RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DGCR8 (Homo sapiens)

Ensembl gene IDs: ENSG00000128191

Ensembl transcript IDs: ENST00000351989.8, ENST00000383024.6, ENST00000407755.1, ENST00000457069.1, ENST00000475941.1, ENST00000485802.1, ENST00000491892.1, ENST00000495351.1, ENST00000495826.5, ENST00000498171.5

Found 809 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGCGTGGGTTGGAGGCCTGACACTGTGGTGCACGATGCATGACTaGTGGTCTCCTCAGAAGTGCGGCTGGCGGCCCCCGCGCCCTGGC +
Preference number: 1 (lower is better)
Translates to: GAWVGGLTLWCTMHD*WSPQKCGWRPPRPG
Trigger: GCCAGGGCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCACCACAGTGTCAGGCCTCCAACCCACGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR TCA 90 bp GGAAGGAGCGTGGGTTGGAGGCCTGACACTGTGGTGCACGATGCATaGCTGCTGGTCTCCTCAGAAGTGCGGCTGGCGGCCCCCGCGCCC +
Preference number: 1 (lower is better)
Translates to: GRSVGWRPDTVVHDA*LLVSSEVRLAAPAP
Trigger: GGGCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCACCACAGTGTCAGGCCTCCAACCCACGCTCCTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 90 bp GGTCCCTGTAGCAGCCCTGCAGGCGCCCTGGGCACATGGGCCACCTaGCATCACGGGCCAGCCACAGGACTCAGCCATCCCCTCTCATCT +
Preference number: 1 (lower is better)
Translates to: GPCSSPAGALGTWAT*HHGPATGLSHPLSS
Trigger: AGATGAGAGGGGATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGGGCGCCTGCAGGGCTGCTACAGGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR GCA 90 bp GTTGGCCACAGGGAAGGAGCGTGGGTTGGAGGCCTGACACTGTGGTaGACGATGCATGACTGCTGGTCTCCTCAGAAGTGCGGCTGGCGG +
Preference number: 1 (lower is better)
Translates to: VGHREGAWVGGLTLW*TMHDCWSPQKCGWR
Trigger: CCGCCAGCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCACCACAGTGTCAGGCCTCCAACCCACGCTCCTTCCCTGTGGCCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR GCA 90 bp CAGGTGCCAGTCCACCACCAGGGCCAGCCTTTGAGCACACCCTGGTaGCTCAGACTCCGGCAGGAACACATTTCCATCGCACACCCACCC +
Preference number: 1 (lower is better)
Translates to: QVPVHHQGQPLSTPW*LRLRQEHISIAHPP
Trigger: GGGTGGGTGTGCGATGGAAATGTGTTCCTGCCGGAGTCTGAGGCACCAGGGTGTGCTCAAAGGCTGGCCCTGGTGGTGGACTGGCACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR TCA 90 bp CGGGCCCACAGGTTGGCCACAGGGAAGGAGCGTGGGTTGGAGGCCTaGCACTGTGGTGCACGATGCATGACTGCTGGTCTCCTCAGAAGT +
Preference number: 1 (lower is better)
Translates to: RAHRLATGKERGLEA*HCGARCMTAGLLRS
Trigger: ACTTCTGAGGAGACCAGCAGTCATGCATCGTGCACCACAGTGTCAGGCCTCCAACCCACGCTCCTTCCCTGTGGCCAACCTGTGGGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR TCA 90 bp GGTCCACCACTGTCCACAGTCACCAGCTGCCACTGGTGCAGTCGCTaGGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAGAGCCGCTG +
Preference number: 1 (lower is better)
Translates to: GPPLSTVTSCHWCSR*VHPFRPGAFQGEPL
Trigger: CAGCGGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAGCTGGTGACTGTGGACAGTGGTGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR TCA 90 bp CACGGCACTCTGCACAGGTGCCAGTCCACCACCAGGGCCAGCCTTTaGGCACACCCTGGTGCCTCAGACTCCGGCAGGAACACATTTCCA +
Preference number: 1 (lower is better)
Translates to: HGTLHRCQSTTRASL*AHPGASDSGRNTFP
Trigger: TGGAAATGTGTTCCTGCCGGAGTCTGAGGCACCAGGGTGTGCTCAAAGGCTGGCCCTGGTGGTGGACTGGCACCTGTGCAGAGTGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR GCA 90 bp GCTGGACTCTTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTaGACAGGTGCCAGTCCACCACCAGGGCCAGCCTTTGAGCACACC +
Preference number: 1 (lower is better)
Translates to: AGLLLQMAHHKHTAL*TGASPPPGPAFEHT
Trigger: GGTGTGCTCAAAGGCTGGCCCTGGTGGTGGACTGGCACCTGTGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR GCA 90 bp GTAGGGGGCATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTTaGTTCAGATGGCGCACCACAAGCACACGGCACTCTGCACAGGTG +
Preference number: 1 (lower is better)
Translates to: VGGMVGDRHGRTLDS*FRWRTTSTRHSAQV
Trigger: CACCTGTGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCATGCCCCCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 90 bp CAGGTTGGCCACAGGGAAGGAGCGTGGGTTGGAGGCCTGACACTGTaGTGCACGATGCATGACTGCTGGTCTCCTCAGAAGTGCGGCTGG +
Preference number: 1 (lower is better)
Translates to: QVGHREGAWVGGLTL*CTMHDCWSPQKCGW
Trigger: CCAGCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCACCACAGTGTCAGGCCTCCAACCCACGCTCCTTCCCTGTGGCCAACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 90 bp GCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATaGCTGTCCCTGTACACTAAAGCCTCCACCCTAAGGCCGGGCCCA +
Preference number: 1 (lower is better)
Translates to: AFQGEPLLHMCAVWP*LSLYTKASTLRPGP
Trigger: TGGGCCCGGCCTTAGGGTGGAGGCTTTAGTGTACAGGGACAGCCATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 90 bp GCACAGGTGCCAGTCCACCACCAGGGCCAGCCTTTGAGCACACCCTaGTGCCTCAGACTCCGGCAGGAACACATTTCCATCGCACACCCA +
Preference number: 1 (lower is better)
Translates to: AQVPVHHQGQPLSTP*CLRLRQEHISIAHP
Trigger: TGGGTGTGCGATGGAAATGTGTTCCTGCCGGAGTCTGAGGCACCAGGGTGTGCTCAAAGGCTGGCCCTGGTGGTGGACTGGCACCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 90 bp CCTGGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTaGCCATGGCTGTCCCTGTACACTAAAGCCTCCACCCTAAGGCCG +
Preference number: 1 (lower is better)
Translates to: PGAFQGEPLLHMCAV*PWLSLYTKASTLRP
Trigger: CGGCCTTAGGGTGGAGGCTTTAGTGTACAGGGACAGCCATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 90 bp CACCAGCTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTaGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTG +
Preference number: 1 (lower is better)
Translates to: HQLPLVQSLSPSIQA*SFPGRAAAPHVCCV
Trigger: CACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAGCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 90 bp ATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTTGCTTCAGATaGCGCACCACAAGCACACGGCACTCTGCACAGGTGCCAGTCCAC +
Preference number: 1 (lower is better)
Translates to: MVGDRHGRTLDSCFR*RTTSTRHSAQVPVH
Trigger: GTGGACTGGCACCTGTGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR GCA 90 bp GCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAGAGCCGCTaGTCCACATGTGTGCTGTGTGGCCATGGCTGTCCCTGTACACTA +
Preference number: 1 (lower is better)
Translates to: AESIHSGLELSRESR*STCVLCGHGCPCTL
Trigger: TAGTGTACAGGGACAGCCATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 90 bp TCATCAGAAAAAGGGACCCTAGGAGGCCAGGGTAACTCCAGGAGGTaGCAGGACGTCATCCTTGCTGGCATCGTGTCCAGACTGGAGAGG +
Preference number: 1 (lower is better)
Translates to: SSEKGTLGGQGNSRR*QDVILAGIVSRLER
Trigger: CCTCTCCAGTCTGGACACGATGCCAGCAAGGATGACGTCCTGCCACCTCCTGGAGTTACCCTGGCCTCCTAGGGTCCCTTTTTCTGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR GCA 90 bp ACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTaGACGAAGCTTTGGTTCACAGGCGCATCTGGCTGGCTAAGGGCA +
Preference number: 1 (lower is better)
Translates to: TARHSEAPQPLGEHM*TKLWFTGASGWLRA
Trigger: TGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 90 bp AGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTaGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGTC +
Preference number: 1 (lower is better)
Translates to: SEAPQPLGEHMCTKL*FTGASGWLRATVTV
Trigger: GACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR TCA 90 bp CGTCATCCTTGCTGGCATCGTGTCCAGACTGGAGAGGGACCACCTTaGTGGTTTGCCTCCAATCCCAGAAAGCTAGTTCTGATGCTAAAA +
Preference number: 1 (lower is better)
Translates to: RHPCWHRVQTGEGPP*WFASNPRKLVLMLK
Trigger: TTTTAGCATCAGAACTAGCTTTCTGGGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAGCAAGGATGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR TCA 90 bp TTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGTCAAATaGCTATTCACAGCTGCAGACAGGAGGCAAGACAGAAGCAAGTGT +
Preference number: 1 (lower is better)
Translates to: FTGASGWLRATVTVK*LFTAADRRQDRSKC
Trigger: ACACTTGCTTCTGTCTTGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 90 bp CATCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATaGGCTACACTGAAGGCCCTTGCTTCCTGTTTCAACAAGTCCACT +
Preference number: 1 (lower is better)
Translates to: HPEKPLSQATALDQE*ATLKALASCFNKST
Trigger: AGTGGACTTGTTGAAACAGGAAGCAAGGGCCTTCAGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 90 bp TTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAGGCGCATCTaGCTGGCTAAGGGCAACAGTCACAGTCAAATGACTATTCACAGC +
Preference number: 1 (lower is better)
Translates to: FRGTHVHEALVHRRI*LAKGNSHSQMTIHS
Trigger: GCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR TCA 90 bp AACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTaGAGGCCCTTGCTTCCTGTTTCAACAAGTCCACTTGCTAAAATG +
Preference number: 1 (lower is better)
Translates to: NRCHRQQLWIKNGLH*RPLLPVSTSPLAKM
Trigger: CATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGGGCCTTCAGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR GCA 90 bp TTGCTGGCATCGTGTCCAGACTGGAGAGGGACCACCTTGATGGTTTaGCTCCAATCCCAGAAAGCTAGTTCTGATGCTAAAATTCTGTTT +
Preference number: 1 (lower is better)
Translates to: LLASCPDWRGTTLMV*LQSQKASSDAKILF
Trigger: AAACAGAATTTTAGCATCAGAACTAGCTTTCTGGGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR GCA 90 bp GCGTATTACATACTAAAATTCATGAAAGCCTTCATAAAAAGAGCCTaGAGCAGGTGCACAGAAGCAGGGTCCACCACTGTCCACAGTCAC +
Preference number: 1 (lower is better)
Translates to: AYYILKFMKAFIKRA*SRCTEAGSTTVHSH
Trigger: GTGACTGTGGACAGTGGTGGACCCTGCTTCTGTGCACCTGCTGCAGGCTCTTTTTATGAAGGCTTTCATGAATTTTAGTATGTAATACGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR GCA 90 bp ACTGAAGGCCCTTGCTTCCTGTTTCAACAAGTCCACTTGCTAAAATaGATGATTCCAAATCTACCTTCTACTCTCACTGTGAAAGTCTTT +
Preference number: 1 (lower is better)
Translates to: TEGPCFLFQQVHLLK*MIPNLPSTLTVKVF
Trigger: AAAGACTTTCACAGTGAGAGTAGAAGGTAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGGGCCTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp CCTGCTGTGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTGCCCTGCAGGCGCCCTaGGCACATGGGCCACCTGGC +
Preference number: 2 (lower is better)
Translates to: PAVVVPGNSKTQRGSPTFALQAP*AHGPPG
Trigger: GCCAGGTGGCCCATGTGCCCAGGGCGCCTGCAGGGC...AAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp GCCCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATCACAGGGAAGGAGCGTaGGTTGGAGGCCTGACACTG +
Preference number: 2 (lower is better)
Translates to: ALGTWATWHHGPATGLSHHREGA*VGGLTL
Trigger: CAGTGTCAGGCCTCCAACCCACGCTCCTTCCCTGTG...ATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp TGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAATGGTCTCCTCAGAAGTaGGGCTGGCGGCCCCCGCGC +
Preference number: 2 (lower is better)
Translates to: WWCLGTARHSEAPQPLGEWSPQK*GWRPPR
Trigger: GCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCA...TTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp CCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATCCTCCAGGGAGAGCCGCTaGTCCACATGTGTGCTGTGT +
Preference number: 2 (lower is better)
Translates to: PGHMGHLASRASHRTQPSSRESR*STCVLC
Trigger: ACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGA...GGATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp GTAGGGGGCATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTTGCTTCAGAGCCGGGCCCACAGGTTaGCCACAGGGAAGGAGCGTG +
Preference number: 2 (lower is better)
Translates to: VGGMVGDRHGRTLDSCFRAGPTG*PQGRSV
Trigger: CACGCTCCTTCCCTGTGGCCAACCTGTGGGCCCGGC...TCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCATGCCCCCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR TCA 90 bp GCCCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATGTGGTGCACGATGCATaGCTGCTGGTCTCCTCAGAA +
Preference number: 2 (lower is better)
Translates to: ALGTWATWHHGPATGLSHVVHDA*LLVSSE
Trigger: TTCTGAGGAGACCAGCAGTCATGCATCGTGCACCAC...ATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp CTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCTGGTCTCCTCAGAAGTaGGGCTGGCGGCCCCCGCGC +
Preference number: 2 (lower is better)
Translates to: LGTARHSEAPQPLGEHMCWSPQK*GWRPPR
Trigger: GCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCA...GCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp TGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAAGCCGGGCCCACAGGTTaGCCACAGGGAAGGAGCGTG +
Preference number: 2 (lower is better)
Translates to: WWCLGTARHSEAPQPLGEAGPTG*PQGRSV
Trigger: CACGCTCCTTCCCTGTGGCCAACCTGTGGGCCCGGC...TTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGGGCACATGGGCCACCTaGCATCACGGGCCAGCCACA +
Preference number: 2 (lower is better)
Translates to: PEARKGREGLSVQRGAFRGTWAT*HHGPAT
Trigger: TGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCC...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp CTGGCATCGTGTCCAGACTGGAGAGGGACCACCTTGATGGTTTGCCTCCAATCCGGCGCCCTGGGCACATaGGCCACCTGGCATCACGGG +
Preference number: 2 (lower is better)
Translates to: LASCPDWRGTTLMVCLQSGALGT*ATWHHG
Trigger: CCCGTGATGCCAGGTGGCCCATGTGCCCAGGGCGCC...GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR TCA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGCGTGGGTTGGAGGCCTaGCACTGTGGTGCACGATGC +
Preference number: 2 (lower is better)
Translates to: PEARKGREGLSVQRGAFRRGLEA*HCGARC
Trigger: GCATCGTGCACCACAGTGTCAGGCCTCCAACCCACG...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR TCA 90 bp ATCGCACACCCACCCATAGGGGCCACCAGTCGAGAAGCAAGCTGGGCACCAGGCGGAGAGGGACCACCTTaGTGGTTTGCCTCCAATCCC +
Preference number: 2 (lower is better)
Translates to: IAHPPIGATSREASWAPGGEGPP*WFASNP
Trigger: GGGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCC...GCCTGGTGCCCAGCTTGCTTCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CAA 90 bp TGTAGGGGGCATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTaGCTTCAGATGGCGCACCACAAGCACACGGCACTCTGCACAGGT +
Preference number: 2 (lower is better)
Translates to: CRGHGGGQTRQNAGL*LQMAHHKHTALCTG
Trigger: ACCTGTGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCATGCCCCCTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR TCA 90 bp TGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACGTGGGTTGGAGGCCTaGCACTGTGGTGCACGATGC +
Preference number: 2 (lower is better)
Translates to: WWCLGTARHSEAPQPLGERGLEA*HCGARC
Trigger: GCATCGTGCACCACAGTGTCAGGCCTCCAACCCACG...TTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR TCA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGACCATGTGCACCTCCTaGCCAGGTCCCTGTAGCAGC +
Preference number: 2 (lower is better)
Translates to: PEARKGREGLSVQRGAFRTMCTS*PGPCSS
Trigger: GCTGCTACAGGGACCTGGTCAGGAGGTGCACATGGT...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR TCA 90 bp CCGGCAGGAACACATTTCCATCGCACACCCACCCATAGGGGCCACCAGTCGAGAACCATGTGCACCTCCTaGCCAGGTCCCTGTAGCAGC +
Preference number: 2 (lower is better)
Translates to: PAGTHFHRTPTHRGHQSRTMCTS*PGPCSS
Trigger: GCTGCTACAGGGACCTGGTCAGGAGGTGCACATGGT...TCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGATGGAAATGTGTTCCTGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp ATCGCACACCCACCCATAGGGGCCACCAGTCGAGAAGCAAGCTGGGCACCAGGCGCAGGACGTCATCCTTaGTGGCATCGTGTCCAGACT +
Preference number: 2 (lower is better)
Translates to: IAHPPIGATSREASWAPGAGRHP*WHRVQT
Trigger: AGTCTGGACACGATGCCAGCAAGGATGACGTCCTGC...GCCTGGTGCCCAGCTTGCTTCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp GGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATGGAGGCCTGACACTGTaGTGCACGATGCATGACTGC +
Preference number: 2 (lower is better)
Translates to: GLELSRESRCSTCVLCGHGGLTL*CTMHDC
Trigger: GCAGTCATGCATCGTGCACCACAGTGTCAGGCCTCC...ATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR TCA 90 bp GGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATGTGGTGCACGATGCATaGCTGCTGGTCTCCTCAGAA +
Preference number: 2 (lower is better)
Translates to: GLELSRESRCSTCVLCGHVVHDA*LLVSSE
Trigger: TTCTGAGGAGACCAGCAGTCATGCATCGTGCACCAC...ATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp ATCGCACACCCACCCATAGGGGCCACCAGTCGAGAAGCAAGCTGGGCACCAGGCTGCACGATGCATGACTaGTGGTCTCCTCAGAAGTGC +
Preference number: 2 (lower is better)
Translates to: IAHPPIGATSREASWAPGCTMHD*WSPQKC
Trigger: GCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCA...GCCTGGTGCCCAGCTTGCTTCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp GTAGGGGGCATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTTGCTTCAGAGCTGCTCCACATGTGTaGTGTGTGGCCATGGCTGTC +
Preference number: 2 (lower is better)
Translates to: VGGMVGDRHGRTLDSCFRAAPHV*CVAMAV
Trigger: GACAGCCATGGCCACACAGCACACATGTGGAGCAGC...TCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCATGCCCCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp GTAGGGGGCATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTTGCTTCAGATTGAGCACACCCTGGTaGCTCAGACTCCGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: VGGMVGDRHGRTLDSCFRLSTPW*LRLRQE
Trigger: TTCCTGCCGGAGTCTGAGGCACCAGGGTGTGCTCAA...TCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCATGCCCCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp CCTGCTGTGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTTTGAGCACACCCTGGTaGCTCAGACTCCGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: PAVVVPGNSKTQRGSPTFLSTPW*LRLRQE
Trigger: TTCCTGCCGGAGTCTGAGGCACCAGGGTGTGCTCAA...AAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp GAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAGGCGGCACTCTGCACAGGTaGCAGTCCACCACCAGGGCC +
Preference number: 2 (lower is better)
Translates to: EAPQPLGEHMCTKLWFTGGTLHR*QSTTRA
Trigger: GGCCCTGGTGGTGGACTGGCACCTGTGCAGAGTGCC...GCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp GGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATGGCTGACGATGCATGACTGCTaGTCTCCTCAGAAGTGCGGC +
Preference number: 2 (lower is better)
Translates to: GAFQGEPLLHMCAVWPWLTMHDC*SPQKCG
Trigger: GCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGT...CAGCCATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp CTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGGGAGGCCTGACACTGTaGTGCACGATGCATGACTGC +
Preference number: 2 (lower is better)
Translates to: LPLVQSLSPSIQAWSFPGGGLTL*CTMHDC
Trigger: GCAGTCATGCATCGTGCACCACAGTGTCAGGCCTCC...CCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp GTAGGGGGCATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTTGCTTCAGACCATCCATTCAGGCCTaGAGCTTTCCAGGGAGAGCC +
Preference number: 2 (lower is better)
Translates to: VGGMVGDRHGRTLDSCFRPSIQA*SFPGRA
Trigger: GGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGG...TCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCATGCCCCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp TTGGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGTCAAATGACTGGCGCCCTGGGCACATaGGCCACCTGGCATCACGGG +
Preference number: 2 (lower is better)
Translates to: LVHRRIWLAKGNSHSQMTGALGT*ATWHHG
Trigger: CCCGTGATGCCAGGTGGCCCATGTGCCCAGGGCGCC...AGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CAA 90 bp AGGGGCCACCAGTCGAGAAGCAAGCTGGGCACCAGGCAGCTGCCTTaGACATCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCA +
Preference number: 2 (lower is better)
Translates to: RGHQSRSKLGTRQLP*TSRETAVTGNSSGS
Trigger: TGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGATGTCAAAGGCAGCTGCCTGGTGCCCAGCTTGCTTCTCGACTGGTGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR TCA 90 bp CCGGCAGGAACACATTTCCATCGCACACCCACCCATAGGGGCCACCAGTCGAGAGTGGTGCACGATGCATaGCTGCTGGTCTCCTCAGAA +
Preference number: 2 (lower is better)
Translates to: PAGTHFHRTPTHRGHQSRVVHDA*LLVSSE
Trigger: TTCTGAGGAGACCAGCAGTCATGCATCGTGCACCAC...TCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGATGGAAATGTGTTCCTGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR TCA 90 bp CTGGCATCGTGTCCAGACTGGAGAGGGACCACCTTGATGGTTTGCCTCCAATCCACCATGTGCACCTCCTaGCCAGGTCCCTGTAGCAGC +
Preference number: 2 (lower is better)
Translates to: LASCPDWRGTTLMVCLQSTMCTS*PGPCSS
Trigger: GCTGCTACAGGGACCTGGTCAGGAGGTGCACATGGT...GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp CCTGCTGTGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTGCATCGTGTCCAGACTaGAGAGGGACCACCTTGATG +
Preference number: 2 (lower is better)
Translates to: PAVVVPGNSKTQRGSPTFASCPD*RGTTLM
Trigger: CATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGC...AAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp ATCGCACACCCACCCATAGGGGCCACCAGTCGAGAAGCAAGCTGGGCACCAGGCCACAGGCAACAGCTCTaGATCAAGAATGGGCTACAC +
Preference number: 2 (lower is better)
Translates to: IAHPPIGATSREASWAPGHRQQL*IKNGLH
Trigger: GTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTG...GCCTGGTGCCCAGCTTGCTTCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp CTGGCATCGTGTCCAGACTGGAGAGGGACCACCTTGATGGTTTGCCTCCAATCCGCTGCTCCACATGTGTaGTGTGTGGCCATGGCTGTC +
Preference number: 2 (lower is better)
Translates to: LASCPDWRGTTLMVCLQSAAPHV*CVAMAV
Trigger: GACAGCCATGGCCACACAGCACACATGTGGAGCAGC...GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp AGAACGCTGGACTCTTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTGCAGCTGCTCCACATGTGTaGTGTGTGGCCATGGCTGTC +
Preference number: 2 (lower is better)
Translates to: RTLDSCFRWRTTSTRHSAAAPHV*CVAMAV
Trigger: GACAGCCATGGCCACACAGCACACATGTGGAGCAGC...TGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp GACAGTTTGCTTTATGTGTTCAGACAATCAAGGCTCGCCTTCCAGGCACAGCCCGGCACTCTGCACAGGTaGCAGTCCACCACCAGGGCC +
Preference number: 2 (lower is better)
Translates to: DSLLYVFRQSRLAFQAQPGTLHR*QSTTRA
Trigger: GGCCCTGGTGGTGGACTGGCACCTGTGCAGAGTGCC...GGGCTGTGCCTGGAAGGCGAGCCTTGATTGTCTGAACACATAAAGCAAACTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp AGAACGCTGGACTCTTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTGCAGGAGGCCTGACACTGTaGTGCACGATGCATGACTGC +
Preference number: 2 (lower is better)
Translates to: RTLDSCFRWRTTSTRHSAGGLTL*CTMHDC
Trigger: GCAGTCATGCATCGTGCACCACAGTGTCAGGCCTCC...TGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp CTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCGGGAAGGATATGTTGTaGGCGGCCCACAGGCCAACA +
Preference number: 2 (lower is better)
Translates to: LGTARHSEAPQPLGEHMCGKDML*AAHRPT
Trigger: TGTTGGCCTGTGGGCCGCCCACAACATATCCTTCCC...GCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CAA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTaGGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGT +
Preference number: 2 (lower is better)
Translates to: QRGSPTFRGTHVHEA*VHRRIWLAKGNSHS
Trigger: ACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR TCA 90 bp GACAGTTTGCTTTATGTGTTCAGACAATCAAGGCTCGCCTTCCAGGCACAGCCCACCAGGGCCAGCCTTTaGGCACACCCTGGTGCCTCA +
Preference number: 2 (lower is better)
Translates to: DSLLYVFRQSRLAFQAQPTRASL*AHPGAS
Trigger: TGAGGCACCAGGGTGTGCTCAAAGGCTGGCCCTGGT...GGGCTGTGCCTGGAAGGCGAGCCTTGATTGTCTGAACACATAAAGCAAACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp GAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAGGCTTGAGCACACCCTGGTaGCTCAGACTCCGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: EAPQPLGEHMCTKLWFTGLSTPW*LRLRQE
Trigger: TTCCTGCCGGAGTCTGAGGCACCAGGGTGTGCTCAA...GCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp TGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAAAGAACGCTGGACTCTTaGTTCAGATGGCGCACCACA +
Preference number: 2 (lower is better)
Translates to: WWCLGTARHSEAPQPLGERTLDS*FRWRTT
Trigger: TGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT...TTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACCCATCCATTCAGGCCTaGAGCTTTCCAGGGAGAGCC +
Preference number: 2 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHPSIQA*SFPGRA
Trigger: GGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGG...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp CTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCGCATCGTGTCCAGACTaGAGAGGGACCACCTTGATG +
Preference number: 2 (lower is better)
Translates to: LGTARHSEAPQPLGEHMCASCPD*RGTTLM
Trigger: CATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGC...GCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp GAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAGGCAGTCGAGAAGCAAGCTaGGCACCAGGCAGCTGCCTT +
Preference number: 2 (lower is better)
Translates to: EAPQPLGEHMCTKLWFTGSREAS*APGSCL
Trigger: AAGGCAGCTGCCTGGTGCCCAGCTTGCTTCTCGACT...GCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp TCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTGGAAGGAGCGTGGGTTaGAGGCCTGACACTGTGGTG +
Preference number: 2 (lower is better)
Translates to: SRETAVTGNSSGSRMGYTGRSVG*RPDTVV
Trigger: CACCACAGTGTCAGGCCTCCAACCCACGCTCCTTCC...AGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp GAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAGGCGGACGTCATCCTTGCTaGCATCGTGTCCAGACTGGA +
Preference number: 2 (lower is better)
Translates to: EAPQPLGEHMCTKLWFTGGRHPC*HRVQTG
Trigger: TCCAGTCTGGACACGATGCCAGCAAGGATGACGTCC...GCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp GAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAGGCGACACGGCAGAACGCTaGACTCTTGCTTCAGATGGC +
Preference number: 2 (lower is better)
Translates to: EAPQPLGEHMCTKLWFTGDTAER*TLASDG
Trigger: GCCATCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTC...GCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR TCA 90 bp TTGGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGTCAAATGACTCACTGGTGCAGTCGCTaGGTCCATCCATTCAGGCCT +
Preference number: 2 (lower is better)
Translates to: LVHRRIWLAKGNSHSQMTHWCSR*VHPFRP
Trigger: AGGCCTGAATGGATGGACTCAGCGACTGCACCAGTG...AGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp AGGCAGCTGCCTTTGACATCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATGCACGATGCATGACTaGTGGTCTCCTCAGAAGTGC +
Preference number: 2 (lower is better)
Translates to: RQLPLTSRETAVTGNSSGCTMHD*WSPQKC
Trigger: GCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCA...TCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGATGTCAAAGGCAGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp GCTAAGGGCAACAGTCACAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCACACAGGGAAGGAGCGTaGGTTGGAGGCCTGACACTG +
Preference number: 2 (lower is better)
Translates to: AKGNSHSQMTIHSCRQEAHREGA*VGGLTL
Trigger: CAGTGTCAGGCCTCCAACCCACGCTCCTTCCCTGTG...TGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp CTGGCATCGTGTCCAGACTGGAGAGGGACCACCTTGATGGTTTGCCTCCAATCCTGTGCTGTGTGGCCATaGCTGTCCCTGTACACTAAA +
Preference number: 2 (lower is better)
Translates to: LASCPDWRGTTLMVCLQSCAVWP*LSLYTK
Trigger: TTTAGTGTACAGGGACAGCCATGGCCACACAGCACA...GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp CTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCGCTCTGGATCAAGAATaGGCTACACTGAAGGCCCTT +
Preference number: 2 (lower is better)
Translates to: LGTARHSEAPQPLGEHMCALDQE*ATLKAL
Trigger: AAGGGCCTTCAGTGTAGCCCATTCTTGATCCAGAGC...GCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp AGAACGCTGGACTCTTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTGCACACAGGCAACAGCTCTaGATCAAGAATGGGCTACAC +
Preference number: 2 (lower is better)
Translates to: RTLDSCFRWRTTSTRHSAHRQQL*IKNGLH
Trigger: GTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTG...TGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR TCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAAGAATGGGCTACACTaGAGGCCCTTGCTTCCTGTT +
Preference number: 2 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHKNGLH*RPLLPV
Trigger: AACAGGAAGCAAGGGCCTTCAGTGTAGCCCATTCTT...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp TCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTCACTGTGGTGCACGATaGATGACTGCTGGTCTCCTC +
Preference number: 2 (lower is better)
Translates to: SRETAVTGNSSGSRMGYTHCGAR*MTAGLL
Trigger: GAGGAGACCAGCAGTCATGCATCGTGCACCACAGTG...AGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp GCTAAGGGCAACAGTCACAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCATCCAGGGAGAGCCGCTaGTCCACATGTGTGCTGTGT +
Preference number: 2 (lower is better)
Translates to: AKGNSHSQMTIHSCRQEASRESR*STCVLC
Trigger: ACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGA...TGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp CCTTGCTTCCTGTTTCAACAAGTCCACTTGCTAAAATGCATGATTCCAAATCTAGCCCTGCAGGCGCCCTaGGCACATGGGCCACCTGGC +
Preference number: 2 (lower is better)
Translates to: PCFLFQQVHLLKCMIPNLALQAP*AHGPPG
Trigger: GCCAGGTGGCCCATGTGCCCAGGGCGCCTGCAGGGC...TAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp TCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTGCATCGTGTCCAGACTaGAGAGGGACCACCTTGATG +
Preference number: 2 (lower is better)
Translates to: SRETAVTGNSSGSRMGYTASCPD*RGTTLM
Trigger: CATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGC...AGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp GACAGTTTGCTTTATGTGTTCAGACAATCAAGGCTCGCCTTCCAGGCACAGCCCGGTAACTCCAGGAGGTaGCAGGACGTCATCCTTGCT +
Preference number: 2 (lower is better)
Translates to: DSLLYVFRQSRLAFQAQPGNSRR*QDVILA
Trigger: AGCAAGGATGACGTCCTGCCACCTCCTGGAGTTACC...GGGCTGTGCCTGGAAGGCGAGCCTTGATTGTCTGAACACATAAAGCAAACTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp CCTTGCTTCCTGTTTCAACAAGTCCACTTGCTAAAATGCATGATTCCAAATCTAGGCGCCCTGGGCACATaGGCCACCTGGCATCACGGG +
Preference number: 2 (lower is better)
Translates to: PCFLFQQVHLLKCMIPNLGALGT*ATWHHG
Trigger: CCCGTGATGCCAGGTGGCCCATGTGCCCAGGGCGCC...TAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp CTTGCTAAAATGCATGATTCCAAATCTACCTTCTACTCTCACTGTGAAAGTCTTGCCCTGCAGGCGCCCTaGGCACATGGGCCACCTGGC +
Preference number: 2 (lower is better)
Translates to: LAKMHDSKSTFYSHCESLALQAP*AHGPPG
Trigger: GCCAGGTGGCCCATGTGCCCAGGGCGCCTGCAGGGC...AAGACTTTCACAGTGAGAGTAGAAGGTAGATTTGGAATCATGCATTTTAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CAA 90 bp ACGTCATCCTTGCTGGCATCGTGTCCAGACTGGAGAGGGACCACCTaGATGGTTTGCCTCCAATCCCAGAAAGCTAGTTCTGATGCTAAA +
Preference number: 2 (lower is better)
Translates to: TSSLLASCPDWRGTT*MVCLQSQKASSDAK
Trigger: TTTAGCATCAGAACTAGCTTTCTGGGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAGCAAGGATGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp CTTGCTAAAATGCATGATTCCAAATCTACCTTCTACTCTCACTGTGAAAGTCTTTGGTCTCCTCAGAAGTaGGGCTGGCGGCCCCCGCGC +
Preference number: 2 (lower is better)
Translates to: LAKMHDSKSTFYSHCESLWSPQK*GWRPPR
Trigger: GCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCA...AAGACTTTCACAGTGAGAGTAGAAGGTAGATTTGGAATCATGCATTTTAGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACTTCATAAAAAGAGCCTaGAGCAGGTGCACAGAAGCA +
Preference number: 2 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHFIKRA*SRCTEA
Trigger: TGCTTCTGTGCACCTGCTGCAGGCTCTTTTTATGAA...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp CCGGCAGGAACACATTTCCATCGCACACCCACCCATAGGGGCCACCAGTCGAGAAGCTTTAAAAATCAATaGGTGGACATATGGACTCGA +
Preference number: 2 (lower is better)
Translates to: PAGTHFHRTPTHRGHQSRSFKNQ*VDIWTR
Trigger: TCGAGTCCATATGTCCACCCATTGATTTTTAAAGCT...TCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGATGGAAATGTGTTCCTGCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp CCTGCTGTGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGCTTTAAAAATCAATaGGTGGACATATGGACTCGA +
Preference number: 2 (lower is better)
Translates to: PAVVVPGNSKTQRGSPTFSFKNQ*VDIWTR
Trigger: TCGAGTCCATATGTCCACCCATTGATTTTTAAAGCT...AAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp TTGGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGTCAAATGACTCACAGGCAACAGCTCTaGATCAAGAATGGGCTACAC +
Preference number: 2 (lower is better)
Translates to: LVHRRIWLAKGNSHSQMTHRQQL*IKNGLH
Trigger: GTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTG...AGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp CAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCAAGACAGAAGCAAGTGTCAGAACGCTGGACTCTTaGTTCAGATGGCGCACCACA +
Preference number: 2 (lower is better)
Translates to: QSNDYSQLQTGGKTEASVRTLDS*FRWRTT
