RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DGKB (Homo sapiens)

Ensembl gene IDs: ENSG00000136267

Ensembl transcript IDs: ENST00000399322.7, ENST00000402815.6, ENST00000403951.6, ENST00000403963.5, ENST00000406247.7, ENST00000407950.5, ENST00000437998.1, ENST00000463981.2, ENST00000464065.1, ENST00000467449.1, ENST00000471732.5, ENST00000477401.5, ENST00000493142.1

Found 638 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTCATAAAGATGGGAGTGGAGTAGGTGAGGAGGAGGGAGCTAATTaGATGCATGATTCGCTTCCAAGAGCTCAGTATTATTACAGGTAC +
Preference number: 1 (lower is better)
Translates to: CHKDGSGVGEEEGAN*MHDSLPRAQYYYRY
Trigger: GTACCTGTAATAATACTGAGCTCTTGGAAGCGAATCATGCATGCAATTAGCTCCCTCCTCCTCACCTACTCCACTCCCATCTTTATGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR GCA 90 bp TCAAGGTTTACTCTGAAATGTCTCTCTGGAATCTCATCAACTCAGTaGCTAGCAATGTTTAGCAGAGTGCATGTCTCTTTTCCCTCTTTG +
Preference number: 1 (lower is better)
Translates to: SRFTLKCLSGISSTQ*LAMFSRVHVSFPSL
Trigger: CAAAGAGGGAAAAGAGACATGCACTCTGCTAAACATTGCTAGGCACTGAGTTGATGAGATTCCAGAGAGACATTTCAGAGTAAACCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR CCA 90 bp TTTCTGGTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTaGATATCAAGGTTTACTCTGAAATGTCTCTCTGGAATCTCATCA +
Preference number: 1 (lower is better)
Translates to: FLVLCRYLPSYLLEA*ISRFTLKCLSGISS
Trigger: TGATGAGATTCCAGAGAGACATTTCAGAGTAAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAACCAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR GCA 90 bp GTTATGAATTCTCTCCTAGATTCTCATGCAGAAAGGAACAAGGCTTaGCATATTACCACACTTGACTGTCAAGTAACATGTTTTCACTTA +
Preference number: 1 (lower is better)
Translates to: VMNSLLDSHAERNKA*HITTLDCQVTCFHL
Trigger: TAAGTGAAAACATGTTACTTGACAGTCAAGTGTGGTAATATGGCAAGCCTTGTTCCTTTCTGCATGAGAATCTAGGAGAGAATTCATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
3UTR TCA 90 bp TTAAACAGTCAGAGACTCCAACTATGCCATGAACACCTTCAACAGTaGTCTAGGCTGTTGTTTCCAAATAAACATTTGAAATGTCATAAA +
Preference number: 1 (lower is better)
Translates to: LNSQRLQLCHEHLQQ*SRLLFPNKHLKCHK
Trigger: TTTATGACATTTCAAATGTTTATTTGGAAACAACAGCCTAGATCACTGTTGAAGGTGTTCATGGCATAGTTGGAGTCTCTGACTGTTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR-3UTR GCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTGAGGAGGGAGCTAATTaGATGCATGATTCGCTTCCA +
Preference number: 2 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFEEGAN*MHDSLP
Trigger: TGGAAGCGAATCATGCATGCAATTAGCTCCCTCCTC...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR-3UTR CCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTTTAGTAAAAGGAAATTaGGGAAGAGTTGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFLVKGN*GRVGWE
Trigger: CTCCCACCCAACTCTTCCCCAATTTCCTTTTACTAA...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR-3UTR TCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTCAAGTCATAGGTCACTaGTACACTGATTCTAAAAGG +
Preference number: 2 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFQVIGH*YTDSKR
Trigger: CCTTTTAGAATCAGTGTATCAGTGACCTATGACTTG...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR-3UTR CCA 90 bp GGGGCAGTGTCTGCCTTAAATAATACCTCATTCTGGAAAACACAATTAATTATGCCTCAAATCCCCAAATaGAGGCATAGAAAAGCTGAG +
Preference number: 2 (lower is better)
Translates to: GAVSALNNTSFWKTQLIMPQIPK*RHRKAE
Trigger: CTCAGCTTTTCTATGCCTCCATTTGGGGATTTGAGG...CATAATTAATTGTGTTTTCCAGAATGAGGTATTATTTAAGGCAGACACTGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000406247.7
3UTR CAA 90 bp CAGTGCCTAGCAATGTTTAGCAGAGTGCATGTCTCTTTTCCCTCTTaGTTTCTGACTGCTGTTAAGTCCAGCATTAATTTACATTTAAGA +
Preference number: 2 (lower is better)
Translates to: QCLAMFSRVHVSFPS*FLTAVKSSINLHLR
Trigger: TCTTAAATGTAAATTAATGCTGGACTTAACAGCAGTCAGAAACAAAGAGGGAAAAGAGACATGCACTCTGCTAAACATTGCTAGGCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR-3UTR TCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTCATGAGCAGGAGACTTaGAATGGTTCAAAGATTTCC +
Preference number: 2 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIHEQET*NGSKIS
Trigger: GGAAATCTTTGAACCATTTCAAGTCTCCTGCTCATG...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
3UTR-3UTR TCA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGAGTTAAACCACTTCCATaGTTTTGCATGAGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRVKPLP*FCMSRR
Trigger: TCTCCTGCTCATGCAAAATCATGGAAGTGGTTTAAC...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
3UTR-3UTR TCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTGCAGGTCAATATGAATaGACAATATTACAAGACTGC +
Preference number: 2 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFAGQYE*TILQDC
Trigger: GCAGTCTTGTAATATTGTTCATTCATATTGACCTGC...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR-3UTR GCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATAAGGGAGCTAATTGCATaGATGATTCGCTTCCAAGAG +
Preference number: 2 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIRELIA*MIRFQE
Trigger: CTCTTGGAAGCGAATCATGCATGCAATTAGCTCCCT...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR-3UTR TCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCCATGAGCAGGAGACTTaGAATGGTTCAAAGATTTCC +
Preference number: 2 (lower is better)
Translates to: TLILKGKRIAICNYDHCSHEQET*NGSKIS
Trigger: GGAAATCTTTGAACCATTTCAAGTCTCCTGCTCATG...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
3UTR-3UTR TCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCGTTAAACCACTTCCATaGTTTTGCATGAGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: TLILKGKRIAICNYDHCSVKPLP*FCMSRR
Trigger: TCTCCTGCTCATGCAAAATCATGGAAGTGGTTTAAC...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
3UTR-3UTR TCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATAGTTAAACCACTTCCATaGTTTTGCATGAGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIVKPLP*FCMSRR
Trigger: TCTCCTGCTCATGCAAAATCATGGAAGTGGTTTAAC...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR-3UTR GCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTATCTATGGGAATGCATaGACCAAAAATATGCAGTAT +
Preference number: 2 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFIYGNA*TKNMQY
Trigger: ATACTGCATATTTTTGGTGCATGCATTCCCATAGAT...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR-3UTR GCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATAGAAAGGAACAAGGCTTaGCATATTACCACACTTGAC +
Preference number: 2 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIERNKA*HITTLD
Trigger: GTCAAGTGTGGTAATATGGCAAGCCTTGTTCCTTTC...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR-3UTR CCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATATTAGTAAAAGGAAATTaGGGAAGAGTTGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDILVKGN*GRVGWE
Trigger: CTCCCACCCAACTCTTCCCCAATTTCCTTTTACTAA...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR CAA 90 bp TTTGTCTCATCCCACTGTCTATCCAACAGCTTTCTACTGTACAGATaGTTAAGAATGATTCACAAACTGTTGCTGCCTTCAAACTATATA +
Preference number: 2 (lower is better)
Translates to: FVSSHCLSNSFLLYR*LRMIHKLLLPSNYI
Trigger: TATATAGTTTGAAGGCAGCAACAGTTTGTGAATCATTCTTAACAATCTGTACAGTAGAAAGCTGTTGGATAGACAGTGGGATGAGACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR-3UTR GCA 90 bp GGGGCAGTGTCTGCCTTAAATAATACCTCATTCTGGAAAACACAATTAATTATGCAAGAGCTAAATCATTaGCAAGGGTATATAATGTCT +
Preference number: 2 (lower is better)
Translates to: GAVSALNNTSFWKTQLIMQELNH*QGYIMS
Trigger: AGACATTATATACCCTTGGCAATGATTTAGCTCTTG...CATAATTAATTGTGTTTTCCAGAATGAGGTATTATTTAAGGCAGACACTGCCCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
3UTR-3UTR GCA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGACATGCACCAAAAATATaGAGTATCACTTCAGGTAAA +
Preference number: 2 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRHAPKI*SITSGK
Trigger: TTTACCTGAAGTGATACTGCATATTTTTGGTGCATG...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
3UTR-3UTR GCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTCATGCACCAAAAATATaGAGTATCACTTCAGGTAAA +
Preference number: 2 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIHAPKI*SITSGK
Trigger: TTTACCTGAAGTGATACTGCATATTTTTGGTGCATG...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
3UTR-3UTR GCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATAACCAGCGCAAGTGATTaGTGTACTAAATTTGCAATT +
Preference number: 2 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDITSASD*CTKFAI
Trigger: AATTGCAAATTTAGTACAGCAATCACTTGCGCTGGT...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR-3UTR CCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATAAGCATATGTGTTCCATaGCCCAATTATGCTAATTCA +
Preference number: 2 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDISICVP*PNYANS
Trigger: TGAATTAGCATAATTGGGCCATGGAACACATATGCT...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR-3UTR GCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATAGAAACTAATAAATCATaGAGTTCAGGCACTCGTTTT +
Preference number: 2 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIETNKS*SSGTRF
Trigger: AAAACGAGTGCCTGAACTGCATGATTTATTAGTTTC...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR-3UTR CCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGGAATCACGTTTCCCATaGTATTTCCTTTTTCATGTT +
Preference number: 2 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKESRFP*YFLFHV
Trigger: AACATGAAAAAGGAAATACCATGGGAAACGTGATTC...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
3UTR GCA 72 bp GATGGGAGTGGAGTAGGTGAGGAGGAGGGAGCTAATTaGATGCATGATTCGCTTCCAAGAGCTCAGTATTAT +
Preference number: 3 (lower is better)
Translates to: DGSGVGEEEGAN*MHDSLPRAQYY
Trigger: ATAATACTGAGCTCTTGGAAGCGAATCATGCATGCAATTAGCTCCCTCCTCCTCACCTACTCCACTCCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR GCA 72 bp ACTCTGAAATGTCTCTCTGGAATCTCATCAACTCAGTaGCTAGCAATGTTTAGCAGAGTGCATGTCTCTTTT +
Preference number: 3 (lower is better)
Translates to: TLKCLSGISSTQ*LAMFSRVHVSF
Trigger: AAAAGAGACATGCACTCTGCTAAACATTGCTAGGCACTGAGTTGATGAGATTCCAGAGAGACATTTCAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR GCA 72 bp TATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATaGAGAAAGGAACAAGGCTTGCCATATTACCACACT +
Preference number: 3 (lower is better)
Translates to: YWCGYEFSPRFS*RKEQGLPYYHT
Trigger: AGTGTGGTAATATGGCAAGCCTTGTTCCTTTCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
3UTR TCA 72 bp CAGAGACTCCAACTATGCCATGAACACCTTCAACAGTaGTCTAGGCTGTTGTTTCCAAATAAACATTTGAAA +
Preference number: 3 (lower is better)
Translates to: QRLQLCHEHLQQ*SRLLFPNKHLK
Trigger: TTTCAAATGTTTATTTGGAAACAACAGCCTAGATCACTGTTGAAGGTGTTCATGGCATAGTTGGAGTCTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR GCA 72 bp CACTTTAATGCAGAGTGGAGAGAAACTAATAAATCATaGAGTTCAGGCACTCGTTTTCCTTATGGCATGTTT +
Preference number: 3 (lower is better)
Translates to: HFNAEWRETNKS*SSGTRFPYGMF
Trigger: AAACATGCCATAAGGAAAACGAGTGCCTGAACTGCATGATTTATTAGTTTCTCTCCACTCTGCATTAAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR-3UTR CAA 90 bp TTTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGAAGGAAATTACACTGTaGGTCTTGTTCATGTGTCTA +
Preference number: 3 (lower is better)
Translates to: FYTKLLAMSFQRGLPYLKKEITL*VLFMCL
Trigger: TAGACACATGAACAAGACCAACAGTGTAATTTCCTT...CTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
3UTR-3UTR CAA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATAAATCCATGCACAGGATaGTGTTCAACAGAATCACTA +
Preference number: 3 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDINPCTG*CSTESL
Trigger: TAGTGATTCTGTTGAACACAATCCTGTGCATGGATT...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR TCA 72 bp TATGTCTCCTATATTAAAAGAGGGCGACTCAATAGCTaGAAATTTATCTGCACACATAGAAGAGAAGTTTCC +
Preference number: 3 (lower is better)
Translates to: YVSYIKRGRLNS*KFICTHRREVS
Trigger: GGAAACTTCTCTTCTATGTGTGCAGATAAATTTTCAGCTATTGAGTCGCCCTCTTTTAATATAGGAGACATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR TCA 72 bp TTCGAATTAAAAGTTTCTCCTCAAGTCATAGGTCACTaGTACACTGATTCTAAAAGGGAAACGTATAGCAAT +
Preference number: 3 (lower is better)
Translates to: FELKVSPQVIGH*YTDSKRETYSN
Trigger: ATTGCTATACGTTTCCCTTTTAGAATCAGTGTATCAGTGACCTATGACTTGAGGAGAAACTTTTAATTCGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGACCACGCAGGAGCACTaGGCCAGCCGCCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRTTQEH*ASRRPA
Trigger: TGCTGGCCGGCGGCTGGCTCAGTGCTCCTGCGTGGT...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTACCACGCAGGAGCACTaGGCCAGCCGCCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LSFWLCPFKEVSLISSSITTQEH*ASRRPA
Trigger: TGCTGGCCGGCGGCTGGCTCAGTGCTCCTGCGTGGT...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR TCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGACCACGCAGGAGCACTaGGCCAGCCGCCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMTTQEH*ASRRPA
Trigger: TGCTGGCCGGCGGCTGGCTCAGTGCTCCTGCGTGGT...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGAACCACGCAGGAGCACTaGGCCAGCCGCCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRTTQEH*ASRRPA
Trigger: TGCTGGCCGGCGGCTGGCTCAGTGCTCCTGCGTGGT...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCGAACAGCAGAGGCCCTaGTTCCCCACGCCAATCAGC +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACEQQRP*FPTPIS
Trigger: GCTGATTGGCGTGGGGAAGCAGGGCCTCTGCTGTTC...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCTACCAGGCACAGGAGTaGCCTGCAGGCCTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACYQAQE*PAGLVH
Trigger: ATGGACAAGGCCTGCAGGTCACTCCTGTGCCTGGTA...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTGAACAGCAGAGGCCCTaGTTCCCCACGCCAATCAGC +
Preference number: 4 (lower is better)
Translates to: LSFWLCPFKEVSLISSSIEQQRP*FPTPIS
Trigger: GCTGATTGGCGTGGGGAAGCAGGGCCTCTGCTGTTC...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR GCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGGATGCAAGAGGGAGGTaGTCGAGCCACACAGCGCTC +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRDARGR*SSHTAL
Trigger: GAGCGCTGTGTGGCTCGAGCACCTCCCTCTTGCATC...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCATTGTGCATGGGGTCTaGATCCATGGCTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACIVHGV*IHGSPS
Trigger: TGATGGGGAGCCATGGATGCAGACCCCATGCACAAT...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGAGGCGATTTGCGCGGCTaGAAGCACCAGCCCTGCCTA +
Preference number: 4 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRGDLRG*KHQPCL
Trigger: TAGGCAGGGCTGGTGCTTGCAGCCGCGCAAATCGCC...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403951.6
CDS-3UTR CCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCGCCACACAGCGCTCATaGACTGTGTACTTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACATQRS*TVYLQK
Trigger: CTTCTGCAAGTACACAGTCCATGAGCGCTGTGTGGC...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCGGAATCTGTGTGCAATaGAGGCATCCACGCCAATGG +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACGICVQ*RHPRQW
Trigger: CCATTGGCGTGGATGCCTCCATTGCACACAGATTCC...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTTACCAGGCACAGGAGTaGCCTGCAGGCCTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LSFWLCPFKEVSLISSSIYQAQE*PAGLVH
Trigger: ATGGACAAGGCCTGCAGGTCACTCCTGTGCCTGGTA...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR TCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCCTTCTTGCAGGTGGCTaGGAAAGTTTCAGATGTGCC +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACLLAGG*ESFRCA
Trigger: GGCACATCTGAAACTTTCTCAGCCACCTGCAAGAAG...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGAGAACAGCAGAGGCCCTaGTTCCCCACGCCAATCAGC +
Preference number: 4 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCREQQRP*FPTPIS
Trigger: GCTGATTGGCGTGGGGAAGCAGGGCCTCTGCTGTTC...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTGATGCAAGAGGGAGGTaGTCGAGCCACACAGCGCTC +
Preference number: 4 (lower is better)
Translates to: FILSFWLCPFKEVSLISSDARGR*SSHTAL
Trigger: GAGCGCTGTGTGGCTCGAGCACCTCCCTCTTGCATC...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR GCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCGGCTCCCCATCAATTTaGATTGGCAGAGACTTGCTC +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACGSPSI*IGRDLL
Trigger: GAGCAAGTCTCTGCCAATGCAAATTGATGGGGAGCC...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCGAGGAGGAGGCGATTTaGGCGGCTGCAAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSEEEAI*AAASTS
Trigger: GCTGGTGCTTGCAGCCGCGCAAATCGCCTCCTCCTC...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403951.6
CDS-3UTR CCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCCTGAAACTCCTGAAGTaGGCAGAGTCAGTACCACTG +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACLKLLK*AESVPL
Trigger: CAGTGGTACTGACTCTGCCCACTTCAGGAGTTTCAG...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402815.6
ENST00000407950.5
CDS-3UTR TCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCGTTGTCATTCCTCCTTaGATCCATTCCTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACVVIPP*IHSSRD
Trigger: GTCTCTGGAGGAATGGATTCAAGGAGGAATGACAAC...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTTACCAGGCACAGGAGTaGCCTGCAGGCCTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIYQAQE*PAGLVH
Trigger: ATGGACAAGGCCTGCAGGTCACTCCTGTGCCTGGTA...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGTACCAGGCACAGGAGTaGCCTGCAGGCCTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVYQAQE*PAGLVH
Trigger: ATGGACAAGGCCTGCAGGTCACTCCTGTGCCTGGTA...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGCTGGTCTTGAACTCCTaGCCTTGTGATCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRLVLNS*PCDLPA
Trigger: GGCAGGCAGATCACAAGGTCAGGAGTTCAAGACCAG...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTGGTCTTGAACTCCTaGCCTTGTGATCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMLVLNS*PCDLPA
Trigger: GGCAGGCAGATCACAAGGTCAGGAGTTCAAGACCAG...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTGAACAGCAGAGGCCCTaGTTCCCCACGCCAATCAGC +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISEQQRP*FPTPIS
Trigger: GCTGATTGGCGTGGGGAAGCAGGGCCTCTGCTGTTC...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGGATGCAAGAGGGAGGTaGTCGAGCCACACAGCGCTC +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKDARGR*SSHTAL
Trigger: GAGCGCTGTGTGGCTCGAGCACCTCCCTCTTGCATC...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTGATGCAAGAGGGAGGTaGTCGAGCCACACAGCGCTC +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISDARGR*SSHTAL
Trigger: GAGCGCTGTGTGGCTCGAGCACCTCCCTCTTGCATC...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTATTGTGCATGGGGTCTaGATCCATGGCTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFIVHGV*IHGSPS
Trigger: TGATGGGGAGCCATGGATGCAGACCCCATGCACAAT...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCGAGGAGGGAGCTAATTaGATGCATGATTCGCTTCCA +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACEEGAN*MHDSLP
Trigger: TGGAAGCGAATCATGCATGCAATTAGCTCCCTCCTC...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTCCTGACCTTGTGATCTaGCTGCCTCTGTCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFPDLVI*LPLSPK
Trigger: TTTGGGAGACAGAGGCAGGCAGATCACAAGGTCAGG...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGCTGCCTATCTCTGGCTaGCGCTTCTCCAGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRLPISG*RFSSCY
Trigger: ATAGCAGCTGGAGAAGCGGCAGCCAGAGATAGGCAG...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403951.6
CDS-3UTR GCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCTGCAAGCACCAGCCCTaGCTATCTCTGGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSCKHQP*LSLAAA
Trigger: AGCGGCAGCCAGAGATAGGCAGGGCTGGTGCTTGCA...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403951.6
CDS-3UTR CCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTTCCGAAGGGCTGAGGTaGGCCCATTTTTCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFSEGLR*AHFSWF
Trigger: AAACCAGGAAAAATGGGCCCACCTCAGCCCTTCGGA...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCCAGGAGCACAAGAAGTaGAATCGTTGTCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACQEHKK*NRCHSS
