Pregenerated sensors for DGCR6 (Homo sapiens)
Ensembl gene IDs: ENSG00000183628Ensembl transcript IDs: ENST00000483718.5, ENST00000608842.1
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCCGAGGAAGGGCTGCACCTCCAAGAAGGGAGCTAGAGGAGAGGTaGGAGAGGAGAGGGGAGGGAAAGCAGGTGGGAGGCCTTGTTGGC | + |
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Preference number: 1 (lower is better) Translates to: ARGRAAPPRRELEER*ERRGEGKQVGGLVG Trigger: GCCAACAAGGCCTCCCACCTGCTTTCCCTCCCCTCTCCTCTCTCACCTCTCCTCTAGCTCCCTTCTTGGAGGTGCAGCCCTTCCTCGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| 3UTR GCA 90 bp | TTCTTGGTTTTCACGACTAGGGAGGGTACCCCTGCCATCCTGCAATaGGCAAGACAGCATCTCACCATAAAGACTTACCCAGCCACAAAT | + |
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Preference number: 1 (lower is better) Translates to: FLVFTTREGTPAILQ*ARQHLTIKTYPATN Trigger: ATTTGTGGCTGGGTAAGTCTTTATGGTGAGATGCTGTCTTGCGCATTGCAGGATGGCAGGGGTACCCTCCCTAGTCGTGAAAACCAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| 3UTR TCA 90 bp | GTATGTATTTTGGGATGTCAAGAACTAGAGCAAAATGTTAACTACTaGACTTTCGGTGGAGAGCACAAGCGTATGCACTACACTGTCTTT | + |
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Preference number: 1 (lower is better) Translates to: VCILGCQELEQNVNY*TFGGEHKRMHYTVF Trigger: AAAGACAGTGTAGTGCATACGCTTGTGCTCTCCACCGAAAGTTCAGTAGTTAACATTTTGCTCTAGTTCTTGACATCCCAAAATACATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| 3UTR-3UTR GCA 90 bp | ACCCAGGTTGTCTGGAGGCATTCTTGGTTTTCACGACTAGGGAGGGTACCCCTGCCACCAGAGTCAGCCTaGCGGCCAACCAAGCACGGA | + |
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Preference number: 2 (lower is better) Translates to: TQVVWRHSWFSRLGRVPLPPESA*RPTKHG Trigger: TCCGTGCTTGGTTGGCCGGCAGGCTGACTCTGGTGG...CAGGGGTACCCTCCCTAGTCGTGAAAACCAAGAATGCCTCCAGACAACCTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| 3UTR-3UTR GCA 90 bp | TATTTGACATTTGCAACACATCTCGATTCAGAGCAGCCGCCTTCCGAGGACTCGGGTGCCTCCCAGCCCTaGCCAGAGTATGGGCACTCA | + |
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Preference number: 2 (lower is better) Translates to: YLTFATHLDSEQPPSEDSGASQP*PEYGHS Trigger: TGAGTGCCCATACTCTGGGCAGGGCTGGGAGGCACC...CGAGTCCTCGGAAGGCGGCTGCTCTGAATCGAGATGTGTTGCAAATGTCAAATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| 3UTR-3UTR GCA 90 bp | TATTTGACATTTGCAACACATCTCGATTCAGAGCAGCCGCCTTCCGAGGACTCGCCTCTTCCATCGCCCTaGCTAGCACCCGCCAGCACA | + |
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Preference number: 2 (lower is better) Translates to: YLTFATHLDSEQPPSEDSPLPSP*LAPAST Trigger: TGTGCTGGCGGGTGCTAGGCAGGGCGATGGAAGAGG...CGAGTCCTCGGAAGGCGGCTGCTCTGAATCGAGATGTGTTGCAAATGTCAAATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| 3UTR-3UTR CCA 90 bp | TATTTGACATTTGCAACACATCTCGATTCAGAGCAGCCGCCTTCCGAGGACTCGCTGGTGGCAGCTGTGTaGGACACAGCAGCTGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: YLTFATHLDSEQPPSEDSLVAAV*DTAAVG Trigger: CCCCACAGCTGCTGTGTCCCACACAGCTGCCACCAG...CGAGTCCTCGGAAGGCGGCTGCTCTGAATCGAGATGTGTTGCAAATGTCAAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| 3UTR-3UTR CCA 90 bp | TATTTGACATTTGCAACACATCTCGATTCAGAGCAGCCGCCTTCCGAGGACTCGGGACAGGCTCAGAGCTaGGACAGGAGCCCTGTATCC | + |
