RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DGAT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000185000

Ensembl transcript IDs: ENST00000332324.5, ENST00000524844.1, ENST00000524965.5, ENST00000525371.1, ENST00000527885.1, ENST00000528718.6, ENST00000531896.5, ENST00000642490.1, ENST00000643032.1, ENST00000644790.2, ENST00000645798.1, ENST00000645871.1, ENST00000646256.1, ENST00000646692.1

Found 484 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCACTCCCCCTACCGGCCATGCCCGCCCTGCTGCAGTGGAGCTGCTaGTCCCCGGCAGGTCCTGGGACAGCTGTCCACACAGCTCTGGCA +
Preference number: 1 (lower is better)
Translates to: ALPLPAMPALLQWSC*SPAGPGTAVHTALA
Trigger: TGCCAGAGCTGTGTGGACAGCTGTCCCAGGACCTGCCGGGGAGCAGCAGCTCCACTGCAGCAGGGCGGGCATGGCCGGTAGGGGGAGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR GCA 90 bp CTTGCACTCCCCCTACCGGCCATGCCCGCCCTGCTGCAGTGGAGCTaGTGCTCCCCGGCAGGTCCTGGGACAGCTGTCCACACAGCTCTG +
Preference number: 1 (lower is better)
Translates to: LALPLPAMPALLQWS*CSPAGPGTAVHTAL
Trigger: CAGAGCTGTGTGGACAGCTGTCCCAGGACCTGCCGGGGAGCAGCAGCTCCACTGCAGCAGGGCGGGCATGGCCGGTAGGGGGAGTGCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR CCA 90 bp CCCACACCAGAAAGGCCCTGTGGACTGCCCATCCCTGGGCCATCCTaGCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCA +
Preference number: 1 (lower is better)
Translates to: PTPERPCGLPIPGPS*LEPTSRKPRADLFP
Trigger: TGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGCCAGGATGGCCCAGGGATGGGCAGTCCACAGGGCCTTTCTGGTGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR CCA 90 bp GCTCACCAGACCCACACCAGAAAGGCCCTGTGGACTGCCCATCCCTaGGCCATCCTGGCTGGAGCCCACTTCCCGCAAACCCAGGGCCGA +
Preference number: 1 (lower is better)
Translates to: AHQTHTRKALWTAHP*AILAGAHFPQTQGR
Trigger: TCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGCCAGGATGGCCCAGGGATGGGCAGTCCACAGGGCCTTTCTGGTGTGGGTCTGGTGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR CCA 90 bp CACCAGAAAGGCCCTGTGGACTGCCCATCCCTGGGCCATCCTGGCTaGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCT +
Preference number: 1 (lower is better)
Translates to: HQKGPVDCPSLGHPG*SPLPANPGPTSSQA
Trigger: AGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGCCAGGATGGCCCAGGGATGGGCAGTCCACAGGGCCTTTCTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR TCA 90 bp GGACCACCAGGAACCCCCTTCCCAAGGTGTTCGCACTCGGACAGGTaGTGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCT +
Preference number: 1 (lower is better)
Translates to: GPPGTPFPRCSHSDR*CGAGTLSFCQSQHP
Trigger: AGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATCACCTGTCCGAGTGCGAACACCTTGGGAAGGGGGTTCCTGGTGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR CCA 90 bp GGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCTaGCTGCCCAGGTTCCAAGTGAAGGAAAGAGGCTGCCAAACCGAG +
Preference number: 1 (lower is better)
Translates to: GAPTSWRAAESHQPT*LPRFQVKERGCQTE
Trigger: CTCGGTTTGGCAGCCTCTTTCCTTCACTTGGAACCTGGGCAGCCAGGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR TCA 90 bp GGCCGACCTCTTCCCAAGCTGAAGCTGAGCACGGTGGGTGCAAGTTaGCCATCCTGCACTGAGGGCCAGAGTGCCGATTCCCGCACACCC +
Preference number: 1 (lower is better)
Translates to: GRPLPKLKLSTVGAS*PSCTEGQSADSRTP
Trigger: GGGTGTGCGGGAATCGGCACTCTGGCCCTCAGTGCAGGATGGTCAACTTGCACCCACCGTGCTCAGCTTCAGCTTGGGAAGAGGTCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR GCA 90 bp CAGCTTGGTGGATTGCAGGGCCTGGGAACAAGGTGTCCTGAAGGCTaGAGGGCTGCGCTGTCTGCACTGCCCAGCCTGGTGCCAGAAGAG +
Preference number: 1 (lower is better)
Translates to: QLGGLQGLGTRCPEG*RAALSALPSLVPEE
Trigger: CTCTTCTGGCACCAGGCTGGGCAGTGCAGACAGCGCAGCCCTGCAGCCTTCAGGACACCTTGTTCCCAGGCCCTGCAATCCACCAAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR CCA 90 bp CACCACCAGTTCAGCAGGTTGCTGATGAGGCCCCTGGTGCAGTCCTaGGACCCTGTGCAGGGCCTCCTCAAACACCTGCCTTGTTGGGCC +
Preference number: 1 (lower is better)
Translates to: HHQFSRLLMRPLVQS*DPVQGLLKHLPCWA
Trigger: GGCCCAACAAGGCAGGTGTTTGAGGAGGCCCTGCACAGGGTCCCAGGACTGCACCAGGGGCCTCATCAGCAACCTGCTGAACTGGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR GCA 90 bp CACCAGCCCACCTGGCTGCCCAGGTTCCAAGTGAAGGAAAGAGGCTaGCAAACCGAGCCCTGCCCCAAGGCGAATAGCCATGGACATAGC +
Preference number: 1 (lower is better)
Translates to: HQPTWLPRFQVKERG*QTEPCPKANSHGHS
Trigger: GCTATGTCCATGGCTATTCGCCTTGGGGCAGGGCTCGGTTTGGCAGCCTCTTTCCTTCACTTGGAACCTGGGCAGCCAGGTGGGCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR CCA 90 bp AAGGGGGCCTGCGCTGGGCAGTGGAGCAGGCTTTGCTGCTTTATCTaGCAGCAACAGTTTGTTCTCGAGCTCCACTGGCCAACTGATAGG +
Preference number: 1 (lower is better)
Translates to: KGACAGQWSRLCCFI*QQQFVLELHWPTDR
Trigger: CCTATCAGTTGGCCAGTGGAGCTCGAGAACAAACTGTTGCTGCCAGATAAAGCAGCAAAGCCTGCTCCACTGCCCAGCGCAGGCCCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR CCA 90 bp CTTTGCTGCTTTATCTGGCAGCAACAGTTTGTTCTCGAGCTCCACTaGCCAACTGATAGGGAGAGGCACAGGAGCCCATGTGGGATGGAG +
Preference number: 1 (lower is better)
Translates to: LCCFIWQQQFVLELH*PTDRERHRSPCGME
Trigger: CTCCATCCCACATGGGCTCCTGTGCCTCTCCCTATCAGTTGGCCAGTGGAGCTCGAGAACAAACTGTTGCTGCCAGATAAAGCAGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR GCA 90 bp GGGATCAGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCCGGCCATGCCCGCCCTaGTGCAGTGGAGCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: GIRGAPTSWRAAESHQPTRPCPP*CSGAAA
Trigger: AGCAGCAGCTCCACTGCAGCAGGGCGGGCATGGCCG...GGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCTGATCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR GCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCAGCCAGGCCCTCAGGTaGAGCTCAGGCCTCTGCCGC +
Preference number: 2 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLSQALR*SSGLCR
Trigger: GCGGCAGAGGCCTGAGCTGCACCTGAGGGCCTGGCT...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332324.5
ENST00000645871.1
3UTR-3UTR GCA 90 bp GGCCTCCTGGGGGAAGACGGATGCTTGCAGCTAGCTCCGTGCCTGCCCGACTCCCCTGGGGATCAGGGGTaGCCCAACCTCGTGGAGGGC +
Preference number: 2 (lower is better)
Translates to: GLLGEDGCLQLAPCLPDSPGDQG*PNLVEG
Trigger: GCCCTCCACGAGGTTGGGGCACCCCTGATCCCCAGG...GGAGTCGGGCAGGCACGGAGCTAGCTGCAAGCATCCGTCTTCCCCCAGGAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp AGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCTGGCTGCAGGCCCCAGGCCCCTaGCAGGCTGAAGAGGTCACT +
Preference number: 2 (lower is better)
Translates to: RGAPTSWRAAESHQPTWLQAPGP*QAEEVT
Trigger: AGTGACCTCTTCAGCCTGCCAGGGGCCTGGGGCCTG...CAGCCAGGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR GCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGAGCCAGGCCCTCAGGTaGAGCTCAGGCCTCTGCCGC +
Preference number: 2 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGSQALR*SSGLCR
Trigger: GCGGCAGAGGCCTGAGCTGCACCTGAGGGCCTGGCT...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332324.5
ENST00000645871.1
3UTR-3UTR GCA 90 bp GGCCAGAGTGCCGATTCCCGCACACCCAGCAGGAGTAGCACCAGGAGAGGACGCTCCCCCTACCGGCCATaGCCGCCCTGCTGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: GQSADSRTPSRSSTRRGRSPYRP*PPCCSG
Trigger: TCCACTGCAGCAGGGCGGGCATGGCCGGTAGGGGGA...GCGTCCTCTCCTGGTGCTACTCCTGCTGGGTGTGCGGGAATCGGCACTCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp GGGAGAGGCACAGGAGCCCATGTGGGATGGAGGAGTCGGCCCCACACCCATCCCCTCCCCGGCAGGTCCTaGGACAGCTGTCCACACAGC +
Preference number: 2 (lower is better)
Translates to: GRGTGAHVGWRSRPHTHPLPGRS*DSCPHS
Trigger: GCTGTGTGGACAGCTGTCCCAGGACCTGCCGGGGAG...GGGATGGGTGTGGGGCCGACTCCTCCATCCCACATGGGCTCCTGTGCCTCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp GGCCTCCTGGGGGAAGACGGATGCTTGCAGCTAGCTCCGTGCCTGCCCGACTCCAGGGCAAGGCAGGCCTaGGGATCAGGGGTGCCCCAA +
Preference number: 2 (lower is better)
Translates to: GLLGEDGCLQLAPCLPDSRARQA*GSGVPQ
Trigger: TTGGGGCACCCCTGATCCCCAGGCCTGCCTTGCCCT...GGAGTCGGGCAGGCACGGAGCTAGCTGCAAGCATCCGTCTTCCCCCAGGAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp GGCCTCCTGGGGGAAGACGGATGCTTGCAGCTAGCTCCGTGCCTGCCCGACTCCGGAGCCCATGTGGGATaGAGGAGTCGGCCCCACACC +
Preference number: 2 (lower is better)
Translates to: GLLGEDGCLQLAPCLPDSGAHVG*RSRPHT
Trigger: GGTGTGGGGCCGACTCCTCCATCCCACATGGGCTCC...GGAGTCGGGCAGGCACGGAGCTAGCTGCAAGCATCCGTCTTCCCCCAGGAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR TCA 90 bp CGGACAGGTGATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGTGCTGTCGCCATCCCTaGGGGGTGCAGGACAGAGCC +
Preference number: 2 (lower is better)
Translates to: RTGDAGRAHCLSARASTLCCRHP*GVQDRA
Trigger: GGCTCTGTCCTGCACCCCTCAGGGATGGCGACAGCA...CAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATCACCTGTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR GCA 90 bp GGCCTCCTGGGGGAAGACGGATGCTTGCAGCTAGCTCCGTGCCTGCCCGACTCCGGGACCAGAGGAGGATaGTGTGCAGCCAGGCCCATC +
Preference number: 2 (lower is better)
Translates to: GLLGEDGCLQLAPCLPDSGTRGG*CAARPI
Trigger: GATGGGCCTGGCTGCACAGCATCCTCCTCTGGTCCC...GGAGTCGGGCAGGCACGGAGCTAGCTGCAAGCATCCGTCTTCCCCCAGGAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp CGGACAGGTGATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGCAGGCCCCAGGCCCCTaGCAGGCTGAAGAGGTCACT +
Preference number: 2 (lower is better)
Translates to: RTGDAGRAHCLSARASTLQAPGP*QAEEVT
Trigger: AGTGACCTCTTCAGCCTGCCAGGGGCCTGGGGCCTG...CAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATCACCTGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp GGGCGCCTCACCTTGGCCCTGGGGGTCTCTGGTTGTCACAGGACCACCAGGAACATGGGGGCGTCTGCCTaGCCTTGCACTCCCCCTACC +
Preference number: 2 (lower is better)
Translates to: GRLTLALGVSGCHRTTRNMGASA*PCTPPT
Trigger: GGTAGGGGGAGTGCAAGGCCAGGCAGACGCCCCCAT...GTTCCTGGTGGTCCTGTGACAACCAGAGACCCCCAGGGCCAAGGTGAGGCGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp CTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGTGGACTGCCCATCCCTaGGCCATCCTGGCTGGAGCC +
Preference number: 2 (lower is better)
Translates to: LSARASTLCRHGEREPVPWTAHP*AILAGA
Trigger: GGCTCCAGCCAGGATGGCCCAGGGATGGGCAGTCCA...CGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGGTGCTGGCTCTGGCAGAAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp GGCGCCTCACCTTGGCCCTGGGGGTCTCTGGTTGTCACAGGACCACCAGGAACCTGGACTGCCCATCCCTaGGCCATCCTGGCTGGAGCC +
Preference number: 2 (lower is better)
Translates to: GASPWPWGSLVVTGPPGTWTAHP*AILAGA
Trigger: GGCTCCAGCCAGGATGGCCCAGGGATGGGCAGTCCA...GGTTCCTGGTGGTCCTGTGACAACCAGAGACCCCCAGGGCCAAGGTGAGGCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp GGCCTCCTGGGGGAAGACGGATGCTTGCAGCTAGCTCCGTGCCTGCCCGACTCCCCCACCAGCCCCCACTaGGGTAGAGGGAGGATACCA +
Preference number: 2 (lower is better)
Translates to: GLLGEDGCLQLAPCLPDSPTSPH*GRGRIP
Trigger: TGGTATCCTCCCTCTACCCCAGTGGGGGCTGGTGGG...GGAGTCGGGCAGGCACGGAGCTAGCTGCAAGCATCCGTCTTCCCCCAGGAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR TCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCTGGCAGCGGGTGTaGGGTGGCAGTGAGAAGCCA +
Preference number: 2 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGLWQRV*GGSEKP
Trigger: TGGCTTCTCACTGCCACCTCACACCCGCTGCCAGAG...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
3UTR-3UTR TCA 90 bp GGGATCAGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCTTGACCATCCTGCACTaGGGGCCAGAGTGCCGATTC +
Preference number: 2 (lower is better)
Translates to: GIRGAPTSWRAAESHQPTLTILH*GPECRF
Trigger: GAATCGGCACTCTGGCCCTCAGTGCAGGATGGTCAA...GGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCTGATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR GCA 90 bp CGGACAGGTGATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGGGGACCAGAGGAGGATaGTGTGCAGCCAGGCCCATC +
Preference number: 2 (lower is better)
Translates to: RTGDAGRAHCLSARASTLGTRGG*CAARPI
Trigger: GATGGGCCTGGCTGCACAGCATCCTCCTCTGGTCCC...CAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATCACCTGTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR GCA 90 bp GGCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTCTGCTGCAGTGGAGCTaGTGCTCCCCGGCAGGTCCT +
Preference number: 2 (lower is better)
Translates to: GWSPLPANPGPTSSQAEALLQWS*CSPAGP
Trigger: AGGACCTGCCGGGGAGCAGCAGCTCCACTGCAGCAG...AGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR GCA 90 bp TGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGAGGGGAATGGGGGCGTCTaGCTGGCCTTGCACTCCCCC +
Preference number: 2 (lower is better)
Translates to: WSPLPANPGPTSSQAEAEGNGGV*LALHSP
Trigger: GGGGGAGTGCAAGGCCAGGCAGACGCCCCCATTCCC...CTCAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR GCA 90 bp CCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACCCTGGGGATCAGGGGTaGCCCAACCTCGTGGAGGGC +
Preference number: 2 (lower is better)
Translates to: PCVGTGNGSLSRSFRVLHPGDQG*PNLVEG
Trigger: GCCCTCCACGAGGTTGGGGCACCCCTGATCCCCAGG...GTGGAGAACCCTAAAGCTACGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp GACACCCTCGGACCCGGGGCAGGGTCAGCAAGACTCCCAGCTGGCATCAGACTGGCAGAGAGGCCTCCCTaGGACCAGAGGAGGATGCTG +
Preference number: 2 (lower is better)
Translates to: DTLGPGAGSARLPAGIRLAERPP*DQRRML
Trigger: CAGCATCCTCCTCTGGTCCCAGGGAGGCCTCTCTGC...CAGTCTGATGCCAGCTGGGAGTCTTGCTGACCCTGCCCCGGGTCCGAGGGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp GATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACCTCCCCGGCAGGTCCTaGGACAGCTGTCCACACAGC +
Preference number: 2 (lower is better)
Translates to: DAGRAHCLSARASTLCRHLPGRS*DSCPHS
Trigger: GCTGTGTGGACAGCTGTCCCAGGACCTGCCGGGGAG...GTGCCTACACAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp CTTCCCAAGGTGTTCGCACTCGGACAGGTGATGCGGGGCGGGCACACTGTCTTTCCCGCCCTGCTGCAGTaGAGCTGCTGCTCCCCGGCA +
Preference number: 2 (lower is better)
Translates to: LPKVFALGQVMRGGHTVFPALLQ*SCCSPA
Trigger: TGCCGGGGAGCAGCAGCTCCACTGCAGCAGGGCGGG...AAAGACAGTGTGCCCGCCCCGCATCACCTGTCCGAGTGCGAACACCTTGGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp TGCAGGGCTGCGCTGTCTGCACTGCCCAGCCTGGTGCCAGAAGAGCAGAGGGCACTAGGTAGGGGAGTGTaGGGAATGGGGGCGTCTGCC +
Preference number: 2 (lower is better)
Translates to: CRAALSALPSLVPEEQRALGRGV*GMGASA
Trigger: GGCAGACGCCCCCATTCCCCACACTCCCCTACCTAG...TGCCCTCTGCTCTTCTGGCACCAGGCTGGGCAGTGCAGACAGCGCAGCCCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp GGCGCCTCACCTTGGCCCTGGGGGTCTCTGGTTGTCACAGGACCACCAGGAACCCTGGGCCATCCTGGCTaGAGCCCACTTCCCGCAAAC +
Preference number: 2 (lower is better)
Translates to: GASPWPWGSLVVTGPPGTLGHPG*SPLPAN
Trigger: GTTTGCGGGAAGTGGGCTCCAGCCAGGATGGCCCAG...GGTTCCTGGTGGTCCTGTGACAACCAGAGACCCCCAGGGCCAAGGTGAGGCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp GGGCGCCTCACCTTGGCCCTGGGGGTCTCTGGTTGTCACAGGACCACCAGGAACCCCACCAGCCCCCACTaGGGTAGAGGGAGGATACCA +
Preference number: 2 (lower is better)
Translates to: GRLTLALGVSGCHRTTRNPTSPH*GRGRIP
Trigger: TGGTATCCTCCCTCTACCCCAGTGGGGGCTGGTGGG...GTTCCTGGTGGTCCTGTGACAACCAGAGACCCCCAGGGCCAAGGTGAGGCGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR GCA 90 bp CTTCCCAAGGTGTTCGCACTCGGACAGGTGATGCGGGGCGGGCACACTGTCTTTGGGAATGGGGGCGTCTaGCTGGCCTTGCACTCCCCC +
Preference number: 2 (lower is better)
Translates to: LPKVFALGQVMRGGHTVFGNGGV*LALHSP
Trigger: GGGGGAGTGCAAGGCCAGGCAGACGCCCCCATTCCC...AAAGACAGTGTGCCCGCCCCGCATCACCTGTCCGAGTGCGAACACCTTGGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR GCA 90 bp GGGAGAGGCACAGGAGCCCATGTGGGATGGAGGAGTCGGCCCCACACCCATCCCGCTGAGCACGGTGGGTaGAAGTTGACCATCCTGCAC +
Preference number: 2 (lower is better)
Translates to: GRGTGAHVGWRSRPHTHPAEHGG*KLTILH
Trigger: GTGCAGGATGGTCAACTTGCACCCACCGTGCTCAGC...GGGATGGGTGTGGGGCCGACTCCTCCATCCCACATGGGCTCCTGTGCCTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR GCA 90 bp TGCAGGGCTGCGCTGTCTGCACTGCCCAGCCTGGTGCCAGAAGAGCAGAGGGCAGTGAAGGAAAGAGGCTaGCAAACCGAGCCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: CRAALSALPSLVPEEQRAVKERG*QTEPCP
Trigger: GGGGCAGGGCTCGGTTTGGCAGCCTCTTTCCTTCAC...TGCCCTCTGCTCTTCTGGCACCAGGCTGGGCAGTGCAGACAGCGCAGCCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp GGCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGCAGAGAGGCCTCCCTaGGACCAGAGGAGGATGCTG +
Preference number: 2 (lower is better)
Translates to: GWSPLPANPGPTSSQAEAAERPP*DQRRML
Trigger: CAGCATCCTCCTCTGGTCCCAGGGAGGCCTCTCTGC...AGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp GGCCAGAGTGCCGATTCCCGCACACCCAGCAGGAGTAGCACCAGGAGAGGACGCCTGTCCACACAGCTCTaGCACTCGCCCTTGTGGGTG +
Preference number: 2 (lower is better)
Translates to: GQSADSRTPSRSSTRRGRLSTQL*HSPLWV
Trigger: CACCCACAAGGGCGAGTGCCAGAGCTGTGTGGACAG...GCGTCCTCTCCTGGTGCTACTCCTGCTGGGTGTGCGGGAATCGGCACTCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp GATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACACCAGAAAGGCCCTGTaGACTGCCCATCCCTGGGCC +
Preference number: 2 (lower is better)
Translates to: DAGRAHCLSARASTLCRHTRKAL*TAHPWA
Trigger: GGCCCAGGGATGGGCAGTCCACAGGGCCTTTCTGGT...GTGCCTACACAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp CCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACGAAGGGGGCCTGCGCTaGGCAGTGGAGCAGGCTTTG +
Preference number: 2 (lower is better)
Translates to: PCVGTGNGSLSRSFRVLHEGGLR*AVEQAL
Trigger: CAAAGCCTGCTCCACTGCCCAGCGCAGGCCCCCTTC...GTGGAGAACCCTAAAGCTACGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR TCA 90 bp GATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACACGGTGGGTGCAAGTTaGCCATCCTGCACTGAGGGC +
Preference number: 2 (lower is better)
Translates to: DAGRAHCLSARASTLCRHTVGAS*PSCTEG
Trigger: GCCCTCAGTGCAGGATGGTCAACTTGCACCCACCGT...GTGCCTACACAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR GCA 90 bp GGCGCCTCACCTTGGCCCTGGGGGTCTCTGGTTGTCACAGGACCACCAGGAACCTGCCAAACCGAGCCCTaGCCCAAGGCGAATAGCCAT +
Preference number: 2 (lower is better)
Translates to: GASPWPWGSLVVTGPPGTCQTEP*PKANSH
Trigger: ATGGCTATTCGCCTTGGGGCAGGGCTCGGTTTGGCA...GGTTCCTGGTGGTCCTGTGACAACCAGAGACCCCCAGGGCCAAGGTGAGGCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR GCA 90 bp CGGACAGGTGATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGTGCCAAACCGAGCCCTaGCCCAAGGCGAATAGCCAT +
Preference number: 2 (lower is better)
Translates to: RTGDAGRAHCLSARASTLCQTEP*PKANSH