Trigger: GGAGGAATGACAACGATTCCACTTCTTGTGCTCCTG...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTGCCACACAGCGCTCATaGACTGTGTACTTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFATQRS*TVYLQK
Trigger: CTTCTGCAAGTACACAGTCCATGAGCGCTGTGTGGC...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATATACCAGGCACAGGAGTaGCCTGCAGGCCTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIYQAQE*PAGLVH
Trigger: ATGGACAAGGCCTGCAGGTCACTCCTGTGCCTGGTA...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTCACAGGCTAACACTCTaGAGTCAGGAACATCACGGA +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFHRLTL*SQEHHG
Trigger: TCCGTGATGTTCCTGACTTCAGAGTGTTAGCCTGTG...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTCTTCTTGCAGGTGGCTaGGAAAGTTTCAGATGTGCC +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFLLAGG*ESFRCA
Trigger: GGCACATCTGAAACTTTCTCAGCCACCTGCAAGAAG...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCGGTTTCTTGTCCTTTTaGCGAGGGAGCAGAATAAAC +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACGFLSF*RGSRIN
Trigger: GTTTATTCTGCTCCCTCGTCAAAAGGACAAGAAACC...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCGTTATACAGCTACACTaGAGTGAAGCTGCATCCCAT +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACVIQLH*SEAASH
Trigger: ATGGGATGCAGCTTCACTTCAGTGTAGCTGTATAAC...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCTTCCCTCTTTGTTTCTaGCTGCTGTTAAGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACFPLCF*LLLSPA
Trigger: TGCTGGACTTAACAGCAGTCAGAAACAAAGAGGGAA...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGTTCAGTCGCCACACGTaGTGTCCATCATCCTTCACG +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMFSRHT*CPSSFT
Trigger: CGTGAAGGATGATGGACAGCACGTGTGGCGACTGAA...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGTTCAGTCGCCACACGTaGTGTCCATCATCCTTCACG +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRFSRHT*CPSSFT
Trigger: CGTGAAGGATGATGGACAGCACGTGTGGCGACTGAA...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTGCAGGTTTGTTAAAGTaGTTCAGTCGCCACACGTGC +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFAGLLK*FSRHTC
Trigger: GCACGTGTGGCGACTGAAGCACTTTAACAAACCTGC...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGAGGCACAGGAGTGACCTaGAGGCCTTGTCCATCTACA +
Preference number: 4 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRGTGVT*RPCPST
Trigger: TGTAGATGGACAAGGCCTGCAGGTCACTCCTGTGCC...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTGGCACAGGAGTGACCTaGAGGCCTTGTCCATCTACA +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIGTGVT*RPCPST
Trigger: TGTAGATGGACAAGGCCTGCAGGTCACTCCTGTGCC...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTGGCACAGGAGTGACCTaGAGGCCTTGTCCATCTACA +
Preference number: 4 (lower is better)
Translates to: FILSFWLCPFKEVSLISSGTGVT*RPCPST
Trigger: TGTAGATGGACAAGGCCTGCAGGTCACTCCTGTGCC...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR GCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGGGCACAGGAGTGACCTaGAGGCCTTGTCCATCTACA +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVGTGVT*RPCPST
Trigger: TGTAGATGGACAAGGCCTGCAGGTCACTCCTGTGCC...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCCATTGGCCTTTTCTATaGAATCCAAAACCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACHWPFL*NPKPSP
Trigger: TGGGCTGGGTTTTGGATTGCATAGAAAAGGCCAATG...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGACAGGCGTAAGCCATTaGGCCTGGCCACATTTTCCT +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMTGVSH*AWPHFP
Trigger: AGGAAAATGTGGCCAGGCGCAATGGCTTACGCCTGT...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCCTGACCTTGTGATCTaGCTGCCTCTGTCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMPDLVI*LPLSPK
Trigger: TTTGGGAGACAGAGGCAGGCAGATCACAAGGTCAGG...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTACTGTGCATGGGGTCTaGATCCATGGCTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: FILSFWLCPFKEVSLISSTVHGV*IHGSPS
Trigger: TGATGGGGAGCCATGGATGCAGACCCCATGCACAGT...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTTGGGCCCATTTTTCCTaGTTTGTCATGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFWAHFS*FVMVVV
Trigger: CACCACCACCATGACAAACCAGGAAAAATGGGCCCA...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGTCCGAAGGGCTGAGGTaGGCCCATTTTTCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMSEGLR*AHFSWF
Trigger: AAACCAGGAAAAATGGGCCCACCTCAGCCCTTCGGA...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTTCCGAAGGGCTGAGGTaGGCCCATTTTTCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LSFWLCPFKEVSLISSSISEGLR*AHFSWF
Trigger: AAACCAGGAAAAATGGGCCCACCTCAGCCCTTCGGA...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGGCCACACAGCGCTCATaGACTGTGTACTTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRATQRS*TVYLQK
Trigger: CTTCTGCAAGTACACAGTCCATGAGCGCTGTGTGGC...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCCTTATCACACTTGGTTaGGCAGTTACCTTCAACCCA +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACLITLG*AVTFNP
Trigger: TGGGTTGAAGGTAACTGCCCAACCAAGTGTGATAAG...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCGGCACTTATCACACTTaGTTGGGCAGTTACCTTCAA +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACGTYHT*LGSYLQ
Trigger: TTGAAGGTAACTGCCCAACCAAGTGTGATAAGTGCC...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTAGTCTGCAGTACCACTaGACAGATTGTTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFSLQYH*TDCCGW
Trigger: CCACCCACAACAATCTGTCCAGTGGTACTGCAGACT...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399322.7
ENST00000403951.6
CDS-3UTR CCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTCTGAAACTCCTGAAGTaGGCAGAGTCTGCAGTACCA +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFLKLLK*AESAVP
Trigger: TGGTACTGCAGACTCTGCCCACTTCAGGAGTTTCAG...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399322.7
ENST00000403951.6
CDS-3UTR TCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCTTATGCAGTGTGATCTaGCACCAAACACAATGCAGT +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACLCSVI*HQTQCS
Trigger: ACTGCATTGTGTTTGGTGTCAGATCACACTGCATAA...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCACAGGCTAACACTCTaGAGTCAGGAACATCACGGA +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMHRLTL*SQEHHG
Trigger: TCCGTGATGTTCCTGACTTCAGAGTGTTAGCCTGTG...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCTCCACCTGTCCAACATaGTTTCTGTGCTGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACSTCPT*FLCCFQ
Trigger: TTGAAAACAGCACAGAAATCATGTTGGACAGGTGGA...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGACTCTTTGGCATCTGTaGCGGTGGTCCTTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRTLWHL*RWSFCQ
Trigger: CTGACAAAAGGACCACCGTCACAGATGCCAAAGAGT...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGACTCTTTGGCATCTGTaGCGGTGGTCCTTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMTLWHL*RWSFCQ
Trigger: CTGACAAAAGGACCACCGTCACAGATGCCAAAGAGT...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCGTTAAACCACTTCCATaGTTTTGCATGAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACVKPLP*FCMSRR
Trigger: TCTCCTGCTCATGCAAAATCATGGAAGTGGTTTAAC...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTGTGGAAACACGTATGTaGTTCATTAGCCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFVETRM*FISPHW
Trigger: CCAGTGAGGGCTAATGAATCACATACGTGTTTCCAC...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGCTGGTCTTGAACTCCTaGCCTTGTGATCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKLVLNS*PCDLPA
Trigger: GGCAGGCAGATCACAAGGTCAGGAGTTCAAGACCAG...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCTGTGTGTGTGTGTGTTaGGGAGGAGGCGATTTGCGC +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSCVCVC*GGGDLR
Trigger: GCGCAAATCGCCTCCTCCTCAACACACACACACACA...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403951.6
CDS-3UTR GCA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGAGAGCTTCAAGAACTCTaGTCACAGCATCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRELQEL*SQHPPP
Trigger: GGGAGGAGGATGCTGTGAGCAGAGTTCTTGAAGCTC...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407950.5
CDS-3UTR GCA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTTGGGGAACACGTATTTaGAGGAGAAGTAGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: FILSFWLCPFKEVSLISSWGTRI*RRSSPG
Trigger: CCCCGGACTACTTCTCCTGCAAATACGTGTTCCCCA...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR GCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTTGGGGAACACGTATTTaGAGGAGAAGTAGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIWGTRI*RRSSPG
Trigger: CCCCGGACTACTTCTCCTGCAAATACGTGTTCCCCA...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp GGGGCAGTGTCTGCCTTAAATAATACCTCATTCTGGAAAACACAATTAATTATGTTCAGTCGCCACACGTaGTGTCCATCATCCTTCACG +
Preference number: 4 (lower is better)
Translates to: GAVSALNNTSFWKTQLIMFSRHT*CPSSFT
Trigger: CGTGAAGGATGATGGACAGCACGTGTGGCGACTGAA...CATAATTAATTGTGTTTTCCAGAATGAGGTATTATTTAAGGCAGACACTGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR GCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGGCAGGTTTGTTAAAGTaGTTCAGTCGCCACACGTGC +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRAGLLK*FSRHTC
Trigger: GCACGTGTGGCGACTGAAGCACTTTAACAAACCTGC...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTCATGGACTGTGTACTTaGAGAAGGAACAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LSFWLCPFKEVSLISSSIHGLCT*RRNSRG
Trigger: GCCTCTGCTGTTCCTTCTGCAAGTACACAGTCCATG...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR GCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATAGGCACAGGAGTGACCTaGAGGCCTTGTCCATCTACA +
Preference number: 4 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIGTGVT*RPCPST
Trigger: TGTAGATGGACAAGGCCTGCAGGTCACTCCTGTGCC...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGCTCTGTCTCCCAAAGTaGTGGGATTACAGGCGTAAG +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRLCLPK*WDYRRK
Trigger: CTTACGCCTGTAATCCCAGCACTTTGGGAGACAGAG...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGCCTGACCTTGTGATCTaGCTGCCTCTGTCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVPDLVI*LPLSPK
Trigger: TTTGGGAGACAGAGGCAGGCAGATCACAAGGTCAGG...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTCAGGAGCACAAGAAGTaGAATCGTTGTCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFQEHKK*NRCHSS
Trigger: GGAGGAATGACAACGATTCCACTTCTTGTGCTCCTG...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTGCCACACAGCGCTCATaGACTGTGTACTTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIATQRS*TVYLQK
Trigger: CTTCTGCAAGTACACAGTCCATGAGCGCTGTGTGGC...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGGCCACACAGCGCTCATaGACTGTGTACTTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FYTKLLAMSFQRGLPYLKATQRS*TVYLQK
Trigger: CTTCTGCAAGTACACAGTCCATGAGCGCTGTGTGGC...CTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCCTGGACAGATTGTTGTaGGTGGTAAAATATGGTCCT +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACLDRLL*VVKYGP
Trigger: AGGACCATATTTTACCACCCACAACAATCTGTCCAG...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCAGAGTCAGTACCACTaGACAGATTGTTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMQSQYH*TDCCGW
Trigger: CCACCCACAACAATCTGTCCAGTGGTACTGACTCTG...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402815.6
ENST00000407950.5
CDS-3UTR CCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCACTTTGTTTGGCTGCTaGGAACCACTCTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACTLFGC*EPLFSF
Trigger: AAAGGAAAAGAGTGGTTCCCAGCAGCCAAACAAAGT...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTAGGCAGAATCGCAACTaGAGGATGCTTGCCTACATT +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFRQNRN*RMLAYI
Trigger: AATGTAGGCAAGCATCCTCCAGTTGCGATTCTGCCT...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTGGAATCTGTGTGCAATaGAGGCATCCACGCCAATGG +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIGICVQ*RHPRQW
Trigger: CCATTGGCGTGGATGCCTCCATTGCACACAGATTCC...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGGGAATCTGTGTGCAATaGAGGCATCCACGCCAATGG +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVGICVQ*RHPRQW
Trigger: CCATTGGCGTGGATGCCTCCATTGCACACAGATTCC...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp GGGGCAGTGTCTGCCTTAAATAATACCTCATTCTGGAAAACACAATTAATTATGGGAATCTGTGTGCAATaGAGGCATCCACGCCAATGG +
Preference number: 4 (lower is better)
Translates to: GAVSALNNTSFWKTQLIMGICVQ*RHPRQW
Trigger: CCATTGGCGTGGATGCCTCCATTGCACACAGATTCC...CATAATTAATTGTGTTTTCCAGAATGAGGTATTATTTAAGGCAGACACTGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCAATTTTTATTGTGCATaGGGTCTGCATCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACNFYCA*GLHPWL
Trigger: GAGCCATGGATGCAGACCCCATGCACAATAAAAATT...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTAGTCTGCAGTACCACTaGACAGATTGTTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LSFWLCPFKEVSLISSSISLQYH*TDCCGW
Trigger: CCACCCACAACAATCTGTCCAGTGGTACTGCAGACT...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR TCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGTTAAAGAATGCAGTGTaGTGCAGGCGAAAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRLKNAV*CRRKLS
Trigger: GCTCAGCTTTCGCCTGCATCACACTGCATTCTTTAA...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402815.6
ENST00000407950.5
CDS-3UTR TCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTAAAATTCCGAAGGGCTaGGGTGGGCCCATTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIKIPKG*GGPIFP
Trigger: AGGAAAAATGGGCCCACCTCAGCCCTTCGGAATTTT...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTGTTGTCATTCCTCCTTaGATCCATTCCTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LSFWLCPFKEVSLISSSIVVIPP*IHSSRD
Trigger: GTCTCTGGAGGAATGGATTCAAGGAGGAATGACAAC...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR TCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGACTTCACATAGGTCTTaGTGCAAGAGGGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVTSHRS*CKREVL
Trigger: GAGCACCTCCCTCTTGCATCAAGACCTATGTGAAGT...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp TTTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGACTTCACATAGGTCTTaGTGCAAGAGGGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: FYTKLLAMSFQRGLPYLKTSHRS*CKREVL
Trigger: GAGCACCTCCCTCTTGCATCAAGACCTATGTGAAGT...CTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR TCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGAAAACTAAAAGTGGGTaGGTACCAGGCACAGGAGTG +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMKTKSG*VPGTGV
Trigger: CACTCCTGTGCCTGGTACTCACCCACTTTTAGTTTT...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTAAAACTAAAAGTGGGTaGGTACCAGGCACAGGAGTG +
Preference number: 4 (lower is better)
Translates to: LSFWLCPFKEVSLISSSIKTKSG*VPGTGV
Trigger: CACTCCTGTGCCTGGTACTCACCCACTTTTAGTTTT...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR TCA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTCACAGGCTAACACTCTaGAGTCAGGAACATCACGGA +
Preference number: 4 (lower is better)
Translates to: FILSFWLCPFKEVSLISSHRLTL*SQEHHG
Trigger: TCCGTGATGTTCCTGACTTCAGAGTGTTAGCCTGTG...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR TCA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTCTTCTTGCAGGTGGCTaGGAAAGTTTCAGATGTGCC +
Preference number: 4 (lower is better)
Translates to: FILSFWLCPFKEVSLISSLLAGG*ESFRCA
Trigger: GGCACATCTGAAACTTTCTCAGCCACCTGCAAGAAG...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR TCA 90 bp GGGGCAGTGTCTGCCTTAAATAATACCTCATTCTGGAAAACACAATTAATTATGACTCTTTGGCATCTGTaGCGGTGGTCCTTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: GAVSALNNTSFWKTQLIMTLWHL*RWSFCQ
Trigger: CTGACAAAAGGACCACCGTCACAGATGCCAAAGAGT...CATAATTAATTGTGTTTTCCAGAATGAGGTATTATTTAAGGCAGACACTGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR TCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGACTCTTTGGCATCTGTaGCGGTGGTCCTTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVTLWHL*RWSFCQ
Trigger: CTGACAAAAGGACCACCGTCACAGATGCCAAAGAGT...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTGGTTTCTTGTCCTTTTaGCGAGGGAGCAGAATAAAC +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFGFLSF*RGSRIN
Trigger: GTTTATTCTGCTCCCTCGTCAAAAGGACAAGAAACC...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGACAGGGGCAGTATACTTaGAGGGGCAAGTACATCAGT +
Preference number: 4 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRQGQYT*RGKYIS
Trigger: ACTGATGTACTTGCCCCTTCAAGTATACTGCCCCTG...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTTATGTCAAGACGCGTTaGTATTGGAAGTCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFYVKTR*YWKSVQ
Trigger: CTGCACAGACTTCCAATATCAACGCGTCTTGACATA...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403951.6
CDS-3UTR GCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTTGGGGAACACGTATTTaGAGGAGAAGTAGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISWGTRI*RRSSPG
Trigger: CCCCGGACTACTTCTCCTGCAAATACGTGTTCCCCA...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCTGGGGAACACGTATTTaGAGGAGAAGTAGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSWGTRI*RRSSPG
Trigger: CCCCGGACTACTTCTCCTGCAAATACGTGTTCCCCA...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATATTCAGTCGCCACACGTaGTGTCCATCATCCTTCACG +
Preference number: 4 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIFSRHT*CPSSFT
Trigger: CGTGAAGGATGATGGACAGCACGTGTGGCGACTGAA...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp TTTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGGCAGGTTTGTTAAAGTaGTTCAGTCGCCACACGTGC +
Preference number: 4 (lower is better)
Translates to: FYTKLLAMSFQRGLPYLKAGLLK*FSRHTC
Trigger: GCACGTGTGGCGACTGAAGCACTTTAACAAACCTGC...CTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR GCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTCATGGACTGTGTACTTaGAGAAGGAACAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIHGLCT*RRNSRG
Trigger: GCCTCTGCTGTTCCTTCTGCAAGTACACAGTCCATG...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGCATGGACTGTGTACTTaGAGAAGGAACAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVHGLCT*RRNSRG
Trigger: GCCTCTGCTGTTCCTTCTGCAAGTACACAGTCCATG...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGATCGCAACTGGAGGATaGTTGCCTACATTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMIATGG*LPTLAF
Trigger: AAAGGCCAATGTAGGCAAGCATCCTCCAGTTGCGAT...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTGGCTCCCCATCAATTTaGATTGGCAGAGACTTGCTC +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIGSPSI*IGRDLL
Trigger: GAGCAAGTCTCTGCCAATGCAAATTGATGGGGAGCC...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGGGCTCCCCATCAATTTaGATTGGCAGAGACTTGCTC +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVGSPSI*IGRDLL
Trigger: GAGCAAGTCTCTGCCAATGCAAATTGATGGGGAGCC...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TTTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGGGCTCCCCATCAATTTaGATTGGCAGAGACTTGCTC +
Preference number: 4 (lower is better)
Translates to: FYTKLLAMSFQRGLPYLKGSPSI*IGRDLL
Trigger: GAGCAAGTCTCTGCCAATGCAAATTGATGGGGAGCC...CTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR GCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGATTGTGCATGGGGTCTaGATCCATGGCTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKIVHGV*IHGSPS
Trigger: TGATGGGGAGCCATGGATGCAGACCCCATGCACAAT...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTATTGTGCATGGGGTCTaGATCCATGGCTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISIVHGV*IHGSPS
Trigger: TGATGGGGAGCCATGGATGCAGACCCCATGCACAAT...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCATCTCATCAACTCAGTaGCTAGCAATGTTTAGCAGA +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACISSTQ*LAMFSR