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Preference number: 2 (lower is better) Translates to: YLTFATHLDSEQPPSEDSGQAQS*DRSPVS Trigger: GGATACAGGGCTCCTGTCCCAGCTCTGAGCCTGTCC...CGAGTCCTCGGAAGGCGGCTGCTCTGAATCGAGATGTGTTGCAAATGTCAAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| 3UTR-3UTR CCA 90 bp | TATTTGACATTTGCAACACATCTCGATTCAGAGCAGCCGCCTTCCGAGGACTCGATGGGGCACCTGGGATaGCAGGACAGGCTCAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: YLTFATHLDSEQPPSEDSMGHLG*QDRLRA Trigger: AGCTCTGAGCCTGTCCTGCCATCCCAGGTGCCCCAT...CGAGTCCTCGGAAGGCGGCTGCTCTGAATCGAGATGTGTTGCAAATGTCAAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| 3UTR-3UTR CCA 90 bp | TATTTGACATTTGCAACACATCTCGATTCAGAGCAGCCGCCTTCCGAGGACTCGGGGAGGGAAAGCAGGTaGGAGGCCTTGTTGGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: YLTFATHLDSEQPPSEDSGRESR*EALLAK Trigger: CTTGGCCAACAAGGCCTCCCACCTGCTTTCCCTCCC...CGAGTCCTCGGAAGGCGGCTGCTCTGAATCGAGATGTGTTGCAAATGTCAAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| 3UTR-3UTR GCA 90 bp | TATTTGACATTTGCAACACATCTCGATTCAGAGCAGCCGCCTTCCGAGGACTCGGCCGAACCTGATACCTaGCTGGGACAGCCACTGGAA | + |
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Preference number: 2 (lower is better) Translates to: YLTFATHLDSEQPPSEDSAEPDT*LGQPLE Trigger: TTCCAGTGGCTGTCCCAGGCAGGTATCAGGTTCGGC...CGAGTCCTCGGAAGGCGGCTGCTCTGAATCGAGATGTGTTGCAAATGTCAAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| 3UTR-3UTR CCA 90 bp | TATTTGACATTTGCAACACATCTCGATTCAGAGCAGCCGCCTTCCGAGGACTCGCAAGTACGTGCCCTATaGCCCCGTGATGGAGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: YLTFATHLDSEQPPSEDSQVRAL*PRDGGA Trigger: AGCACCTCCATCACGGGGCCATAGGGCACGTACTTG...CGAGTCCTCGGAAGGCGGCTGCTCTGAATCGAGATGTGTTGCAAATGTCAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGTGTACAGTAAACCCAGAGAGTGGAGAAGCAGGTTAAATGCACGAGGAAGCTCAGCATGGCTGGGTTaGAAATCCTGGTCTCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: PVYSKPREWRSRLNARGSSAWLG*KSWSPG Trigger: TCCTGGAGACCAGGATTTTCAACCCAGCCATGCTGA...GCTTCCTCGTGCATTTAACCTGCTTCTCCACTCTCTGGGTTTACTGTACACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| 3UTR-3UTR CCA 90 bp | TATTTGACATTTGCAACACATCTCGATTCAGAGCAGCCGCCTTCCGAGGACTCGGCCTGGGACAGCCACTaGAAACTTTTGGGAACTCTC | + |
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Preference number: 2 (lower is better) Translates to: YLTFATHLDSEQPPSEDSAWDSH*KLLGTL Trigger: GAGAGTTCCCAAAAGTTTCCAGTGGCTGTCCCAGGC...CGAGTCCTCGGAAGGCGGCTGCTCTGAATCGAGATGTGTTGCAAATGTCAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| 3UTR-3UTR TCA 90 bp | ACCCAGGTTGTCTGGAGGCATTCTTGGTTTTCACGACTAGGGAGGGTACCCCTGCAAAATGTTAACTACTaGACTTTCGGTGGAGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: TQVVWRHSWFSRLGRVPLQNVNY*TFGGEH Trigger: GTGCTCTCCACCGAAAGTTCAGTAGTTAACATTTTG...CAGGGGTACCCTCCCTAGTCGTGAAAACCAAGAATGCCTCCAGACAACCTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| 3UTR-3UTR CCA 90 bp | TTCTTGGTTTTCACGACTAGGGAGGGTACCCCTGCCATCCTGCAATGCGCAAGAAAATGTCAGCATGGCTaGGTTGAAAATCCTGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: FLVFTTREGTPAILQCARKCQHG*VENPGL Trigger: GAGACCAGGATTTTCAACCCAGCCATGCTGACATTT...TCTTGCGCATTGCAGGATGGCAGGGGTACCCTCCCTAGTCGTGAAAACCAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| 3UTR-3UTR CCA 90 bp | TATTTGACATTTGCAACACATCTCGATTCAGAGCAGCCGCCTTCCGAGGACTCGGCCACTGGAAACTTTTaGGAACTCTCCTCGAATGTG | + |
|
Preference number: 2 (lower is better) Translates to: YLTFATHLDSEQPPSEDSATGNF*ELSSNV Trigger: CACATTCGAGGAGAGTTCCCAAAAGTTTCCAGTGGC...CGAGTCCTCGGAAGGCGGCTGCTCTGAATCGAGATGTGTTGCAAATGTCAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| 3UTR CAA 90 bp | TCAAGAGCTGCCAAAAAGGAAACTGCCAAAATCCAACATCCATTCTaGATAGAAACACACCAATCCTGGAGCAGATGGACACTGCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: SRAAKKETAKIQHPF*IETHQSWSRWTLPA Trigger: GGCAGGCAGTGTCCATCTGCTCCAGGATTGGTGTGTTTCTATCAAGAATGGATGTTGGATTTTGGCAGTTTCCTTTTTGGCAGCTCTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGTACAGTAAACCCAGAGAGTGGAGAAGCAGGTTAAATGCACGAGGAAGCTGCCACAATAAATGTTaGGGACTGTTCCAGAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: PVYSKPREWRSRLNARGSCHNKC*GLFQKQ Trigger: TTGCTTCTGGAACAGTCCCCAACATTTATTGTGGCA...GCTTCCTCGTGCATTTAACCTGCTTCTCCACTCTCTGGGTTTACTGTACACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| 3UTR-3UTR CCA 90 bp | ATAGAAAATGATTCACCACGTGATCATCTCAAGAGCTGCCAAAAAGGAAACTGCACCACCCAGGTTGTCTaGAGGCATTCTTGGTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: IENDSPRDHLKSCQKGNCTTQVV*RHSWFS Trigger: TGAAAACCAAGAATGCCTCCAGACAACCTGGGTGGT...GCAGTTTCCTTTTTGGCAGCTCTTGAGATGATCACGTGGTGAATCATTTTCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| 3UTR-3UTR CCA 90 bp | GTAATAGAAAATGATTCACCACGTGATCATCTCAAGAGCTGCCAAAAAGGAAACAGTAAACCCAGAGAGTaGAGAAGCAGGTTAAATGCA | + |
|
Preference number: 2 (lower is better) Translates to: VIENDSPRDHLKSCQKGNSKPRE*RSRLNA Trigger: TGCATTTAACCTGCTTCTCCACTCTCTGGGTTTACT...GTTTCCTTTTTGGCAGCTCTTGAGATGATCACGTGGTGAATCATTTTCTATTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| 3UTR TCA 72 bp | GCTACCCCGTGTACAAGTACGTGCCCTATGGCCCCGTaGTGGAGGTGCTGCCCTACTTGTCCCGCCGTGCCC | + |
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Preference number: 3 (lower is better) Translates to: ATPCTSTCPMAP*WRCCPTCPAVP Trigger: GGGCACGGCGGGACAAGTAGGGCAGCACCTCCATCACGGGGCCATAGGGCACGTACTTGTACACGGGGTAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| 3UTR TCA 72 bp | AGGGCTGCACCTCCAAGAAGGGAGCTAGAGGAGAGGTaGGAGAGGAGAGGGGAGGGAAAGCAGGTGGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: RAAPPRRELEER*ERRGEGKQVGG Trigger: GCCTCCCACCTGCTTTCCCTCCCCTCTCCTCTCTCACCTCTCCTCTAGCTCCCTTCTTGGAGGTGCAGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| 3UTR-3UTR CAA 90 bp | GAAACACACCAATCCTGGAGCAGATGGACACTGCCTGCCTTCTGGGGAAGGGGGACCCCACCACCCAGGTaGTCTGGAGGCATTCTTGGT | + |