Trigger: TGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT...GACACTTGCTTCTGTCTTGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR TCA 90 bp GACAGTTTGCTTTATGTGTTCAGACAATCAAGGCTCGCCTTCCAGGCACAGCCCACAGTCACAGTCAAATaGCTATTCACAGCTGCAGAC +
Preference number: 2 (lower is better)
Translates to: DSLLYVFRQSRLAFQAQPTVTVK*LFTAAD
Trigger: GTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGT...GGGCTGTGCCTGGAAGGCGAGCCTTGATTGTCTGAACACATAAAGCAAACTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp AATATCACAAAAGCTTTAAAAATCAATGGGTGGACATATGGACTCGACTGCAAAGCCGGGCCCACAGGTTaGCCACAGGGAAGGAGCGTG +
Preference number: 2 (lower is better)
Translates to: NITKALKINGWTYGLDCKAGPTG*PQGRSV
Trigger: CACGCTCCTTCCCTGTGGCCAACCTGTGGGCCCGGC...TTTGCAGTCGAGTCCATATGTCCACCCATTGATTTTTAAAGCTTTTGTGATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR TCA 90 bp CTCTCATCTGTCATCCAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAACACTGGTGCAGTCGCTaGGTCCATCCATTCAGGCCT +
Preference number: 2 (lower is better)
Translates to: LSSVIQASCVVSAYYILKHWCSR*VHPFRP
Trigger: AGGCCTGAATGGATGGACTCAGCGACTGCACCAGTG...TTTTAGTATGTAATACGCACTGACGACACATGATGCTTGGATGACAGATGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp CTCTCATCTGTCATCCAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAATCCAGGGAGAGCCGCTaGTCCACATGTGTGCTGTGT +
Preference number: 2 (lower is better)
Translates to: LSSVIQASCVVSAYYILKSRESR*STCVLC
Trigger: ACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGA...TTTTAGTATGTAATACGCACTGACGACACATGATGCTTGGATGACAGATGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp GCTAAGGGCAACAGTCACAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCATTCATAAAAAGAGCCTaGAGCAGGTGCACAGAAGCA +
Preference number: 2 (lower is better)
Translates to: AKGNSHSQMTIHSCRQEAFIKRA*SRCTEA
Trigger: TGCTTCTGTGCACCTGCTGCAGGCTCTTTTTATGAA...TGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp CAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAATTCATGAAAGCCTTCGGAAGGAGCGTGGGTTaGAGGCCTGACACTGTGGTG +
Preference number: 2 (lower is better)
Translates to: QASCVVSAYYILKFMKAFGRSVG*RPDTVV
Trigger: CACCACAGTGTCAGGCCTCCAACCCACGCTCCTTCC...GAAGGCTTTCATGAATTTTAGTATGTAATACGCACTGACGACACATGATGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp CCTTGCTTCCTGTTTCAACAAGTCCACTTGCTAAAATGCATGATTCCAAATCTAGGAAGGAGCGTGGGTTaGAGGCCTGACACTGTGGTG +
Preference number: 2 (lower is better)
Translates to: PCFLFQQVHLLKCMIPNLGRSVG*RPDTVV
Trigger: CACCACAGTGTCAGGCCTCCAACCCACGCTCCTTCC...TAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR TCA 90 bp CCTTGCTTCCTGTTTCAACAAGTCCACTTGCTAAAATGCATGATTCCAAATCTACACTGGTGCAGTCGCTaGGTCCATCCATTCAGGCCT +
Preference number: 2 (lower is better)
Translates to: PCFLFQQVHLLKCMIPNLHWCSR*VHPFRP
Trigger: AGGCCTGAATGGATGGACTCAGCGACTGCACCAGTG...TAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp ATGGTTTGCCTCCAATCCCAGAAAGCTAGTTCTGATGCTAAAATTCTGTTTAAGCCATCCATTCAGGCCTaGAGCTTTCCAGGGAGAGCC +
Preference number: 2 (lower is better)
Translates to: MVCLQSQKASSDAKILFKPSIQA*SFPGRA
Trigger: GGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGG...CTTAAACAGAATTTTAGCATCAGAACTAGCTTTCTGGGATTGGAGGCAAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp TTGGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGTCAAATGACTTTAAAAATCAATGGGTaGACATATGGACTCGACTGC +
Preference number: 2 (lower is better)
Translates to: LVHRRIWLAKGNSHSQMTLKING*TYGLDC
Trigger: GCAGTCGAGTCCATATGTCCACCCATTGATTTTTAA...AGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp ATGGTTTGCCTCCAATCCCAGAAAGCTAGTTCTGATGCTAAAATTCTGTTTAAGCACTGTGGTGCACGATaGATGACTGCTGGTCTCCTC +
Preference number: 2 (lower is better)
Translates to: MVCLQSQKASSDAKILFKHCGAR*MTAGLL
Trigger: GAGGAGACCAGCAGTCATGCATCGTGCACCACAGTG...CTTAAACAGAATTTTAGCATCAGAACTAGCTTTCTGGGATTGGAGGCAAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp GACAGTTTGCTTTATGTGTTCAGACAATCAAGGCTCGCCTTCCAGGCACAGCCCGTCCACTTGCTAAAATaGATGATTCCAAATCTACCT +
Preference number: 2 (lower is better)
Translates to: DSLLYVFRQSRLAFQAQPVHLLK*MIPNLP
Trigger: AGGTAGATTTGGAATCATGCATTTTAGCAAGTGGAC...GGGCTGTGCCTGGAAGGCGAGCCTTGATTGTCTGAACACATAAAGCAAACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CAA 90 bp ATGGGCTACACTGAAGGCCCTTGCTTCCTGTTTCAACAAGTCCACTaGCTAAAATGCATGATTCCAAATCTACCTTCTACTCTCACTGTG +
Preference number: 2 (lower is better)
Translates to: MGYTEGPCFLFQQVH*LKCMIPNLPSTLTV
Trigger: CACAGTGAGAGTAGAAGGTAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGGGCCTTCAGTGTAGCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp GCTAAGGGCAACAGTCACAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCAGTCCACTTGCTAAAATaGATGATTCCAAATCTACCT +
Preference number: 2 (lower is better)
Translates to: AKGNSHSQMTIHSCRQEAVHLLK*MIPNLP
Trigger: AGGTAGATTTGGAATCATGCATTTTAGCAAGTGGAC...TGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp CTTGCTAAAATGCATGATTCCAAATCTACCTTCTACTCTCACTGTGAAAGTCTTACGATGCATGACTGCTaGTCTCCTCAGAAGTGCGGC +
Preference number: 2 (lower is better)
Translates to: LAKMHDSKSTFYSHCESLTMHDC*SPQKCG
Trigger: GCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGT...AAGACTTTCACAGTGAGAGTAGAAGGTAGATTTGGAATCATGCATTTTAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp CTTGCTAAAATGCATGATTCCAAATCTACCTTCTACTCTCACTGTGAAAGTCTTGGACGTCATCCTTGCTaGCATCGTGTCCAGACTGGA +
Preference number: 2 (lower is better)
Translates to: LAKMHDSKSTFYSHCESLGRHPC*HRVQTG
Trigger: TCCAGTCTGGACACGATGCCAGCAAGGATGACGTCC...AAGACTTTCACAGTGAGAGTAGAAGGTAGATTTGGAATCATGCATTTTAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR GCA 90 bp CTCTCATCTGTCATCCAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAATTCATAAAAAGAGCCTaGAGCAGGTGCACAGAAGCA +
Preference number: 2 (lower is better)
Translates to: LSSVIQASCVVSAYYILKFIKRA*SRCTEA
Trigger: TGCTTCTGTGCACCTGCTGCAGGCTCTTTTTATGAA...TTTTAGTATGTAATACGCACTGACGACACATGATGCTTGGATGACAGATGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CCA 90 bp AATATCACAAAAGCTTTAAAAATCAATGGGTGGACATATGGACTCGACTGCAAATGTGCTGTGTGGCCATaGCTGTCCCTGTACACTAAA +
Preference number: 2 (lower is better)
Translates to: NITKALKINGWTYGLDCKCAVWP*LSLYTK
Trigger: TTTAGTGTACAGGGACAGCCATGGCCACACAGCACA...TTTGCAGTCGAGTCCATATGTCCACCCATTGATTTTTAAAGCTTTTGTGATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 72 bp AGCAGCCCTGCAGGCGCCCTGGGCACATGGGCCACCTaGCATCACGGGCCAGCCACAGGACTCAGCCATCCC +
Preference number: 3 (lower is better)
Translates to: SSPAGALGTWAT*HHGPATGLSHP
Trigger: GGGATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGGGCGCCTGCAGGGCTGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 72 bp GGTCCCTGTAGCAGCCCTGCAGGCGCCCTGGGCACATaGGCCACCTGGCATCACGGGCCAGCCACAGGACTC +
Preference number: 3 (lower is better)
Translates to: GPCSSPAGALGT*ATWHHGPATGL
Trigger: GAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGGGCGCCTGCAGGGCTGCTACAGGGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 72 bp AAGGCTCGCCTTCCAGGCACAGCCCAGTGCCCTGGATaGCATCAGCACAGGCTCCCCTGCCCCGGCCTTGAA +
Preference number: 3 (lower is better)
Translates to: KARLPGTAQCPG*HQHRLPCPGLE
Trigger: TTCAAGGCCGGGGCAGGGGAGCCTGTGCTGATGCCATCCAGGGCACTGGGCTGTGCCTGGAAGGCGAGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 72 bp AATCAAGGCTCGCCTTCCAGGCACAGCCCAGTGCCCTaGATGGCATCAGCACAGGCTCCCCTGCCCCGGCCT +
Preference number: 3 (lower is better)
Translates to: NQGSPSRHSPVP*MASAQAPLPRP
Trigger: AGGCCGGGGCAGGGGAGCCTGTGCTGATGCCATCCAGGGCACTGGGCTGTGCCTGGAAGGCGAGCCTTGATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR GCA 72 bp GTTGGAGGCCTGACACTGTGGTGCACGATGCATGACTaGTGGTCTCCTCAGAAGTGCGGCTGGCGGCCCCCG +
Preference number: 3 (lower is better)
Translates to: VGGLTLWCTMHD*WSPQKCGWRPP
Trigger: CGGGGGCCGCCAGCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCACCACAGTGTCAGGCCTCCAAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 72 bp AGGCCGGGCCCACAGGTTGGCCACAGGGAAGGAGCGTaGGTTGGAGGCCTGACACTGTGGTGCACGATGCAT +
Preference number: 3 (lower is better)
Translates to: RPGPQVGHREGA*VGGLTLWCTMH
Trigger: ATGCATCGTGCACCACAGTGTCAGGCCTCCAACCCACGCTCCTTCCCTGTGGCCAACCTGTGGGCCCGGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CAA 90 bp CCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGGGCCGGGCCCACAGGTaGGCCACAGGGAAGGAGCGT +
Preference number: 3 (lower is better)
Translates to: PGNSKTQRGSPTFRGTHVGRAHR*ATGKER
Trigger: ACGCTCCTTCCCTGTGGCCAACCTGTGGGCCCGGCC...CACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CAA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACGGCCGGGCCCACAGGTaGGCCACAGGGAAGGAGCGT +
Preference number: 3 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHGRAHR*ATGKER
Trigger: ACGCTCCTTCCCTGTGGCCAACCTGTGGGCCCGGCC...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR GCA 72 bp GGGGGCGCACAGAGACCACAAGAGTATGGCAGCACCTaGTGTGGTGGTGCCTGGGAACAGCAAGACACAGCG +
Preference number: 3 (lower is better)
Translates to: GGAQRPQEYGST*CGGAWEQQDTA
Trigger: CGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGGTGCTGCCATACTCTTGTGGTCTCTGTGCGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR TCA 72 bp AGGTTGGCCACAGGGAAGGAGCGTGGGTTGGAGGCCTaGCACTGTGGTGCACGATGCATGACTGCTGGTCTC +
Preference number: 3 (lower is better)
Translates to: RLATGKERGLEA*HCGARCMTAGL
Trigger: GAGACCAGCAGTCATGCATCGTGCACCACAGTGTCAGGCCTCCAACCCACGCTCCTTCCCTGTGGCCAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR GCA 72 bp TTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTaGACAGGTGCCAGTCCACCACCAGGGCCAGCCTTT +
Preference number: 3 (lower is better)
Translates to: LLQMAHHKHTAL*TGASPPPGPAF
Trigger: AAAGGCTGGCCCTGGTGGTGGACTGGCACCTGTGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CAA 90 bp TGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAAGGCAGGACGTCATCCTaGCTGGCATCGTGTCCAGAC +
Preference number: 3 (lower is better)
Translates to: WWCLGTARHSEAPQPLGEGRTSS*LASCPD
Trigger: GTCTGGACACGATGCCAGCAAGGATGACGTCCTGCC...TTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR GCA 72 bp AGGGAAGGAGCGTGGGTTGGAGGCCTGACACTGTGGTaGACGATGCATGACTGCTGGTCTCCTCAGAAGTGC +
Preference number: 3 (lower is better)
Translates to: REGAWVGGLTLW*TMHDCWSPQKC
Trigger: GCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCACCACAGTGTCAGGCCTCCAACCCACGCTCCTTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR GCA 72 bp ATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTTaGTTCAGATGGCGCACCACAAGCACACGGCACTCT +
Preference number: 3 (lower is better)
Translates to: MVGDRHGRTLDS*FRWRTTSTRHS
Trigger: AGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 72 bp CACAGGGAAGGAGCGTGGGTTGGAGGCCTGACACTGTaGTGCACGATGCATGACTGCTGGTCTCCTCAGAAG +
Preference number: 3 (lower is better)
Translates to: HREGAWVGGLTL*CTMHDCWSPQK
Trigger: CTTCTGAGGAGACCAGCAGTCATGCATCGTGCACCACAGTGTCAGGCCTCCAACCCACGCTCCTTCCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 72 bp AAAGGGACCCTAGGAGGCCAGGGTAACTCCAGGAGGTaGCAGGACGTCATCCTTGCTGGCATCGTGTCCAGA +
Preference number: 3 (lower is better)
Translates to: KGTLGGQGNSRR*QDVILAGIVSR
Trigger: TCTGGACACGATGCCAGCAAGGATGACGTCCTGCCACCTCCTGGAGTTACCCTGGCCTCCTAGGGTCCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 72 bp GACAGACACGGCAGAACGCTGGACTCTTGCTTCAGATaGCGCACCACAAGCACACGGCACTCTGCACAGGTG +
Preference number: 3 (lower is better)
Translates to: DRHGRTLDSCFR*RTTSTRHSAQV
Trigger: CACCTGTGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 72 bp CCACAAGAGTATGGCAGCACCTGCTGTGGTGGTGCCTaGGAACAGCAAGACACAGCGAGGCTCCCCAACCTT +
Preference number: 3 (lower is better)
Translates to: PQEYGSTCCGGA*EQQDTARLPNL
Trigger: AAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGGTGCTGCCATACTCTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 72 bp CATCAGCACAGGCTCCCCTGCCCCGGCCTTGAAGCATaGCTGTGTGCACGATTCATACCCATGCTTGGCAGA +
Preference number: 3 (lower is better)
Translates to: HQHRLPCPGLEA*LCARFIPMLGR
Trigger: TCTGCCAAGCATGGGTATGAATCGTGCACACAGCCATGCTTCAAGGCCGGGGCAGGGGAGCCTGTGCTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CAA 90 bp AGGCAGCTGCCTTTGACATCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGAGGCAGGACGTCATCCTaGCTGGCATCGTGTCCAGAC +
Preference number: 3 (lower is better)
Translates to: RQLPLTSRETAVTGNSSGGRTSS*LASCPD
Trigger: GTCTGGACACGATGCCAGCAAGGATGACGTCCTGCC...TCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGATGTCAAAGGCAGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CAA 90 bp TGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAAACCAGGCAGCTGCCTTaGACATCCAGAGAAACCGCT +
Preference number: 3 (lower is better)
Translates to: WWCLGTARHSEAPQPLGETRQLP*TSRETA
Trigger: AGCGGTTTCTCTGGATGTCAAAGGCAGCTGCCTGGT...TTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CAA 90 bp CTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCCAGAACGCTGGACTCTaGCTTCAGATGGCGCACCAC +
Preference number: 3 (lower is better)
Translates to: LGTARHSEAPQPLGEHMCQNAGL*LQMAHH
Trigger: GTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCTG...GCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CAA 90 bp CCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCAGAACGCTGGACTCTaGCTTCAGATGGCGCACCAC +
Preference number: 3 (lower is better)
Translates to: PGNSKTQRGSPTFRGTHVQNAGL*LQMAHH
Trigger: GTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCTG...CACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR GCA 72 bp CACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTaGACGAAGCTTTGGTTCACAGGCGCATCTGGCTGG +
Preference number: 3 (lower is better)
Translates to: HSEAPQPLGEHM*TKLWFTGASGW
Trigger: CCAGCCAGATGCGCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 72 bp GGCAGGACGTCATCCTTGCTGGCATCGTGTCCAGACTaGAGAGGGACCACCTTGATGGTTTGCCTCCAATCC +
Preference number: 3 (lower is better)
Translates to: GRTSSLLASCPD*RGTTLMVCLQS
Trigger: GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAGCAAGGATGACGTCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CAA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACCAGAACGCTGGACTCTaGCTTCAGATGGCGCACCAC +
Preference number: 3 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHQNAGL*LQMAHH
Trigger: GTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCTG...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CAA 90 bp AGGCAGCTGCCTTTGACATCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATGGAGAGGGACCACCTaGATGGTTTGCCTCCAATCC +
Preference number: 3 (lower is better)
Translates to: RQLPLTSRETAVTGNSSGWRGTT*MVCLQS
Trigger: GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCA...TCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGATGTCAAAGGCAGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CAA 90 bp CTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCCAACAGAAGCCAACCTaGGTCACACAGGTAGTGAGG +
Preference number: 3 (lower is better)
Translates to: LGTARHSEAPQPLGEHMCQQKPT*VTQVVR
Trigger: CCTCACTACCTGTGTGACCAAGGTTGGCTTCTGTTG...GCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 72 bp CCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTaGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACA +
Preference number: 3 (lower is better)
Translates to: PQPLGEHMCTKL*FTGASGWLRAT
Trigger: TGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CAA 90 bp AGGCAGCTGCCTTTGACATCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGAGACCACCTTGATGGTTaGCCTCCAATCCCAGAAAGC +
Preference number: 3 (lower is better)
Translates to: RQLPLTSRETAVTGNSSGDHLDG*PPIPES
Trigger: GCTTTCTGGGATTGGAGGCAAACCATCAAGGTGGTC...TCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGATGTCAAAGGCAGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR TCA 72 bp TGCTGGCATCGTGTCCAGACTGGAGAGGGACCACCTTaGTGGTTTGCCTCCAATCCCAGAAAGCTAGTTCTG +
Preference number: 3 (lower is better)
Translates to: CWHRVQTGEGPP*WFASNPRKLVL
Trigger: CAGAACTAGCTTTCTGGGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CAA 90 bp ATGGTTTGCCTCCAATCCCAGAAAGCTAGTTCTGATGCTAAAATTCTGTTTAAGGGCCGGGCCCACAGGTaGGCCACAGGGAAGGAGCGT +
Preference number: 3 (lower is better)
Translates to: MVCLQSQKASSDAKILFKGRAHR*ATGKER
Trigger: ACGCTCCTTCCCTGTGGCCAACCTGTGGGCCCGGCC...CTTAAACAGAATTTTAGCATCAGAACTAGCTTTCTGGGATTGGAGGCAAACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CAA 90 bp GCTAAGGGCAACAGTCACAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCATGGAGAGGGACCACCTaGATGGTTTGCCTCCAATCC +
Preference number: 3 (lower is better)
Translates to: AKGNSHSQMTIHSCRQEAWRGTT*MVCLQS
Trigger: GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCA...TGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CAA 90 bp CCGGCAGGAACACATTTCCATCGCACACCCACCCATAGGGGCCACCAGTCGAGATTTCAACAAGTCCACTaGCTAAAATGCATGATTCCA +
Preference number: 3 (lower is better)
Translates to: PAGTHFHRTPTHRGHQSRFQQVH*LKCMIP
Trigger: TGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAA...TCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGATGGAAATGTGTTCCTGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR TCA 72 bp GCATCTGGCTGGCTAAGGGCAACAGTCACAGTCAAATaGCTATTCACAGCTGCAGACAGGAGGCAAGACAGA +
Preference number: 3 (lower is better)
Translates to: ASGWLRATVTVK*LFTAADRRQDR
Trigger: TCTGTCTTGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CCA 72 bp AAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATaGGCTACACTGAAGGCCCTTGCTTCCTGTTTCAAC +
Preference number: 3 (lower is better)
Translates to: KPLSQATALDQE*ATLKALASCFN
Trigger: GTTGAAACAGGAAGCAAGGGCCTTCAGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CAA 90 bp CAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCAAGACAGAAGCAAGTGTCGACCACCTTGATGGTTaGCCTCCAATCCCAGAAAGC +
Preference number: 3 (lower is better)
Translates to: QSNDYSQLQTGGKTEASVDHLDG*PPIPES
Trigger: GCTTTCTGGGATTGGAGGCAAACCATCAAGGTGGTC...GACACTTGCTTCTGTCTTGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR-3UTR CAA 90 bp GACAGTTTGCTTTATGTGTTCAGACAATCAAGGCTCGCCTTCCAGGCACAGCCCTTTCAACAAGTCCACTaGCTAAAATGCATGATTCCA +
Preference number: 3 (lower is better)
Translates to: DSLLYVFRQSRLAFQAQPFQQVH*LKCMIP
Trigger: TGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAA...GGGCTGTGCCTGGAAGGCGAGCCTTGATTGTCTGAACACATAAAGCAAACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR GCA 72 bp ATACTAAAATTCATGAAAGCCTTCATAAAAAGAGCCTaGAGCAGGTGCACAGAAGCAGGGTCCACCACTGTC +
Preference number: 3 (lower is better)
Translates to: ILKFMKAFIKRA*SRCTEAGSTTV
Trigger: GACAGTGGTGGACCCTGCTTCTGTGCACCTGCTGCAGGCTCTTTTTATGAAGGCTTTCATGAATTTTAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GCCCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATGTGCGTGCCGGGCGGTaGGCGGGCTGTGGCCACTAC +
Preference number: 4 (lower is better)
Translates to: ALGTWATWHHGPATGLSHVRAGR*AGCGHY
Trigger: GTAGTGGCCACAGCCCGCGCACCGCCCGGCACGCAC...ATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TGCACGATGCATGACTGCTGGTCTCCTCAGAAGTGCGGCTGGCGGCCCCCGCGCGGCGCCCTGGGCACATaGGCCACCTGGCATCACGGG +
Preference number: 4 (lower is better)
Translates to: CTMHDCWSPQKCGWRPPRGALGT*ATWHHG
Trigger: CCCGTGATGCCAGGTGGCCCATGTGCCCAGGGCGCC...GCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATCCCTTTCTTCTTCTACCTaGGGCGCCCGCGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PGHMGHLASRASHRTQPSLSSST*GARGLP
Trigger: GGGCAGCCCGCGGGCGCCTCAGGTAGAAGAAGAAAG...GGATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351989.8
ENST00000383024.6
CDS-3UTR GCA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGCCGCGCCCTGGCCCGTaGCACCTCCCTCACACGTCC +
Preference number: 4 (lower is better)
Translates to: PEARKGREGLSVQRGAFRPRPGP*HLPHTS
Trigger: GGACGTGTGAGGGAGGTGGCACGGGCCAGGGCGCGG...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GCCCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATTTGCAGGGGAGGTGGTaGAGACTGCTCACGGGGCAG +
Preference number: 4 (lower is better)
Translates to: ALGTWATWHHGPATGLSHLQGRW*RLLTGQ
Trigger: CTGCCCCGTGAGCAGTCTCCACCACCTCCCCTGCAA...ATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp GCCCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATATGGCCTGGACCAGGTaGCCACCCGAGACTCTCTGT +
Preference number: 4 (lower is better)
Translates to: ALGTWATWHHGPATGLSHMAWTR*PPETLC
Trigger: ACAGAGAGTCTCGGGTGGTCACCTGGTCCAGGCCAT...ATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp TGCACGATGCATGACTGCTGGTCTCCTCAGAAGTGCGGCTGGCGGCCCCCGCGCCCGCACGTCGCGCTCTaGTCCTGTGTACAGCACCTT +
Preference number: 4 (lower is better)
Translates to: CTMHDCWSPQKCGWRPPRPHVAL*SCVQHL
Trigger: AAGGTGCTGTACACAGGAGCAGAGCGCGACGTGCGG...GCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GTAGGGGGCATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTTGCTTCAGATGGTCTCCTCAGAAGTaGGGCTGGCGGCCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: VGGMVGDRHGRTLDSCFRWSPQK*GWRPPR
Trigger: GCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCA...TCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCATGCCCCCTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TGCACGATGCATGACTGCTGGTCTCCTCAGAAGTGCGGCTGGCGGCCCCCGCGCCAGCGGCTCTGTAGGTaGGCGGCCACGACTTTTGAG +
Preference number: 4 (lower is better)
Translates to: CTMHDCWSPQKCGWRPPRQRLCR*AATTFE
Trigger: CTCAAAAGTCGTGGCCGCCCACCTACAGAGCCGCTG...GCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GCCCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATTGCACACCTCGACTTTaGCCTTCACCTGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: ALGTWATWHHGPATGLSHCTPRL*PSPAPG
Trigger: CCCTGGGGCAGGTGAAGGCCAAAGTCGAGGTGTGCA...ATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATCCTGCACACCTCGACTTTaGCCTTCACCTGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PGHMGHLASRASHRTQPSCTPRL*PSPAPG
Trigger: CCCTGGGGCAGGTGAAGGCCAAAGTCGAGGTGTGCA...GGATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TGCACGATGCATGACTGCTGGTCTCCTCAGAAGTGCGGCTGGCGGCCCCCGCGCGATTGGCTGGCAAGATaGGCCTCTCGGACTCCGCCT +
Preference number: 4 (lower is better)
Translates to: CTMHDCWSPQKCGWRPPRDWLAR*ASRTPP
Trigger: AGGCGGAGTCCGAGAGGCCCATCTTGCCAGCCAATC...GCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATCCGGAAGGAGCGTGGGTTaGAGGCCTGACACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: PGHMGHLASRASHRTQPSGRSVG*RPDTVV
Trigger: CACCACAGTGTCAGGCCTCCAACCCACGCTCCTTCC...GGATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATCCAGACAGGGCGGACCTTaGGGACACGCTGCATGTACT +
Preference number: 4 (lower is better)
Translates to: PGHMGHLASRASHRTQPSRQGGP*GHAACT
Trigger: AGTACATGCAGCGTGTCCTCAAGGTCCGCCCTGTCT...GGATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp ATCGCACACCCACCCATAGGGGCCACCAGTCGAGAAGCAAGCTGGGCACCAGGCCGTGGGTTGGAGGCCTaGCACTGTGGTGCACGATGC +
Preference number: 4 (lower is better)
Translates to: IAHPPIGATSREASWAPGRGLEA*HCGARC
Trigger: GCATCGTGCACCACAGTGTCAGGCCTCCAACCCACG...GCCTGGTGCCCAGCTTGCTTCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp TGCACGATGCATGACTGCTGGTCTCCTCAGAAGTGCGGCTGGCGGCCCCCGCGCCCAGGCAGCTGCCTTTaGCATCCAGAGAAACCGCTG +
Preference number: 4 (lower is better)
Translates to: CTMHDCWSPQKCGWRPPRPGSCL*HPEKPL
Trigger: CAGCGGTTTCTCTGGATGTCAAAGGCAGCTGCCTGG...GCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CCAGCTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCCCCCTGCCCCGGCCTTaGAGCATGGCTGTGTGCACG +
Preference number: 4 (lower is better)
Translates to: PAATGAVAESIHSGLELSPLPRP*SMAVCT
Trigger: CGTGCACACAGCCATGCTTCAAGGCCGGGGCAGGGG...GGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAGCTGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATGGCTGCGTCCTGCCGCGCTGTaGGCTGGCGGCTTAGTCAAG +
Preference number: 4 (lower is better)
Translates to: GAFQGEPLLHMCAVWPWLRPAAL*AGGLVK
Trigger: CTTGACTAAGCCGCCAGCGCACAGCGCGGCAGGACG...CAGCCATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCAGCTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCCATCACCGCTTCTCCTaGGGGCCCACACGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: PAATGAVAESIHSGLELSHHRFS*GPTRER
Trigger: CCGCTCCCGTGTGGGCCCGCAGGAGAAGCGGTGATG...GGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CTGGCATCGTGTCCAGACTGGAGAGGGACCACCTTGATGGTTTGCCTCCAATCCGTGCGTGCCGGGCGGTaGGCGGGCTGTGGCCACTAC +
Preference number: 4 (lower is better)
Translates to: LASCPDWRGTTLMVCLQSVRAGR*AGCGHY
Trigger: GTAGTGGCCACAGCCCGCGCACCGCCCGGCACGCAC...GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GCCCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATCCAAAGGGACAAGCATaGACGTCCCCACTGACAGGG +
Preference number: 4 (lower is better)
Translates to: ALGTWATWHHGPATGLSHPKGQA*TSPLTG
Trigger: CCCTGTCAGTGGGGACGTGCATGCTTGTCCCTTTGG...ATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATGGCTGGGCACTCTGCACAGGTaGCAGTCCACCACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GAFQGEPLLHMCAVWPWLGTLHR*QSTTRA
Trigger: GGCCCTGGTGGTGGACTGGCACCTGTGCAGAGTGCC...CAGCCATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GTAGGGGGCATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTTGCTTCAGATCACGGGGCAGCGCTTaGAAGGGGCGAGCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: VGGMVGDRHGRTLDSCFRSRGSA*KGRARL
Trigger: GAGCCGAGCTCGCCCCTTCCAAGCGCTGCCCCGTGA...TCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCATGCCCCCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCTGCTGTGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTTCACGGGGCAGCGCTTaGAAGGGGCGAGCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: PAVVVPGNSKTQRGSPTFSRGSA*KGRARL
Trigger: GAGCCGAGCTCGCCCCTTCCAAGCGCTGCCCCGTGA...AAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATGGCACATGGGCCACCTaGCATCACGGGCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: GLELSRESRCSTCVLCGHGTWAT*HHGPAT
Trigger: TGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCC...ATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp AGAACGCTGGACTCTTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTGCAGCCCTGCAGGCGCCCTaGGCACATGGGCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: RTLDSCFRWRTTSTRHSAALQAP*AHGPPG
Trigger: GCCAGGTGGCCCATGTGCCCAGGGCGCCTGCAGGGC...TGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp GCCCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATCCGATGTCTCCTGCTTaGCCATCTTGCTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: ALGTWATWHHGPATGLSHPMSPA*PSCCSH
Trigger: GTGAGAGCAGCAAGATGGTCAAGCAGGAGACATCGG...ATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCAGCTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCGGAGGTGGTGGAGACTaGTCACGGGGCAGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: PAATGAVAESIHSGLELSGGGGD*SRGSAW
Trigger: CCAAGCGCTGCCCCGTGAGCAGTCTCCACCACCTCC...GGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp ATCGCACACCCACCCATAGGGGCCACCAGTCGAGAAGCAAGCTGGGCACCAGGCCCGCACGTCGCGCTCTaGTCCTGTGTACAGCACCTT +
Preference number: 4 (lower is better)
Translates to: IAHPPIGATSREASWAPGPHVAL*SCVQHL
Trigger: AAGGTGCTGTACACAGGAGCAGAGCGCGACGTGCGG...GCCTGGTGCCCAGCTTGCTTCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCAGCTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCCTCACACGTCCACGGTaGACAGGGGCTCACCGCCAG +
Preference number: 4 (lower is better)
Translates to: PAATGAVAESIHSGLELSLTRPR*TGAHRQ
Trigger: CTGGCGGTGAGCCCCTGTGCACCGTGGACGTGTGAG...GGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CTGGCATCGTGTCCAGACTGGAGAGGGACCACCTTGATGGTTTGCCTCCAATCCTGGTCTCCTCAGAAGTaGGGCTGGCGGCCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: LASCPDWRGTTLMVCLQSWSPQK*GWRPPR
Trigger: GCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCA...GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCTGCTGTGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTGGCACTCTGCACAGGTaGCAGTCCACCACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PAVVVPGNSKTQRGSPTFGTLHR*QSTTRA
Trigger: GGCCCTGGTGGTGGACTGGCACCTGTGCAGAGTGCC...AAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCAGCTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCCAGCACAGGCTCCCCTaGCCCGGCCTTGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: PAATGAVAESIHSGLELSQHRLP*PGLEAW
Trigger: CCATGCTTCAAGGCCGGGGCAGGGGAGCCTGTGCTG...GGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GTAGGGGGCATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTTGCTTCAGACAGCACAGGCTCCCCTaGCCCGGCCTTGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: VGGMVGDRHGRTLDSCFRQHRLP*PGLEAW
Trigger: CCATGCTTCAAGGCCGGGGCAGGGGAGCCTGTGCTG...TCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCATGCCCCCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp ATCGCACACCCACCCATAGGGGCCACCAGTCGAGAAGCAAGCTGGGCACCAGGCACCGCCGCAGCCATCTaGAAAGCCTGTCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: IAHPPIGATSREASWAPGTAAAI*KACPGS
Trigger: AGAGCCTGGACAGGCTTTCCAGATGGCTGCGGCGGT...GCCTGGTGCCCAGCTTGCTTCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351989.8
ENST00000383024.6
CDS-3UTR CCA 90 bp CCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATCCGGGCGGACGCCACAATaGACATCTTGGGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: PGHMGHLASRASHRTQPSGRTPQ*TSWASF
Trigger: GAAAGAAGCCCAAGATGTCCATTGTGGCGTCCGCCC...GGATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGGGCACATGGGCCACCTaGCATCACGGGCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: LPLVQSLSPSIQAWSFPGGTWAT*HHGPAT
Trigger: TGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCC...CCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GCCCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATGAGACCACAAGAGTATaGCAGCACCTGCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ALGTWATWHHGPATGLSHETTRV*QHLLWW
Trigger: CCACCACAGCAGGTGCTGCCATACTCTTGTGGTCTC...ATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGCGTGGGTTGGAGGCCTaGCACTGTGGTGCACGATGC +
Preference number: 4 (lower is better)
Translates to: LPLVQSLSPSIQAWSFPGRGLEA*HCGARC
Trigger: GCATCGTGCACCACAGTGTCAGGCCTCCAACCCACG...CCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CCGGCAGGAACACATTTCCATCGCACACCCACCCATAGGGGCCACCAGTCGAGAACCAGGGCCAGCCTTTaGGCACACCCTGGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: PAGTHFHRTPTHRGHQSRTRASL*AHPGAS
Trigger: TGAGGCACCAGGGTGTGCTCAAAGGCTGGCCCTGGT...TCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGATGGAAATGTGTTCCTGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CTGGCATCGTGTCCAGACTGGAGAGGGACCACCTTGATGGTTTGCCTCCAATCCCCCCTGCCCCGGCCTTaGAGCATGGCTGTGTGCACG +
Preference number: 4 (lower is better)
Translates to: LASCPDWRGTTLMVCLQSPLPRP*SMAVCT
Trigger: CGTGCACACAGCCATGCTTCAAGGCCGGGGCAGGGG...GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp ATCGCACACCCACCCATAGGGGCCACCAGTCGAGAAGCAAGCTGGGCACCAGGCGGGAAACTCCAGCTCTaGAGATCGGCTCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: IAHPPIGATSREASWAPGGKLQL*RSAQGL
Trigger: AAGCCCCTGAGCCGATCTGCAGAGCTGGAGTTTCCC...GCCTGGTGCCCAGCTTGCTTCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp TGCACGATGCATGACTGCTGGTCTCCTCAGAAGTGCGGCTGGCGGCCCCCGCGCTGTACTCGTGCAGGATaGAGACCTCGGATTTCCCGT +
Preference number: 4 (lower is better)
Translates to: CTMHDCWSPQKCGWRPPRCTRAG*RPRISR
Trigger: ACGGGAAATCCGAGGTCTGCATCCTGCACGAGTACA...GCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GCCCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATACCTTGAGGACACGCTaGATGTACTCGTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: ALGTWATWHHGPATGLSHTLRTR*MYSCRM
Trigger: CATCCTGCACGAGTACATGCAGCGTGTCCTCAAGGT...ATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTCACCCGCGCACTGTGTaGTTGCCACACGCCATGACG +
Preference number: 4 (lower is better)
Translates to: QSLSPSIQAWSFPGRAAAHPRTV*LPHAMT
Trigger: CGTCATGGCGTGTGGCAAGCACACAGTGCGCGGGTG...AGCAGCGGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATCCTCTCACGGCCATACATaGGCAGTAAAGACCCCCAGT +