Trigger: TCTGCTAAACATTGCTAGGCACTGAGTTGATGAGAT...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCACAGGCGTAAGCCATTaGGCCTGGCCACATTTTCCT +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSTGVSH*AWPHFP
Trigger: AGGAAAATGTGGCCAGGCGCAATGGCTTACGCCTGT...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATAACAGGCGTAAGCCATTaGGCCTGGCCACATTTTCCT +
Preference number: 4 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDITGVSH*AWPHFP
Trigger: AGGAAAATGTGGCCAGGCGCAATGGCTTACGCCTGT...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGCTCTGTCTCCCAAAGTaGTGGGATTACAGGCGTAAG +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVLCLPK*WDYRRK
Trigger: CTTACGCCTGTAATCCCAGCACTTTGGGAGACAGAG...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTTGGGCCCATTTTTCCTaGTTTGTCATGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIWAHFS*FVMVVV
Trigger: CACCACCACCATGACAAACCAGGAAAAATGGGCCCA...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGTGGGCCCATTTTTCCTaGTTTGTCATGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVWAHFS*FVMVVV
Trigger: CACCACCACCATGACAAACCAGGAAAAATGGGCCCA...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTGGGCCCATTTTTCCTaGTTTGTCATGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: FYTKLLAMSFQRGLPYLKWAHFS*FVMVVV
Trigger: CACCACCACCATGACAAACCAGGAAAAATGGGCCCA...CTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CCA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGATGGGCCCATTTTTCCTaGTTTGTCATGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRWAHFS*FVMVVV
Trigger: CACCACCACCATGACAAACCAGGAAAAATGGGCCCA...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCTCCGAAGGGCTGAGGTaGGCCCATTTTTCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSSEGLR*AHFSWF
Trigger: AAACCAGGAAAAATGGGCCCACCTCAGCCCTTCGGA...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTCAGATGGATTACTTCTaGGGAACACGTATTTGCAGG +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFQMDYF*GTRICR
Trigger: CCTGCAAATACGTGTTCCCCAGAAGTAATCCATCTG...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTGGCACTTATCACACTTaGTTGGGCAGTTACCTTCAA +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFGTYHT*LGSYLQ
Trigger: TTGAAGGTAACTGCCCAACCAAGTGTGATAAGTGCC...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGAGGCAGAATCGCAACTaGAGGATGCTTGCCTACATT +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRRQNRN*RMLAYI
Trigger: AATGTAGGCAAGCATCCTCCAGTTGCGATTCTGCCT...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTGGAATCTGTGTGCAATaGAGGCATCCACGCCAATGG +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISGICVQ*RHPRQW
Trigger: CCATTGGCGTGGATGCCTCCATTGCACACAGATTCC...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGACTCTCCCCAAAGATTaGATCCTCCATGCATGCTTG +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRTLPKD*ILHACL
Trigger: CAAGCATGCATGGAGGATCCAATCTTTGGGGAGAGT...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTACTCTCCCCAAAGATTaGATCCTCCATGCATGCTTG +
Preference number: 4 (lower is better)
Translates to: LSFWLCPFKEVSLISSSITLPKD*ILHACL
Trigger: CAAGCATGCATGGAGGATCCAATCTTTGGGGAGAGT...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGACTCTCCCCAAAGATTaGATCCTCCATGCATGCTTG +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMTLPKD*ILHACL
Trigger: CAAGCATGCATGGAGGATCCAATCTTTGGGGAGAGT...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGCCCATCAATTTGCATTaGCAGAGACTTGCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRPINLH*QRLARP
Trigger: AGGACGAGCAAGTCTCTGCCAATGCAAATTGATGGG...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCGCAGGAGACTTGAAATaGTTCAAAGATTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACAGDLK*FKDFQH
Trigger: ATGCTGGAAATCTTTGAACCATTTCAAGTCTCCTGC...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCAAATTGGGGAAGAGTTaGGTGGGAGATGTAAAAATC +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACKLGKS*VGDVKI
Trigger: GATTTTTACATCTCCCACCCAACTCTTCCCCAATTT...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTCTGAAACTCCTGAAGTaGGCAGAGTCTGCAGTACCA +
Preference number: 4 (lower is better)
Translates to: FILSFWLCPFKEVSLISSLKLLK*AESAVP
Trigger: TGGTACTGCAGACTCTGCCCACTTCAGGAGTTTCAG...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR TCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATAAAAATTCCGAAGGGCTaGGGTGGGCCCATTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIKIPKG*GGPIFP
Trigger: AGGAAAAATGGGCCCACCTCAGCCCTTCGGAATTTT...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCAAAATTCCGAAGGGCTaGGGTGGGCCCATTTTTCCT +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSKIPKG*GGPIFP
Trigger: AGGAAAAATGGGCCCACCTCAGCCCTTCGGAATTTT...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCTACTCAGCATATTTCTaGAGTTGGGAAAATTCCGAA +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACYSAYF*SWENSE
Trigger: TTCGGAATTTTCCCAACTTCAGAAATATGCTGAGTA...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGGTTGTCATTCCTCCTTaGATCCATTCCTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVVVIPP*IHSSRD
Trigger: GTCTCTGGAGGAATGGATTCAAGGAGGAATGACAAC...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGACTTCACATAGGTCTTaGTGCAAGAGGGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKTSHRS*CKREVL
Trigger: GAGCACCTCCCTCTTGCATCAAGACCTATGTGAAGT...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCACTTCACATAGGTCTTaGTGCAAGAGGGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSTSHRS*CKREVL
Trigger: GAGCACCTCCCTCTTGCATCAAGACCTATGTGAAGT...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAAACTAAAAGTGGGTaGGTACCAGGCACAGGAGTG +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVKTKSG*VPGTGV
Trigger: CACTCCTGTGCCTGGTACTCACCCACTTTTAGTTTT...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCCACAGGCTAACACTCTaGAGTCAGGAACATCACGGA +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSHRLTL*SQEHHG
Trigger: TCCGTGATGTTCCTGACTTCAGAGTGTTAGCCTGTG...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGCACAGGCTAACACTCTaGAGTCAGGAACATCACGGA +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKHRLTL*SQEHHG
Trigger: TCCGTGATGTTCCTGACTTCAGAGTGTTAGCCTGTG...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCCTTCTTGCAGGTGGCTaGGAAAGTTTCAGATGTGCC +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSLLAGG*ESFRCA
Trigger: GGCACATCTGAAACTTTCTCAGCCACCTGCAAGAAG...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCACTCTTTGGCATCTGTaGCGGTGGTCCTTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSTLWHL*RWSFCQ
Trigger: CTGACAAAAGGACCACCGTCACAGATGCCAAAGAGT...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCTCATCTATTGAGCTTTaGTTGTGTTGTCTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACSSIEL*LCCLAY
Trigger: ATAAGCCAGACAACACAATCAAAGCTCAATAGATGA...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGGAACACCTTCAACAGTaGTCTAGGCTGTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHREHLQQ*SRLLFP
Trigger: TGGAAACAACAGCCTAGATCACTGTTGAAGGTGTTC...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTACAGCTACACTGAAGTaGAGCTGCATCCCATTATTT +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFTATLK*SCIPLF
Trigger: AAATAATGGGATGCAGCTTCACTTCAGTGTAGCTGT...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGGTTATACAGCTACACTaGAGTGAAGCTGCATCCCAT +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRVIQLH*SEAASH
Trigger: ATGGGATGCAGCTTCACTTCAGTGTAGCTGTATAAC...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCCAGGGGCAGTATACTTaGAGGGGCAAGTACATCAGT +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSQGQYT*RGKYIS
Trigger: ACTGATGTACTTGCCCCTTCAAGTATACTGCCCCTG...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGCAGGGGCAGTATACTTaGAGGGGCAAGTACATCAGT +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKQGQYT*RGKYIS
Trigger: ACTGATGTACTTGCCCCTTCAAGTATACTGCCCCTG...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTGTGGAAACACGTATGTaGTTCATTAGCCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIVETRM*FISPHW
Trigger: CCAGTGAGGGCTAATGAATCACATACGTGTTTCCAC...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCTTCAAGAATACAGTGTaGGATTCAAGGAGAATACAG +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACFKNTV*DSRRIQ
Trigger: CTGTATTCTCCTTGAATCTCACACTGTATTCTTGAA...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGTTGCGCAGAGGTCTATaGTTCAAAGATTCCACATGG +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMLRRGL*FKDSTW
Trigger: CCATGTGGAATCTTTGAAGCATAGACCTCTGCGCAA...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATAGCAGGTTTGTTAAAGTaGTTCAGTCGCCACACGTGC +
Preference number: 4 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIAGLLK*FSRHTC
Trigger: GCACGTGTGGCGACTGAAGCACTTTAACAAACCTGC...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGCATGGACTGTGTACTTaGAGAAGGAACAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKHGLCT*RRNSRG
Trigger: GCCTCTGCTGTTCCTTCTGCAAGTACACAGTCCATG...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCCATGGACTGTGTACTTaGAGAAGGAACAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSHGLCT*RRNSRG
Trigger: GCCTCTGCTGTTCCTTCTGCAAGTACACAGTCCATG...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTCATTGGCCTTTTCTATaGAATCCAAAACCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: LSFWLCPFKEVSLISSSIHWPFL*NPKPSP
Trigger: TGGGCTGGGTTTTGGATTGCATAGAAAAGGCCAATG...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR GCA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTCAACTGGAGGATGCTTaGCTACATTGGCCTTTTCTA +
Preference number: 4 (lower is better)
Translates to: LSFWLCPFKEVSLISSSIQLEDA*LHWPFL
Trigger: TAGAAAAGGCCAATGTAGGCAAGCATCCTCCAGTTG...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR GCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTATCGCAACTGGAGGATaGTTGCCTACATTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIIATGG*LPTLAF
Trigger: AAAGGCCAATGTAGGCAAGCATCCTCCAGTTGCGAT...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp GGGGCAGTGTCTGCCTTAAATAATACCTCATTCTGGAAAACACAATTAATTATGATCGCAACTGGAGGATaGTTGCCTACATTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: GAVSALNNTSFWKTQLIMIATGG*LPTLAF
Trigger: AAAGGCCAATGTAGGCAAGCATCCTCCAGTTGCGAT...CATAATTAATTGTGTTTTCCAGAATGAGGTATTATTTAAGGCAGACACTGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR GCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCAGATTGGATCCTCCATaGATGCTTGGTATATTCAAA +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACRLDPP*MLGIFK
Trigger: TTTGAATATACCAAGCATGCATGGAGGATCCAATCT...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCGGCTCCCCATCAATTTaGATTGGCAGAGACTTGCTC +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSGSPSI*IGRDLL
Trigger: GAGCAAGTCTCTGCCAATGCAAATTGATGGGGAGCC...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTTCTCCTAGATTCTCATaGAGAAAGGAACAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFSPRFS*RKEQGL
Trigger: CAAGCCTTGTTCCTTTCTGCATGAGAATCTAGGAGA...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGGAGGAGGGAGCTAATTaGATGCATGATTCGCTTCCA +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVEEGAN*MHDSLP
Trigger: TGGAAGCGAATCATGCATGCAATTAGCTCCCTCCTC...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCCTCTGTCTCCCAAAGTaGTGGGATTACAGGCGTAAG +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSLCLPK*WDYRRK
Trigger: CTTACGCCTGTAATCCCAGCACTTTGGGAGACAGAG...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTCAGGAGCACAAGAAGTaGAATCGTTGTCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIQEHKK*NRCHSS
Trigger: GGAGGAATGACAACGATTCCACTTCTTGTGCTCCTG...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTCAGGAGCACAAGAAGTaGAATCGTTGTCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: FILSFWLCPFKEVSLISSQEHKK*NRCHSS
Trigger: GGAGGAATGACAACGATTCCACTTCTTGTGCTCCTG...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTTATCACACTTGGTTaGGCAGTTACCTTCAACCCA +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMLITLG*AVTFNP
Trigger: TGGGTTGAAGGTAACTGCCCAACCAAGTGTGATAAG...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTCTTATCACACTTGGTTaGGCAGTTACCTTCAACCCA +
Preference number: 4 (lower is better)
Translates to: LSFWLCPFKEVSLISSSILITLG*AVTFNP
Trigger: TGGGTTGAAGGTAACTGCCCAACCAAGTGTGATAAG...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGGGCACTTATCACACTTaGTTGGGCAGTTACCTTCAA +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRGTYHT*LGSYLQ
Trigger: TTGAAGGTAACTGCCCAACCAAGTGTGATAAGTGCC...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTCAGAGTCAGTACCACTaGACAGATTGTTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISQSQYH*TDCCGW
Trigger: CCACCCACAACAATCTGTCCAGTGGTACTGACTCTG...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402815.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTCTGAAACTCCTGAAGTaGGCAGAGTCAGTACCACTG +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISLKLLK*AESVPL
Trigger: CAGTGGTACTGACTCTGCCCACTTCAGGAGTTTCAG...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402815.6
ENST00000407950.5
CDS-3UTR CCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGGTCAATCACTTTGTTTaGCTGCTGGGAACCACTCTT +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRVNHFV*LLGTTL
Trigger: AAGAGTGGTTCCCAGCAGCCAAACAAAGTGATTGAC...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTGTCAATCACTTTGTTTaGCTGCTGGGAACCACTCTT +
Preference number: 4 (lower is better)
Translates to: LSFWLCPFKEVSLISSSIVNHFV*LLGTTL
Trigger: AAGAGTGGTTCCCAGCAGCCAAACAAAGTGATTGAC...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CCA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGGCAGAATCGCAACTaGAGGATGCTTGCCTACATT +
Preference number: 4 (lower is better)
Translates to: FILSFWLCPFKEVSLISSRQNRN*RMLAYI
Trigger: AATGTAGGCAAGCATCCTCCAGTTGCGATTCTGCCT...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGGTAGCTTCTTGCAGGTaGCTGAGAAAGTTTCAGATG +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMVASCR*LRKFQM
Trigger: CATCTGAAACTTTCTCAGCCACCTGCAAGAAGCTAC...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGAACTCTCCCCAAAGATTaGATCCTCCATGCATGCTTG +
Preference number: 4 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRTLPKD*ILHACL
Trigger: CAAGCATGCATGGAGGATCCAATCTTTGGGGAGAGT...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTACTCTCCCCAAAGATTaGATCCTCCATGCATGCTTG +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGITLPKD*ILHACL
Trigger: CAAGCATGCATGGAGGATCCAATCTTTGGGGAGAGT...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGCCCATCAATTTGCATTaGCAGAGACTTGCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: FYTKLLAMSFQRGLPYLKPINLH*QRLARP
Trigger: AGGACGAGCAAGTCTCTGCCAATGCAAATTGATGGG...CTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCAGTCTGCAGTACCACTaGACAGATTGTTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSSLQYH*TDCCGW
Trigger: CCACCCACAACAATCTGTCCAGTGGTACTGCAGACT...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399322.7
ENST00000403951.6
CDS-3UTR CCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCCTGAAACTCCTGAAGTaGGCAGAGTCTGCAGTACCA +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSLKLLK*AESAVP
Trigger: TGGTACTGCAGACTCTGCCCACTTCAGGAGTTTCAG...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399322.7
ENST00000403951.6
CDS-3UTR TCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTTTAAAGAATGCAGTGTaGTGCAGGCGAAAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISLKNAV*CRRKLS
Trigger: GCTCAGCTTTCGCCTGCATCACACTGCATTCTTTAA...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402815.6
ENST00000407950.5
CDS-3UTR TCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGTTATGCAGTGTGATCTaGCACCAAACACAATGCAGT +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRLCSVI*HQTQCS
Trigger: ACTGCATTGTGTTTGGTGTCAGATCACACTGCATAA...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCAAAACTAAAAGTGGGTaGGTACCAGGCACAGGAGTG +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSKTKSG*VPGTGV
Trigger: CACTCCTGTGCCTGGTACTCACCCACTTTTAGTTTT...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGAAAACTAAAAGTGGGTaGGTACCAGGCACAGGAGTG +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKKTKSG*VPGTGV
Trigger: CACTCCTGTGCCTGGTACTCACCCACTTTTAGTTTT...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGTCCACCTGTCCAACATaGTTTCTGTGCTGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRSTCPT*FLCCFQ
Trigger: TTGAAAACAGCACAGAAATCATGTTGGACAGGTGGA...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGGGTTTCTTGTCCTTTTaGCGAGGGAGCAGAATAAAC +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVGFLSF*RGSRIN
Trigger: GTTTATTCTGCTCCCTCGTCAAAAGGACAAGAAACC...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGCATGAGCAGGAGACTTaGAATGGTTCAAAGATTTCC +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRHEQET*NGSKIS
Trigger: GGAAATCTTTGAACCATTTCAAGTCTCCTGCTCATG...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGGTTAAACCACTTCCATaGTTTTGCATGAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRVKPLP*FCMSRR
Trigger: TCTCCTGCTCATGCAAAATCATGGAAGTGGTTTAAC...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGACAGCTACACTGAAGTaGAGCTGCATCCCATTATTT +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRTATLK*SCIPLF
Trigger: AAATAATGGGATGCAGCTTCACTTCAGTGTAGCTGT...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTGTTATACAGCTACACTaGAGTGAAGCTGCATCCCAT +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIVIQLH*SEAASH
Trigger: ATGGGATGCAGCTTCACTTCAGTGTAGCTGTATAAC...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGGTGGAAACACGTATGTaGTTCATTAGCCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKVETRM*FISPHW
Trigger: CCAGTGAGGGCTAATGAATCACATACGTGTTTCCAC...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTTTGCGCAGAGGTCTATaGTTCAAAGATTCCACATGG +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGILRRGL*FKDSTW
Trigger: CCATGTGGAATCTTTGAAGCATAGACCTCTGCGCAA...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGAATCACTTTGTTTGGCTaGTGGGAACCACTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRITLFG*WEPLFS
Trigger: GGAAAAGAGTGGTTCCCAGCAGCCAAACAAAGTGAT...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGATCACTTTGTTTGGCTaGTGGGAACCACTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVITLFG*WEPLFS
Trigger: GGAAAAGAGTGGTTCCCAGCAGCCAAACAAAGTGAT...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TTTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGATCACTTTGTTTGGCTaGTGGGAACCACTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: FYTKLLAMSFQRGLPYLKITLFG*WEPLFS
Trigger: GGAAAAGAGTGGTTCCCAGCAGCCAAACAAAGTGAT...CTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR GCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGCATTGGCCTTTTCTATaGAATCCAAAACCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVHWPFL*NPKPSP
Trigger: TGGGCTGGGTTTTGGATTGCATAGAAAAGGCCAATG...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTCATTGGCCTTTTCTATaGAATCCAAAACCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIHWPFL*NPKPSP
Trigger: TGGGCTGGGTTTTGGATTGCATAGAAAAGGCCAATG...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGCAACTGGAGGATGCTTaGCTACATTGGCCTTTTCTA +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVQLEDA*LHWPFL
Trigger: TAGAAAAGGCCAATGTAGGCAAGCATCCTCCAGTTG...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCATCGCAACTGGAGGATaGTTGCCTACATTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSIATGG*LPTLAF
Trigger: AAAGGCCAATGTAGGCAAGCATCCTCCAGTTGCGAT...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGAATCTTGCTAGATCATTaGCAGTCCCAAGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRILLDH*QSQEAE
Trigger: TTCTGCCTCTTGGGACTGGCAATGATCTAGCAAGAT...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TTTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGATCTTGCTAGATCATTaGCAGTCCCAAGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: FYTKLLAMSFQRGLPYLKILLDH*QSQEAE