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Preference number: 3 (lower is better) Translates to: ETHQSWSRWTLPAFWGRGTPPPR*SGGILG Trigger: ACCAAGAATGCCTCCAGACAACCTGGGTGGTGGGGT...CCCCCTTCCCCAGAAGGCAGGCAGTGTCCATCTGCTCCAGGATTGGTGTGTTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| 3UTR-3UTR CAA 90 bp | TATTTGACATTTGCAACACATCTCGATTCAGAGCAGCCGCCTTCCGAGGACTCGGAGGTGCTGCCCTACTaGTCCCGCCGTGCCCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: YLTFATHLDSEQPPSEDSEVLPY*SRRALE Trigger: CTCCAGGGCACGGCGGGACAAGTAGGGCAGCACCTC...CGAGTCCTCGGAAGGCGGCTGCTCTGAATCGAGATGTGTTGCAAATGTCAAATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| 3UTR CCA 72 bp | CCATTCTTGATAGAAACACACCAATCCTGGAGCAGATaGACACTGCCTGCCTTCTGGGGAAGGGGGCCTTGC | + |
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Preference number: 3 (lower is better) Translates to: PFLIETHQSWSR*TLPAFWGRGPC Trigger: GCAAGGCCCCCTTCCCCAGAAGGCAGGCAGTGTCCATCTGCTCCAGGATTGGTGTGTTTCTATCAAGAATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| 3UTR GCA 72 bp | TTCACGACTAGGGAGGGTACCCCTGCCATCCTGCAATaGGCAAGACAGCATCTCACCATAAAGACTTACCCA | + |
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Preference number: 3 (lower is better) Translates to: FTTREGTPAILQ*ARQHLTIKTYP Trigger: TGGGTAAGTCTTTATGGTGAGATGCTGTCTTGCGCATTGCAGGATGGCAGGGGTACCCTCCCTAGTCGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| 3UTR CCA 72 bp | ATCCAACATCCATTCTTGATAGAAACACACCAATCCTaGAGCAGATGGACACTGCCTGCCTTCTGGGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: IQHPFLIETHQS*SRWTLPAFWGR Trigger: CCTTCCCCAGAAGGCAGGCAGTGTCCATCTGCTCCAGGATTGGTGTGTTTCTATCAAGAATGGATGTTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| 3UTR-3UTR CAA 90 bp | TATTTGACATTTGCAACACATCTCGATTCAGAGCAGCCGCCTTCCGAGGACTCGAGCCACTGGAAACTTTaGGGAACTCTCCTCGAATGT | + |
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Preference number: 3 (lower is better) Translates to: YLTFATHLDSEQPPSEDSSHWKL*GTLLEC Trigger: ACATTCGAGGAGAGTTCCCAAAAGTTTCCAGTGGCT...CGAGTCCTCGGAAGGCGGCTGCTCTGAATCGAGATGTGTTGCAAATGTCAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| 3UTR-3UTR CAA 90 bp | GTAATAGAAAATGATTCACCACGTGATCATCTCAAGAGCTGCCAAAAAGGAAACGTCAGCATGGCTGGGTaGAAAATCCTGGTCTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: VIENDSPRDHLKSCQKGNVSMAG*KILVSR Trigger: CCTGGAGACCAGGATTTTCAACCCAGCCATGCTGAC...GTTTCCTTTTTGGCAGCTCTTGAGATGATCACGTGGTGAATCATTTTCTATTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| 3UTR TCA 72 bp | TTGGGATGTCAAGAACTAGAGCAAAATGTTAACTACTaGACTTTCGGTGGAGAGCACAAGCGTATGCACTAC | + |
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Preference number: 3 (lower is better) Translates to: LGCQELEQNVNY*TFGGEHKRMHY Trigger: GTAGTGCATACGCTTGTGCTCTCCACCGAAAGTTCAGTAGTTAACATTTTGCTCTAGTTCTTGACATCCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| 3UTR TCA 72 bp | AGAAGCAAAGAGACCAAAGTAACCAATTGTAGTACATaGACTTGGACTGGATCCTTACTTATAAAGCAACAA | + |