Preference number: 4 (lower is better)
Translates to: PGHMGHLASRASHRTQPSSHGHT*AVKTPS
Trigger: ACTGGGGGTCTTTACTGCGCATGTATGGCCGTGAGA...GGATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp TGCACGATGCATGACTGCTGGTCTCCTCAGAAGTGCGGCTGGCGGCCCCCGCGCTCTCACGGCCATACATaGGCAGTAAAGACCCCCAGT +
Preference number: 4 (lower is better)
Translates to: CTMHDCWSPQKCGWRPPRSHGHT*AVKTPS
Trigger: ACTGGGGGTCTTTACTGCGCATGTATGGCCGTGAGA...GCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp ATCGCACACCCACCCATAGGGGCCACCAGTCGAGAAGCAAGCTGGGCACCAGGCGAGTATGGCAGCACCTaGTGTGGTGGTGCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: IAHPPIGATSREASWAPGEYGST*CGGAWE
Trigger: TTCCCAGGCACCACCACAGCAGGTGCTGCCATACTC...GCCTGGTGCCCAGCTTGCTTCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCGGCAGGAACACATTTCCATCGCACACCCACCCATAGGGGCCACCAGTCGAGACCAGGCACAGCCCAGTaGCCTGGATGGCATCAGCAC +
Preference number: 4 (lower is better)
Translates to: PAGTHFHRTPTHRGHQSRPGTAQ*PGWHQH
Trigger: GTGCTGATGCCATCCAGGGCACTGGGCTGTGCCTGG...TCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGATGGAAATGTGTTCCTGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGCGTTTGCAGGGGAGGTaGTGGAGACTGCTCACGGGG +
Preference number: 4 (lower is better)
Translates to: PEARKGREGLSVQRGAFRRLQGR*WRLLTG
Trigger: CCCCGTGAGCAGTCTCCACCACCTCCCCTGCAAACG...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATCAGCGGCTCTGTAGGTaGGCGGCCACGACTTTTGAG +
Preference number: 4 (lower is better)
Translates to: GLELSRESRCSTCVLCGHQRLCR*AATTFE
Trigger: CTCAAAAGTCGTGGCCGCCCACCTACAGAGCCGCTG...ATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GTAGGGGGCATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTTGCTTCAGAACAGCCCAGCCTTGCTaGTCAGCTCGTAGACCCGCG +
Preference number: 4 (lower is better)
Translates to: VGGMVGDRHGRTLDSCFRTAQPC*SARRPA
Trigger: CGCGGGTCTACGAGCTGACCAGCAAGGCTGGGCTGT...TCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCATGCCCCCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCGGCAGGAACACATTTCCATCGCACACCCACCCATAGGGGCCACCAGTCGAGAACAGCCCAGCCTTGCTaGTCAGCTCGTAGACCCGCG +
Preference number: 4 (lower is better)
Translates to: PAGTHFHRTPTHRGHQSRTAQPC*SARRPA
Trigger: CGCGGGTCTACGAGCTGACCAGCAAGGCTGGGCTGT...TCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGATGGAAATGTGTTCCTGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACGGCGCCCTGGGCACATaGGCCACCTGGCATCACGGG +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHGALGT*ATWHHG
Trigger: CCCGTGATGCCAGGTGGCCCATGTGCCCAGGGCGCC...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATGGCTGCCTTTGAGCACACCCTaGTGCCTCAGACTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: GAFQGEPLLHMCAVWPWLPLSTP*CLRLRQ
Trigger: CTGCCGGAGTCTGAGGCACCAGGGTGTGCTCAAAGG...CAGCCATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATGGCTGCACAGCCCAGTGCCCTaGATGGCATCAGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: GAFQGEPLLHMCAVWPWLHSPVP*MASAQA
Trigger: AGCCTGTGCTGATGCCATCCAGGGCACTGGGCTGTG...CAGCCATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CAA 72 bp GCCAGGGTAACTCCAGGAGGTGGCAGGACGTCATCCTaGCTGGCATCGTGTCCAGACTGGAGAGGGACCACC +
Preference number: 4 (lower is better)
Translates to: ARVTPGGGRTSS*LASCPDWRGTT
Trigger: GGTGGTCCCTCTCCAGTCTGGACACGATGCCAGCAAGGATGACGTCCTGCCACCTCCTGGAGTTACCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACCATGCACAAGTCCGCTaGGACCCGGGCGCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHHAQVR*DPGASC
Trigger: GCAGGACGCGCCCGGGTCTCAGCGGACTTGTGCATG...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGATGGCCTGGACCAGGTaGCCACCCGAGACTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LPLVQSLSPSIQAWSFPGMAWTR*PPETLC
Trigger: ACAGAGAGTCTCGGGTGGTCACCTGGTCCAGGCCAT...CCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp TGCACGATGCATGACTGCTGGTCTCCTCAGAAGTGCGGCTGGCGGCCCCCGCGCAAGAATGGGCTACACTaGAGGCCCTTGCTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: CTMHDCWSPQKCGWRPPRKNGLH*RPLLPV
Trigger: AACAGGAAGCAAGGGCCTTCAGTGTAGCCCATTCTT...GCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GTAGGGGGCATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTTGCTTCAGAGCACCACTGGACGTTTaGAGGGGAGGTGGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: VGGMVGDRHGRTLDSCFRAPLDV*RGGGGD
Trigger: GTCTCCACCACCTCCCCTGCAAACGTCCAGTGGTGC...TCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCATGCCCCCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp TGCACGATGCATGACTGCTGGTCTCCTCAGAAGTGCGGCTGGCGGCCCCCGCGCTTGGTCATCATCGGCTaGACACTTGTCTCTCCATCG +
Preference number: 4 (lower is better)
Translates to: CTMHDCWSPQKCGWRPPRLVIIG*TLVSPS
Trigger: CGATGGAGAGACAAGTGTGCAGCCGATGATGACCAA...GCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GCCCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATTTGGTCATCATCGGCTaGACACTTGTCTCTCCATCG +
Preference number: 4 (lower is better)
Translates to: ALGTWATWHHGPATGLSHLVIIG*TLVSPS
Trigger: CGATGGAGAGACAAGTGTGCAGCCGATGATGACCAA...ATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATGGCTGACAACAGCCCAGCCTTaGTGGTCAGCTCGTAGACCC +
Preference number: 4 (lower is better)
Translates to: GAFQGEPLLHMCAVWPWLTTAQP*WSARRP
Trigger: GGGTCTACGAGCTGACCAGCAAGGCTGGGCTGTTGT...CAGCCATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp TGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACCCGCGCACTGTGTaGTTGCCACACGCCATGACG +
Preference number: 4 (lower is better)
Translates to: WWCLGTARHSEAPQPLGEHPRTV*LPHAMT
Trigger: CGTCATGGCGTGTGGCAAGCACACAGTGCGCGGGTG...TTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp TTGGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGTCAAATGACTCCGCGCCCTGGCCCGTaGCACCTCCCTCACACGTCC +
Preference number: 4 (lower is better)
Translates to: LVHRRIWLAKGNSHSQMTPRPGP*HLPHTS
Trigger: GGACGTGTGAGGGAGGTGGCACGGGCCAGGGCGCGG...AGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATTCCAGGGAGAGCCGCTaGTCCACATGTGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: GLELSRESRCSTCVLCGHSRESR*STCVLC
Trigger: ACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGA...ATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATCACCTGCTGTGGTGGTaGCTGGGAACAGCAAGACAC +
Preference number: 4 (lower is better)
Translates to: GLELSRESRCSTCVLCGHHLLWW*LGTARH
Trigger: GTGTCTTGCTGTTCCCAGGCACCACCACAGCAGGTG...ATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp AGAACGCTGGACTCTTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTGCACAGCACAGGCTCCCCTaGCCCGGCCTTGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: RTLDSCFRWRTTSTRHSAQHRLP*PGLEAW
Trigger: CCATGCTTCAAGGCCGGGGCAGGGGAGCCTGTGCTG...TGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCAGCTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCACCGCCGCAGCCATCTaGAAAGCCTGTCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PAATGAVAESIHSGLELSTAAAI*KACPGS
Trigger: AGAGCCTGGACAGGCTTTCCAGATGGCTGCGGCGGT...GGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351989.8
ENST00000383024.6
CDS-3UTR CCA 90 bp CCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGGCGGTGCGCGGGCTGTaGCCACTACAGTTCGGGTCT +
Preference number: 4 (lower is better)
Translates to: PGNSKTQRGSPTFRGTHVAVRGL*PLQFGS
Trigger: AGACCCGAACTGTAGTGGCCACAGCCCGCGCACCGC...CACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCTGCTGTGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTCAGCGGCTCTGTAGGTaGGCGGCCACGACTTTTGAG +
Preference number: 4 (lower is better)
Translates to: PAVVVPGNSKTQRGSPTFQRLCR*AATTFE
Trigger: CTCAAAAGTCGTGGCCGCCCACCTACAGAGCCGCTG...AAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGGATTGGCTGGCAAGATaGGCCTCTCGGACTCCGCCT +
Preference number: 4 (lower is better)
Translates to: PEARKGREGLSVQRGAFRDWLAR*ASRTPP
Trigger: AGGCGGAGTCCGAGAGGCCCATCTTGCCAGCCAATC...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACGGCTCACCGCCAGGCTaGGCGGACGCCACAATGGAC +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHGSPPG*ADATMD
Trigger: GTCCATTGTGGCGTCCGCCCAGCCTGGCGGTGAGCC...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTGGAAGGAGCGTGGGTTaGAGGCCTGACACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: QSLSPSIQAWSFPGRAAAGRSVG*RPDTVV
Trigger: CACCACAGTGTCAGGCCTCCAACCCACGCTCCTTCC...AGCAGCGGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGCACAGGGAAGGAGCGTaGGTTGGAGGCCTGACACTG +
Preference number: 4 (lower is better)
Translates to: PEARKGREGLSVQRGAFRHREGA*VGGLTL
Trigger: CAGTGTCAGGCCTCCAACCCACGCTCCTTCCCTGTG...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCGGCACATGGGCCACCTaGCATCACGGGCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: LGTARHSEAPQPLGEHMCGTWAT*HHGPAT
Trigger: TGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCC...GCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TTGGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGTCAAATGACTGCCCTGCAGGCGCCCTaGGCACATGGGCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: LVHRRIWLAKGNSHSQMTALQAP*AHGPPG
Trigger: GCCAGGTGGCCCATGTGCCCAGGGCGCCTGCAGGGC...AGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTGCCCTGCAGGCGCCCTaGGCACATGGGCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: SRETAVTGNSSGSRMGYTALQAP*AHGPPG
Trigger: GCCAGGTGGCCCATGTGCCCAGGGCGCCTGCAGGGC...AGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATCCGCTCTGGATCAAGAATaGGCTACACTGAAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: PGHMGHLASRASHRTQPSALDQE*ATLKAL
Trigger: AAGGGCCTTCAGTGTAGCCCATTCTTGATCCAGAGC...GGATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTCCTTTGAGCACACCCTaGTGCCTCAGACTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: QSLSPSIQAWSFPGRAAAPLSTP*CLRLRQ
Trigger: CTGCCGGAGTCTGAGGCACCAGGGTGTGCTCAAAGG...AGCAGCGGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGGCCCAGTGCCCTGGATaGCATCAGCACAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: PGNSKTQRGSPTFRGTHVAQCPG*HQHRLP
Trigger: GGGGAGCCTGTGCTGATGCCATCCAGGGCACTGGGC...CACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCTGCTGTGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTCACAGCCCAGTGCCCTaGATGGCATCAGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: PAVVVPGNSKTQRGSPTFHSPVP*MASAQA
Trigger: AGCCTGTGCTGATGCCATCCAGGGCACTGGGCTGTG...AAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CAA 72 bp CATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTaGCTTCAGATGGCGCACCACAAGCACACGGCACTC +
Preference number: 4 (lower is better)
Translates to: HGGGQTRQNAGL*LQMAHHKHTAL
Trigger: GAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTGCTTCATTTCCCGATTaGATTGCCGCCGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: QSLSPSIQAWSFPGRAAAASFPD*IAAAQP
Trigger: GGGCTGAGCGGCGGCAATTCAATCGGGAAATGAAGC...AGCAGCGGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CCGGCAGGAACACATTTCCATCGCACACCCACCCATAGGGGCCACCAGTCGAGAGCTTCATTTCCCGATTaGATTGCCGCCGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: PAGTHFHRTPTHRGHQSRASFPD*IAAAQP
Trigger: GGGCTGAGCGGCGGCAATTCAATCGGGAAATGAAGC...TCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGATGGAAATGTGTTCCTGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp GTAGGGGGCATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTTGCTTCAGAAGACAGGGCGGACCTTaGGGACACGCTGCATGTACT +
Preference number: 4 (lower is better)
Translates to: VGGMVGDRHGRTLDSCFRRQGGP*GHAACT
Trigger: AGTACATGCAGCGTGTCCTCAAGGTCCGCCCTGTCT...TCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCATGCCCCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp ATCGCACACCCACCCATAGGGGCCACCAGTCGAGAAGCAAGCTGGGCACCAGGCGCTTGCCACACGCCATaGCGTATTCACTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: IAHPPIGATSREASWAPGACHTP*RIHSSG
Trigger: ACCAGAAGAGTGAATACGTCATGGCGTGTGGCAAGC...GCCTGGTGCCCAGCTTGCTTCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp GGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATGGCTGCCGATGTCTCCTGCTTaGCCATCTTGCTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: GAFQGEPLLHMCAVWPWLPMSPA*PSCCSH
Trigger: GTGAGAGCAGCAAGATGGTCAAGCAGGAGACATCGG...CAGCCATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CCTGCTGTGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTCCAGGCAGCTGCCTTTaGCATCCAGAGAAACCGCTG +
Preference number: 4 (lower is better)
Translates to: PAVVVPGNSKTQRGSPTFPGSCL*HPEKPL
Trigger: CAGCGGTTTCTCTGGATGTCAAAGGCAGCTGCCTGG...AAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACCAGGGCCAGCCTTTaGGCACACCCTGGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LGTARHSEAPQPLGEHMCTRASL*AHPGAS
Trigger: TGAGGCACCAGGGTGTGCTCAAAGGCTGGCCCTGGT...GCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp ATCGCACACCCACCCATAGGGGCCACCAGTCGAGAAGCAAGCTGGGCACCAGGCGTCTCTCTGAACGATTaGTTTAGCCGTGAACCCGCC +
Preference number: 4 (lower is better)
Translates to: IAHPPIGATSREASWAPGVSLND*FSREPA
Trigger: GGCGGGTTCACGGCTAAAGCAATCGTTCAGAGAGAC...GCCTGGTGCCCAGCTTGCTTCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GTAGGGGGCATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTTGCTTCAGACTCTCGGACTCCGCCTaGTTCCGCTTCATTTCCCGA +
Preference number: 4 (lower is better)
Translates to: VGGMVGDRHGRTLDSCFRLSDSA*FRFISR
Trigger: TCGGGAAATGAAGCGGAAGCAGGCGGAGTCCGAGAG...TCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCATGCCCCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGACAACAGCCCAGCCTTaGTGGTCAGCTCGTAGACCC +
Preference number: 4 (lower is better)
Translates to: PEARKGREGLSVQRGAFRTTAQP*WSARRP
Trigger: GGGTCTACGAGCTGACCAGCAAGGCTGGGCTGTTGT...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTGCTGCTCCACATGTGTaGTGTGTGGCCATGGCTGTC +
Preference number: 4 (lower is better)
Translates to: QSLSPSIQAWSFPGRAAAAAPHV*CVAMAV
Trigger: GACAGCCATGGCCACACAGCACACATGTGGAGCAGC...AGCAGCGGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCGGCAGGAACACATTTCCATCGCACACCCACCCATAGGGGCCACCAGTCGAGATCCAGGGAGAGCCGCTaGTCCACATGTGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: PAGTHFHRTPTHRGHQSRSRESR*STCVLC
Trigger: ACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGA...TCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGATGGAAATGTGTTCCTGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTTTGAGCACACCCTGGTaGCTCAGACTCCGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: QSLSPSIQAWSFPGRAAALSTPW*LRLRQE
Trigger: TTCCTGCCGGAGTCTGAGGCACCAGGGTGTGCTCAA...AGCAGCGGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCTGCTGTGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAAGCACACGGCACTCTaGACAGGTGCCAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: PAVVVPGNSKTQRGSPTFKHTAL*TGASPP
Trigger: TGGTGGACTGGCACCTGTGCAGAGTGCCGTGTGCTT...AAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGAAGCACACGGCACTCTaGACAGGTGCCAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: PEARKGREGLSVQRGAFRKHTAL*TGASPP
Trigger: TGGTGGACTGGCACCTGTGCAGAGTGCCGTGTGCTT...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp AGGCAGCTGCCTTTGACATCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATGCCGCGCTGTGCGCTaGCGGCTTAGTCAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RQLPLTSRETAVTGNSSGCRAVR*RLSQAG
Trigger: GCCAGCTTGACTAAGCCGCCAGCGCACAGCGCGGCA...TCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGATGTCAAAGGCAGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACTGCCGCGCTGTGCGCTaGCGGCTTAGTCAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHCRAVR*RLSQAG
Trigger: GCCAGCTTGACTAAGCCGCCAGCGCACAGCGCGGCA...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCTTGCAGGGGAGGTGGTaGAGACTGCTCACGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LGTARHSEAPQPLGEHMCLQGRW*RLLTGQ
Trigger: CTGCCCCGTGAGCAGTCTCCACCACCTCCCCTGCAA...GCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp AGAACGCTGGACTCTTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTGCACGTTTGCAGGGGAGGTaGTGGAGACTGCTCACGGGG +
Preference number: 4 (lower is better)
Translates to: RTLDSCFRWRTTSTRHSARLQGR*WRLLTG
Trigger: CCCCGTGAGCAGTCTCCACCACCTCCCCTGCAAACG...TGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GTAGGGGGCATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTTGCTTCAGAGGAGGCCTGACACTGTaGTGCACGATGCATGACTGC +
Preference number: 4 (lower is better)
Translates to: VGGMVGDRHGRTLDSCFRGGLTL*CTMHDC
Trigger: GCAGTCATGCATCGTGCACCACAGTGTCAGGCCTCC...TCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCATGCCCCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGAGTCGAGAAGCAAGCTaGGCACCAGGCAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: PEARKGREGLSVQRGAFRSREAS*APGSCL
Trigger: AAGGCAGCTGCCTGGTGCCCAGCTTGCTTCTCGACT...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCAGCTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGTCGAGAAGCAAGCTaGGCACCAGGCAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: PAATGAVAESIHSGLELSSREAS*APGSCL
Trigger: AAGGCAGCTGCCTGGTGCCCAGCTTGCTTCTCGACT...GGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCAGCTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCGGGAAGGATATGTTGTaGGCGGCCCACAGGCCAACA +
Preference number: 4 (lower is better)
Translates to: PAATGAVAESIHSGLELSGKDML*AAHRPT
Trigger: TGTTGGCCTGTGGGCCGCCCACAACATATCCTTCCC...GGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GTAGGGGGCATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTTGCTTCAGACAGCACCTGCTGTGGTaGTGCCTGGGAACAGCAAGA +
Preference number: 4 (lower is better)
Translates to: VGGMVGDRHGRTLDSCFRQHLLW*CLGTAR
Trigger: TCTTGCTGTTCCCAGGCACCACCACAGCAGGTGCTG...TCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCATGCCCCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAAGCTCCGTAGAAGTTaGAGGGGTCCTCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: LPLVQSLSPSIQAWSFPGKLRRS*RGPQQG
Trigger: TCCCTGCTGAGGACCCCTTCAACTTCTACGGAGCTT...CCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTTGTGGGTGCAGCAGCTaGAGGATCTTCTGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: QSLSPSIQAWSFPGRAAACGCSS*RIFCEA
Trigger: AGCCTCACAGAAGATCCTTCAGCTGCTGCACCCACA...AGCAGCGGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CCTGCTGTGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTGTGGTGCACGATGCATaGCTGCTGGTCTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: PAVVVPGNSKTQRGSPTFVVHDA*LLVSSE
Trigger: TTCTGAGGAGACCAGCAGTCATGCATCGTGCACCAC...AAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACCATGTGCACCTCCTaGCCAGGTCCCTGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: LGTARHSEAPQPLGEHMCTMCTS*PGPCSS
Trigger: GCTGCTACAGGGACCTGGTCAGGAGGTGCACATGGT...GCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGGTGAGGTCACTGCTTTaGTCCCGTTCCTCGTTGTCC +
Preference number: 4 (lower is better)
Translates to: PEARKGREGLSVQRGAFRVRSLL*SRSSLS
Trigger: GGACAACGAGGAACGGGAGCAAAGCAGTGACCTCAC...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGCGCTGCATGTACTCGTaGAGGATGCAGACCTCGGAT +
Preference number: 4 (lower is better)
Translates to: LPLVQSLSPSIQAWSFPGRCMYS*RMQTSD
Trigger: ATCCGAGGTCTGCATCCTGCACGAGTACATGCAGCG...CCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp AGGCAGCTGCCTTTGACATCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGACACCCGCGCACTGTGTaGTTGCCACACGCCATGACG +
Preference number: 4 (lower is better)
Translates to: RQLPLTSRETAVTGNSSGHPRTV*LPHAMT
Trigger: CGTCATGGCGTGTGGCAAGCACACAGTGCGCGGGTG...TCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGATGTCAAAGGCAGCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GTAGGGGGCATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTTGCTTCAGAGCAGGACGTCATCCTTaGTGGCATCGTGTCCAGACT +
Preference number: 4 (lower is better)
Translates to: VGGMVGDRHGRTLDSCFRAGRHP*WHRVQT
Trigger: AGTCTGGACACGATGCCAGCAAGGATGACGTCCTGC...TCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCATGCCCCCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGTTACCTCTGCACCACTaGACGTTTGCAGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: PEARKGREGLSVQRGAFRLPLHH*TFAGEV
Trigger: CACCTCCCCTGCAAACGTCCAGTGGTGCAGAGGTAA...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCTGCTGTGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTTTACCTCTGCACCACTaGACGTTTGCAGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: PAVVVPGNSKTQRGSPTFLPLHH*TFAGEV
Trigger: CACCTCCCCTGCAAACGTCCAGTGGTGCAGAGGTAA...AAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp ATCGCACACCCACCCATAGGGGCCACCAGTCGAGAAGCAAGCTGGGCACCAGGCCTGTTCGCCTCTTTTTaGGGGCACAAAGGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: IAHPPIGATSREASWAPGLFASF*GHKGLL
Trigger: AAGAAGGCCTTTGTGCCCCCAAAAAGAGGCGAACAG...GCCTGGTGCCCAGCTTGCTTCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCAGCTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCTCTCCATCGGACGGATaGTCGCTGTCTCCGCCATAT +
Preference number: 4 (lower is better)
Translates to: PAATGAVAESIHSGLELSSPSDG*SLSPPY
Trigger: ATATGGCGGAGACAGCGACCATCCGTCCGATGGAGA...GGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCAGCTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCGAGCTTCTGATTGGCTaGCAAGATGGGCCTCTCGGA +
Preference number: 4 (lower is better)
Translates to: PAATGAVAESIHSGLELSELLIG*QDGPLG
Trigger: TCCGAGAGGCCCATCTTGCCAGCCAATCAGAAGCTC...GGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACACAGCCCAGCCTTGCTaGTCAGCTCGTAGACCCGCG +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHTAQPC*SARRPA
Trigger: CGCGGGTCTACGAGCTGACCAGCAAGGCTGGGCTGT...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp AGAACGCTGGACTCTTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTGCACACAGGGAAGGAGCGTaGGTTGGAGGCCTGACACTG +
Preference number: 4 (lower is better)
Translates to: RTLDSCFRWRTTSTRHSAHREGA*VGGLTL
Trigger: CAGTGTCAGGCCTCCAACCCACGCTCCTTCCCTGTG...TGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GCTAAGGGCAACAGTCACAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCAGGCGCCCTGGGCACATaGGCCACCTGGCATCACGGG +
Preference number: 4 (lower is better)
Translates to: AKGNSHSQMTIHSCRQEAGALGT*ATWHHG
Trigger: CCCGTGATGCCAGGTGGCCCATGTGCCCAGGGCGCC...TGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCGGCAGGAACACATTTCCATCGCACACCCACCCATAGGGGCCACCAGTCGAGAGCATCGTGTCCAGACTaGAGAGGGACCACCTTGATG +
Preference number: 4 (lower is better)
Translates to: PAGTHFHRTPTHRGHQSRASCPD*RGTTLM
Trigger: CATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGC...TCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGATGGAAATGTGTTCCTGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp AGAACGCTGGACTCTTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTGCACCTTTGAGCACACCCTaGTGCCTCAGACTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: RTLDSCFRWRTTSTRHSAPLSTP*CLRLRQ
Trigger: CTGCCGGAGTCTGAGGCACCAGGGTGTGCTCAAAGG...TGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGGACACGGCAGAACGCTaGACTCTTGCTTCAGATGGC +
Preference number: 4 (lower is better)
Translates to: LPLVQSLSPSIQAWSFPGDTAER*TLASDG
Trigger: GCCATCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTC...CCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCGGCAGGAACACATTTCCATCGCACACCCACCCATAGGGGCCACCAGTCGAGAGTTCACAGGCGCATCTaGCTGGCTAAGGGCAACAGT +
Preference number: 4 (lower is better)
Translates to: PAGTHFHRTPTHRGHQSRVHRRI*LAKGNS
Trigger: ACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAAC...TCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGATGGAAATGTGTTCCTGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCGGCAGGAACACATTTCCATCGCACACCCACCCATAGGGGCCACCAGTCGAGAGAGACCACAAGAGTATaGCAGCACCTGCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PAGTHFHRTPTHRGHQSRETTRV*QHLLWW
Trigger: CCACCACAGCAGGTGCTGCCATACTCTTGTGGTCTC...TCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGATGGAAATGTGTTCCTGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp TTGGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGTCAAATGACTCTTTCTTCTTCTACCTaGGGCGCCCGCGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LVHRRIWLAKGNSHSQMTLSSST*GARGLP
Trigger: GGGCAGCCCGCGGGCGCCTCAGGTAGAAGAAGAAAG...AGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351989.8
ENST00000383024.6
CDS-3UTR TCA 90 bp TGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAAAGTTATGGAATGTCATaGTCCACCCGTCGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: WWCLGTARHSEAPQPLGESYGMS*STRRAA
Trigger: CGCTGCCCGACGGGTGGATCATGACATTCCATAACT...TTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp AGGCAGCTGCCTTTGACATCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGAATGGCCTGGACCAGGTaGCCACCCGAGACTCTCTGT +
Preference number: 4 (lower is better)
Translates to: RQLPLTSRETAVTGNSSGMAWTR*PPETLC
Trigger: ACAGAGAGTCTCGGGTGGTCACCTGGTCCAGGCCAT...TCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGATGTCAAAGGCAGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGGCTTGCCACACGCCATaGCGTATTCACTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LPLVQSLSPSIQAWSFPGACHTP*RIHSSG
Trigger: ACCAGAAGAGTGAATACGTCATGGCGTGTGGCAAGC...CCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCCCTCTTGGAGCTTGCTaGGGATGTGCAGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LGTARHSEAPQPLGEHMCPLGAC*GCAGWA
Trigger: AGCCCAACCTGCACATCCTCAGCAAGCTCCAAGAGG...GCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp AGAACGCTGGACTCTTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTGCACACTGGTGCAGTCGCTaGGTCCATCCATTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: RTLDSCFRWRTTSTRHSAHWCSR*VHPFRP
Trigger: AGGCCTGAATGGATGGACTCAGCGACTGCACCAGTG...TGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACTGGTGCAGTCGCTaGGTCCATCCATTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PGNSKTQRGSPTFRGTHVHWCSR*VHPFRP
Trigger: AGGCCTGAATGGATGGACTCAGCGACTGCACCAGTG...CACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GACAGTTTGCTTTATGTGTTCAGACAATCAAGGCTCGCCTTCCAGGCACAGCCCCGTCCTGCCGCGCTGTaGGCTGGCGGCTTAGTCAAG +
Preference number: 4 (lower is better)
Translates to: DSLLYVFRQSRLAFQAQPRPAAL*AGGLVK
Trigger: CTTGACTAAGCCGCCAGCGCACAGCGCGGCAGGACG...GGGCTGTGCCTGGAAGGCGAGCCTTGATTGTCTGAACACATAAAGCAAACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACGCACCACTGGACGTTTaGAGGGGAGGTGGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHAPLDV*RGGGGD
Trigger: GTCTCCACCACCTCCCCTGCAAACGTCCAGTGGTGC...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATAACGTCCATTACCTCTaGACCACTGGACGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: GLELSRESRCSTCVLCGHNVHYL*TTGRLQ
Trigger: CTGCAAACGTCCAGTGGTGCAGAGGTAATGGACGTT...ATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp AGAACGCTGGACTCTTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTGCACCAAAGGGACAAGCATaGACGTCCCCACTGACAGGG +
Preference number: 4 (lower is better)
Translates to: RTLDSCFRWRTTSTRHSAPKGQA*TSPLTG
Trigger: CCCTGTCAGTGGGGACGTGCATGCTTGTCCCTTTGG...TGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCTGCTGTGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTGTCTCTCTGAACGATTaGTTTAGCCGTGAACCCGCC +
Preference number: 4 (lower is better)
Translates to: PAVVVPGNSKTQRGSPTFVSLND*FSREPA
Trigger: GGCGGGTTCACGGCTAAAGCAATCGTTCAGAGAGAC...AAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCGGGAAACTCCAGCTCTaGAGATCGGCTCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: LGTARHSEAPQPLGEHMCGKLQL*RSAQGL
Trigger: AAGCCCCTGAGCCGATCTGCAGAGCTGGAGTTTCCC...GCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTATTTCCCGATTGAATTaGCGCCGCTCAGCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: QSLSPSIQAWSFPGRAAAISRLN*RRSAQV
Trigger: GACTTGGGCTGAGCGGCGGCAATTCAATCGGGAAAT...AGCAGCGGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCGGCAGGAACACATTTCCATCGCACACCCACCCATAGGGGCCACCAGTCGAGAATTTCCCGATTGAATTaGCGCCGCTCAGCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: PAGTHFHRTPTHRGHQSRISRLN*RRSAQV
Trigger: GACTTGGGCTGAGCGGCGGCAATTCAATCGGGAAAT...TCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGATGGAAATGTGTTCCTGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCAGCTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCACCTTGAGGACACGCTaGATGTACTCGTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: PAATGAVAESIHSGLELSTLRTR*MYSCRM
Trigger: CATCCTGCACGAGTACATGCAGCGTGTCCTCAAGGT...GGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp TCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTCTCACACGTCCACGGTaGACAGGGGCTCACCGCCAG +
Preference number: 4 (lower is better)
Translates to: SRETAVTGNSSGSRMGYTLTRPR*TGAHRQ
Trigger: CTGGCGGTGAGCCCCTGTGCACCGTGGACGTGTGAG...AGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTTGCACGATGCATGACTaGTGGTCTCCTCAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: QSLSPSIQAWSFPGRAAACTMHD*WSPQKC
Trigger: GCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCA...AGCAGCGGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGTGCACGATGCATGACTaGTGGTCTCCTCAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: LPLVQSLSPSIQAWSFPGCTMHD*WSPQKC
Trigger: GCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCA...CCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp AGAACGCTGGACTCTTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTGCAGAGTATGGCAGCACCTaGTGTGGTGGTGCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: RTLDSCFRWRTTSTRHSAEYGST*CGGAWE
Trigger: TTCCCAGGCACCACCACAGCAGGTGCTGCCATACTC...TGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATGGCTGGTCTTCATGCCGGAGTaGCACCTTTCTTCTTCTACC +
Preference number: 4 (lower is better)
Translates to: GAFQGEPLLHMCAVWPWLVFMPE*HLSSST
Trigger: GGTAGAAGAAGAAAGGTGCCACTCCGGCATGAAGAC...CAGCCATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351989.8
ENST00000383024.6
CDS-3UTR CCA 90 bp GGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATCCAGTTCTTGACATGTaGGTGCAGCAGCTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: GLELSRESRCSTCVLCGHPVLDM*VQQLKD
Trigger: ATCCTTCAGCTGCTGCACCCACATGTCAAGAACTGG...ATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATGGCTGTGTGCTGTGTGGCCATaGCTGTCCCTGTACACTAAA +
Preference number: 4 (lower is better)
Translates to: GAFQGEPLLHMCAVWPWLCAVWP*LSLYTK
Trigger: TTTAGTGTACAGGGACAGCCATGGCCACACAGCACA...CAGCCATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAAGCATCGTGTCCAGACTaGAGAGGGACCACCTTGATG +
Preference number: 4 (lower is better)
Translates to: WWCLGTARHSEAPQPLGEASCPD*RGTTLM
Trigger: CATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGC...TTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGATGTGCACGAAGCTTTaGTTCACAGGCGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: PEARKGREGLSVQRGAFRMCTKL*FTGASG
Trigger: GCCAGATGCGCCTGTGAACCAAAGCTTCGTGCACAT...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAAGAGACCACAAGAGTATaGCAGCACCTGCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: WWCLGTARHSEAPQPLGEETTRV*QHLLWW
Trigger: CCACCACAGCAGGTGCTGCCATACTCTTGTGGTCTC...TTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACGCTTCATTTCCCGATTaGATTGCCGCCGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHASFPD*IAAAQP
Trigger: GGGCTGAGCGGCGGCAATTCAATCGGGAAATGAAGC...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACCCTCTTGGAGCTTGCTaGGGATGTGCAGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHPLGAC*GCAGWA
Trigger: AGCCCAACCTGCACATCCTCAGCAAGCTCCAAGAGG...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CCGGCAGGAACACATTTCCATCGCACACCCACCCATAGGGGCCACCAGTCGAGAAAGAATGGGCTACACTaGAGGCCCTTGCTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: PAGTHFHRTPTHRGHQSRKNGLH*RPLLPV
Trigger: AACAGGAAGCAAGGGCCTTCAGTGTAGCCCATTCTT...TCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGATGGAAATGTGTTCCTGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCAGCTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCTCTACACAGCTAACATaGACAAGTCCGCTGAGACCC +