Trigger: ATGGCTATTCGCCTTGGGGCAGGGCTCGGTTTGGCA...CAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATCACCTGTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp GGCCTCCTGGGGGAAGACGGATGCTTGCAGCTAGCTCCGTGCCTGCCCGACTCCAGCAAGACTCCCAGCTaGCATCAGACTGTGTCTGGC +
Preference number: 2 (lower is better)
Translates to: GLLGEDGCLQLAPCLPDSSKTPS*HQTVSG
Trigger: GCCAGACACAGTCTGATGCCAGCTGGGAGTCTTGCT...GGAGTCGGGCAGGCACGGAGCTAGCTGCAAGCATCCGTCTTCCCCCAGGAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp AGGGAGGATACCACCAAGGGAGCCCACCCTCCCCTCACACCACCAGTTCAGCAGCTGGGCCATCCTGGCTaGAGCCCACTTCCCGCAAAC +
Preference number: 2 (lower is better)
Translates to: REDTTKGAHPPLTPPVQQLGHPG*SPLPAN
Trigger: GTTTGCGGGAAGTGGGCTCCAGCCAGGATGGCCCAG...CTGCTGAACTGGTGGTGTGAGGGGAGGGTGGGCTCCCTTGGTGGTATCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp CCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACAGCCACCAGCCCACCTaGCTGCCCAGGTTCCAAGTG +
Preference number: 2 (lower is better)
Translates to: PCVGTGNGSLSRSFRVLHSHQPT*LPRFQV
Trigger: CACTTGGAACCTGGGCAGCCAGGTGGGCTGGTGGCT...GTGGAGAACCCTAAAGCTACGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp GGGAGAGGCACAGGAGCCCATGTGGGATGGAGGAGTCGGCCCCACACCCATCCCGTGGATTGCAGGGCCTaGGAACAAGGTGTCCTGAAG +
Preference number: 2 (lower is better)
Translates to: GRGTGAHVGWRSRPHTHPVDCRA*EQGVLK
Trigger: CTTCAGGACACCTTGTTCCCAGGCCCTGCAATCCAC...GGGATGGGTGTGGGGCCGACTCCTCCATCCCACATGGGCTCCTGTGCCTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR TCA 90 bp TGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGAGTGGACAGCACTTTATTaGCACCCTCGGACCCGGGGC +
Preference number: 2 (lower is better)
Translates to: WSPLPANPGPTSSQAEAEWTALY*HPRTRG
Trigger: GCCCCGGGTCCGAGGGTGTCAATAAAGTGCTGTCCA...CTCAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR GCA 90 bp GGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACTCAGCCTGGTGGAGGAAGGGAACTGCTGCAGTGGAGCTaGTGCTCCCCGGCAGGTCCT +
Preference number: 2 (lower is better)
Translates to: GACPVALGFSTQPGGGRELLQWS*CSPAGP
Trigger: AGGACCTGCCGGGGAGCAGCAGCTCCACTGCAGCAG...TTCCCTTCCTCCACCAGGCTGAGTGGAGAACCCTAAAGCTACGGGACAGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR GCA 90 bp CCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACAGGTGTCCTGAAGGCTaGAGGGCTGCGCTGTCTGCA +
Preference number: 2 (lower is better)
Translates to: PCVGTGNGSLSRSFRVLHRCPEG*RAALSA
Trigger: TGCAGACAGCGCAGCCCTGCAGCCTTCAGGACACCT...GTGGAGAACCCTAAAGCTACGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR GCA 90 bp CTTCCCAAGGTGTTCGCACTCGGACAGGTGATGCGGGGCGGGCACACTGTCTTTCAGGGCCCAAGGAGATaGCTCCATCTCAGGGCCCAC +
Preference number: 2 (lower is better)
Translates to: LPKVFALGQVMRGGHTVFQGPRR*LHLRAH
Trigger: GTGGGCCCTGAGATGGAGGCATCTCCTTGGGCCCTG...AAAGACAGTGTGCCCGCCCCGCATCACCTGTCCGAGTGCGAACACCTTGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp CCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACCTGTCCACACAGCTCTaGCACTCGCCCTTGTGGGTG +
Preference number: 2 (lower is better)
Translates to: PCVGTGNGSLSRSFRVLHLSTQL*HSPLWV
Trigger: CACCCACAAGGGCGAGTGCCAGAGCTGTGTGGACAG...GTGGAGAACCCTAAAGCTACGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp GGGAGAGGCACAGGAGCCCATGTGGGATGGAGGAGTCGGCCCCACACCCATCCCAAACACCTGCCTTGTTaGGCCATAGCTGCAGGTCTG +
Preference number: 2 (lower is better)
Translates to: GRGTGAHVGWRSRPHTHPKHLPC*AIAAGL
Trigger: CAGACCTGCAGCTATGGCCCAACAAGGCAGGTGTTT...GGGATGGGTGTGGGGCCGACTCCTCCATCCCACATGGGCTCCTGTGCCTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR TCA 90 bp GGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACTCAGCCTGGTGGAGGAAGGGAACTCTGGCAGCGGGTGTaGGGTGGCAGTGAGAAGCCA +
Preference number: 2 (lower is better)
Translates to: GACPVALGFSTQPGGGRELWQRV*GGSEKP
Trigger: TGGCTTCTCACTGCCACCTCACACCCGCTGCCAGAG...TTCCCTTCCTCCACCAGGCTGAGTGGAGAACCCTAAAGCTACGGGACAGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR GCA 90 bp CTTCCCAAGGTGTTCGCACTCGGACAGGTGATGCGGGGCGGGCACACTGTCTTTAAAGGCCCTGTGGACTaGCCATCCCTGGGCCATCCT +
Preference number: 2 (lower is better)
Translates to: LPKVFALGQVMRGGHTVFKGPVD*PSLGHP
Trigger: AGGATGGCCCAGGGATGGGCAGTCCACAGGGCCTTT...AAAGACAGTGTGCCCGCCCCGCATCACCTGTCCGAGTGCGAACACCTTGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR GCA 90 bp GGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACTCAGCCTGGTGGAGGAAGGGAACAGGGCCCAAGGAGATaGCTCCATCTCAGGGCCCAC +
Preference number: 2 (lower is better)
Translates to: GACPVALGFSTQPGGGREQGPRR*LHLRAH
Trigger: GTGGGCCCTGAGATGGAGGCATCTCCTTGGGCCCTG...TTCCCTTCCTCCACCAGGCTGAGTGGAGAACCCTAAAGCTACGGGACAGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp GATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACGTGGATTGCAGGGCCTaGGAACAAGGTGTCCTGAAG +
Preference number: 2 (lower is better)
Translates to: DAGRAHCLSARASTLCRHVDCRA*EQGVLK
Trigger: CTTCAGGACACCTTGTTCCCAGGCCCTGCAATCCAC...GTGCCTACACAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR TCA 90 bp GGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACTCAGCCTGGTGGAGGAAGGGAAACGGTGGGTGCAAGTTaGCCATCCTGCACTGAGGGC +
Preference number: 2 (lower is better)
Translates to: GACPVALGFSTQPGGGRETVGAS*PSCTEG
Trigger: GCCCTCAGTGCAGGATGGTCAACTTGCACCCACCGT...TTCCCTTCCTCCACCAGGCTGAGTGGAGAACCCTAAAGCTACGGGACAGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp GCCCCATCTATCCAGCTTGGTGGATTGCAGGGCCTGGGAACAAGGTGTCCTGAACTAGGTAGGGGAGTGTaGGGAATGGGGGCGTCTGCC +
Preference number: 2 (lower is better)
Translates to: APSIQLGGLQGLGTRCPELGRGV*GMGASA
Trigger: GGCAGACGCCCCCATTCCCCACACTCCCCTACCTAG...TTCAGGACACCTTGTTCCCAGGCCCTGCAATCCACCAAGCTGGATAGATGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp GGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACTCAGCCTGGTGGAGGAAGGGAAGCATCAGACTGTGTCTaGCCTGCTGTCGCCATCCCT +
Preference number: 2 (lower is better)
Translates to: GACPVALGFSTQPGGGREASDCV*PAVAIP
Trigger: AGGGATGGCGACAGCAGGCCAGACACAGTCTGATGC...TTCCCTTCCTCCACCAGGCTGAGTGGAGAACCCTAAAGCTACGGGACAGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp CTTCCCAAGGTGTTCGCACTCGGACAGGTGATGCGGGGCGGGCACACTGTCTTTGTTCTCGAGCTCCACTaGCCAACTGATAGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: LPKVFALGQVMRGGHTVFVLELH*PTDRER
Trigger: CCTCTCCCTATCAGTTGGCCAGTGGAGCTCGAGAAC...AAAGACAGTGTGCCCGCCCCGCATCACCTGTCCGAGTGCGAACACCTTGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR TCA 90 bp GGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACTCAGCCTGGTGGAGGAAGGGAAAGAGGACGCCTGAGCTaGGCTTTTCTAGGTAGGGGA +
Preference number: 2 (lower is better)
Translates to: GACPVALGFSTQPGGGRERGRLS*AFLGRG
Trigger: TCCCCTACCTAGAAAAGCTCAGCTCAGGCGTCCTCT...TTCCCTTCCTCCACCAGGCTGAGTGGAGAACCCTAAAGCTACGGGACAGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR GCA 90 bp CCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACTGGAGCAGGCTTTGCTaGTTTATCTGGCAGCAACAG +
Preference number: 2 (lower is better)
Translates to: PCVGTGNGSLSRSFRVLHWSRLC*FIWQQQ
Trigger: CTGTTGCTGCCAGATAAAGCAGCAAAGCCTGCTCCA...GTGGAGAACCCTAAAGCTACGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp CTTCCCAAGGTGTTCGCACTCGGACAGGTGATGCGGGGCGGGCACACTGTCTTTATCTATCCAGCTTGGTaGATTGCAGGGCCTGGGAAC +
Preference number: 2 (lower is better)
Translates to: LPKVFALGQVMRGGHTVFIYPAW*IAGPGN
Trigger: GTTCCCAGGCCCTGCAATCCACCAAGCTGGATAGAT...AAAGACAGTGTGCCCGCCCCGCATCACCTGTCCGAGTGCGAACACCTTGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp CTTCCCAAGGTGTTCGCACTCGGACAGGTGATGCGGGGCGGGCACACTGTCTTTAAACACCTGCCTTGTTaGGCCATAGCTGCAGGTCTG +
Preference number: 2 (lower is better)
Translates to: LPKVFALGQVMRGGHTVFKHLPC*AIAAGL
Trigger: CAGACCTGCAGCTATGGCCCAACAAGGCAGGTGTTT...AAAGACAGTGTGCCCGCCCCGCATCACCTGTCCGAGTGCGAACACCTTGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp CAGCAACAGTTTGTTCTCGAGCTCCACTGGCCAACTGATAGGGAGAGGCACAGGGCATCAGACTGTGTCTaGCCTGCTGTCGCCATCCCT +
Preference number: 2 (lower is better)
Translates to: QQQFVLELHWPTDRERHRASDCV*PAVAIP
Trigger: AGGGATGGCGACAGCAGGCCAGACACAGTCTGATGC...CCTGTGCCTCTCCCTATCAGTTGGCCAGTGGAGCTCGAGAACAAACTGTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp GGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACTCAGCCTGGTGGAGGAAGGGAAATCTATCCAGCTTGGTaGATTGCAGGGCCTGGGAAC +
Preference number: 2 (lower is better)
Translates to: GACPVALGFSTQPGGGREIYPAW*IAGPGN
Trigger: GTTCCCAGGCCCTGCAATCCACCAAGCTGGATAGAT...TTCCCTTCCTCCACCAGGCTGAGTGGAGAACCCTAAAGCTACGGGACAGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CCA 90 bp GGCGCCTCACCTTGGCCCTGGGGGTCTCTGGTTGTCACAGGACCACCAGGAACCCTTTGCTGCTTTATCTaGCAGCAACAGTTTGTTCTC +
Preference number: 2 (lower is better)
Translates to: GASPWPWGSLVVTGPPGTLCCFI*QQQFVL
Trigger: GAGAACAAACTGTTGCTGCCAGATAAAGCAGCAAAG...GGTTCCTGGTGGTCCTGTGACAACCAGAGACCCCCAGGGCCAAGGTGAGGCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR CAA 90 bp CTGGGCAGTGGAGCAGGCTTTGCTGCTTTATCTGGCAGCAACAGTTaGTTCTCGAGCTCCACTGGCCAACTGATAGGGAGAGGCACAGGA +
Preference number: 2 (lower is better)
Translates to: LGSGAGFAALSGSNS*FSSSTGQLIGRGTG
Trigger: TCCTGTGCCTCTCCCTATCAGTTGGCCAGTGGAGCTCGAGAACAAACTGTTGCTGCCAGATAAAGCAGCAAAGCCTGCTCCACTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR GCA 90 bp AGATCTATAAACAGACAGGCTCTATGCTATGGCCTCCATGTGTTTCCTCTGTCCCTGCAGTGGAGCTGCTaGTCCCCGGCAGGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: RSINRQALCYGLHVFPLSLQWSC*SPAGPG
Trigger: CCCAGGACCTGCCGGGGAGCAGCAGCTCCACTGCAG...GGACAGAGGAAACACATGGAGGCCATAGCATAGAGCCTGTCTGTTTATAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR GCA 90 bp AGATCTATAAACAGACAGGCTCTATGCTATGGCCTCCATGTGTTTCCTCTGTCCTCCCCCTACCGGCCATaGCCGCCCTGCTGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: RSINRQALCYGLHVFPLSSPYRP*PPCCSG
Trigger: TCCACTGCAGCAGGGCGGGCATGGCCGGTAGGGGGA...GGACAGAGGAAACACATGGAGGCCATAGCATAGAGCCTGTCTGTTTATAGATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR TCA 90 bp AGATCTATAAACAGACAGGCTCTATGCTATGGCCTCCATGTGTTTCCTCTGTCCTGGACAGCACTTTATTaGCACCCTCGGACCCGGGGC +
Preference number: 2 (lower is better)
Translates to: RSINRQALCYGLHVFPLSWTALY*HPRTRG
Trigger: GCCCCGGGTCCGAGGGTGTCAATAAAGTGCTGTCCA...GGACAGAGGAAACACATGGAGGCCATAGCATAGAGCCTGTCTGTTTATAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR GCA 90 bp AGATCTATAAACAGACAGGCTCTATGCTATGGCCTCCATGTGTTTCCTCTGTCCTCCAGCTTGGTGGATTaGAGGGCCTGGGAACAAGGT +
Preference number: 2 (lower is better)
Translates to: RSINRQALCYGLHVFPLSSSLVD*RAWEQG
Trigger: ACCTTGTTCCCAGGCCCTGCAATCCACCAAGCTGGA...GGACAGAGGAAACACATGGAGGCCATAGCATAGAGCCTGTCTGTTTATAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR GCA 90 bp AGATCTATAAACAGACAGGCTCTATGCTATGGCCTCCATGTGTTTCCTCTGTCCGGACCAGCATGTGCTTaGAGTTCTTTATTGAGGGAC +
Preference number: 2 (lower is better)
Translates to: RSINRQALCYGLHVFPLSGPACA*SSLLRD
Trigger: GTCCCTCAATAAAGAACTGCAAGCACATGCTGGTCC...GGACAGAGGAAACACATGGAGGCCATAGCATAGAGCCTGTCTGTTTATAGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CAA 90 bp GGCCTCCTGGGGGAAGACGGATGCTTGCAGCTAGCTCCGTGCCTGCCCGACTCCGGTGGGCGCCTCACCTaGGCCCTGGGGGTCTCTGGT +
Preference number: 3 (lower is better)
Translates to: GLLGEDGCLQLAPCLPDSGGRLT*ALGVSG
Trigger: ACCAGAGACCCCCAGGGCCAAGGTGAGGCGCCCACC...GGAGTCGGGCAGGCACGGAGCTAGCTGCAAGCATCCGTCTTCCCCCAGGAGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR CCA 72 bp GAAAGGCCCTGTGGACTGCCCATCCCTGGGCCATCCTaGCTGGAGCCCACTTCCCGCAAACCCAGGGCCGAC +
Preference number: 3 (lower is better)
Translates to: ERPCGLPIPGPS*LEPTSRKPRAD
Trigger: GTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGCCAGGATGGCCCAGGGATGGGCAGTCCACAGGGCCTTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR CCA 72 bp AAGGCTGCAGGGCTGCGCTGTCTGCACTGCCCAGCCTaGTGCCAGAAGAGCAGAGGGCAAGGCAGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: KAAGLRCLHCPA*CQKSRGQGRPG
Trigger: CCCAGGCCTGCCTTGCCCTCTGCTCTTCTGGCACCAGGCTGGGCAGTGCAGACAGCGCAGCCCTGCAGCCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR CCA 72 bp CCTCGGACCCGGGGCAGGGTCAGCAAGACTCCCAGCTaGCATCAGACTGTGTCTGGCCTGCTGTCGCCATCC +
Preference number: 3 (lower is better)
Translates to: PRTRGRVSKTPS*HQTVSGLLSPS
Trigger: GGATGGCGACAGCAGGCCAGACACAGTCTGATGCCAGCTGGGAGTCTTGCTGACCCTGCCCCGGGTCCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CAA 90 bp GCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGCTCTGGCACTCGCCCTaGTGGGTGTGGCCATACCCC +
Preference number: 3 (lower is better)
Translates to: AGAHFPQTQGRPLPKLKLLWHSP*WVWPYP
Trigger: GGGGTATGGCCACACCCACAAGGGCGAGTGCCAGAG...CAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR GCA 72 bp GGATTGCAGGGCCTGGGAACAAGGTGTCCTGAAGGCTaGAGGGCTGCGCTGTCTGCACTGCCCAGCCTGGTG +
Preference number: 3 (lower is better)
Translates to: GLQGLGTRCPEG*RAALSALPSLV
Trigger: CACCAGGCTGGGCAGTGCAGACAGCGCAGCCCTGCAGCCTTCAGGACACCTTGTTCCCAGGCCCTGCAATCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR CCA 72 bp ACCCACACCAGAAAGGCCCTGTGGACTGCCCATCCCTaGGCCATCCTGGCTGGAGCCCACTTCCCGCAAACC +
Preference number: 3 (lower is better)
Translates to: THTRKALWTAHP*AILAGAHFPQT
Trigger: GGTTTGCGGGAAGTGGGCTCCAGCCAGGATGGCCCAGGGATGGGCAGTCCACAGGGCCTTTCTGGTGTGGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CAA 90 bp CTCCCCGGCAGGTCCTGGGACAGCTGTCCACACAGCTCTGGCACTCGCCCTTGTCTGGACAGCACTTTATaGACACCCTCGGACCCGGGG +
Preference number: 3 (lower is better)
Translates to: LPGRSWDSCPHSSGTRPCLDSTL*TPSDPG
Trigger: CCCCGGGTCCGAGGGTGTCAATAAAGTGCTGTCCAG...ACAAGGGCGAGTGCCAGAGCTGTGTGGACAGCTGTCCCAGGACCTGCCGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR TCA 72 bp GCTGAGCACGGTGGGTGCAAGTTGACCATCCTGCACTaGGGGCCAGAGTGCCGATTCCCGCACACCCAGCAG +
Preference number: 3 (lower is better)
Translates to: AEHGGCKLTILH*GPECRFPHTQQ
Trigger: CTGCTGGGTGTGCGGGAATCGGCACTCTGGCCCTCAGTGCAGGATGGTCAACTTGCACCCACCGTGCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR TCA 72 bp GGAACCCCCTTCCCAAGGTGTTCGCACTCGGACAGGTaGTGCGGGGCGGGCACACTGTCTTTCTGCCAGAGC +
Preference number: 3 (lower is better)
Translates to: GTPFPRCSHSDR*CGAGTLSFCQS
Trigger: GCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATCACCTGTCCGAGTGCGAACACCTTGGGAAGGGGGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR CCA 72 bp GGGCCCCATCTATCCAGCTTGGTGGATTGCAGGGCCTaGGAACAAGGTGTCCTGAAGGCTGCAGGGCTGCGC +
Preference number: 3 (lower is better)
Translates to: GPHLSSLVDCRA*EQGVLKAAGLR
Trigger: GCGCAGCCCTGCAGCCTTCAGGACACCTTGTTCCCAGGCCCTGCAATCCACCAAGCTGGATAGATGGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CAA 90 bp GGCCTCCTGGGGGAAGACGGATGCTTGCAGCTAGCTCCGTGCCTGCCCGACTCCGGGCCTGGTCCAGTCTaGGGGTCTTTAATCAAGCAG +
Preference number: 3 (lower is better)
Translates to: GLLGEDGCLQLAPCLPDSGPGPV*GSLIKQ
Trigger: CTGCTTGATTAAAGACCCCAAGACTGGACCAGGCCC...GGAGTCGGGCAGGCACGGAGCTAGCTGCAAGCATCCGTCTTCCCCCAGGAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CAA 90 bp AGGGAGGATACCACCAAGGGAGCCCACCCTCCCCTCACACCACCAGTTCAGCAGCTGGACAGCACTTTATaGACACCCTCGGACCCGGGG +
Preference number: 3 (lower is better)
Translates to: REDTTKGAHPPLTPPVQQLDSTL*TPSDPG
Trigger: CCCCGGGTCCGAGGGTGTCAATAAAGTGCTGTCCAG...CTGCTGAACTGGTGGTGTGAGGGGAGGGTGGGCTCCCTTGGTGGTATCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CAA 90 bp GGCGCCTCACCTTGGCCCTGGGGGTCTCTGGTTGTCACAGGACCACCAGGAACCCAAACACCTGCCTTGTaGGGCCATAGCTGCAGGTCT +
Preference number: 3 (lower is better)
Translates to: GASPWPWGSLVVTGPPGTQTPAL*GHSCRS
Trigger: AGACCTGCAGCTATGGCCCAACAAGGCAGGTGTTTG...GGTTCCTGGTGGTCCTGTGACAACCAGAGACCCCCAGGGCCAAGGTGAGGCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR CCA 72 bp TTCTTTATTGAGGGACCAGGGGTGGGCGCCTCACCTTaGCCCTGGGGGTCTCTGGTTGTCACAGGACCACCA +
Preference number: 3 (lower is better)
Translates to: FFIEGPGVGASP*PWGSLVVTGPP
Trigger: TGGTGGTCCTGTGACAACCAGAGACCCCCAGGGCCAAGGTGAGGCGCCCACCCCTGGTCCCTCAATAAAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR-3UTR CAA 90 bp CTTCCCAAGGTGTTCGCACTCGGACAGGTGATGCGGGGCGGGCACACTGTCTTTCCTCAAACACCTGCCTaGTTGGGCCATAGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: LPKVFALGQVMRGGHTVFPQTPA*LGHSCR
Trigger: CCTGCAGCTATGGCCCAACAAGGCAGGTGTTTGAGG...AAAGACAGTGTGCCCGCCCCGCATCACCTGTCCGAGTGCGAACACCTTGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR GCA 72 bp ACCTGGCTGCCCAGGTTCCAAGTGAAGGAAAGAGGCTaGCAAACCGAGCCCTGCCCCAAGGCGAATAGCCAT +
Preference number: 3 (lower is better)
Translates to: TWLPRFQVKERG*QTEPCPKANSH
Trigger: ATGGCTATTCGCCTTGGGGCAGGGCTCGGTTTGGCAGCCTCTTTCCTTCACTTGGAACCTGGGCAGCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR GCA 72 bp TTCCAAGTGAAGGAAAGAGGCTGCCAAACCGAGCCCTaGCCCAAGGCGAATAGCCATGGACATAGCCATTGT +
Preference number: 3 (lower is better)
Translates to: FQVKERGCQTEP*PKANSHGHSHC
Trigger: ACAATGGCTATGTCCATGGCTATTCGCCTTGGGGCAGGGCTCGGTTTGGCAGCCTCTTTCCTTCACTTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR CCA 72 bp TTTATCTGGCAGCAACAGTTTGTTCTCGAGCTCCACTaGCCAACTGATAGGGAGAGGCACAGGAGCCCATGT +
Preference number: 3 (lower is better)
Translates to: FIWQQQFVLELH*PTDRERHRSPC
Trigger: ACATGGGCTCCTGTGCCTCTCCCTATCAGTTGGCCAGTGGAGCTCGAGAACAAACTGTTGCTGCCAGATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp AGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCTGGCTGGCTCCCAGTGGCCGCTaGCCACGCCGGCGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: RGAPTSWRAAESHQPTWLAPSGR*PRRRLR
Trigger: ACGGAGACGCCGGCGTGGGCAGCGGCCACTGGGAGC...CAGCCAGGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCGCTCCCAGTGGCCGCTaGCCACGCCGGCGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLAPSGR*PRRRLR
Trigger: ACGGAGACGCCGGCGTGGGCAGCGGCCACTGGGAGC...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCGGCCGCAGCCAAGCGTaGGCCCGCCGGGTTCGTAGC +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLGRSQA*ARRVRS
Trigger: GCTACGAACCCGGCGGGCCCACGCTTGGCTGCGGCC...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp AGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCTGGCTGCCCGCCCTGCTGCAGTaGAGCTGCTGCTCCCCGGCA +
Preference number: 4 (lower is better)