Trigger: TTCTGCCTCTTGGGACTGGCAATGATCTAGCAAGAT...CTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR GCA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCATCTATGGGAATGCATaGACCAAAAATATGCAGTAT +
Preference number: 4 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACIYGNA*TKNMQY
Trigger: ATACTGCATATTTTTGGTGCATGCATTCCCATAGAT...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGGAAAGGAACAAGGCTTaGCATATTACCACACTTGAC +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMERNKA*HITTLD
Trigger: GTCAAGTGTGGTAATATGGCAAGCCTTGTTCCTTTC...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGTCTCCTAGATTCTCATaGAGAAAGGAACAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRSPRFS*RKEQGL
Trigger: CAAGCCTTGTTCCTTTCTGCATGAGAATCTAGGAGA...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATAGAGGAGGGAGCTAATTaGATGCATGATTCGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIEEGAN*MHDSLP
Trigger: TGGAAGCGAATCATGCATGCAATTAGCTCCCTCCTC...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTTCTTCCCTGAAAAATTaGAACTACTTCCCATATGCC +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFSSLKN*NYFPYA
Trigger: GGCATATGGGAAGTAGTTGCAATTTTTCAGGGAAGA...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGGATATTGGAAGTCTGTaGAGTGTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVDIGSL*SVCVCV
Trigger: CACACACACACACACACTGCACAGACTTCCAATATC...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403951.6
CDS-3UTR CCA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTCAGATGGATTACTTCTaGGGAACACGTATTTGCAGG +
Preference number: 4 (lower is better)
Translates to: FILSFWLCPFKEVSLISSQMDYF*GTRICR
Trigger: CCTGCAAATACGTGTTCCCCAGAAGTAATCCATCTG...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGACAATGTCCTTCAGATaGATTACTTCTGGGGAACAC +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMTMSFR*ITSGEH
Trigger: GTGTTCCCCAGAAGTAATCCATCTGAAGGACATTGT...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGCAGGAGCACAAGAAGTaGAATCGTTGTCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKQEHKK*NRCHSS
Trigger: GGAGGAATGACAACGATTCCACTTCTTGTGCTCCTG...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTGGCACTTATCACACTTaGTTGGGCAGTTACCTTCAA +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIGTYHT*LGSYLQ
Trigger: TTGAAGGTAACTGCCCAACCAAGTGTGATAAGTGCC...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTGGCACTTATCACACTTaGTTGGGCAGTTACCTTCAA +
Preference number: 4 (lower is better)
Translates to: FILSFWLCPFKEVSLISSGTYHT*LGSYLQ
Trigger: TTGAAGGTAACTGCCCAACCAAGTGTGATAAGTGCC...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTGTGGGTGGTAAAATATaGTCCTTCAAAGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIVGGKI*SFKGPQ
Trigger: CTGTGGACCTTTGAAGGACCATATTTTACCACCCAC...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp GGGGCAGTGTCTGCCTTAAATAATACCTCATTCTGGAAAACACAATTAATTATGGTGGGTGGTAAAATATaGTCCTTCAAAGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: GAVSALNNTSFWKTQLIMVGGKI*SFKGPQ
Trigger: CTGTGGACCTTTGAAGGACCATATTTTACCACCCAC...CATAATTAATTGTGTTTTCCAGAATGAGGTATTATTTAAGGCAGACACTGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGACTTTGTTTGGCTGCTaGGAACCACTCTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRTLFGC*EPLFSF
Trigger: AAAGGAAAAGAGTGGTTCCCAGCAGCCAAACAAAGT...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGGTCAATCACTTTGTTTaGCTGCTGGGAACCACTCTT +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVVNHFV*LLGTTL
Trigger: AAGAGTGGTTCCCAGCAGCCAAACAAAGTGATTGAC...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTGATGCTTGCCTACATTaGCCTTTTCTATGCAATCCA +
Preference number: 4 (lower is better)
Translates to: LSFWLCPFKEVSLISSSIDACLH*PFLCNP
Trigger: TGGATTGCATAGAAAAGGCCAATGTAGGCAAGCATC...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGAGGCAGAATCGCAACTaGAGGATGCTTGCCTACATT +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKRQNRN*RMLAYI
Trigger: AATGTAGGCAAGCATCCTCCAGTTGCGATTCTGCCT...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGGATACTGTAAGGCACTaGGTCTCCTTTCTCATCTTT +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRDTVRH*VSFLIF
Trigger: AAAGATGAGAAAGGAGACCCAGTGCCTTACAGTATC...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGGTAGCTTCTTGCAGGTaGCTGAGAAAGTTTCAGATG +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVVASCR*LRKFQM
Trigger: CATCTGAAACTTTCTCAGCCACCTGCAAGAAGCTAC...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGGTAGCTTCTTGCAGGTaGCTGAGAAAGTTTCAGATG +
Preference number: 4 (lower is better)
Translates to: FYTKLLAMSFQRGLPYLKVASCR*LRKFQM
Trigger: CATCTGAAACTTTCTCAGCCACCTGCAAGAAGCTAC...CTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTTTCTCTATTCGTCGATaGCTTCGTCTTTTCTTAGAC +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFFSIRR*LRLFLD
Trigger: GTCTAAGAAAAGACGAAGCCATCGACGAATAGAGAA...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGCCCATCAATTTGCATTaGCAGAGACTTGCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKPINLH*QRLARP
Trigger: AGGACGAGCAAGTCTCTGCCAATGCAAATTGATGGG...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATACCCATCAATTTGCATTaGCAGAGACTTGCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIPINLH*QRLARP
Trigger: AGGACGAGCAAGTCTCTGCCAATGCAAATTGATGGG...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCCCCATCAATTTGCATTaGCAGAGACTTGCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSPINLH*QRLARP
Trigger: AGGACGAGCAAGTCTCTGCCAATGCAAATTGATGGG...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTAAATTGGGGAAGAGTTaGGTGGGAGATGTAAAAATC +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFKLGKS*VGDVKI
Trigger: GATTTTTACATCTCCCACCCAACTCTTCCCCAATTT...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGTTAGTAAAAGGAAATTaGGGAAGAGTTGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMLVKGN*GRVGWE
Trigger: CTCCCACCCAACTCTTCCCCAATTTCCTTTTACTAA...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTTCTGAAATGTCTCTCTaGAATCTCATCAACTCAGTG +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFSEMSL*NLINSV
Trigger: CACTGAGTTGATGAGATTCCAGAGAGACATTTCAGA...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR CAA 72 bp TCCCACTGTCTATCCAACAGCTTTCTACTGTACAGATaGTTAAGAATGATTCACAAACTGTTGCTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SHCLSNSFLLYR*LRMIHKLLLPS
Trigger: TGAAGGCAGCAACAGTTTGTGAATCATTCTTAACAATCTGTACAGTAGAAAGCTGTTGGATAGACAGTGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTTACTCAGCATATTTCTaGAGTTGGGAAAATTCCGAA +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFYSAYF*SWENSE
Trigger: TTCGGAATTTTCCCAACTTCAGAAATATGCTGAGTA...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGTTATGCAGTGTGATCTaGCACCAAACACAATGCAGT +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVLCSVI*HQTQCS
Trigger: ACTGCATTGTGTTTGGTGTCAGATCACACTGCATAA...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp TTTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTTATGCAGTGTGATCTaGCACCAAACACAATGCAGT +
Preference number: 4 (lower is better)
Translates to: FYTKLLAMSFQRGLPYLKLCSVI*HQTQCS
Trigger: ACTGCATTGTGTTTGGTGTCAGATCACACTGCATAA...CTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR TCA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTTTCCTTTTTCACTGTTaGTTGTCTTTCCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LSFWLCPFKEVSLISSSIFLFHC*LSFLRN
Trigger: GTTCCTGAGGAAAGACAATCAACAGTGAAAAAGGAA...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR TCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGTTCCTTTTTCACTGTTaGTTGTCTTTCCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMFLFHC*LSFLRN
Trigger: GTTCCTGAGGAAAGACAATCAACAGTGAAAAAGGAA...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp GGGGCAGTGTCTGCCTTAAATAATACCTCATTCTGGAAAACACAATTAATTATGTCCACCTGTCCAACATaGTTTCTGTGCTGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: GAVSALNNTSFWKTQLIMSTCPT*FLCCFQ
Trigger: TTGAAAACAGCACAGAAATCATGTTGGACAGGTGGA...CATAATTAATTGTGTTTTCCAGAATGAGGTATTATTTAAGGCAGACACTGCCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR TCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATAGAACACCTTCAACAGTaGTCTAGGCTGTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIEHLQQ*SRLLFP
Trigger: TGGAAACAACAGCCTAGATCACTGTTGAAGGTGTTC...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGTTCAAAATATGTTTTTaGCACAAAGCCTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVFKICF*HKACLP
Trigger: GGGCAGGCAGGCTTTGTGTCAAAAACATATTTTGAA...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTACAGCTACACTGAAGTaGAGCTGCATCCCATTATTT +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGITATLK*SCIPLF
Trigger: AAATAATGGGATGCAGCTTCACTTCAGTGTAGCTGT...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGTTCCCTCTTTGTTTCTaGCTGCTGTTAAGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKFPLCF*LLLSPA
Trigger: TGCTGGACTTAACAGCAGTCAGAAACAAAGAGGGAA...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTGGGTTATACGTGCCATaGAAAGTACATTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFGLYVP*KVHFPF
Trigger: AAAAGGAAAATGTACTTTTCATGGCACGTATAACCC...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATATATTGCTACTCTTGCTaGTGGAGCTCAGGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIYCYSC*WSSGEN
Trigger: ATTTTCCCCTGAGCTCCATCAGCAAGAGTAGCAATA...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403951.6
CDS-3UTR TCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTAAGAACTGTTGTCCATaGCTAACGCTCTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIKNCCP*LTLFFS
Trigger: ACTGAAGAAGAGCGTTAGTCATGGACAACAGTTCTT...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403951.6
CDS-3UTR GCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGTTGCGCAGAGGTCTATaGTTCAAAGATTCCACATGG +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKLRRGL*FKDSTW
Trigger: CCATGTGGAATCTTTGAAGCATAGACCTCTGCGCAA...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATATTGCGCAGAGGTCTATaGTTCAAAGATTCCACATGG +
Preference number: 4 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDILRRGL*FKDSTW
Trigger: CCATGTGGAATCTTTGAAGCATAGACCTCTGCGCAA...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTTTCAGGATTATACTTTaGAAGCACACCATTACCATG +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFFRIIL*KHTITM
Trigger: CATGGTAATGGTGTGCTTGCAAAGTATAATCCTGAA...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGCCACTCAAGGTATTCTaGAACATGCATCATCTGACT +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVPLKVF*NMHHLT
Trigger: AGTCAGATGATGCATGTTGCAGAATACCTTGAGTGG...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGACCACTCAAGGTATTCTaGAACATGCATCATCTGACT +
Preference number: 4 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRPLKVF*NMHHLT
Trigger: AGTCAGATGATGCATGTTGCAGAATACCTTGAGTGG...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTCCACTCAAGGTATTCTaGAACATGCATCATCTGACT +
Preference number: 4 (lower is better)
Translates to: FILSFWLCPFKEVSLISSPLKVF*NMHHLT
Trigger: AGTCAGATGATGCATGTTGCAGAATACCTTGAGTGG...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR GCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATACATTGGCCTTTTCTATaGAATCCAAAACCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIHWPFL*NPKPSP
Trigger: TGGGCTGGGTTTTGGATTGCATAGAAAAGGCCAATG...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTCAACTGGAGGATGCTTaGCTACATTGGCCTTTTCTA +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISQLEDA*LHWPFL
Trigger: TAGAAAAGGCCAATGTAGGCAAGCATCCTCCAGTTG...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGATCTTGCTAGATCATTaGCAGTCCCAAGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKILLDH*QSQEAE
Trigger: TTCTGCCTCTTGGGACTGGCAATGATCTAGCAAGAT...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTATCTTGCTAGATCATTaGCAGTCCCAAGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISILLDH*QSQEAE
Trigger: TTCTGCCTCTTGGGACTGGCAATGATCTAGCAAGAT...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGATTCATGTAGCTTCTTaGAGGTGGCTGAGAAAGTTT +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMIHVAS*RWLRKF
Trigger: AAACTTTCTCAGCCACCTGCAAGAAGCTACATGAAT...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGATTCATGTAGCTTCTTaGAGGTGGCTGAGAAAGTTT +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRIHVAS*RWLRKF
Trigger: AAACTTTCTCAGCCACCTGCAAGAAGCTACATGAAT...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGACTGAGATCTTGACTTaGAAACTTCAACTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMTEILT*KLQLFG
Trigger: GCCAAAGAGTTGAAGTTTGCAAGTCAAGATCTCAGT...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGACTGAGATCTTGACTTaGAAACTTCAACTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRTEILT*KLQLFG
Trigger: GCCAAAGAGTTGAAGTTTGCAAGTCAAGATCTCAGT...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGCACAGGATTATTCCTTaGTTCGGTTTCTTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRHRIIP*FGFLSF
Trigger: AAAGGACAAGAAACCGAAGCAAGGAATAATCCTGTG...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAGGGAGCTAATTGCATaGATGATTCGCTTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISRELIA*MIRFQE
Trigger: CTCTTGGAAGCGAATCATGCATGCAATTAGCTCCCT...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTACCAGCGCAAGTGATTaGTGTACTAAATTTGCAATT +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFTSASD*CTKFAI
Trigger: AATTGCAAATTTAGTACAGCAATCACTTGCGCTGGT...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGCAATGTTTAGCAGAGTaGATGTCTCTTTTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRQCLAE*MSLFPL
Trigger: AAGAGGGAAAAGAGACATGCACTCTGCTAAACATTG...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGTCTTCCCTGAAAAATTaGAACTACTTCCCATATGCC +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRSSLKN*NYFPYA
Trigger: GGCATATGGGAAGTAGTTGCAATTTTTCAGGGAAGA...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATACAGATGGATTACTTCTaGGGAACACGTATTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIQMDYF*GTRICR
Trigger: CCTGCAAATACGTGTTCCCCAGAAGTAATCCATCTG...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGCAGATGGATTACTTCTaGGGAACACGTATTTGCAGG +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKQMDYF*GTRICR
Trigger: CCTGCAAATACGTGTTCCCCAGAAGTAATCCATCTG...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCCAGATGGATTACTTCTaGGGAACACGTATTTGCAGG +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSQMDYF*GTRICR
Trigger: CCTGCAAATACGTGTTCCCCAGAAGTAATCCATCTG...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTACAATGTCCTTCAGATaGATTACTTCTGGGGAACAC +
Preference number: 4 (lower is better)
Translates to: FILSFWLCPFKEVSLISSTMSFR*ITSGEH
Trigger: GTGTTCCCCAGAAGTAATCCATCTGAAGGACATTGT...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CCA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGAACAATGTCCTTCAGATaGATTACTTCTGGGGAACAC +
Preference number: 4 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRTMSFR*ITSGEH
Trigger: GTGTTCCCCAGAAGTAATCCATCTGAAGGACATTGT...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTCATTTCATGGAGGATTaGATTAAGTTCAGTGACATC +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFHFMED*IKFSDI
Trigger: GATGTCACTGAACTTAATCCAATCCTCCATGAAATG...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGCTTATCACACTTGGTTaGGCAGTTACCTTCAACCCA +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKLITLG*AVTFNP
Trigger: TGGGTTGAAGGTAACTGCCCAACCAAGTGTGATAAG...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTGTGGGTGGTAAAATATaGTCCTTCAAAGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISVGGKI*SFKGPQ
Trigger: CTGTGGACCTTTGAAGGACCATATTTTACCACCCAC...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATAGTGGGTGGTAAAATATaGTCCTTCAAAGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIVGGKI*SFKGPQ
Trigger: CTGTGGACCTTTGAAGGACCATATTTTACCACCCAC...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGGTGGGTGGTAAAATATaGTCCTTCAAAGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKVGGKI*SFKGPQ
Trigger: CTGTGGACCTTTGAAGGACCATATTTTACCACCCAC...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGCTGGACAGATTGTTGTaGGTGGTAAAATATGGTCCT +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVLDRLL*VVKYGP
Trigger: AGGACCATATTTTACCACCCACAACAATCTGTCCAG...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTCTGGACAGATTGTTGTaGGTGGTAAAATATGGTCCT +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGILDRLL*VVKYGP
Trigger: AGGACCATATTTTACCACCCACAACAATCTGTCCAG...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGCTGGACAGATTGTTGTaGGTGGTAAAATATGGTCCT +
Preference number: 4 (lower is better)
Translates to: FYTKLLAMSFQRGLPYLKLDRLL*VVKYGP
Trigger: AGGACCATATTTTACCACCCACAACAATCTGTCCAG...CTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGACTTTGTTTGGCTGCTaGGAACCACTCTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVTLFGC*EPLFSF
Trigger: AAAGGAAAAGAGTGGTTCCCAGCAGCCAAACAAAGT...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTACTTTGTTTGGCTGCTaGGAACCACTCTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: FILSFWLCPFKEVSLISSTLFGC*EPLFSF
Trigger: AAAGGAAAAGAGTGGTTCCCAGCAGCCAAACAAAGT...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTGTCAATCACTTTGTTTaGCTGCTGGGAACCACTCTT +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISVNHFV*LLGTTL
Trigger: AAGAGTGGTTCCCAGCAGCCAAACAAAGTGATTGAC...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGGTCAATCACTTTGTTTaGCTGCTGGGAACCACTCTT +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKVNHFV*LLGTTL
Trigger: AAGAGTGGTTCCCAGCAGCCAAACAAAGTGATTGAC...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGGATGCTTGCCTACATTaGCCTTTTCTATGCAATCCA +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVDACLH*PFLCNP
Trigger: TGGATTGCATAGAAAAGGCCAATGTAGGCAAGCATC...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTGATACTGTAAGGCACTaGGTCTCCTTTCTCATCTTT +
Preference number: 4 (lower is better)
Translates to: FILSFWLCPFKEVSLISSDTVRH*VSFLIF
Trigger: AAAGATGAGAAAGGAGACCCAGTGCCTTACAGTATC...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCGTAGCTTCTTGCAGGTaGCTGAGAAAGTTTCAGATG +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSVASCR*LRKFQM
Trigger: CATCTGAAACTTTCTCAGCCACCTGCAAGAAGCTAC...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGGTAGCTTCTTGCAGGTaGCTGAGAAAGTTTCAGATG +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKVASCR*LRKFQM
Trigger: CATCTGAAACTTTCTCAGCCACCTGCAAGAAGCTAC...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGTTCTCTATTCGTCGATaGCTTCGTCTTTTCTTAGAC +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMFSIRR*LRLFLD
Trigger: GTCTAAGAAAAGACGAAGCCATCGACGAATAGAGAA...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTAATTTTTATTGTGCATaGGGTCTGCATCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGINFYCA*GLHPWL
Trigger: GAGCCATGGATGCAGACCCCATGCACAATAAAAATT...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTATCAGCATTGGGGCTTaGTTCTTGTGTGTAATTTTT +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFISIGA*FLCVIF
Trigger: AAAAATTACACACAAGAACCAAGCCCCAATGCTGAT...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGGCAGGAGACTTGAAATaGTTCAAAGATTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMAGDLK*FKDFQH
Trigger: ATGCTGGAAATCTTTGAACCATTTCAAGTCTCCTGC...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGAAATTGGGGAAGAGTTaGGTGGGAGATGTAAAAATC +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRKLGKS*VGDVKI
Trigger: GATTTTTACATCTCCCACCCAACTCTTCCCCAATTT...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGATTAGTAAAAGGAAATTaGGGAAGAGTTGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRLVKGN*GRVGWE