Preference number: 4 (lower is better)
Translates to: PAATGAVAESIHSGLELSSTQLT*TSPLRP
Trigger: GGGTCTCAGCGGACTTGTGCATGTTAGCTGTGTAGA...GGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCGGCAGGAACACATTTCCATCGCACACCCACCCATAGGGGCCACCAGTCGAGAAACGTCCATTACCTCTaGACCACTGGACGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: PAGTHFHRTPTHRGHQSRNVHYL*TTGRLQ
Trigger: CTGCAAACGTCCAGTGGTGCAGAGGTAATGGACGTT...TCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGATGGAAATGTGTTCCTGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACCCAAAGGGACAAGCATaGACGTCCCCACTGACAGGG +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHPKGQA*TSPLTG
Trigger: CCCTGTCAGTGGGGACGTGCATGCTTGTCCCTTTGG...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACCACTCTCACCCCCTATaGCTACCCCGTCACCAACAC +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHHSHPL*LPRHQH
Trigger: GTGTTGGTGACGGGGTAGGCATAGGGGGTGAGAGTG...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCTGCTGTGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTGGTCGTGTTTCCGTATaGTTCCCGTTCCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: PAVVVPGNSKTQRGSPTFGRVSV*FPFPRS
Trigger: ACTTCTTGGGAACGGGAAGCATACGGAAACACGACC...AAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGGGTCGTGTTTCCGTATaGTTCCCGTTCCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: LPLVQSLSPSIQAWSFPGGRVSV*FPFPRS
Trigger: ACTTCTTGGGAACGGGAAGCATACGGAAACACGACC...CCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAATGCAGACAAGGGATaGTACTCAGAGGAGGGTCGT +
Preference number: 4 (lower is better)
Translates to: LPLVQSLSPSIQAWSFPGNADKG*YSEEGR
Trigger: ACGACCCTCCTCTGAGTAGCATCCCTTGTCTGCATT...CCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CTGGCATCGTGTCCAGACTGGAGAGGGACCACCTTGATGGTTTGCCTCCAATCCGTGAGGTCACTGCTTTaGTCCCGTTCCTCGTTGTCC +
Preference number: 4 (lower is better)
Translates to: LASCPDWRGTTLMVCLQSVRSLL*SRSSLS
Trigger: GGACAACGAGGAACGGGAGCAAAGCAGTGACCTCAC...GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAGGCCTCTCGGACTCCGCCTaGTTCCGCTTCATTTCCCGA +
Preference number: 4 (lower is better)
Translates to: EAPQPLGEHMCTKLWFTGLSDSA*FRFISR
Trigger: TCGGGAAATGAAGCGGAAGCAGGCGGAGTCCGAGAG...GCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp AGGCAGCTGCCTTTGACATCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGACTCTCGGACTCCGCCTaGTTCCGCTTCATTTCCCGA +
Preference number: 4 (lower is better)
Translates to: RQLPLTSRETAVTGNSSGLSDSA*FRFISR
Trigger: TCGGGAAATGAAGCGGAAGCAGGCGGAGTCCGAGAG...TCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGATGTCAAAGGCAGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp ATCGCACACCCACCCATAGGGGCCACCAGTCGAGAAGCAAGCTGGGCACCAGGCTTCTTCTTGGCATACTaGTGCAGCTCAATCACACTC +
Preference number: 4 (lower is better)
Translates to: IAHPPIGATSREASWAPGFFLAY*CSSITL
Trigger: GAGTGTGATTGAGCTGCAGCAGTATGCCAAGAAGAA...GCCTGGTGCCCAGCTTGCTTCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CTGGCATCGTGTCCAGACTGGAGAGGGACCACCTTGATGGTTTGCCTCCAATCCCACTGTGGTGCACGATaGATGACTGCTGGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LASCPDWRGTTLMVCLQSHCGAR*MTAGLL
Trigger: GAGGAGACCAGCAGTCATGCATCGTGCACCACAGTG...GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACCACGATTCATACCCATaGTTGGCAGACGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHHDSYP*LADGWG
Trigger: CCCCCACCCGTCTGCCAAGCATGGGTATGAATCGTG...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAGGCCACGATTCATACCCATaGTTGGCAGACGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: EAPQPLGEHMCTKLWFTGHDSYP*LADGWG
Trigger: CCCCCACCCGTCTGCCAAGCATGGGTATGAATCGTG...GCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCGGCAGGAACACATTTCCATCGCACACCCACCCATAGGGGCCACCAGTCGAGAGTCTTCATGCCGGAGTaGCACCTTTCTTCTTCTACC +
Preference number: 4 (lower is better)
Translates to: PAGTHFHRTPTHRGHQSRVFMPE*HLSSST
Trigger: GGTAGAAGAAGAAAGGTGCCACTCCGGCATGAAGAC...TCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGATGGAAATGTGTTCCTGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351989.8
ENST00000383024.6
CDS-3UTR CCA 90 bp CAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCAAGACAGAAGCAAGTGTCTCACGGGGCAGCGCTTaGAAGGGGCGAGCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: QSNDYSQLQTGGKTEASVSRGSA*KGRARL
Trigger: GAGCCGAGCTCGCCCCTTCCAAGCGCTGCCCCGTGA...GACACTTGCTTCTGTCTTGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTCGTTTGCAGGGGAGGTaGTGGAGACTGCTCACGGGG +
Preference number: 4 (lower is better)
Translates to: SRETAVTGNSSGSRMGYTRLQGR*WRLLTG
Trigger: CCCCGTGAGCAGTCTCCACCACCTCCCCTGCAAACG...AGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCTTACCTCTGCACCACTaGACGTTTGCAGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LGTARHSEAPQPLGEHMCLPLHH*TFAGEV
Trigger: CACCTCCCCTGCAAACGTCCAGTGGTGCAGAGGTAA...GCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GCTAAGGGCAACAGTCACAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCAGCGGTGCGCGGGCTGTaGCCACTACAGTTCGGGTCT +
Preference number: 4 (lower is better)
Translates to: AKGNSHSQMTIHSCRQEAAVRGL*PLQFGS
Trigger: AGACCCGAACTGTAGTGGCCACAGCCCGCGCACCGC...TGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CTGGCATCGTGTCCAGACTGGAGAGGGACCACCTTGATGGTTTGCCTCCAATCCTCTCCATCGGACGGATaGTCGCTGTCTCCGCCATAT +
Preference number: 4 (lower is better)
Translates to: LASCPDWRGTTLMVCLQSSPSDG*SLSPPY
Trigger: ATATGGCGGAGACAGCGACCATCCGTCCGATGGAGA...GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGGGGACTCCAGAGTTATaGAATGTCATGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: PEARKGREGLSVQRGAFRGTPEL*NVMIHP
Trigger: CGGGTGGATCATGACATTCCATAACTCTGGAGTCCC...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGGAGCTTCTGATTGGCTaGCAAGATGGGCCTCTCGGA +
Preference number: 4 (lower is better)
Translates to: PGNSKTQRGSPTFRGTHVELLIG*QDGPLG
Trigger: TCCGAGAGGCCCATCTTGCCAGCCAATCAGAAGCTC...CACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GCCCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATACCAAAAGGCTCACTTaGGTTCTCACATTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: ALGTWATWHHGPATGLSHTKRLT*VLTFKE
Trigger: TTCTTTGAATGTGAGAACCCAAGTGAGCCTTTTGGT...ATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351989.8
CDS-3UTR CCA 90 bp AGAACGCTGGACTCTTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTGCAGGGCGGACGCCACAATaGACATCTTGGGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: RTLDSCFRWRTTSTRHSAGRTPQ*TSWASF
Trigger: GAAAGAAGCCCAAGATGTCCATTGTGGCGTCCGCCC...TGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACGGAGGCCTGACACTGTaGTGCACGATGCATGACTGC +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHGGLTL*CTMHDC
Trigger: GCAGTCATGCATCGTGCACCACAGTGTCAGGCCTCC...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTTGTGCTGTGTGGCCATaGCTGTCCCTGTACACTAAA +
Preference number: 4 (lower is better)
Translates to: QSLSPSIQAWSFPGRAAACAVWP*LSLYTK
Trigger: TTTAGTGTACAGGGACAGCCATGGCCACACAGCACA...AGCAGCGGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGGCATCGTGTCCAGACTaGAGAGGGACCACCTTGATG +
Preference number: 4 (lower is better)
Translates to: PGNSKTQRGSPTFRGTHVASCPD*RGTTLM
Trigger: CATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGC...CACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGGCTCTGGATCAAGAATaGGCTACACTGAAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: PEARKGREGLSVQRGAFRALDQE*ATLKAL
Trigger: AAGGGCCTTCAGTGTAGCCCATTCTTGATCCAGAGC...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GTAGGGGGCATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTTGCTTCAGACACAGGCAACAGCTCTaGATCAAGAATGGGCTACAC +
Preference number: 4 (lower is better)
Translates to: VGGMVGDRHGRTLDSCFRHRQQL*IKNGLH
Trigger: GTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTG...TCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCATGCCCCCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAGTCGAGAAGCAAGCTaGGCACCAGGCAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHSREAS*APGSCL
Trigger: AAGGCAGCTGCCTGGTGCCCAGCTTGCTTCTCGACT...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CTGGCATCGTGTCCAGACTGGAGAGGGACCACCTTGATGGTTTGCCTCCAATCCGACACGGCAGAACGCTaGACTCTTGCTTCAGATGGC +
Preference number: 4 (lower is better)
Translates to: LASCPDWRGTTLMVCLQSDTAER*TLASDG
Trigger: GCCATCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTC...GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACGGGAAGGATATGTTGTaGGCGGCCCACAGGCCAACA +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHGKDML*AAHRPT
Trigger: TGTTGGCCTGTGGGCCGCCCACAACATATCCTTCCC...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp AGAACGCTGGACTCTTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTGCATGCACTCAGCTTAAGTaGCTGGCGACTAAGCGAGTC +
Preference number: 4 (lower is better)
Translates to: RTLDSCFRWRTTSTRHSACTQLK*LATKRV
Trigger: GACTCGCTTAGTCGCCAGTCACTTAAGCTGAGTGCA...TGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351989.8
ENST00000383024.6
CDS-3UTR TCA 90 bp AGAACGCTGGACTCTTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTGCACACTCGTGGAGGATCTaGTATGGAGACAACAGCCCA +
Preference number: 4 (lower is better)
Translates to: RTLDSCFRWRTTSTRHSAHSWRI*YGDNSP
Trigger: TGGGCTGTTGTCTCCATATCAGATCCTCCACGAGTG...TGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACTGTGGGTGCAGCAGCTaGAGGATCTTCTGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHCGCSS*RIFCEA
Trigger: AGCCTCACAGAAGATCCTTCAGCTGCTGCACCCACA...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CTGGCATCGTGTCCAGACTGGAGAGGGACCACCTTGATGGTTTGCCTCCAATCCGCGAGTCTGTCTTCATaGCGGAGTGGCACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LASCPDWRGTTLMVCLQSASLSS*RSGTFL
Trigger: AAGAAAGGTGCCACTCCGGCATGAAGACAGACTCGC...GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351989.8
ENST00000383024.6
CDS-3UTR GCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACCGCTGCATGTACTCGTaGAGGATGCAGACCTCGGAT +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHRCMYS*RMQTSD
Trigger: ATCCGAGGTCTGCATCCTGCACGAGTACATGCAGCG...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CTGGCATCGTGTCCAGACTGGAGAGGGACCACCTTGATGGTTTGCCTCCAATCCTCTCACGGCCATACATaGGCAGTAAAGACCCCCAGT +
Preference number: 4 (lower is better)
Translates to: LASCPDWRGTTLMVCLQSSHGHT*AVKTPS
Trigger: ACTGGGGGTCTTTACTGCGCATGTATGGCCGTGAGA...GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATGGCTGTTCTTGGCATACTGCTaGAGCTCAATCACACTCTTG +
Preference number: 4 (lower is better)
Translates to: GAFQGEPLLHMCAVWPWLFLAYC*SSITLL
Trigger: CAAGAGTGTGATTGAGCTGCAGCAGTATGCCAAGAA...CAGCCATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAGGCCACTGTGGTGCACGATaGATGACTGCTGGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: EAPQPLGEHMCTKLWFTGHCGAR*MTAGLL
Trigger: GAGGAGACCAGCAGTCATGCATCGTGCACCACAGTG...GCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCAGCTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCACCACCTTGATGGTTTaGCTCCAATCCCAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: PAATGAVAESIHSGLELSTTLMV*LQSQKA
Trigger: AGCTTTCTGGGATTGGAGGCAAACCATCAAGGTGGT...GGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp AGGCAGCTGCCTTTGACATCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGAGCAGGACGTCATCCTTaGTGGCATCGTGTCCAGACT +
Preference number: 4 (lower is better)
Translates to: RQLPLTSRETAVTGNSSGAGRHP*WHRVQT
Trigger: AGTCTGGACACGATGCCAGCAAGGATGACGTCCTGC...TCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGATGTCAAAGGCAGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGAGAACGCTGGACTCTTaGTTCAGATGGCGCACCACA +
Preference number: 4 (lower is better)
Translates to: PGNSKTQRGSPTFRGTHVRTLDS*FRWRTT
Trigger: TGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT...CACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTTGCACACCTCGACTTTaGCCTTCACCTGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SRETAVTGNSSGSRMGYTCTPRL*PSPAPG
Trigger: CCCTGGGGCAGGTGAAGGCCAAAGTCGAGGTGTGCA...AGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp AGGCAGCTGCCTTTGACATCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGAGAGCTTCTGATTGGCTaGCAAGATGGGCCTCTCGGA +
Preference number: 4 (lower is better)
Translates to: RQLPLTSRETAVTGNSSGELLIG*QDGPLG
Trigger: TCCGAGAGGCCCATCTTGCCAGCCAATCAGAAGCTC...TCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGATGTCAAAGGCAGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGTGGGCTTGTTCTTCTTaGCATACTGCTGCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: PEARKGREGLSVQRGAFRWACSS*HTAAAQ
Trigger: TTGAGCTGCAGCAGTATGCCAAGAAGAACAAGCCCA...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCTGCTGTGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTCCACAATGGACATCTTaGGCTTCTTTCGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PAVVVPGNSKTQRGSPTFPQWTS*ASFESP
Trigger: AGGAGACTCGAAAGAAGCCCAAGATGTCCATTGTGG...AAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp AGGCAGCTGCCTTTGACATCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGAGGACGTCATCCTTGCTaGCATCGTGTCCAGACTGGA +
Preference number: 4 (lower is better)
Translates to: RQLPLTSRETAVTGNSSGGRHPC*HRVQTG
Trigger: TCCAGTCTGGACACGATGCCAGCAAGGATGACGTCC...TCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGATGTCAAAGGCAGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACGGACGTCATCCTTGCTaGCATCGTGTCCAGACTGGA +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHGRHPC*HRVQTG
Trigger: TCCAGTCTGGACACGATGCCAGCAAGGATGACGTCC...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAGGCGGTAACTCCAGGAGGTaGCAGGACGTCATCCTTGCT +
Preference number: 4 (lower is better)
Translates to: EAPQPLGEHMCTKLWFTGGNSRR*QDVILA
Trigger: AGCAAGGATGACGTCCTGCCACCTCCTGGAGTTACC...GCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp AGGCAGCTGCCTTTGACATCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGAGGTAACTCCAGGAGGTaGCAGGACGTCATCCTTGCT +
Preference number: 4 (lower is better)
Translates to: RQLPLTSRETAVTGNSSGGNSRR*QDVILA
Trigger: AGCAAGGATGACGTCCTGCCACCTCCTGGAGTTACC...TCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGATGTCAAAGGCAGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GCCCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATAGCTTTAAAAATCAATaGGTGGACATATGGACTCGA +
Preference number: 4 (lower is better)
Translates to: ALGTWATWHHGPATGLSHSFKNQ*VDIWTR
Trigger: TCGAGTCCATATGTCCACCCATTGATTTTTAAAGCT...ATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAAGCTCTGGATCAAGAATaGGCTACACTGAAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: WWCLGTARHSEAPQPLGEALDQE*ATLKAL
Trigger: AAGGGCCTTCAGTGTAGCCCATTCTTGATCCAGAGC...TTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACGACTCTTGCTTCAGATaGCGCACCACAAGCACACGG +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHDSCFR*RTTSTR
Trigger: CCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTC...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACACAGGCGCATCTGGCTaGCTAAGGGCAACAGTCACA +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHTGASG*LRATVT
Trigger: TGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGT...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGATGTGCACGAAGCTTTaGTTCACAGGCGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: PGNSKTQRGSPTFRGTHVMCTKL*FTGASG
Trigger: GCCAGATGCGCCTGTGAACCAAAGCTTCGTGCACAT...CACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTCACAGCCCAGTGCCCTaGATGGCATCAGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: SRETAVTGNSSGSRMGYTHSPVP*MASAQA
Trigger: AGCCTGTGCTGATGCCATCCAGGGCACTGGGCTGTG...AGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CAA 72 bp TCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTaGGTTCACAGGCGCATCTGGCTGGCTAAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: SPTFRGTHVHEA*VHRRIWLAKGN
Trigger: GTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp GACAGTTTGCTTTATGTGTTCAGACAATCAAGGCTCGCCTTCCAGGCACAGCCCCCTCTTGGAGCTTGCTaGGGATGTGCAGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: DSLLYVFRQSRLAFQAQPPLGAC*GCAGWA
Trigger: AGCCCAACCTGCACATCCTCAGCAAGCTCCAAGAGG...GGGCTGTGCCTGGAAGGCGAGCCTTGATTGTCTGAACACATAAAGCAAACTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp GACAGTTTGCTTTATGTGTTCAGACAATCAAGGCTCGCCTTCCAGGCACAGCCCCACTGGTGCAGTCGCTaGGTCCATCCATTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: DSLLYVFRQSRLAFQAQPHWCSR*VHPFRP
Trigger: AGGCCTGAATGGATGGACTCAGCGACTGCACCAGTG...GGGCTGTGCCTGGAAGGCGAGCCTTGATTGTCTGAACACATAAAGCAAACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CCTGCTGTGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTACAGTCACAGTCAAATaGCTATTCACAGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: PAVVVPGNSKTQRGSPTFTVTVK*LFTAAD
Trigger: GTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGT...AAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGACAGTCACAGTCAAATaGCTATTCACAGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: PEARKGREGLSVQRGAFRTVTVK*LFTAAD
Trigger: GTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGT...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp AGAACGCTGGACTCTTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTGCAAACGTCCATTACCTCTaGACCACTGGACGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: RTLDSCFRWRTTSTRHSANVHYL*TTGRLQ
Trigger: CTGCAAACGTCCAGTGGTGCAGAGGTAATGGACGTT...TGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CTCTCATCTGTCATCCAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAAGTGCGTGCCGGGCGGTaGGCGGGCTGTGGCCACTAC +
Preference number: 4 (lower is better)
Translates to: LSSVIQASCVVSAYYILKVRAGR*AGCGHY
Trigger: GTAGTGGCCACAGCCCGCGCACCGCCCGGCACGCAC...TTTTAGTATGTAATACGCACTGACGACACATGATGCTTGGATGACAGATGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GACAGTTTGCTTTATGTGTTCAGACAATCAAGGCTCGCCTTCCAGGCACAGCCCCACTCTCACCCCCTATaGCTACCCCGTCACCAACAC +
Preference number: 4 (lower is better)
Translates to: DSLLYVFRQSRLAFQAQPHSHPL*LPRHQH
Trigger: GTGTTGGTGACGGGGTAGGCATAGGGGGTGAGAGTG...GGGCTGTGCCTGGAAGGCGAGCCTTGATTGTCTGAACACATAAAGCAAACTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CTGGCATCGTGTCCAGACTGGAGAGGGACCACCTTGATGGTTTGCCTCCAATCCTTGGTCATCATCGGCTaGACACTTGTCTCTCCATCG +
Preference number: 4 (lower is better)
Translates to: LASCPDWRGTTLMVCLQSLVIIG*TLVSPS
Trigger: CGATGGAGAGACAAGTGTGCAGCCGATGATGACCAA...GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GCCCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATTTTTTCACAGTAACTTaGTCAAAGTCAAAACGCTTC +
Preference number: 4 (lower is better)
Translates to: ALGTWATWHHGPATGLSHFFTVT*SKSKRF
Trigger: GAAGCGTTTTGACTTTGAGCAAGTTACTGTGAAAAA...ATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGGGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAGGCATTTCCCGATTGAATTaGCGCCGCTCAGCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: EAPQPLGEHMCTKLWFTGISRLN*RRSAQV
Trigger: GACTTGGGCTGAGCGGCGGCAATTCAATCGGGAAAT...GCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTTTCTTGGCATACTGCTaGAGCTCAATCACACTCTTG +
Preference number: 4 (lower is better)
Translates to: QSLSPSIQAWSFPGRAAAFLAYC*SSITLL
Trigger: CAAGAGTGTGATTGAGCTGCAGCAGTATGCCAAGAA...AGCAGCGGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCAGCTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCTTCTTGGCATACTGCTaGAGCTCAATCACACTCTTG +
Preference number: 4 (lower is better)
Translates to: PAATGAVAESIHSGLELSFLAYC*SSITLL
Trigger: CAAGAGTGTGATTGAGCTGCAGCAGTATGCCAAGAA...GGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp AGAACGCTGGACTCTTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTGCAAGCTTGCTGAGGATGTaGAGGTTGGGCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: RTLDSCFRWRTTSTRHSASLLRM*RLGLFF
Trigger: GAAGAACAAGCCCAACCTGCACATCCTCAGCAAGCT...TGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp TCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTTCCAGGGAGAGCCGCTaGTCCACATGTGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SRETAVTGNSSGSRMGYTSRESR*STCVLC
Trigger: ACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGA...AGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCGGCAGGAACACATTTCCATCGCACACCCACCCATAGGGGCCACCAGTCGAGATTCATAAAAAGAGCCTaGAGCAGGTGCACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: PAGTHFHRTPTHRGHQSRFIKRA*SRCTEA
Trigger: TGCTTCTGTGCACCTGCTGCAGGCTCTTTTTATGAA...TCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGATGGAAATGTGTTCCTGCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAGAACGCTGGACTCTTaGTTCAGATGGCGCACCACA +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHRTLDS*FRWRTT
Trigger: TGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCTGCTGTGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTTTAGGGGAACACATGTaGACGAAGCTTTGGTTCACA +
Preference number: 4 (lower is better)
Translates to: PAVVVPGNSKTQRGSPTFLGEHM*TKLWFT
Trigger: TGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAA...AAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCAGCTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCTTAGGGGAACACATGTaGACGAAGCTTTGGTTCACA +
Preference number: 4 (lower is better)
Translates to: PAATGAVAESIHSGLELSLGEHM*TKLWFT
Trigger: TGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAA...GGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp TCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTCACCTGCTGTGGTGGTaGCTGGGAACAGCAAGACAC +
Preference number: 4 (lower is better)
Translates to: SRETAVTGNSSGSRMGYTHLLWW*LGTARH
Trigger: GTGTCTTGCTGTTCCCAGGCACCACCACAGCAGGTG...AGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCCTGTTCGCCTCTTTTTaGGGGCACAAAGGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LGTARHSEAPQPLGEHMCLFASF*GHKGLL
Trigger: AAGAAGGCCTTTGTGCCCCCAAAAAGAGGCGAACAG...GCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GCTAAGGGCAACAGTCACAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCAGATTGGCTGGCAAGATaGGCCTCTCGGACTCCGCCT +
Preference number: 4 (lower is better)
Translates to: AKGNSHSQMTIHSCRQEADWLAR*ASRTPP
Trigger: AGGCGGAGTCCGAGAGGCCCATCTTGCCAGCCAATC...TGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp AGAACGCTGGACTCTTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTGCACCAGTTCTTGACATGTaGGTGCAGCAGCTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: RTLDSCFRWRTTSTRHSAPVLDM*VQQLKD
Trigger: ATCCTTCAGCTGCTGCACCCACATGTCAAGAACTGG...TGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTCCATCCATTCAGGCCTaGAGCTTTCCAGGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: SRETAVTGNSSGSRMGYTPSIQA*SFPGRA
Trigger: GGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGG...AGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CTGGCATCGTGTCCAGACTGGAGAGGGACCACCTTGATGGTTTGCCTCCAATCCCACAGGCAACAGCTCTaGATCAAGAATGGGCTACAC +
Preference number: 4 (lower is better)
Translates to: LASCPDWRGTTLMVCLQSHRQQL*IKNGLH
Trigger: GTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTG...GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACAGGCAACAGCTCTaGATCAAGAATGGGCTACAC +
Preference number: 4 (lower is better)
Translates to: PGNSKTQRGSPTFRGTHVHRQQL*IKNGLH
Trigger: GTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTG...CACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GACAGTTTGCTTTATGTGTTCAGACAATCAAGGCTCGCCTTCCAGGCACAGCCCGGGAAGGATATGTTGTaGGCGGCCCACAGGCCAACA +
Preference number: 4 (lower is better)
Translates to: DSLLYVFRQSRLAFQAQPGKDML*AAHRPT
Trigger: TGTTGGCCTGTGGGCCGCCCACAACATATCCTTCCC...GGGCTGTGCCTGGAAGGCGAGCCTTGATTGTCTGAACACATAAAGCAAACTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTCAGCACCTGCTGTGGTaGTGCCTGGGAACAGCAAGA +
Preference number: 4 (lower is better)
Translates to: SRETAVTGNSSGSRMGYTQHLLW*CLGTAR
Trigger: TCTTGCTGTTCCCAGGCACCACCACAGCAGGTGCTG...AGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TTGGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGTCAAATGACTCAGCACCTGCTGTGGTaGTGCCTGGGAACAGCAAGA +
Preference number: 4 (lower is better)
Translates to: LVHRRIWLAKGNSHSQMTQHLLW*CLGTAR
Trigger: TCTTGCTGTTCCCAGGCACCACCACAGCAGGTGCTG...AGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp GAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAGGCTCCACTCTGTCTCTCTaGACGATTGCTTTAGCCGTG +
Preference number: 4 (lower is better)
Translates to: EAPQPLGEHMCTKLWFTGSTLSL*TIALAV
Trigger: CACGGCTAAAGCAATCGTTCAGAGAGACAGAGTGGA...GCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCAAGACAGAAGCAAGTGTCACCATGTGCACCTCCTaGCCAGGTCCCTGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: QSNDYSQLQTGGKTEASVTMCTS*PGPCSS
Trigger: GCTGCTACAGGGACCTGGTCAGGAGGTGCACATGGT...GACACTTGCTTCTGTCTTGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCAAGACAGAAGCAAGTGTCGCACCACTGGACGTTTaGAGGGGAGGTGGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: QSNDYSQLQTGGKTEASVAPLDV*RGGGGD
Trigger: GTCTCCACCACCTCCCCTGCAAACGTCCAGTGGTGC...GACACTTGCTTCTGTCTTGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAATGCAGACAAGGGATaGTACTCAGAGGAGGGTCGT +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHNADKG*YSEEGR
Trigger: ACGACCCTCCTCTGAGTAGCATCCCTTGTCTGCATT...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp TCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTGTGAGGTCACTGCTTTaGTCCCGTTCCTCGTTGTCC +
Preference number: 4 (lower is better)
Translates to: SRETAVTGNSSGSRMGYTVRSLL*SRSSLS
Trigger: GGACAACGAGGAACGGGAGCAAAGCAGTGACCTCAC...AGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGTTCTGTGAGGCTAACTaGTTTCCAACTCTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LPLVQSLSPSIQAWSFPGFCEAN*FPTLLF
Trigger: GAACAAGAGAGTTGGAAAGCAGTTAGCCTCACAGAA...CCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCTGCTGTGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTTTCTGTGAGGCTAACTaGTTTCCAACTCTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: PAVVVPGNSKTQRGSPTFFCEAN*FPTLLF
Trigger: GAACAAGAGAGTTGGAAAGCAGTTAGCCTCACAGAA...AAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp TGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAATTCTTCTTGGCATACTaGTGCAGCTCAATCACACTC +
Preference number: 4 (lower is better)
Translates to: WWCLGTARHSEAPQPLGEFFLAY*CSSITL
Trigger: GAGTGTGATTGAGCTGCAGCAGTATGCCAAGAAGAA...TTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAATTCATGAAAGCCTTCCCGCGCCCTGGCCCGTaGCACCTCCCTCACACGTCC +
Preference number: 4 (lower is better)
Translates to: QASCVVSAYYILKFMKAFPRPGP*HLPHTS
Trigger: GGACGTGTGAGGGAGGTGGCACGGGCCAGGGCGCGG...GAAGGCTTTCATGAATTTTAGTATGTAATACGCACTGACGACACATGATGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GCTAAGGGCAACAGTCACAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCAGCTGCTCCACATGTGTaGTGTGTGGCCATGGCTGTC +
Preference number: 4 (lower is better)
Translates to: AKGNSHSQMTIHSCRQEAAAPHV*CVAMAV
Trigger: GACAGCCATGGCCACACAGCACACATGTGGAGCAGC...TGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CTGGCATCGTGTCCAGACTGGAGAGGGACCACCTTGATGGTTTGCCTCCAATCCACCACCTTGATGGTTTaGCTCCAATCCCAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: LASCPDWRGTTLMVCLQSTTLMV*LQSQKA
Trigger: AGCTTTCTGGGATTGGAGGCAAACCATCAAGGTGGT...GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp ATCGCACACCCACCCATAGGGGCCACCAGTCGAGAAGCAAGCTGGGCACCAGGCGTCCACTTGCTAAAATaGATGATTCCAAATCTACCT +
Preference number: 4 (lower is better)
Translates to: IAHPPIGATSREASWAPGVHLLK*MIPNLP
Trigger: AGGTAGATTTGGAATCATGCATTTTAGCAAGTGGAC...GCCTGGTGCCCAGCTTGCTTCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GCTAAGGGCAACAGTCACAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCATTGAGCACACCCTGGTaGCTCAGACTCCGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: AKGNSHSQMTIHSCRQEALSTPW*LRLRQE
Trigger: TTCCTGCCGGAGTCTGAGGCACCAGGGTGTGCTCAA...TGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp AGAACGCTGGACTCTTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTGCAAAGTCACACCATCAATaGTCACCGAGGCACCAAAAG +
Preference number: 4 (lower is better)
Translates to: RTLDSCFRWRTTSTRHSAKSHHQ*SPRHQK
Trigger: CTTTTGGTGCCTCGGTGACCATTGATGGTGTGACTT...TGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351989.8
CDS-3UTR CCA 90 bp CCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCCACAATGGACATCTTaGGCTTCTTTCGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PGNSKTQRGSPTFRGTHVPQWTS*ASFESP
Trigger: AGGAGACTCGAAAGAAGCCCAAGATGTCCATTGTGG...CACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GACAGTTTGCTTTATGTGTTCAGACAATCAAGGCTCGCCTTCCAGGCACAGCCCGGGCGGACGCCACAATaGACATCTTGGGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: DSLLYVFRQSRLAFQAQPGRTPQ*TSWASF
Trigger: GAAAGAAGCCCAAGATGTCCATTGTGGCGTCCGCCC...GGGCTGTGCCTGGAAGGCGAGCCTTGATTGTCTGAACACATAAAGCAAACTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TTGGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGTCAAATGACTACGATGCATGACTGCTaGTCTCCTCAGAAGTGCGGC +
Preference number: 4 (lower is better)
Translates to: LVHRRIWLAKGNSHSQMTTMHDC*SPQKCG
Trigger: GCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGT...AGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TTGGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGTCAAATGACTGACTCTTGCTTCAGATaGCGCACCACAAGCACACGG +
Preference number: 4 (lower is better)
Translates to: LVHRRIWLAKGNSHSQMTDSCFR*RTTSTR
Trigger: CCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTC...AGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TTGGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGTCAAATGACTGACACGGCAGAACGCTaGACTCTTGCTTCAGATGGC +
Preference number: 4 (lower is better)
Translates to: LVHRRIWLAKGNSHSQMTDTAER*TLASDG
Trigger: GCCATCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTC...AGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTACAGGCGCATCTGGCTaGCTAAGGGCAACAGTCACA +
Preference number: 4 (lower is better)
Translates to: SRETAVTGNSSGSRMGYTTGASG*LRATVT
Trigger: TGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGT...AGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TTGGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGTCAAATGACTGTTCACAGGCGCATCTaGCTGGCTAAGGGCAACAGT +
Preference number: 4 (lower is better)
Translates to: LVHRRIWLAKGNSHSQMTVHRRI*LAKGNS
Trigger: ACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAAC...AGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CAA 72 bp TTGCTGGCATCGTGTCCAGACTGGAGAGGGACCACCTaGATGGTTTGCCTCCAATCCCAGAAAGCTAGTTCT +
Preference number: 4 (lower is better)
Translates to: LLASCPDWRGTT*MVCLQSQKASS
Trigger: AGAACTAGCTTTCTGGGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAAAGTAATGAGCTTCTaGTTGGCTGGCAAGATGGGC +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHKVMSF*LAGKMG
Trigger: GCCCATCTTGCCAGCCAATCAGAAGCTCATTACTTT...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp GAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAGGCAAAGTAATGAGCTTCTaGTTGGCTGGCAAGATGGGC +
Preference number: 4 (lower is better)
Translates to: EAPQPLGEHMCTKLWFTGKVMSF*LAGKMG
Trigger: GCCCATCTTGCCAGCCAATCAGAAGCTCATTACTTT...GCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp TCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTCACTCGTGGAGGATCTaGTATGGAGACAACAGCCCA +
Preference number: 4 (lower is better)
Translates to: SRETAVTGNSSGSRMGYTHSWRI*YGDNSP
Trigger: TGGGCTGTTGTCTCCATATCAGATCCTCCACGAGTG...AGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CTCTCATCTGTCATCCAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAACCCCTGCCCCGGCCTTaGAGCATGGCTGTGTGCACG +
Preference number: 4 (lower is better)
Translates to: LSSVIQASCVVSAYYILKPLPRP*SMAVCT