Translates to: RGAPTSWRAAESHQPTWLPALLQ*SCCSPA
Trigger: TGCCGGGGAGCAGCAGCTCCACTGCAGCAGGGCGGG...CAGCCAGGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp AGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCTGGCTGAGCAGCAGTCCCGCCTaGTCCGTCAGGGCACCCACC +
Preference number: 4 (lower is better)
Translates to: RGAPTSWRAAESHQPTWLSSSPA*SVRAPT
Trigger: GGTGGGTGCCCTGACGGAGCAGGCGGGACTGCTGCT...CAGCCAGGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GGGATCAGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCCTGCAGTGGAGCTGCTaGTCCCCGGCAGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GIRGAPTSWRAAESHQPTLQWSC*SPAGPG
Trigger: CCCAGGACCTGCCGGGGAGCAGCAGCTCCACTGCAG...GGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCTGATCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp AGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCTGGCTGCCTGGGGATCAGGGGTaGCCCAACCTCGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: RGAPTSWRAAESHQPTWLPGDQG*PNLVEG
Trigger: GCCCTCCACGAGGTTGGGGCACCCCTGATCCCCAGG...CAGCCAGGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGGGCCGCAGCCAAGCGTaGGCCCGCCGGGTTCGTAGC +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGGRSQA*ARRVRS
Trigger: GCTACGAACCCGGCGGGCCCACGCTTGGCTGCGGCC...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp GACACCCTCGGACCCGGGGCAGGGTCAGCAAGACTCCCAGCTGGCATCAGACTGGGCCGCAGCCAAGCGTaGGCCCGCCGGGTTCGTAGC +
Preference number: 4 (lower is better)
Translates to: DTLGPGAGSARLPAGIRLGRSQA*ARRVRS
Trigger: GCTACGAACCCGGCGGGCCCACGCTTGGCTGCGGCC...CAGTCTGATGCCAGCTGGGAGTCTTGCTGACCCTGCCCCGGGTCCGAGGGTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp TGCAGGGCTGCGCTGTCTGCACTGCCCAGCCTGGTGCCAGAAGAGCAGAGGGCAGGCCGCAGCCAAGCGTaGGCCCGCCGGGTTCGTAGC +
Preference number: 4 (lower is better)
Translates to: CRAALSALPSLVPEEQRAGRSQA*ARRVRS
Trigger: GCTACGAACCCGGCGGGCCCACGCTTGGCTGCGGCC...TGCCCTCTGCTCTTCTGGCACCAGGCTGGGCAGTGCAGACAGCGCAGCCCTGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GGCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGCTCCCAGTGGCCGCTaGCCACGCCGGCGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: GWSPLPANPGPTSSQAEAAPSGR*PRRRLR
Trigger: ACGGAGACGCCGGCGTGGGCAGCGGCCACTGGGAGC...AGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCAGCAGCAGTCCCGCCTaGTCCGTCAGGGCACCCACC +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLSSSPA*SVRAPT
Trigger: GGTGGGTGCCCTGACGGAGCAGGCGGGACTGCTGCT...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR GCA 90 bp GGCCTCCTGGGGGAAGACGGATGCTTGCAGCTAGCTCCGTGCCTGCCCGACTCCGGGAATGGGGGCGTCTaGCTGGCCTTGCACTCCCCC +
Preference number: 4 (lower is better)
Translates to: GLLGEDGCLQLAPCLPDSGNGGV*LALHSP
Trigger: GGGGGAGTGCAAGGCCAGGCAGACGCCCCCATTCCC...GGAGTCGGGCAGGCACGGAGCTAGCTGCAAGCATCCGTCTTCCCCCAGGAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCGTCTCCGTCCTTGTTaGGGGCCGGGGCTGGCGCGT +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGRLRPC*GPGLAR
Trigger: ACGCGCCAGCCCCGGCCCCCAACAAGGACGGAGACG...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCAAGCATGGGCAGCCTTaGCCCTGGCCCTGCGGCACC +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLKHGQP*PWPCGT
Trigger: GGTGCCGCAGGGCCAGGGCCAAGGCTGCCCATGCTT...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332324.5
ENST00000645871.1
CDS-3UTR CCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCTGCCCCGTCGAAGCATaGGCAGCCTTGGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLCPVEA*AALALA
Trigger: GGCCAGGGCCAAGGCTGCCCATGCTTCGACGGGGCA...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332324.5
ENST00000645871.1
CDS-3UTR CCA 90 bp GGGATCAGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCATGGGGGCGTCTGCCTaGCCTTGCACTCCCCCTACC +
Preference number: 4 (lower is better)
Translates to: GIRGAPTSWRAAESHQPTMGASA*PCTPPT
Trigger: GGTAGGGGGAGTGCAAGGCCAGGCAGACGCCCCCAT...GGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCTGATCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp AGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCTGGCTGTGGACTGCCCATCCCTaGGCCATCCTGGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: RGAPTSWRAAESHQPTWLWTAHP*AILAGA
Trigger: GGCTCCAGCCAGGATGGCCCAGGGATGGGCAGTCCA...CAGCCAGGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp GGGATCAGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCGAGCCATCATGCCCGTaGACGCCCAGAGGCGGAACA +
Preference number: 4 (lower is better)
Translates to: GIRGAPTSWRAAESHQPTEPSCP*TPRGGT
Trigger: TGTTCCGCCTCTGGGCGTTCACGGGCATGATGGCTC...GGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCTGATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCTGCTGTCGCCATCCCTaGGGGGTGCAGGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLCCRHP*GVQDRA
Trigger: GGCTCTGTCCTGCACCCCTCAGGGATGGCGACAGCA...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR TCA 90 bp GGCCAGAGTGCCGATTCCCGCACACCCAGCAGGAGTAGCACCAGGAGAGGACGCTCGCACTCGGACAGGTaGTGCGGGGCGGGCACACTG +
Preference number: 4 (lower is better)
Translates to: GQSADSRTPSRSSTRRGRSHSDR*CGAGTL
Trigger: CAGTGTGCCCGCCCCGCATCACCTGTCCGAGTGCGA...GCGTCCTCTCCTGGTGCTACTCCTGCTGGGTGTGCGGGAATCGGCACTCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp CTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGTCGCACTCGGACAGGTaGTGCGGGGCGGGCACACTG +
Preference number: 4 (lower is better)
Translates to: LSARASTLCRHGEREPVPSHSDR*CGAGTL
Trigger: CAGTGTGCCCGCCCCGCATCACCTGTCCGAGTGCGA...CGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGGTGCTGGCTCTGGCAGAAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp TGCAGGGCTGCGCTGTCTGCACTGCCCAGCCTGGTGCCAGAAGAGCAGAGGGCAAGCAGCAGTCCCGCCTaGTCCGTCAGGGCACCCACC +
Preference number: 4 (lower is better)
Translates to: CRAALSALPSLVPEEQRASSSPA*SVRAPT
Trigger: GGTGGGTGCCCTGACGGAGCAGGCGGGACTGCTGCT...TGCCCTCTGCTCTTCTGGCACCAGGCTGGGCAGTGCAGACAGCGCAGCCCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGAGCAGCAGTCCCGCCTaGTCCGTCAGGGCACCCACC +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGSSSPA*SVRAPT
Trigger: GGTGGGTGCCCTGACGGAGCAGGCGGGACTGCTGCT...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR GCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGGCCAGGTTGGCCACGTaGAGCAGCAGTCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGARLAT*SSSPAC
Trigger: GCAGGCGGGACTGCTGCTGCACGTGGCCAACCTGGC...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR GCA 90 bp CTCCCCGGCAGGTCCTGGGACAGCTGTCCACACAGCTCTGGCACTCGCCCTTGTCGGCCATGCCCGCCCTaGTGCAGTGGAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LPGRSWDSCPHSSGTRPCRPCPP*CSGAAA
Trigger: AGCAGCAGCTCCACTGCAGCAGGGCGGGCATGGCCG...ACAAGGGCGAGTGCCAGAGCTGTGTGGACAGCTGTCCCAGGACCTGCCGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GGGAGAGGCACAGGAGCCCATGTGGGATGGAGGAGTCGGCCCCACACCCATCCCTGCGGTGGGTGGTGCTaGAATGAGGAGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GRGTGAHVGWRSRPHTHPCGGWC*NEEGPR
Trigger: CCTGGGCCCCTCCTCATTGCAGCACCACCCACCGCA...GGGATGGGTGTGGGGCCGACTCCTCCATCCCACATGGGCTCCTGTGCCTCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGTGCCCCGTCGAAGCATaGGCAGCCTTGGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGCPVEA*AALALA
Trigger: GGCCAGGGCCAAGGCTGCCCATGCTTCGACGGGGCA...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332324.5
ENST00000645871.1
CDS-3UTR CCA 90 bp GGCCTCCTGGGGGAAGACGGATGCTTGCAGCTAGCTCCGTGCCTGCCCGACTCCCTCCCCGGCAGGTCCTaGGACAGCTGTCCACACAGC +
Preference number: 4 (lower is better)
Translates to: GLLGEDGCLQLAPCLPDSLPGRS*DSCPHS
Trigger: GCTGTGTGGACAGCTGTCCCAGGACCTGCCGGGGAG...GGAGTCGGGCAGGCACGGAGCTAGCTGCAAGCATCCGTCTTCCCCCAGGAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGCCCGCCCTGCTGCAGTaGAGCTGCTGCTCCCCGGCA +
Preference number: 4 (lower is better)
Translates to: AGAHFPQTQGRPLPKLKLPALLQ*SCCSPA
Trigger: TGCCGGGGAGCAGCAGCTCCACTGCAGCAGGGCGGG...CAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCCCCTGGTGCAGTCCTaGGACCCTGTGCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGPLVQS*DPVQGL
Trigger: GAGGCCCTGCACAGGGTCCCAGGACTGCACCAGGGG...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GGCCTCCTGGGGGAAGACGGATGCTTGCAGCTAGCTCCGTGCCTGCCCGACTCCTCCTCTGTCCCAGGGTaGTGCGGTGGGTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLLGEDGCLQLAPCLPDSSSVPG*CGGWCC
Trigger: GCAGCACCACCCACCGCACCACCCTGGGACAGAGGA...GGAGTCGGGCAGGCACGGAGCTAGCTGCAAGCATCCGTCTTCCCCCAGGAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCGAGCCATCATGCCCGTaGACGCCCAGAGGCGGAACA +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLEPSCP*TPRGGT
Trigger: TGTTCCGCCTCTGGGCGTTCACGGGCATGATGGCTC...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR TCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCCTCTGGCAGCGGGTGTaGGGTGGCAGTGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLLWQRV*GGSEKP
Trigger: TGGCTTCTCACTGCCACCTCACACCCGCTGCCAGAG...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR TCA 90 bp GGCCAGAGTGCCGATTCCCGCACACCCAGCAGGAGTAGCACCAGGAGAGGACGCTGCTGTCGCCATCCCTaGGGGGTGCAGGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: GQSADSRTPSRSSTRRGRCCRHP*GVQDRA
Trigger: GGCTCTGTCCTGCACCCCTCAGGGATGGCGACAGCA...GCGTCCTCTCCTGGTGCTACTCCTGCTGGGTGTGCGGGAATCGGCACTCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp GGGATCAGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCACGGTGGGTGCAAGTTaGCCATCCTGCACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: GIRGAPTSWRAAESHQPTTVGAS*PSCTEG
Trigger: GCCCTCAGTGCAGGATGGTCAACTTGCACCCACCGT...GGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCTGATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGGCCAGGTTGGCCACGTaGAGCAGCAGTCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: AGAHFPQTQGRPLPKLKLARLAT*SSSPAC
Trigger: GCAGGCGGGACTGCTGCTGCACGTGGCCAACCTGGC...CAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCGGGACCAGAGGAGGATaGTGTGCAGCCAGGCCCATC +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLGTRGG*CAARPI
Trigger: GATGGGCCTGGCTGCACAGCATCCTCCTCTGGTCCC...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR GCA 90 bp GATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACCTGCAGTGGAGCTGCTaGTCCCCGGCAGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: DAGRAHCLSARASTLCRHLQWSC*SPAGPG
Trigger: CCCAGGACCTGCCGGGGAGCAGCAGCTCCACTGCAG...GTGCCTACACAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GGCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGGGAATGGGGGCGTCTaGCTGGCCTTGCACTCCCCC +
Preference number: 4 (lower is better)
Translates to: GWSPLPANPGPTSSQAEAGNGGV*LALHSP
Trigger: GGGGGAGTGCAAGGCCAGGCAGACGCCCCCATTCCC...AGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp AGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCTGGCTGCTGGGGGAAGACGGATaGTTGCAGCTAGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: RGAPTSWRAAESHQPTWLLGEDG*LQLAPC
Trigger: GCACGGAGCTAGCTGCAAGCATCCGTCTTCCCCCAG...CAGCCAGGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp AGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCTGGCTGGAATGGTGGCCAGGTTaGCCACGTGCAGCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: RGAPTSWRAAESHQPTWLEWWPG*PRAAAV
Trigger: GACTGCTGCTGCACGTGGCCAACCTGGCCACCATTC...CAGCCAGGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCGCAGAGAGGCCTCCCTaGGACCAGAGGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLAERPP*DQRRML
Trigger: CAGCATCCTCCTCTGGTCCCAGGGAGGCCTCTCTGC...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCGGGACCATCCACTGCTaGATCAGCCCCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLGTIHC*ISPTWS
Trigger: GCTCCAGGTGGGGCTGATCCAGCAGTGGATGGTCCC...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp TGCAGGGCTGCGCTGTCTGCACTGCCCAGCCTGGTGCCAGAAGAGCAGAGGGCACTCCCCGGCAGGTCCTaGGACAGCTGTCCACACAGC +
Preference number: 4 (lower is better)
Translates to: CRAALSALPSLVPEEQRALPGRS*DSCPHS
Trigger: GCTGTGTGGACAGCTGTCCCAGGACCTGCCGGGGAG...TGCCCTCTGCTCTTCTGGCACCAGGCTGGGCAGTGCAGACAGCGCAGCCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GACACCCTCGGACCCGGGGCAGGGTCAGCAAGACTCCCAGCTGGCATCAGACTGTGGACTGCCCATCCCTaGGCCATCCTGGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: DTLGPGAGSARLPAGIRLWTAHP*AILAGA
Trigger: GGCTCCAGCCAGGATGGCCCAGGGATGGGCAGTCCA...CAGTCTGATGCCAGCTGGGAGTCTTGCTGACCCTGCCCCGGGTCCGAGGGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GGGAGAGGCACAGGAGCCCATGTGGGATGGAGGAGTCGGCCCCACACCCATCCCAGCCACCAGCCCACCTaGCTGCCCAGGTTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: GRGTGAHVGWRSRPHTHPSHQPT*LPRFQV
Trigger: CACTTGGAACCTGGGCAGCCAGGTGGGCTGGTGGCT...GGGATGGGTGTGGGGCCGACTCCTCCATCCCACATGGGCTCCTGTGCCTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CGGACAGGTGATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGAGGGCAAGGCAGGCCTaGGGATCAGGGGTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: RTGDAGRAHCLSARASTLRARQA*GSGVPQ
Trigger: TTGGGGCACCCCTGATCCCCAGGCCTGCCTTGCCCT...CAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATCACCTGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGAGGGCAAGGCAGGCCTaGGGATCAGGGGTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGRARQA*GSGVPQ
Trigger: TTGGGGCACCCCTGATCCCCAGGCCTGCCTTGCCCT...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GGGCGCCTCACCTTGGCCCTGGGGGTCTCTGGTTGTCACAGGACCACCAGGAACGCACAGGAGCCCATGTaGGATGGAGGAGTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: GRLTLALGVSGCHRTTRNAQEPM*DGGVGP
Trigger: GGGGCCGACTCCTCCATCCCACATGGGCTCCTGTGC...GTTCCTGGTGGTCCTGTGACAACCAGAGACCCCCAGGGCCAAGGTGAGGCGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CTCCCCGGCAGGTCCTGGGACAGCTGTCCACACAGCTCTGGCACTCGCCCTTGTGAAGGGGGCCTGCGCTaGGCAGTGGAGCAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LPGRSWDSCPHSSGTRPCEGGLR*AVEQAL
Trigger: CAAAGCCTGCTCCACTGCCCAGCGCAGGCCCCCTTC...ACAAGGGCGAGTGCCAGAGCTGTGTGGACAGCTGTCCCAGGACCTGCCGGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GACACCCTCGGACCCGGGGCAGGGTCAGCAAGACTCCCAGCTGGCATCAGACTGGTGGGCGCCTCACCTTaGCCCTGGGGGTCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: DTLGPGAGSARLPAGIRLVGASP*PWGSLV
Trigger: AACCAGAGACCCCCAGGGCCAAGGTGAGGCGCCCAC...CAGTCTGATGCCAGCTGGGAGTCTTGCTGACCCTGCCCCGGGTCCGAGGGTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGGAGCCATCATGCCCGTaGACGCCCAGAGGCGGAACA +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGEPSCP*TPRGGT
Trigger: TGTTCCGCCTCTGGGCGTTCACGGGCATGATGGCTC...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR TCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCCAGGCCAGTGGGATCTaGGCCATCATGCCCGTGAAC +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLQASGI*AIMPVN
Trigger: GTTCACGGGCATGATGGCTCAGATCCCACTGGCCTG...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR TCA 90 bp GGGCGCCTCACCTTGGCCCTGGGGGTCTCTGGTTGTCACAGGACCACCAGGAACCTCTGGCAGCGGGTGTaGGGTGGCAGTGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: GRLTLALGVSGCHRTTRNLWQRV*GGSEKP
Trigger: TGGCTTCTCACTGCCACCTCACACCCGCTGCCAGAG...GTTCCTGGTGGTCCTGTGACAACCAGAGACCCCCAGGGCCAAGGTGAGGCGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp GCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGTGCTGTCGCCATCCCTaGGGGGTGCAGGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: AGAHFPQTQGRPLPKLKLCCRHP*GVQDRA
Trigger: GGCTCTGTCCTGCACCCCTCAGGGATGGCGACAGCA...CAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCACGGTGGGTGCAAGTTaGCCATCCTGCACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLTVGAS*PSCTEG
Trigger: GCCCTCAGTGCAGGATGGTCAACTTGCACCCACCGT...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp TGCAGGGCTGCGCTGTCTGCACTGCCCAGCCTGGTGCCAGAAGAGCAGAGGGCAGGGAACAAGGTGTCCTaGAGGCTGCAGGGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: CRAALSALPSLVPEEQRAGNKVS*RLQGCA
Trigger: AGCGCAGCCCTGCAGCCTTCAGGACACCTTGTTCCC...TGCCCTCTGCTCTTCTGGCACCAGGCTGGGCAGTGCAGACAGCGCAGCCCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp GGGCGCCTCACCTTGGCCCTGGGGGTCTCTGGTTGTCACAGGACCACCAGGAACGGGAACAAGGTGTCCTaGAGGCTGCAGGGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: GRLTLALGVSGCHRTTRNGNKVS*RLQGCA
Trigger: AGCGCAGCCCTGCAGCCTTCAGGACACCTTGTTCCC...GTTCCTGGTGGTCCTGTGACAACCAGAGACCCCCAGGGCCAAGGTGAGGCGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCCTCAAGGACAACGGCTaGGTTGCTCCGGAGCCGCTA +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLLKDNG*VAPEPL
Trigger: TAGCGGCTCCGGAGCAACGCAGCCGTTGTCCTTGAG...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR GCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCCCATCCACTTGCTGCTaGCCCGTCGAAGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLPSTCC*PVEAWA
Trigger: TGCCCATGCTTCGACGGGGCAGCAGCAAGTGGATGG...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332324.5
ENST00000645871.1
CDS-3UTR GCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCTGGCCATCCACTTGCTaGTGCCCCGTCGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLWPSTC*CPVEAW
Trigger: CCATGCTTCGACGGGGCAGCAGCAAGTGGATGGCCA...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR GCA 90 bp GGCCTCCTGGGGGAAGACGGATGCTTGCAGCTAGCTCCGTGCCTGCCCGACTCCTCCTGGCCATCCACTTaGTGCTGCCCCGTCGAAGCA +
Preference number: 4 (lower is better)
Translates to: GLLGEDGCLQLAPCLPDSSWPST*CCPVEA
Trigger: TGCTTCGACGGGGCAGCAGCAAGTGGATGGCCAGGA...GGAGTCGGGCAGGCACGGAGCTAGCTGCAAGCATCCGTCTTCCCCCAGGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCTGCAGCTCAGGCCTCTaGCGCTGGGGCCTCATAGTT +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLCSSGL*RWGLIV
Trigger: AACTATGAGGCCCCAGCGGCAGAGGCCTGAGCTGCA...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR GCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGGGGACCAGAGGAGGATaGTGTGCAGCCAGGCCCATC +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGGTRGG*CAARPI
Trigger: GATGGGCCTGGCTGCACAGCATCCTCCTCTGGTCCC...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR GCA 90 bp CCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACTCCCCCTACCGGCCATaGCCGCCCTGCTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: PCVGTGNGSLSRSFRVLHSPYRP*PPCCSG