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Preference number: 3 (lower is better) Translates to: RSKETKVTNCST*TWTGSLLIKQQ Trigger: TTGTTGCTTTATAAGTAAGGATCCAGTCCAAGTTCATGTACTACAATTGGTTACTTTGGTCTCTTTGCTTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| CDS-3UTR CCA 90 bp | CGACTAGGGAGGGTACCCCTGCCATCCTGCAATGCGCAAGACAGCATCTCACCACCAGGTCGCTCAGCGTaGTGTAGGACAAGCGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: RLGRVPLPSCNAQDSISPPGRSA*CRTSAA Trigger: AGCAGCGCTTGTCCTACACCACGCTGAGCGACCTGG...TGGTGAGATGCTGTCTTGCGCATTGCAGGATGGCAGGGGTACCCTCCCTAGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| CDS-3UTR CCA 90 bp | TATTTGACATTTGCAACACATCTCGATTCAGAGCAGCCGCCTTCCGAGGACTCGGGACTCGGGGGCTGGTaGCAGCTGTGTGGGACACAG | + |
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Preference number: 4 (lower is better) Translates to: YLTFATHLDSEQPPSEDSGLGGW*QLCGTQ Trigger: CTGTGTCCCACACAGCTGCCACCAGCCCCCGAGTCC...CGAGTCCTCGGAAGGCGGCTGCTCTGAATCGAGATGTGTTGCAAATGTCAAATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| CDS-3UTR CCA 90 bp | TATTTGACATTTGCAACACATCTCGATTCAGAGCAGCCGCCTTCCGAGGACTCGCGAGGACTCGGGGGCTaGTGGCAGCTGTGTGGGACA | + |
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Preference number: 4 (lower is better) Translates to: YLTFATHLDSEQPPSEDSRGLGG*WQLCGT Trigger: TGTCCCACACAGCTGCCACCAGCCCCCGAGTCCTCG...CGAGTCCTCGGAAGGCGGCTGCTCTGAATCGAGATGTGTTGCAAATGTCAAATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| CDS-3UTR GCA 90 bp | GCATTCTTGGTTTTCACGACTAGGGAGGGTACCCCTGCCATCCTGCAATGCGCACCTGCCATCCTGCAATaGGCAAGACAGCATCTCACC | + |
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Preference number: 4 (lower is better) Translates to: AFLVFTTREGTPAILQCAPAILQ*ARQHLT Trigger: GGTGAGATGCTGTCTTGCGCATTGCAGGATGGCAGG...TGCGCATTGCAGGATGGCAGGGGTACCCTCCCTAGTCGTGAAAACCAAGAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| CDS-3UTR TCA 90 bp | TATTTGACATTTGCAACACATCTCGATTCAGAGCAGCCGCCTTCCGAGGACTCGCAAGCGCTGCTGGAATaGGCAGGCTCTGTAACGCCG | + |
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Preference number: 4 (lower is better) Translates to: YLTFATHLDSEQPPSEDSQALLE*AGSVTP Trigger: CGGCGTTACAGAGCCTGCTCATTCCAGCAGCGCTTG...CGAGTCCTCGGAAGGCGGCTGCTCTGAATCGAGATGTGTTGCAAATGTCAAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| CDS-3UTR GCA 90 bp | GCTAGGAGGAATTTTTGCCACATTAAACCTGCCTCTAATCAGGCTCCTACCAGGCCACCAGAGTCAGCCTaGCGGCCAACCAAGCACGGA | + |
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Preference number: 4 (lower is better) Translates to: ARRNFCHIKPASNQAPTRPPESA*RPTKHG Trigger: TCCGTGCTTGGTTGGCCGGCAGGCTGACTCTGGTGG...CCTGGTAGGAGCCTGATTAGAGGCAGGTTTAATGTGGCAAAAATTCCTCCTAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| CDS-3UTR CCA 90 bp | TATTTGACATTTGCAACACATCTCGATTCAGAGCAGCCGCCTTCCGAGGACTCGCCAGGTCGCTCAGCGTaGTGTAGGACAAGCGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: YLTFATHLDSEQPPSEDSPGRSA*CRTSAA Trigger: AGCAGCGCTTGTCCTACACCACGCTGAGCGACCTGG...CGAGTCCTCGGAAGGCGGCTGCTCTGAATCGAGATGTGTTGCAAATGTCAAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| CDS-3UTR GCA 90 bp | TATTTGACATTTGCAACACATCTCGATTCAGAGCAGCCGCCTTCCGAGGACTCGTGCCTGAGCACTCGATaGTCGTTCTGTAGGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: YLTFATHLDSEQPPSEDSCLSTR*SFCRRR Trigger: CCTGCGCCTACAGAACGAGCATCGAGTGCTCAGGCA...CGAGTCCTCGGAAGGCGGCTGCTCTGAATCGAGATGTGTTGCAAATGTCAAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| CDS-3UTR CCA 90 bp | GCTAGGAGGAATTTTTGCCACATTAAACCTGCCTCTAATCAGGCTCCTACCAGGGCTGCTGGAATGAGCTaGGCAACTCCTTCACCAGGC | + |
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Preference number: 4 (lower is better) Translates to: ARRNFCHIKPASNQAPTRAAGMS*ATPSPG Trigger: GCCTGGTGAAGGAGTTGCCCAGCTCATTCCAGCAGC...CCTGGTAGGAGCCTGATTAGAGGCAGGTTTAATGTGGCAAAAATTCCTCCTAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| CDS-3UTR CCA 90 bp | GCATTCTTGGTTTTCACGACTAGGGAGGGTACCCCTGCCATCCTGCAATGCGCAACCACCCAGGTTGTCTaGAGGCATTCTTGGTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: AFLVFTTREGTPAILQCATTQVV*RHSWFS Trigger: TGAAAACCAAGAATGCCTCCAGACAACCTGGGTGGT...TGCGCATTGCAGGATGGCAGGGGTACCCTCCCTAGTCGTGAAAACCAAGAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| CDS-3UTR CCA 90 bp | TATTTGACATTTGCAACACATCTCGATTCAGAGCAGCCGCCTTCCGAGGACTCGCAGCATCAGCTCCTGTaGGTTGGTGGTCACGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: YLTFATHLDSEQPPSEDSQHQLL*VGGHVE Trigger: TTCTACGTGACCACCAACCCACAGGAGCTGATGCTG...CGAGTCCTCGGAAGGCGGCTGCTCTGAATCGAGATGTGTTGCAAATGTCAAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| CDS-3UTR CCA 90 bp | GCTAGGAGGAATTTTTGCCACATTAAACCTGCCTCTAATCAGGCTCCTACCAGGCAATCCTGGAGCAGATaGACACTGCCTGCCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: ARRNFCHIKPASNQAPTRQSWSR*TLPAFW Trigger: CCAGAAGGCAGGCAGTGTCCATCTGCTCCAGGATTG...CCTGGTAGGAGCCTGATTAGAGGCAGGTTTAATGTGGCAAAAATTCCTCCTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| CDS-3UTR CCA 90 bp | GTAATAGAAAATGATTCACCACGTGATCATCTCAAGAGCTGCCAAAAAGGAAACACACTGCCTGCCTTCTaGGGAAGGGGGCCTTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: VIENDSPRDHLKSCQKGNTLPAF*GRGPCP Trigger: GGGGCAAGGCCCCCTTCCCCAGAAGGCAGGCAGTGT...GTTTCCTTTTTGGCAGCTCTTGAGATGATCACGTGGTGAATCATTTTCTATTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| CDS-3UTR GCA 90 bp | CGACTAGGGAGGGTACCCCTGCCATCCTGCAATGCGCAAGACAGCATCTCACCATATAAAGCAACAATTTaGCACAAGTTAGGTACCATG | + |
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Preference number: 4 (lower is better) Translates to: RLGRVPLPSCNAQDSISPYKATI*HKLGTM Trigger: CATGGTACCTAACTTGTGGCAAATTGTTGCTTTATA...TGGTGAGATGCTGTCTTGCGCATTGCAGGATGGCAGGGGTACCCTCCCTAGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| CDS-3UTR GCA 90 bp | ATAGAAAATGATTCACCACGTGATCATCTCAAGAGCTGCCAAAAAGGAAACTGCGGAGCAGATGGACACTaGCTGCCTTCTGGGGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: IENDSPRDHLKSCQKGNCGADGH*LPSGEG Trigger: CCCTTCCCCAGAAGGCAGGCAGTGTCCATCTGCTCC...GCAGTTTCCTTTTTGGCAGCTCTTGAGATGATCACGTGGTGAATCATTTTCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| CDS-3UTR