Trigger: CTCCCACCCAACTCTTCCCCAATTTCCTTTTACTAA...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGTTAGTAAAAGGAAATTaGGGAAGAGTTGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVLVKGN*GRVGWE
Trigger: CTCCCACCCAACTCTTCCCCAATTTCCTTTTACTAA...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGTCTGAAATGTCTCTCTaGAATCTCATCAACTCAGTG +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRSEMSL*NLINSV
Trigger: CACTGAGTTGATGAGATTCCAGAGAGACATTTCAGA...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGGTAAGCCATTGCGCCTaGCCACATTTTCCTTTTTAT +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVVSHCA*PHFPFY
Trigger: ATAAAAAGGAAAATGTGGCCAGGCGCAATGGCTTAC...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTAAACTTGTTGCTAAATaGCATGAAAAGGTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: LSFWLCPFKEVSLISSSIKLVAK*HEKVCS
Trigger: ACTGCACACCTTTTCATGTCATTTAGCAACAAGTTT...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR TCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGACCATTGGACTAGAATaGGGAAACTTGTTGCTAAAT +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRTIGLE*GNLLLN
Trigger: ATTTAGCAACAAGTTTCCTCATTCTAGTCCAATGGT...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTACCATTGGACTAGAATaGGGAAACTTGTTGCTAAAT +
Preference number: 4 (lower is better)
Translates to: LSFWLCPFKEVSLISSSITIGLE*GNLLLN
Trigger: ATTTAGCAACAAGTTTCCTCATTCTAGTCCAATGGT...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR TCA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGAGCAACATGCATCATCTaGCTGATGATATTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRATCII*LMIFSS
Trigger: GCTAGAAAATATCATCAGTCAGATGATGCATGTTGC...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTGCAACATGCATCATCTaGCTGATGATATTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: FILSFWLCPFKEVSLISSATCII*LMIFSS
Trigger: GCTAGAAAATATCATCAGTCAGATGATGCATGTTGC...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR TCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTTTCCTTTTTCACTGTTaGTTGTCTTTCCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIFLFHC*LSFLRN
Trigger: GTTCCTGAGGAAAGACAATCAACAGTGAAAAAGGAA...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCTCCACCTGTCCAACATaGTTTCTGTGCTGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSSTCPT*FLCCFQ
Trigger: TTGAAAACAGCACAGAAATCATGTTGGACAGGTGGA...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTTCCACCTGTCCAACATaGTTTCTGTGCTGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISSTCPT*FLCCFQ
Trigger: TTGAAAACAGCACAGAAATCATGTTGGACAGGTGGA...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGCATGAGCAGGAGACTTaGAATGGTTCAAAGATTTCC +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKHEQET*NGSKIS
Trigger: GGAAATCTTTGAACCATTTCAAGTCTCCTGCTCATG...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGGTTAAACCACTTCCATaGTTTTGCATGAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKVKPLP*FCMSRR
Trigger: TCTCCTGCTCATGCAAAATCATGGAAGTGGTTTAAC...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGACAAGTCATAGGTCACTaGTACACTGATTCTAAAAGG +
Preference number: 4 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRQVIGH*YTDSKR
Trigger: CCTTTTAGAATCAGTGTATCAGTGACCTATGACTTG...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGTTGAGAGCAGCTATTTaGTATAACAGCATTCAGTTG +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMLRAAI*YNSIQL
Trigger: CAACTGAATGCTGTTATATCAAATAGCTGCTCTCAA...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATATTCAAAATATGTTTTTaGCACAAAGCCTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIFKICF*HKACLP
Trigger: GGGCAGGCAGGCTTTGTGTCAAAAACATATTTTGAA...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGTATCAAGGTTTACTCTaGAATGTCTCTCTGGAATCT +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMYQGLL*NVSLES
Trigger: AGATTCCAGAGAGACATTTCAGAGTAAACCTTGATA...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTTTCAGGATTATACTTTaGAAGCACACCATTACCATG +
Preference number: 4 (lower is better)
Translates to: LSFWLCPFKEVSLISSSIFRIIL*KHTITM
Trigger: CATGGTAATGGTGTGCTTGCAAAGTATAATCCTGAA...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR GCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTCCACTCAAGGTATTCTaGAACATGCATCATCTGACT +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISPLKVF*NMHHLT
Trigger: AGTCAGATGATGCATGTTGCAGAATACCTTGAGTGG...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCCCACTCAAGGTATTCTaGAACATGCATCATCTGACT +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSPLKVF*NMHHLT
Trigger: AGTCAGATGATGCATGTTGCAGAATACCTTGAGTGG...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp GGGGCAGTGTCTGCCTTAAATAATACCTCATTCTGGAAAACACAATTAATTATGATTCATGTAGCTTCTTaGAGGTGGCTGAGAAAGTTT +
Preference number: 4 (lower is better)
Translates to: GAVSALNNTSFWKTQLIMIHVAS*RWLRKF
Trigger: AAACTTTCTCAGCCACCTGCAAGAAGCTACATGAAT...CATAATTAATTGTGTTTTCCAGAATGAGGTATTATTTAAGGCAGACACTGCCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR GCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGAGATTGGATCCTCCATaGATGCTTGGTATATTCAAA +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRRLDPP*MLGIFK
Trigger: TTTGAATATACCAAGCATGCATGGAGGATCCAATCT...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TTTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGACTGAGATCTTGACTTaGAAACTTCAACTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: FYTKLLAMSFQRGLPYLKTEILT*KLQLFG
Trigger: GCCAAAGAGTTGAAGTTTGCAAGTCAAGATCTCAGT...CTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR GCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGCACAGGATTATTCCTTaGTTCGGTTTCTTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVHRIIP*FGFLSF
Trigger: AAAGGACAAGAAACCGAAGCAAGGAATAATCCTGTG...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGGAAAGGAACAAGGCTTaGCATATTACCACACTTGAC +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKERNKA*HITTLD
Trigger: GTCAAGTGTGGTAATATGGCAAGCCTTGTTCCTTTC...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTGAAAGGAACAAGGCTTaGCATATTACCACACTTGAC +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISERNKA*HITTLD
Trigger: GTCAAGTGTGGTAATATGGCAAGCCTTGTTCCTTTC...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGTCTCCTAGATTCTCATaGAGAAAGGAACAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKSPRFS*RKEQGL
Trigger: CAAGCCTTGTTCCTTTCTGCATGAGAATCTAGGAGA...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATATCTCCTAGATTCTCATaGAGAAAGGAACAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDISPRFS*RKEQGL
Trigger: CAAGCCTTGTTCCTTTCTGCATGAGAATCTAGGAGA...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTGAAACTAATAAATCATaGAGTTCAGGCACTCGTTTT +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFETNKS*SSGTRF
Trigger: AAAACGAGTGCCTGAACTGCATGATTTATTAGTTTC...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGACAATGTTTAGCAGAGTaGATGTCTCTTTTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRQCLAE*MSLFPL
Trigger: AAGAGGGAAAAGAGACATGCACTCTGCTAAACATTG...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGACAATGTCCTTCAGATaGATTACTTCTGGGGAACAC +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKTMSFR*ITSGEH
Trigger: GTGTTCCCCAGAAGTAATCCATCTGAAGGACATTGT...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTACAATGTCCTTCAGATaGATTACTTCTGGGGAACAC +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISTMSFR*ITSGEH
Trigger: GTGTTCCCCAGAAGTAATCCATCTGAAGGACATTGT...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATACTGGACAGATTGTTGTaGGTGGTAAAATATGGTCCT +
Preference number: 4 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDILDRLL*VVKYGP
Trigger: AGGACCATATTTTACCACCCACAACAATCTGTCCAG...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGACTTTGTTTGGCTGCTaGGAACCACTCTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKTLFGC*EPLFSF
Trigger: AAAGGAAAAGAGTGGTTCCCAGCAGCCAAACAAAGT...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGGATGCTTGCCTACATTaGCCTTTTCTATGCAATCCA +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKDACLH*PFLCNP
Trigger: TGGATTGCATAGAAAAGGCCAATGTAGGCAAGCATC...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATAGATGCTTGCCTACATTaGCCTTTTCTATGCAATCCA +
Preference number: 4 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIDACLH*PFLCNP
Trigger: TGGATTGCATAGAAAAGGCCAATGTAGGCAAGCATC...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCGATGCTTGCCTACATTaGCCTTTTCTATGCAATCCA +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSDACLH*PFLCNP
Trigger: TGGATTGCATAGAAAAGGCCAATGTAGGCAAGCATC...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGGATACTGTAAGGCACTaGGTCTCCTTTCTCATCTTT +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKDTVRH*VSFLIF
Trigger: AAAGATGAGAAAGGAGACCCAGTGCCTTACAGTATC...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCGATACTGTAAGGCACTaGGTCTCCTTTCTCATCTTT +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSDTVRH*VSFLIF
Trigger: AAAGATGAGAAAGGAGACCCAGTGCCTTACAGTATC...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTTTCTCTATTCGTCGATaGCTTCGTCTTTTCTTAGAC +
Preference number: 4 (lower is better)
Translates to: FILSFWLCPFKEVSLISSFSIRR*LRLFLD
Trigger: GTCTAAGAAAAGACGAAGCCATCGACGAATAGAGAA...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGAATTTTTATTGTGCATaGGGTCTGCATCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKNFYCA*GLHPWL
Trigger: GAGCCATGGATGCAGACCCCATGCACAATAAAAATT...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAATTTTTATTGTGCATaGGGTCTGCATCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISNFYCA*GLHPWL
Trigger: GAGCCATGGATGCAGACCCCATGCACAATAAAAATT...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGATCAGCATTGGGGCTTaGTTCTTGTGTGTAATTTTT +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMISIGA*FLCVIF
Trigger: AAAAATTACACACAAGAACCAAGCCCCAATGCTGAT...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTAAATTGGGGAAGAGTTaGGTGGGAGATGTAAAAATC +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIKLGKS*VGDVKI
Trigger: GATTTTTACATCTCCCACCCAACTCTTCCCCAATTT...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTTTAGTAAAAGGAAATTaGGGAAGAGTTGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISLVKGN*GRVGWE
Trigger: CTCCCACCCAACTCTTCCCCAATTTCCTTTTACTAA...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTGAATCACGTTTCCCATaGTATTTCCTTTTTCATGTT +
Preference number: 4 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFESRFP*YFLFHV
Trigger: AACATGAAAAAGGAAATACCATGGGAAACGTGATTC...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGGTAAGCCATTGCGCCTaGCCACATTTTCCTTTTTAT +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKVSHCA*PHFPFY
Trigger: ATAAAAAGGAAAATGTGGCCAGGCGCAATGGCTTAC...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
3UTR CAA 72 bp TATAGGAATGTAAGTAACTTGAAGGAAATTACACTGTaGGTCTTGTTCATGTGTCTACTCCCAGTGCCAAAA +
Preference number: 4 (lower is better)
Translates to: YRNVSNLKEITL*VLFMCLLPVPK
Trigger: TTTTGGCACTGGGAGTAGACACATGAACAAGACCAACAGTGTAATTTCCTTCAAGTTACTTACATTCCTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR TCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTTACTCAGCATATTTCTaGAGTTGGGAAAATTCCGAA +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIYSAYF*SWENSE
Trigger: TTCGGAATTTTCCCAACTTCAGAAATATGCTGAGTA...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTTACTCAGCATATTTCTaGAGTTGGGAAAATTCCGAA +
Preference number: 4 (lower is better)
Translates to: FILSFWLCPFKEVSLISSYSAYF*SWENSE
Trigger: TTCGGAATTTTCCCAACTTCAGAAATATGCTGAGTA...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR TCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACTTGTTGCTAAATaGCATGAAAAGGTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVKLVAK*HEKVCS
Trigger: ACTGCACACCTTTTCATGTCATTTAGCAACAAGTTT...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTAAACTTGTTGCTAAATaGCATGAAAAGGTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIKLVAK*HEKVCS
Trigger: ACTGCACACCTTTTCATGTCATTTAGCAACAAGTTT...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGACCATTGGACTAGAATaGGGAAACTTGTTGCTAAAT +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVTIGLE*GNLLLN
Trigger: ATTTAGCAACAAGTTTCCTCATTCTAGTCCAATGGT...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATAGCAACATGCATCATCTaGCTGATGATATTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIATCII*LMIFSS
Trigger: GCTAGAAAATATCATCAGTCAGATGATGCATGTTGC...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTGCAACATGCATCATCTaGCTGATGATATTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISATCII*LMIFSS
Trigger: GCTAGAAAATATCATCAGTCAGATGATGCATGTTGC...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGGCAACATGCATCATCTaGCTGATGATATTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKATCII*LMIFSS
Trigger: GCTAGAAAATATCATCAGTCAGATGATGCATGTTGC...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCTTCCTTTTTCACTGTTaGTTGTCTTTCCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSFLFHC*LSFLRN
Trigger: GTTCCTGAGGAAAGACAATCAACAGTGAAAAAGGAA...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGTTCCTTTTTCACTGTTaGTTGTCTTTCCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKFLFHC*LSFLRN
Trigger: GTTCCTGAGGAAAGACAATCAACAGTGAAAAAGGAA...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGCAAGTCATAGGTCACTaGTACACTGATTCTAAAAGG +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKQVIGH*YTDSKR
Trigger: CCTTTTAGAATCAGTGTATCAGTGACCTATGACTTG...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATACAAGTCATAGGTCACTaGTACACTGATTCTAAAAGG +
Preference number: 4 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIQVIGH*YTDSKR
Trigger: CCTTTTAGAATCAGTGTATCAGTGACCTATGACTTG...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTCAAGTCATAGGTCACTaGTACACTGATTCTAAAAGG +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISQVIGH*YTDSKR
Trigger: CCTTTTAGAATCAGTGTATCAGTGACCTATGACTTG...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTTCATCTATTGAGCTTTaGTTGTGTTGTCTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGISSIEL*LCCLAY
Trigger: ATAAGCCAGACAACACAATCAAAGCTCAATAGATGA...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGATTGAGAGCAGCTATTTaGTATAACAGCATTCAGTTG +
Preference number: 4 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRLRAAI*YNSIQL
Trigger: CAACTGAATGCTGTTATATCAAATAGCTGCTCTCAA...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGTATCAAGGTTTACTCTaGAATGTCTCTCTGGAATCT +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVYQGLL*NVSLES
Trigger: AGATTCCAGAGAGACATTTCAGAGTAAACCTTGATA...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGGGGTTATACGTGCCATaGAAAGTACATTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVGLYVP*KVHFPF
Trigger: AAAAGGAAAATGTACTTTTCATGGCACGTATAACCC...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGTTCAGGATTATACTTTaGAAGCACACCATTACCATG +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVFRIIL*KHTITM
Trigger: CATGGTAATGGTGTGCTTGCAAAGTATAATCCTGAA...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGATTCAGGATTATACTTTaGAAGCACACCATTACCATG +
Preference number: 4 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRFRIIL*KHTITM
Trigger: CATGGTAATGGTGTGCTTGCAAAGTATAATCCTGAA...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATAATTCATGTAGCTTCTTaGAGGTGGCTGAGAAAGTTT +
Preference number: 4 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIIHVAS*RWLRKF
Trigger: AAACTTTCTCAGCCACCTGCAAGAAGCTACATGAAT...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCATTCATGTAGCTTCTTaGAGGTGGCTGAGAAAGTTT +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSIHVAS*RWLRKF
Trigger: AAACTTTCTCAGCCACCTGCAAGAAGCTACATGAAT...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTAGATTGGATCCTCCATaGATGCTTGGTATATTCAAA +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIRLDPP*MLGIFK
Trigger: TTTGAATATACCAAGCATGCATGGAGGATCCAATCT...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGATTGGATCCTCCATaGATGCTTGGTATATTCAAA +
Preference number: 4 (lower is better)
Translates to: FILSFWLCPFKEVSLISSRLDPP*MLGIFK
Trigger: TTTGAATATACCAAGCATGCATGGAGGATCCAATCT...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR GCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTACTGAGATCTTGACTTaGAAACTTCAACTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISTEILT*KLQLFG
Trigger: GCCAAAGAGTTGAAGTTTGCAAGTCAAGATCTCAGT...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGACTGAGATCTTGACTTaGAAACTTCAACTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKTEILT*KLQLFG
Trigger: GCCAAAGAGTTGAAGTTTGCAAGTCAAGATCTCAGT...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTCACAGGATTATTCCTTaGTTCGGTTTCTTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISHRIIP*FGFLSF
Trigger: AAAGGACAAGAAACCGAAGCAAGGAATAATCCTGTG...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCATGCACCAAAAATATaGAGTATCACTTCAGGTAAA +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMHAPKI*SITSGK
Trigger: TTTACCTGAAGTGATACTGCATATTTTTGGTGCATG...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTACCAGCGCAAGTGATTaGTGTACTAAATTTGCAATT +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGITSASD*CTKFAI
Trigger: AATTGCAAATTTAGTACAGCAATCACTTGCGCTGGT...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGACCAGCGCAAGTGATTaGTGTACTAAATTTGCAATT +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVTSASD*CTKFAI
Trigger: AATTGCAAATTTAGTACAGCAATCACTTGCGCTGGT...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGCAATGTTTAGCAGAGTaGATGTCTCTTTTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKQCLAE*MSLFPL
Trigger: AAGAGGGAAAAGAGACATGCACTCTGCTAAACATTG...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTATCTCATCAACTCAGTaGCTAGCAATGTTTAGCAGA +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISISSTQ*LAMFSR
Trigger: TCTGCTAAACATTGCTAGGCACTGAGTTGATGAGAT...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTTCTTCCCTGAAAAATTaGAACTACTTCCCATATGCC +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISSSLKN*NYFPYA
Trigger: GGCATATGGGAAGTAGTTGCAATTTTTCAGGGAAGA...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGACATTTCATGGAGGATTaGATTAAGTTCAGTGACATC +
Preference number: 4 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRHFMED*IKFSDI
Trigger: GATGTCACTGAACTTAATCCAATCCTCCATGAAATG...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp GGGGCAGTGTCTGCCTTAAATAATACCTCATTCTGGAAAACACAATTAATTATGCATTTCATGGAGGATTaGATTAAGTTCAGTGACATC +
Preference number: 4 (lower is better)
Translates to: GAVSALNNTSFWKTQLIMHFMED*IKFSDI
Trigger: GATGTCACTGAACTTAATCCAATCCTCCATGAAATG...CATAATTAATTGTGTTTTCCAGAATGAGGTATTATTTAAGGCAGACACTGCCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGCATTTCATGGAGGATTaGATTAAGTTCAGTGACATC +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVHFMED*IKFSDI
Trigger: GATGTCACTGAACTTAATCCAATCCTCCATGAAATG...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGTCTTCCATCATTTCATaGAGGATTGGATTAAGTTCA +
Preference number: 4 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMSSIIS*RIGLSS
Trigger: TGAACTTAATCCAATCCTCCATGAAATGATGGAAGA...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTTCTTCCATCATTTCATaGAGGATTGGATTAAGTTCA +
Preference number: 4 (lower is better)
Translates to: LSFWLCPFKEVSLISSSISSIIS*RIGLSS
Trigger: TGAACTTAATCCAATCCTCCATGAAATGATGGAAGA...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCTTCTCTATTCGTCGATaGCTTCGTCTTTTCTTAGAC +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSFSIRR*LRLFLD
Trigger: GTCTAAGAAAAGACGAAGCCATCGACGAATAGAGAA...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTATCAGCATTGGGGCTTaGTTCTTGTGTGTAATTTTT +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIISIGA*FLCVIF
Trigger: AAAAATTACACACAAGAACCAAGCCCCAATGCTGAT...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAGCATATGTGTTCCATaGCCCAATTATGCTAATTCA +