Trigger: TCCACTGCAGCAGGGCGGGCATGGCCGGTAGGGGGA...GTGGAGAACCCTAAAGCTACGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CTCCCCGGCAGGTCCTGGGACAGCTGTCCACACAGCTCTGGCACTCGCCCTTGTCTGCGCTGTCTGCACTaGCCAGCCTGGTGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LPGRSWDSCPHSSGTRPCLRCLH*PAWCQK
Trigger: CTTCTGGCACCAGGCTGGGCAGTGCAGACAGCGCAG...ACAAGGGCGAGTGCCAGAGCTGTGTGGACAGCTGTCCCAGGACCTGCCGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GGGATCAGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCGGCACACTGTCTTTCTaGCAGAGCCAGCACCCTGTG +
Preference number: 4 (lower is better)
Translates to: GIRGAPTSWRAAESHQPTGTLSF*QSQHPV
Trigger: CACAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCC...GGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCTGATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CGGACAGGTGATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGTTGCAGCTAGCTCCGTaGCTGCCCGACTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RTGDAGRAHCLSARASTLLQLAP*LPDSPG
Trigger: TCCTGGGGAGTCGGGCAGGCACGGAGCTAGCTGCAA...CAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATCACCTGTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCCTGGGGGAAGACGGATaGTTGCAGCTAGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLLGEDG*LQLAPC
Trigger: GCACGGAGCTAGCTGCAAGCATCCGTCTTCCCCCAG...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCGAATCCTGCAGGCGATaGCACCTCAGCTCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLESCRR*HLSSQW
Trigger: CCACTGGGAGCTGAGGTGCCATCGCCTGCAGGATTC...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCCGCAATAACCAGGCATaGGGCGGGCCAGCTATAGGG +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLRNNQA*GGPAIG
Trigger: CCCTATAGCTGGCCCGCCCCATGCCTGGTTATTGCG...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp GGCCTCCTGGGGGAAGACGGATGCTTGCAGCTAGCTCCGTGCCTGCCCGACTCCCGCAATAACCAGGCATaGGGCGGGCCAGCTATAGGG +
Preference number: 4 (lower is better)
Translates to: GLLGEDGCLQLAPCLPDSRNNQA*GGPAIG
Trigger: CCCTATAGCTGGCCCGCCCCATGCCTGGTTATTGCG...GGAGTCGGGCAGGCACGGAGCTAGCTGCAAGCATCCGTCTTCCCCCAGGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GGGAGAGGCACAGGAGCCCATGTGGGATGGAGGAGTCGGCCCCACACCCATCCCGGAACACCCCTGTCCTaGCCATCCACTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GRGTGAHVGWRSRPHTHPGTPLS*PSTCCC
Trigger: GCAGCAGCAAGTGGATGGCCAGGACAGGGGTGTTCC...GGGATGGGTGTGGGGCCGACTCCTCCATCCCACATGGGCTCCTGTGCCTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCTCAGGCCTCTGCCGCTaGGGCCTCATAGTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLSGLCR*GLIVEH
Trigger: GTGCTCAACTATGAGGCCCCAGCGGCAGAGGCCTGA...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp CGGACAGGTGATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGGGGCAGCAGCACTGCTaGCCTTCTTCCCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RTGDAGRAHCLSARASTLGQQHC*PSSLQR
Trigger: CCTCTGCAGGGAAGAAGGCCAGCAGTGCTGCTGCCC...CAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATCACCTGTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CTCCCCGGCAGGTCCTGGGACAGCTGTCCACACAGCTCTGGCACTCGCCCTTGTGGGACCATCCACTGCTaGATCAGCCCCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LPGRSWDSCPHSSGTRPCGTIHC*ISPTWS
Trigger: GCTCCAGGTGGGGCTGATCCAGCAGTGGATGGTCCC...ACAAGGGCGAGTGCCAGAGCTGTGTGGACAGCTGTCCCAGGACCTGCCGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GGCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTCAGGCCCCAGGCCCCTaGCAGGCTGAAGAGGTCACT +
Preference number: 4 (lower is better)
Translates to: GWSPLPANPGPTSSQAEAQAPGP*QAEEVT
Trigger: AGTGACCTCTTCAGCCTGCCAGGGGCCTGGGGCCTG...AGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACCAGGCCCCAGGCCCCTaGCAGGCTGAAGAGGTCACT +
Preference number: 4 (lower is better)
Translates to: DAGRAHCLSARASTLCRHQAPGP*QAEEVT
Trigger: AGTGACCTCTTCAGCCTGCCAGGGGCCTGGGGCCTG...GTGCCTACACAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GGGAGAGGCACAGGAGCCCATGTGGGATGGAGGAGTCGGCCCCACACCCATCCCCTGTCCACACAGCTCTaGCACTCGCCCTTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GRGTGAHVGWRSRPHTHPLSTQL*HSPLWV
Trigger: CACCCACAAGGGCGAGTGCCAGAGCTGTGTGGACAG...GGGATGGGTGTGGGGCCGACTCCTCCATCCCACATGGGCTCCTGTGCCTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCCTGTCCACACAGCTCTaGCACTCGCCCTTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLLSTQL*HSPLWV
Trigger: CACCCACAAGGGCGAGTGCCAGAGCTGTGTGGACAG...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GACACCCTCGGACCCGGGGCAGGGTCAGCAAGACTCCCAGCTGGCATCAGACTGCTAGGTAGGGGAGTGTaGGGAATGGGGGCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: DTLGPGAGSARLPAGIRLLGRGV*GMGASA
Trigger: GGCAGACGCCCCCATTCCCCACACTCCCCTACCTAG...CAGTCTGATGCCAGCTGGGAGTCTTGCTGACCCTGCCCCGGGTCCGAGGGTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GACACCCTCGGACCCGGGGCAGGGTCAGCAAGACTCCCAGCTGGCATCAGACTGACCAGAAAGGCCCTGTaGACTGCCCATCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: DTLGPGAGSARLPAGIRLTRKAL*TAHPWA
Trigger: GGCCCAGGGATGGGCAGTCCACAGGGCCTTTCTGGT...CAGTCTGATGCCAGCTGGGAGTCTTGCTGACCCTGCCCCGGGTCCGAGGGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCGGGGACACCAGGGCCTaGTCCAGTCTTGGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLGDTRA*SSLGVF
Trigger: AAAGACCCCAAGACTGGACCAGGCCCTGGTGTCCCC...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp TGCAGGGCTGCGCTGTCTGCACTGCCCAGCCTGGTGCCAGAAGAGCAGAGGGCACCCACCAGCCCCCACTaGGGTAGAGGGAGGATACCA +
Preference number: 4 (lower is better)
Translates to: CRAALSALPSLVPEEQRAPTSPH*GRGRIP
Trigger: TGGTATCCTCCCTCTACCCCAGTGGGGGCTGGTGGG...TGCCCTCTGCTCTTCTGGCACCAGGCTGGGCAGTGCAGACAGCGCAGCCCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCTGCGGCACCATGAGTTaGCGTCGCGGTAGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLCGTMS*RRGRRR
Trigger: TCTTCTCCTACCGCGACGTCAACTCATGGTGCCGCA...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR TCA 90 bp GGCCTCCTGGGGGAAGACGGATGCTTGCAGCTAGCTCCGTGCCTGCCCGACTCCTGCGGCACCATGAGTTaGCGTCGCGGTAGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: GLLGEDGCLQLAPCLPDSCGTMS*RRGRRR
Trigger: TCTTCTCCTACCGCGACGTCAACTCATGGTGCCGCA...GGAGTCGGGCAGGCACGGAGCTAGCTGCAAGCATCCGTCTTCCCCCAGGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp GGGAGAGGCACAGGAGCCCATGTGGGATGGAGGAGTCGGCCCCACACCCATCCCTGCGGCACCATGAGTTaGCGTCGCGGTAGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: GRGTGAHVGWRSRPHTHPCGTMS*RRGRRR
Trigger: TCTTCTCCTACCGCGACGTCAACTCATGGTGCCGCA...GGGATGGGTGTGGGGCCGACTCCTCCATCCCACATGGGCTCCTGTGCCTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp GGCCAGAGTGCCGATTCCCGCACACCCAGCAGGAGTAGCACCAGGAGAGGACGCCAGGCCAGTGGGATCTaGGCCATCATGCCCGTGAAC +
Preference number: 4 (lower is better)
Translates to: GQSADSRTPSRSSTRRGRQASGI*AIMPVN
Trigger: GTTCACGGGCATGATGGCTCAGATCCCACTGGCCTG...GCGTCCTCTCCTGGTGCTACTCCTGCTGGGTGTGCGGGAATCGGCACTCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp GGGCGCCTCACCTTGGCCCTGGGGGTCTCTGGTTGTCACAGGACCACCAGGAACCAGGCCAGTGGGATCTaGGCCATCATGCCCGTGAAC +
Preference number: 4 (lower is better)
Translates to: GRLTLALGVSGCHRTTRNQASGI*AIMPVN
Trigger: GTTCACGGGCATGATGGCTCAGATCCCACTGGCCTG...GTTCCTGGTGGTCCTGTGACAACCAGAGACCCCCAGGGCCAAGGTGAGGCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp GATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACCTCTGGCAGCGGGTGTaGGGTGGCAGTGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: DAGRAHCLSARASTLCRHLWQRV*GGSEKP
Trigger: TGGCTTCTCACTGCCACCTCACACCCGCTGCCAGAG...GTGCCTACACAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCATGAGCCAGATGAGGTaGTTGGGGACCGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLMSQMR*LGTASF
Trigger: GAAGCTGGCGGTCCCCAATCACCTCATCTGGCTCAT...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp GACACCCTCGGACCCGGGGCAGGGTCAGCAAGACTCCCAGCTGGCATCAGACTGTGGACAGCACTTTATTaGCACCCTCGGACCCGGGGC +
Preference number: 4 (lower is better)
Translates to: DTLGPGAGSARLPAGIRLWTALY*HPRTRG
Trigger: GCCCCGGGTCCGAGGGTGTCAATAAAGTGCTGTCCA...CAGTCTGATGCCAGCTGGGAGTCTTGCTGACCCTGCCCCGGGTCCGAGGGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGAGGAAGAGGATGGTGTaGGCCATCAGCGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGRKRMV*AISASR
Trigger: CCTGCTGGCGCTGATGGCGCACACCATCCTCTTCCT...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR GCA 90 bp TGCAGGGCTGCGCTGTCTGCACTGCCCAGCCTGGTGCCAGAAGAGCAGAGGGCAAGGAAGAGGATGGTGTaGGCCATCAGCGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CRAALSALPSLVPEEQRARKRMV*AISASR
Trigger: CCTGCTGGCGCTGATGGCGCACACCATCCTCTTCCT...TGCCCTCTGCTCTTCTGGCACCAGGCTGGGCAGTGCAGACAGCGCAGCCCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGAGGAAGAGGATGGTGTaGGCCATCAGCGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LSARASTLCRHGEREPVPRKRMV*AISASR
Trigger: CCTGCTGGCGCTGATGGCGCACACCATCCTCTTCCT...CGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGGTGCTGGCTCTGGCAGAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCCATCCACTTGCTGCTaGCCCGTCGAAGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGPSTCC*PVEAWA
Trigger: TGCCCATGCTTCGACGGGGCAGCAGCAAGTGGATGG...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332324.5
ENST00000645871.1
CDS-3UTR GCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGTGGCCATCCACTTGCTaGTGCCCCGTCGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGWPSTC*CPVEAW
Trigger: CCATGCTTCGACGGGGCAGCAGCAAGTGGATGGCCA...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR GCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGTCCTGGCCATCCACTTaGTGCTGCCCCGTCGAAGCA +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGSWPST*CCPVEA
Trigger: TGCTTCGACGGGGCAGCAGCAAGTGGATGGCCAGGA...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR GCA 90 bp CTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGTGCAGCTCAGGCCTCTaGCGCTGGGGCCTCATAGTT +
Preference number: 4 (lower is better)
Translates to: LSARASTLCRHGEREPVPCSSGL*RWGLIV
Trigger: AACTATGAGGCCCCAGCGGCAGAGGCCTGAGCTGCA...CGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGGTGCTGGCTCTGGCAGAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGTGCAGCTCAGGCCTCTaGCGCTGGGGCCTCATAGTT +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGCSSGL*RWGLIV
Trigger: AACTATGAGGCCCCAGCGGCAGAGGCCTGAGCTGCA...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR GCA 90 bp GACACCCTCGGACCCGGGGCAGGGTCAGCAAGACTCCCAGCTGGCATCAGACTGGAAAGCGCTTCCGGATaGGGGGAGAGCGGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: DTLGPGAGSARLPAGIRLESASG*GESGES
Trigger: ACTTTCCCCGCTCTCCCCGCATCCGGAAGCGCTTTC...CAGTCTGATGCCAGCTGGGAGTCTTGCTGACCCTGCCCCGGGTCCGAGGGTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CTCCCCGGCAGGTCCTGGGACAGCTGTCCACACAGCTCTGGCACTCGCCCTTGTCCATCCACTTGCTGCTaGCCCGTCGAAGCATGGGCT +
Preference number: 4 (lower is better)
Translates to: LPGRSWDSCPHSSGTRPCPSTCC*PVEAWA
Trigger: AGCCCATGCTTCGACGGGGCAGCAGCAAGTGGATGG...ACAAGGGCGAGTGCCAGAGCTGTGTGGACAGCTGTCCCAGGACCTGCCGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACCTGCTGCAGTGGAGCTaGTGCTCCCCGGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: PCVGTGNGSLSRSFRVLHLLQWS*CSPAGP
Trigger: AGGACCTGCCGGGGAGCAGCAGCTCCACTGCAGCAG...GTGGAGAACCCTAAAGCTACGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CTTCCCAAGGTGTTCGCACTCGGACAGGTGATGCGGGGCGGGCACACTGTCTTTCGGCCATGCCCGCCCTaGTGCAGTGGAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LPKVFALGQVMRGGHTVFRPCPP*CSGAAA
Trigger: AGCAGCAGCTCCACTGCAGCAGGGCGGGCATGGCCG...AAAGACAGTGTGCCCGCCCCGCATCACCTGTCCGAGTGCGAACACCTTGGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CTTCCCAAGGTGTTCGCACTCGGACAGGTGATGCGGGGCGGGCACACTGTCTTTTCCCCCTACCGGCCATaGCCGCCCTGCTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: LPKVFALGQVMRGGHTVFSPYRP*PPCCSG
Trigger: TCCACTGCAGCAGGGCGGGCATGGCCGGTAGGGGGA...AAAGACAGTGTGCCCGCCCCGCATCACCTGTCCGAGTGCGAACACCTTGGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp TGCAGGGCTGCGCTGTCTGCACTGCCCAGCCTGGTGCCAGAAGAGCAGAGGGCAAAAGGCCCTGTGGACTaGCCATCCCTGGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: CRAALSALPSLVPEEQRAKGPVD*PSLGHP
Trigger: AGGATGGCCCAGGGATGGGCAGTCCACAGGGCCTTT...TGCCCTCTGCTCTTCTGGCACCAGGCTGGGCAGTGCAGACAGCGCAGCCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GGCCAGAGTGCCGATTCCCGCACACCCAGCAGGAGTAGCACCAGGAGAGGACGCAAAGGCCCTGTGGACTaGCCATCCCTGGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: GQSADSRTPSRSSTRRGRKGPVD*PSLGHP
Trigger: AGGATGGCCCAGGGATGGGCAGTCCACAGGGCCTTT...GCGTCCTCTCCTGGTGCTACTCCTGCTGGGTGTGCGGGAATCGGCACTCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGGTGAAGGAAAGAGGCTaGCAAACCGAGCCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LSARASTLCRHGEREPVPVKERG*QTEPCP
Trigger: GGGGCAGGGCTCGGTTTGGCAGCCTCTTTCCTTCAC...CGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGGTGCTGGCTCTGGCAGAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACCTGCGCTGTCTGCACTaGCCAGCCTGGTGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: DAGRAHCLSARASTLCRHLRCLH*PAWCQK
Trigger: CTTCTGGCACCAGGCTGGGCAGTGCAGACAGCGCAG...GTGCCTACACAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CTCCCCGGCAGGTCCTGGGACAGCTGTCCACACAGCTCTGGCACTCGCCCTTGTGAGCTCACCCACTACTaGCATCCTCAGCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LPGRSWDSCPHSSGTRPCELTHY*HPQQGP
Trigger: TGGGCCCTGCTGAGGATGGCAGTAGTGGGTGAGCTC...ACAAGGGCGAGTGCCAGAGCTGTGTGGACAGCTGTCCCAGGACCTGCCGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp AGGGAGGATACCACCAAGGGAGCCCACCCTCCCCTCACACCACCAGTTCAGCAGTGCGGTGGGTGGTGCTaGAATGAGGAGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: REDTTKGAHPPLTPPVQQCGGWC*NEEGPR
Trigger: CCTGGGCCCCTCCTCATTGCAGCACCACCCACCGCA...CTGCTGAACTGGTGGTGTGAGGGGAGGGTGGGCTCCCTTGGTGGTATCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GGCGCCTCACCTTGGCCCTGGGGGTCTCTGGTTGTCACAGGACCACCAGGAACCGAATCCTGCAGGCGATaGCACCTCAGCTCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: GASPWPWGSLVVTGPPGTESCRR*HLSSQW
Trigger: CCACTGGGAGCTGAGGTGCCATCGCCTGCAGGATTC...GGTTCCTGGTGGTCCTGTGACAACCAGAGACCCCCAGGGCCAAGGTGAGGCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGGAATGGTGGCCAGGTTaGCCACGTGCAGCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGEWWPG*PRAAAV
Trigger: GACTGCTGCTGCACGTGGCCAACCTGGCCACCATTC...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp GACACCCTCGGACCCGGGGCAGGGTCAGCAAGACTCCCAGCTGGCATCAGACTGGAATGGTGGCCAGGTTaGCCACGTGCAGCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: DTLGPGAGSARLPAGIRLEWWPG*PRAAAV
Trigger: GACTGCTGCTGCACGTGGCCAACCTGGCCACCATTC...CAGTCTGATGCCAGCTGGGAGTCTTGCTGACCCTGCCCCGGGTCCGAGGGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp AGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCTGGCTGCAGCAGGGAGCCCACTaGAGTGATAGACTCAACCAG +
Preference number: 4 (lower is better)
Translates to: RGAPTSWRAAESHQPTWLQQGAH*SDRLNQ
Trigger: CTGGTTGAGTCTATCACTCCAGTGGGCTCCCTGCTG...CAGCCAGGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGGGAACACCCCTGTCCTaGCCATCCACTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGGTPLS*PSTCCC
Trigger: GCAGCAGCAAGTGGATGGCCAGGACAGGGGTGTTCC...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCACCAGGTACTCGTaGAAGAAGGCCGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGLTRYS*KKAEAR
Trigger: CCTGGCCTCGGCCTTCTTCCACGAGTACCTGGTGAG...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp CTCCCCGGCAGGTCCTGGGACAGCTGTCCACACAGCTCTGGCACTCGCCCTTGTCTCACCAGGTACTCGTaGAAGAAGGCCGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPGRSWDSCPHSSGTRPCLTRYS*KKAEAR
Trigger: CCTGGCCTCGGCCTTCTTCCACGAGTACCTGGTGAG...ACAAGGGCGAGTGCCAGAGCTGTGTGGACAGCTGTCCCAGGACCTGCCGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCCACGAACCAGGCCAGTaGGATCTGAGCCATCATGCC +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLHEPGQ*DLSHHA
Trigger: GGCATGATGGCTCAGATCCCACTGGCCTGGTTCGTG...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp GGCGCCTCACCTTGGCCCTGGGGGTCTCTGGTTGTCACAGGACCACCAGGAACCTCAGGCCTCTGCCGCTaGGGCCTCATAGTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: GASPWPWGSLVVTGPPGTSGLCR*GLIVEH
Trigger: GTGCTCAACTATGAGGCCCCAGCGGCAGAGGCCTGA...GGTTCCTGGTGGTCCTGTGACAACCAGAGACCCCCAGGGCCAAGGTGAGGCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCGCATCAGACTGTGTCTaGCCTGCTGTCGCCATCCCT +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLASDCV*PAVAIP
Trigger: AGGGATGGCGACAGCAGGCCAGACACAGTCTGATGC...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp GGGATCAGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCAGCAAGACTCCCAGCTaGCATCAGACTGTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GIRGAPTSWRAAESHQPTSKTPS*HQTVSG
Trigger: GCCAGACACAGTCTGATGCCAGCTGGGAGTCTTGCT...GGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCTGATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GGGATCAGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCGCTCGTAGCACAAGGTaGGGGCGAAGAGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: GIRGAPTSWRAAESHQPTARSTR*GRRGSS
Trigger: ACTACTTCCTCTTCGCCCCCACCTTGTGCTACGAGC...GGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCTGATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GGCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTCTGCACTGCCCAGCCTaGTGCCAGAAGAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GWSPLPANPGPTSSQAEALHCPA*CQKSRG
Trigger: CCCTCTGCTCTTCTGGCACCAGGCTGGGCAGTGCAG...AGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGCCCACCAGCCCCCACTaGGGTAGAGGGAGGATACCA +
Preference number: 4 (lower is better)
Translates to: AGAHFPQTQGRPLPKLKLPTSPH*GRGRIP
Trigger: TGGTATCCTCCCTCTACCCCAGTGGGGGCTGGTGGG...CAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp AGGGAGGATACCACCAAGGGAGCCCACCCTCCCCTCACACCACCAGTTCAGCAGTCCTCTGTCCCAGGGTaGTGCGGTGGGTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: REDTTKGAHPPLTPPVQQSSVPG*CGGWCC