CCA 90 bp | ACAGCATCTCACCATAAAGACTTACCCAGCCACAAATGTCAGCATGGCTGGGTTGTCTGGAGGCATTCTTaGTTTTCACGACTAGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TASHHKDLPSHKCQHGWVVWRHS*FSRLGR Trigger: CCTCCCTAGTCGTGAAAACCAAGAATGCCTCCAGAC...AACCCAGCCATGCTGACATTTGTGGCTGGGTAAGTCTTTATGGTGAGATGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| CDS-3UTR GCA 90 bp | TATTTGACATTTGCAACACATCTCGATTCAGAGCAGCCGCCTTCCGAGGACTCGAGCAACGCGGCATCGTaGATTATTTTTCTACAAAGT | + |
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Preference number: 4 (lower is better) Translates to: YLTFATHLDSEQPPSEDSSNAAS*IIFLQS Trigger: ACTTTGTAGAAAAATAATGCACGATGCCGCGTTGCT...CGAGTCCTCGGAAGGCGGCTGCTCTGAATCGAGATGTGTTGCAAATGTCAAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| CDS-3UTR TCA 90 bp | GTAATAGAAAATGATTCACCACGTGATCATCTCAAGAGCTGCCAAAAAGGAAACTCAGCATGGCTGGGTTaGAAATCCTGGTCTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: VIENDSPRDHLKSCQKGNSAWLG*KSWSPG Trigger: TCCTGGAGACCAGGATTTTCAACCCAGCCATGCTGA...GTTTCCTTTTTGGCAGCTCTTGAGATGATCACGTGGTGAATCATTTTCTATTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| 3UTR CAA 72 bp | GCCAAAAAGGAAACTGCCAAAATCCAACATCCATTCTaGATAGAAACACACCAATCCTGGAGCAGATGGACA | + |
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Preference number: 4 (lower is better) Translates to: AKKETAKIQHPF*IETHQSWSRWT Trigger: TGTCCATCTGCTCCAGGATTGGTGTGTTTCTATCAAGAATGGATGTTGGATTTTGGCAGTTTCCTTTTTGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| CDS-3UTR GCA 90 bp | ATAGAAAATGATTCACCACGTGATCATCTCAAGAGCTGCCAAAAAGGAAACTGCGCTAGGAGGAATTTTTaGCACATTAAACCTGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: IENDSPRDHLKSCQKGNCARRNF*HIKPAS Trigger: AGAGGCAGGTTTAATGTGGCAAAAATTCCTCCTAGC...GCAGTTTCCTTTTTGGCAGCTCTTGAGATGATCACGTGGTGAATCATTTTCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| CDS-3UTR CCA 90 bp | AGCATTTCCTCTGATAGATCCAGAGCAGGGCATTCTAATTATAGAATTAGACTCAAATGTCAGCATGGCTaGGTTGAAAATCCTGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: SISSDRSRAGHSNYRIRLKCQHG*VENPGL Trigger: GAGACCAGGATTTTCAACCCAGCCATGCTGACATTT...GAGTCTAATTCTATAATTAGAATGCCCTGCTCTGGATCTATCAGAGGAAATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| CDS-3UTR TCA 90 bp | AGCATTTCCTCTGATAGATCCAGAGCAGGGCATTCTAATTATAGAATTAGACTCCAAAATGTTAACTACTaGACTTTCGGTGGAGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: SISSDRSRAGHSNYRIRLQNVNY*TFGGEH Trigger: GTGCTCTCCACCGAAAGTTCAGTAGTTAACATTTTG...GAGTCTAATTCTATAATTAGAATGCCCTGCTCTGGATCTATCAGAGGAAATGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| CDS-3UTR CCA 90 bp | AGCACAAGCGTATGCACTACACTGTCTTTTCAGTTTTTCCAAATGTTTGAACTTTGCCACAATAAATGTTaGGGACTGTTCCAGAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: STSVCTTLSFQFFQMFELCHNKC*GLFQKQ Trigger: TTGCTTCTGGAACAGTCCCCAACATTTATTGTGGCA...AAGTTCAAACATTTGGAAAAACTGAAAAGACAGTGTAGTGCATACGCTTGTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| CDS-3UTR CCA 90 bp | CCAGAGCAGGGCATTCTAATTATAGAATTAGACTCTATAAAAAGTCAATGCCACAGTAAACCCAGAGAGTaGAGAAGCAGGTTAAATGCA | + |