Preference number: 4 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVSICVP*PNYANS
Trigger: TGAATTAGCATAATTGGGCCATGGAACACATATGCT...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGGCAGGAGACTTGAAATaGTTCAAAGATTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKAGDLK*FKDFQH
Trigger: ATGCTGGAAATCTTTGAACCATTTCAAGTCTCCTGC...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCGCAGGAGACTTGAAATaGTTCAAAGATTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSAGDLK*FKDFQH
Trigger: ATGCTGGAAATCTTTGAACCATTTCAAGTCTCCTGC...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGGAATCACGTTTCCCATaGTATTTCCTTTTTCATGTT +
Preference number: 4 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRESRFP*YFLFHV
Trigger: AACATGAAAAAGGAAATACCATGGGAAACGTGATTC...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGTCTGAAATGTCTCTCTaGAATCTCATCAACTCAGTG +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKSEMSL*NLINSV
Trigger: CACTGAGTTGATGAGATTCCAGAGAGACATTTCAGA...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTTACTCAGCATATTTCTaGAGTTGGGAAAATTCCGAA +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISYSAYF*SWENSE
Trigger: TTCGGAATTTTCCCAACTTCAGAAATATGCTGAGTA...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAACTTGTTGCTAAATaGCATGAAAAGGTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISKLVAK*HEKVCS
Trigger: ACTGCACACCTTTTCATGTCATTTAGCAACAAGTTT...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGAAACTTGTTGCTAAATaGCATGAAAAGGTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKKLVAK*HEKVCS
Trigger: ACTGCACACCTTTTCATGTCATTTAGCAACAAGTTT...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCACCATTGGACTAGAATaGGGAAACTTGTTGCTAAAT +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSTIGLE*GNLLLN
Trigger: ATTTAGCAACAAGTTTCCTCATTCTAGTCCAATGGT...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTACCATTGGACTAGAATaGGGAAACTTGTTGCTAAAT +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISTIGLE*GNLLLN
Trigger: ATTTAGCAACAAGTTTCCTCATTCTAGTCCAATGGT...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR TCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTGCAGGTCAATATGAATaGACAATATTACAAGACTGC +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISAGQYE*TILQDC
Trigger: GCAGTCTTGTAATATTGTTCATTCATATTGACCTGC...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCGCAGGTCAATATGAATaGACAATATTACAAGACTGC +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSAGQYE*TILQDC
Trigger: GCAGTCTTGTAATATTGTTCATTCATATTGACCTGC...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGGCAGGTCAATATGAATaGACAATATTACAAGACTGC +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKAGQYE*TILQDC
Trigger: GCAGTCTTGTAATATTGTTCATTCATATTGACCTGC...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCTTGAGAGCAGCTATTTaGTATAACAGCATTCAGTTG +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSLRAAI*YNSIQL
Trigger: CAACTGAATGCTGTTATATCAAATAGCTGCTCTCAA...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGTATCAAGGTTTACTCTaGAATGTCTCTCTGGAATCT +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKYQGLL*NVSLES
Trigger: AGATTCCAGAGAGACATTTCAGAGTAAACCTTGATA...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTTTCAAGAATACAGTGTaGGATTCAAGGAGAATACAG +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISFKNTV*DSRRIQ
Trigger: CTGTATTCTCCTTGAATCTCACACTGTATTCTTGAA...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGTTCAAGAATACAGTGTaGGATTCAAGGAGAATACAG +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKFKNTV*DSRRIQ
Trigger: CTGTATTCTCCTTGAATCTCACACTGTATTCTTGAA...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR TCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCGGGTTATACGTGCCATaGAAAGTACATTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSGLYVP*KVHFPF
Trigger: AAAAGGAAAATGTACTTTTCATGGCACGTATAACCC...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAGATTGGATCCTCCATaGATGCTTGGTATATTCAAA +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISRLDPP*MLGIFK
Trigger: TTTGAATATACCAAGCATGCATGGAGGATCCAATCT...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTATCTATGGGAATGCATaGACCAAAAATATGCAGTAT +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIIYGNA*TKNMQY
Trigger: ATACTGCATATTTTTGGTGCATGCATTCCCATAGAT...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCCATTTCATGGAGGATTaGATTAAGTTCAGTGACATC +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSHFMED*IKFSDI
Trigger: GATGTCACTGAACTTAATCCAATCCTCCATGAAATG...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGATCTTCCATCATTTCATaGAGGATTGGATTAAGTTCA +
Preference number: 4 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRSSIIS*RIGLSS
Trigger: TGAACTTAATCCAATCCTCCATGAAATGATGGAAGA...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATAATCAGCATTGGGGCTTaGTTCTTGTGTGTAATTTTT +
Preference number: 4 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIISIGA*FLCVIF
Trigger: AAAAATTACACACAAGAACCAAGCCCCAATGCTGAT...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGAGCATATGTGTTCCATaGCCCAATTATGCTAATTCA +
Preference number: 4 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKSICVP*PNYANS
Trigger: TGAATTAGCATAATTGGGCCATGGAACACATATGCT...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCAGCATATGTGTTCCATaGCCCAATTATGCTAATTCA +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSSICVP*PNYANS
Trigger: TGAATTAGCATAATTGGGCCATGGAACACATATGCT...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTGAATCACGTTTCCCATaGTATTTCCTTTTTCATGTT +
Preference number: 4 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIESRFP*YFLFHV
Trigger: AACATGAAAAAGGAAATACCATGGGAAACGTGATTC...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCATCTATGGGAATGCATaGACCAAAAATATGCAGTAT +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSIYGNA*TKNMQY
Trigger: ATACTGCATATTTTTGGTGCATGCATTCCCATAGAT...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR GCA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATAATCTATGGGAATGCATaGACCAAAAATATGCAGTAT +
Preference number: 4 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIIYGNA*TKNMQY
Trigger: ATACTGCATATTTTTGGTGCATGCATTCCCATAGAT...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCGAAACTAATAAATCATaGAGTTCAGGCACTCGTTTT +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSETNKS*SSGTRF
Trigger: AAAACGAGTGCCTGAACTGCATGATTTATTAGTTTC...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR GCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTGAAACTAATAAATCATaGAGTTCAGGCACTCGTTTT +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISETNKS*SSGTRF
Trigger: AAAACGAGTGCCTGAACTGCATGATTTATTAGTTTC...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCTCTTCCATCATTTCATaGAGGATTGGATTAAGTTCA +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSSSIIS*RIGLSS
Trigger: TGAACTTAATCCAATCCTCCATGAAATGATGGAAGA...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTTCTTCCATCATTTCATaGAGGATTGGATTAAGTTCA +
Preference number: 4 (lower is better)
Translates to: SKISSICVPWPNYANSISSSIIS*RIGLSS
Trigger: TGAACTTAATCCAATCCTCCATGAAATGATGGAAGA...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CCA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCGAATCACGTTTCCCATaGTATTTCCTTTTTCATGTT +
Preference number: 4 (lower is better)
Translates to: TLILKGKRIAICNYDHCSESRFP*YFLFHV
Trigger: AACATGAAAAAGGAAATACCATGGGAAACGTGATTC...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGAGGAGGCGATTTaGGCGGCTGCAAGCACCAGCCCTGCCTATCTCTGGCTGCCGCTT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCVEEEAI*AAASTSPAYLWLPL
Trigger: AAGCGGCAGCCAGAGATAGGCAGGGCTGGTGCTTGCAGCCGCGCAAATCGCCTCCTCCTCAACACACACACACACACACACACACACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403951.6
ENST00000463981.2
CDS TCA 90 bp ACTGCCACCCCCTTCCAGAACACCCGGCCCATTGGAACTAGTGTCTaGAAGATGGAAATCTACTTCCAGGCAGCAACACAGGCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: TATPFQNTRPIGTSV*KMEIYFQAATQAAC
Trigger: GCAGGCAGCCTGTGTTGCTGCCTGGAAGTAGATTTCCATCTTTCAGACACTAGTTCCAATGGGCCGGGTGTTCTGGAAGGGGGTGGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403963.5
ENST00000467449.1
CDS GCA 90 bp AGGCCTCAGTCCCTCAGAGGCTATCGGCAGAAAGCCTTAGCTCCTTaGCATGCTGACTTTTCTGTGGAGCTGCTTGATCTCCTTATGACA +
Preference number: 5 (lower is better)
Translates to: RPQSLRGYRQKALAP*HADFSVELLDLLMT
Trigger: TGTCATAAGGAGATCAAGCAGCTCCACAGAAAAGTCAGCATGGCAAGGAGCTAAGGCTTTCTGCCGATAGCCTCTGAGGGACTGAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493142.1
CDS GCA 90 bp AGTGTTCCTTTTGGACTTCACATAGGTCTTGATGCAAGAGGGAGGTaGTCGAGCCACACAGCGCTCATGGACTGTGTACTTGCAGAAGGA +
Preference number: 5 (lower is better)
Translates to: SVPFGLHIGLDARGR*SSHTALMDCVLAEG
Trigger: TCCTTCTGCAAGTACACAGTCCATGAGCGCTGTGTGGCTCGAGCACCTCCCTCTTGCATCAAGACCTATGTGAAGTCCAAAAGGAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000403963.5
ENST00000406247.7
ENST00000407950.5
ENST00000477401.5
CDS CCA 90 bp AAGCAGAGACAGGTAACAGACAATGTCCTTCAGATGGATTACTTCTaGGGAACACGTATTTGCAGGAGAAGTAGTCCGGGGAGGGGTGAT +
Preference number: 5 (lower is better)
Translates to: KQRQVTDNVLQMDYF*GTRICRRSSPGRGD
Trigger: ATCACCCCTCCCCGGACTACTTCTCCTGCAAATACGTGTTCCCCAGAAGTAATCCATCTGAAGGACATTGTCTGTTACCTGTCTCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000403963.5
ENST00000406247.7
ENST00000407950.5
ENST00000464065.1
ENST00000471732.5
ENST00000477401.5
CDS-3UTR CAA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCTGCATTGGCAGAGACTaGCTCGTCCTGATGACCACG +
Preference number: 5 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACCIGRD*LVLMTT
Trigger: CGTGGTCATCAGGACGAGCAAGTCTCTGCCAATGCA...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS TCA 90 bp GTGAAACAACACAGGATTATTCCTTGCTTCGGTTTCTTGTCCTTTTaGCGAGGGAGCAGAATAAACCGGTTTTTGGAGGCGGGCCCATCA +
Preference number: 5 (lower is better)
Translates to: VKQHRIIPCFGFLSF*RGSRINRFLEAGPS
Trigger: TGATGGGCCCGCCTCCAAAAACCGGTTTATTCTGCTCCCTCGTCAAAAGGACAAGAAACCGAAGCAAGGAATAATCCTGTGTTGTTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCCCCCATCAATTTGCATaGGCAGAGACTTGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACPHQFA*AETCSS
Trigger: GGACGAGCAAGTCTCTGCCAATGCAAATTGATGGGG...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCAGAATAAACCGGTTTTaGGAGGCGGGCCCATCAGCA +
Preference number: 5 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACRINRF*EAGPSA
Trigger: TGCTGATGGGCCCGCCTCCAAAAACCGGTTTATTCT...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCCTGCTATTGCTACTCTaGCTGATGGAGCTCAGGGGA +
Preference number: 5 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACLLLLL*LMELRG
Trigger: TCCCCTGAGCTCCATCAGCAAGAGTAGCAATAGCAG...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403951.6
CDS-3UTR CAA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCGCAACTGGAGGATGCTaGCCTACATTGGCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACATGGC*PTLAFS
Trigger: AGAAAAGGCCAATGTAGGCAAGCATCCTCCAGTTGC...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCCATCTTGCTAGATCATaGCCAGTCCCAAGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACHLARS*PVPRGR
Trigger: TCTGCCTCTTGGGACTGGCAATGATCTAGCAAGATG...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTCCCATCGCAGGCATCTaGCTAGATCATTGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFPIAGI*LDHCQS
Trigger: GGACTGGCAATGATCTAGCAAGATGCCTGCGATGGG...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCGACTCTCCCCAAAGATaGGATCCTCCATGCATGCTT +
Preference number: 5 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACDSPQR*DPPCML
Trigger: AAGCATGCATGGAGGATCCAATCTTTGGGGAGAGTC...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCGCAAACTTCAACTCTTaGGCATCTGTGACGGTGGTC +
Preference number: 5 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACANFNS*ASVTVV
Trigger: GACCACCGTCACAGATGCCAAAGAGTTGAAGTTTGC...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS TCA 90 bp AGTTCAGTGACATCCCACTCAAGGTATTCTGCAACATGCATCATCTaGCTGATGATATTTTCTAGCTCCGAGCTGTCCAGGAAGCCATTC +
Preference number: 5 (lower is better)
Translates to: SSVTSHSRYSATCII*LMIFSSSELSRKPF
Trigger: GAATGGCTTCCTGGACAGCTCGGAGCTAGAAAATATCATCAGTCAGATGATGCATGTTGCAGAATACCTTGAGTGGGATGTCACTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000403963.5
ENST00000406247.7
ENST00000407950.5
ENST00000464065.1
ENST00000477401.5
CDS GCA 90 bp GTGACCTGCAGGCCTTGTCCATCTACAGTAACAGAGTTGGCTCTTTaGATTTTATTCTTGTCAATCACTTTGTTTGGCTGCTGGGAACCA +
Preference number: 5 (lower is better)
Translates to: VTCRPCPSTVTELAL*ILFLSITLFGCWEP
Trigger: TGGTTCCCAGCAGCCAAACAAAGTGATTGACAAGAATAAAATGCAAAGAGCCAACTCTGTTACTGTAGATGGACAAGGCCTGCAGGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000403963.5
ENST00000406247.7
ENST00000407950.5
ENST00000471732.5
CDS-3UTR CAA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCTGTCAATCACTTTGTTaGGCTGCTGGGAACCACTCT +
Preference number: 5 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACCQSLC*AAGNHS
Trigger: AGAGTGGTTCCCAGCAGCCAAACAAAGTGATTGACA...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCGGATGCTTGCCTACATaGGCCTTTTCTATGCAATCC +
Preference number: 5 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACGCLPT*AFSMQS
Trigger: GGATTGCATAGAAAAGGCCAATGTAGGCAAGCATCC...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGCCCATCGCAGGCATCTaGCTAGATCATTGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRPIAGI*LDHCQS
Trigger: GGACTGGCAATGATCTAGCAAGATGCCTGCGATGGG...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTTGCATTGGCAGAGACTaGCTCGTCCTGATGACCACG +
Preference number: 5 (lower is better)
Translates to: LSFWLCPFKEVSLISSSICIGRD*LVLMTT
Trigger: CGTGGTCATCAGGACGAGCAAGTCTCTGCCAATGCA...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS GCA 90 bp CATACCTGCAGGCCTTGTCCATCTACAGTAACAGAGTTGGCTCTTTaGATTTTATTCTTGTCAATCACTTTGTTTGGCTGCTGGGAACCA +
Preference number: 5 (lower is better)
Translates to: HTCRPCPSTVTELAL*ILFLSITLFGCWEP
Trigger: TGGTTCCCAGCAGCCAAACAAAGTGATTGACAAGAATAAAATGCAAAGAGCCAACTCTGTTACTGTAGATGGACAAGGCCTGCAGGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477401.5
CDS-3UTR CAA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCTTCTTTATTCAGGTGTaGCGCAGAGGTCTATGCTTC +
Preference number: 5 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACFFIQV*RRGLCF
Trigger: GAAGCATAGACCTCTGCGCAACACCTGAATAAAGAA...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCCAAGAAGTGGAATCGTaGTCATTCCTCCTTGAATCC +
Preference number: 5 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACQEVES*SFLLES
Trigger: GGATTCAAGGAGGAATGACAACGATTCCACTTCTTG...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCTTCTTGTCAATCACTTaGTTTGGCTGCTGGGAACCA +
Preference number: 5 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACFLSIT*FGCWEP
Trigger: TGGTTCCCAGCAGCCAAACAAAGTGATTGACAAGAA...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCAGTTTAACCCTGGCATaGGTCCATTTCCAGAAAGAC +
Preference number: 5 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACSLTLA*VHFQKD
Trigger: GTCTTTCTGGAAATGGACCAATGCCAGGGTTAAACT...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTCCCATCGCAGGCATCTaGCTAGATCATTGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIPIAGI*LDHCQS
Trigger: GGACTGGCAATGATCTAGCAAGATGCCTGCGATGGG...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp GGGGCAGTGTCTGCCTTAAATAATACCTCATTCTGGAAAACACAATTAATTATGCCCATCGCAGGCATCTaGCTAGATCATTGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: GAVSALNNTSFWKTQLIMPIAGI*LDHCQS
Trigger: GGACTGGCAATGATCTAGCAAGATGCCTGCGATGGG...CATAATTAATTGTGTTTTCCAGAATGAGGTATTATTTAAGGCAGACACTGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTGCAAACTTCAACTCTTaGGCATCTGTGACGGTGGTC +
Preference number: 5 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFANFNS*ASVTVV
Trigger: GACCACCGTCACAGATGCCAAAGAGTTGAAGTTTGC...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTTGCATTGGCAGAGACTaGCTCGTCCTGATGACCACG +
Preference number: 5 (lower is better)
Translates to: LVLRNNWNHTENHVSHGICIGRD*LVLMTT
Trigger: CGTGGTCATCAGGACGAGCAAGTCTCTGCCAATGCA...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTTGGCTCCCCATCAATTaGCATTGGCAGAGACTTGCT +
Preference number: 5 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFWLPIN*HWQRLA
Trigger: AGCAAGTCTCTGCCAATGCAAATTGATGGGGAGCCA...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGAGAATAAACCGGTTTTaGGAGGCGGGCCCATCAGCA +
Preference number: 5 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMRINRF*EAGPSA
Trigger: TGCTGATGGGCCCGCCTCCAAAAACCGGTTTATTCT...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCCGGTTTCTTGTCCTTTaGACGAGGGAGCAGAATAAA +
Preference number: 5 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACRFLVL*TREQNK
Trigger: TTTATTCTGCTCCCTCGTCAAAAGGACAAGAAACCG...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTCGTTGTCATTCCTCCTaGAATCCATTCCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFRCHSS*NPFLQR
Trigger: TCTCTGGAGGAATGGATTCAAGGAGGAATGACAACG...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTAGTGACCTGCAGGCCTaGTCCATCTACAGTAACAGA +
Preference number: 5 (lower is better)
Translates to: LSFWLCPFKEVSLISSSISDLQA*SIYSNR
Trigger: TCTGTTACTGTAGATGGACAAGGCCTGCAGGTCACT...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGGCAACTGGAGGATGCTaGCCTACATTGGCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRATGGC*PTLAFS
Trigger: AGAAAAGGCCAATGTAGGCAAGCATCCTCCAGTTGC...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATACCCATCGCAGGCATCTaGCTAGATCATTGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIPIAGI*LDHCQS
Trigger: GGACTGGCAATGATCTAGCAAGATGCCTGCGATGGG...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGGACTCTCCCCAAAGATaGGATCCTCCATGCATGCTT +
Preference number: 5 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRDSPQR*DPPCML
Trigger: AAGCATGCATGGAGGATCCAATCTTTGGGGAGAGTC...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTGACTCTCCCCAAAGATaGGATCCTCCATGCATGCTT +
Preference number: 5 (lower is better)
Translates to: LSFWLCPFKEVSLISSSIDSPQR*DPPCML
Trigger: AAGCATGCATGGAGGATCCAATCTTTGGGGAGAGTC...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGTGCATTGGCAGAGACTaGCTCGTCCTGATGACCACG +
Preference number: 5 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKCIGRD*LVLMTT
Trigger: CGTGGTCATCAGGACGAGCAAGTCTCTGCCAATGCA...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTTGCATTGGCAGAGACTaGCTCGTCCTGATGACCACG +
Preference number: 5 (lower is better)
Translates to: SKISSICVPWPNYANSISCIGRD*LVLMTT
Trigger: CGTGGTCATCAGGACGAGCAAGTCTCTGCCAATGCA...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTCCCCATCAATTTGCATaGGCAGAGACTTGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIPHQFA*AETCSS
Trigger: GGACGAGCAAGTCTCTGCCAATGCAAATTGATGGGG...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp GGGGCAGTGTCTGCCTTAAATAATACCTCATTCTGGAAAACACAATTAATTATGCCCCATCAATTTGCATaGGCAGAGACTTGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: GAVSALNNTSFWKTQLIMPHQFA*AETCSS
Trigger: GGACGAGCAAGTCTCTGCCAATGCAAATTGATGGGG...CATAATTAATTGTGTTTTCCAGAATGAGGTATTATTTAAGGCAGACACTGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAGAATAAACCGGTTTTaGGAGGCGGGCCCATCAGCA +
Preference number: 5 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVRINRF*EAGPSA
Trigger: TGCTGATGGGCCCGCCTCCAAAAACCGGTTTATTCT...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTAGAATAAACCGGTTTTaGGAGGCGGGCCCATCAGCA +
Preference number: 5 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIRINRF*EAGPSA
Trigger: TGCTGATGGGCCCGCCTCCAAAAACCGGTTTATTCT...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGACCAGGGGCAGTATACTaGAAGGGGCAAGTACATCAG +