Trigger: GCAGCACCACCCACCGCACCACCCTGGGACAGAGGA...CTGCTGAACTGGTGGTGTGAGGGGAGGGTGGGCTCCCTTGGTGGTATCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCGGTAGGAGAAGAGCTTaGGGAAGAGGATGGTGTGCG +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLGRRRA*GRGWCA
Trigger: CGCACACCATCCTCTTCCTCAAGCTCTTCTCCTACC...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR TCA 90 bp AGGGAGGATACCACCAAGGGAGCCCACCCTCCCCTCACACCACCAGTTCAGCAGGAGCCATCATGCCCGTaGACGCCCAGAGGCGGAACA +
Preference number: 4 (lower is better)
Translates to: REDTTKGAHPPLTPPVQQEPSCP*TPRGGT
Trigger: TGTTCCGCCTCTGGGCGTTCACGGGCATGATGGCTC...CTGCTGAACTGGTGGTGTGAGGGGAGGGTGGGCTCCCTTGGTGGTATCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCCTGGGGCCTCATAGTTaGGCACGTAGTAGTCGTGGA +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLLGPHS*ARSSRG
Trigger: TCCACGACTACTACGTGCTCAACTATGAGGCCCCAG...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR TCA 90 bp GGGAGAGGCACAGGAGCCCATGTGGGATGGAGGAGTCGGCCCCACACCCATCCCCCACCTGGAGCTGGGTaGAGAACAGCATCTCAAGGA +
Preference number: 4 (lower is better)
Translates to: GRGTGAHVGWRSRPHTHPPPGAG*RTASQG
Trigger: TCCTTGAGATGCTGTTCTTCACCCAGCTCCAGGTGG...GGGATGGGTGTGGGGCCGACTCCTCCATCCCACATGGGCTCCTGTGCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp GGGAGAGGCACAGGAGCCCATGTGGGATGGAGGAGTCGGCCCCACACCCATCCCTCAGGAGGCGCTCGATaGTGCGTGAGTAGTCCATGT +
Preference number: 4 (lower is better)
Translates to: GRGTGAHVGWRSRPHTHPSGGAR*CVSSPC
Trigger: ACATGGACTACTCACGCATCATCGAGCGCCTCCTGA...GGGATGGGTGTGGGGCCGACTCCTCCATCCCACATGGGCTCCTGTGCCTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp CGGACAGGTGATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGATGAGCCAGATGAGGTaGTTGGGGACCGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RTGDAGRAHCLSARASTLMSQMR*LGTASF
Trigger: GAAGCTGGCGGTCCCCAATCACCTCATCTGGCTCAT...CAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATCACCTGTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp GGCCTCCTGGGGGAAGACGGATGCTTGCAGCTAGCTCCGTGCCTGCCCGACTCCTCTGCCAGAAGTAGGTaGCAGACTCGGAGTTCCACC +
Preference number: 4 (lower is better)
Translates to: GLLGEDGCLQLAPCLPDSSARSR*QTRSST
Trigger: GGTGGAACTCCGAGTCTGTCACCTACTTCTGGCAGA...GGAGTCGGGCAGGCACGGAGCTAGCTGCAAGCATCCGTCTTCCCCCAGGAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp GGCGCCTCACCTTGGCCCTGGGGGTCTCTGGTTGTCACAGGACCACCAGGAACCTTGACCATCCTGCACTaGGGGCCAGAGTGCCGATTC +
Preference number: 4 (lower is better)
Translates to: GASPWPWGSLVVTGPPGTLTILH*GPECRF
Trigger: GAATCGGCACTCTGGCCCTCAGTGCAGGATGGTCAA...GGTTCCTGGTGGTCCTGTGACAACCAGAGACCCCCAGGGCCAAGGTGAGGCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp AGGGAGGATACCACCAAGGGAGCCCACCCTCCCCTCACACCACCAGTTCAGCAGCCCTGGGGTTACCCCTaGCCTCCCGCTACCATCAAG +
Preference number: 4 (lower is better)
Translates to: REDTTKGAHPPLTPPVQQPWGYP*PPATIK
Trigger: CTTGATGGTAGCGGGAGGTCAGGGGTAACCCCAGGG...CTGCTGAACTGGTGGTGTGAGGGGAGGGTGGGCTCCCTTGGTGGTATCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp CTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGCTTGCAGTTCTTTATTaGGGGACCAGGGGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: LSARASTLCRHGEREPVPLAVLY*GTRGGR
Trigger: GCGCCCACCCCTGGTCCCTCAATAAAGAACTGCAAG...CGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGGTGCTGGCTCTGGCAGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTTGCAGTTCTTTATTaGGGGACCAGGGGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGLAVLY*GTRGGR
Trigger: GCGCCCACCCCTGGTCCCTCAATAAAGAACTGCAAG...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCCTGCGTTGCCATAGTTaGCCTGGAAAAAGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLLRCHS*PGKSGP
Trigger: TGGGCCGCTTTTTCCAGGGCAACTATGGCAACGCAG...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR GCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCGACAGCCACACAGCTaGGTTGCCATAGTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGRQPHS*VAIVAL
Trigger: CAGGGCAACTATGGCAACGCAGCTGTGTGGCTGTCG...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR GCA 90 bp CTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGCGACAGCCACACAGCTaGGTTGCCATAGTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LSARASTLCRHGEREPVPRQPHS*VAIVAL
Trigger: CAGGGCAACTATGGCAACGCAGCTGTGTGGCTGTCG...CGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGGTGCTGGCTCTGGCAGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACGGGACCAGAGGAGGATaGTGTGCAGCCAGGCCCATC +
Preference number: 4 (lower is better)
Translates to: PCVGTGNGSLSRSFRVLHGTRGG*CAARPI
Trigger: GATGGGCCTGGCTGCACAGCATCCTCCTCTGGTCCC...GTGGAGAACCCTAAAGCTACGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp TGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGAGGGGACCAGAGGAGGATaGTGTGCAGCCAGGCCCATC +
Preference number: 4 (lower is better)
Translates to: WSPLPANPGPTSSQAEAEGTRGG*CAARPI
Trigger: GATGGGCCTGGCTGCACAGCATCCTCCTCTGGTCCC...CTCAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp TGCAGGGCTGCGCTGTCTGCACTGCCCAGCCTGGTGCCAGAAGAGCAGAGGGCATCCCGGTCTCCAAACTaGATGAGCTCAGCCACGGCA +
Preference number: 4 (lower is better)
Translates to: CRAALSALPSLVPEEQRASRSPN*MSSATA
Trigger: TGCCGTGGCTGAGCTCATGCAGTTTGGAGACCGGGA...TGCCCTCTGCTCTTCTGGCACCAGGCTGGGCAGTGCAGACAGCGCAGCCCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CGGACAGGTGATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGGCTGAGCACGGTGGGTaGAAGTTGACCATCCTGCAC +
Preference number: 4 (lower is better)
Translates to: RTGDAGRAHCLSARASTLAEHGG*KLTILH
Trigger: GTGCAGGATGGTCAACTTGCACCCACCGTGCTCAGC...CAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATCACCTGTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACGTGAAGGAAAGAGGCTaGCAAACCGAGCCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: DAGRAHCLSARASTLCRHVKERG*QTEPCP
Trigger: GGGGCAGGGCTCGGTTTGGCAGCCTCTTTCCTTCAC...GTGCCTACACAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACTCAGCCTGGTGGAGGAAGGGAACCTGGGGATCAGGGGTaGCCCAACCTCGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GACPVALGFSTQPGGGREPGDQG*PNLVEG
Trigger: GCCCTCCACGAGGTTGGGGCACCCCTGATCCCCAGG...TTCCCTTCCTCCACCAGGCTGAGTGGAGAACCCTAAAGCTACGGGACAGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACCAGGGCCCAAGGAGATaGCTCCATCTCAGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: PCVGTGNGSLSRSFRVLHQGPRR*LHLRAH
Trigger: GTGGGCCCTGAGATGGAGGCATCTCCTTGGGCCCTG...GTGGAGAACCCTAAAGCTACGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CTCCCCGGCAGGTCCTGGGACAGCTGTCCACACAGCTCTGGCACTCGCCCTTGTGGCACACTGTCTTTCTaGCAGAGCCAGCACCCTGTG +
Preference number: 4 (lower is better)
Translates to: LPGRSWDSCPHSSGTRPCGTLSF*QSQHPV
Trigger: CACAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCC...ACAAGGGCGAGTGCCAGAGCTGTGTGGACAGCTGTCCCAGGACCTGCCGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp AGGGAGGATACCACCAAGGGAGCCCACCCTCCCCTCACACCACCAGTTCAGCAGTTGCAGCTAGCTCCGTaGCTGCCCGACTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: REDTTKGAHPPLTPPVQQLQLAP*LPDSPG
Trigger: TCCTGGGGAGTCGGGCAGGCACGGAGCTAGCTGCAA...CTGCTGAACTGGTGGTGTGAGGGGAGGGTGGGCTCCCTTGGTGGTATCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GGCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTTCTGTCCCAGGGTGGTaGGGTGGGTGGTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: GWSPLPANPGPTSSQAEASVPGW*GGWCCN
Trigger: ATTGCAGCACCACCCACCGCACCACCCTGGGACAGA...AGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCGAGAAACCACCTGGATaGGGTCCACCAGGATGCCAT +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLEKPPG*GPPGCH
Trigger: ATGGCATCCTGGTGGACCCCATCCAGGTGGTTTCTC...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCGGAAACACAGAATGGTaGCCAGGTTGGCCACGTGCA +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLGNTEW*PGWPRA
Trigger: TGCACGTGGCCAACCTGGCCACCATTCTGTGTTTCC...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCCTGGGAAACACAGAATaGTGGCCAGGTTGGCCACGT +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLLGNTE*WPGWPR
Trigger: ACGTGGCCAACCTGGCCACCATTCTGTGTTTCCCAG...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCCAGCAGGGAGCCCACTaGAGTGATAGACTCAACCAG +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLQQGAH*SDRLNQ
Trigger: CTGGTTGAGTCTATCACTCCAGTGGGCTCCCTGCTG...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCACGAACCAGGCCAGTaGGATCTGAGCCATCATGCC +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGHEPGQ*DLSHHA
Trigger: GGCATGATGGCTCAGATCCCACTGGCCTGGTTCGTG...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp CTCCCCGGCAGGTCCTGGGACAGCTGTCCACACAGCTCTGGCACTCGCCCTTGTCACGAACCAGGCCAGTaGGATCTGAGCCATCATGCC +
Preference number: 4 (lower is better)
Translates to: LPGRSWDSCPHSSGTRPCHEPGQ*DLSHHA
Trigger: GGCATGATGGCTCAGATCCCACTGGCCTGGTTCGTG...ACAAGGGCGAGTGCCAGAGCTGTGTGGACAGCTGTCCCAGGACCTGCCGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GGCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTTCAGGCCTCTGCCGCTaGGGCCTCATAGTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: GWSPLPANPGPTSSQAEASGLCR*GLIVEH
Trigger: GTGCTCAACTATGAGGCCCCAGCGGCAGAGGCCTGA...AGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACGCAGAGAGGCCTCCCTaGGACCAGAGGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: PCVGTGNGSLSRSFRVLHAERPP*DQRRML
Trigger: CAGCATCCTCCTCTGGTCCCAGGGAGGCCTCTCTGC...GTGGAGAACCCTAAAGCTACGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp AGGGAGGATACCACCAAGGGAGCCCACCCTCCCCTCACACCACCAGTTCAGCAGGCAGAGAGGCCTCCCTaGGACCAGAGGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: REDTTKGAHPPLTPPVQQAERPP*DQRRML
Trigger: CAGCATCCTCCTCTGGTCCCAGGGAGGCCTCTCTGC...CTGCTGAACTGGTGGTGTGAGGGGAGGGTGGGCTCCCTTGGTGGTATCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGGCATCAGACTGTGTCTaGCCTGCTGTCGCCATCCCT +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGASDCV*PAVAIP
Trigger: AGGGATGGCGACAGCAGGCCAGACACAGTCTGATGC...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCAGCAAGACTCCCAGCTaGCATCAGACTGTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLSKTPS*HQTVSG
Trigger: GCCAGACACAGTCTGATGCCAGCTGGGAGTCTTGCT...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp CGGACAGGTGATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGTGGATCAGCCCCACCTaGAGCTGGGTGAAGAACAGC +
Preference number: 4 (lower is better)
Translates to: RTGDAGRAHCLSARASTLWISPT*SWVKNS
Trigger: GCTGTTCTTCACCCAGCTCCAGGTGGGGCTGATCCA...CAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATCACCTGTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GGGATCAGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCTCATGGAGTTCTGGATaGTGGGGACCATCCACTGCT +
Preference number: 4 (lower is better)
Translates to: GIRGAPTSWRAAESHQPTSWSSG*WGPSTA
Trigger: AGCAGTGGATGGTCCCCACCATCCAGAACTCCATGA...GGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCTGATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACCTGGGCCATCCTGGCTaGAGCCCACTTCCCGCAAAC +
Preference number: 4 (lower is better)
Translates to: PCVGTGNGSLSRSFRVLHLGHPG*SPLPAN
Trigger: GTTTGCGGGAAGTGGGCTCCAGCCAGGATGGCCCAG...GTGGAGAACCCTAAAGCTACGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CTTCCCAAGGTGTTCGCACTCGGACAGGTGATGCGGGGCGGGCACACTGTCTTTATCCCTGGGCCATCCTaGCTGGAGCCCACTTCCCGC +
Preference number: 4 (lower is better)
Translates to: LPKVFALGQVMRGGHTVFIPGPS*LEPTSR
Trigger: GCGGGAAGTGGGCTCCAGCCAGGATGGCCCAGGGAT...AAAGACAGTGTGCCCGCCCCGCATCACCTGTCCGAGTGCGAACACCTTGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GGGATCAGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCAAACACCTGCCTTGTTaGGCCATAGCTGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GIRGAPTSWRAAESHQPTKHLPC*AIAAGL
Trigger: CAGACCTGCAGCTATGGCCCAACAAGGCAGGTGTTT...GGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCTGATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CTTCCCAAGGTGTTCGCACTCGGACAGGTGATGCGGGGCGGGCACACTGTCTTTGCACAGGAGCCCATGTaGGATGGAGGAGTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: LPKVFALGQVMRGGHTVFAQEPM*DGGVGP
Trigger: GGGGCCGACTCCTCCATCCCACATGGGCTCCTGTGC...AAAGACAGTGTGCCCGCCCCGCATCACCTGTCCGAGTGCGAACACCTTGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGGCCTCACCTTGGCCCTaGGGGTCTCTGGTTGTCACA +
Preference number: 4 (lower is better)
Translates to: AGAHFPQTQGRPLPKLKLASPWP*GSLVVT
Trigger: TGTGACAACCAGAGACCCCCAGGGCCAAGGTGAGGC...CAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGAGTCGTGGACGTACATaGGGACGGCTATTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGSRGRT*GRLLAV
Trigger: GACAGCCAATAGCCGTCCTCATGTACGTCCACGACT...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR TCA 90 bp CTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGAGTCGTGGACGTACATaGGGACGGCTATTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: LSARASTLCRHGEREPVPSRGRT*GRLLAV
Trigger: GACAGCCAATAGCCGTCCTCATGTACGTCCACGACT...CGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGGTGCTGGCTCTGGCAGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp CTCCCCGGCAGGTCCTGGGACAGCTGTCCACACAGCTCTGGCACTCGCCCTTGTCTGGGGCCTCATAGTTaGGCACGTAGTAGTCGTGGA +
Preference number: 4 (lower is better)
Translates to: LPGRSWDSCPHSSGTRPCLGPHS*ARSSRG
Trigger: TCCACGACTACTACGTGCTCAACTATGAGGCCCCAG...ACAAGGGCGAGTGCCAGAGCTGTGTGGACAGCTGTCCCAGGACCTGCCGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTGGGGCCTCATAGTTaGGCACGTAGTAGTCGTGGA +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGLGPHS*ARSSRG
Trigger: TCCACGACTACTACGTGCTCAACTATGAGGCCCCAG...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR TCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCCACCTGGAGCTGGGTaGAGAACAGCATCTCAAGGA +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGPPGAG*RTASQG
Trigger: TCCTTGAGATGCTGTTCTTCACCCAGCTCCAGGTGG...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GCCCCATCTATCCAGCTTGGTGGATTGCAGGGCCTGGGAACAAGGTGTCCTGAAGCCAGGTTGGCCACGTaGAGCAGCAGTCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: APSIQLGGLQGLGTRCPEARLAT*SSSPAC
Trigger: GCAGGCGGGACTGCTGCTGCACGTGGCCAACCTGGC...TTCAGGACACCTTGTTCCCAGGCCCTGCAATCCACCAAGCTGGATAGATGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp AGGGAGGATACCACCAAGGGAGCCCACCCTCCCCTCACACCACCAGTTCAGCAGTCCTGGCCATCCACTTaGTGCTGCCCCGTCGAAGCA +
Preference number: 4 (lower is better)
Translates to: REDTTKGAHPPLTPPVQQSWPST*CCPVEA
Trigger: TGCTTCGACGGGGCAGCAGCAAGTGGATGGCCAGGA...CTGCTGAACTGGTGGTGTGAGGGGAGGGTGGGCTCCCTTGGTGGTATCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTGCGTTGCCATAGTTaGCCTGGAAAAAGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGLRCHS*PGKSGP
Trigger: TGGGCCGCTTTTTCCAGGGCAACTATGGCAACGCAG...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR GCA 90 bp GGGAGAGGCACAGGAGCCCATGTGGGATGGAGGAGTCGGCCCCACACCCATCCCGCCACACAGCTGCGTTaGCATAGTTGCCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: GRGTGAHVGWRSRPHTHPATQLR*HSCPGK
Trigger: TTTTCCAGGGCAACTATGGCAACGCAGCTGTGTGGC...GGGATGGGTGTGGGGCCGACTCCTCCATCCCACATGGGCTCCTGTGCCTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp AGGGAGGATACCACCAAGGGAGCCCACCCTCCCCTCACACCACCAGTTCAGCAGTGCAGCTCAGGCCTCTaGCGCTGGGGCCTCATAGTT +
Preference number: 4 (lower is better)
Translates to: REDTTKGAHPPLTPPVQQCSSGL*RWGLIV
Trigger: AACTATGAGGCCCCAGCGGCAGAGGCCTGAGCTGCA...CTGCTGAACTGGTGGTGTGAGGGGAGGGTGGGCTCCCTTGGTGGTATCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp AGGGAGGATACCACCAAGGGAGCCCACCCTCCCCTCACACCACCAGTTCAGCAGAGGTGTCCTGAAGGCTaGAGGGCTGCGCTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: REDTTKGAHPPLTPPVQQRCPEG*RAALSA
Trigger: TGCAGACAGCGCAGCCCTGCAGCCTTCAGGACACCT...CTGCTGAACTGGTGGTGTGAGGGGAGGGTGGGCTCCCTTGGTGGTATCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CTCCCCGGCAGGTCCTGGGACAGCTGTCCACACAGCTCTGGCACTCGCCCTTGTTCCAGCTTGGTGGATTaGAGGGCCTGGGAACAAGGT +
Preference number: 4 (lower is better)
Translates to: LPGRSWDSCPHSSGTRPCSSLVD*RAWEQG
Trigger: ACCTTGTTCCCAGGCCCTGCAATCCACCAAGCTGGA...ACAAGGGCGAGTGCCAGAGCTGTGTGGACAGCTGTCCCAGGACCTGCCGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp TGCAGGGCTGCGCTGTCTGCACTGCCCAGCCTGGTGCCAGAAGAGCAGAGGGCATCCAGCTTGGTGGATTaGAGGGCCTGGGAACAAGGT +
Preference number: 4 (lower is better)
Translates to: CRAALSALPSLVPEEQRASSLVD*RAWEQG
Trigger: ACCTTGTTCCCAGGCCCTGCAATCCACCAAGCTGGA...TGCCCTCTGCTCTTCTGGCACCAGGCTGGGCAGTGCAGACAGCGCAGCCCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGGAGAAACCACCTGGATaGGGTCCACCAGGATGCCAT +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGEKPPG*GPPGCH
Trigger: ATGGCATCCTGGTGGACCCCATCCAGGTGGTTTCTC...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCAACAGAGAAACCACCTaGATGGGGTCCACCAGGATG +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLNRETT*MGSTRM
Trigger: CATCCTGGTGGACCCCATCCAGGTGGTTTCTCTGTT...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCAGGCGCTTCTCAACCTaGAATGCAGCCACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLRRFST*NAATAK
Trigger: CTTTGCTGTGGCTGCATTCCAGGTTGAGAAGCGCCT...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGGGAAACACAGAATGGTaGCCAGGTTGGCCACGTGCA +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGGNTEW*PGWPRA
Trigger: TGCACGTGGCCAACCTGGCCACCATTCTGTGTTTCC...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp TGCAGGGCTGCGCTGTCTGCACTGCCCAGCCTGGTGCCAGAAGAGCAGAGGGCACTGGGAAACACAGAATaGTGGCCAGGTTGGCCACGT +
Preference number: 4 (lower is better)
Translates to: CRAALSALPSLVPEEQRALGNTE*WPGWPR
Trigger: ACGTGGCCAACCTGGCCACCATTCTGTGTTTCCCAG...TGCCCTCTGCTCTTCTGGCACCAGGCTGGGCAGTGCAGACAGCGCAGCCCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTGGGAAACACAGAATaGTGGCCAGGTTGGCCACGT +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGLGNTE*WPGWPR
Trigger: ACGTGGCCAACCTGGCCACCATTCTGTGTTTCCCAG...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCAGCAGGGAGCCCACTaGAGTGATAGACTCAACCAG +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGQQGAH*SDRLNQ