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Preference number: 4 (lower is better) Translates to: PEQGILIIELDSIKSQCHSKPRE*RSRLNA Trigger: TGCATTTAACCTGCTTCTCCACTCTCTGGGTTTACT...GTGGCATTGACTTTTTATAGAGTCTAATTCTATAATTAGAATGCCCTGCTCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| CDS-3UTR CAA 90 bp | CCAGTGTACAGTAAACCCAGAGAGTGGAGAAGCAGGTTAAATGCACGAGGAAGCTCTGCGCCCTTGATTTaGTTAATCTTAGGGACCTCT | + |
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Preference number: 5 (lower is better) Translates to: PVYSKPREWRSRLNARGSSAPLI*LILGTS Trigger: AGAGGTCCCTAAGATTAACAAAATCAAGGGCGCAGA...GCTTCCTCGTGCATTTAACCTGCTTCTCCACTCTCTGGGTTTACTGTACACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| CDS-3UTR CAA 90 bp | TTCTTGGTTTTCACGACTAGGGAGGGTACCCCTGCCATCCTGCAATGCGCAAGAATCCAACATCCATTCTaGATAGAAACACACCAATCC | + |
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Preference number: 5 (lower is better) Translates to: FLVFTTREGTPAILQCARIQHPF*IETHQS Trigger: GGATTGGTGTGTTTCTATCAAGAATGGATGTTGGAT...TCTTGCGCATTGCAGGATGGCAGGGGTACCCTCCCTAGTCGTGAAAACCAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| CDS-3UTR CAA 90 bp | TATTTGACATTTGCAACACATCTCGATTCAGAGCAGCCGCCTTCCGAGGACTCGAAATCCCGTGTGTATTaGACATTTGCAACACATCTC | + |
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Preference number: 5 (lower is better) Translates to: YLTFATHLDSEQPPSEDSKSRVY*TFATHL Trigger: GAGATGTGTTGCAAATGTCAAATACACACGGGATTT...CGAGTCCTCGGAAGGCGGCTGCTCTGAATCGAGATGTGTTGCAAATGTCAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| CDS-3UTR CAA 90 bp | AGCATTTCCTCTGATAGATCCAGAGCAGGGCATTCTAATTATAGAATTAGACTCGTCAGCATGGCTGGGTaGAAAATCCTGGTCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SISSDRSRAGHSNYRIRLVSMAG*KILVSR Trigger: CCTGGAGACCAGGATTTTCAACCCAGCCATGCTGAC...GAGTCTAATTCTATAATTAGAATGCCCTGCTCTGGATCTATCAGAGGAAATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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| CDS-3UTR CAA 90 bp | TATTTGACATTTGCAACACATCTCGATTCAGAGCAGCCGCCTTCCGAGGACTCGCAAATTGTATTCCAGTaGCTTTTAGAAAAGCAACGC | + |
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Preference number: 5 (lower is better) Translates to: YLTFATHLDSEQPPSEDSQIVFQ*LLEKQR Trigger: GCGTTGCTTTTCTAAAAGCAACTGGAATACAATTTG...CGAGTCCTCGGAAGGCGGCTGCTCTGAATCGAGATGTGTTGCAAATGTCAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000483718.5 |
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| CDS-3UTR CAA 90 bp | ATAGAAAATGATTCACCACGTGATCATCTCAAGAGCTGCCAAAAAGGAAACTGCTGTCTGGAGGCATTCTaGGTTTTCACGACTAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: IENDSPRDHLKSCQKGNCCLEAF*VFTTRE Trigger: CTCCCTAGTCGTGAAAACCAAGAATGCCTCCAGACA...GCAGTTTCCTTTTTGGCAGCTCTTGAGATGATCACGTGGTGAATCATTTTCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000608842.1 |
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