Trigger: CGTGCACACAGCCATGCTTCAAGGCCGGGGCAGGGG...TTTTAGTATGTAATACGCACTGACGACACATGATGCTTGGATGACAGATGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GACAGTTTGCTTTATGTGTTCAGACAATCAAGGCTCGCCTTCCAGGCACAGCCCGCGAGTCTGTCTTCATaGCGGAGTGGCACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: DSLLYVFRQSRLAFQAQPASLSS*RSGTFL
Trigger: AAGAAAGGTGCCACTCCGGCATGAAGACAGACTCGC...GGGCTGTGCCTGGAAGGCGAGCCTTGATTGTCTGAACACATAAAGCAAACTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351989.8
ENST00000383024.6
CDS-3UTR GCA 90 bp CCGGCAGGAACACATTTCCATCGCACACCCACCCATAGGGGCCACCAGTCGAGATTTGTGGGTGCATCTTaGACTGATAAAGTAATGAGC +
Preference number: 4 (lower is better)
Translates to: PAGTHFHRTPTHRGHQSRFVGAS*TDKVMS
Trigger: GCTCATTACTTTATCAGTGCAAGATGCACCCACAAA...TCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGATGGAAATGTGTTCCTGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCAGCTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCTTTGTGGGTGCATCTTaGACTGATAAAGTAATGAGC +
Preference number: 4 (lower is better)
Translates to: PAATGAVAESIHSGLELSFVGAS*TDKVMS
Trigger: GCTCATTACTTTATCAGTGCAAGATGCACCCACAAA...GGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GACAGTTTGCTTTATGTGTTCAGACAATCAAGGCTCGCCTTCCAGGCACAGCCCTGTACTCGTGCAGGATaGAGACCTCGGATTTCCCGT +
Preference number: 4 (lower is better)
Translates to: DSLLYVFRQSRLAFQAQPCTRAG*RPRISR
Trigger: ACGGGAAATCCGAGGTCTGCATCCTGCACGAGTACA...GGGCTGTGCCTGGAAGGCGAGCCTTGATTGTCTGAACACATAAAGCAAACTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GCTAAGGGCAACAGTCACAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCACGCTGCATGTACTCGTaGAGGATGCAGACCTCGGAT +
Preference number: 4 (lower is better)
Translates to: AKGNSHSQMTIHSCRQEARCMYS*RMQTSD
Trigger: ATCCGAGGTCTGCATCCTGCACGAGTACATGCAGCG...TGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp AGAACGCTGGACTCTTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTGCATTCTTCTTGGCATACTaGTGCAGCTCAATCACACTC +
Preference number: 4 (lower is better)
Translates to: RTLDSCFRWRTTSTRHSAFFLAY*CSSITL
Trigger: GAGTGTGATTGAGCTGCAGCAGTATGCCAAGAAGAA...TGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACACCACCTTGATGGTTTaGCTCCAATCCCAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHTTLMV*LQSQKA
Trigger: AGCTTTCTGGGATTGGAGGCAAACCATCAAGGTGGT...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGCACTGCCTCAATTATTaGAAATCACAATGCACTCAG +
Preference number: 4 (lower is better)
Translates to: PEARKGREGLSVQRGAFRHCLNY*KSQCTQ
Trigger: CTGAGTGCATTGTGATTTCCAATAATTGAGGCAGTG...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351989.8
ENST00000383024.6
CDS-3UTR CCA 90 bp CTGGCATCGTGTCCAGACTGGAGAGGGACCACCTTGATGGTTTGCCTCCAATCCGTTCTTCACTGTCTTTaGGCTTCTCTTCAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LASCPDWRGTTLMVCLQSVLHCL*ASLQRS
Trigger: AGACCTCTGAAGAGAAGCCCAAAGACAGTGAAGAAC...GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp AGAACGCTGGACTCTTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTGCAGTTCTTCACTGTCTTTaGGCTTCTCTTCAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: RTLDSCFRWRTTSTRHSAVLHCL*ASLQRS
Trigger: AGACCTCTGAAGAGAAGCCCAAAGACAGTGAAGAAC...TGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTTCCTCGATGCTGATGTaGTTAAAATACTCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: QSLSPSIQAWSFPGRAAASSMLM*LKYSSS
Trigger: AGAACTCGAGTATTTTAACCACATCAGCATCGAGGA...AGCAGCGGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAAACGTATTCACTCTTCTaGTTTTTCCCAGGAACCACT +
Preference number: 4 (lower is better)
Translates to: WWCLGTARHSEAPQPLGETYSLF*FFPGTT
Trigger: AGTGGTTCCTGGGAAAAACCAGAAGAGTGAATACGT...TTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CTCTCATCTGTCATCCAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAAGGCTCACCGCCAGGCTaGGCGGACGCCACAATGGAC +
Preference number: 4 (lower is better)
Translates to: LSSVIQASCVVSAYYILKGSPPG*ADATMD
Trigger: GTCCATTGTGGCGTCCGCCCAGCCTGGCGGTGAGCC...TTTTAGTATGTAATACGCACTGACGACACATGATGCTTGGATGACAGATGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCTGCTGTGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTTTAAAAATCAATGGGTaGACATATGGACTCGACTGC +
Preference number: 4 (lower is better)
Translates to: PAVVVPGNSKTQRGSPTFLKING*TYGLDC
Trigger: GCAGTCGAGTCCATATGTCCACCCATTGATTTTTAA...AAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GACAGTTTGCTTTATGTGTTCAGACAATCAAGGCTCGCCTTCCAGGCACAGCCCATGTGCACGAAGCTTTaGTTCACAGGCGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: DSLLYVFRQSRLAFQAQPMCTKL*FTGASG
Trigger: GCCAGATGCGCCTGTGAACCAAAGCTTCGTGCACAT...GGGCTGTGCCTGGAAGGCGAGCCTTGATTGTCTGAACACATAAAGCAAACTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCAAGACAGAAGCAAGTGTCAAGCTCCGTAGAAGTTaGAGGGGTCCTCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: QSNDYSQLQTGGKTEASVKLRRS*RGPQQG
Trigger: TCCCTGCTGAGGACCCCTTCAACTTCTACGGAGCTT...GACACTTGCTTCTGTCTTGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp GCTAAGGGCAACAGTCACAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCAGCTTGCCACACGCCATaGCGTATTCACTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: AKGNSHSQMTIHSCRQEAACHTP*RIHSSG
Trigger: ACCAGAAGAGTGAATACGTCATGGCGTGTGGCAAGC...TGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACACAGTCACAGTCAAATaGCTATTCACAGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHTVTVK*LFTAAD
Trigger: GTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGT...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCTTGCTTCCTGTTTCAACAAGTCCACTTGCTAAAATGCATGATTCCAAATCTACATCACCGCTTCTCCTaGGGGCCCACACGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: PCFLFQQVHLLKCMIPNLHHRFS*GPTRER
Trigger: CCGCTCCCGTGTGGGCCCGCAGGAGAAGCGGTGATG...TAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATTTTTTCACAGTAACTTaGTCAAAGTCAAAACGCTTC +
Preference number: 4 (lower is better)
Translates to: GLELSRESRCSTCVLCGHFFTVT*SKSKRF
Trigger: GAAGCGTTTTGACTTTGAGCAAGTTACTGTGAAAAA...ATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCCAGGCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp TTGGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGTCAAATGACTAGCTTGCTGAGGATGTaGAGGTTGGGCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LVHRRIWLAKGNSHSQMTSLLRM*RLGLFF
Trigger: GAAGAACAAGCCCAACCTGCACATCCTCAGCAAGCT...AGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTGTCCACTTGCTAAAATaGATGATTCCAAATCTACCT +
Preference number: 4 (lower is better)
Translates to: QSLSPSIQAWSFPGRAAAVHLLK*MIPNLP
Trigger: AGGTAGATTTGGAATCATGCATTTTAGCAAGTGGAC...AGCAGCGGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TTGGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGTCAAATGACTCTCAGCTTAAGTGACTaGCGACTAAGCGAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: LVHRRIWLAKGNSHSQMTLSLSD*RLSESV
Trigger: GACAGACTCGCTTAGTCGCCAGTCACTTAAGCTGAG...AGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351989.8
ENST00000383024.6
CDS-3UTR CCA 90 bp GACAGTTTGCTTTATGTGTTCAGACAATCAAGGCTCGCCTTCCAGGCACAGCCCCTGTTCGCCTCTTTTTaGGGGCACAAAGGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: DSLLYVFRQSRLAFQAQPLFASF*GHKGLL
Trigger: AAGAAGGCCTTTGTGCCCCCAAAAAGAGGCGAACAG...GGGCTGTGCCTGGAAGGCGAGCCTTGATTGTCTGAACACATAAAGCAAACTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TTGGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGTCAAATGACTGGGACTCCAGAGTTATaGAATGTCATGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: LVHRRIWLAKGNSHSQMTGTPEL*NVMIHP
Trigger: CGGGTGGATCATGACATTCCATAACTCTGGAGTCCC...AGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAATCCTCGATGCTGATGTaGTTAAAATACTCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: WWCLGTARHSEAPQPLGESSMLM*LKYSSS
Trigger: AGAACTCGAGTATTTTAACCACATCAGCATCGAGGA...TTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAATTCATGAAAGCCTTCGGCTCACCGCCAGGCTaGGCGGACGCCACAATGGAC +
Preference number: 4 (lower is better)
Translates to: QASCVVSAYYILKFMKAFGSPPG*ADATMD
Trigger: GTCCATTGTGGCGTCCGCCCAGCCTGGCGGTGAGCC...GAAGGCTTTCATGAATTTTAGTATGTAATACGCACTGACGACACATGATGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCTTGCTTCCTGTTTCAACAAGTCCACTTGCTAAAATGCATGATTCCAAATCTAGCCGGGCCCACAGGTTaGCCACAGGGAAGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: PCFLFQQVHLLKCMIPNLAGPTG*PQGRSV
Trigger: CACGCTCCTTCCCTGTGGCCAACCTGTGGGCCCGGC...TAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAATTAAAAATCAATGGGTaGACATATGGACTCGACTGC +
Preference number: 4 (lower is better)
Translates to: WWCLGTARHSEAPQPLGELKING*TYGLDC
Trigger: GCAGTCGAGTCCATATGTCCACCCATTGATTTTTAA...TTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GCTAAGGGCAACAGTCACAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCACCCGGCCTTGAAGCATaGCTGTGTGCACGATTCATA +
Preference number: 4 (lower is better)
Translates to: AKGNSHSQMTIHSCRQEAPGLEA*LCARFI
Trigger: TATGAATCGTGCACACAGCCATGCTTCAAGGCCGGG...TGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CTCTCATCTGTCATCCAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAAGCCCAGTGCCCTGGATaGCATCAGCACAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LSSVIQASCVVSAYYILKAQCPG*HQHRLP
Trigger: GGGGAGCCTGTGCTGATGCCATCCAGGGCACTGGGC...TTTTAGTATGTAATACGCACTGACGACACATGATGCTTGGATGACAGATGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CTCTCATCTGTCATCCAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAAACCAGGGCCAGCCTTTaGGCACACCCTGGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LSSVIQASCVVSAYYILKTRASL*AHPGAS
Trigger: TGAGGCACCAGGGTGTGCTCAAAGGCTGGCCCTGGT...TTTTAGTATGTAATACGCACTGACGACACATGATGCTTGGATGACAGATGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CTTGCTAAAATGCATGATTCCAAATCTACCTTCTACTCTCACTGTGAAAGTCTTCATCACCGCTTCTCCTaGGGGCCCACACGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LAKMHDSKSTFYSHCESLHHRFS*GPTRER
Trigger: CCGCTCCCGTGTGGGCCCGCAGGAGAAGCGGTGATG...AAGACTTTCACAGTGAGAGTAGAAGGTAGATTTGGAATCATGCATTTTAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCTTGCTTCCTGTTTCAACAAGTCCACTTGCTAAAATGCATGATTCCAAATCTAGGAGGTGGTGGAGACTaGTCACGGGGCAGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: PCFLFQQVHLLKCMIPNLGGGGD*SRGSAW
Trigger: CCAAGCGCTGCCCCGTGAGCAGTCTCCACCACCTCC...TAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAATTCATGAAAGCCTTCGGAGGTGGTGGAGACTaGTCACGGGGCAGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: QASCVVSAYYILKFMKAFGGGGD*SRGSAW
Trigger: CCAAGCGCTGCCCCGTGAGCAGTCTCCACCACCTCC...GAAGGCTTTCATGAATTTTAGTATGTAATACGCACTGACGACACATGATGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCTGCTGTGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTTTTTTCACAGTAACTTaGTCAAAGTCAAAACGCTTC +
Preference number: 4 (lower is better)
Translates to: PAVVVPGNSKTQRGSPTFFFTVT*SKSKRF
Trigger: GAAGCGTTTTGACTTTGAGCAAGTTACTGTGAAAAA...AAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGG
50% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCAAGACAGAAGCAAGTGTCTGTACTCGTGCAGGATaGAGACCTCGGATTTCCCGT +
Preference number: 4 (lower is better)
Translates to: QSNDYSQLQTGGKTEASVCTRAG*RPRISR
Trigger: ACGGGAAATCCGAGGTCTGCATCCTGCACGAGTACA...GACACTTGCTTCTGTCTTGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GCTAAGGGCAACAGTCACAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCAAGCTTGCTGAGGATGTaGAGGTTGGGCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: AKGNSHSQMTIHSCRQEASLLRM*RLGLFF
Trigger: GAAGAACAAGCCCAACCTGCACATCCTCAGCAAGCT...TGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAATTCATGAAAGCCTTCGGCACTCTGCACAGGTaGCAGTCCACCACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QASCVVSAYYILKFMKAFGTLHR*QSTTRA
Trigger: GGCCCTGGTGGTGGACTGGCACCTGTGCAGAGTGCC...GAAGGCTTTCATGAATTTTAGTATGTAATACGCACTGACGACACATGATGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CTGGCATCGTGTCCAGACTGGAGAGGGACCACCTTGATGGTTTGCCTCCAATCCCACTGCCTCAATTATTaGAAATCACAATGCACTCAG +
Preference number: 4 (lower is better)
Translates to: LASCPDWRGTTLMVCLQSHCLNY*KSQCTQ
Trigger: CTGAGTGCATTGTGATTTCCAATAATTGAGGCAGTG...GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351989.8
ENST00000383024.6
CDS-3UTR CCA 90 bp CTCTCATCTGTCATCCAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAATTGCAGGGGAGGTGGTaGAGACTGCTCACGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LSSVIQASCVVSAYYILKLQGRW*RLLTGQ
Trigger: CTGCCCCGTGAGCAGTCTCCACCACCTCCCCTGCAA...TTTTAGTATGTAATACGCACTGACGACACATGATGCTTGGATGACAGATGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TTGGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGTCAAATGACTGTGTCACCCATCCCATaGTTTCTTTTAAGGCACTCG +
Preference number: 4 (lower is better)
Translates to: LVHRRIWLAKGNSHSQMTVSPIP*FLLRHS
Trigger: CGAGTGCCTTAAAAGAAACCATGGGATGGGTGACAC...AGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GACAGTTTGCTTTATGTGTTCAGACAATCAAGGCTCGCCTTCCAGGCACAGCCCTGGGCTTGTTCTTCTTaGCATACTGCTGCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: DSLLYVFRQSRLAFQAQPWACSS*HTAAAQ
Trigger: TTGAGCTGCAGCAGTATGCCAAGAAGAACAAGCCCA...GGGCTGTGCCTGGAAGGCGAGCCTTGATTGTCTGAACACATAAAGCAAACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCAAGACAGAAGCAAGTGTCCCCGGCCTTGAAGCATaGCTGTGTGCACGATTCATA +
Preference number: 4 (lower is better)
Translates to: QSNDYSQLQTGGKTEASVPGLEA*LCARFI
Trigger: TATGAATCGTGCACACAGCCATGCTTCAAGGCCGGG...GACACTTGCTTCTGTCTTGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCAAGACAGAAGCAAGTGTCTCCACTCTGTCTCTCTaGACGATTGCTTTAGCCGTG +
Preference number: 4 (lower is better)
Translates to: QSNDYSQLQTGGKTEASVSTLSL*TIALAV
Trigger: CACGGCTAAAGCAATCGTTCAGAGAGACAGAGTGGA...GACACTTGCTTCTGTCTTGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CTCTCATCTGTCATCCAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAAACCATGTGCACCTCCTaGCCAGGTCCCTGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: LSSVIQASCVVSAYYILKTMCTS*PGPCSS
Trigger: GCTGCTACAGGGACCTGGTCAGGAGGTGCACATGGT...TTTTAGTATGTAATACGCACTGACGACACATGATGCTTGGATGACAGATGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCAAGACAGAAGCAAGTGTCAATGCAGACAAGGGATaGTACTCAGAGGAGGGTCGT +
Preference number: 4 (lower is better)
Translates to: QSNDYSQLQTGGKTEASVNADKG*YSEEGR
Trigger: ACGACCCTCCTCTGAGTAGCATCCCTTGTCTGCATT...GACACTTGCTTCTGTCTTGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CTTGCTAAAATGCATGATTCCAAATCTACCTTCTACTCTCACTGTGAAAGTCTTCTCACACGTCCACGGTaGACAGGGGCTCACCGCCAG +
Preference number: 4 (lower is better)
Translates to: LAKMHDSKSTFYSHCESLLTRPR*TGAHRQ
Trigger: CTGGCGGTGAGCCCCTGTGCACCGTGGACGTGTGAG...AAGACTTTCACAGTGAGAGTAGAAGGTAGATTTGGAATCATGCATTTTAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GACAGTTTGCTTTATGTGTTCAGACAATCAAGGCTCGCCTTCCAGGCACAGCCCTTCATAAAAAGAGCCTaGAGCAGGTGCACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: DSLLYVFRQSRLAFQAQPFIKRA*SRCTEA
Trigger: TGCTTCTGTGCACCTGCTGCAGGCTCTTTTTATGAA...GGGCTGTGCCTGGAAGGCGAGCCTTGATTGTCTGAACACATAAAGCAAACTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAATTCATGAAAGCCTTCCCAGGCACAGCCCAGTaGCCTGGATGGCATCAGCAC +
Preference number: 4 (lower is better)
Translates to: QASCVVSAYYILKFMKAFPGTAQ*PGWHQH
Trigger: GTGCTGATGCCATCCAGGGCACTGGGCTGTGCCTGG...GAAGGCTTTCATGAATTTTAGTATGTAATACGCACTGACGACACATGATGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTGTTCTTCACTGTCTTTaGGCTTCTCTTCAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SRETAVTGNSSGSRMGYTVLHCL*ASLQRS
Trigger: AGACCTCTGAAGAGAAGCCCAAAGACAGTGAAGAAC...AGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp AGGCAGCTGCCTTTGACATCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCCTCGATGCTGATGTaGTTAAAATACTCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: RQLPLTSRETAVTGNSSGSSMLM*LKYSSS
Trigger: AGAACTCGAGTATTTTAACCACATCAGCATCGAGGA...TCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGATGTCAAAGGCAGCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GCTAAGGGCAACAGTCACAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCACCACAATGGACATCTTaGGCTTCTTTCGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: AKGNSHSQMTIHSCRQEAPQWTS*ASFESP
Trigger: AGGAGACTCGAAAGAAGCCCAAGATGTCCATTGTGG...TGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp AGAACGCTGGACTCTTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTGCAAGCTTTAAAAATCAATaGGTGGACATATGGACTCGA +
Preference number: 4 (lower is better)
Translates to: RTLDSCFRWRTTSTRHSASFKNQ*VDIWTR
Trigger: TCGAGTCCATATGTCCACCCATTGATTTTTAAAGCT...TGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CTCTCATCTGTCATCCAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAAAGACAGGGCGGACCTTaGGGACACGCTGCATGTACT +
Preference number: 4 (lower is better)
Translates to: LSSVIQASCVVSAYYILKRQGGP*GHAACT
Trigger: AGTACATGCAGCGTGTCCTCAAGGTCCGCCCTGTCT...TTTTAGTATGTAATACGCACTGACGACACATGATGCTTGGATGACAGATGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CTCTCATCTGTCATCCAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAAGGAGAGGGACCACCTTaGTGGTTTGCCTCCAATCCC +
Preference number: 4 (lower is better)
Translates to: LSSVIQASCVVSAYYILKGEGPP*WFASNP
Trigger: GGGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCC...TTTTAGTATGTAATACGCACTGACGACACATGATGCTTGGATGACAGATGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp AATATCACAAAAGCTTTAAAAATCAATGGGTGGACATATGGACTCGACTGCAAACGTCCTGCCGCGCTGTaGGCTGGCGGCTTAGTCAAG +
Preference number: 4 (lower is better)
Translates to: NITKALKINGWTYGLDCKRPAAL*AGGLVK
Trigger: CTTGACTAAGCCGCCAGCGCACAGCGCGGCAGGACG...TTTGCAGTCGAGTCCATATGTCCACCCATTGATTTTTAAAGCTTTTGTGATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CTCTCATCTGTCATCCAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAAAAGCACACGGCACTCTaGACAGGTGCCAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: LSSVIQASCVVSAYYILKKHTAL*TGASPP
Trigger: TGGTGGACTGGCACCTGTGCAGAGTGCCGTGTGCTT...TTTTAGTATGTAATACGCACTGACGACACATGATGCTTGGATGACAGATGAGAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp GCTAAGGGCAACAGTCACAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCATTAGGGGAACACATGTaGACGAAGCTTTGGTTCACA +
Preference number: 4 (lower is better)
Translates to: AKGNSHSQMTIHSCRQEALGEHM*TKLWFT
Trigger: TGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAA...TGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CTCTCATCTGTCATCCAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAACACGATTCATACCCATaGTTGGCAGACGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LSSVIQASCVVSAYYILKHDSYP*LADGWG
Trigger: CCCCCACCCGTCTGCCAAGCATGGGTATGAATCGTG...TTTTAGTATGTAATACGCACTGACGACACATGATGCTTGGATGACAGATGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp AATATCACAAAAGCTTTAAAAATCAATGGGTGGACATATGGACTCGACTGCAAATGCCGCGCTGTGCGCTaGCGGCTTAGTCAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: NITKALKINGWTYGLDCKCRAVR*RLSQAG
Trigger: GCCAGCTTGACTAAGCCGCCAGCGCACAGCGCGGCA...TTTGCAGTCGAGTCCATATGTCCACCCATTGATTTTTAAAGCTTTTGTGATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp ATGGTTTGCCTCCAATCCCAGAAAGCTAGTTCTGATGCTAAAATTCTGTTTAAGGGAAGGAGCGTGGGTTaGAGGCCTGACACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: MVCLQSQKASSDAKILFKGRSVG*RPDTVV
Trigger: CACCACAGTGTCAGGCCTCCAACCCACGCTCCTTCC...CTTAAACAGAATTTTAGCATCAGAACTAGCTTTCTGGGATTGGAGGCAAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CTCTCATCTGTCATCCAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAACCGATGTCTCCTGCTTaGCCATCTTGCTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: LSSVIQASCVVSAYYILKPMSPA*PSCCSH
Trigger: GTGAGAGCAGCAAGATGGTCAAGCAGGAGACATCGG...TTTTAGTATGTAATACGCACTGACGACACATGATGCTTGGATGACAGATGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CCTTGCTTCCTGTTTCAACAAGTCCACTTGCTAAAATGCATGATTCCAAATCTAGGAGAGGGACCACCTTaGTGGTTTGCCTCCAATCCC +
Preference number: 4 (lower is better)
Translates to: PCFLFQQVHLLKCMIPNLGEGPP*WFASNP
Trigger: GGGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCC...TAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp ATGGTTTGCCTCCAATCCCAGAAAGCTAGTTCTGATGCTAAAATTCTGTTTAAGGCTGCTCCACATGTGTaGTGTGTGGCCATGGCTGTC +
Preference number: 4 (lower is better)
Translates to: MVCLQSQKASSDAKILFKAAPHV*CVAMAV
Trigger: GACAGCCATGGCCACACAGCACACATGTGGAGCAGC...CTTAAACAGAATTTTAGCATCAGAACTAGCTTTCTGGGATTGGAGGCAAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCAAGACAGAAGCAAGTGTCTTCATAAAAAGAGCCTaGAGCAGGTGCACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: QSNDYSQLQTGGKTEASVFIKRA*SRCTEA
Trigger: TGCTTCTGTGCACCTGCTGCAGGCTCTTTTTATGAA...GACACTTGCTTCTGTCTTGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp TTGGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGTCAAATGACTCAAACTCTTTCTTTGTaGGTGCATCTTGCACTGATA +
Preference number: 4 (lower is better)
Translates to: LVHRRIWLAKGNSHSQMTQTLSL*VHLALI
Trigger: TATCAGTGCAAGATGCACCCACAAAGAAAGAGTTTG...AGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAATTCATGAAAGCCTTCGGAGGCCTGACACTGTaGTGCACGATGCATGACTGC +
Preference number: 4 (lower is better)
Translates to: QASCVVSAYYILKFMKAFGGLTL*CTMHDC
Trigger: GCAGTCATGCATCGTGCACCACAGTGTCAGGCCTCC...GAAGGCTTTCATGAATTTTAGTATGTAATACGCACTGACGACACATGATGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CTCTCATCTGTCATCCAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAAACAGGCGCATCTGGCTaGCTAAGGGCAACAGTCACA +
Preference number: 4 (lower is better)
Translates to: LSSVIQASCVVSAYYILKTGASG*LRATVT
Trigger: TGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGT...TTTTAGTATGTAATACGCACTGACGACACATGATGCTTGGATGACAGATGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CTCTCATCTGTCATCCAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAATGCACTCAGCTTAAGTaGCTGGCGACTAAGCGAGTC +
Preference number: 4 (lower is better)
Translates to: LSSVIQASCVVSAYYILKCTQLK*LATKRV
Trigger: GACTCGCTTAGTCGCCAGTCACTTAAGCTGAGTGCA...TTTTAGTATGTAATACGCACTGACGACACATGATGCTTGGATGACAGATGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351989.8
ENST00000383024.6
CDS-3UTR TCA 90 bp ATGGTTTGCCTCCAATCCCAGAAAGCTAGTTCTGATGCTAAAATTCTGTTTAAGAGTTATGGAATGTCATaGTCCACCCGTCGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: MVCLQSQKASSDAKILFKSYGMS*STRRAA
Trigger: CGCTGCCCGACGGGTGGATCATGACATTCCATAACT...CTTAAACAGAATTTTAGCATCAGAACTAGCTTTCTGGGATTGGAGGCAAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CCTTGCTTCCTGTTTCAACAAGTCCACTTGCTAAAATGCATGATTCCAAATCTAGTGGTGCACGATGCATaGCTGCTGGTCTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: PCFLFQQVHLLKCMIPNLVVHDA*LLVSSE
Trigger: TTCTGAGGAGACCAGCAGTCATGCATCGTGCACCAC...TAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CTTGCTAAAATGCATGATTCCAAATCTACCTTCTACTCTCACTGTGAAAGTCTTACAACAGCCCAGCCTTaGTGGTCAGCTCGTAGACCC +
Preference number: 4 (lower is better)
Translates to: LAKMHDSKSTFYSHCESLTTAQP*WSARRP
Trigger: GGGTCTACGAGCTGACCAGCAAGGCTGGGCTGTTGT...AAGACTTTCACAGTGAGAGTAGAAGGTAGATTTGGAATCATGCATTTTAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCTTGCTTCCTGTTTCAACAAGTCCACTTGCTAAAATGCATGATTCCAAATCTACACTGTGGTGCACGATaGATGACTGCTGGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PCFLFQQVHLLKCMIPNLHCGAR*MTAGLL
Trigger: GAGGAGACCAGCAGTCATGCATCGTGCACCACAGTG...TAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp ATGGTTTGCCTCCAATCCCAGAAAGCTAGTTCTGATGCTAAAATTCTGTTTAAGGCAGGACGTCATCCTTaGTGGCATCGTGTCCAGACT +
Preference number: 4 (lower is better)
Translates to: MVCLQSQKASSDAKILFKAGRHP*WHRVQT
Trigger: AGTCTGGACACGATGCCAGCAAGGATGACGTCCTGC...CTTAAACAGAATTTTAGCATCAGAACTAGCTTTCTGGGATTGGAGGCAAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp ATGGTTTGCCTCCAATCCCAGAAAGCTAGTTCTGATGCTAAAATTCTGTTTAAGACGATGCATGACTGCTaGTCTCCTCAGAAGTGCGGC +
Preference number: 4 (lower is better)
Translates to: MVCLQSQKASSDAKILFKTMHDC*SPQKCG
Trigger: GCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGT...CTTAAACAGAATTTTAGCATCAGAACTAGCTTTCTGGGATTGGAGGCAAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CTTGCTAAAATGCATGATTCCAAATCTACCTTCTACTCTCACTGTGAAAGTCTTCCATCCATTCAGGCCTaGAGCTTTCCAGGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LAKMHDSKSTFYSHCESLPSIQA*SFPGRA
Trigger: GGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGG...AAGACTTTCACAGTGAGAGTAGAAGGTAGATTTGGAATCATGCATTTTAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCTTGCTTCCTGTTTCAACAAGTCCACTTGCTAAAATGCATGATTCCAAATCTAGGACGTCATCCTTGCTaGCATCGTGTCCAGACTGGA +
Preference number: 4 (lower is better)
Translates to: PCFLFQQVHLLKCMIPNLGRHPC*HRVQTG
Trigger: TCCAGTCTGGACACGATGCCAGCAAGGATGACGTCC...TAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCTTGCTTCCTGTTTCAACAAGTCCACTTGCTAAAATGCATGATTCCAAATCTAGGTAACTCCAGGAGGTaGCAGGACGTCATCCTTGCT +
Preference number: 4 (lower is better)
Translates to: PCFLFQQVHLLKCMIPNLGNSRR*QDVILA
Trigger: AGCAAGGATGACGTCCTGCCACCTCCTGGAGTTACC...TAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCTTGCTTCCTGTTTCAACAAGTCCACTTGCTAAAATGCATGATTCCAAATCTAGTTCACAGGCGCATCTaGCTGGCTAAGGGCAACAGT +
Preference number: 4 (lower is better)
Translates to: PCFLFQQVHLLKCMIPNLVHRRI*LAKGNS
Trigger: ACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAAC...TAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp ATGGTTTGCCTCCAATCCCAGAAAGCTAGTTCTGATGCTAAAATTCTGTTTAAGCACTCGTGGAGGATCTaGTATGGAGACAACAGCCCA +
Preference number: 4 (lower is better)
Translates to: MVCLQSQKASSDAKILFKHSWRI*YGDNSP
Trigger: TGGGCTGTTGTCTCCATATCAGATCCTCCACGAGTG...CTTAAACAGAATTTTAGCATCAGAACTAGCTTTCTGGGATTGGAGGCAAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CTTGCTAAAATGCATGATTCCAAATCTACCTTCTACTCTCACTGTGAAAGTCTTGTGGTGCACGATGCATaGCTGCTGGTCTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: LAKMHDSKSTFYSHCESLVVHDA*LLVSSE
Trigger: TTCTGAGGAGACCAGCAGTCATGCATCGTGCACCAC...AAGACTTTCACAGTGAGAGTAGAAGGTAGATTTGGAATCATGCATTTTAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp AATATCACAAAAGCTTTAAAAATCAATGGGTGGACATATGGACTCGACTGCAAAGGAGAGGGACCACCTTaGTGGTTTGCCTCCAATCCC +
Preference number: 4 (lower is better)
Translates to: NITKALKINGWTYGLDCKGEGPP*WFASNP
Trigger: GGGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCC...TTTGCAGTCGAGTCCATATGTCCACCCATTGATTTTTAAAGCTTTTGTGATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp AATATCACAAAAGCTTTAAAAATCAATGGGTGGACATATGGACTCGACTGCAAACCAGGCAGCTGCCTTTaGCATCCAGAGAAACCGCTG +
Preference number: 4 (lower is better)
Translates to: NITKALKINGWTYGLDCKPGSCL*HPEKPL
Trigger: CAGCGGTTTCTCTGGATGTCAAAGGCAGCTGCCTGG...TTTGCAGTCGAGTCCATATGTCCACCCATTGATTTTTAAAGCTTTTGTGATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp ATGGTTTGCCTCCAATCCCAGAAAGCTAGTTCTGATGCTAAAATTCTGTTTAAGGTCTCTCTGAACGATTaGTTTAGCCGTGAACCCGCC +
Preference number: 4 (lower is better)
Translates to: MVCLQSQKASSDAKILFKVSLND*FSREPA
Trigger: GGCGGGTTCACGGCTAAAGCAATCGTTCAGAGAGAC...CTTAAACAGAATTTTAGCATCAGAACTAGCTTTCTGGGATTGGAGGCAAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CTCTCATCTGTCATCCAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAAGGTCGTGTTTCCGTATaGTTCCCGTTCCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: LSSVIQASCVVSAYYILKGRVSV*FPFPRS
Trigger: ACTTCTTGGGAACGGGAAGCATACGGAAACACGACC...TTTTAGTATGTAATACGCACTGACGACACATGATGCTTGGATGACAGATGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAATTCATGAAAGCCTTCTGCACGATGCATGACTaGTGGTCTCCTCAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: QASCVVSAYYILKFMKAFCTMHD*WSPQKC
Trigger: GCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCA...GAAGGCTTTCATGAATTTTAGTATGTAATACGCACTGACGACACATGATGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp AATATCACAAAAGCTTTAAAAATCAATGGGTGGACATATGGACTCGACTGCAAACACCTGCTGTGGTGGTaGCTGGGAACAGCAAGACAC +
Preference number: 4 (lower is better)
Translates to: NITKALKINGWTYGLDCKHLLWW*LGTARH
Trigger: GTGTCTTGCTGTTCCCAGGCACCACCACAGCAGGTG...TTTGCAGTCGAGTCCATATGTCCACCCATTGATTTTTAAAGCTTTTGTGATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp AATATCACAAAAGCTTTAAAAATCAATGGGTGGACATATGGACTCGACTGCAAAGAGTATGGCAGCACCTaGTGTGGTGGTGCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: NITKALKINGWTYGLDCKEYGST*CGGAWE
Trigger: TTCCCAGGCACCACCACAGCAGGTGCTGCCATACTC...TTTGCAGTCGAGTCCATATGTCCACCCATTGATTTTTAAAGCTTTTGTGATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp GCTAAGGGCAACAGTCACAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCAAGCTTTAAAAATCAATaGGTGGACATATGGACTCGA +
Preference number: 4 (lower is better)
Translates to: AKGNSHSQMTIHSCRQEASFKNQ*VDIWTR
Trigger: TCGAGTCCATATGTCCACCCATTGATTTTTAAAGCT...TGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp ATGGTTTGCCTCCAATCCCAGAAAGCTAGTTCTGATGCTAAAATTCTGTTTAAGCCCGGCCTTGAAGCATaGCTGTGTGCACGATTCATA +
Preference number: 4 (lower is better)
Translates to: MVCLQSQKASSDAKILFKPGLEA*LCARFI
Trigger: TATGAATCGTGCACACAGCCATGCTTCAAGGCCGGG...CTTAAACAGAATTTTAGCATCAGAACTAGCTTTCTGGGATTGGAGGCAAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp AATATCACAAAAGCTTTAAAAATCAATGGGTGGACATATGGACTCGACTGCAAAAAGCTCCGTAGAAGTTaGAGGGGTCCTCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: NITKALKINGWTYGLDCKKLRRS*RGPQQG
Trigger: TCCCTGCTGAGGACCCCTTCAACTTCTACGGAGCTT...TTTGCAGTCGAGTCCATATGTCCACCCATTGATTTTTAAAGCTTTTGTGATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp CCTTGCTTCCTGTTTCAACAAGTCCACTTGCTAAAATGCATGATTCCAAATCTATCCACTCTGTCTCTCTaGACGATTGCTTTAGCCGTG +
Preference number: 4 (lower is better)
Translates to: PCFLFQQVHLLKCMIPNLSTLSL*TIALAV
Trigger: CACGGCTAAAGCAATCGTTCAGAGAGACAGAGTGGA...TAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR TCA 90 bp AATATCACAAAAGCTTTAAAAATCAATGGGTGGACATATGGACTCGACTGCAAATGTGGGTGCAGCAGCTaGAGGATCTTCTGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: NITKALKINGWTYGLDCKCGCSS*RIFCEA
Trigger: AGCCTCACAGAAGATCCTTCAGCTGCTGCACCCACA...TTTGCAGTCGAGTCCATATGTCCACCCATTGATTTTTAAAGCTTTTGTGATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CCTTGCTTCCTGTTTCAACAAGTCCACTTGCTAAAATGCATGATTCCAAATCTATCTACACAGCTAACATaGACAAGTCCGCTGAGACCC +
Preference number: 4 (lower is better)
Translates to: PCFLFQQVHLLKCMIPNLSTQLT*TSPLRP
Trigger: GGGTCTCAGCGGACTTGTGCATGTTAGCTGTGTAGA...TAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp ATGGTTTGCCTCCAATCCCAGAAAGCTAGTTCTGATGCTAAAATTCTGTTTAAGTCTACACAGCTAACATaGACAAGTCCGCTGAGACCC +
Preference number: 4 (lower is better)
Translates to: MVCLQSQKASSDAKILFKSTQLT*TSPLRP
Trigger: GGGTCTCAGCGGACTTGTGCATGTTAGCTGTGTAGA...CTTAAACAGAATTTTAGCATCAGAACTAGCTTTCTGGGATTGGAGGCAAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CTTGCTAAAATGCATGATTCCAAATCTACCTTCTACTCTCACTGTGAAAGTCTTAGAACGCTGGACTCTTaGTTCAGATGGCGCACCACA +
Preference number: 4 (lower is better)
Translates to: LAKMHDSKSTFYSHCESLRTLDS*FRWRTT
Trigger: TGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT...AAGACTTTCACAGTGAGAGTAGAAGGTAGATTTGGAATCATGCATTTTAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCTTGCTTCCTGTTTCAACAAGTCCACTTGCTAAAATGCATGATTCCAAATCTAGGGACTCCAGAGTTATaGAATGTCATGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: PCFLFQQVHLLKCMIPNLGTPEL*NVMIHP
Trigger: CGGGTGGATCATGACATTCCATAACTCTGGAGTCCC...TAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CTCTCATCTGTCATCCAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAAGTGTCACCCATCCCATaGTTTCTTTTAAGGCACTCG +
Preference number: 4 (lower is better)
Translates to: LSSVIQASCVVSAYYILKVSPIP*FLLRHS
Trigger: CGAGTGCCTTAAAAGAAACCATGGGATGGGTGACAC...TTTTAGTATGTAATACGCACTGACGACACATGATGCTTGGATGACAGATGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCTTGCTTCCTGTTTCAACAAGTCCACTTGCTAAAATGCATGATTCCAAATCTACCAGTTCTTGACATGTaGGTGCAGCAGCTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: PCFLFQQVHLLKCMIPNLPVLDM*VQQLKD
Trigger: ATCCTTCAGCTGCTGCACCCACATGTCAAGAACTGG...TAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp ATGGTTTGCCTCCAATCCCAGAAAGCTAGTTCTGATGCTAAAATTCTGTTTAAGCAACGGATTCATCTTTaGACACCTCGACTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: MVCLQSQKASSDAKILFKQRIHL*TPRLWP
