944.1
ENST00000576869.5
CDS TCA 72 bp TCAGCAGAGATTAAAGCAGGCCTCTACACCACTCTATaGAATCCTGATTCCCACGGCGCATTCTGGGACAGT +
Preference number: 6 (lower is better)
Translates to: SAEIKAGLYTTL*NPDSHGAFWDS
Trigger: ACTGTCCCAGAATGCGCCGTGGGAATCAGGATTTCATAGAGTGGTGTAGAGGCCTGCTTTAATCTCTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS CCA 72 bp AGTGTCCACGAAGACCATACCTGTAATCGCAAAGCTTaGGTTGACAGCCACACTGCTGCTTGCAAACCATAC +
Preference number: 6 (lower is better)
Translates to: SVHEDHTCNRKA*VDSHTAACKPY
Trigger: GTATGGTTTGCAAGCAGCAGTGTGGCTGTCAACCCAAGCTTTGCGATTACAGGTATGGTCTTCGTGGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS CAA 72 bp CTGGCACCAAATGCACCTGTAATCGCAAAGCTTGGGTaGACAGCCACACTGCTGCTTGCAAACCATACAGTA +
Preference number: 6 (lower is better)
Translates to: LAPNAPVIAKLG*TATLLLANHTV
Trigger: TACTGTATGGTTTGCAAGCAGCAGTGTGGCTGTCAACCCAAGCTTTGCGATTACAGGTGCATTTGGTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284061.8
ENST00000572944.1
ENST00000576869.5
CDS CAA 72 bp TCCACGAAGACCATACCTGTAATCGCAAAGCTTGGGTaGACAGCCACACTGCTGCTTGCAAACCATACAGTA +
Preference number: 6 (lower is better)
Translates to: STKTIPVIAKLG*TATLLLANHTV
Trigger: TACTGTATGGTTTGCAAGCAGCAGTGTGGCTGTCAACCCAAGCTTTGCGATTACAGGTATGGTCTTCGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572810.1
CDS GCA 72 bp AACCTGTACCCCAACCCAATGTATTGGATAGATCGTTaGCTGTTCCCAGAGGCAAAACTGCAACTTGTGGAA +
Preference number: 6 (lower is better)
Translates to: NLYPNPMYWIDR*LFPEAKLQLVE
Trigger: TTCCACAAGTTGCAGTTTTGCCTCTGGGAACAGGCAACGATCTATCCAATACATTGGGTTGGGGTACAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS CCA 72 bp TTTCTCCAGCATAACCTGTACCCCAACCCAATGTATTaGATAGATCGTTGCCTGTTCCCAGAGGCAAAACTG +
Preference number: 6 (lower is better)
Translates to: FLQHNLYPNPMY*IDRCLFPEAKL
Trigger: CAGTTTTGCCTCTGGGAACAGGCAACGATCTATCCAATACATTGGGTTGGGGTACAGGTTATGCTGGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS CAA 90 bp AATTCTCCCAACAGTCCTTCTCCCATATTAGTTCCACTACGAGAGTaGGCCAGGATTATTAATGGGGTCCACTGCTTTCCAAGCTTAGAG +
Preference number: 6 (lower is better)
Translates to: NSPNSPSPILVPLRE*ARIINGVHCFPSLE
Trigger: CTCTAAGCTTGGAAAGCAGTGGACCCCATTAATAATCCTGGCCAACTCTCGTAGTGGAACTAATATGGGAGAAGGACTGTTGGGAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284061.8
ENST00000571084.1
ENST00000572944.1
ENST00000576869.5
CDS CCA 72 bp ATCTGCTTCCATTACATTTCGCAAAACCTGCGCAACTaGAATTTCTCCAGCATAACCTGTACCCCAACCCAA +
Preference number: 6 (lower is better)
Translates to: ICFHYISQNLRN*NFSSITCTPTQ
Trigger: TTGGGTTGGGGTACAGGTTATGCTGGAGAAATTCCAGTTGCGCAGGTTTTGCGAAATGTAATGGAAGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS CAA 72 bp AACAGTCCTTCTCCCATATTAGTTCCACTACGAGAGTaGGCCAGGATTATTAATGGGGTCCACTGCTTTCCA +
Preference number: 6 (lower is better)
Translates to: NSPSPILVPLRE*ARIINGVHCFP