Preference number: 5 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRPGAVY*KGQVHQ
Trigger: CTGATGTACTTGCCCCTTCAAGTATACTGCCCCTGG...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGCCAGGGGCAGTATACTaGAAGGGGCAAGTACATCAG +
Preference number: 5 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVPGAVY*KGQVHQ
Trigger: CTGATGTACTTGCCCCTTCAAGTATACTGCCCCTGG...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCTTATGTCAAGACGCGTaGATATTGGAAGTCTGTGCA +
Preference number: 5 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACLCQDA*ILEVCA
Trigger: TGCACAGACTTCCAATATCAACGCGTCTTGACATAA...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403951.6
CDS TCA 90 bp CCGCCTGATAGGAGAGCAGGCTTACTTTTTACCATTGGACTAGAATaGGGAAACTTGTTGCTAAATGACATGAAAAGGTGTGCAGTGAAA +
Preference number: 5 (lower is better)
Translates to: PPDRRAGLLFTIGLE*GNLLLNDMKRCAVK
Trigger: TTTCACTGCACACCTTTTCATGTCATTTAGCAACAAGTTTCCTCATTCTAGTCCAATGGTAAAAAGTAAGCCTGCTCTCCTATCAGGCGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000403963.5
ENST00000406247.7
ENST00000407950.5
ENST00000471732.5
ENST00000477401.5
CDS-3UTR CAA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGAAGAACACCCGGCCCATaGGAACTAGTGTCTGAAAGA +
Preference number: 5 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRRTPGP*ELVSER
Trigger: TCTTTCAGACACTAGTTCCAATGGGCCGGGTGTTCT...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407950.5
CDS-3UTR CAA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCCTTCAGGATTATACTTaGCAAGCACACCATTACCAT +
Preference number: 5 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACLQDYT*QAHHYH
Trigger: ATGGTAATGGTGTGCTTGCAAAGTATAATCCTGAAG...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGCGTTGTCATTCCTCCTaGAATCCATTCCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRRCHSS*NPFLQR
Trigger: TCTCTGGAGGAATGGATTCAAGGAGGAATGACAACG...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTCGTTGTCATTCCTCCTaGAATCCATTCCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: LSFWLCPFKEVSLISSSIRCHSS*NPFLQR
Trigger: TCTCTGGAGGAATGGATTCAAGGAGGAATGACAACG...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTCAAGAAGTGGAATCGTaGTCATTCCTCCTTGAATCC +
Preference number: 5 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFQEVES*SFLLES
Trigger: GGATTCAAGGAGGAATGACAACGATTCCACTTCTTG...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTACTTATCACACTTGGTaGGGCAGTTACCTTCAACCC +
Preference number: 5 (lower is better)
Translates to: LSFWLCPFKEVSLISSSITYHTW*GSYLQP
Trigger: GGGTTGAAGGTAACTGCCCAACCAAGTGTGATAAGT...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGTGGCACTTATCACACTaGGTTGGGCAGTTACCTTCA +
Preference number: 5 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMWHLSH*VGQLPS
Trigger: TGAAGGTAACTGCCCAACCAAGTGTGATAAGTGCCA...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTCCACTGGACAGATTGTaGTGGGTGGTAAAATATGGT +
Preference number: 5 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFPLDRL*WVVKYG
Trigger: ACCATATTTTACCACCCACAACAATCTGTCCAGTGG...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGTGTCAATCACTTTGTTaGGCTGCTGGGAACCACTCT +
Preference number: 5 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRCQSLC*AAGNHS
Trigger: AGAGTGGTTCCCAGCAGCCAAACAAAGTGATTGACA...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp CTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTATTTGTCAATCACTTTGTTaGGCTGCTGGGAACCACTCT +
Preference number: 5 (lower is better)
Translates to: LSFWLCPFKEVSLISSSICQSLC*AAGNHS
Trigger: AGAGTGGTTCCCAGCAGCCAAACAAAGTGATTGACA...AATACTACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTTTCTTGTCAATCACTTaGTTTGGCTGCTGGGAACCA +
Preference number: 5 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFFLSIT*FGCWEP
Trigger: TGGTTCCCAGCAGCCAAACAAAGTGATTGACAAGAA...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGAAGTGACCTGCAGGCCTaGTCCATCTACAGTAACAGA +
Preference number: 5 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRSDLQA*SIYSNR
Trigger: TCTGTTACTGTAGATGGACAAGGCCTGCAGGTCACT...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAGTGACCTGCAGGCCTaGTCCATCTACAGTAACAGA +
Preference number: 5 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVSDLQA*SIYSNR
Trigger: TCTGTTACTGTAGATGGACAAGGCCTGCAGGTCACT...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTAGTGACCTGCAGGCCTaGTCCATCTACAGTAACAGA +
Preference number: 5 (lower is better)
Translates to: LVLRNNWNHTENHVSHGISDLQA*SIYSNR
Trigger: TCTGTTACTGTAGATGGACAAGGCCTGCAGGTCACT...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTAGTTTAACCCTGGCATaGGTCCATTTCCAGAAAGAC +
Preference number: 5 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFSLTLA*VHFQKD
Trigger: GTCTTTCTGGAAATGGACCAATGCCAGGGTTAAACT...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp GTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAAACAACACAGGGGATGCTTGCCTACATaGGCCTTTTCTATGCAATCC +
Preference number: 5 (lower is better)
Translates to: VFHGPIMLIQFLRVKQHRGCLPT*AFSMQS
Trigger: GGATTGCATAGAAAAGGCCAATGTAGGCAAGCATCC...CCTGTGTTGTTTCACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTGCAACTGGAGGATGCTaGCCTACATTGGCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIATGGC*PTLAFS
Trigger: AGAAAAGGCCAATGTAGGCAAGCATCCTCCAGTTGC...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTGCAACTGGAGGATGCTaGCCTACATTGGCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: FILSFWLCPFKEVSLISSATGGC*PTLAFS
Trigger: AGAAAAGGCCAATGTAGGCAAGCATCCTCCAGTTGC...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGCATCTTGCTAGATCATaGCCAGTCCCAAGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVHLARS*PVPRGR
Trigger: TCTGCCTCTTGGGACTGGCAATGATCTAGCAAGATG...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGACATCTTGCTAGATCATaGCCAGTCCCAAGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRHLARS*PVPRGR
Trigger: TCTGCCTCTTGGGACTGGCAATGATCTAGCAAGATG...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTCATCTTGCTAGATCATaGCCAGTCCCAAGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: FILSFWLCPFKEVSLISSHLARS*PVPRGR
Trigger: TCTGCCTCTTGGGACTGGCAATGATCTAGCAAGATG...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp TTTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGGCAAACTTCAACTCTTaGGCATCTGTGACGGTGGTC +
Preference number: 5 (lower is better)
Translates to: FYTKLLAMSFQRGLPYLKANFNS*ASVTVV
Trigger: GACCACCGTCACAGATGCCAAAGAGTTGAAGTTTGC...CTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGGCAAACTTCAACTCTTaGGCATCTGTGACGGTGGTC +
Preference number: 5 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVANFNS*ASVTVV
Trigger: GACCACCGTCACAGATGCCAAAGAGTTGAAGTTTGC...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATACCCCATCAATTTGCATaGGCAGAGACTTGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIPHQFA*AETCSS
Trigger: GGACGAGCAAGTCTCTGCCAATGCAAATTGATGGGG...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGATGGCTCCCCATCAATTaGCATTGGCAGAGACTTGCT +
Preference number: 5 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRWLPIN*HWQRLA
Trigger: AGCAAGTCTCTGCCAATGCAAATTGATGGGGAGCCA...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp GGGGCAGTGTCTGCCTTAAATAATACCTCATTCTGGAAAACACAATTAATTATGTGGCTCCCCATCAATTaGCATTGGCAGAGACTTGCT +
Preference number: 5 (lower is better)
Translates to: GAVSALNNTSFWKTQLIMWLPIN*HWQRLA
Trigger: AGCAAGTCTCTGCCAATGCAAATTGATGGGGAGCCA...CATAATTAATTGTGTTTTCCAGAATGAGGTATTATTTAAGGCAGACACTGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS GCA 90 bp AGAAGCTCTGTCACATACCAGGTAAAAGATTCTTTATTCAGGTGTTaGGCAGAGGTCTATGCTTCAAAGATTCCACATGGCATGTTTCAT +
Preference number: 5 (lower is better)
Translates to: RSSVTYQVKDSLFRC*AEVYASKIPHGMFH
Trigger: ATGAAACATGCCATGTGGAATCTTTGAAGCATAGACCTCTGCGCAACACCTGAATAAAGAATCTTTTACCTGGTATGTGACAGAGCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000403963.5
ENST00000407950.5
ENST00000437998.1
ENST00000463981.2
ENST00000477401.5
CDS-3UTR CAA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCCCACATGAAACTGCTTaGGATGCTTGTAATTTCAAT +
Preference number: 5 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACPHETA*DACNFN
Trigger: ATTGAAATTACAAGCATCCAAAGCAGTTTCATGTGG...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGCGTTGTCATTCCTCCTaGAATCCATTCCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVRCHSS*NPFLQR
Trigger: TCTCTGGAGGAATGGATTCAAGGAGGAATGACAACG...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGACTTATCACACTTGGTaGGGCAGTTACCTTCAACCC +
Preference number: 5 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVTYHTW*GSYLQP
Trigger: GGGTTGAAGGTAACTGCCCAACCAAGTGTGATAAGT...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGATGGCACTTATCACACTaGGTTGGGCAGTTACCTTCA +
Preference number: 5 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRWHLSH*VGQLPS
Trigger: TGAAGGTAACTGCCCAACCAAGTGTGATAAGTGCCA...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTGGCACTTATCACACTaGGTTGGGCAGTTACCTTCA +
Preference number: 5 (lower is better)
Translates to: FYTKLLAMSFQRGLPYLKWHLSH*VGQLPS
Trigger: TGAAGGTAACTGCCCAACCAAGTGTGATAAGTGCCA...CTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTGTACCACTGGACAGATaGTTGTGGGTGGTAAAATAT +
Preference number: 5 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFVPLDR*LWVVKY
Trigger: ATATTTTACCACCCACAACAATCTGTCCAGTGGTAC...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTTGTCAATCACTTTGTTaGGCTGCTGGGAACCACTCT +
Preference number: 5 (lower is better)
Translates to: LVLRNNWNHTENHVSHGICQSLC*AAGNHS
Trigger: AGAGTGGTTCCCAGCAGCCAAACAAAGTGATTGACA...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGTGTCAATCACTTTGTTaGGCTGCTGGGAACCACTCT +
Preference number: 5 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVCQSLC*AAGNHS
Trigger: AGAGTGGTTCCCAGCAGCCAAACAAAGTGATTGACA...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCAGTGACCTGCAGGCCTaGTCCATCTACAGTAACAGA +
Preference number: 5 (lower is better)
Translates to: TLILKGKRIAICNYDHCSSDLQA*SIYSNR
Trigger: TCTGTTACTGTAGATGGACAAGGCCTGCAGGTCACT...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGAGTTTAACCCTGGCATaGGTCCATTTCCAGAAAGAC +
Preference number: 5 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMSLTLA*VHFQKD
Trigger: GTCTTTCTGGAAATGGACCAATGCCAGGGTTAAACT...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTGGATGCTTGCCTACATaGGCCTTTTCTATGCAATCC +
Preference number: 5 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIGCLPT*AFSMQS
Trigger: GGATTGCATAGAAAAGGCCAATGTAGGCAAGCATCC...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGGGATGCTTGCCTACATaGGCCTTTTCTATGCAATCC +
Preference number: 5 (lower is better)
Translates to: FYTKLLAMSFQRGLPYLKGCLPT*AFSMQS
Trigger: GGATTGCATAGAAAAGGCCAATGTAGGCAAGCATCC...CTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATAGCAACTGGAGGATGCTaGCCTACATTGGCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIATGGC*PTLAFS
Trigger: AGAAAAGGCCAATGTAGGCAAGCATCCTCCAGTTGC...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTCATCTTGCTAGATCATaGCCAGTCCCAAGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: SKISSICVPWPNYANSISHLARS*PVPRGR
Trigger: TCTGCCTCTTGGGACTGGCAATGATCTAGCAAGATG...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTGACTCTCCCCAAAGATaGGATCCTCCATGCATGCTT +
Preference number: 5 (lower is better)
Translates to: SKISSICVPWPNYANSISDSPQR*DPPCML
Trigger: AAGCATGCATGGAGGATCCAATCTTTGGGGAGAGTC...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGGCAAACTTCAACTCTTaGGCATCTGTGACGGTGGTC +
Preference number: 5 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKANFNS*ASVTVV
Trigger: GACCACCGTCACAGATGCCAAAGAGTTGAAGTTTGC...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATATGGCTCCCCATCAATTaGCATTGGCAGAGACTTGCT +
Preference number: 5 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIWLPIN*HWQRLA
Trigger: AGCAAGTCTCTGCCAATGCAAATTGATGGGGAGCCA...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGTGGCTCCCCATCAATTaGCATTGGCAGAGACTTGCT +
Preference number: 5 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKWLPIN*HWQRLA
Trigger: AGCAAGTCTCTGCCAATGCAAATTGATGGGGAGCCA...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp AGGAAATTGGGGAAGAGTTGGGTGGGAGATGTAAAAATCTATGGGAATGCATGCATTGGGGCTTGGTTCTaGTGTGTAATTTTTATTGTG +
Preference number: 5 (lower is better)
Translates to: RKLGKSWVGDVKIYGNACIGAWF*CVIFIV
Trigger: CACAATAAAAATTACACACAAGAACCAAGCCCCAAT...GCATGCATTCCCATAGATTTTTACATCTCCCACCCAACTCTTCCCCAATTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTCTTCAAAATATGTTTTaGACACAAAGCCTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFLQNMF*TQSLPA
Trigger: GGCAGGCAGGCTTTGTGTCAAAAACATATTTTGAAG...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGCAAGACGCGTTGATATaGGAAGTCTGTGCAGTGTGT +
Preference number: 5 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVQDALI*EVCAVC
Trigger: ACACACTGCACAGACTTCCAATATCAACGCGTCTTG...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403951.6
CDS TCA 90 bp CTTACTTTTTACCATTGGACTAGAATGAGGAAACTTGTTGCTAAATaGCATGAAAAGGTGTGCAGTGAAATCATCAGGAAGCTCGGCTTC +
Preference number: 5 (lower is better)
Translates to: LTFYHWTRMRKLVAK*HEKVCSEIIRKLGF
Trigger: GAAGCCGAGCTTCCTGATGATTTCACTGCACACCTTTTCATGTCATTTAGCAACAAGTTTCCTCATTCTAGTCCAATGGTAAAAAGTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000403963.5
ENST00000406247.7
ENST00000407950.5
ENST00000471732.5
ENST00000477401.5
CDS GCA 90 bp TCTGTACTCCATCACATTCTATTTCTACAGATTCATGTAGCTTCTTaGAGGTGGCTGAGAAAGTTTCAGATGTGCCAAACTCAAAATACC +
Preference number: 5 (lower is better)
Translates to: SVLHHILFLQIHVAS*RWLRKFQMCQTQNT
Trigger: GGTATTTTGAGTTTGGCACATCTGAAACTTTCTCAGCCACCTGCAAGAAGCTACATGAATCTGTAGAAATAGAATGTGATGGAGTACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000403963.5
ENST00000406247.7
ENST00000407950.5
CDS-3UTR CAA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGTTCTTTATTCAGGTGTaGCGCAGAGGTCTATGCTTC +
Preference number: 5 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVFFIQV*RRGLCF
Trigger: GAAGCATAGACCTCTGCGCAACACCTGAATAAAGAA...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp GGGGCAGTGTCTGCCTTAAATAATACCTCATTCTGGAAAACACAATTAATTATGTTCTTTATTCAGGTGTaGCGCAGAGGTCTATGCTTC +
Preference number: 5 (lower is better)
Translates to: GAVSALNNTSFWKTQLIMFFIQV*RRGLCF
Trigger: GAAGCATAGACCTCTGCGCAACACCTGAATAAAGAA...CATAATTAATTGTGTTTTCCAGAATGAGGTATTATTTAAGGCAGACACTGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGAGCATATTTCTGAAGTaGGGAAAATTCCGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMSIFLK*GKFRRA
Trigger: AGCCCTTCGGAATTTTCCCAACTTCAGAAATATGCT...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp GTTCTATGTAGATACCTCCCTTCCTATCTCTTAGAAGCGTGGATATCAAGGTTTCTTCAGGATTATACTTaGCAAGCACACCATTACCAT +
Preference number: 5 (lower is better)
Translates to: VLCRYLPSYLLEAWISRFLQDYT*QAHHYH
Trigger: ATGGTAATGGTGTGCTTGCAAAGTATAATCCTGAAG...AAACCTTGATATCCACGCTTCTAAGAGATAGGAAGGGAGGTATCTACATAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTCAAGAAGTGGAATCGTaGTCATTCCTCCTTGAATCC +
Preference number: 5 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIQEVES*SFLLES
Trigger: GGATTCAAGGAGGAATGACAACGATTCCACTTCTTG...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGCAAGAAGTGGAATCGTaGTCATTCCTCCTTGAATCC +
Preference number: 5 (lower is better)
Translates to: FYTKLLAMSFQRGLPYLKQEVES*SFLLES
Trigger: GGATTCAAGGAGGAATGACAACGATTCCACTTCTTG...CTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCACTTATCACACTTGGTaGGGCAGTTACCTTCAACCC +
Preference number: 5 (lower is better)
Translates to: TLILKGKRIAICNYDHCSTYHTW*GSYLQP
Trigger: GGGTTGAAGGTAACTGCCCAACCAAGTGTGATAAGT...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGACTTATCACACTTGGTaGGGCAGTTACCTTCAACCC +
Preference number: 5 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKTYHTW*GSYLQP
Trigger: GGGTTGAAGGTAACTGCCCAACCAAGTGTGATAAGT...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATATGGCACTTATCACACTaGGTTGGGCAGTTACCTTCA +
Preference number: 5 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIWHLSH*VGQLPS
Trigger: TGAAGGTAACTGCCCAACCAAGTGTGATAAGTGCCA...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGTGGCACTTATCACACTaGGTTGGGCAGTTACCTTCA +
Preference number: 5 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKWHLSH*VGQLPS
Trigger: TGAAGGTAACTGCCCAACCAAGTGTGATAAGTGCCA...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGACCACTGGACAGATTGTaGTGGGTGGTAAAATATGGT +
Preference number: 5 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRPLDRL*WVVKYG
Trigger: ACCATATTTTACCACCCACAACAATCTGTCCAGTGG...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTCCACTGGACAGATTGTaGTGGGTGGTAAAATATGGT +
Preference number: 5 (lower is better)
Translates to: FILSFWLCPFKEVSLISSPLDRL*WVVKYG
Trigger: ACCATATTTTACCACCCACAACAATCTGTCCAGTGG...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTTTCTTGTCAATCACTTaGTTTGGCTGCTGGGAACCA +
Preference number: 5 (lower is better)
Translates to: FILSFWLCPFKEVSLISSFLSIT*FGCWEP
Trigger: TGGTTCCCAGCAGCCAAACAAAGTGATTGACAAGAA...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGGTAAATTCGTTCTCCTaGTTTTCCACCACTTTTGGG +
Preference number: 5 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMVNSFS*FSTTFG
Trigger: CCCAAAAGTGGTGGAAAACAAGGAGAACGAATTTAC...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAGTTTAACCCTGGCATaGGTCCATTTCCAGAAAGAC +
Preference number: 5 (lower is better)
Translates to: FILSFWLCPFKEVSLISSSLTLA*VHFQKD
Trigger: GTCTTTCTGGAAATGGACCAATGCCAGGGTTAAACT...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp TTTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGGATTCATGTAGCTTCTaGCAGGTGGCTGAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: FYTKLLAMSFQRGLPYLKDSCSF*QVAEKV
Trigger: AACTTTCTCAGCCACCTGCAAGAAGCTACATGAATC...CTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGCTGGTCACTGAGATCTaGACTTGCAAACTTCAACTC +
Preference number: 5 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVLVTEI*TCKLQL
Trigger: GAGTTGAAGTTTGCAAGTCAAGATCTCAGTGACCAG...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGACTGGTCACTGAGATCTaGACTTGCAAACTTCAACTC +
Preference number: 5 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRLVTEI*TCKLQL
Trigger: GAGTTGAAGTTTGCAAGTCAAGATCTCAGTGACCAG...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTCTGGTCACTGAGATCTaGACTTGCAAACTTCAACTC +
Preference number: 5 (lower is better)
Translates to: FILSFWLCPFKEVSLISSLVTEI*TCKLQL
Trigger: GAGTTGAAGTTTGCAAGTCAAGATCTCAGTGACCAG...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTCTGGTCACTGAGATCTaGACTTGCAAACTTCAACTC +
Preference number: 5 (lower is better)
Translates to: LVLRNNWNHTENHVSHGILVTEI*TCKLQL
Trigger: GAGTTGAAGTTTGCAAGTCAAGATCTCAGTGACCAG...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp AGACTTGAAATGGTTCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGACACAGGATTATTCCTaGCTTCGGTTTCTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: RLEMVQRFPAYVFHGPIMTQDYS*LRFLVL
Trigger: AAGGACAAGAAACCGAAGCAAGGAATAATCCTGTGT...CATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGAACCATTTCAAGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTTTCTTTATTCAGGTGTaGCGCAGAGGTCTATGCTTC +
Preference number: 5 (lower is better)
Translates to: SKISSICVPWPNYANSISFFIQV*RRGLCF
Trigger: GAAGCATAGACCTCTGCGCAACACCTGAATAAAGAA...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTAGCATATTTCTGAAGTaGGGAAAATTCCGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: LVLRNNWNHTENHVSHGISIFLK*GKFRRA
Trigger: AGCCCTTCGGAATTTTCCCAACTTCAGAAATATGCT...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGAAGCATATTTCTGAAGTaGGGAAAATTCCGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRSIFLK*GKFRRA