Trigger: CTGGTTGAGTCTATCACTCCAGTGGGCTCCCTGCTG...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp TGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGAGGGAACACCCCTGTCCTaGCCATCCACTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WSPLPANPGPTSSQAEAEGTPLS*PSTCCC
Trigger: GCAGCAGCAAGTGGATGGCCAGGACAGGGGTGTTCC...CTCAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GGGAGAGGCACAGGAGCCCATGTGGGATGGAGGAGTCGGCCCCACACCCATCCCCATGAGGACGGCTATTaGCTGTCCGATGATGAGCGA +
Preference number: 4 (lower is better)
Translates to: GRGTGAHVGWRSRPHTHPHEDGY*LSDDER
Trigger: TCGCTCATCATCGGACAGCCAATAGCCGTCCTCATG...GGGATGGGTGTGGGGCCGACTCCTCCATCCCACATGGGCTCCTGTGCCTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GGCCTCCTGGGGGAAGACGGATGCTTGCAGCTAGCTCCGTGCCTGCCCGACTCCTCATGGAGTTCTGGATaGTGGGGACCATCCACTGCT +
Preference number: 4 (lower is better)
Translates to: GLLGEDGCLQLAPCLPDSSWSSG*WGPSTA
Trigger: AGCAGTGGATGGTCCCCACCATCCAGAACTCCATGA...GGAGTCGGGCAGGCACGGAGCTAGCTGCAAGCATCCGTCTTCCCCCAGGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGGGCTTCATGGAGTTCTaGATGGTGGGGACCATCCAC +
Preference number: 4 (lower is better)
Translates to: LSARASTLCRHGEREPVPGFMEF*MVGTIH
Trigger: GTGGATGGTCCCCACCATCCAGAACTCCATGAAGCC...CGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGGTGCTGGCTCTGGCAGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGGTGGATTGCAGGGCCTaGGAACAAGGTGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGVDCRA*EQGVLK
Trigger: CTTCAGGACACCTTGTTCCCAGGCCCTGCAATCCAC...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGCCCATCTATCCAGCTTaGTGGATTGCAGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: AGAHFPQTQGRPLPKLKLPIYPA*WIAGPG
Trigger: CCCAGGCCCTGCAATCCACCAAGCTGGATAGATGGG...CAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GACACCCTCGGACCCGGGGCAGGGTCAGCAAGACTCCCAGCTGGCATCAGACTGGTTCTCGAGCTCCACTaGCCAACTGATAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: DTLGPGAGSARLPAGIRLVLELH*PTDRER
Trigger: CCTCTCCCTATCAGTTGGCCAGTGGAGCTCGAGAAC...CAGTCTGATGCCAGCTGGGAGTCTTGCTGACCCTGCCCCGGGTCCGAGGGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCAGCCACTGTCAGAGCTaGATAAAGAATCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLSHCQS*IKNPAG
Trigger: GCCTGCAGGATTCTTTATTCAGCTCTGACAGTGGCT...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR TCA 90 bp GCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGGGTCTCCAAACTGCATaGGCTCAGCCACGGCATTCA +
Preference number: 4 (lower is better)
Translates to: AGAHFPQTQGRPLPKLKLGLQTA*AQPRHS
Trigger: TGAATGCCGTGGCTGAGCTCATGCAGTTTGGAGACC...CAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp GCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGTCTGCCAGAAGTAGGTaGCAGACTCGGAGTTCCACC +
Preference number: 4 (lower is better)
Translates to: AGAHFPQTQGRPLPKLKLSARSR*QTRSST
Trigger: GGTGGAACTCCGAGTCTGTCACCTACTTCTGGCAGA...CAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp GATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACAGAGGACGCCTGAGCTaGGCTTTTCTAGGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: DAGRAHCLSARASTLCRHRGRLS*AFLGRG
Trigger: TCCCCTACCTAGAAAAGCTCAGCTCAGGCGTCCTCT...GTGCCTACACAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp TGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGAGTTGACCATCCTGCACTaGGGGCCAGAGTGCCGATTC +
Preference number: 4 (lower is better)
Translates to: WSPLPANPGPTSSQAEAELTILH*GPECRF
Trigger: GAATCGGCACTCTGGCCCTCAGTGCAGGATGGTCAA...CTCAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACCTGCGTTGCCATAGTTaGCCTGGAAAAAGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: DAGRAHCLSARASTLCRHLRCHS*PGKSGP
Trigger: TGGGCCGCTTTTTCCAGGGCAACTATGGCAACGCAG...GTGCCTACACAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGGCCACACAGCTGCGTTaGCATAGTTGCCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGATQLR*HSCPGK
Trigger: TTTTCCAGGGCAACTATGGCAACGCAGCTGTGTGGC...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR GCA 90 bp AGGGAGGATACCACCAAGGGAGCCCACCCTCCCCTCACACCACCAGTTCAGCAGTCCCGGTCTCCAAACTaGATGAGCTCAGCCACGGCA +
Preference number: 4 (lower is better)
Translates to: REDTTKGAHPPLTPPVQQSRSPN*MSSATA
Trigger: TGCCGTGGCTGAGCTCATGCAGTTTGGAGACCGGGA...CTGCTGAACTGGTGGTGTGAGGGGAGGGTGGGCTCCCTTGGTGGTATCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp AGGGAGGATACCACCAAGGGAGCCCACCCTCCCCTCACACCACCAGTTCAGCAGGCTGAGCACGGTGGGTaGAAGTTGACCATCCTGCAC +
Preference number: 4 (lower is better)
Translates to: REDTTKGAHPPLTPPVQQAEHGG*KLTILH
Trigger: GTGCAGGATGGTCAACTTGCACCCACCGTGCTCAGC...CTGCTGAACTGGTGGTGTGAGGGGAGGGTGGGCTCCCTTGGTGGTATCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp TGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGAGTGCCAAACCGAGCCCTaGCCCAAGGCGAATAGCCAT +
Preference number: 4 (lower is better)
Translates to: WSPLPANPGPTSSQAEAECQTEP*PKANSH
Trigger: ATGGCTATTCGCCTTGGGGCAGGGCTCGGTTTGGCA...CTCAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp AGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCTGGCTGGGACCAGCATGTGCTTaGAGTTCTTTATTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: RGAPTSWRAAESHQPTWLGPACA*SSLLRD
Trigger: GTCCCTCAATAAAGAACTGCAAGCACATGCTGGTCC...CAGCCAGGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp AGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCTGGCTGCCCAGGACCAGCATGTaGTTGCAGTTCTTTATTGAG +
Preference number: 4 (lower is better)
Translates to: RGAPTSWRAAESHQPTWLPRTSM*LQFFIE
Trigger: CTCAATAAAGAACTGCAAGCACATGCTGGTCCTGGG...CAGCCAGGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CTTCCCAAGGTGTTCGCACTCGGACAGGTGATGCGGGGCGGGCACACTGTCTTTGAATCCTGCAGGCGATaGCACCTCAGCTCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LPKVFALGQVMRGGHTVFESCRR*HLSSQW
Trigger: CCACTGGGAGCTGAGGTGCCATCGCCTGCAGGATTC...AAAGACAGTGTGCCCGCCCCGCATCACCTGTCCGAGTGCGAACACCTTGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGGAGAAACCACCTGGATaGGGTCCACCAGGATGCCAT +
Preference number: 4 (lower is better)
Translates to: AGAHFPQTQGRPLPKLKLEKPPG*GPPGCH
Trigger: ATGGCATCCTGGTGGACCCCATCCAGGTGGTTTCTC...CAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp TGCAGGGCTGCGCTGTCTGCACTGCCCAGCCTGGTGCCAGAAGAGCAGAGGGCAAACAGAGAAACCACCTaGATGGGGTCCACCAGGATG +
Preference number: 4 (lower is better)
Translates to: CRAALSALPSLVPEEQRANRETT*MGSTRM
Trigger: CATCCTGGTGGACCCCATCCAGGTGGTTTCTCTGTT...TGCCCTCTGCTCTTCTGGCACCAGGCTGGGCAGTGCAGACAGCGCAGCCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CGGACAGGTGATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGAGGCGCTTCTCAACCTaGAATGCAGCCACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: RTGDAGRAHCLSARASTLRRFST*NAATAK
Trigger: CTTTGCTGTGGCTGCATTCCAGGTTGAGAAGCGCCT...CAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATCACCTGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGAGGCGCTTCTCAACCTaGAATGCAGCCACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGRRFST*NAATAK
Trigger: CTTTGCTGTGGCTGCATTCCAGGTTGAGAAGCGCCT...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp GCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGGGAAACACAGAATGGTaGCCAGGTTGGCCACGTGCA +
Preference number: 4 (lower is better)
Translates to: AGAHFPQTQGRPLPKLKLGNTEW*PGWPRA
Trigger: TGCACGTGGCCAACCTGGCCACCATTCTGTGTTTCC...CAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCATGAGGACGGCTATTaGCTGTCCGATGATGAGCGA +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGHEDGY*LSDDER
Trigger: TCGCTCATCATCGGACAGCCAATAGCCGTCCTCATG...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CCA 90 bp GCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGAGCAAGACTCCCAGCTaGCATCAGACTGTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: AGAHFPQTQGRPLPKLKLSKTPS*HQTVSG
Trigger: GCCAGACACAGTCTGATGCCAGCTGGGAGTCTTGCT...CAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GGCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGCTCGTAGCACAAGGTaGGGGCGAAGAGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: GWSPLPANPGPTSSQAEAARSTR*GRRGSS
Trigger: ACTACTTCCTCTTCGCCCCCACCTTGTGCTACGAGC...AGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACGGCTTCATGGAGTTCTaGATGGTGGGGACCATCCAC +
Preference number: 4 (lower is better)
Translates to: DAGRAHCLSARASTLCRHGFMEF*MVGTIH
Trigger: GTGGATGGTCCCCACCATCCAGAACTCCATGAAGCC...GTGCCTACACAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACTCAGCCTGGTGGAGGAAGGGAACTGGGCCATCCTGGCTaGAGCCCACTTCCCGCAAAC +
Preference number: 4 (lower is better)
Translates to: GACPVALGFSTQPGGGRELGHPG*SPLPAN
Trigger: GTTTGCGGGAAGTGGGCTCCAGCCAGGATGGCCCAG...TTCCCTTCCTCCACCAGGCTGAGTGGAGAACCCTAAAGCTACGGGACAGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GCCCCATCTATCCAGCTTGGTGGATTGCAGGGCCTGGGAACAAGGTGTCCTGAAATCCCTGGGCCATCCTaGCTGGAGCCCACTTCCCGC +
Preference number: 4 (lower is better)
Translates to: APSIQLGGLQGLGTRCPEIPGPS*LEPTSR
Trigger: GCGGGAAGTGGGCTCCAGCCAGGATGGCCCAGGGAT...TTCAGGACACCTTGTTCCCAGGCCCTGCAATCCACCAAGCTGGATAGATGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACTCAGCCTGGTGGAGGAAGGGAAACCAGAAAGGCCCTGTaGACTGCCCATCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GACPVALGFSTQPGGGRETRKAL*TAHPWA
Trigger: GGCCCAGGGATGGGCAGTCCACAGGGCCTTTCTGGT...TTCCCTTCCTCCACCAGGCTGAGTGGAGAACCCTAAAGCTACGGGACAGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACCCCATCTATCCAGCTTaGTGGATTGCAGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PCVGTGNGSLSRSFRVLHPIYPA*WIAGPG
Trigger: CCCAGGCCCTGCAATCCACCAAGCTGGATAGATGGG...GTGGAGAACCCTAAAGCTACGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CAGCAACAGTTTGTTCTCGAGCTCCACTGGCCAACTGATAGGGAGAGGCACAGGCCCCTGGTGCAGTCCTaGGACCCTGTGCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: QQQFVLELHWPTDRERHRPLVQS*DPVQGL
Trigger: GAGGCCCTGCACAGGGTCCCAGGACTGCACCAGGGG...CCTGTGCCTCTCCCTATCAGTTGGCCAGTGGAGCTCGAGAACAAACTGTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GCCCCATCTATCCAGCTTGGTGGATTGCAGGGCCTGGGAACAAGGTGTCCTGAAGGAGCCCATGTGGGATaGAGGAGTCGGCCCCACACC +
Preference number: 4 (lower is better)
Translates to: APSIQLGGLQGLGTRCPEGAHVG*RSRPHT
Trigger: GGTGTGGGGCCGACTCCTCCATCCCACATGGGCTCC...TTCAGGACACCTTGTTCCCAGGCCCTGCAATCCACCAAGCTGGATAGATGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GCCCCATCTATCCAGCTTGGTGGATTGCAGGGCCTGGGAACAAGGTGTCCTGAAGTGGGCGCCTCACCTTaGCCCTGGGGGTCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: APSIQLGGLQGLGTRCPEVGASP*PWGSLV
Trigger: AACCAGAGACCCCCAGGGCCAAGGTGAGGCGCCCAC...TTCAGGACACCTTGTTCCCAGGCCCTGCAATCCACCAAGCTGGATAGATGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGAGCCACTGTCAGAGCTaGATAAAGAATCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGSHCQS*IKNPAG
Trigger: GCCTGCAGGATTCTTTATTCAGCTCTGACAGTGGCT...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR TCA 90 bp AGGGAGGATACCACCAAGGGAGCCCACCCTCCCCTCACACCACCAGTTCAGCAGGGTCTCCAAACTGCATaGGCTCAGCCACGGCATTCA +
Preference number: 4 (lower is better)
Translates to: REDTTKGAHPPLTPPVQQGLQTA*AQPRHS
Trigger: TGAATGCCGTGGCTGAGCTCATGCAGTTTGGAGACC...CTGCTGAACTGGTGGTGTGAGGGGAGGGTGGGCTCCCTTGGTGGTATCCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp AGGGAGGATACCACCAAGGGAGCCCACCCTCCCCTCACACCACCAGTTCAGCAGAGAGGACGCCTGAGCTaGGCTTTTCTAGGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: REDTTKGAHPPLTPPVQQRGRLS*AFLGRG
Trigger: TCCCCTACCTAGAAAAGCTCAGCTCAGGCGTCCTCT...CTGCTGAACTGGTGGTGTGAGGGGAGGGTGGGCTCCCTTGGTGGTATCCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp GCCCCATCTATCCAGCTTGGTGGATTGCAGGGCCTGGGAACAAGGTGTCCTGAACCCTGGGGTTACCCCTaGCCTCCCGCTACCATCAAG +
Preference number: 4 (lower is better)
Translates to: APSIQLGGLQGLGTRCPEPWGYP*PPATIK
Trigger: CTTGATGGTAGCGGGAGGTCAGGGGTAACCCCAGGG...TTCAGGACACCTTGTTCCCAGGCCCTGCAATCCACCAAGCTGGATAGATGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACTCAGCCTGGTGGAGGAAGGGAACTCAAGGACAACGGCTaGGTTGCTCCGGAGCCGCTA +
Preference number: 4 (lower is better)
Translates to: GACPVALGFSTQPGGGRELKDNG*VAPEPL
Trigger: TAGCGGCTCCGGAGCAACGCAGCCGTTGTCCTTGAG...TTCCCTTCCTCCACCAGGCTGAGTGGAGAACCCTAAAGCTACGGGACAGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTGAATAAAGAATCCTaGAGGCGATGGCACCTCAGC +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGLNKES*RRWHLS
Trigger: GCTGAGGTGCCATCGCCTGCAGGATTCTTTATTCAG...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR GCA 90 bp AGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCTGGCTGGAAATAACCGGGCATTaGTCAAGATCAGCATCACCA +
Preference number: 4 (lower is better)
Translates to: RGAPTSWRAAESHQPTWLEITGH*SRSASP
Trigger: TGGTGATGCTGATCTTGAGCAATGCCCGGTTATTTC...CAGCCAGGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CTTCCCAAGGTGTTCGCACTCGGACAGGTGATGCGGGGCGGGCACACTGTCTTTCGACAGCCACACAGCTaGGTTGCCATAGTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LPKVFALGQVMRGGHTVFRQPHS*VAIVAL
Trigger: CAGGGCAACTATGGCAACGCAGCTGTGTGGCTGTCG...AAAGACAGTGTGCCCGCCCCGCATCACCTGTCCGAGTGCGAACACCTTGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GCCCCATCTATCCAGCTTGGTGGATTGCAGGGCCTGGGAACAAGGTGTCCTGAAGCTGGCCTTCTTCCCTaGAGAGGCAGCCTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: APSIQLGGLQGLGTRCPEAGLLP*RGSLGP
Trigger: AGGGCCAAGGCTGCCTCTGCAGGGAAGAAGGCCAGC...TTCAGGACACCTTGTTCCCAGGCCCTGCAATCCACCAAGCTGGATAGATGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp TGCAGGGCTGCGCTGTCTGCACTGCCCAGCCTGGTGCCAGAAGAGCAGAGGGCACTGATGCACCACTTGTaGACAGGGATGTTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: CRAALSALPSLVPEEQRALMHHL*TGMFQF
Trigger: GAACTGGAACATCCCTGTGCACAAGTGGTGCATCAG...TGCCCTCTGCTCTTCTGGCACCAGGCTGGGCAGTGCAGACAGCGCAGCCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACTCAGCCTGGTGGAGGAAGGGAACCATCCACTTGCTGCTaGCCCGTCGAAGCATGGGCT +
Preference number: 4 (lower is better)
Translates to: GACPVALGFSTQPGGGREPSTCC*PVEAWA
Trigger: AGCCCATGCTTCGACGGGGCAGCAGCAAGTGGATGG...TTCCCTTCCTCCACCAGGCTGAGTGGAGAACCCTAAAGCTACGGGACAGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CAGCAACAGTTTGTTCTCGAGCTCCACTGGCCAACTGATAGGGAGAGGCACAGGCTGCTGCAGTGGAGCTaGTGCTCCCCGGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: QQQFVLELHWPTDRERHRLLQWS*CSPAGP
Trigger: AGGACCTGCCGGGGAGCAGCAGCTCCACTGCAGCAG...CCTGTGCCTCTCCCTATCAGTTGGCCAGTGGAGCTCGAGAACAAACTGTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACTCAGCCTGGTGGAGGAAGGGAAAGGTGTCCTGAAGGCTaGAGGGCTGCGCTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: GACPVALGFSTQPGGGRERCPEG*RAALSA
Trigger: TGCAGACAGCGCAGCCCTGCAGCCTTCAGGACACCT...TTCCCTTCCTCCACCAGGCTGAGTGGAGAACCCTAAAGCTACGGGACAGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GACACCCTCGGACCCGGGGCAGGGTCAGCAAGACTCCCAGCTGGCATCAGACTGTGGAGCAGGCTTTGCTaGTTTATCTGGCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: DTLGPGAGSARLPAGIRLWSRLC*FIWQQQ
Trigger: CTGTTGCTGCCAGATAAAGCAGCAAAGCCTGCTCCA...CAGTCTGATGCCAGCTGGGAGTCTTGCTGACCCTGCCCCGGGTCCGAGGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGTGGAGCAGGCTTTGCTaGTTTATCTGGCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGWSRLC*FIWQQQ
Trigger: CTGTTGCTGCCAGATAAAGCAGCAAAGCCTGCTCCA...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GGGCGCCTCACCTTGGCCCTGGGGGTCTCTGGTTGTCACAGGACCACCAGGAACCAGTGGAGCAGGCTTTaGTGCTTTATCTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: GRLTLALGVSGCHRTTRNQWSRL*CFIWQQ
Trigger: TTGCTGCCAGATAAAGCAGCAAAGCCTGCTCCACTG...GTTCCTGGTGGTCCTGTGACAACCAGAGACCCCCAGGGCCAAGGTGAGGCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACAACAGAGAAACCACCTaGATGGGGTCCACCAGGATG +
Preference number: 4 (lower is better)
Translates to: DAGRAHCLSARASTLCRHNRETT*MGSTRM
Trigger: CATCCTGGTGGACCCCATCCAGGTGGTTTCTCTGTT...GTGCCTACACAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACGGAAACACAGAATGGTaGCCAGGTTGGCCACGTGCA +
Preference number: 4 (lower is better)
Translates to: PCVGTGNGSLSRSFRVLHGNTEW*PGWPRA
Trigger: TGCACGTGGCCAACCTGGCCACCATTCTGTGTTTCC...GTGGAGAACCCTAAAGCTACGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CTTCCCAAGGTGTTCGCACTCGGACAGGTGATGCGGGGCGGGCACACTGTCTTTGCATCAGACTGTGTCTaGCCTGCTGTCGCCATCCCT +
Preference number: 4 (lower is better)
Translates to: LPKVFALGQVMRGGHTVFASDCV*PAVAIP
Trigger: AGGGATGGCGACAGCAGGCCAGACACAGTCTGATGC...AAAGACAGTGTGCCCGCCCCGCATCACCTGTCCGAGTGCGAACACCTTGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACATCTATCCAGCTTGGTaGATTGCAGGGCCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: DAGRAHCLSARASTLCRHIYPAW*IAGPGN
Trigger: GTTCCCAGGCCCTGCAATCCACCAAGCTGGATAGAT...GTGCCTACACAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACTCAGCCTGGTGGAGGAAGGGAAGGGGACACCAGGGCCTaGTCCAGTCTTGGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: GACPVALGFSTQPGGGREGDTRA*SSLGVF
Trigger: AAAGACCCCAAGACTGGACCAGGCCCTGGTGTCCCC...TTCCCTTCCTCCACCAGGCTGAGTGGAGAACCCTAAAGCTACGGGACAGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CAGCAACAGTTTGTTCTCGAGCTCCACTGGCCAACTGATAGGGAGAGGCACAGGGAAGGGGGCCTGCGCTaGGCAGTGGAGCAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: QQQFVLELHWPTDRERHREGGLR*AVEQAL
Trigger: CAAAGCCTGCTCCACTGCCCAGCGCAGGCCCCCTTC...CCTGTGCCTCTCCCTATCAGTTGGCCAGTGGAGCTCGAGAACAAACTGTTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp GGCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTAGCCACTGTCAGAGCTaGATAAAGAATCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GWSPLPANPGPTSSQAEASHCQS*IKNPAG
Trigger: GCCTGCAGGATTCTTTATTCAGCTCTGACAGTGGCT...AGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp CCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACGCGCTCGATGATGCGTaGGTAGTCCATGTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: PCVGTGNGSLSRSFRVLHALDDA*VVHVLE
Trigger: TTCAAGGACATGGACTACTCACGCATCATCGAGCGC...GTGGAGAACCCTAAAGCTACGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp CTTCCCAAGGTGTTCGCACTCGGACAGGTGATGCGGGGCGGGCACACTGTCTTTTCAGGAGGCGCTCGATaGTGCGTGAGTAGTCCATGT +
Preference number: 4 (lower is better)
Translates to: LPKVFALGQVMRGGHTVFSGGAR*CVSSPC