Trigger: AGGCCAAAGTCGAGGTGTGCAAAGATGAATCCGTTG...CTTAAACAGAATTTTAGCATCAGAACTAGCTTTCTGGGATTGGAGGCAAACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAATTCATGAAAGCCTTCTGGGCTTGTTCTTCTTaGCATACTGCTGCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: QASCVVSAYYILKFMKAFWACSS*HTAAAQ
Trigger: TTGAGCTGCAGCAGTATGCCAAGAAGAACAAGCCCA...GAAGGCTTTCATGAATTTTAGTATGTAATACGCACTGACGACACATGATGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CTTGCTAAAATGCATGATTCCAAATCTACCTTCTACTCTCACTGTGAAAGTCTTTGTGCTGTGTGGCCATaGCTGTCCCTGTACACTAAA +
Preference number: 4 (lower is better)
Translates to: LAKMHDSKSTFYSHCESLCAVWP*LSLYTK
Trigger: TTTAGTGTACAGGGACAGCCATGGCCACACAGCACA...AAGACTTTCACAGTGAGAGTAGAAGGTAGATTTGGAATCATGCATTTTAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
3UTR CAA 72 bp ACTGAAGGCCCTTGCTTCCTGTTTCAACAAGTCCACTaGCTAAAATGCATGATTCCAAATCTACCTTCTACT +
Preference number: 4 (lower is better)
Translates to: TEGPCFLFQQVH*LKCMIPNLPST
Trigger: AGTAGAAGGTAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGGGCCTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp CTTGCTAAAATGCATGATTCCAAATCTACCTTCTACTCTCACTGTGAAAGTCTTCAACGGATTCATCTTTaGACACCTCGACTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LAKMHDSKSTFYSHCESLQRIHL*TPRLWP
Trigger: AGGCCAAAGTCGAGGTGTGCAAAGATGAATCCGTTG...AAGACTTTCACAGTGAGAGTAGAAGGTAGATTTGGAATCATGCATTTTAGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CTTGCTAAAATGCATGATTCCAAATCTACCTTCTACTCTCACTGTGAAAGTCTTGTGTCACCCATCCCATaGTTTCTTTTAAGGCACTCG +
Preference number: 4 (lower is better)
Translates to: LAKMHDSKSTFYSHCESLVSPIP*FLLRHS
Trigger: CGAGTGCCTTAAAAGAAACCATGGGATGGGTGACAC...AAGACTTTCACAGTGAGAGTAGAAGGTAGATTTGGAATCATGCATTTTAGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CTCTCATCTGTCATCCAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAAACGTATTCACTCTTCTaGTTTTTCCCAGGAACCACT +
Preference number: 4 (lower is better)
Translates to: LSSVIQASCVVSAYYILKTYSLF*FFPGTT
Trigger: AGTGGTTCCTGGGAAAAACCAGAAGAGTGAATACGT...TTTTAGTATGTAATACGCACTGACGACACATGATGCTTGGATGACAGATGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp AATATCACAAAAGCTTTAAAAATCAATGGGTGGACATATGGACTCGACTGCAAACAACGGATTCATCTTTaGACACCTCGACTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: NITKALKINGWTYGLDCKQRIHL*TPRLWP
Trigger: AGGCCAAAGTCGAGGTGTGCAAAGATGAATCCGTTG...TTTGCAGTCGAGTCCATATGTCCACCCATTGATTTTTAAAGCTTTTGTGATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CTCTCATCTGTCATCCAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAACAAACTCTTTCTTTGTaGGTGCATCTTGCACTGATA +
Preference number: 4 (lower is better)
Translates to: LSSVIQASCVVSAYYILKQTLSL*VHLALI
Trigger: TATCAGTGCAAGATGCACCCACAAAGAAAGAGTTTG...TTTTAGTATGTAATACGCACTGACGACACATGATGCTTGGATGACAGATGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCTTGCTTCCTGTTTCAACAAGTCCACTTGCTAAAATGCATGATTCCAAATCTAACGTATTCACTCTTCTaGTTTTTCCCAGGAACCACT +
Preference number: 4 (lower is better)
Translates to: PCFLFQQVHLLKCMIPNLTYSLF*FFPGTT
Trigger: AGTGGTTCCTGGGAAAAACCAGAAGAGTGAATACGT...TAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp ATGGTTTGCCTCCAATCCCAGAAAGCTAGTTCTGATGCTAAAATTCTGTTTAAGTTTGTGGGTGCATCTTaGACTGATAAAGTAATGAGC +
Preference number: 4 (lower is better)
Translates to: MVCLQSQKASSDAKILFKFVGAS*TDKVMS
Trigger: GCTCATTACTTTATCAGTGCAAGATGCACCCACAAA...CTTAAACAGAATTTTAGCATCAGAACTAGCTTTCTGGGATTGGAGGCAAACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CCA 90 bp CCTTGCTTCCTGTTTCAACAAGTCCACTTGCTAAAATGCATGATTCCAAATCTATTAAAAATCAATGGGTaGACATATGGACTCGACTGC +
Preference number: 4 (lower is better)
Translates to: PCFLFQQVHLLKCMIPNLLKING*TYGLDC
Trigger: GCAGTCGAGTCCATATGTCCACCCATTGATTTTTAA...TAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR GCA 90 bp ATGGTTTGCCTCCAATCCCAGAAAGCTAGTTCTGATGCTAAAATTCTGTTTAAGGTCCACTTGCTAAAATaGATGATTCCAAATCTACCT +
Preference number: 4 (lower is better)
Translates to: MVCLQSQKASSDAKILFKVHLLK*MIPNLP
Trigger: AGGTAGATTTGGAATCATGCATTTTAGCAAGTGGAC...CTTAAACAGAATTTTAGCATCAGAACTAGCTTTCTGGGATTGGAGGCAAACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS GCA 90 bp GGCCCCCGCGCCCTGGCCCGTGCCACCTCCCTCACACGTCCACGGTaGACAGGGGCTCACCGCCAGGCTGGGCGGACGCCACAATGGACA +
Preference number: 5 (lower is better)
Translates to: GPRALARATSLTRPR*TGAHRQAGRTPQWT
Trigger: TGTCCATTGTGGCGTCCGCCCAGCCTGGCGGTGAGCCCCTGTGCACCGTGGACGTGTGAGGGAGGTGGCACGGGCCAGGGCGCGGGGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000475941.1
ENST00000495826.5
ENST00000498171.5
CDS GCA 90 bp TGTCAGCTCAGGCACGGGTCCTGGGGTCTGCTGTCCCTCCACAGGTaGCACAGGAATGGCCGTGGCCCGGCAGCCCTCCCGCTAGGGTGG +
Preference number: 5 (lower is better)
Translates to: CQLRHGSWGLLSLHR*HRNGRGPAALPLGW
Trigger: CCACCCTAGCGGGAGGGCTGCCGGGCCACGGCCATTCCTGTGGCACCTGTGGAGGGACAGCAGACCCCAGGACCCGTGCCTGAGCTGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485802.1
CDS CCA 90 bp AAACCACAGCCGGGAAAGCCTCACCGACCGACCGCCGCAGCCATCTaGAAAGCCTGTCCAGGCTCTCCGGTCGCCGGCACCCGCCTGCCG +
Preference number: 5 (lower is better)
Translates to: KPQPGKPHRPTAAAI*KACPGSPVAGTRLP
Trigger: CGGCAGGCGGGTGCCGGCGACCGGAGAGCCTGGACAGGCTTTCCAGATGGCTGCGGCGGTCGGTCGGTGAGGCTTTCCCGGCTGTGGTTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351989.8
ENST00000383024.6
CDS CCA 90 bp CTGTGGTGCACGATGCATGACTGCTGGTCTCCTCAGAAGTGCGGCTaGCGGCCCCCGCGCCCTGGCCCGTGCCACCTCCCTCACACGTCC +
Preference number: 5 (lower is better)
Translates to: LWCTMHDCWSPQKCG*RPPRPGPCHLPHTS
Trigger: GGACGTGTGAGGGAGGTGGCACGGGCCAGGGCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCACCACAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000475941.1
ENST00000495826.5
ENST00000498171.5
CDS-3UTR CAA 90 bp TGCACGATGCATGACTGCTGGTCTCCTCAGAAGTGCGGCTGGCGGCCCCCGCGCCTCACGGGGCAGCGCTaGGAAGGGGCGAGCTCGGCT +
Preference number: 5 (lower is better)
Translates to: CTMHDCWSPQKCGWRPPRLTGQR*EGASSA
Trigger: AGCCGAGCTCGCCCCTTCCAAGCGCTGCCCCGTGAG...GCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS TCA 90 bp GCCAGCACACACAGCTGGGCTCAGGGACAATGCCAGGGCAACAGCTaGGACCAAGCCACAGAGGCGCAGGGCCACACCAGGGGCCGCCCG +
Preference number: 5 (lower is better)
Translates to: ASTHSWAQGQCQGNS*DQATEAQGHTRGRP
Trigger: CGGGCGGCCCCTGGTGTGGCCCTGCGCCTCTGTGGCTTGGTCTCAGCTGTTGCCCTGGCATTGTCCCTGAGCCCAGCTGTGTGTGCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491892.1
CDS GCA 90 bp GGGACAGTGCCGAGGCCTCGGTCTCAGGGACCTAAAGGCAGGCCCTaGTCTTGGCAGCTGGCTTGGGCAGAGGGCCCACCCACCACACAG +
Preference number: 5 (lower is better)
Translates to: GTVPRPRSQGPKGRP*SWQLAWAEGPPTTQ
Trigger: CTGTGTGGTGGGTGGGCCCTCTGCCCAAGCCAGCTGCCAAGAGCAGGGCCTGCCTTTAGGTCCCTGAGACCGAGGCCTCGGCACTGTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS CCA 90 bp GGCCTCGGTCTCAGGGACCTAAAGGCAGGCCCTGCTCTTGGCAGCTaGCTTGGGCAGAGGGCCCACCCACCACACAGTCCTAGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: GLGLRDLKAGPALGS*LGQRAHPPHSPRAA
Trigger: GGCAGCCCTAGGACTGTGTGGTGGGTGGGCCCTCTGCCCAAGCCAGCTGCCAAGAGCAGGGCCTGCCTTTAGGTCCCTGAGACCGAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS GCA 90 bp CGCTCTCCTTCAAGCAGGGAGAGCTGGCCCTGGCTCCTGAGCCTTTaGACACCTCCGAGCCGGGCGCACCTTCAGCATCTCCTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: RSPSSRESWPWLLSL*TPPSRAHLQHLLPG
Trigger: GCCAGGCAGGAGATGCTGAAGGTGCGCCCGGCTCGGAGGTGTGCAAAGGCTCAGGAGCCAGGGCCAGCTCTCCCTGCTTGAAGGAGAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS-3UTR CAA 90 bp CAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTCTCACGGGGCAGCGCTaGGAAGGGGCGAGCTCGGCT +
Preference number: 5 (lower is better)
Translates to: QSLSPSIQAWSFPGRAAALTGQR*EGASSA
Trigger: AGCCGAGCTCGCCCCTTCCAAGCGCTGCCCCGTGAG...AGCAGCGGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATCCTTGCACACCTCGACTTaGGCCTTCACCTGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: PGHMGHLASRASHRTQPSLHTST*AFTCPR
Trigger: CCTGGGGCAGGTGAAGGCCAAAGTCGAGGTGTGCAA...GGATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGGGCCGGGCCCACAGGTaGGCCACAGGGAAGGAGCGT +
Preference number: 5 (lower is better)
Translates to: PEARKGREGLSVQRGAFRGRAHR*ATGKER
Trigger: ACGCTCCTTCCCTGTGGCCAACCTGTGGGCCCGGCC...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTGGCCGGGCCCACAGGTaGGCCACAGGGAAGGAGCGT +
Preference number: 5 (lower is better)
Translates to: QSLSPSIQAWSFPGRAAAGRAHR*ATGKER
Trigger: ACGCTCCTTCCCTGTGGCCAACCTGTGGGCCCGGCC...AGCAGCGGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp ATCGCACACCCACCCATAGGGGCCACCAGTCGAGAAGCAAGCTGGGCACCAGGCTCCCCTGCCCCGGCCTaGAAGCATGGCTGTGTGCAC +
Preference number: 5 (lower is better)
Translates to: IAHPPIGATSREASWAPGSPAPA*KHGCVH
Trigger: GTGCACACAGCCATGCTTCAAGGCCGGGGCAGGGGA...GCCTGGTGCCCAGCTTGCTTCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS TCA 90 bp GACACACTCGCTCTCCTTCAAGCAGGGAGAGCTGGCCCTGGCTCCTaGGCCTTTGCACACCTCCGAGCCGGGCGCACCTTCAGCATCTCC +
Preference number: 5 (lower is better)
Translates to: DTLALLQAGRAGPGS*AFAHLRAGRTFSIS
Trigger: GGAGATGCTGAAGGTGCGCCCGGCTCGGAGGTGTGCAAAGGCTCAGGAGCCAGGGCCAGCTCTCCCTGCTTGAAGGAGAGCGAGTGTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS GCA 90 bp CACACCTCCGAGCCGGGCGCACCTTCAGCATCTCCTGCCTGGCCCTaGCTTGCACTTTGGCCATCTCCCTACAAGCCACATAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: HTSEPGAPSASPAWP*LALWPSPYKPHSWA
Trigger: GGCCCAGCTATGTGGCTTGTAGGGAGATGGCCAAAGTGCAAGGCAGGGCCAGGCAGGAGATGCTGAAGGTGCGCCCGGCTCGGAGGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS GCA 90 bp CCTCCTGCTCAGGGAAGTTTCCCACCCCCGGGCCAGAGTGGGGCTTaGCTTCTCTCCCTCCGTCACAGCCAAGGACCATGCACAGCAAGG +
Preference number: 5 (lower is better)
Translates to: PPAQGSFPPPGQSGA*LLSLRHSQGPCTAR
Trigger: CCTTGCTGTGCATGGTCCTTGGCTGTGACGGAGGGAGAGAAGGCAAGCCCCACTCTGGCCCGGGGGTGGGAAACTTCCCTGAGCAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS GCA 90 bp CTTCCCGTCTTAGGCCAGCCCCAAGGGTGCTGTGGTTCCTCGGGATaGCAGAGCTCCCCCAAGCTGTGGCTGTGCCTGGCTGGGACCTTT +
Preference number: 5 (lower is better)
Translates to: LPVLGQPQGCCGSSG*QSSPKLWLCLAGTF
Trigger: AAAGGTCCCAGCCAGGCACAGCCACAGCTTGGGGGAGCTCTGGCATCCCGAGGAACCACAGCACCCTTGGGGCTGGCCTAAGACGGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS CCA 90 bp CACCTCCCTCACACGTCCACGGTGCACAGGGGCTCACCGCCAGGCTaGGCGGACGCCACAATGGACATCTTGGGCTTCTTTCGAGTCTCC +
Preference number: 5 (lower is better)
Translates to: HLPHTSTVHRGSPPG*ADATMDILGFFRVS
Trigger: GGAGACTCGAAAGAAGCCCAAGATGTCCATTGTGGCGTCCGCCCAGCCTGGCGGTGAGCCCCTGTGCACCGTGGACGTGTGAGGGAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000475941.1
ENST00000495826.5
ENST00000498171.5
CDS CCA 90 bp GTGCAGGCAGGACGGCTGCCAGTCCGCCTTAGGCTGAACGTGTGGTaGCCAGCACACACAGCTGGGCTCAGGGACAATGCCAGGGCAACA +
Preference number: 5 (lower is better)
Translates to: VQAGRLPVRLRLNVW*PAHTAGLRDNARAT
Trigger: TGTTGCCCTGGCATTGTCCCTGAGCCCAGCTGTGTGTGCTGGCCACCACACGTTCAGCCTAAGGCGGACTGGCAGCCGTCCTGCCTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491892.1
CDS-3UTR CAA 90 bp GGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATGGCTGCACCAGGGCCAGCCTTaGAGCACACCCTGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: GAFQGEPLLHMCAVWPWLHQGQP*STPWCL
Trigger: GAGGCACCAGGGTGTGCTCAAAGGCTGGCCCTGGTG...CAGCCATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS GCA 90 bp ATCCTTAAGCAACTTAAGGTCAGGGGAGAACTTCCGGACCGCAGGTaGGTGCCGGGCGGTGCGCGGGCTGTGGCCACTACAGTTCGGGTC +
Preference number: 5 (lower is better)
Translates to: ILKQLKVRGELPDRR*VPGGARAVATTVRV
Trigger: GACCCGAACTGTAGTGGCCACAGCCCGCGCACCGCCCGGCACGCACCTGCGGTCCGGAAGTTCTCCCCTGACCTTAAGTTGCTTAAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000457069.1
ENST00000495826.5
CDS GCA 90 bp GACAGGGCTAAGGAGCAGACCGCACTCCGCCCGCACGTCGCGCTCTaGTCCTGTGTACAGCACCTTCCTGTCCTTACTCCTGCAGCTCTC +
Preference number: 5 (lower is better)
Translates to: DRAKEQTALRPHVAL*SCVQHLPVLTPAAL
Trigger: GAGAGCTGCAGGAGTAAGGACAGGAAGGTGCTGTACACAGGAGCAGAGCGCGACGTGCGGGCGGAGTGCGGTCTGCTCCTTAGCCCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000495826.5
CDS GCA 90 bp GCTGCCAGGCCTTTCTGCCCACACCACGCCACTTATATGGCCTCCTaGCATGGGCAGAGTAGGGAGGTGAGGTGCTCGTGGTGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: AARPFCPHHATYMAS*HGQSREVRCSWCPE
Trigger: CTCTGGGCACCACGAGCACCTCACCTCCCTACTCTGCCCATGGCAGGAGGCCATATAAGTGGCGTGGTGTGGGCAGAAAGGCCTGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS-3UTR CAA 90 bp ATCGCACACCCACCCATAGGGGCCACCAGTCGAGAAGCAAGCTGGGCACCAGGCTTGCACACCTCGACTTaGGCCTTCACCTGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: IAHPPIGATSREASWAPGLHTST*AFTCPR
Trigger: CCTGGGGCAGGTGAAGGCCAAAGTCGAGGTGTGCAA...GCCTGGTGCCCAGCTTGCTTCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp GCCCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATAAAGACCCCCAGTTCTaGACATGTGGGTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: ALGTWATWHHGPATGLSHKDPQF*TCGCSS
Trigger: GCTGCTGCACCCACATGTCAAGAACTGGGGGTCTTT...ATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCGGCCGGGCCCACAGGTaGGCCACAGGGAAGGAGCGT +
Preference number: 5 (lower is better)
Translates to: LGTARHSEAPQPLGEHMCGRAHR*ATGKER
Trigger: ACGCTCCTTCCCTGTGGCCAACCTGTGGGCCCGGCC...GCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp ATCGCACACCCACCCATAGGGGCCACCAGTCGAGAAGCAAGCTGGGCACCAGGCGGCAGGACGTCATCCTaGCTGGCATCGTGTCCAGAC +
Preference number: 5 (lower is better)
Translates to: IAHPPIGATSREASWAPGGRTSS*LASCPD
Trigger: GTCTGGACACGATGCCAGCAAGGATGACGTCCTGCC...GCCTGGTGCCCAGCTTGCTTCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp GCCCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATCATGTGCACGAAGCTTaGGTTCACAGGCGCATCTGG +
Preference number: 5 (lower is better)
Translates to: ALGTWATWHHGPATGLSHHVHEA*VHRRIW
Trigger: CCAGATGCGCCTGTGAACCAAAGCTTCGTGCACATG...ATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CCGGCAGGAACACATTTCCATCGCACACCCACCCATAGGGGCCACCAGTCGAGATCCCCTGCCCCGGCCTaGAAGCATGGCTGTGTGCAC +
Preference number: 5 (lower is better)
Translates to: PAGTHFHRTPTHRGHQSRSPAPA*KHGCVH
Trigger: GTGCACACAGCCATGCTTCAAGGCCGGGGCAGGGGA...TCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGATGGAAATGTGTTCCTGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS GCA 90 bp TTAAGCAACTTAAGGTCAGGGGAGAACTTCCGGACCGCAGGTGCGTaGCGGGCGGTGCGCGGGCTGTGGCCACTACAGTTCGGGTCTATG +
Preference number: 5 (lower is better)
Translates to: LSNLRSGENFRTAGA*RAVRGLWPLQFGSM
Trigger: CATAGACCCGAACTGTAGTGGCCACAGCCCGCGCACCGCCCGGCACGCACCTGCGGTCCGGAAGTTCTCCCCTGACCTTAAGTTGCTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000457069.1
ENST00000495826.5
CDS GCA 90 bp TCCCGCCAAGACGCACACCTCCAGAAACAGGGAGCAGCAGGATTCTaGTGGCTGTTCGAGGAGGAGGGCCTTTCCTCCTGCCACAGGGAC +
Preference number: 5 (lower is better)
Translates to: SRQDAHLQKQGAAGF*WLFEEEGLSSCHRD
Trigger: GTCCCTGTGGCAGGAGGAAAGGCCCTCCTCCTCGAACAGCCAGCAGAATCCTGCTGCTCCCTGTTTCTGGAGGTGTGCGTCTTGGCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491892.1
CDS CCA 90 bp CCACGGTGCACAGGGGCTCACCGCCAGGCTGGGCGGACGCCACAATaGACATCTTGGGCTTCTTTCGAGTCTCCTCCCTTTCCTCAGCTA +
Preference number: 5 (lower is better)
Translates to: PRCTGAHRQAGRTPQ*TSWASFESPPFPQL
Trigger: TAGCTGAGGAAAGGGAGGAGACTCGAAAGAAGCCCAAGATGTCCATTGTGGCGTCCGCCCAGCCTGGCGGTGAGCCCCTGTGCACCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000475941.1
ENST00000495826.5
ENST00000498171.5
CDS-3UTR CAA 90 bp TGCACGATGCATGACTGCTGGTCTCCTCAGAAGTGCGGCTGGCGGCCCCCGCGCTCTGTTCGCCTCTTTTaGGGGGCACAAAGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: CTMHDCWSPQKCGWRPPRSVRLF*GAQRPS
Trigger: AGAAGGCCTTTGTGCCCCCAAAAAGAGGCGAACAGA...GCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp TGCACGATGCATGACTGCTGGTCTCCTCAGAAGTGCGGCTGGCGGCCCCCGCGCTGCTTTCCAACTCTCTaGTTCTTACACCACCCGCGC +
Preference number: 5 (lower is better)
Translates to: CTMHDCWSPQKCGWRPPRCFPTL*FLHHPR
Trigger: GCGCGGGTGGTGTAAGAACAAGAGAGTTGGAAAGCA...GCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp TGCACGATGCATGACTGCTGGTCTCCTCAGAAGTGCGGCTGGCGGCCCCCGCGCTCCGATGTCTCCTGCTaGACCATCTTGCTGCTCTCA +
Preference number: 5 (lower is better)
Translates to: CTMHDCWSPQKCGWRPPRSDVSC*TILLLS
Trigger: TGAGAGCAGCAAGATGGTCAAGCAGGAGACATCGGA...GCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp TGCACGATGCATGACTGCTGGTCTCCTCAGAAGTGCGGCTGGCGGCCCCCGCGCCTGAGGATGTGCAGGTaGGGCTTGTTCTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: CTMHDCWSPQKCGWRPPRLRMCR*GLFFLA
Trigger: TGCCAAGAAGAACAAGCCCAACCTGCACATCCTCAG...GCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS TCA 90 bp AGGAATACGCTCCAGGGTGGCAGCACAGGCTGCCCTGGGACCTGCTaGTGGCCAGTTACCTGCTTGACCATCTTGCTGCTCTCACGGCCA +
Preference number: 5 (lower is better)
Translates to: RNTLQGGSTGCPGTC*WPVTCLTILLLSRP
Trigger: TGGCCGTGAGAGCAGCAAGATGGTCAAGCAGGTAACTGGCCATCAGCAGGTCCCAGGGCAGCCTGTGCTGCCACCCTGGAGCGTATTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495351.1
CDS GCA 90 bp TCACCACCAGAGCCAACGTCCATTACCTCTGCACCACTGGACGTTTaGAGGGGAGGTGGTGGAGACTGCTCACGGGGCAGCGCTTGGAAG +
Preference number: 5 (lower is better)
Translates to: SPPEPTSITSAPLDV*RGGGGDCSRGSAWK
Trigger: CTTCCAAGCGCTGCCCCGTGAGCAGTCTCCACCACCTCCCCTGCAAACGTCCAGTGGTGCAGAGGTAATGGACGTTGGCTCTGGTGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000457069.1
ENST00000495826.5
CDS CCA 90 bp ACTGTCCATCACCACCAGAGCCAACGTCCATTACCTCTGCACCACTaGACGTTTGCAGGGGAGGTGGTGGAGACTGCTCACGGGGCAGCG +
Preference number: 5 (lower is better)
Translates to: TVHHHQSQRPLPLHH*TFAGEVVETAHGAA
Trigger: CGCTGCCCCGTGAGCAGTCTCCACCACCTCCCCTGCAAACGTCCAGTGGTGCAGAGGTAATGGACGTTGGCTCTGGTGGTGATGGACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000457069.1
ENST00000495826.5
CDS CCA 90 bp CGCCAAGACGCACACCTCCAGAAACAGGGAGCAGCAGGATTCTGCTaGCTGTTCGAGGAGGAGGGCCTTTCCTCCTGCCACAGGGACAAG +
Preference number: 5 (lower is better)
Translates to: RQDAHLQKQGAAGFC*LFEEEGLSSCHRDK
Trigger: CTTGTCCCTGTGGCAGGAGGAAAGGCCCTCCTCCTCGAACAGCCAGCAGAATCCTGCTGCTCCCTGTTTCTGGAGGTGTGCGTCTTGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491892.1
CDS-3UTR CAA 90 bp CCAGCTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCTGCACCACTGGACGTTaGCAGGGGAGGTGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: PAATGAVAESIHSGLELSCTTGR*QGRWWR
Trigger: TCTCCACCACCTCCCCTGCAAACGTCCAGTGGTGCA...GGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp GGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATGGTGAGGTCACTGCTTaGCTCCCGTTCCTCGTTGTC +
Preference number: 5 (lower is better)
Translates to: GLELSRESRCSTCVLCGHGEVTA*LPFLVV
Trigger: GACAACGAGGAACGGGAGCAAAGCAGTGACCTCACC...ATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp ATCGCACACCCACCCATAGGGGCCACCAGTCGAGAAGCAAGCTGGGCACCAGGCCATTTCCCGATTGAATaGCCGCCGCTCAGCCCAAGT +
Preference number: 5 (lower is better)
Translates to: IAHPPIGATSREASWAPGHFPIE*PPLSPS
Trigger: ACTTGGGCTGAGCGGCGGCAATTCAATCGGGAAATG...GCCTGGTGCCCAGCTTGCTTCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGCCGCGCACTGTGTGCTaGCCACACGCCATGACGTAT +
Preference number: 5 (lower is better)
Translates to: PEARKGREGLSVQRGAFRPRTVC*PHAMTY
Trigger: ATACGTCATGGCGTGTGGCAAGCACACAGTGCGCGG...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CCTGGGCACATGGGCCACCTGGCATCACGGGCCAGCCACAGGACTCAGCCATCCATGTGCAGGTTGGGCTaGTTCTTCTTGGCATACTGC +
Preference number: 5 (lower is better)
Translates to: PGHMGHLASRASHRTQPSMCRLG*FFLAYC
Trigger: GCAGTATGCCAAGAAGAACAAGCCCAACCTGCACAT...GGATGGCTGAGTCCTGTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACCAGGGCCAGCCTTaGAGCACACCCTGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: PGNSKTQRGSPTFRGTHVHQGQP*STPWCL
Trigger: GAGGCACCAGGGTGTGCTCAAAGGCTGGCCCTGGTG...CACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS TCA 90 bp GGCAGACACGAAACAGCCAGGAGCTGTGGCAACATAACTGCATGCTaGCTGGCCCGCCTCAGTGATGCCAGGCCCACTGACAGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: GRHETARSCGNITAC*LARLSDARPTDSSR
Trigger: TCTGCTGCTGTCAGTGGGCCTGGCATCACTGAGGCGGGCCAGTCAGCATGCAGTTATGTTGCCACAGCTCCTGGCTGTTTCGTGTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS GCA 90 bp AACATGCACAAGTCCGCTGAGACCCGGGCGCGTCCTGCCGCGCTGTaGGCTGGCGGCTTAGTCAAGCTGGCCACATTGCTCTTTTCATTA +
Preference number: 5 (lower is better)
Translates to: NMHKSAETRARPAAL*AGGLVKLATLLFSL
Trigger: TAATGAAAAGAGCAATGTGGCCAGCTTGACTAAGCCGCCAGCGCACAGCGCGGCAGGACGCGCCCGGGTCTCAGCGGACTTGTGCATGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000457069.1
CDS CCA 90 bp ACAGGGGCTCACCGCCAGGCTGGGCGGACGCCACAATGGACATCTTaGGCTTCTTTCGAGTCTCCTCCCTTTCCTCAGCTAGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: TGAHRQAGRTPQWTS*ASFESPPFPQLASS
Trigger: TGAAGAGGCTAGCTGAGGAAAGGGAGGAGACTCGAAAGAAGCCCAAGATGTCCATTGTGGCGTCCGCCCAGCCTGGCGGTGAGCCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000475941.1
ENST00000495826.5
ENST00000498171.5
CDS CCA 90 bp ACAGAGCCTCAGGAATACGCTCCAGGGTGGCAGCACAGGCTGCCCTaGGACCTGCTGATGGCCAGTTACCTGCTTGACCATCTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: TEPQEYAPGWQHRLP*DLLMASYLLDHLAA
Trigger: AGCAGCAAGATGGTCAAGCAGGTAACTGGCCATCAGCAGGTCCCAGGGCAGCCTGTGCTGCCACCCTGGAGCGTATTCCTGAGGCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495351.1
CDS-3UTR CAA 90 bp GTAGGGGGCATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTTGCTTCAGAGGTGAGGTCACTGCTTaGCTCCCGTTCCTCGTTGTC +
Preference number: 5 (lower is better)
Translates to: VGGMVGDRHGRTLDSCFRGEVTA*LPFLVV
Trigger: GACAACGAGGAACGGGAGCAAAGCAGTGACCTCACC...TCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCATGCCCCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp GGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATGGCTGCATTTCCCGATTGAATaGCCGCCGCTCAGCCCAAGT +
Preference number: 5 (lower is better)
Translates to: GAFQGEPLLHMCAVWPWLHFPIE*PPLSPS
Trigger: ACTTGGGCTGAGCGGCGGCAATTCAATCGGGAAATG...CAGCCATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CCTGCTGTGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTCGCTTCATTTCCCGATaGAATTGCCGCCGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PAVVVPGNSKTQRGSPTFRFISR*NCRRSA
Trigger: GGCTGAGCGGCGGCAATTCAATCGGGAAATGAAGCG...AAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTCGCTTCATTTCCCGATaGAATTGCCGCCGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: QSLSPSIQAWSFPGRAAARFISR*NCRRSA
Trigger: GGCTGAGCGGCGGCAATTCAATCGGGAAATGAAGCG...AGCAGCGGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp GGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATGGCTGTCCTGCTTGACCATCTaGCTGCTCTCACGGCCATAC +
Preference number: 5 (lower is better)
Translates to: GAFQGEPLLHMCAVWPWLSCLTI*LLSRPY
Trigger: GTATGGCCGTGAGAGCAGCAAGATGGTCAAGCAGGA...CAGCCATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp ATCGCACACCCACCCATAGGGGCCACCAGTCGAGAAGCAAGCTGGGCACCAGGCATCTCCTCTTGGAGCTaGCTGAGGATGTGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: IAHPPIGATSREASWAPGISSWS*LRMCRL
Trigger: CAACCTGCACATCCTCAGCAAGCTCCAAGAGGAGAT...GCCTGGTGCCCAGCTTGCTTCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp GAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAGGCCACCAGGGCCAGCCTTaGAGCACACCCTGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: EAPQPLGEHMCTKLWFTGHQGQP*STPWCL
Trigger: GAGGCACCAGGGTGTGCTCAAAGGCTGGCCCTGGTG...GCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS GCA 90 bp GAGTTCGGACTGTCCATCACCACCAGAGCCAACGTCCATTACCTCTaGACCACTGGACGTTTGCAGGGGAGGTGGTGGAGACTGCTCACG +
Preference number: 5 (lower is better)
Translates to: EFGLSITTRANVHYL*TTGRLQGRWWRLLT
Trigger: CGTGAGCAGTCTCCACCACCTCCCCTGCAAACGTCCAGTGGTGCAGAGGTAATGGACGTTGGCTCTGGTGGTGATGGACAGTCCGAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000457069.1
ENST00000495826.5
CDS CCA 90 bp ACCACCCGAGACTCTCTGTGTAGGTACACCGGGACTCCAGAGTTATaGAATGTCATGATCCACCCGTCGGGCAGCGGCTCTGTAGGTGGG +
Preference number: 5 (lower is better)
Translates to: TTRDSLCRYTGTPEL*NVMIHPSGSGSVGG
Trigger: CCCACCTACAGAGCCGCTGCCCGACGGGTGGATCATGACATTCCATAACTCTGGAGTCCCGGTGTACCTACACAGAGAGTCTCGGGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000495826.5
ENST00000498171.5
CDS-3UTR CAA 90 bp GGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATGGCTGTCTGTTCGCCTCTTTTaGGGGGCACAAAGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: GAFQGEPLLHMCAVWPWLSVRLF*GAQRPS
Trigger: AGAAGGCCTTTGTGCCCCCAAAAAGAGGCGAACAGA...CAGCCATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCCGCGCACTGTGTGCTaGCCACACGCCATGACGTAT +
Preference number: 5 (lower is better)
Translates to: PGNSKTQRGSPTFRGTHVPRTVC*PHAMTY
Trigger: ATACGTCATGGCGTGTGGCAAGCACACAGTGCGCGG...CACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAAAGACCCCCAGTTCTaGACATGTGGGTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LPLVQSLSPSIQAWSFPGKDPQF*TCGCSS
Trigger: GCTGCTGCACCCACATGTCAAGAACTGGGGGTCTTT...CCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp GGAGCTTTCCAGGGAGAGCCGCTGCTCCACATGTGTGCTGTGTGGCCATGGCTGGACCACCTTGATGGTTaGCCTCCAATCCCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: GAFQGEPLLHMCAVWPWLDHLDG*PPIPES
Trigger: GCTTTCTGGGATTGGAGGCAAACCATCAAGGTGGTC...CAGCCATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGTGGAGAGGGACCACCTaGATGGTTTGCCTCCAATCC +
Preference number: 5 (lower is better)
Translates to: LPLVQSLSPSIQAWSFPGWRGTT*MVCLQS
Trigger: GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCA...CCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTTGGAGAGGGACCACCTaGATGGTTTGCCTCCAATCC +
Preference number: 5 (lower is better)
Translates to: QSLSPSIQAWSFPGRAAAWRGTT*MVCLQS
Trigger: GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCA...AGCAGCGGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCGGCAGGACGTCATCCTaGCTGGCATCGTGTCCAGAC +
Preference number: 5 (lower is better)
Translates to: LGTARHSEAPQPLGEHMCGRTSS*LASCPD
Trigger: GTCTGGACACGATGCCAGCAAGGATGACGTCCTGCC...GCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp GTAGGGGGCATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTTGCTTCAGAACCAGGCAGCTGCCTTaGACATCCAGAGAAACCGCT +
Preference number: 5 (lower is better)
Translates to: VGGMVGDRHGRTLDSCFRTRQLP*TSRETA
Trigger: AGCGGTTTCTCTGGATGTCAAAGGCAGCTGCCTGGT...TCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCATGCCCCCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTCATGTGCACGAAGCTTaGGTTCACAGGCGCATCTGG +
Preference number: 5 (lower is better)
Translates to: QSLSPSIQAWSFPGRAAAHVHEA*VHRRIW
Trigger: CCAGATGCGCCTGTGAACCAAAGCTTCGTGCACATG...AGCAGCGGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS TCA 90 bp ACCACGCCACTTATATGGCCTCCTGCCATGGGCAGAGTAGGGAGGTaGGGTGCTCGTGGTGCCCAGAGTCCTCATCAAGGAGTGAAACCA +
Preference number: 5 (lower is better)
Translates to: TTPLIWPPAMGRVGR*GARGAQSPHQGVKP
Trigger: TGGTTTCACTCCTTGATGAGGACTCTGGGCACCACGAGCACCTCACCTCCCTACTCTGCCCATGGCAGGAGGCCATATAAGTGGCGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS TCA 90 bp CTACCCGTATGCTTCCCGTTCCCAAGAAGTATGGCCTGGACCAGGTaGCCACCCGAGACTCTCTGTGTAGGTACACCGGGACTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: LPVCFPFPRSMAWTR*PPETLCVGTPGLQS
Trigger: ACTCTGGAGTCCCGGTGTACCTACACAGAGAGTCTCGGGTGGTCACCTGGTCCAGGCCATACTTCTTGGGAACGGGAAGCATACGGGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498171.5
CDS GCA 90 bp GCCACTTATATGGCCTCCTGCCATGGGCAGAGTAGGGAGGTGAGGTaGTCGTGGTGCCCAGAGTCCTCATCAAGGAGTGAAACCAGAGTG +
Preference number: 5 (lower is better)
Translates to: ATYMASCHGQSREVR*SWCPESSSRSETRV
Trigger: CACTCTGGTTTCACTCCTTGATGAGGACTCTGGGCACCACGAGCACCTCACCTCCCTACTCTGCCCATGGCAGGAGGCCATATAAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS CCA 90 bp TATATGGCCTCCTGCCATGGGCAGAGTAGGGAGGTGAGGTGCTCGTaGTGCCCAGAGTCCTCATCAAGGAGTGAAACCAGAGTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: YMASCHGQSREVRCS*CPESSSRSETRVWP
Trigger: TGGCCACACTCTGGTTTCACTCCTTGATGAGGACTCTGGGCACCACGAGCACCTCACCTCCCTACTCTGCCCATGGCAGGAGGCCATATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS-3UTR CAA 90 bp TGCACGATGCATGACTGCTGGTCTCCTCAGAAGTGCGGCTGGCGGCCCCCGCGCCCACTGCCTCAATTATaGGAAATCACAATGCACTCA +
Preference number: 5 (lower is better)
Translates to: CTMHDCWSPQKCGWRPPRPLPQL*EITMHS
Trigger: TGAGTGCATTGTGATTTCCAATAATTGAGGCAGTGG...GCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351989.8
ENST00000383024.6
CDS-3UTR CAA 90 bp CTGGCATCGTGTCCAGACTGGAGAGGGACCACCTTGATGGTTTGCCTCCAATCCGGTGAGGTCACTGCTTaGCTCCCGTTCCTCGTTGTC +
Preference number: 5 (lower is better)
Translates to: LASCPDWRGTTLMVCLQSGEVTA*LPFLVV
Trigger: GACAACGAGGAACGGGAGCAAAGCAGTGACCTCACC...GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCTGGACACGATGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp TGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAAAAAGACCCCCAGTTCTaGACATGTGGGTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: WWCLGTARHSEAPQPLGEKDPQF*TCGCSS
Trigger: GCTGCTGCACCCACATGTCAAGAACTGGGGGTCTTT...TTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp GTAGGGGGCATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTTGCTTCAGACTGAGGATGTGCAGGTaGGGCTTGTTCTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: VGGMVGDRHGRTLDSCFRLRMCR*GLFFLA
Trigger: TGCCAAGAAGAACAAGCCCAACCTGCACATCCTCAG...TCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCATGCCCCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CCAGCTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCATCTCCTCTTGGAGCTaGCTGAGGATGTGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: PAATGAVAESIHSGLELSISSWS*LRMCRL
Trigger: CAACCTGCACATCCTCAGCAAGCTCCAAGAGGAGAT...GGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCAGGGAGAGCCGCTGCTGACCACCTTGATGGTTaGCCTCCAATCCCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: QSLSPSIQAWSFPGRAAADHLDG*PPIPES
Trigger: GCTTTCTGGGATTGGAGGCAAACCATCAAGGTGGTC...AGCAGCGGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGCAACAGAAGCCAACCTaGGTCACACAGGTAGTGAGG +
Preference number: 5 (lower is better)
Translates to: PEARKGREGLSVQRGAFRQQKPT*VTQVVR
Trigger: CCTCACTACCTGTGTGACCAAGGTTGGCTTCTGTTG...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS TCA 90 bp GTTTCCGTATGCTTCCCGTTCCCAAGAAGTATGGCCTGGACCAGGTaGCCACCCGAGACTCTCTGTGTAGGTACACCGGGACTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: VSVCFPFPRSMAWTR*PPETLCVGTPGLQS
Trigger: ACTCTGGAGTCCCGGTGTACCTACACAGAGAGTCTCGGGTGGTCACCTGGTCCAGGCCATACTTCTTGGGAACGGGAAGCATACGGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000495826.5
CDS TCA 90 bp CCCTGGCGCTCATGCTCCTGCAACAGGAGAGCTCAACAGCATTCCTaGGAACAGACACAGAAAGGAGGTGCTCTCAGGGGGCCTAGATGT +
Preference number: 5 (lower is better)
Translates to: PWRSCSCNRRAQQHS*EQTQKGGALRGPRC
Trigger: ACATCTAGGCCCCCTGAGAGCACCTCCTTTCTGTGTCTGTTCTCAGGAATGCTGTTGAGCTCTCCTGTTGCAGGAGCATGAGCGCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495826.5
ENST00000498171.5
CDS GCA 90 bp AGACCAGAGTTTTACAAGCCCTCACATAAATCTACACAGCTAACATaGACAAGTCCGCTGAGACCCGGGCGCGTCCTGCCGCGCTGTGCG +
Preference number: 5 (lower is better)
Translates to: RPEFYKPSHKSTQLT*TSPLRPGRVLPRCA
Trigger: CGCACAGCGCGGCAGGACGCGCCCGGGTCTCAGCGGACTTGTGCATGTTAGCTGTGTAGATTTATGTGAGGGCTTGTAAAACTCTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000457069.1
ENST00000495826.5
CDS-3UTR CAA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGTCAACGGATTCATCTTaGCACACCTCGACTTTGGCC +
Preference number: 5 (lower is better)
Translates to: PEARKGREGLSVQRGAFRSTDSS*HTSTLA
Trigger: GGCCAAAGTCGAGGTGTGCAAAGATGAATCCGTTGA...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CCTGCTGTGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTTCAACGGATTCATCTTaGCACACCTCGACTTTGGCC +
Preference number: 5 (lower is better)
Translates to: PAVVVPGNSKTQRGSPTFSTDSS*HTSTLA
Trigger: GGCCAAAGTCGAGGTGTGCAAAGATGAATCCGTTGA...AAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp ATCGCACACCCACCCATAGGGGCCACCAGTCGAGAAGCAAGCTGGGCACCAGGCACCTCGGATTTCCCGTaGGGGTTAATAACAAACTCT +