Trigger: AGCCCTTCGGAATTTTCCCAACTTCAGAAATATGCT...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGAGCATATTTCTGAAGTaGGGAAAATTCCGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: FYTKLLAMSFQRGLPYLKSIFLK*GKFRRA
Trigger: AGCCCTTCGGAATTTTCCCAACTTCAGAAATATGCT...CTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCCCACTGGACAGATTGTaGTGGGTGGTAAAATATGGT +
Preference number: 5 (lower is better)
Translates to: TLILKGKRIAICNYDHCSPLDRL*WVVKYG
Trigger: ACCATATTTTACCACCCACAACAATCTGTCCAGTGG...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTCCACTGGACAGATTGTaGTGGGTGGTAAAATATGGT +
Preference number: 5 (lower is better)
Translates to: SKISSICVPWPNYANSISPLDRL*WVVKYG
Trigger: ACCATATTTTACCACCCACAACAATCTGTCCAGTGG...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGAGTACCACTGGACAGATaGTTGTGGGTGGTAAAATAT +
Preference number: 5 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRVPLDR*LWVVKY
Trigger: ATATTTTACCACCCACAACAATCTGTCCAGTGGTAC...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGGTACCACTGGACAGATaGTTGTGGGTGGTAAAATAT +
Preference number: 5 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVVPLDR*LWVVKY
Trigger: ATATTTTACCACCCACAACAATCTGTCCAGTGGTAC...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTGTACCACTGGACAGATaGTTGTGGGTGGTAAAATAT +
Preference number: 5 (lower is better)
Translates to: FILSFWLCPFKEVSLISSVPLDR*LWVVKY
Trigger: ATATTTTACCACCCACAACAATCTGTCCAGTGGTAC...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCTTCTTGTCAATCACTTaGTTTGGCTGCTGGGAACCA +
Preference number: 5 (lower is better)
Translates to: TLILKGKRIAICNYDHCSFLSIT*FGCWEP
Trigger: TGGTTCCCAGCAGCCAAACAAAGTGATTGACAAGAA...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGTTCTTGTCAATCACTTaGTTTGGCTGCTGGGAACCA +
Preference number: 5 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKFLSIT*FGCWEP
Trigger: TGGTTCCCAGCAGCCAAACAAAGTGATTGACAAGAA...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTGTAAATTCGTTCTCCTaGTTTTCCACCACTTTTGGG +
Preference number: 5 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIVNSFS*FSTTFG
Trigger: CCCAAAAGTGGTGGAAAACAAGGAGAACGAATTTAC...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTGTAAATTCGTTCTCCTaGTTTTCCACCACTTTTGGG +
Preference number: 5 (lower is better)
Translates to: FILSFWLCPFKEVSLISSVNSFS*FSTTFG
Trigger: CCCAAAAGTGGTGGAAAACAAGGAGAACGAATTTAC...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGAGTTTAACCCTGGCATaGGTCCATTTCCAGAAAGAC +
Preference number: 5 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKSLTLA*VHFQKD
Trigger: GTCTTTCTGGAAATGGACCAATGCCAGGGTTAAACT...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCGATTCATGTAGCTTCTaGCAGGTGGCTGAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: TLILKGKRIAICNYDHCSDSCSF*QVAEKV
Trigger: AACTTTCTCAGCCACCTGCAAGAAGCTACATGAATC...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTGATTCATGTAGCTTCTaGCAGGTGGCTGAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: SKISSICVPWPNYANSISDSCSF*QVAEKV
Trigger: AACTTTCTCAGCCACCTGCAAGAAGCTACATGAATC...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATACTGGTCACTGAGATCTaGACTTGCAAACTTCAACTC +
Preference number: 5 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDILVTEI*TCKLQL
Trigger: GAGTTGAAGTTTGCAAGTCAAGATCTCAGTGACCAG...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGCGGTTTCTTGTCCTTTaGACGAGGGAGCAGAATAAA +
Preference number: 5 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKRFLVL*TREQNK
Trigger: TTTATTCTGCTCCCTCGTCAAAAGGACAAGAAACCG...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATACGGTTTCTTGTCCTTTaGACGAGGGAGCAGAATAAA +
Preference number: 5 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIRFLVL*TREQNK
Trigger: TTTATTCTGCTCCCTCGTCAAAAGGACAAGAAACCG...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGAACACAGGATTATTCCTaGCTTCGGTTTCTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRTQDYS*LRFLVL
Trigger: AAGGACAAGAAACCGAAGCAAGGAATAATCCTGTGT...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTCTTCAAAATATGTTTTaGACACAAAGCCTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: LVLRNNWNHTENHVSHGILQNMF*TQSLPA
Trigger: GGCAGGCAGGCTTTGTGTCAAAAACATATTTTGAAG...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp TTTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGCTTCAGGATTATACTTaGCAAGCACACCATTACCAT +
Preference number: 5 (lower is better)
Translates to: FYTKLLAMSFQRGLPYLKLQDYT*QAHHYH
Trigger: ATGGTAATGGTGTGCTTGCAAAGTATAATCCTGAAG...CTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTGTACCACTGGACAGATaGTTGTGGGTGGTAAAATAT +
Preference number: 5 (lower is better)
Translates to: SKISSICVPWPNYANSISVPLDR*LWVVKY
Trigger: ATATTTTACCACCCACAACAATCTGTCCAGTGGTAC...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGGTAAATTCGTTCTCCTaGTTTTCCACCACTTTTGGG +
Preference number: 5 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKVNSFS*FSTTFG
Trigger: CCCAAAAGTGGTGGAAAACAAGGAGAACGAATTTAC...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATAGTAAATTCGTTCTCCTaGTTTTCCACCACTTTTGGG +
Preference number: 5 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIVNSFS*FSTTFG
Trigger: CCCAAAAGTGGTGGAAAACAAGGAGAACGAATTTAC...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCACACAGGATTATTCCTaGCTTCGGTTTCTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: TLILKGKRIAICNYDHCSTQDYS*LRFLVL
Trigger: AAGGACAAGAAACCGAAGCAAGGAATAATCCTGTGT...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTACACAGGATTATTCCTaGCTTCGGTTTCTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: SKISSICVPWPNYANSISTQDYS*LRFLVL
Trigger: AAGGACAAGAAACCGAAGCAAGGAATAATCCTGTGT...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGAATCCATGCACAGGATaGTGTTCAACAGAATCACTA +
Preference number: 5 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVNPCTG*CSTESL
Trigger: TAGTGATTCTGTTGAACACAATCCTGTGCATGGATT...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTAATCCATGCACAGGATaGTGTTCAACAGAATCACTA +
Preference number: 5 (lower is better)
Translates to: LVLRNNWNHTENHVSHGINPCTG*CSTESL
Trigger: TAGTGATTCTGTTGAACACAATCCTGTGCATGGATT...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGAAATCCATGCACAGGATaGTGTTCAACAGAATCACTA +
Preference number: 5 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRNPCTG*CSTESL
Trigger: TAGTGATTCTGTTGAACACAATCCTGTGCATGGATT...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTTTCCATTATAGCACATaGCTTGAGAGCAGCTATTTG +
Preference number: 5 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIFHYST*LESSYL
Trigger: CAAATAGCTGCTCTCAAGCAATGTGCTATAATGGAA...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGTTCCATTATAGCACATaGCTTGAGAGCAGCTATTTG +
Preference number: 5 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVFHYST*LESSYL
Trigger: CAAATAGCTGCTCTCAAGCAATGTGCTATAATGGAA...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp CTTCTATTTCGTTATTGGTGTGGTTATGAATTCTCTCCTAGATTCTCATGCAGAAGCAGGTTGTTTAATTaGTCTCATCCCACTGTCTAT +
Preference number: 5 (lower is better)
Translates to: LLFRYWCGYEFSPRFSCRSRLFN*SHPTVY
Trigger: ATAGACAGTGGGATGAGACAAATTAAACAACCTGCT...TCTGCATGAGAATCTAGGAGAGAATTCATAACCACACCAATAACGAAATAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp TTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAAGAGTGCCACATGAAACTGCTTaGGATGCTTGTAATTTCAAT +
Preference number: 5 (lower is better)
Translates to: FPAYVFHGPIMLIQFLRVPHETA*DACNFN
Trigger: ATTGAAATTACAAGCATCCAAAGCAGTTTCATGTGG...CACTCTTAGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATACTTCAGGATTATACTTaGCAAGCACACCATTACCAT +
Preference number: 5 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDILQDYT*QAHHYH
Trigger: ATGGTAATGGTGTGCTTGCAAAGTATAATCCTGAAG...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGCTTCAGGATTATACTTaGCAAGCACACCATTACCAT +
Preference number: 5 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKLQDYT*QAHHYH
Trigger: ATGGTAATGGTGTGCTTGCAAAGTATAATCCTGAAG...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp TTAGTGCTTCGTAATAATTGGAATCACACTGAGAATCACGTTTCCCATGGTATTATTGGGGCTTGGTTCTaGTGTGTAATTTTTATTGTG +
Preference number: 5 (lower is better)
Translates to: LVLRNNWNHTENHVSHGIIGAWF*CVIFIV
Trigger: CACAATAAAAATTACACACAAGAACCAAGCCCCAAT...AATACCATGGGAAACGTGATTCTCAGTGTGATTCCAATTATTACGAAGCACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGTTCCATTATAGCACATaGCTTGAGAGCAGCTATTTG +
Preference number: 5 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKFHYST*LESSYL
Trigger: CAAATAGCTGCTCTCAAGCAATGTGCTATAATGGAA...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTAGCAGGTTGTTTAATTaGTCTCATCCCACTGTCTAT +
Preference number: 5 (lower is better)
Translates to: SKISSICVPWPNYANSISSRLFN*SHPTVY
Trigger: ATAGACAGTGGGATGAGACAAATTAAACAACCTGCT...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGTGTGTTAAAGAACTGTaGTCCATGACTAACGCTCTT +
Preference number: 5 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKCVKEL*SMTNAL
Trigger: AAGAGCGTTAGTCATGGACAACAGTTCTTTAACACA...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403951.6
CDS-3UTR CAA 90 bp TTTATACTAAGCTTTTGGCTATGTCCTTTCAAAGAGGTCTCCCTTATCTCAAGTAAGGAAATTACACTGTaGGTCTTGTTCATGTGTCTA +
Preference number: 5 (lower is better)
Translates to: FILSFWLCPFKEVSLISSKEITL*VLFMCL
Trigger: TAGACACATGAACAAGACCAACAGTGTAATTTCCTT...ACTTGAGATAAGGGAGACCTCTTTGAAAGGACATAGCCAAAAGCTTAGTATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406247.7
CDS-3UTR CAA 90 bp TCACAAACTGTTGCTGCCTTCAAACTATATACTATAAAAGGTAGCCAAGACATACCACATGAAACTGCTTaGGATGCTTGTAATTTCAAT +
Preference number: 5 (lower is better)
Translates to: SQTVAAFKLYTIKGSQDIPHETA*DACNFN
Trigger: ATTGAAATTACAAGCATCCAAAGCAGTTTCATGTGG...TATGTCTTGGCTACCTTTTATAGTATATAGTTTGAAGGCAGCAACAGTTTGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
CDS-3UTR CAA 90 bp TCAAAGATTTCCAGCATATGTGTTCCATGGCCCAATTATGCTAATTCAATTTCTCCACATGAAACTGCTTaGGATGCTTGTAATTTCAAT +
Preference number: 5 (lower is better)
Translates to: SKISSICVPWPNYANSISPHETA*DACNFN
Trigger: ATTGAAATTACAAGCATCCAAAGCAGTTTCATGTGG...AGAAATTGAATTAGCATAATTGGGCCATGGAACACATATGCTGGAAATCTTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp ACACTGATTCTAAAAGGGAAACGTATAGCAATCTGCAATTATGATCATTGTAGCATTGGGGCTTGGTTCTaGTGTGTAATTTTTATTGTG +
Preference number: 5 (lower is better)
Translates to: TLILKGKRIAICNYDHCSIGAWF*CVIFIV
Trigger: CACAATAAAAATTACACACAAGAACCAAGCCCCAAT...GCTACAATGATCATAATTGCAGATTGCTATACGTTTCCCTTTTAGAATCAGTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS-3UTR CAA 90 bp CAGCATGAGAAAACCTTATGCCTGATATTTTTATTTCCACTCAGAAGAGTTAAGATTGGGGCTTGGTTCTaGTGTGTAATTTTTATTGTG +
Preference number: 5 (lower is better)
Translates to: QHEKTLCLIFLFPLRRVKIGAWF*CVIFIV
Trigger: CACAATAAAAATTACACACAAGAACCAAGCCCCAAT...CTTAACTCTTCTGAGTGGAAATAAAAATATCAGGCATAAGGTTTTCTCATGCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS TCA 72 bp AGAGACTTGCTCGTCCTGATGACCACGCAGGAGCACTaGGCCAGCCGCCGGCCAGCACTTTTCAGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: RDLLVLMTTQEH*ASRRPALFRPV
Trigger: CACAGGCCTGAAAAGTGCTGGCCGGCGGCTGGCTCAGTGCTCCTGCGTGGTCATCAGGACGAGCAAGTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000406247.7
ENST00000407950.5
ENST00000493142.1
CDS CCA 72 bp ATGCAAGAGGGAGGTGCTCGAGCCACACAGCGCTCATaGACTGTGTACTTGCAGAAGGAACAGCAGAGGCCC +
Preference number: 6 (lower is better)
Translates to: MQEGGARATQRS*TVYLQKEQQRP
Trigger: GGGCCTCTGCTGTTCCTTCTGCAAGTACACAGTCCATGAGCGCTGTGTGGCTCGAGCACCTCCCTCTTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000403963.5
ENST00000406247.7
ENST00000407950.5
ENST00000477401.5
CDS GCA 72 bp TGGACTGTGTACTTGCAGAAGGAACAGCAGAGGCCCTaGTTCCCCACGCCAATCAGCATGTTCAGGCAAAGG +
Preference number: 6 (lower is better)
Translates to: WTVYLQKEQQRP*FPTPISMFRQR
Trigger: CCTTTGCCTGAACATGCTGATTGGCGTGGGGAAGCAGGGCCTCTGCTGTTCCTTCTGCAAGTACACAGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000403963.5
ENST00000406247.7
ENST00000407950.5
ENST00000477401.5
CDS GCA 72 bp GTGCATGGGGTCTGCATCCATGGCTCCCCATCAATTTaGATTGGCAGAGACTTGCTCGTCCTGATGACCACG +
Preference number: 6 (lower is better)
Translates to: VHGVCIHGSPSI*IGRDLLVLMTT
Trigger: CGTGGTCATCAGGACGAGCAAGTCTCTGCCAATGCAAATTGATGGGGAGCCATGGATGCAGACCCCATGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000406247.7
ENST00000407950.5
ENST00000493142.1
CDS GCA 72 bp TCCCTCAGAGGCTATCGGCAGAAAGCCTTAGCTCCTTaGCATGCTGACTTTTCTGTGGAGCTGCTTGATCTC +
Preference number: 6 (lower is better)
Translates to: SLRGYRQKALAP*HADFSVELLDL
Trigger: GAGATCAAGCAGCTCCACAGAAAAGTCAGCATGGCAAGGAGCTAAGGCTTTCTGCCGATAGCCTCTGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493142.1
CDS TCA 72 bp CAGCATATTTCTGAAGTTGGGAAAATTCCGAAGGGCTaGGGTGGGCCCATTTTTCCTGGTTTGTCATGGTGG +
Preference number: 6 (lower is better)
Translates to: QHISEVGKIPKG*GGPIFPGLSWW
Trigger: CCACCATGACAAACCAGGAAAAATGGGCCCACCTCAGCCCTTCGGAATTTTCCCAACTTCAGAAATATGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000403963.5
ENST00000406247.7
ENST00000407950.5
ENST00000437998.1
ENST00000463981.2
ENST00000477401.5
CDS CCA 72 bp CAGGTAACAGACAATGTCCTTCAGATGGATTACTTCTaGGGAACACGTATTTGCAGGAGAAGTAGTCCGGGG +
Preference number: 6 (lower is better)
Translates to: QVTDNVLQMDYF*GTRICRRSSPG
Trigger: CCCCGGACTACTTCTCCTGCAAATACGTGTTCCCCAGAAGTAATCCATCTGAAGGACATTGTCTGTTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000403963.5
ENST00000406247.7
ENST00000407950.5
ENST00000464065.1
ENST00000471732.5
ENST00000477401.5
CDS CAA 90 bp AGTGAAACAACACAGGATTATTCCTTGCTTCGGTTTCTTGTCCTTTaGACGAGGGAGCAGAATAAACCGGTTTTTGGAGGCGGGCCCATC +
Preference number: 6 (lower is better)
Translates to: SETTQDYSLLRFLVL*TREQNKPVFGGGPI
Trigger: GATGGGCCCGCCTCCAAAAACCGGTTTATTCTGCTCCCTCGTCAAAAGGACAAGAAACCGAAGCAAGGAATAATCCTGTGTTGTTTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS CAA 90 bp CCTTCACGTTATTTTCTAAGCCCAGGAGCACAAGAAGTGGAATCGTaGTCATTCCTCCTTGAATCCATTCCTCCAGAGACACGGTTCCAT +
Preference number: 6 (lower is better)
Translates to: PSRYFLSPGAQEVES*SFLLESIPPETRFH
Trigger: ATGGAACCGTGTCTCTGGAGGAATGGATTCAAGGAGGAATGACAACGATTCCACTTCTTGTGCTCCTGGGCTTAGAAAATAACGTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000403963.5
ENST00000406247.7
ENST00000407950.5
ENST00000477401.5
CDS TCA 72 bp CACAGGATTATTCCTTGCTTCGGTTTCTTGTCCTTTTaGCGAGGGAGCAGAATAAACCGGTTTTTGGAGGCG +
Preference number: 6 (lower is better)
Translates to: HRIIPCFGFLSF*RGSRINRFLEA
Trigger: CGCCTCCAAAAACCGGTTTATTCTGCTCCCTCGTCAAAAGGACAAGAAACCGAAGCAAGGAATAATCCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS TCA 72 bp ACATCCCACTCAAGGTATTCTGCAACATGCATCATCTaGCTGATGATATTTTCTAGCTCCGAGCTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: TSHSRYSATCII*LMIFSSSELSR
Trigger: CCTGGACAGCTCGGAGCTAGAAAATATCATCAGTCAGATGATGCATGTTGCAGAATACCTTGAGTGGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000403963.5
ENST00000406247.7
ENST00000407950.5
ENST00000464065.1
ENST00000477401.5
CDS CAA 72 bp ACACAGGATTATTCCTTGCTTCGGTTTCTTGTCCTTTaGACGAGGGAGCAGAATAAACCGGTTTTTGGAGGC +
Preference number: 6 (lower is better)
Translates to: TQDYSLLRFLVL*TREQNKPVFGG
Trigger: GCCTCCAAAAACCGGTTTATTCTGCTCCCTCGTCAAAAGGACAAGAAACCGAAGCAAGGAATAATCCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000407950.5
CDS CAA 90 bp CTTCAGTCTCTCTTAGTCCTTGATTTATGTCAAGACGCGTTGATATaGGAAGTCTGTGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 6 (lower is better)
Translates to: LQSLLVLDLCQDALI*EVCAVCVCVCVCVC
Trigger: ACACACACACACACACACACACACACACACTGCACAGACTTCCAATATCAACGCGTCTTGACATAAATCAAGGACTAAGAGAGACTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403951.6
ENST00000463981.2
CDS GCA 72 bp TATCCTATATTCAGGAGGTCATATGCAGTCTTCAGCTaGACAGAGCTCCACTCCTTGACTTGCAAACTTCAA +
Preference number: 6 (lower is better)
Translates to: YPIFRRSYAVFS*TELHSLTCKLQ
Trigger: TTGAAGTTTGCAAGTCAAGGAGTGGAGCTCTGTGCAGCTGAAGACTGCATATGACCTCCTGAATATAGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403963.5
CDS CAA 72 bp TATTTTCTAAGCCCAGGAGCACAAGAAGTGGAATCGTaGTCATTCCTCCTTGAATCCATTCCTCCAGAGACA +
Preference number: 6 (lower is better)
Translates to: YFLSPGAQEVES*SFLLESIPPET
Trigger: TGTCTCTGGAGGAATGGATTCAAGGAGGAATGACAACGATTCCACTTCTTGTGCTCCTGGGCTTAGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000403963.5
ENST00000406247.7
ENST00000407950.5
ENST00000477401.5
CDS CAA 72 bp CTCTTAGTCCTTGATTTATGTCAAGACGCGTTGATATaGGAAGTCTGTGCAGTGTGTGTGTGTGTGTGTGTG +
Preference number: 6 (lower is better)
Translates to: LLVLDLCQDALI*EVCAVCVCVCV
Trigger: CACACACACACACACACACACTGCACAGACTTCCAATATCAACGCGTCTTGACATAAATCAAGGACTAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403951.6
ENST00000463981.2
CDS CAA 72 bp CAGTCTCTCTTAGTCCTTGATTTATGTCAAGACGCGTaGATATTGGAAGTCTGTGCAGTGTGTGTGTGTGTG +
Preference number: 6 (lower is better)
Translates to: QSLLVLDLCQDA*ILEVCAVCVCV
Trigger: CACACACACACACACTGCACAGACTTCCAATATCAACGCGTCTTGACATAAATCAAGGACTAAGAGAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403951.6
ENST00000463981.2
CDS GCA 72 bp GTCACATACCAGGTAAAAGATTCTTTATTCAGGTGTTaGGCAGAGGTCTATGCTTCAAAGATTCCACATGGC +
Preference number: 6 (lower is better)
Translates to: VTYQVKDSLFRC*AEVYASKIPHG
Trigger: GCCATGTGGAATCTTTGAAGCATAGACCTCTGCGCAACACCTGAATAAAGAATCTTTTACCTGGTATGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000403963.5
ENST00000407950.5
ENST00000437998.1
ENST00000463981.2
ENST00000477401.5
CDS CAA 90 bp GAGAAGCTCTGTCACATACCAGGTAAAAGATTCTTTATTCAGGTGTaGCGCAGAGGTCTATGCTTCAAAGATTCCACATGGCATGTTTCA +
Preference number: 6 (lower is better)
Translates to: EKLCHIPGKRFFIQV*RRGLCFKDSTWHVS
Trigger: TGAAACATGCCATGTGGAATCTTTGAAGCATAGACCTCTGCGCAACACCTGAATAAAGAATCTTTTACCTGGTATGTGACAGAGCTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000403963.5
ENST00000407950.5
ENST00000437998.1
ENST00000463981.2
ENST00000477401.5
CDS CAA 72 bp CCATCACATTCTATTTCTACAGATTCATGTAGCTTCTaGCAGGTGGCTGAGAAAGTTTCAGATGTGCCAAAC +
Preference number: 6 (lower is better)
Translates to: PSHSISTDSCSF*QVAEKVSDVPN
Trigger: GTTTGGCACATCTGAAACTTTCTCAGCCACCTGCAAGAAGCTACATGAATCTGTAGAAATAGAATGTGATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000403963.5
ENST00000406247.7
ENST00000407950.5
CDS CAA 90 bp CCTTGTCCATCTACAGTAACAGAGTTGGCTCTTTGCATTTTATTCTaGTCAATCACTTTGTTTGGCTGCTGGGAACCACTCTTTTCCTTT +
Preference number: 6 (lower is better)
Translates to: PCPSTVTELALCILF*SITLFGCWEPLFSF
Trigger: AAAGGAAAAGAGTGGTTCCCAGCAGCCAAACAAAGTGATTGACAAGAATAAAATGCAAAGAGCCAACTCTGTTACTGTAGATGGACAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399322.7
ENST00000402815.6
ENST00000403951.6
ENST00000403963.5
ENST00000406247.7
ENST00000407950.5
ENST00000471732.5
ENST00000477401.5
CDS GCA 72 bp ACCTTCAAAATCTATTGTCCCTTCAGGATTATACTTTaGAAGCACACCATTACCATGGAATTCTTCAAGAAC +
Preference number: 6 (lower is better)
Translates to: TFKIYCPFRIIL*KHTITMEFFKN
Trigger: GTTCTTGAAGAATTCCATGGTAATGGTGTGCTTGCAAAGTATAATCCTGAAGGGACAATAGATTTTGAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403963.5
ENST00000407950.5
CDS CAA 72 bp AACCTTCAAAATCTATTGTCCCTTCAGGATTATACTTaGCAAGCACACCATTACCATGGAATTCTTCAAGAA +
Preference number: 6 (lower is better)
Translates to: NLQNLLSLQDYT*QAHHYHGILQE
Trigger: TTCTTGAAGAATTCCATGGTAATGGTGTGCTTGCAAAGTATAATCCTGAAGGGACAATAGATTTTGAAGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403963.5
ENST00000407950.5
CDS CAA 72 bp GAAATTCCTTTTCATAGAGAGATATATACGACAAGATaGGGTATTTGGAAAGATACAGACACTGCTTGCAAC +
Preference number: 6 (lower is better)
Translates to: EIPFHREIYTTR*GIWKDTDTACN
Trigger: GTTGCAAGCAGTGTCTGTATCTTTCCAAATACCCAATCTTGTCGTATATATCTCTCTATGAAAAGGAATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403963.5