Trigger: ACATGGACTACTCACGCATCATCGAGCGCCTCCTGA...AAAGACAGTGTGCCCGCCCCGCATCACCTGTCCGAGTGCGAACACCTTGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp GCCCCATCTATCCAGCTTGGTGGATTGCAGGGCCTGGGAACAAGGTGTCCTGAATGGACAGCACTTTATTaGCACCCTCGGACCCGGGGC +
Preference number: 4 (lower is better)
Translates to: APSIQLGGLQGLGTRCPEWTALY*HPRTRG
Trigger: GCCCCGGGTCCGAGGGTGTCAATAAAGTGCTGTCCA...TTCAGGACACCTTGTTCCCAGGCCCTGCAATCCACCAAGCTGGATAGATGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GGCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTCTGAATAAAGAATCCTaGAGGCGATGGCACCTCAGC +
Preference number: 4 (lower is better)
Translates to: GWSPLPANPGPTSSQAEALNKES*RRWHLS
Trigger: GCTGAGGTGCCATCGCCTGCAGGATTCTTTATTCAG...AGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCGAAATAACCGGGCATTaGTCAAGATCAGCATCACCA +
Preference number: 4 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLEITGH*SRSASP
Trigger: TGGTGATGCTGATCTTGAGCAATGCCCGGTTATTTC...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR GCA 90 bp GCCCCATCTATCCAGCTTGGTGGATTGCAGGGCCTGGGAACAAGGTGTCCTGAATGGCCATCCACTTGCTaGTGCCCCGTCGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: APSIQLGGLQGLGTRCPEWPSTC*CPVEAW
Trigger: CCATGCTTCGACGGGGCAGCAGCAAGTGGATGGCCA...TTCAGGACACCTTGTTCCCAGGCCCTGCAATCCACCAAGCTGGATAGATGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp TGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGAGGCCACACAGCTGCGTTaGCATAGTTGCCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: WSPLPANPGPTSSQAEAEATQLR*HSCPGK
Trigger: TTTTCCAGGGCAACTATGGCAACGCAGCTGTGTGGC...CTCAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GGCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTCTGATGCACCACTTGTaGACAGGGATGTTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: GWSPLPANPGPTSSQAEALMHHL*TGMFQF
Trigger: GAACTGGAACATCCCTGTGCACAAGTGGTGCATCAG...AGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GCCCCATCTATCCAGCTTGGTGGATTGCAGGGCCTGGGAACAAGGTGTCCTGAAGAGCTCACCCACTACTaGCATCCTCAGCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: APSIQLGGLQGLGTRCPEELTHY*HPQQGP
Trigger: TGGGCCCTGCTGAGGATGGCAGTAGTGGGTGAGCTC...TTCAGGACACCTTGTTCCCAGGCCCTGCAATCCACCAAGCTGGATAGATGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GGCCAGAGTGCCGATTCCCGCACACCCAGCAGGAGTAGCACCAGGAGAGGACGCGGACCAGCATGTGCTTaGAGTTCTTTATTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: GQSADSRTPSRSSTRRGRGPACA*SSLLRD
Trigger: GTCCCTCAATAAAGAACTGCAAGCACATGCTGGTCC...GCGTCCTCTCCTGGTGCTACTCCTGCTGGGTGTGCGGGAATCGGCACTCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp TGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGAGAAACACCTGCCTTGTTaGGCCATAGCTGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: WSPLPANPGPTSSQAEAEKHLPC*AIAAGL
Trigger: CAGACCTGCAGCTATGGCCCAACAAGGCAGGTGTTT...CTCAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp CCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACAGCCACTGTCAGAGCTaGATAAAGAATCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PCVGTGNGSLSRSFRVLHSHCQS*IKNPAG
Trigger: GCCTGCAGGATTCTTTATTCAGCTCTGACAGTGGCT...GTGGAGAACCCTAAAGCTACGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp GCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGAGTAGTCCATGTCCTTaGAGGGCTTCATGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: AGAHFPQTQGRPLPKLKLSSPCP*RASWSS
Trigger: AGAACTCCATGAAGCCCTTCAAGGACATGGACTACT...CAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp AGGGAGGATACCACCAAGGGAGCCCACCCTCCCCTCACACCACCAGTTCAGCAGCTGAATAAAGAATCCTaGAGGCGATGGCACCTCAGC +
Preference number: 4 (lower is better)
Translates to: REDTTKGAHPPLTPPVQQLNKES*RRWHLS
Trigger: GCTGAGGTGCCATCGCCTGCAGGATTCTTTATTCAG...CTGCTGAACTGGTGGTGTGAGGGGAGGGTGGGCTCCCTTGGTGGTATCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGGAAATAACCGGGCATTaGTCAAGATCAGCATCACCA +
Preference number: 4 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGEITGH*SRSASP
Trigger: TGGTGATGCTGATCTTGAGCAATGCCCGGTTATTTC...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR GCA 90 bp CAGCAACAGTTTGTTCTCGAGCTCCACTGGCCAACTGATAGGGAGAGGCACAGGTGGCCATCCACTTGCTaGTGCCCCGTCGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: QQQFVLELHWPTDRERHRWPSTC*CPVEAW
Trigger: CCATGCTTCGACGGGGCAGCAGCAAGTGGATGGCCA...CCTGTGCCTCTCCCTATCAGTTGGCCAGTGGAGCTCGAGAACAAACTGTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CAGCAACAGTTTGTTCTCGAGCTCCACTGGCCAACTGATAGGGAGAGGCACAGGTCTGTCCCAGGGTGGTaGGGTGGGTGGTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: QQQFVLELHWPTDRERHRSVPGW*GGWCCN
Trigger: ATTGCAGCACCACCCACCGCACCACCCTGGGACAGA...CCTGTGCCTCTCCCTATCAGTTGGCCAGTGGAGCTCGAGAACAAACTGTTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CTCCCCGGCAGGTCCTGGGACAGCTGTCCACACAGCTCTGGCACTCGCCCTTGTAACAGACAGGCTCTATaGTATGGCCTCCATGTGTTT +
Preference number: 4 (lower is better)
Translates to: LPGRSWDSCPHSSGTRPCNRQAL*YGLHVF
Trigger: AAACACATGGAGGCCATAGCATAGAGCCTGTCTGTT...ACAAGGGCGAGTGCCAGAGCTGTGTGGACAGCTGTCCCAGGACCTGCCGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp CGGACAGGTGATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGAACAGACAGGCTCTATaGTATGGCCTCCATGTGTTT +
Preference number: 4 (lower is better)
Translates to: RTGDAGRAHCLSARASTLNRQAL*YGLHVF
Trigger: AAACACATGGAGGCCATAGCATAGAGCCTGTCTGTT...CAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATCACCTGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACTCAGCCTGGTGGAGGAAGGGAAGAGAAACCACCTGGATaGGGTCCACCAGGATGCCAT +
Preference number: 4 (lower is better)
Translates to: GACPVALGFSTQPGGGREEKPPG*GPPGCH
Trigger: ATGGCATCCTGGTGGACCCCATCCAGGTGGTTTCTC...TTCCCTTCCTCCACCAGGCTGAGTGGAGAACCCTAAAGCTACGGGACAGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CAGCAACAGTTTGTTCTCGAGCTCCACTGGCCAACTGATAGGGAGAGGCACAGGCGCAATAACCAGGCATaGGGCGGGCCAGCTATAGGG +
Preference number: 4 (lower is better)
Translates to: QQQFVLELHWPTDRERHRRNNQA*GGPAIG
Trigger: CCCTATAGCTGGCCCGCCCCATGCCTGGTTATTGCG...CCTGTGCCTCTCCCTATCAGTTGGCCAGTGGAGCTCGAGAACAAACTGTTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GCCCCATCTATCCAGCTTGGTGGATTGCAGGGCCTGGGAACAAGGTGTCCTGAAGCATCAGACTGTGTCTaGCCTGCTGTCGCCATCCCT +
Preference number: 4 (lower is better)
Translates to: APSIQLGGLQGLGTRCPEASDCV*PAVAIP
Trigger: AGGGATGGCGACAGCAGGCCAGACACAGTCTGATGC...TTCAGGACACCTTGTTCCCAGGCCCTGCAATCCACCAAGCTGGATAGATGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACTCAGCCTGGTGGAGGAAGGGAAGTGGATTGCAGGGCCTaGGAACAAGGTGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GACPVALGFSTQPGGGREVDCRA*EQGVLK
Trigger: CTTCAGGACACCTTGTTCCCAGGCCCTGCAATCCAC...TTCCCTTCCTCCACCAGGCTGAGTGGAGAACCCTAAAGCTACGGGACAGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GGCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGAAATAACCGGGCATTaGTCAAGATCAGCATCACCA +
Preference number: 4 (lower is better)
Translates to: GWSPLPANPGPTSSQAEAEITGH*SRSASP
Trigger: TGGTGATGCTGATCTTGAGCAATGCCCGGTTATTTC...AGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp TGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGAGCCCAGGACCAGCATGTaGTTGCAGTTCTTTATTGAG +
Preference number: 4 (lower is better)
Translates to: WSPLPANPGPTSSQAEAEPRTSM*LQFFIE
Trigger: CTCAATAAAGAACTGCAAGCACATGCTGGTCCTGGG...CTCAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GCCCCATCTATCCAGCTTGGTGGATTGCAGGGCCTGGGAACAAGGTGTCCTGAACAGCAGGGAGCCCACTaGAGTGATAGACTCAACCAG +
Preference number: 4 (lower is better)
Translates to: APSIQLGGLQGLGTRCPEQQGAH*SDRLNQ
Trigger: CTGGTTGAGTCTATCACTCCAGTGGGCTCCCTGCTG...TTCAGGACACCTTGTTCCCAGGCCCTGCAATCCACCAAGCTGGATAGATGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CAGCAACAGTTTGTTCTCGAGCTCCACTGGCCAACTGATAGGGAGAGGCACAGGCACGAACCAGGCCAGTaGGATCTGAGCCATCATGCC +
Preference number: 4 (lower is better)
Translates to: QQQFVLELHWPTDRERHRHEPGQ*DLSHHA
Trigger: GGCATGATGGCTCAGATCCCACTGGCCTGGTTCGTG...CCTGTGCCTCTCCCTATCAGTTGGCCAGTGGAGCTCGAGAACAAACTGTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GCCCCATCTATCCAGCTTGGTGGATTGCAGGGCCTGGGAACAAGGTGTCCTGAAGTTCTCGAGCTCCACTaGCCAACTGATAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: APSIQLGGLQGLGTRCPEVLELH*PTDRER
Trigger: CCTCTCCCTATCAGTTGGCCAGTGGAGCTCGAGAAC...TTCAGGACACCTTGTTCCCAGGCCCTGCAATCCACCAAGCTGGATAGATGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp AGATCTATAAACAGACAGGCTCTATGCTATGGCCTCCATGTGTTTCCTCTGTCCAGCCAGGCCCTCAGGTaGAGCTCAGGCCTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: RSINRQALCYGLHVFPLSSQALR*SSGLCR
Trigger: GCGGCAGAGGCCTGAGCTGCACCTGAGGGCCTGGCT...GGACAGAGGAAACACATGGAGGCCATAGCATAGAGCCTGTCTGTTTATAGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR GCA 90 bp GGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACTCAGCCTGGTGGAGGAAGGGAACAGTGGAGCAGGCTTTaGTGCTTTATCTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: GACPVALGFSTQPGGGREQWSRL*CFIWQQ
Trigger: TTGCTGCCAGATAAAGCAGCAAAGCCTGCTCCACTG...TTCCCTTCCTCCACCAGGCTGAGTGGAGAACCCTAAAGCTACGGGACAGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp GGCTGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTCTTTGCTGCTTTATCTaGCAGCAACAGTTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: GWSPLPANPGPTSSQAEALCCFI*QQQFVL
Trigger: GAGAACAAACTGTTGCTGCCAGATAAAGCAGCAAAG...AGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp CAGCAACAGTTTGTTCTCGAGCTCCACTGGCCAACTGATAGGGAGAGGCACAGGCATGAGGACGGCTATTaGCTGTCCGATGATGAGCGA +
Preference number: 4 (lower is better)
Translates to: QQQFVLELHWPTDRERHRHEDGY*LSDDER
Trigger: TCGCTCATCATCGGACAGCCAATAGCCGTCCTCATG...CCTGTGCCTCTCCCTATCAGTTGGCCAGTGGAGCTCGAGAACAAACTGTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp AGATCTATAAACAGACAGGCTCTATGCTATGGCCTCCATGTGTTTCCTCTGTCCGGGCAGCAGCACTGCTaGCCTTCTTCCCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RSINRQALCYGLHVFPLSGQQHC*PSSLQR
Trigger: CCTCTGCAGGGAAGAAGGCCAGCAGTGCTGCTGCCC...GGACAGAGGAAACACATGGAGGCCATAGCATAGAGCCTGTCTGTTTATAGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp AGATCTATAAACAGACAGGCTCTATGCTATGGCCTCCATGTGTTTCCTCTGTCCCTGCACTGCCCAGCCTaGTGCCAGAAGAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: RSINRQALCYGLHVFPLSLHCPA*CQKSRG
Trigger: CCCTCTGCTCTTCTGGCACCAGGCTGGGCAGTGCAG...GGACAGAGGAAACACATGGAGGCCATAGCATAGAGCCTGTCTGTTTATAGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
3UTR CAA 72 bp GGAGCAGGCTTTGCTGCTTTATCTGGCAGCAACAGTTaGTTCTCGAGCTCCACTGGCCAACTGATAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GAGFAALSGSNS*FSSSTGQLIGR
Trigger: TCTCCCTATCAGTTGGCCAGTGGAGCTCGAGAACAAACTGTTGCTGCCAGATAAAGCAGCAAAGCCTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp AGATCTATAAACAGACAGGCTCTATGCTATGGCCTCCATGTGTTTCCTCTGTCCGCCTCACCTTGGCCCTaGGGGTCTCTGGTTGTCACA +
Preference number: 4 (lower is better)
Translates to: RSINRQALCYGLHVFPLSASPWP*GSLVVT
Trigger: TGTGACAACCAGAGACCCCCAGGGCCAAGGTGAGGC...GGACAGAGGAAACACATGGAGGCCATAGCATAGAGCCTGTCTGTTTATAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CCA 90 bp AGATCTATAAACAGACAGGCTCTATGCTATGGCCTCCATGTGTTTCCTCTGTCCAGGCGCTTCTCAACCTaGAATGCAGCCACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: RSINRQALCYGLHVFPLSRRFST*NAATAK
Trigger: CTTTGCTGTGGCTGCATTCCAGGTTGAGAAGCGCCT...GGACAGAGGAAACACATGGAGGCCATAGCATAGAGCCTGTCTGTTTATAGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR TCA 90 bp AGATCTATAAACAGACAGGCTCTATGCTATGGCCTCCATGTGTTTCCTCTGTCCAGTAGTCCATGTCCTTaGAGGGCTTCATGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: RSINRQALCYGLHVFPLSSSPCP*RASWSS
Trigger: AGAACTCCATGAAGCCCTTCAAGGACATGGACTACT...GGACAGAGGAAACACATGGAGGCCATAGCATAGAGCCTGTCTGTTTATAGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS CCA 90 bp GACTCAGGCCTCCACAGCGCCACAGCCGGAGGCCATGCCCGTGGCTaGCCCGAGACAGATGGGCAGGGTGGGATGGGGGCGCACCTGGAG +
Preference number: 5 (lower is better)
Translates to: DSGLHSATAGGHARG*PETDGQGGMGAHLE
Trigger: CTCCAGGTGCGCCCCCATCCCACCCTGCCCATCTGTCTCGGGCCAGCCACGGGCATGGCCTCCGGCTGTGGCGCTGTGGAGGCCTGAGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525371.1
ENST00000642490.1
CDS CCA 90 bp GGTGGACTCAGGCCTCCACAGCGCCACAGCCGGAGGCCATGCCCGTaGCTGGCCCGAGACAGATGGGCAGGGTGGGATGGGGGCGCACCT +
Preference number: 5 (lower is better)
Translates to: GGLRPPQRHSRRPCP*LARDRWAGWDGGAP
Trigger: AGGTGCGCCCCCATCCCACCCTGCCCATCTGTCTCGGGCCAGCCACGGGCATGGCCTCCGGCTGTGGCGCTGTGGAGGCCTGAGTCCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525371.1
ENST00000642490.1
CDS-3UTR CAA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCGCGTCTCCGTCCTTGTaGGGGGCCGGGGCTGGCGCG +
Preference number: 5 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLASPSL*GAGAGA
Trigger: CGCGCCAGCCCCGGCCCCCAACAAGGACGGAGACGC...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS GCA 90 bp AGGAGAGGTGGACTCAGGCCTCCACAGCGCCACAGCCGGAGGCCATaGCCGTGGCTGGCCCGAGACAGATGGGCAGGGTGGGATGGGGGC +
Preference number: 5 (lower is better)
Translates to: RRGGLRPPQRHSRRP*PWLARDRWAGWDGG
Trigger: GCCCCCATCCCACCCTGCCCATCTGTCTCGGGCCAGCCACGGGCATGGCCTCCGGCTGTGGCGCTGTGGAGGCCTGAGTCCACCTCTCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525371.1
ENST00000642490.1
CDS-3UTR CAA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGGCGTCTCCGTCCTTGTaGGGGGCCGGGGCTGGCGCG +
Preference number: 5 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGASPSL*GAGAGA
Trigger: CGCGCCAGCCCCGGCCCCCAACAAGGACGGAGACGC...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CAA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCCGGCGTCTCCGTCCTaGTTGGGGGCCGGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGPASPS*LGAGAG
Trigger: GCCAGCCCCGGCCCCCAACAAGGACGGAGACGCCGG...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS CCA 90 bp TGGTGTGCGCCATCAGCGCCAGCAGGGAGCCCACTGCAGGAGAGGTaGACTCAGGCCTCCACAGCGCCACAGCCGGAGGCCATGCCCGTG +
Preference number: 5 (lower is better)
Translates to: WCAPSAPAGSPLQER*TQASTAPQPEAMPV
Trigger: CACGGGCATGGCCTCCGGCTGTGGCGCTGTGGAGGCCTGAGTCCACCTCTCCTGCAGTGGGCTCCCTGCTGGCGCTGATGGCGCACACCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525371.1
ENST00000642490.1
CDS-3UTR CAA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCGAAGCATGGGCAGCCTaGGCCCTGGCCCTGCGGCAC +
Preference number: 5 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLEAWAA*ALALRH
Trigger: GTGCCGCAGGGCCAGGGCCAAGGCTGCCCATGCTTC...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332324.5
ENST00000645871.1
CDS GCA 90 bp GTTCAACCCGCCCGCGTCGGGCCCGTCGGCCTCAAGGACAACGGCTaGGTTGCTCCGGAGCCGCTAACTAATGGACGGCCGCCTCTCTCG +
Preference number: 5 (lower is better)
Translates to: VQPARVGPVGLKDNG*VAPEPLTNGRPPLS
Trigger: CGAGAGAGGCGGCCGTCCATTAGTTAGCGGCTCCGGAGCAACGCAGCCGTTGTCCTTGAGGCCGACGGGCCCGACGCGGGCGGGTTGAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332324.5
ENST00000645871.1
CDS CCA 90 bp CAGCGCCACAGCCGGAGGCCATGCCCGTGGCTGGCCCGAGACAGATaGGCAGGGTGGGATGGGGGCGCACCTGGAGTGATAGACTCAACC +
Preference number: 5 (lower is better)
Translates to: QRHSRRPCPWLARDR*AGWDGGAPGVIDST
Trigger: GGTTGAGTCTATCACTCCAGGTGCGCCCCCATCCCACCCTGCCCATCTGTCTCGGGCCAGCCACGGGCATGGCCTCCGGCTGTGGCGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525371.1
ENST00000642490.1
CDS-3UTR CAA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGGAAGCATGGGCAGCCTaGGCCCTGGCCCTGCGGCAC +
Preference number: 5 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGEAWAA*ALALRH
Trigger: GTGCCGCAGGGCCAGGGCCAAGGCTGCCCATGCTTC...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332324.5
ENST00000645871.1
CDS-3UTR CAA 90 bp GGGATCAGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCGTCCTGGCCATCCACTaGCTGCTGCCCCGTCGAAGC +
Preference number: 5 (lower is better)
Translates to: GIRGAPTSWRAAESHQPTVLAIH*LLPRRS
Trigger: GCTTCGACGGGGCAGCAGCAAGTGGATGGCCAGGAC...GGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCTGATCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS GCA 90 bp ACCACAGCCGCTGGGAAACACAGAATGGTGGCCAGGTTGGCCACGTaGAGCAGCAGTCCCGCCTGCTCCGTCAGGGCACCCACCGCCAGG +
Preference number: 5 (lower is better)
Translates to: TTAAGKHRMVARLAT*SSSPACSVRAPTAR
Trigger: CCTGGCGGTGGGTGCCCTGACGGAGCAGGCGGGACTGCTGCTGCACGTGGCCAACCTGGCCACCATTCTGTGTTTCCCAGCGGCTGTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000332324.5
ENST00000524965.5
ENST00000525371.1
ENST00000528718.6
ENST00000531896.5
ENST00000642490.1
ENST00000644790.2
ENST00000645798.1
ENST00000645871.1
ENST00000646692.1
CDS-3UTR CAA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCGTCCTGGCCATCCACTaGCTGCTGCCCCGTCGAAGC +
Preference number: 5 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLVLAIH*LLPRRS
Trigger: GCTTCGACGGGGCAGCAGCAAGTGGATGGCCAGGAC...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS CCA 90 bp ACACCCCTGTCCTGGCCATCCACTTGCTGCTGCCCCGTCGAAGCATaGGCAGCCTTGGCCCTGGCCCTGCGGCACCATGAGTTGACGTCG +
Preference number: 5 (lower is better)
Translates to: TPLSWPSTCCCPVEA*AALALALRHHELTS
Trigger: CGACGTCAACTCATGGTGCCGCAGGGCCAGGGCCAAGGCTGCCCATGCTTCGACGGGGCAGCAGCAAGTGGATGGCCAGGACAGGGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332324.5
ENST00000645871.1
CDS-3UTR CAA 90 bp GGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACTCAGCCTGGTGGAGGAAGGGAAGCGTCTCCGTCCTTGTaGGGGGCCGGGGCTGGCGCG +
Preference number: 5 (lower is better)
Translates to: GACPVALGFSTQPGGGREASPSL*GAGAGA
Trigger: CGCGCCAGCCCCGGCCCCCAACAAGGACGGAGACGC...TTCCCTTCCTCCACCAGGCTGAGTGGAGAACCCTAAAGCTACGGGACAGGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CAA 90 bp CGGACAGGTGATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGGTCCTGGCCATCCACTaGCTGCTGCCCCGTCGAAGC +
Preference number: 5 (lower is better)
Translates to: RTGDAGRAHCLSARASTLVLAIH*LLPRRS
Trigger: GCTTCGACGGGGCAGCAGCAAGTGGATGGCCAGGAC...CAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATCACCTGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CAA 90 bp CGGACAGGTGATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGCTCTGGCACTCGCCCTaGTGGGTGTGGCCATACCCC +