Trigger: TGGAAAGCAGTGGACCCCATTAATAATCCTGGCCAACTCTCGTAGTGGAACTAATATGGGAGAAGGACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284061.8
ENST00000571084.1
ENST00000572944.1
ENST00000576869.5
CDS CCA 72 bp ATCGTTGCCTGTTCCCAGAGGCAAAACTGCAACTTGTaGAATGTACTTTTCTTGTCCCTTAATCTTCATGTC +
Preference number: 6 (lower is better)
Translates to: IVACSQRQNCNL*NVLFLSLNLHV
Trigger: GACATGAAGATTAAGGGACAAGAAAAGTACATTCCACAAGTTGCAGTTTTGCCTCTGGGAACAGGCAACGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS GCA 72 bp CGCCTTATTAAGAATTCTGCTAGAAAACAGAGATGGTaGCTTCTCACGATGAGCATGAAAATTGAGAGCCAT +
Preference number: 6 (lower is better)
Translates to: RLIKNSARKQRW*LLTMSMKIESH
Trigger: ATGGCTCTCAATTTTCATGCTCATCGTGAGAAGGCACCATCTCTGTTTTCTAGCAGAATTCTTAATAAGGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS GCA 72 bp CTGTTACAGCTATATTTCACCTACCCTCACTGTATGTaGCTGTCCTATTCGAAAAGGATTAGCCAGTTTTAC +
Preference number: 6 (lower is better)
Translates to: LLQLYFTYPHCM*LSYSKRISQFY
Trigger: GTAAAACTGGCTAATCCTTTTCGAATAGGACAGGCACATACAGTGAGGGTAGGTGAAATATAGCTGTAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572944.1
CDS CCA 72 bp AACCGCCTTATTAAGAATTCTGCTAGAAAACAGAGATaGTGCCTTCTCACGATGAGCATGAAAATTGAGAGC +
Preference number: 6 (lower is better)
Translates to: NRLIKNSARKQR*CLLTMSMKIES
Trigger: GCTCTCAATTTTCATGCTCATCGTGAGAAGGCACCATCTCTGTTTTCTAGCAGAATTCTTAATAAGGCGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284061.8
ENST00000572944.1
CDS CAA 90 bp CTTTTTGTCATTTCATGGTATTCCATTGTAGGGCTACATCACATTTaGTTTATCAACTCATCAGCTGATGAACAGCTGGGCTGTTTATGC +
Preference number: 6 (lower is better)
Translates to: LFVISWYSIVGLHHI*FINSSADEQLGCLC
Trigger: GCATAAACAGCCCAGCTGTTCATCAGCTGATGAGTTGATAAACAAAATGTGATGTAGCCCTACAATGGAATACCATGAAATGACAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571084.1
CDS CAA 72 bp ATGCAAATGTTTGTGAGAAATATGTTTTCACTTCCCTaGGGTAGATTCCTAGTAGAGGACTTGCTAGAAGAT +
Preference number: 6 (lower is better)
Translates to: MQMFVRNMFSLP*GRFLVEDLLED
Trigger: ATCTTCTAGCAAGTCCTCTACTAGGAATCTACCCAAGGGAAGTGAAAACATATTTCTCACAAACATTTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571084.1
CDS CAA 72 bp CTTTTTAAGAAACTGCCAAGATGTCTTCTAAAGAGGTaGTACCATTTTATATTCCCACAAGAGTGCCTGTTT +
Preference number: 6 (lower is better)
Translates to: LFKKLPRCLLKR*YHFIFPQECLF
Trigger: AAACAGGCACTCTTGTGGGAATATAAAATGGTACAACCTCTTTAGAAGACATCTTGGCAGTTTCTTAAAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571084.1
CDS GCA 72 bp CTAAAGAGGTTGTACCATTTTATATTCCCACAAGAGTaGCTGTTTATCCACATATTTAAATGGCTGATCTTT +
Preference number: 6 (lower is better)
Translates to: LKRLYHFIFPQE*LFIHIFKWLIF
Trigger: AAAGATCAGCCATTTAAATATGTGGATAAACAGGCACTCTTGTGGGAATATAAAATGGTACAACCTCTTTAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571084.1