Preference number: 5 (lower is better)
Translates to: IAHPPIGATSREASWAPGTSDFP*GLITNS
Trigger: AGAGTTTGTTATTAACCCCAACGGGAAATCCGAGGT...GCCTGGTGCCCAGCTTGCTTCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCTCCTGCTTGACCATCTaGCTGCTCTCACGGCCATAC +
Preference number: 5 (lower is better)
Translates to: LGTARHSEAPQPLGEHMCSCLTI*LLSRPY
Trigger: GTATGGCCGTGAGAGCAGCAAGATGGTCAAGCAGGA...GCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGTTGGGCTTGTTCTTCTaGGCATACTGCTGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: PEARKGREGLSVQRGAFRLGLFF*AYCCSS
Trigger: TGAGCTGCAGCAGTATGCCAAGAAGAACAAGCCCAA...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGATGTGCAGGTTGGGCTaGTTCTTCTTGGCATACTGC +
Preference number: 5 (lower is better)
Translates to: PEARKGREGLSVQRGAFRMCRLG*FFLAYC
Trigger: GCAGTATGCCAAGAAGAACAAGCCCAACCTGCACAT...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CCAGCTGCCACTGGTGCAGTCGCTGAGTCCATCCATTCAGGCCTGGAGCTTTCCATGTGCAGGTTGGGCTaGTTCTTCTTGGCATACTGC +
Preference number: 5 (lower is better)
Translates to: PAATGAVAESIHSGLELSMCRLG*FFLAYC
Trigger: GCAGTATGCCAAGAAGAACAAGCCCAACCTGCACAT...GGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGACTGCACCAGTGGCAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS GCA 90 bp CCAGCTCATTCTCCTCATCCTTCTTATCAGCACTCTCACCCCCTATaGCTACCCCGTCACCAACACTCCCGCCAAAGGGACAAGCATGCA +
Preference number: 5 (lower is better)
Translates to: PAHSPHPSYQHSHPL*LPRHQHSRQRDKHA
Trigger: TGCATGCTTGTCCCTTTGGCGGGAGTGTTGGTGACGGGGTAGGCATAGGGGGTGAGAGTGCTGATAAGAAGGATGAGGAGAATGAGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000495826.5
CDS GCA 90 bp CCCCATGTTACCCTCCACCCCTCAGGAGTGGGCACTGGCTTACACTaGAGGATGTTGGCCACAACAGCAGAAACAAGACAGATGGTACAC +
Preference number: 5 (lower is better)
Translates to: PHVTLHPSGVGTGLH*RMLATTAETRQMVH
Trigger: GTGTACCATCTGTCTTGTTTCTGCTGTTGTGGCCAACATCCTGCAGTGTAAGCCAGTGCCCACTCCTGAGGGGTGGAGGGTAACATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS GCA 90 bp CACCAGGCAGCAGAGAAGGAGTCCTTACACCACCCGCGCACTGTGTaGTTGCCACACGCCATGACGTATTCACTCTTCTGGTTTTTCCCA +
Preference number: 5 (lower is better)
Translates to: HQAAEKESLHHPRTV*LPHAMTYSLFWFFP
Trigger: TGGGAAAAACCAGAAGAGTGAATACGTCATGGCGTGTGGCAAGCACACAGTGCGCGGGTGGTGTAAGGACTCCTTCTCTGCTGCCTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491892.1
CDS GCA 90 bp AGGACAACCCGAGAGTCTGAAACTCTGATGCCTTTCACCGGCCTCTaGTTGGCTGCGGTGCCATGTGTGTGGATGTGCACGTTTTGGTCT +
Preference number: 5 (lower is better)
Translates to: RTTRESETLMPFTGL*LAAVPCVWMCTFWS
Trigger: AGACCAAAACGTGCACATCCACACACATGGCACCGCAGCCAAGCAGAGGCCGGTGAAAGGCATCAGAGTTTCAGACTCTCGGGTTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498171.5
CDS CCA 90 bp ACACTCACCTCCCCATGTTACCCTCCACCCCTCAGGAGTGGGCACTaGCTTACACTGCAGGATGTTGGCCACAACAGCAGAAACAAGACA +
Preference number: 5 (lower is better)
Translates to: TLTSPCYPPPLRSGH*LTLQDVGHNSRNKT
Trigger: TGTCTTGTTTCTGCTGTTGTGGCCAACATCCTGCAGTGTAAGCCAGTGCCCACTCCTGAGGGGTGGAGGGTAACATGGGGAGGTGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS-3UTR CAA 90 bp GTAGGGGGCATGGTGGGGGACAGACACGGCAGAACGCTGGACTCTTGCTTCAGAGGAACCACTTCAAACTaGATAGACGTGTCACCCATC +
Preference number: 5 (lower is better)
Translates to: VGGMVGDRHGRTLDSCFRGTTSN*IDVSPI
Trigger: GATGGGTGACACGTCTATCAAGTTTGAAGTGGTTCC...TCTGAAGCAAGAGTCCAGCGTTCTGCCGTGTCTGTCCCCCACCATGCCCCCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp AGAACGCTGGACTCTTGCTTCAGATGGCGCACCACAAGCACACGGCACTCTGCACTGAGGATGTGCAGGTaGGGCTTGTTCTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: RTLDSCFRWRTTSTRHSALRMCR*GLFFLA
Trigger: TGCCAAGAAGAACAAGCCCAACCTGCACATCCTCAG...TGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp TCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTGGCAGGACGTCATCCTaGCTGGCATCGTGTCCAGAC +
Preference number: 5 (lower is better)
Translates to: SRETAVTGNSSGSRMGYTGRTSS*LASCPD
Trigger: GTCTGGACACGATGCCAGCAAGGATGACGTCCTGCC...AGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp GAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAGGCACCAGGCAGCTGCCTTaGACATCCAGAGAAACCGCT +
Preference number: 5 (lower is better)
Translates to: EAPQPLGEHMCTKLWFTGTRQLP*TSRETA
Trigger: AGCGGTTTCTCTGGATGTCAAAGGCAGCTGCCTGGT...GCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS TCA 90 bp CTGCTTGGCTGCGGTGCCATGTGTGTGGATGTGCACGTTTTGGTCTaGGAACTTACAAGCCTAAAGTCACGACTGATGCCTCCCCTACCC +
Preference number: 5 (lower is better)
Translates to: LLGCGAMCVDVHVLV*ELTSLKSRLMPPLP
Trigger: GGGTAGGGGAGGCATCAGTCGTGACTTTAGGCTTGTAAGTTCTCAGACCAAAACGTGCACATCCACACACATGGCACCGCAGCCAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498171.5
CDS GCA 90 bp CGGCCACGACTTTTGAGCACTGTTTTAATCTTGGTCATCATCGGCTaGACACTTGTCTCTCCATCGGACGGATGGTCGCTGTCTCCGCCA +
Preference number: 5 (lower is better)
Translates to: RPRLLSTVLILVIIG*TLVSPSDGWSLSPP
Trigger: TGGCGGAGACAGCGACCATCCGTCCGATGGAGAGACAAGTGTGCAGCCGATGATGACCAAGATTAAAACAGTGCTCAAAAGTCGTGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000495826.5
ENST00000498171.5
CDS GCA 90 bp AGGCCTTCTTCCAGCAGAGCATCCACATCGTTGTCAAAGTCATCCTaGAAAACACGCTGTTCAGACACCAGAGCCCCTGGCGCTCATGCT +
Preference number: 5 (lower is better)
Translates to: RPSSSRASTSLSKSS*KTRCSDTRAPGAHA
Trigger: AGCATGAGCGCCAGGGGCTCTGGTGTCTGAACAGCGTGTTTTGCAGGATGACTTTGACAACGATGTGGATGCTCTGCTGGAAGAAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495826.5
ENST00000498171.5
CDS CCA 90 bp ACCCATCCCATGGTTTCTTTTAAGGCACTCGTGGAGGATCTGATATaGAGACAACAGCCCAGCCTTGCTGGTCAGCTCGTAGACCCGCGA +
Preference number: 5 (lower is better)
Translates to: THPMVSFKALVEDLI*RQQPSLAGQLVDPR
Trigger: TCGCGGGTCTACGAGCTGACCAGCAAGGCTGGGCTGTTGTCTCCATATCAGATCCTCCACGAGTGCCTTAAAAGAAACCATGGGATGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000491892.1
ENST00000495351.1
ENST00000495826.5
ENST00000498171.5
CDS CCA 90 bp AGGGTGGCACTCACCCTTTCCTCAGCTAGCCTCTTCATCTCCTCTTaGAGCTTGCTGAGGATGTGCAGGTTGGGCTTGTTCTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: RVALTLSSASLFISS*SLLRMCRLGLFFLA
Trigger: TGCCAAGAAGAACAAGCCCAACCTGCACATCCTCAGCAAGCTCCAAGAGGAGATGAAGAGGCTAGCTGAGGAAAGGGTGAGTGCCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485802.1
CDS-3UTR CAA 90 bp AGGCAGCTGCCTTTGACATCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCTGTTCGCCTCTTTTaGGGGGCACAAAGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: RQLPLTSRETAVTGNSSGSVRLF*GAQRPS
Trigger: AGAAGGCCTTTGTGCCCCCAAAAAGAGGCGAACAGA...TCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGATGTCAAAGGCAGCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CCTGCTGTGGTGGTGCCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTACCTCGGATTTCCCGTaGGGGTTAATAACAAACTCT +
Preference number: 5 (lower is better)
Translates to: PAVVVPGNSKTQRGSPTFTSDFP*GLITNS
Trigger: AGAGTTTGTTATTAACCCCAACGGGAAATCCGAGGT...AAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGAGCTCAATCACACTCTaGTCCGATGTCTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: PGNSKTQRGSPTFRGTHVSSITL*SDVSCL
Trigger: CAAGCAGGAGACATCGGACAAGAGTGTGATTGAGCT...CACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACGCCACAATGGACATCTaGGGCTTCTTTCGAGTCTCC +
Preference number: 5 (lower is better)
Translates to: QRGSPTFRGTHVHEALVHATMDI*GFFRVS
Trigger: GGAGACTCGAAAGAAGCCCAAGATGTCCATTGTGGC...GTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp TCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTCAGAACGCTGGACTCTaGCTTCAGATGGCGCACCAC +
Preference number: 5 (lower is better)
Translates to: SRETAVTGNSSGSRMGYTQNAGL*LQMAHH
Trigger: GTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCTG...AGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS TCA 90 bp TGCTGCTCTCACGGCCATACATGCGCAGTAAAGACCCCCAGTTCTTaGCATGTGGGTGCAGCAGCTGAAGGATCTTCTGTGAGGCTAACT +
Preference number: 5 (lower is better)
Translates to: CCSHGHTCAVKTPSS*HVGAAAEGSSVRLT
Trigger: AGTTAGCCTCACAGAAGATCCTTCAGCTGCTGCACCCACATGTCAAGAACTGGGGGTCTTTACTGCGCATGTATGGCCGTGAGAGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000485802.1
ENST00000495351.1
ENST00000495826.5
ENST00000498171.5
CDS TCA 90 bp CCTCCCTTTCCTCAGCTAGCCTCTTCATCTCCTCTTGGAGCTTGCTaGGGATGTGCAGGTTGGGCTTGTTCTTCTTGGCATACTGCTGCA +
Preference number: 5 (lower is better)
Translates to: PPFPQLASSSPLGAC*GCAGWACSSWHTAA
Trigger: TGCAGCAGTATGCCAAGAAGAACAAGCCCAACCTGCACATCCTCAGCAAGCTCCAAGAGGAGATGAAGAGGCTAGCTGAGGAAAGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000475941.1
ENST00000495826.5
ENST00000498171.5
CDS TCA 90 bp AGGGTGCATGATCATCTGAAAAACAAACAGGATGAAGCTACCAGCTaGCACCAACACACCTGGTCCAGGGGCACACACTGCCAAGGAGCG +
Preference number: 5 (lower is better)
Translates to: RVHDHLKNKQDEATS*HQHTWSRGTHCQGA
Trigger: CGCTCCTTGGCAGTGTGTGCCCCTGGACCAGGTGTGTTGGTGTCAGCTGGTAGCTTCATCCTGTTTGTTTTTCAGATGATCATGCACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495826.5
CDS CCA 90 bp CCCTCCACCCCTCAGGAGTGGGCACTGGCTTACACTGCAGGATGTTaGCCACAACAGCAGAAACAAGACAGATGGTACACATATGCTCTT +
Preference number: 5 (lower is better)
Translates to: PSTPQEWALAYTAGC*PQQQKQDRWYTYAL
Trigger: AAGAGCATATGTGTACCATCTGTCTTGTTTCTGCTGTTGTGGCCAACATCCTGCAGTGTAAGCCAGTGCCCACTCCTGAGGGGTGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS CCA 90 bp AATGATTACACTCACCTCCCCATGTTACCCTCCACCCCTCAGGAGTaGGCACTGGCTTACACTGCAGGATGTTGGCCACAACAGCAGAAA +
Preference number: 5 (lower is better)
Translates to: NDYTHLPMLPSTPQE*ALAYTAGCWPQQQK
Trigger: TTTCTGCTGTTGTGGCCAACATCCTGCAGTGTAAGCCAGTGCCCACTCCTGAGGGGTGGAGGGTAACATGGGGAGGTGAGTGTAATCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS-3UTR CAA 90 bp CCGGCAGGAACACATTTCCATCGCACACCCACCCATAGGGGCCACCAGTCGAGACCACTGCCTCAATTATaGGAAATCACAATGCACTCA +
Preference number: 5 (lower is better)
Translates to: PAGTHFHRTPTHRGHQSRPLPQL*EITMHS
Trigger: TGAGTGCATTGTGATTTCCAATAATTGAGGCAGTGG...TCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGATGGAAATGTGTTCCTGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351989.8
ENST00000383024.6
CDS-3UTR CAA 90 bp TCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTTCATCGGCTGCACACTaGTCTCTCCATCGGACGGAT +
Preference number: 5 (lower is better)
Translates to: SRETAVTGNSSGSRMGYTSSAAH*SLHRTD
Trigger: ATCCGTCCGATGGAGAGACAAGTGTGCAGCCGATGA...AGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp GAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAGGCGGGCGGCCACGACTTTaGAGCACTGTTTTAATCTTG +
Preference number: 5 (lower is better)
Translates to: EAPQPLGEHMCTKLWFTGGRPRL*STVLIL
Trigger: CAAGATTAAAACAGTGCTCAAAAGTCGTGGCCGCCC...GCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp GCTAAGGGCAACAGTCACAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCACGCTTCATTTCCCGATaGAATTGCCGCCGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: AKGNSHSQMTIHSCRQEARFISR*NCRRSA
Trigger: GGCTGAGCGGCGGCAATTCAATCGGGAAATGAAGCG...TGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGCGGAACCACTTCAAACTaGATAGACGTGTCACCCATC +
Preference number: 5 (lower is better)
Translates to: LGTARHSEAPQPLGEHMCGTTSN*IDVSPI
Trigger: GATGGGTGACACGTCTATCAAGTTTGAAGTGGTTCC...GCACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp GAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAGGCAGCTCAATCACACTCTaGTCCGATGTCTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: EAPQPLGEHMCTKLWFTGSSITL*SDVSCL
Trigger: CAAGCAGGAGACATCGGACAAGAGTGTGATTGAGCT...GCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp TTGGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGTCAAATGACTACCAGGCAGCTGCCTTaGACATCCAGAGAAACCGCT +
Preference number: 5 (lower is better)
Translates to: LVHRRIWLAKGNSHSQMTTRQLP*TSRETA
Trigger: AGCGGTTTCTCTGGATGTCAAAGGCAGCTGCCTGGT...AGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS TCA 90 bp AGGAGTCCTTACACCACCCGCGCACTGTGTGCTTGCCACACGCCATaGCGTATTCACTCTTCTGGTTTTTCCCAGGAACCACTTCAAACT +
Preference number: 5 (lower is better)
Translates to: RSPYTTRALCACHTP*RIHSSGFSQEPLQT
Trigger: AGTTTGAAGTGGTTCCTGGGAAAAACCAGAAGAGTGAATACGTCATGGCGTGTGGCAAGCACACAGTGCGCGGGTGGTGTAAGGACTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491892.1
CDS TCA 90 bp TCACCCTTTCCTCAGCTAGCCTCTTCATCTCCTCTTGGAGCTTGCTaGGGATGTGCAGGTTGGGCTTGTTCTTCTTGGCATACTGCTGCA +
Preference number: 5 (lower is better)
Translates to: SPFPQLASSSPLGAC*GCAGWACSSWHTAA
Trigger: TGCAGCAGTATGCCAAGAAGAACAAGCCCAACCTGCACATCCTCAGCAAGCTCCAAGAGGAGATGAAGAGGCTAGCTGAGGAAAGGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485802.1
CDS GCA 90 bp AGCTTGCTGAGGATGTGCAGGTTGGGCTTGTTCTTCTTGGCATACTaGTGCAGCTCAATCACACTCTTGTCCGATGTCTCCTGCTTGACC +
Preference number: 5 (lower is better)
Translates to: SLLRMCRLGLFFLAY*CSSITLLSDVSCLT
Trigger: GGTCAAGCAGGAGACATCGGACAAGAGTGTGATTGAGCTGCAGCAGTATGCCAAGAAGAACAAGCCCAACCTGCACATCCTCAGCAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000485802.1
ENST00000495826.5
ENST00000498171.5
CDS CCA 90 bp CCGCGCACTGTGTGCTTGCCACACGCCATGACGTATTCACTCTTCTaGTTTTTCCCAGGAACCACTTCAAACTTGATAGACGTGTCACCC +
Preference number: 5 (lower is better)
Translates to: PRTVCLPHAMTYSLF*FFPGTTSNLIDVSP
Trigger: GGGTGACACGTCTATCAAGTTTGAAGTGGTTCCTGGGAAAAACCAGAAGAGTGAATACGTCATGGCGTGTGGCAAGCACACAGTGCGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000485802.1
ENST00000491892.1
ENST00000495351.1
ENST00000498171.5
CDS CCA 90 bp TTTCGAGTCTCCTCCCTTTCCTCAGCTAGCCTCTTCATCTCCTCTTaGAGCTTGCTGAGGATGTGCAGGTTGGGCTTGTTCTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: FRVSSLSSASLFISS*SLLRMCRLGLFFLA
Trigger: TGCCAAGAAGAACAAGCCCAACCTGCACATCCTCAGCAAGCTCCAAGAGGAGATGAAGAGGCTAGCTGAGGAAAGGGAGGAGACTCGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000475941.1
ENST00000495826.5
ENST00000498171.5
CDS-3UTR CAA 90 bp TCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTTCCGATGTCTCCTGCTaGACCATCTTGCTGCTCTCA +
Preference number: 5 (lower is better)
Translates to: SRETAVTGNSSGSRMGYTSDVSC*TILLLS
Trigger: TGAGAGCAGCAAGATGGTCAAGCAGGAGACATCGGA...AGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp TCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTGCCACAATGGACATCTaGGGCTTCTTTCGAGTCTCC +
Preference number: 5 (lower is better)
Translates to: SRETAVTGNSSGSRMGYTATMDI*GFFRVS
Trigger: GGAGACTCGAAAGAAGCCCAAGATGTCCATTGTGGC...AGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS TCA 90 bp GTGCTCTCAGGGGGCCTAGATGTGCCCTTAGGGTGCATGATCATCTaGAAAACAAACAGGATGAAGCTACCAGCTGACACCAACACACCT +
Preference number: 5 (lower is better)
Translates to: VLSGGLDVPLGCMII*KTNRMKLPADTNTP
Trigger: AGGTGTGTTGGTGTCAGCTGGTAGCTTCATCCTGTTTGTTTTTCAGATGATCATGCACCCTAAGGGCACATCTAGGCCCCCTGAGAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495826.5
CDS GCA 90 bp TTGCTGAGGATGTGCAGGTTGGGCTTGTTCTTCTTGGCATACTGCTaGAGCTCAATCACACTCTTGTCCGATGTCTCCTGCTTGACCATC +
Preference number: 5 (lower is better)
Translates to: LLRMCRLGLFFLAYC*SSITLLSDVSCLTI
Trigger: GATGGTCAAGCAGGAGACATCGGACAAGAGTGTGATTGAGCTGCAGCAGTATGCCAAGAAGAACAAGCCCAACCTGCACATCCTCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000485802.1
ENST00000495826.5
ENST00000498171.5
CDS GCA 90 bp AGCTTGCTGAGGATGTGCAGGTTGGGCTTGTTCTTCTTGGCATACTaGTGCAGCTCAATCACACTCTTGTCCGATGTCTCCTGGGAAGTA +
Preference number: 5 (lower is better)
Translates to: SLLRMCRLGLFFLAY*CSSITLLSDVSWEV
Trigger: TACTTCCCAGGAGACATCGGACAAGAGTGTGATTGAGCTGCAGCAGTATGCCAAGAAGAACAAGCCCAACCTGCACATCCTCAGCAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS CCA 90 bp ATCTTGGTCATCATCGGCTGCACACTTGTCTCTCCATCGGACGGATaGTCGCTGTCTCCGCCATATTTTTCCTCTGTTCGCCTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: ILVIIGCTLVSPSDG*SLSPPYFSSVRLFL
Trigger: CAAAAAGAGGCGAACAGAGGAAAAATATGGCGGAGACAGCGACCATCCGTCCGATGGAGAGACAAGTGTGCAGCCGATGATGACCAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000495826.5
ENST00000498171.5
CDS-3UTR CAA 90 bp GACAGTTTGCTTTATGTGTTCAGACAATCAAGGCTCGCCTTCCAGGCACAGCCCGGGCGGCCACGACTTTaGAGCACTGTTTTAATCTTG +
Preference number: 5 (lower is better)
Translates to: DSLLYVFRQSRLAFQAQPGRPRL*STVLIL
Trigger: CAAGATTAAAACAGTGCTCAAAAGTCGTGGCCGCCC...GGGCTGTGCCTGGAAGGCGAGCCTTGATTGTCTGAACACATAAAGCAAACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp TTGGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGTCAAATGACTGGGCGGCCACGACTTTaGAGCACTGTTTTAATCTTG +
Preference number: 5 (lower is better)
Translates to: LVHRRIWLAKGNSHSQMTGRPRL*STVLIL
Trigger: CAAGATTAAAACAGTGCTCAAAAGTCGTGGCCGCCC...AGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp GACAGTTTGCTTTATGTGTTCAGACAATCAAGGCTCGCCTTCCAGGCACAGCCCTCAACGGATTCATCTTaGCACACCTCGACTTTGGCC +
Preference number: 5 (lower is better)
Translates to: DSLLYVFRQSRLAFQAQPSTDSS*HTSTLA
Trigger: GGCCAAAGTCGAGGTGTGCAAAGATGAATCCGTTGA...GGGCTGTGCCTGGAAGGCGAGCCTTGATTGTCTGAACACATAAAGCAAACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCAAGACAGAAGCAAGTGTCCATTTCCCGATTGAATaGCCGCCGCTCAGCCCAAGT +
Preference number: 5 (lower is better)
Translates to: QSNDYSQLQTGGKTEASVHFPIE*PPLSPS
Trigger: ACTTGGGCTGAGCGGCGGCAATTCAATCGGGAAATG...GACACTTGCTTCTGTCTTGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp GAGGCTCCCCAACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAGGCCACCAAAAGGCTCACTaGGGTTCTCACATTCAAAGA +
Preference number: 5 (lower is better)
Translates to: EAPQPLGEHMCTKLWFTGHQKAH*GSHIQR
Trigger: TCTTTGAATGTGAGAACCCAAGTGAGCCTTTTGGTG...GCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGGTTGGGGAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000351989.8
CDS-3UTR CAA 90 bp CCTGGGAACAGCAAGACACAGCGAGGCTCCCCAACCTTTAGGGGAACACATGTGTTCTTCGCAAGTTTTTaGCTGCTTGCAGTTCCAGAT +
Preference number: 5 (lower is better)
Translates to: PGNSKTQRGSPTFRGTHVFFASF*LLAVPD
Trigger: ATCTGGAACTGCAAGCAGCAAAAAACTTGCGAAGAA...CACATGTGTTCCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000351989.8
CDS-3UTR CAA 90 bp TCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTAGCTCAATCACACTCTaGTCCGATGTCTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: SRETAVTGNSSGSRMGYTSSITL*SDVSCL
Trigger: CAAGCAGGAGACATCGGACAAGAGTGTGATTGAGCT...AGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp TTGGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGTCAAATGACTTTGGGCTTGTTCTTCTaGGCATACTGCTGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: LVHRRIWLAKGNSHSQMTLGLFF*AYCCSS
Trigger: TGAGCTGCAGCAGTATGCCAAGAAGAACAAGCCCAA...AGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CCGGAGGCCAGGAAAGGCAGAGAGGGCCTCAGTGTCCAAAGAGGCGCTTTTAGGTTTCAACAAGTCCACTaGCTAAAATGCATGATTCCA +
Preference number: 5 (lower is better)
Translates to: PEARKGREGLSVQRGAFRFQQVH*LKCMIP
Trigger: TGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAA...CCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS TCA 90 bp CACTTGGGTTCTCACATTCAAAGAAATTATAGACAGGGCGGACCTTaGGGACACGCTGCATGTACTCGTGCAGGATGCAGACCTCGGATT +
Preference number: 5 (lower is better)
Translates to: HLGSHIQRNYRQGGP*GHAACTRAGCRPRI
Trigger: AATCCGAGGTCTGCATCCTGCACGAGTACATGCAGCGTGTCCTCAAGGTCCGCCCTGTCTATAATTTCTTTGAATGTGAGAACCCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000495826.5
ENST00000498171.5
CDS TCA 90 bp TCTTGTTCTTACACCACCCGCGCACTGTGTGCTTGCCACACGCCATaGCGTATTCACTCTTCTGGTTTTTCCCAGGAACCACTTCAAACT +
Preference number: 5 (lower is better)
Translates to: SCSYTTRALCACHTP*RIHSSGFSQEPLQT
Trigger: AGTTTGAAGTGGTTCCTGGGAAAAACCAGAAGAGTGAATACGTCATGGCGTGTGGCAAGCACACAGTGCGCGGGTGGTGTAAGAACAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000485802.1
ENST00000495351.1
ENST00000498171.5
CDS TCA 90 bp ATGCGCAGTAAAGACCCCCAGTTCTTGACATGTGGGTGCAGCAGCTaGAGGATCTTCTGTGAGGCTAACTGCTTTCCAACTCTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: MRSKDPQFLTCGCSS*RIFCEANCFPTLLF
Trigger: GAACAAGAGAGTTGGAAAGCAGTTAGCCTCACAGAAGATCCTTCAGCTGCTGCACCCACATGTCAAGAACTGGGGGTCTTTACTGCGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000485802.1
ENST00000495351.1
ENST00000495826.5
ENST00000498171.5
CDS TCA 90 bp AAATTGCAATATGGATTACAAGGACAACCCGAGAGTCTGAAACTCTaGTGCCTTTCACCGGCCTCTGCTTGGCTGCGGTGCCATGTGTGT +
Preference number: 5 (lower is better)
Translates to: KLQYGLQGQPESLKL*CLSPASAWLRCHVC
Trigger: ACACACATGGCACCGCAGCCAAGCAGAGGCCGGTGAAAGGCATCAGAGTTTCAGACTCTCGGGTTGTCCTTGTAATCCATATTGCAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498171.5
CDS GCA 90 bp CCCGTTCCTCGTTGTCCTTCATTTTCTTATAATGCAGACAAGGGATaGTACTCAGAGGAGGGTCGTGTTTCCGTATGCTTCCCGTTCCCA +
Preference number: 5 (lower is better)
Translates to: PVPRCPSFSYNADKG*YSEEGRVSVCFPFP
Trigger: TGGGAACGGGAAGCATACGGAAACACGACCCTCCTCTGAGTAGCATCCCTTGTCTGCATTATAAGAAAATGAAGGACAACGAGGAACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000495826.5
CDS GCA 90 bp AGGATGTTGGCCACAACAGCAGAAACAAGACAGATGGTACACATATaGTCTTCTGTTAGAGATGGACCGGCACTGGTACCAGGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: RMLATTAETRQMVHI*SSVRDGPALVPGRA
Trigger: AGCTCTCCCTGGTACCAGTGCCGGTCCATCTCTAACAGAAGAGCATATGTGTACCATCTGTCTTGTTTCTGCTGTTGTGGCCAACATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS GCA 90 bp ACATTTCAACTTGCTTCCCAAAAATCTCTCTCAAGTTCCTTAACATaGCCTGGTGGCCCGTGTGAGCCCCCTCACCCTCCCTTATCATGT +
Preference number: 5 (lower is better)
Translates to: TFQLASQKSLSSSLT*PGGPCEPPHPPLSC
Trigger: ACATGATAAGGGAGGGTGAGGGGGCTCACACGGGCCACCAGGGCATGTTAAGGAACTTGAGAGAGATTTTTGGGAAGCAAGTTGAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS-3UTR CAA 90 bp TCCAGAGAAACCGCTGTCACAGGCAACAGCTCTGGATCAAGAATGGGCTACACTGGAACCACTTCAAACTaGATAGACGTGTCACCCATC +
Preference number: 5 (lower is better)
Translates to: SRETAVTGNSSGSRMGYTGTTSN*IDVSPI
Trigger: GATGGGTGACACGTCTATCAAGTTTGAAGTGGTTCC...AGTGTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp GCTAAGGGCAACAGTCACAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCATTGGGCTTGTTCTTCTaGGCATACTGCTGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: AKGNSHSQMTIHSCRQEALGLFF*AYCCSS
Trigger: TGAGCTGCAGCAGTATGCCAAGAAGAACAAGCCCAA...TGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTGTGACTGTTGCCCTTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCAAGACAGAAGCAAGTGTCATCTCCTCTTGGAGCTaGCTGAGGATGTGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: QSNDYSQLQTGGKTEASVISSWS*LRMCRL
Trigger: CAACCTGCACATCCTCAGCAAGCTCCAAGAGGAGAT...GACACTTGCTTCTGTCTTGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CAGTCAAATGACTATTCACAGCTGCAGACAGGAGGCAAGACAGAAGCAAGTGTCCAACAGAAGCCAACCTaGGTCACACAGGTAGTGAGG +
Preference number: 5 (lower is better)
Translates to: QSNDYSQLQTGGKTEASVQQKPT*VTQVVR
Trigger: CCTCACTACCTGTGTGACCAAGGTTGGCTTCTGTTG...GACACTTGCTTCTGTCTTGCCTCCTGTCTGCAGCTGTGAATAGTCATTTGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAATTCATGAAAGCCTTCTCCCCTGCCCCGGCCTaGAAGCATGGCTGTGTGCAC +
Preference number: 5 (lower is better)
Translates to: QASCVVSAYYILKFMKAFSPAPA*KHGCVH
Trigger: GTGCACACAGCCATGCTTCAAGGCCGGGGCAGGGGA...GAAGGCTTTCATGAATTTTAGTATGTAATACGCACTGACGACACATGATGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS TCA 90 bp AACCACTGCCTCAATTATTGGAAATCACAATGCACTCAGCTTAAGTaGCTGGCGACTAAGCGAGTCTGTCTTCATGCCGGAGTGGCACCT +
Preference number: 5 (lower is better)
Translates to: NHCLNYWKSQCTQLK*LATKRVCLHAGVAP
Trigger: AGGTGCCACTCCGGCATGAAGACAGACTCGCTTAGTCGCCAGTCACTTAAGCTGAGTGCATTGTGATTTCCAATAATTGAGGCAGTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000457069.1
CDS CCA 90 bp GCTTACACTGCAGGATGTTGGCCACAACAGCAGAAACAAGACAGATaGTACACATATGCTCTTCTGTTAGAGATGGACCGGCACTGGTAC +
Preference number: 5 (lower is better)
Translates to: AYTAGCWPQQQKQDR*YTYALLLEMDRHWY
Trigger: GTACCAGTGCCGGTCCATCTCTAACAGAAGAGCATATGTGTACCATCTGTCTTGTTTCTGCTGTTGTGGCCAACATCCTGCAGTGTAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS GCA 90 bp CCATGCACAGCAAGGGCAGAAGCAAGTGCTACCTACATTTCAACTTaGTTCCCAAAAATCTCTCTCAAGTTCCTTAACATGCCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: PCTARAEASATYIST*FPKISLKFLNMPWW
Trigger: CCACCAGGGCATGTTAAGGAACTTGAGAGAGATTTTTGGGAAGCAAGTTGAAATGTAGGTAGCACTTGCTTCTGCCCTTGCTGTGCATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS CCA 90 bp ACTGCCTCAATTATTGGAAATCACAATGCACTCAGCTTAAGTGACTaGCGACTAAGCGAGTCTGTCTTCATGCCGGAGTGGCACCTTTCT +
Preference number: 5 (lower is better)
Translates to: TASIIGNHNALSLSD*RLSESVFMPEWHLS
Trigger: AGAAAGGTGCCACTCCGGCATGAAGACAGACTCGCTTAGTCGCCAGTCACTTAAGCTGAGTGCATTGTGATTTCCAATAATTGAGGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000457069.1
CDS CCA 90 bp GTTCTTACTGTGTGCTTGCCACACGCCATGACGTATTCACTCTTCTaGTTTTTCCCAGGAACCACTTCAAACTTGATAGACGTGTCACCC +
Preference number: 5 (lower is better)
Translates to: VLTVCLPHAMTYSLF*FFPGTTSNLIDVSP
Trigger: GGGTGACACGTCTATCAAGTTTGAAGTGGTTCCTGGGAAAAACCAGAAGAGTGAATACGTCATGGCGTGTGGCAAGCACACAGTAAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495826.5
CDS-3UTR CAA 90 bp CTCTCATCTGTCATCCAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAATCCTGCTTGACCATCTaGCTGCTCTCACGGCCATAC +
Preference number: 5 (lower is better)
Translates to: LSSVIQASCVVSAYYILKSCLTI*LLSRPY
Trigger: GTATGGCCGTGAGAGCAGCAAGATGGTCAAGCAGGA...TTTTAGTATGTAATACGCACTGACGACACATGATGCTTGGATGACAGATGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAATTCATGAAAGCCTTCCAGAACGCTGGACTCTaGCTTCAGATGGCGCACCAC +
Preference number: 5 (lower is better)
Translates to: QASCVVSAYYILKFMKAFQNAGL*LQMAHH
Trigger: GTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCTG...GAAGGCTTTCATGAATTTTAGTATGTAATACGCACTGACGACACATGATGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS GCA 90 bp CCCGTTCCTCGTTGTCCTTCATTTTCTTATAATGCAGACAAGGGATaGTACTCAGAGGAGGGTCGTGTTTCTGTGGATAGTGAAATTGCA +
Preference number: 5 (lower is better)
Translates to: PVPRCPSFSYNADKG*YSEEGRVSVDSEIA
Trigger: TGCAATTTCACTATCCACAGAAACACGACCCTCCTCTGAGTAGCATCCCTTGTCTGCATTATAAGAAAATGAAGGACAACGAGGAACGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498171.5
CDS-3UTR CAA 90 bp CCTTGCTTCCTGTTTCAACAAGTCCACTTGCTAAAATGCATGATTCCAAATCTATCATCGGCTGCACACTaGTCTCTCCATCGGACGGAT +
Preference number: 5 (lower is better)
Translates to: PCFLFQQVHLLKCMIPNLSSAAH*SLHRTD
Trigger: ATCCGTCCGATGGAGAGACAAGTGTGCAGCCGATGA...TAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAATTCATGAAAGCCTTCTCATCGGCTGCACACTaGTCTCTCCATCGGACGGAT +
Preference number: 5 (lower is better)
Translates to: QASCVVSAYYILKFMKAFSSAAH*SLHRTD
Trigger: ATCCGTCCGATGGAGAGACAAGTGTGCAGCCGATGA...GAAGGCTTTCATGAATTTTAGTATGTAATACGCACTGACGACACATGATGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp AATATCACAAAAGCTTTAAAAATCAATGGGTGGACATATGGACTCGACTGCAAACCGCGCACTGTGTGCTaGCCACACGCCATGACGTAT +
Preference number: 5 (lower is better)
Translates to: NITKALKINGWTYGLDCKPRTVC*PHAMTY
Trigger: ATACGTCATGGCGTGTGGCAAGCACACAGTGCGCGG...TTTGCAGTCGAGTCCATATGTCCACCCATTGATTTTTAAAGCTTTTGTGATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CCTTGCTTCCTGTTTCAACAAGTCCACTTGCTAAAATGCATGATTCCAAATCTATGGAGAGGGACCACCTaGATGGTTTGCCTCCAATCC +
Preference number: 5 (lower is better)
Translates to: PCFLFQQVHLLKCMIPNLWRGTT*MVCLQS
Trigger: GGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCA...TAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp TTGGTTCACAGGCGCATCTGGCTGGCTAAGGGCAACAGTCACAGTCAAATGACTTTTCAACAAGTCCACTaGCTAAAATGCATGATTCCA +
Preference number: 5 (lower is better)
Translates to: LVHRRIWLAKGNSHSQMTFQQVH*LKCMIP
Trigger: TGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAA...AGTCATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS CCA 90 bp TACTCAGAGGAGGGTCGTGTTTCTGTGGATAGTGAAATTGCAATATaGATTACAAGGACAACCCGAGAGTCTGAAACTCTGATGCCTTTC +
Preference number: 5 (lower is better)
Translates to: YSEEGRVSVDSEIAI*ITRTTRESETLMPF
Trigger: GAAAGGCATCAGAGTTTCAGACTCTCGGGTTGTCCTTGTAATCCATATTGCAATTTCACTATCCACAGAAACACGACCCTCCTCTGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498171.5
CDS CCA 90 bp ATAATGCAGACAAGGGATGCTACTCAGAGGAGGGTCGTGTTTCTGTaGATAGTGAAATTGCAATATGGATTACAAGGACAACCCGAGAGT +
Preference number: 5 (lower is better)
Translates to: IMQTRDATQRRVVFL*IVKLQYGLQGQPES
Trigger: ACTCTCGGGTTGTCCTTGTAATCCATATTGCAATTTCACTATCCACAGAAACACGACCCTCCTCTGAGTAGCATCCCTTGTCTGCATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498171.5
CDS-3UTR CAA 90 bp ATGGTTTGCCTCCAATCCCAGAAAGCTAGTTCTGATGCTAAAATTCTGTTTAAGTGCTTTCCAACTCTCTaGTTCTTACACCACCCGCGC +
Preference number: 5 (lower is better)
Translates to: MVCLQSQKASSDAKILFKCFPTL*FLHHPR
Trigger: GCGCGGGTGGTGTAAGAACAAGAGAGTTGGAAAGCA...CTTAAACAGAATTTTAGCATCAGAACTAGCTTTCTGGGATTGGAGGCAAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CAAGCATCATGTGTCGTCAGTGCGTATTACATACTAAAATTCATGAAAGCCTTCTCCGATGTCTCCTGCTaGACCATCTTGCTGCTCTCA +
Preference number: 5 (lower is better)
Translates to: QASCVVSAYYILKFMKAFSDVSC*TILLLS
Trigger: TGAGAGCAGCAAGATGGTCAAGCAGGAGACATCGGA...GAAGGCTTTCATGAATTTTAGTATGTAATACGCACTGACGACACATGATGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp AATATCACAAAAGCTTTAAAAATCAATGGGTGGACATATGGACTCGACTGCAAACAGAACGCTGGACTCTaGCTTCAGATGGCGCACCAC +
Preference number: 5 (lower is better)
Translates to: NITKALKINGWTYGLDCKQNAGL*LQMAHH
Trigger: GTGGTGCGCCATCTGAAGCAAGAGTCCAGCGTTCTG...TTTGCAGTCGAGTCCATATGTCCACCCATTGATTTTTAAAGCTTTTGTGATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp ATGGTTTGCCTCCAATCCCAGAAAGCTAGTTCTGATGCTAAAATTCTGTTTAAGCAACAGAAGCCAACCTaGGTCACACAGGTAGTGAGG +
Preference number: 5 (lower is better)
Translates to: MVCLQSQKASSDAKILFKQQKPT*VTQVVR
Trigger: CCTCACTACCTGTGTGACCAAGGTTGGCTTCTGTTG...CTTAAACAGAATTTTAGCATCAGAACTAGCTTTCTGGGATTGGAGGCAAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CTTGCTAAAATGCATGATTCCAAATCTACCTTCTACTCTCACTGTGAAAGTCTTTGCTTTCCAACTCTCTaGTTCTTACACCACCCGCGC +
Preference number: 5 (lower is better)
Translates to: LAKMHDSKSTFYSHCESLCFPTL*FLHHPR
Trigger: GCGCGGGTGGTGTAAGAACAAGAGAGTTGGAAAGCA...AAGACTTTCACAGTGAGAGTAGAAGGTAGATTTGGAATCATGCATTTTAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CTTGCTAAAATGCATGATTCCAAATCTACCTTCTACTCTCACTGTGAAAGTCTTGACCACCTTGATGGTTaGCCTCCAATCCCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: LAKMHDSKSTFYSHCESLDHLDG*PPIPES
Trigger: GCTTTCTGGGATTGGAGGCAAACCATCAAGGTGGTC...AAGACTTTCACAGTGAGAGTAGAAGGTAGATTTGGAATCATGCATTTTAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CTTGCTAAAATGCATGATTCCAAATCTACCTTCTACTCTCACTGTGAAAGTCTTACCTCGGATTTCCCGTaGGGGTTAATAACAAACTCT +
Preference number: 5 (lower is better)
Translates to: LAKMHDSKSTFYSHCESLTSDFP*GLITNS
Trigger: AGAGTTTGTTATTAACCCCAACGGGAAATCCGAGGT...AAGACTTTCACAGTGAGAGTAGAAGGTAGATTTGGAATCATGCATTTTAGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS-3UTR CAA 90 bp CTTGCTAAAATGCATGATTCCAAATCTACCTTCTACTCTCACTGTGAAAGTCTTTTTCAACAAGTCCACTaGCTAAAATGCATGATTCCA +
Preference number: 5 (lower is better)
Translates to: LAKMHDSKSTFYSHCESLFQQVH*LKCMIP
Trigger: TGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAA...AAGACTTTCACAGTGAGAGTAGAAGGTAGATTTGGAATCATGCATTTTAGCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
CDS CCA 72 bp GTCTCCTCAGAAGTGCGGCTGGCGGCCCCCGCGCCCTaGCCCGTGCCACCTCCCTCACACGTCCACGGTGCA +
Preference number: 6 (lower is better)
Translates to: VSSEVRLAAPAP*PVPPPSHVHGA
Trigger: TGCACCGTGGACGTGTGAGGGAGGTGGCACGGGCCAGGGCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000475941.1
ENST00000495826.5
ENST00000498171.5
CDS GCA 72 bp AGGCACGGGTCCTGGGGTCTGCTGTCCCTCCACAGGTaGCACAGGAATGGCCGTGGCCCGGCAGCCCTCCCG +
Preference number: 6 (lower is better)
Translates to: RHGSWGLLSLHR*HRNGRGPAALP
Trigger: CGGGAGGGCTGCCGGGCCACGGCCATTCCTGTGGCACCTGTGGAGGGACAGCAGACCCCAGGACCCGTGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485802.1
CDS CCA 72 bp CTCTACGGCCTGCCCGCTGCCCAGCAGCTGTGTGCCTaGGACCCTGAAGGCAGGCGCGCCCAGGGTCTGGCA +
Preference number: 6 (lower is better)
Translates to: LYGLPAAQQLCA*DPEGRRAQGLA
Trigger: TGCCAGACCCTGGGCGCGCCTGCCTTCAGGGTCCCAGGCACACAGCTGCTGGGCAGCGGGCAGGCCGTAGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS CCA 72 bp CCGGGAAAGCCTCACCGACCGACCGCCGCAGCCATCTaGAAAGCCTGTCCAGGCTCTCCGGTCGCCGGCACC +
Preference number: 6 (lower is better)
Translates to: PGKPHRPTAAAI*KACPGSPVAGT
Trigger: GGTGCCGGCGACCGGAGAGCCTGGACAGGCTTTCCAGATGGCTGCGGCGGTCGGTCGGTGAGGCTTTCCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351989.8
ENST00000383024.6
CDS GCA 72 bp TTAAGGTCAGGGGAGAACTTCCGGACCGCAGGTGCGTaGCGGGCGGTGCGCGGGCTGTGGCCACTACAGTTC +
Preference number: 6 (lower is better)
Translates to: LRSGENFRTAGA*RAVRGLWPLQF
Trigger: GAACTGTAGTGGCCACAGCCCGCGCACCGCCCGGCACGCACCTGCGGTCCGGAAGTTCTCCCCTGACCTTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000457069.1
ENST00000495826.5
CDS GCA 72 bp CAACTTAAGGTCAGGGGAGAACTTCCGGACCGCAGGTaGGTGCCGGGCGGTGCGCGGGCTGTGGCCACTACA +
Preference number: 6 (lower is better)
Translates to: QLKVRGELPDRR*VPGGARAVATT
Trigger: TGTAGTGGCCACAGCCCGCGCACCGCCCGGCACGCACCTGCGGTCCGGAAGTTCTCCCCTGACCTTAAGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000457069.1
ENST00000495826.5
CDS CAA 90 bp CCTCCGAGCCGGGCGCACCTTCAGCATCTCCTGCCTGGCCCTGCCTaGCACTTTGGCCATCTCCCTACAAGCCACATAGCTGGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: PPSRAHLQHLLPGPA*HFGHLPTSHIAGPS
Trigger: GCTGGGCCCAGCTATGTGGCTTGTAGGGAGATGGCCAAAGTGCAAGGCAGGGCCAGGCAGGAGATGCTGAAGGTGCGCCCGGCTCGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS CAA 90 bp TCGCTCTCCTTCAAGCAGGGAGAGCTGGCCCTGGCTCCTGAGCCTTaGCACACCTCCGAGCCGGGCGCACCTTCAGCATCTCCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: SLSFKQGELALAPEP*HTSEPGAPSASPAW
Trigger: CCAGGCAGGAGATGCTGAAGGTGCGCCCGGCTCGGAGGTGTGCAAAGGCTCAGGAGCCAGGGCCAGCTCTCCCTGCTTGAAGGAGAGCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS GCA 72 bp GCACACCTCCGAGCCGGGCGCACCTTCAGCATCTCCTaGCTGGCCCTGCCTTGCACTTTGGCCATCTCCCTA +
Preference number: 6 (lower is better)
Translates to: AHLRAGRTFSIS*LALPCTLAISL
Trigger: TAGGGAGATGGCCAAAGTGCAAGGCAGGGCCAGGCAGGAGATGCTGAAGGTGCGCCCGGCTCGGAGGTGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS GCA 72 bp TCAAGCAGGGAGAGCTGGCCCTGGCTCCTGAGCCTTTaGACACCTCCGAGCCGGGCGCACCTTCAGCATCTC +
Preference number: 6 (lower is better)
Translates to: SSRESWPWLLSL*TPPSRAHLQHL
Trigger: GAGATGCTGAAGGTGCGCCCGGCTCGGAGGTGTGCAAAGGCTCAGGAGCCAGGGCCAGCTCTCCCTGCTTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS GCA 72 bp CAGGGAAGTTTCCCACCCCCGGGCCAGAGTGGGGCTTaGCTTCTCTCCCTCCGTCACAGCCAAGGACCATGC +
Preference number: 6 (lower is better)
Translates to: QGSFPPPGQSGA*LLSLRHSQGPC
Trigger: GCATGGTCCTTGGCTGTGACGGAGGGAGAGAAGGCAAGCCCCACTCTGGCCCGGGGGTGGGAAACTTCCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS GCA 72 bp TTAGGCCAGCCCCAAGGGTGCTGTGGTTCCTCGGGATaGCAGAGCTCCCCCAAGCTGTGGCTGTGCCTGGCT +
Preference number: 6 (lower is better)
Translates to: LGQPQGCCGSSG*QSSPKLWLCLA
Trigger: AGCCAGGCACAGCCACAGCTTGGGGGAGCTCTGGCATCCCGAGGAACCACAGCACCCTTGGGGCTGGCCTAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS CCA 72 bp TGTGGTTCCTCGGGATGCCAGAGCTCCCCCAAGCTGTaGCTGTGCCTGGCTGGGACCTTTCCCCCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: CGSSGCQSSPKL*LCLAGTFPPPA
Trigger: AGCAGGAGGGGGAAAGGTCCCAGCCAGGCACAGCCACAGCTTGGGGGAGCTCTGGCATCCCGAGGAACCACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS CAA 90 bp CCCTCCTGCTCAGGGAAGTTTCCCACCCCCGGGCCAGAGTGGGGCTaGCCTTCTCTCCCTCCGTCACAGCCAAGGACCATGCACAGCAAG +
Preference number: 6 (lower is better)
Translates to: PSCSGKFPTPGPEWG*PSLPPSQPRTMHSK
Trigger: CTTGCTGTGCATGGTCCTTGGCTGTGACGGAGGGAGAGAAGGCAAGCCCCACTCTGGCCCGGGGGTGGGAAACTTCCCTGAGCAGGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS TCA 72 bp AAGTGCAGGCAGGACGGCTGCCAGTCCGCCTTAGGCTaGACGTGTGGTGGCCAGCACACACAGCTGGGCTCA +
Preference number: 6 (lower is better)
Translates to: KCRQDGCQSALG*TCGGQHTQLGS
Trigger: TGAGCCCAGCTGTGTGTGCTGGCCACCACACGTTCAGCCTAAGGCGGACTGGCAGCCGTCCTGCCTGCACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491892.1
CDS CCA 72 bp CACACGTCCACGGTGCACAGGGGCTCACCGCCAGGCTaGGCGGACGCCACAATGGACATCTTGGGCTTCTTT +
Preference number: 6 (lower is better)
Translates to: HTSTVHRGSPPG*ADATMDILGFF
Trigger: AAAGAAGCCCAAGATGTCCATTGTGGCGTCCGCCCAGCCTGGCGGTGAGCCCCTGTGCACCGTGGACGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000475941.1
ENST00000495826.5
ENST00000498171.5
CDS GCA 72 bp GAGCCAACGTCCATTACCTCTGCACCACTGGACGTTTaGAGGGGAGGTGGTGGAGACTGCTCACGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: EPTSITSAPLDV*RGGGGDCSRGS
Trigger: GCTGCCCCGTGAGCAGTCTCCACCACCTCCCCTGCAAACGTCCAGTGGTGCAGAGGTAATGGACGTTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000457069.1
ENST00000495826.5
CDS GCA 72 bp AAGGAGCAGACCGCACTCCGCCCGCACGTCGCGCTCTaGTCCTGTGTACAGCACCTTCCTGTCCTTACTCCT +
Preference number: 6 (lower is better)
Translates to: KEQTALRPHVAL*SCVQHLPVLTP
Trigger: AGGAGTAAGGACAGGAAGGTGCTGTACACAGGAGCAGAGCGCGACGTGCGGGCGGAGTGCGGTCTGCTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000495826.5
CDS GCA 72 bp GAGCCGGGCGCACCTTCAGCATCTCCTGCCTGGCCCTaGCTTGCACTTTGGCCATCTCCCTACAAGCCACAT +
Preference number: 6 (lower is better)
Translates to: EPGAPSASPAWP*LALWPSPYKPH
Trigger: ATGTGGCTTGTAGGGAGATGGCCAAAGTGCAAGGCAGGGCCAGGCAGGAGATGCTGAAGGTGCGCCCGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS CAA 90 bp CACAGGGGCTCACCGCCAGGCTGGGCGGACGCCACAATGGACATCTaGGGCTTCTTTCGAGTCTCCTCCCTTTCCTCAGCTAGCCTCTTC +
Preference number: 6 (lower is better)
Translates to: HRGSPPGWADATMDI*GFFRVSSLSSASLF
Trigger: GAAGAGGCTAGCTGAGGAAAGGGAGGAGACTCGAAAGAAGCCCAAGATGTCCATTGTGGCGTCCGCCCAGCCTGGCGGTGAGCCCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000475941.1
ENST00000495826.5
ENST00000498171.5
CDS GCA 72 bp CCTTTCTGCCCACACCACGCCACTTATATGGCCTCCTaGCATGGGCAGAGTAGGGAGGTGAGGTGCTCGTGG +
Preference number: 6 (lower is better)
Translates to: PFCPHHATYMAS*HGQSREVRCSW
Trigger: CCACGAGCACCTCACCTCCCTACTCTGCCCATGGCAGGAGGCCATATAAGTGGCGTGGTGTGGGCAGAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS CCA 72 bp ACAGGGGCTCACCGCCAGGCTGGGCGGACGCCACAATaGACATCTTGGGCTTCTTTCGAGTCTCCTCCCTTT +
Preference number: 6 (lower is better)
Translates to: TGAHRQAGRTPQ*TSWASFESPPF
Trigger: AAAGGGAGGAGACTCGAAAGAAGCCCAAGATGTCCATTGTGGCGTCCGCCCAGCCTGGCGGTGAGCCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000475941.1
ENST00000495826.5
ENST00000498171.5
CDS CAA 72 bp AGAGCCAACGTCCATTACCTCTGCACCACTGGACGTTaGCAGGGGAGGTGGTGGAGACTGCTCACGGGGCAG +
Preference number: 6 (lower is better)
Translates to: RANVHYLCTTGR*QGRWWRLLTGQ
Trigger: CTGCCCCGTGAGCAGTCTCCACCACCTCCCCTGCAAACGTCCAGTGGTGCAGAGGTAATGGACGTTGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000457069.1
ENST00000495826.5
CDS CAA 90 bp ATCACCACCAGAGCCAACGTCCATTACCTCTGCACCACTGGACGTTaGCAGGGGAGGTGGTGGAGACTGCTCACGGGGCAGCGCTTGGAA +
Preference number: 6 (lower is better)
Translates to: ITTRANVHYLCTTGR*QGRWWRLLTGQRLE
Trigger: TTCCAAGCGCTGCCCCGTGAGCAGTCTCCACCACCTCCCCTGCAAACGTCCAGTGGTGCAGAGGTAATGGACGTTGGCTCTGGTGGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000457069.1
ENST00000495826.5
CDS TCA 72 bp GAAACAGCCAGGAGCTGTGGCAACATAACTGCATGCTaGCTGGCCCGCCTCAGTGATGCCAGGCCCACTGAC +
Preference number: 6 (lower is better)
Translates to: ETARSCGNITAC*LARLSDARPTD
Trigger: GTCAGTGGGCCTGGCATCACTGAGGCGGGCCAGTCAGCATGCAGTTATGTTGCCACAGCTCCTGGCTGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS TCA 72 bp GCTGCCCTGGGACCTGCTGATGGCCAGTTACCTGCTTaGCCATCTTGCTGCTCTCACGGCCATACATGCGCA +
Preference number: 6 (lower is better)
Translates to: AALGPADGQLPA*PSCCSHGHTCA
Trigger: TGCGCATGTATGGCCGTGAGAGCAGCAAGATGGTCAAGCAGGTAACTGGCCATCAGCAGGTCCCAGGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495351.1
CDS GCA 72 bp CGTGGAGGATCTGATATGGAGACAACAGCCCAGCCTTaGTGGTCAGCTCGTAGACCCGCGAGTCCTCGATGC +
Preference number: 6 (lower is better)
Translates to: RGGSDMETTAQP*WSARRPASPRC
Trigger: GCATCGAGGACTCGCGGGTCTACGAGCTGACCAGCAAGGCTGGGCTGTTGTCTCCATATCAGATCCTCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000491892.1
ENST00000495351.1
ENST00000495826.5
ENST00000498171.5
CDS GCA 72 bp CAGCAGCACCTGCTGCCCCACGCGCTAGATCAGGGATaGAGGGCCTACCCATGGGCCAAACTTTTCATTAGG +
Preference number: 6 (lower is better)
Translates to: QQHLLPHALDQG*RAYPWAKLFIR
Trigger: CCTAATGAAAAGTTTGGCCCATGGGTAGGCCCTGCATCCCTGATCTAGCGCGTGGGGCAGCAGGTGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495826.5
CDS CCA 72 bp CACCGCCAGGCTGGGCGGACGCCACAATGGACATCTTaGGCTTCTTTCGAGTCTCCTCCCTTTCCTCAGCTA +
Preference number: 6 (lower is better)
Translates to: HRQAGRTPQWTS*ASFESPPFPQL
Trigger: TAGCTGAGGAAAGGGAGGAGACTCGAAAGAAGCCCAAGATGTCCATTGTGGCGTCCGCCCAGCCTGGCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000475941.1
ENST00000495826.5
ENST00000498171.5
CDS CAA 72 bp TCACCGCCAGGCTGGGCGGACGCCACAATGGACATCTaGGGCTTCTTTCGAGTCTCCTCCCTTTCCTCAGCT +
Preference number: 6 (lower is better)
Translates to: SPPGWADATMDI*GFFRVSSLSSA
Trigger: AGCTGAGGAAAGGGAGGAGACTCGAAAGAAGCCCAAGATGTCCATTGTGGCGTCCGCCCAGCCTGGCGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000475941.1
ENST00000495826.5
ENST00000498171.5
CDS TCA 72 bp TGCTTCCCGTTCCCAAGAAGTATGGCCTGGACCAGGTaGCCACCCGAGACTCTCTGTGTAGGTACACCGGGA +
Preference number: 6 (lower is better)
Translates to: CFPFPRSMAWTR*PPETLCVGTPG
Trigger: TCCCGGTGTACCTACACAGAGAGTCTCGGGTGGTCACCTGGTCCAGGCCATACTTCTTGGGAACGGGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000495826.5
ENST00000498171.5
CDS GCA 72 bp CTGTCCATCACCACCAGAGCCAACGTCCATTACCTCTaGACCACTGGACGTTTGCAGGGGAGGTGGTGGAGA +
Preference number: 6 (lower is better)
Translates to: LSITTRANVHYL*TTGRLQGRWWR
Trigger: TCTCCACCACCTCCCCTGCAAACGTCCAGTGGTGCAGAGGTAATGGACGTTGGCTCTGGTGGTGATGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000457069.1
ENST00000495826.5
CDS GCA 72 bp ACAGGGCGGACCTTGAGGACACGCTGCATGTACTCGTaGAGGATGCAGACCTCGGATTTCCCGTTGGGGTTA +
Preference number: 6 (lower is better)
Translates to: TGRTLRTRCMYS*RMQTSDFPLGL
Trigger: TAACCCCAACGGGAAATCCGAGGTCTGCATCCTGCACGAGTACATGCAGCGTGTCCTCAAGGTCCGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000495826.5
ENST00000498171.5
CDS GCA 72 bp TGCCATGGGCAGAGTAGGGAGGTGAGGTGCTCGTGGTaGCCAGAGTCCTCATCAAGGAGTGAAACCAGAGTG +
Preference number: 6 (lower is better)
Translates to: CHGQSREVRCSW*PESSSRSETRV
Trigger: CACTCTGGTTTCACTCCTTGATGAGGACTCTGGGCACCACGAGCACCTCACCTCCCTACTCTGCCCATGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS GCA 72 bp CGAGAGTCTGAAACTCTGATGCCTTTCACCGGCCTCTaGTTGGCTGCGGTGCCATGTGTGTGGATGTGCACG +
Preference number: 6 (lower is better)
Translates to: RESETLMPFTGL*LAAVPCVWMCT
Trigger: CGTGCACATCCACACACATGGCACCGCAGCCAAGCAGAGGCCGGTGAAAGGCATCAGAGTTTCAGACTCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498171.5
CDS CCA 72 bp ACTCACCTCCCCATGTTACCCTCCACCCCTCAGGAGTaGGCACTGGCTTACACTGCAGGATGTTGGCCACAA +
Preference number: 6 (lower is better)
Translates to: THLPMLPSTPQE*ALAYTAGCWPQ
Trigger: TTGTGGCCAACATCCTGCAGTGTAAGCCAGTGCCCACTCCTGAGGGGTGGAGGGTAACATGGGGAGGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS CCA 72 bp TCCTGCCATGGGCAGAGTAGGGAGGTGAGGTGCTCGTaGTGCCCAGAGTCCTCATCAAGGAGTGAAACCAGA +
Preference number: 6 (lower is better)
Translates to: SCHGQSREVRCS*CPESSSRSETR
Trigger: TCTGGTTTCACTCCTTGATGAGGACTCTGGGCACCACGAGCACCTCACCTCCCTACTCTGCCCATGGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS GCA 72 bp TCTCCTCATCCTTCTTATCAGCACTCTCACCCCCTATaGCTACCCCGTCACCAACACTCCCGCCAAAGGGAC +
Preference number: 6 (lower is better)
Translates to: SPHPSYQHSHPL*LPRHQHSRQRD
Trigger: GTCCCTTTGGCGGGAGTGTTGGTGACGGGGTAGGCATAGGGGGTGAGAGTGCTGATAAGAAGGATGAGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000495826.5
CDS GCA 72 bp GCAGAGAAGGAGTCCTTACACCACCCGCGCACTGTGTaGTTGCCACACGCCATGACGTATTCACTCTTCTGG +
Preference number: 6 (lower is better)
Translates to: AEKESLHHPRTV*LPHAMTYSLFW
Trigger: CCAGAAGAGTGAATACGTCATGGCGTGTGGCAAGCACACAGTGCGCGGGTGGTGTAAGGACTCCTTCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491892.1
CDS GCA 72 bp AGCCTAAAGTCACGACTGATGCCTCCCCTACCCGTATaGTTCCCGTTCCCAAGAAGTATGGCCTGGACCAGG +
Preference number: 6 (lower is better)
Translates to: SLKSRLMPPLPV*FPFPRSMAWTR
Trigger: CCTGGTCCAGGCCATACTTCTTGGGAACGGGAAGCATACGGGTAGGGGAGGCATCAGTCGTGACTTTAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498171.5
CDS CCA 72 bp GACTCTCTGTGTAGGTACACCGGGACTCCAGAGTTATaGAATGTCATGATCCACCCGTCGGGCAGCGGCTCT +
Preference number: 6 (lower is better)
Translates to: DSLCRYTGTPEL*NVMIHPSGSGS
Trigger: AGAGCCGCTGCCCGACGGGTGGATCATGACATTCCATAACTCTGGAGTCCCGGTGTACCTACACAGAGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000495826.5
ENST00000498171.5
CDS CCA 72 bp CTTGCACTTTGGCCATCTCCCTACAAGCCACATAGCTaGGCCCAGCCTGCGTTCCCAATCACCCACACTTCA +
Preference number: 6 (lower is better)
Translates to: LALWPSPYKPHS*AQPAFPITHTS
Trigger: TGAAGTGTGGGTGATTGGGAACGCAGGCTGGGCCCAGCTATGTGGCTTGTAGGGAGATGGCCAAAGTGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS CCA 72 bp ATCCTGCAAAACACGCTGTTCAGACACCAGAGCCCCTaGCGCTCATGCTCCTGCAACAGGAGAGCTCAACAG +
Preference number: 6 (lower is better)
Translates to: ILQNTLFRHQSP*RSCSCNRRAQQ
Trigger: CTGTTGAGCTCTCCTGTTGCAGGAGCATGAGCGCCAGGGGCTCTGGTGTCTGAACAGCGTGTTTTGCAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495826.5
ENST00000498171.5
CDS CAA 90 bp CAGGCAGCAGAGAAGGAGTCCTTACACCACCCGCGCACTGTGTGCTaGCCACACGCCATGACGTATTCACTCTTCTGGTTTTTCCCAGGA +
Preference number: 6 (lower is better)
Translates to: QAAEKESLHHPRTVC*PHAMTYSLFWFFPG
Trigger: TCCTGGGAAAAACCAGAAGAGTGAATACGTCATGGCGTGTGGCAAGCACACAGTGCGCGGGTGGTGTAAGGACTCCTTCTCTGCTGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491892.1
CDS CAA 90 bp ACAACCCGAGAGTCTGAAACTCTGATGCCTTTCACCGGCCTCTGCTaGGCTGCGGTGCCATGTGTGTGGATGTGCACGTTTTGGTCTGAG +
Preference number: 6 (lower is better)
Translates to: TTRESETLMPFTGLC*AAVPCVWMCTFWSE
Trigger: CTCAGACCAAAACGTGCACATCCACACACATGGCACCGCAGCCAAGCAGAGGCCGGTGAAAGGCATCAGAGTTTCAGACTCTCGGGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498171.5
CDS TCA 72 bp TCTCTCAAGTTCCTTAACATGCCCTGGTGGCCCGTGTaGGCCCCCTCACCCTCCCTTATCATGTCCAGAGTA +
Preference number: 6 (lower is better)
Translates to: SLKFLNMPWWPV*APSPSLIMSRV
Trigger: TACTCTGGACATGATAAGGGAGGGTGAGGGGGCTCACACGGGCCACCAGGGCATGTTAAGGAACTTGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS TCA 72 bp GAGGTGCTCGTGGTGCCCAGAGTCCTCATCAAGGAGTaGAACCAGAGTGTGGCCATAGCCAGTAAGAACAGC +
Preference number: 6 (lower is better)
Translates to: EVLVVPRVLIKE*NQSVAIASKNS
Trigger: GCTGTTCTTACTGGCTATGGCCACACTCTGGTTTCACTCCTTGATGAGGACTCTGGGCACCACGAGCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS CAA 72 bp CTCTCGGACTCCGCCTGCTTCCGCTTCATTTCCCGATaGAATTGCCGCCGCTCAGCCCAAGTCCTGAATTTT +
Preference number: 6 (lower is better)
Translates to: LSDSACFRFISR*NCRRSAQVLNF
Trigger: AAAATTCAGGACTTGGGCTGAGCGGCGGCAATTCAATCGGGAAATGAAGCGGAAGCAGGCGGAGTCCGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000495826.5
ENST00000498171.5
CDS CAA 72 bp GAGTCTGAAACTCTGATGCCTTTCACCGGCCTCTGCTaGGCTGCGGTGCCATGTGTGTGGATGTGCACGTTT +
Preference number: 6 (lower is better)
Translates to: ESETLMPFTGLC*AAVPCVWMCTF
Trigger: AAACGTGCACATCCACACACATGGCACCGCAGCCAAGCAGAGGCCGGTGAAAGGCATCAGAGTTTCAGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498171.5
CDS TCA 72 bp TCATGCTCCTGCAACAGGAGAGCTCAACAGCATTCCTaGGAACAGACACAGAAAGGAGGTGCTCTCAGGGGG +
Preference number: 6 (lower is better)
Translates to: SCSCNRRAQQHS*EQTQKGGALRG
Trigger: CCCCCTGAGAGCACCTCCTTTCTGTGTCTGTTCTCAGGAATGCTGTTGAGCTCTCCTGTTGCAGGAGCATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495826.5
ENST00000498171.5
CDS GCA 72 bp TTTTACAAGCCCTCACATAAATCTACACAGCTAACATaGACAAGTCCGCTGAGACCCGGGCGCGTCCTGCCG +
Preference number: 6 (lower is better)
Translates to: FYKPSHKSTQLT*TSPLRPGRVLP
Trigger: CGGCAGGACGCGCCCGGGTCTCAGCGGACTTGTGCATGTTAGCTGTGTAGATTTATGTGAGGGCTTGTAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000457069.1
ENST00000495826.5
CDS GCA 72 bp CCAACTCTCTTGTTCTTACACCACCCGCGCACTGTGTaGTTGCCACACGCCATGACGTATTCACTCTTCTGG +
Preference number: 6 (lower is better)
Translates to: PTLLFLHHPRTV*LPHAMTYSLFW
Trigger: CCAGAAGAGTGAATACGTCATGGCGTGTGGCAAGCACACAGTGCGCGGGTGGTGTAAGAACAAGAGAGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000485802.1
ENST00000495351.1
ENST00000498171.5
CDS GCA 72 bp TCCAGCAGAGCATCCACATCGTTGTCAAAGTCATCCTaGAAAACACGCTGTTCAGACACCAGAGCCCCTGGC +
Preference number: 6 (lower is better)
Translates to: SSRASTSLSKSS*KTRCSDTRAPG
Trigger: GCCAGGGGCTCTGGTGTCTGAACAGCGTGTTTTGCAGGATGACTTTGACAACGATGTGGATGCTCTGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495826.5
ENST00000498171.5
CDS CCA 72 bp ATCATCGGCTGCACACTTGTCTCTCCATCGGACGGATaGTCGCTGTCTCCGCCATATTTTTCCTCTGTTCGC +
Preference number: 6 (lower is better)
Translates to: IIGCTLVSPSDG*SLSPPYFSSVR
Trigger: GCGAACAGAGGAAAAATATGGCGGAGACAGCGACCATCCGTCCGATGGAGAGACAAGTGTGCAGCCGATGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000495826.5
ENST00000498171.5
CDS CCA 72 bp TCCTCCCTTTCCTCAGCTAGCCTCTTCATCTCCTCTTaGAGCTTGCTGAGGATGTGCAGGTTGGGCTTGTTC +
Preference number: 6 (lower is better)
Translates to: SSLSSASLFISS*SLLRMCRLGLF
Trigger: GAACAAGCCCAACCTGCACATCCTCAGCAAGCTCCAAGAGGAGATGAAGAGGCTAGCTGAGGAAAGGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000475941.1
ENST00000495826.5
ENST00000498171.5
CDS CCA 72 bp CTCACCCTTTCCTCAGCTAGCCTCTTCATCTCCTCTTaGAGCTTGCTGAGGATGTGCAGGTTGGGCTTGTTC +
Preference number: 6 (lower is better)
Translates to: LTLSSASLFISS*SLLRMCRLGLF
Trigger: GAACAAGCCCAACCTGCACATCCTCAGCAAGCTCCAAGAGGAGATGAAGAGGCTAGCTGAGGAAAGGGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485802.1
CDS CAA 72 bp GAGAAGGAGTCCTTACACCACCCGCGCACTGTGTGCTaGCCACACGCCATGACGTATTCACTCTTCTGGTTT +
Preference number: 6 (lower is better)
Translates to: EKESLHHPRTVC*PHAMTYSLFWF
Trigger: AAACCAGAAGAGTGAATACGTCATGGCGTGTGGCAAGCACACAGTGCGCGGGTGGTGTAAGGACTCCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491892.1
CDS CAA 90 bp GTCTCCTCCCTTTCCTCAGCTAGCCTCTTCATCTCCTCTTGGAGCTaGCTGAGGATGTGCAGGTTGGGCTTGTTCTTCTTGGCATACTGC +
Preference number: 6 (lower is better)
Translates to: VSSLSSASLFISSWS*LRMCRLGLFFLAYC
Trigger: GCAGTATGCCAAGAAGAACAAGCCCAACCTGCACATCCTCAGCAAGCTCCAAGAGGAGATGAAGAGGCTAGCTGAGGAAAGGGAGGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000475941.1
ENST00000495826.5
ENST00000498171.5
CDS CAA 90 bp ACCCTCCACCCCTCAGGAGTGGGCACTGGCTTACACTGCAGGATGTaGGCCACAACAGCAGAAACAAGACAGATGGTACACATATGCTCT +
Preference number: 6 (lower is better)
Translates to: TLHPSGVGTGLHCRM*ATTAETRQMVHICS
Trigger: AGAGCATATGTGTACCATCTGTCTTGTTTCTGCTGTTGTGGCCAACATCCTGCAGTGTAAGCCAGTGCCCACTCCTGAGGGGTGGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS CAA 90 bp GCACTCACCCTTTCCTCAGCTAGCCTCTTCATCTCCTCTTGGAGCTaGCTGAGGATGTGCAGGTTGGGCTTGTTCTTCTTGGCATACTGC +
Preference number: 6 (lower is better)
Translates to: ALTLSSASLFISSWS*LRMCRLGLFFLAYC
Trigger: GCAGTATGCCAAGAAGAACAAGCCCAACCTGCACATCCTCAGCAAGCTCCAAGAGGAGATGAAGAGGCTAGCTGAGGAAAGGGTGAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485802.1
CDS TCA 72 bp AGGATCCTTTGGAGAGAAGAGAAGCTCCGTAGAAGTTaGAGGGGTCCTCAGCAGGGAGTTCGGACTGTCCAT +
Preference number: 6 (lower is better)
Translates to: RILWREEKLRRS*RGPQQGVRTVH
Trigger: ATGGACAGTCCGAACTCCCTGCTGAGGACCCCTTCAACTTCTACGGAGCTTCTCTTCTCTCCAAAGGATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000457069.1
ENST00000495826.5
CDS TCA 72 bp CCTCAGCTAGCCTCTTCATCTCCTCTTGGAGCTTGCTaGGGATGTGCAGGTTGGGCTTGTTCTTCTTGGCAT +
Preference number: 6 (lower is better)
Translates to: PQLASSSPLGAC*GCAGWACSSWH
Trigger: ATGCCAAGAAGAACAAGCCCAACCTGCACATCCTCAGCAAGCTCCAAGAGGAGATGAAGAGGCTAGCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000475941.1
ENST00000485802.1
ENST00000495826.5
ENST00000498171.5
CDS GCA 72 bp CAAGGCCTCTTCATCCACTCTGTCTCTCTGAACGATTaGTTTAGCCGTGAACCCGCCTGCTCCTTCTTCATC +
Preference number: 6 (lower is better)
Translates to: QGLFIHSVSLND*FSREPACSFFI
Trigger: GATGAAGAAGGAGCAGGCGGGTTCACGGCTAAAGCAATCGTTCAGAGAGACAGAGTGGATGAAGAGGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000495826.5
CDS GCA 72 bp AGCTTCGAAATTCCTCGAGATCAACGGATTCATCTTTaGACACCTCGACTTTGGCCTTCACCTGCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: SFEIPRDQRIHL*TPRLWPSPAPG
Trigger: CCCTGGGGCAGGTGAAGGCCAAAGTCGAGGTGTGCAAAGATGAATCCGTTGATCTCGAGGAATTTCGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000495826.5
ENST00000498171.5
CDS CCA 72 bp CCTCAGGAGTGGGCACTGGCTTACACTGCAGGATGTTaGCCACAACAGCAGAAACAAGACAGATGGTACACA +
Preference number: 6 (lower is better)
Translates to: PQEWALAYTAGC*PQQQKQDRWYT
Trigger: TGTGTACCATCTGTCTTGTTTCTGCTGTTGTGGCCAACATCCTGCAGTGTAAGCCAGTGCCCACTCCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS CAA 90 bp TCCTCTTGGAGCTTGCTGAGGATGTGCAGGTTGGGCTTGTTCTTCTaGGCATACTGCTGCAGCTCAATCACACTCTTGTCCGATGTCTCC +
Preference number: 6 (lower is better)
Translates to: SSWSLLRMCRLGLFF*AYCCSSITLLSDVS
Trigger: GGAGACATCGGACAAGAGTGTGATTGAGCTGCAGCAGTATGCCAAGAAGAACAAGCCCAACCTGCACATCCTCAGCAAGCTCCAAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000475941.1
ENST00000485802.1
ENST00000495826.5
ENST00000498171.5
CDS TCA 72 bp ATCCCATGGTTTCTTTTAAGGCACTCGTGGAGGATCTaGTATGGAGACAACAGCCCAGCCTTGCTGGTCAGC +
Preference number: 6 (lower is better)
Translates to: IPWFLLRHSWRI*YGDNSPALLVS
Trigger: GCTGACCAGCAAGGCTGGGCTGTTGTCTCCATATCAGATCCTCCACGAGTGCCTTAAAAGAAACCATGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000491892.1
ENST00000495351.1
ENST00000495826.5
ENST00000498171.5
CDS TCA 72 bp GGGCACATTCAAAGAAATTATAGACAGGGCGGACCTTaGGGACACGCTGCATGTACTCGTGCAGGATGCAGA +
Preference number: 6 (lower is better)
Translates to: GHIQRNYRQGGP*GHAACTRAGCR
Trigger: TCTGCATCCTGCACGAGTACATGCAGCGTGTCCTCAAGGTCCGCCCTGTCTATAATTTCTTTGAATGTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383024.6
ENST00000407755.1
CDS TCA 72 bp GATCATCTGAAAAACAAACAGGATGAAGCTACCAGCTaGCACCAACACACCTGGTCCAGGGGCACACACTGC +
Preference number: 6 (lower is better)
Translates to: DHLKNKQDEATS*HQHTWSRGTHC
Trigger: GCAGTGTGTGCCCCTGGACCAGGTGTGTTGGTGTCAGCTGGTAGCTTCATCCTGTTTGTTTTTCAGATGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495826.5
CDS TCA 72 bp GGGGGCCTAGATGTGCCCTTAGGGTGCATGATCATCTaGAAAACAAACAGGATGAAGCTACCAGCTGACACC +
Preference number: 6 (lower is better)
Translates to: GGLDVPLGCMII*KTNRMKLPADT
Trigger: GGTGTCAGCTGGTAGCTTCATCCTGTTTGTTTTTCAGATGATCATGCACCCTAAGGGCACATCTAGGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495826.5
CDS GCA 72 bp ATGTGCAGGTTGGGCTTGTTCTTCTTGGCATACTGCTaGAGCTCAATCACACTCTTGTCCGATGTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: MCRLGLFFLAYC*SSITLLSDVSC
Trigger: GCAGGAGACATCGGACAAGAGTGTGATTGAGCTGCAGCAGTATGCCAAGAAGAACAAGCCCAACCTGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000485802.1
ENST00000495826.5
ENST00000498171.5
CDS GCA 72 bp ATGTGCAGGTTGGGCTTGTTCTTCTTGGCATACTGCTaGAGCTCAATCACACTCTTGTCCGATGTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: MCRLGLFFLAYC*SSITLLSDVSW
Trigger: CCAGGAGACATCGGACAAGAGTGTGATTGAGCTGCAGCAGTATGCCAAGAAGAACAAGCCCAACCTGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS CCA 72 bp TGCTTGCAGTTCCAGATCCGTAAGTCACACCATCAATaGTCACCGAGGCACCAAAAGGCTCACTTGGGTTCT +
Preference number: 6 (lower is better)
Translates to: CLQFQIRKSHHQ*SPRHQKAHLGS
Trigger: AGAACCCAAGTGAGCCTTTTGGTGCCTCGGTGACCATTGATGGTGTGACTTACGGATCTGGAACTGCAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000495826.5
ENST00000498171.5
CDS CAA 72 bp ACTCTCTTGTTCTTACACCACCCGCGCACTGTGTGCTaGCCACACGCCATGACGTATTCACTCTTCTGGTTT +
Preference number: 6 (lower is better)
Translates to: TLLFLHHPRTVC*PHAMTYSLFWF
Trigger: AAACCAGAAGAGTGAATACGTCATGGCGTGTGGCAAGCACACAGTGCGCGGGTGGTGTAAGAACAAGAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000485802.1
ENST00000495351.1
ENST00000498171.5
CDS CAA 72 bp AGCTTGCTGAGGATGTGCAGGTTGGGCTTGTTCTTCTaGGCATACTGCTGCAGCTCAATCACACTCTTGTCC +
Preference number: 6 (lower is better)
Translates to: SLLRMCRLGLFF*AYCCSSITLLS
Trigger: GGACAAGAGTGTGATTGAGCTGCAGCAGTATGCCAAGAAGAACAAGCCCAACCTGCACATCCTCAGCAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000475941.1
ENST00000485802.1
ENST00000495826.5
ENST00000498171.5
CDS CAA 72 bp TCCTCTTGGAGCTTGCTGAGGATGTGCAGGTTGGGCTaGTTCTTCTTGGCATACTGCTGCAGCTCAATCACA +
Preference number: 6 (lower is better)
Translates to: SSWSLLRMCRLG*FFLAYCCSSIT
Trigger: TGTGATTGAGCTGCAGCAGTATGCCAAGAAGAACAAGCCCAACCTGCACATCCTCAGCAAGCTCCAAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000475941.1
ENST00000485802.1
ENST00000495826.5
ENST00000498171.5
CDS TCA 72 bp AAAGACCCCCAGTTCTTGACATGTGGGTGCAGCAGCTaGAGGATCTTCTGTGAGGCTAACTGCTTTCCAACT +
Preference number: 6 (lower is better)
Translates to: KDPQFLTCGCSS*RIFCEANCFPT
Trigger: AGTTGGAAAGCAGTTAGCCTCACAGAAGATCCTTCAGCTGCTGCACCCACATGTCAAGAACTGGGGGTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000485802.1
ENST00000495351.1
ENST00000495826.5
ENST00000498171.5
CDS TCA 72 bp TGCGGTGCCATGTGTGTGGATGTGCACGTTTTGGTCTaGGAACTTACAAGCCTAAAGTCACGACTGATGCCT +
Preference number: 6 (lower is better)
Translates to: CGAMCVDVHVLV*ELTSLKSRLMP
Trigger: AGGCATCAGTCGTGACTTTAGGCTTGTAAGTTCTCAGACCAAAACGTGCACATCCACACACATGGCACCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498171.5
CDS CCA 72 bp ATGGTTTCTTTTAAGGCACTCGTGGAGGATCTGATATaGAGACAACAGCCCAGCCTTGCTGGTCAGCTCGTA +
Preference number: 6 (lower is better)
Translates to: MVSFKALVEDLI*RQQPSLAGQLV
Trigger: TACGAGCTGACCAGCAAGGCTGGGCTGTTGTCTCCATATCAGATCCTCCACGAGTGCCTTAAAAGAAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000491892.1
ENST00000495351.1
ENST00000495826.5
ENST00000498171.5
CDS CAA 72 bp TTCTTCTTGGCATACTGCTGCAGCTCAATCACACTCTaGTCCGATGTCTCCTGCTTGACCATCTTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: FFLAYCCSSITL*SDVSCLTILLL
Trigger: GAGCAGCAAGATGGTCAAGCAGGAGACATCGGACAAGAGTGTGATTGAGCTGCAGCAGTATGCCAAGAAGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000485802.1
ENST00000495826.5
ENST00000498171.5
CDS TCA 72 bp TCTCACATTCAAAGAAATTATAGACAGGGCGGACCTTaGGGACACGCTGCATGTACTCGTGCAGGATGCAGA +
Preference number: 6 (lower is better)
Translates to: SHIQRNYRQGGP*GHAACTRAGCR
Trigger: TCTGCATCCTGCACGAGTACATGCAGCGTGTCCTCAAGGTCCGCCCTGTCTATAATTTCTTTGAATGTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000495826.5
ENST00000498171.5
CDS GCA 72 bp GCCACAACAGCAGAAACAAGACAGATGGTACACATATaGTCTTCTGTTAGAGATGGACCGGCACTGGTACCA +
Preference number: 6 (lower is better)
Translates to: ATTAETRQMVHI*SSVRDGPALVP
Trigger: TGGTACCAGTGCCGGTCCATCTCTAACAGAAGAGCATATGTGTACCATCTGTCTTGTTTCTGCTGTTGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS CCA 72 bp GCAGGATGTTGGCCACAACAGCAGAAACAAGACAGATaGTACACATATGCTCTTCTGTTAGAGATGGACCGG +
Preference number: 6 (lower is better)
Translates to: AGCWPQQQKQDR*YTYALLLEMDR
Trigger: CCGGTCCATCTCTAACAGAAGAGCATATGTGTACCATCTGTCTTGTTTCTGCTGTTGTGGCCAACATCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS CAA 90 bp TCCAATGACCAGGAGGGCAAGAACCCAGAGAGTTTCTGTAATCATTaGAGGAAAATGATTACACTCACCTCCCCATGTTACCCTCCACCC +
Preference number: 6 (lower is better)
Translates to: SNDQEGKNPESFCNH*RKMITLTSPCYPPP
Trigger: GGGTGGAGGGTAACATGGGGAGGTGAGTGTAATCATTTTCCTCAAATGATTACAGAAACTCTCTGGGTTCTTGCCCTCCTGGTCATTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475941.1
CDS CAA 90 bp GCTTTAGCCGTGAACCCGCCTGCTCCTTCTTCATCTAGCTCCAAATaGTCAGTAAAATCTTCTAACTCATCGAGCACTGCATACTCCACT +
Preference number: 6 (lower is better)
Translates to: ALAVNPPAPSSSSSK*SVKSSNSSSTAYST
Trigger: AGTGGAGTATGCAGTGCTCGATGAGTTAGAAGATTTTACTGACAATTTGGAGCTAGATGAAGAAGGAGCAGGCGGGTTCACGGCTAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000495826.5
CDS CCA 72 bp ATTATTGGAAATCACAATGCACTCAGCTTAAGTGACTaGCGACTAAGCGAGTCTGTCTTCATGCCGGAGTGG +
Preference number: 6 (lower is better)
Translates to: IIGNHNALSLSD*RLSESVFMPEW
Trigger: CCACTCCGGCATGAAGACAGACTCGCTTAGTCGCCAGTCACTTAAGCTGAGTGCATTGTGATTTCCAATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000457069.1
CDS CCA 72 bp GTGTGCTTGCCACACGCCATGACGTATTCACTCTTCTaGTTTTTCCCAGGAACCACTTCAAACTTGATAGAC +
Preference number: 6 (lower is better)
Translates to: VCLPHAMTYSLF*FFPGTTSNLID
Trigger: GTCTATCAAGTTTGAAGTGGTTCCTGGGAAAAACCAGAAGAGTGAATACGTCATGGCGTGTGGCAAGCACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000485802.1
ENST00000491892.1
ENST00000495351.1
ENST00000495826.5
ENST00000498171.5
CDS CAA 72 bp ATGTACTCGTGCAGGATGCAGACCTCGGATTTCCCGTaGGGGTTAATAACAAACTCTTTCTTTGTGGGTGCA +
Preference number: 6 (lower is better)
Translates to: MYSCRMQTSDFP*GLITNSFFVGA
Trigger: TGCACCCACAAAGAAAGAGTTTGTTATTAACCCCAACGGGAAATCCGAGGTCTGCATCCTGCACGAGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000495826.5
ENST00000498171.5
CDS CAA 90 bp AACTATCACACATGTCGAAGCTCAAAGAAAAGCCTGTATCTGATTTaGGAAGGAGGATCCAAGCATTTCCAAGGTGTCAGCTCAGGCACG +
Preference number: 6 (lower is better)
Translates to: NYHTCRSSKKSLYLI*EGGSKHFQGVSSGT
Trigger: CGTGCCTGAGCTGACACCTTGGAAATGCTTGGATCCTCCTTCCAAAATCAGATACAGGCTTTTCTTTGAGCTTCGACATGTGTGATAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485802.1
CDS GCA 72 bp CGTTGTCCTTCATTTTCTTATAATGCAGACAAGGGATaGTACTCAGAGGAGGGTCGTGTTTCCGTATGCTTC +
Preference number: 6 (lower is better)
Translates to: RCPSFSYNADKG*YSEEGRVSVCF
Trigger: GAAGCATACGGAAACACGACCCTCCTCTGAGTAGCATCCCTTGTCTGCATTATAAGAAAATGAAGGACAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000495826.5
CDS CAA 72 bp GTGAACCCGCCTGCTCCTTCTTCATCTAGCTCCAAATaGTCAGTAAAATCTTCTAACTCATCGAGCACTGCA +
Preference number: 6 (lower is better)
Translates to: VNPPAPSSSSSK*SVKSSNSSSTA
Trigger: TGCAGTGCTCGATGAGTTAGAAGATTTTACTGACAATTTGGAGCTAGATGAAGAAGGAGCAGGCGGGTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000495826.5
CDS CAA 72 bp ACTCAGAGGAGGGTCGTGTTTCTGTGGATAGTGAAATaGCAATATGGATTACAAGGACAACCCGAGAGTCTG +
Preference number: 6 (lower is better)
Translates to: TQRRVVFLWIVK*QYGLQGQPESL
Trigger: CAGACTCTCGGGTTGTCCTTGTAATCCATATTGCAATTTCACTATCCACAGAAACACGACCCTCCTCTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498171.5
CDS CAA 90 bp ATGACGTATTCACTCTTCTGGTTTTTCCCAGGAACCACTTCAAACTaGATAGACGTGTCACCCATCCCATGGTTTCTTTTAAGGCACTCG +
Preference number: 6 (lower is better)
Translates to: MTYSLFWFFPGTTSN*IDVSPIPWFLLRHS
Trigger: CGAGTGCCTTAAAAGAAACCATGGGATGGGTGACACGTCTATCAAGTTTGAAGTGGTTCCTGGGAAAAACCAGAAGAGTGAATACGTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000491892.1
ENST00000495351.1
ENST00000495826.5
ENST00000498171.5
CDS GCA 72 bp CGTTGTCCTTCATTTTCTTATAATGCAGACAAGGGATaGTACTCAGAGGAGGGTCGTGTTTCTGTGGATAGT +
Preference number: 6 (lower is better)
Translates to: RCPSFSYNADKG*YSEEGRVSVDS
Trigger: ACTATCCACAGAAACACGACCCTCCTCTGAGTAGCATCCCTTGTCTGCATTATAAGAAAATGAAGGACAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498171.5
CDS CCA 72 bp ACAAGGGATGCTACTCAGAGGAGGGTCGTGTTTCTGTaGATAGTGAAATTGCAATATGGATTACAAGGACAA +
Preference number: 6 (lower is better)
Translates to: TRDATQRRVVFL*IVKLQYGLQGQ
Trigger: TTGTCCTTGTAATCCATATTGCAATTTCACTATCCACAGAAACACGACCCTCCTCTGAGTAGCATCCCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498171.5
CDS CAA 72 bp CTGATGTGGTTAAAATACTCGAGTTCTTCACTGTCTTaGGGCTTCTCTTCAGAGGTCTGTTTAACAAAGTCA +
Preference number: 6 (lower is better)
Translates to: LMWLKYSSSSLS*GFSSEVCLTKS
Trigger: TGACTTTGTTAAACAGACCTCTGAAGAGAAGCCCAAAGACAGTGAAGAACTCGAGTATTTTAACCACATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351989.8
ENST00000383024.6
ENST00000407755.1
ENST00000491892.1
ENST00000495826.5
ENST00000498171.5