Preference number: 5 (lower is better)
Translates to: RTGDAGRAHCLSARASTLLWHSP*WVWPYP
Trigger: GGGGTATGGCCACACCCACAAGGGCGAGTGCCAGAG...CAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATCACCTGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CAA 90 bp AGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCTGGCTGCCTGGGGGTCTCTGGTaGTCACAGGACCACCAGGAA +
Preference number: 5 (lower is better)
Translates to: RGAPTSWRAAESHQPTWLPGGLW*SQDHQE
Trigger: TTCCTGGTGGTCCTGTGACAACCAGAGACCCCCAGG...CAGCCAGGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CAA 90 bp TGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGAGGGTGGGCGCCTCACCTaGGCCCTGGGGGTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: WSPLPANPGPTSSQAEAEGGRLT*ALGVSG
Trigger: ACCAGAGACCCCCAGGGCCAAGGTGAGGCGCCCACC...CTCAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS CCA 90 bp AGCCGGAGGCCATGCCCGTGGCTGGCCCGAGACAGATGGGCAGGGTaGGATGGGGGCGCACCTGGAGTGATAGACTCAACCAGTAAGACC +
Preference number: 5 (lower is better)
Translates to: SRRPCPWLARDRWAG*DGGAPGVIDSTSKT
Trigger: GGTCTTACTGGTTGAGTCTATCACTCCAGGTGCGCCCCCATCCCACCCTGCCCATCTGTCTCGGGCCAGCCACGGGCATGGCCTCCGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525371.1
ENST00000642490.1
CDS-3UTR CAA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCAGAATGGTGGCCAGGTaGGCCACGTGCAGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLRMVAR*ATCSSS
Trigger: ACTGCTGCTGCACGTGGCCAACCTGGCCACCATTCT...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CAA 90 bp CTTCCCAAGGTGTTCGCACTCGGACAGGTGATGCGGGGCGGGCACACTGTCTTTGGTGGGCGCCTCACCTaGGCCCTGGGGGTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: LPKVFALGQVMRGGHTVFGGRLT*ALGVSG
Trigger: ACCAGAGACCCCCAGGGCCAAGGTGAGGCGCCCACC...AAAGACAGTGTGCCCGCCCCGCATCACCTGTCCGAGTGCGAACACCTTGGGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CAA 90 bp GACACCCTCGGACCCGGGGCAGGGTCAGCAAGACTCCCAGCTGGCATCAGACTGGGGGAAGACGGATGCTaGCAGCTAGCTCCGTGCCTG +
Preference number: 5 (lower is better)
Translates to: DTLGPGAGSARLPAGIRLGEDGC*QLAPCL
Trigger: CAGGCACGGAGCTAGCTGCAAGCATCCGTCTTCCCC...CAGTCTGATGCCAGCTGGGAGTCTTGCTGACCCTGCCCCGGGTCCGAGGGTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS GCA 90 bp TCTGGCAGCGGGTGTGAGGTGGCAGTGAGAAGCCAGGCCCTCAGGTaGAGCTCAGGCCTCTGCCGCTGGGGCCTCATAGTTGAGCACGTA +
Preference number: 5 (lower is better)
Translates to: SGSGCEVAVRSQALR*SSGLCRWGLIVEHV
Trigger: TACGTGCTCAACTATGAGGCCCCAGCGGCAGAGGCCTGAGCTGCACCTGAGGGCCTGGCTTCTCACTGCCACCTCACACCCGCTGCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332324.5
ENST00000524965.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
ENST00000646692.1
CDS CCA 90 bp CCAGTAAGACCACAGCCGCTGGGAAACACAGAATGGTGGCCAGGTTaGCCACGTGCAGCAGCAGTCCCGCCTGCTCCGTCAGGGCACCCA +
Preference number: 5 (lower is better)
Translates to: PVRPQPLGNTEWWPG*PRAAAVPPAPSGHP
Trigger: TGGGTGCCCTGACGGAGCAGGCGGGACTGCTGCTGCACGTGGCCAACCTGGCCACCATTCTGTGTTTCCCAGCGGCTGTGGTCTTACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000332324.5
ENST00000524965.5
ENST00000525371.1
ENST00000528718.6
ENST00000531896.5
ENST00000642490.1
ENST00000644790.2
ENST00000645798.1
ENST00000645871.1
ENST00000646692.1
CDS CCA 90 bp CCAGGTACTCGTGGAAGAAGGCCGAGGCCAGGAACACCCCTGTCCTaGCCATCCACTTGCTGCTGCCCCGTCGAAGCATGGGCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: PGTRGRRPRPGTPLS*PSTCCCPVEAWAAL
Trigger: CAAGGCTGCCCATGCTTCGACGGGGCAGCAGCAAGTGGATGGCCAGGACAGGGGTGTTCCTGGCCTCGGCCTTCTTCCACGAGTACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332324.5
ENST00000645871.1
CDS-3UTR CAA 90 bp CAGCAACAGTTTGTTCTCGAGCTCCACTGGCCAACTGATAGGGAGAGGCACAGGGCGTCTCCGTCCTTGTaGGGGGCCGGGGCTGGCGCG +
Preference number: 5 (lower is better)
Translates to: QQQFVLELHWPTDRERHRASPSL*GAGAGA
Trigger: CGCGCCAGCCCCGGCCCCCAACAAGGACGGAGACGC...CCTGTGCCTCTCCCTATCAGTTGGCCAGTGGAGCTCGAGAACAAACTGTTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CAA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGAGAATGGTGGCCAGGTaGGCCACGTGCAGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGRMVAR*ATCSSS
Trigger: ACTGCTGCTGCACGTGGCCAACCTGGCCACCATTCT...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CAA 90 bp GGCGCCTCACCTTGGCCCTGGGGGTCTCTGGTTGTCACAGGACCACCAGGAACCCTGGACAGCACTTTATaGACACCCTCGGACCCGGGG +
Preference number: 5 (lower is better)
Translates to: GASPWPWGSLVVTGPPGTLDSTL*TPSDPG
Trigger: CCCCGGGTCCGAGGGTGTCAATAAAGTGCTGTCCAG...GGTTCCTGGTGGTCCTGTGACAACCAGAGACCCCCAGGGCCAAGGTGAGGCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CAA 90 bp GGGATCAGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCGGGCCTGGTCCAGTCTaGGGGTCTTTAATCAAGCAG +
Preference number: 5 (lower is better)
Translates to: GIRGAPTSWRAAESHQPTGPGPV*GSLIKQ
Trigger: CTGCTTGATTAAAGACCCCAAGACTGGACCAGGCCC...GGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCTGATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CAA 90 bp AGGGGTGCCCCAACCTCGTGGAGGGCAGCTGAGAGCCACCAGCCCACCTGGCTGCAAACACCTGCCTTGTaGGGCCATAGCTGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RGAPTSWRAAESHQPTWLQTPAL*GHSCRS
Trigger: AGACCTGCAGCTATGGCCCAACAAGGCAGGTGTTTG...CAGCCAGGTGGGCTGGTGGCTCTCAGCTGCCCTCCACGAGGTTGGGGCACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CAA 90 bp GGCCAGAGTGCCGATTCCCGCACACCCAGCAGGAGTAGCACCAGGAGAGGACGCCCTGGGGGTCTCTGGTaGTCACAGGACCACCAGGAA +
Preference number: 5 (lower is better)
Translates to: GQSADSRTPSRSSTRRGRPGGLW*SQDHQE
Trigger: TTCCTGGTGGTCCTGTGACAACCAGAGACCCCCAGG...GCGTCCTCTCCTGGTGCTACTCCTGCTGGGTGTGCGGGAATCGGCACTCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS TCA 90 bp CCCCGTCGAAGCATGGGCAGCCTTGGCCCTGGCCCTGCGGCACCATaGGTTGACGTCGCGGTAGGAGAAGAGCTTGAGGAAGAGGATGGT +
Preference number: 5 (lower is better)
Translates to: PRRSMGSLGPGPAAP*VDVAVGEELEEEDG
Trigger: ACCATCCTCTTCCTCAAGCTCTTCTCCTACCGCGACGTCAACTCATGGTGCCGCAGGGCCAGGGCCAAGGCTGCCCATGCTTCGACGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332324.5
ENST00000645871.1
CDS GCA 90 bp AGGTCAGATTGTCCGGGTAGCTCACGGTGTGCGGGGCAGCAGCACTaGTGGCCTTCTTCCCTGCAGAGGCTACGAGCACAGCAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: RSDCPGSSRCAGQQH*WPSSLQRLRAQQSG
Trigger: CCCACTCTGCTGTGCTCGTAGCCTCTGCAGGGAAGAAGGCCAGCAGTGCTGCTGCCCCGCACACCGTGAGCTACCCGGACAATCTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531896.5
ENST00000645798.1
CDS CCA 90 bp TCAGATTGTCCGGGTAGCTCACGGTGTGCGGGGCAGCAGCACTGCTaGCCTTCTTCCCTGCAGAGGCTACGAGCACAGCAGAGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: SDCPGSSRCAGQQHC*PSSLQRLRAQQSGR
Trigger: CCTCCCACTCTGCTGTGCTCGTAGCCTCTGCAGGGAAGAAGGCCAGCAGTGCTGCTGCCCCGCACACCGTGAGCTACCCGGACAATCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531896.5
ENST00000645798.1
CDS CCA 90 bp CCCGCCTGCTCCGTCAGGGCACCCACCGCCAGGCGCTTCTCAACCTaGAATGCAGCCACAGCAAAGACATTGGCCGCAATAACCAGGCAT +
Preference number: 5 (lower is better)
Translates to: PACSVRAPTARRFST*NAATAKTLAAITRH
Trigger: ATGCCTGGTTATTGCGGCCAATGTCTTTGCTGTGGCTGCATTCCAGGTTGAGAAGCGCCTGGCGGTGGGTGCCCTGACGGAGCAGGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332324.5
ENST00000525371.1
ENST00000528718.6
ENST00000531896.5
ENST00000642490.1
ENST00000644790.2
ENST00000645798.1
ENST00000645871.1
CDS CCA 90 bp CCAGGTACTCGTGGAAGAAGGCCGAGGCCAGGAACACCCCTGTCCTaGCCATCCACTTGCTGCTGCCCCGTCGAAGCATGGGCTTGTAGA +
Preference number: 5 (lower is better)
Translates to: PGTRGRRPRPGTPLS*PSTCCCPVEAWACR
Trigger: TCTACAAGCCCATGCTTCGACGGGGCAGCAGCAAGTGGATGGCCAGGACAGGGGTGTTCCTGGCCTCGGCCTTCTTCCACGAGTACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000524965.5
ENST00000527885.1
ENST00000528718.6
ENST00000644790.2
ENST00000646256.1
ENST00000646692.1
CDS-3UTR CAA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCGCCACAGCAAAGACATaGGCCGCAATAACCAGGCAT +
Preference number: 5 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLATAKT*AAITRH
Trigger: ATGCCTGGTTATTGCGGCCAATGTCTTTGCTGTGGC...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CAA 90 bp TGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGAGAGAATGGTGGCCAGGTaGGCCACGTGCAGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: WSPLPANPGPTSSQAEAERMVAR*ATCSSS
Trigger: ACTGCTGCTGCACGTGGCCAACCTGGCCACCATTCT...CTCAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CAA 90 bp GGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACTCAGCCTGGTGGAGGAAGGGAACTCTGGCACTCGCCCTaGTGGGTGTGGCCATACCCC +
Preference number: 5 (lower is better)
Translates to: GACPVALGFSTQPGGGRELWHSP*WVWPYP
Trigger: GGGGTATGGCCACACCCACAAGGGCGAGTGCCAGAG...TTCCCTTCCTCCACCAGGCTGAGTGGAGAACCCTAAAGCTACGGGACAGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CAA 90 bp GGCCAGAGTGCCGATTCCCGCACACCCAGCAGGAGTAGCACCAGGAGAGGACGCGGGCCTGGTCCAGTCTaGGGGTCTTTAATCAAGCAG +
Preference number: 5 (lower is better)
Translates to: GQSADSRTPSRSSTRRGRGPGPV*GSLIKQ
Trigger: CTGCTTGATTAAAGACCCCAAGACTGGACCAGGCCC...GCGTCCTCTCCTGGTGCTACTCCTGCTGGGTGTGCGGGAATCGGCACTCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CAA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCAAACACCTGCCTTGTaGGGCCATAGCTGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGQTPAL*GHSCRS
Trigger: AGACCTGCAGCTATGGCCCAACAAGGCAGGTGTTTG...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CAA 90 bp GACACCCTCGGACCCGGGGCAGGGTCAGCAAGACTCCCAGCTGGCATCAGACTGGCAGTGGAGCAGGCTTaGCTGCTTTATCTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: DTLGPGAGSARLPAGIRLAVEQA*LLYLAA
Trigger: TGCTGCCAGATAAAGCAGCAAAGCCTGCTCCACTGC...CAGTCTGATGCCAGCTGGGAGTCTTGCTGACCCTGCCCCGGGTCCGAGGGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CAA 90 bp GGCCAGAGTGCCGATTCCCGCACACCCAGCAGGAGTAGCACCAGGAGAGGACGCGCAGTGGAGCAGGCTTaGCTGCTTTATCTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: GQSADSRTPSRSSTRRGRAVEQA*LLYLAA
Trigger: TGCTGCCAGATAAAGCAGCAAAGCCTGCTCCACTGC...GCGTCCTCTCCTGGTGCTACTCCTGCTGGGTGTGCGGGAATCGGCACTCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CAA 90 bp ATGCTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGGCCACAGCAAAGACATaGGCCGCAATAACCAGGCAT +
Preference number: 5 (lower is better)
Translates to: MLCSQAHPQHSRPRRRGGATAKT*AAITRH
Trigger: ATGCCTGGTTATTGCGGCCAATGTCTTTGCTGTGGC...CCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CAA 90 bp GGCCAGAGTGCCGATTCCCGCACACCCAGCAGGAGTAGCACCAGGAGAGGACGCGCCACAGCAAAGACATaGGCCGCAATAACCAGGCAT +
Preference number: 5 (lower is better)
Translates to: GQSADSRTPSRSSTRRGRATAKT*AAITRH
Trigger: ATGCCTGGTTATTGCGGCCAATGTCTTTGCTGTGGC...GCGTCCTCTCCTGGTGCTACTCCTGCTGGGTGTGCGGGAATCGGCACTCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CAA 90 bp GGCGCCTCACCTTGGCCCTGGGGGTCTCTGGTTGTCACAGGACCACCAGGAACCTGTCTGATGCACCACTaGTGCACAGGGATGTTCCAG +
Preference number: 5 (lower is better)
Translates to: GASPWPWGSLVVTGPPGTCLMHH*CTGMFQ
Trigger: CTGGAACATCCCTGTGCACAAGTGGTGCATCAGACA...GGTTCCTGGTGGTCCTGTGACAACCAGAGACCCCCAGGGCCAAGGTGAGGCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CAA 90 bp CTTCCCAAGGTGTTCGCACTCGGACAGGTGATGCGGGGCGGGCACACTGTCTTTCTGGACAGCACTTTATaGACACCCTCGGACCCGGGG +
Preference number: 5 (lower is better)
Translates to: LPKVFALGQVMRGGHTVFLDSTL*TPSDPG
Trigger: CCCCGGGTCCGAGGGTGTCAATAAAGTGCTGTCCAG...AAAGACAGTGTGCCCGCCCCGCATCACCTGTCCGAGTGCGAACACCTTGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CAA 90 bp TGGAGCCCACTTCCCGCAAACCCAGGGCCGACCTCTTCCCAAGCTGAAGCTGAGCCTCAAACACCTGCCTaGTTGGGCCATAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: WSPLPANPGPTSSQAEAEPQTPA*LGHSCR
Trigger: CCTGCAGCTATGGCCCAACAAGGCAGGTGTTTGAGG...CTCAGCTTCAGCTTGGGAAGAGGTCGGCCCTGGGTTTGCGGGAAGTGGGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CAA 90 bp GATGCGGGGCGGGCACACTGTCTTTCTGCCAGAGCCAGCACCCTGTGTAGGCACTCTGGCAGCAACAGTTaGTTCTCGAGCTCCACTGGC +
Preference number: 5 (lower is better)
Translates to: DAGRAHCLSARASTLCRHSGSNS*FSSSTG
Trigger: GCCAGTGGAGCTCGAGAACAAACTGTTGCTGCCAGA...GTGCCTACACAGGGTGCTGGCTCTGGCAGAAAGACAGTGTGCCCGCCCCGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS TCA 90 bp TGCGCCACCTGTCCGCACTCACCGCCAGCTTCAGGAGGCGCTCGATaGTGCGTGAGTAGTCCATGTCCTGCAGAAACAAGCCCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: CATCPHSPPASGGAR*CVSSPCPAETSPSA
Trigger: AGCTGAAGGGCTTGTTTCTGCAGGACATGGACTACTCACGCATCATCGAGCGCCTCCTGAAGCTGGCGGTGAGTGCGGACAGGTGGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527885.1
ENST00000646256.1
CDS GCA 90 bp GAGGACGGCTATTGGCTGTCCGATGATGAGCGACAGCCACACAGCTaGGTTGCCATAGTTGCCCTGGAAAAAGCGGCCCACGAACCAGGC +
Preference number: 5 (lower is better)
Translates to: EDGYWLSDDERQPHS*VAIVALEKAAHEPG
Trigger: GCCTGGTTCGTGGGCCGCTTTTTCCAGGGCAACTATGGCAACGCAGCTGTGTGGCTGTCGCTCATCATCGGACAGCCAATAGCCGTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000332324.5
ENST00000524965.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
ENST00000646692.1
CDS-3UTR CAA 90 bp CTGTGCAGCCAGGCCCATCCCCAGCACTCGAGGCCTAGGAGGAGAGGTGGGCTCAGAAATAACCGGGCATaGCTCAAGATCAGCATCACC +
Preference number: 5 (lower is better)
Translates to: LCSQAHPQHSRPRRRGGLRNNRA*LKISIT
Trigger: GGTGATGCTGATCTTGAGCAATGCCCGGTTATTTCT...GAGCCCACCTCTCCTCCTAGGCCTCGAGTGCTGGGGATGGGCCTGGCTGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332324.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
CDS-3UTR CAA 90 bp CCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACTCTGGCAGCAACAGTTaGTTCTCGAGCTCCACTGGC +
Preference number: 5 (lower is better)
Translates to: PCVGTGNGSLSRSFRVLHSGSNS*FSSSTG
Trigger: GCCAGTGGAGCTCGAGAACAAACTGTTGCTGCCAGA...GTGGAGAACCCTAAAGCTACGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS TCA 90 bp CCTGTCCGCACTCACCGCCAGCTTCAGGAGGCGCTCGATGATGCGTaGGTAGTCCATGTCCTGCAGAAACAAGCCCTTCAGCTAGCCATG +
Preference number: 5 (lower is better)
Translates to: PVRTHRQLQEALDDA*VVHVLQKQALQLAM
Trigger: CATGGCTAGCTGAAGGGCTTGTTTCTGCAGGACATGGACTACTCACGCATCATCGAGCGCCTCCTGAAGCTGGCGGTGAGTGCGGACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527885.1
ENST00000646256.1
CDS-3UTR CAA 90 bp CCCTGTGTAGGCACGGGGAACGGGAGCCTGTCCCGTAGCTTTAGGGTTCTCCACTGTCTGATGCACCACTaGTGCACAGGGATGTTCCAG +
Preference number: 5 (lower is better)
Translates to: PCVGTGNGSLSRSFRVLHCLMHH*CTGMFQ
Trigger: CTGGAACATCCCTGTGCACAAGTGGTGCATCAGACA...GTGGAGAACCCTAAAGCTACGGGACAGGCTCCCGTTCCCCGTGCCTACACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CAA 90 bp GGCGCCTCACCTTGGCCCTGGGGGTCTCTGGTTGTCACAGGACCACCAGGAACCAGGACCAGCATGTGCTaGCAGTTCTTTATTGAGGGA +
Preference number: 5 (lower is better)
Translates to: GASPWPWGSLVVTGPPGTRTSMC*QFFIEG
Trigger: TCCCTCAATAAAGAACTGCAAGCACATGCTGGTCCT...GGTTCCTGGTGGTCCTGTGACAACCAGAGACCCCCAGGGCCAAGGTGAGGCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS GCA 90 bp TCCACTTGCTGCTGCCCCGTCGAAGCATGGGCTTGTAGAAGTGTCTaGAGAGGAGGGGGCATGGAAAGCGGTTCAGGTTCACAGCCATGT +
Preference number: 5 (lower is better)
Translates to: STCCCPVEAWACRSV*RGGGMESGSGSQPC
Trigger: ACATGGCTGTGAACCTGAACCGCTTTCCATGCCCCCTCCTCTGCAGACACTTCTACAAGCCCATGCTTCGACGGGGCAGCAGCAAGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000524965.5
ENST00000527885.1
ENST00000646256.1
ENST00000646692.1
CDS-3UTR CAA 90 bp CTTCCCAAGGTGTTCGCACTCGGACAGGTGATGCGGGGCGGGCACACTGTCTTTGCCACAGCAAAGACATaGGCCGCAATAACCAGGCAT +
Preference number: 5 (lower is better)
Translates to: LPKVFALGQVMRGGHTVFATAKT*AAITRH
Trigger: ATGCCTGGTTATTGCGGCCAATGTCTTTGCTGTGGC...AAAGACAGTGTGCCCGCCCCGCATCACCTGTCCGAGTGCGAACACCTTGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS CCA 90 bp ATAGTTGAGCACGTAGTAGTCGTGGACGTACATGAGGACGGCTATTaGCTGTCCGATGATGAGCGACAGCCACACAGCTGCGTTGCCATA +
Preference number: 5 (lower is better)
Translates to: IVEHVVVVDVHEDGY*LSDDERQPHSCVAI
Trigger: TATGGCAACGCAGCTGTGTGGCTGTCGCTCATCATCGGACAGCCAATAGCCGTCCTCATGTACGTCCACGACTACTACGTGCTCAACTAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332324.5
ENST00000524965.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
ENST00000646692.1
CDS-3UTR CAA 90 bp GCCCCATCTATCCAGCTTGGTGGATTGCAGGGCCTGGGAACAAGGTGTCCTGAAAGAAATAACCGGGCATaGCTCAAGATCAGCATCACC +
Preference number: 5 (lower is better)
Translates to: APSIQLGGLQGLGTRCPERNNRA*LKISIT
Trigger: GGTGATGCTGATCTTGAGCAATGCCCGGTTATTTCT...TTCAGGACACCTTGTTCCCAGGCCCTGCAATCCACCAAGCTGGATAGATGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS-3UTR CAA 90 bp AGATCTATAAACAGACAGGCTCTATGCTATGGCCTCCATGTGTTTCCTCTGTCCGGGGAAGACGGATGCTaGCAGCTAGCTCCGTGCCTG +
Preference number: 5 (lower is better)
Translates to: RSINRQALCYGLHVFPLSGEDGC*QLAPCL
Trigger: CAGGCACGGAGCTAGCTGCAAGCATCCGTCTTCCCC...GGACAGAGGAAACACATGGAGGCCATAGCATAGAGCCTGTCTGTTTATAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS TCA 90 bp TTCACAGCCATGTTCCACATCACACACACACACACCCCACCTACCTaGTGCACCACTTGTGCACAGGGATGTTCCAGTTCTGCCAGAAGT +
Preference number: 5 (lower is better)
Translates to: FTAMFHITHTHTPPT*CTTCAQGCSSSARS
Trigger: ACTTCTGGCAGAACTGGAACATCCCTGTGCACAAGTGGTGCATCAGGTAGGTGGGGTGTGTGTGTGTGTGATGTGGAACATGGCTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000524965.5
ENST00000527885.1
ENST00000646256.1
ENST00000646692.1
CDS-3UTR CAA 90 bp AGATCTATAAACAGACAGGCTCTATGCTATGGCCTCCATGTGTTTCCTCTGTCCAGGACCAGCATGTGCTaGCAGTTCTTTATTGAGGGA +
Preference number: 5 (lower is better)
Translates to: RSINRQALCYGLHVFPLSRTSMC*QFFIEG
Trigger: TCCCTCAATAAAGAACTGCAAGCACATGCTGGTCCT...GGACAGAGGAAACACATGGAGGCCATAGCATAGAGCCTGTCTGTTTATAGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528718.6
ENST00000644790.2
CDS GCA 72 bp CCTGCAGGCGATGGCACCTCAGCTCCCAGTGGCCGCTaGCCACGCCGGCGTCTCCGTCCTTGTTGGGGGCCG +
Preference number: 6 (lower is better)
Translates to: PAGDGTSAPSGR*PRRRLRPCWGP
Trigger: CGGCCCCCAACAAGGACGGAGACGCCGGCGTGGGCAGCGGCCACTGGGAGCTGAGGTGCCATCGCCTGCAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000332324.5
ENST00000525371.1
ENST00000528718.6
ENST00000531896.5
ENST00000642490.1
ENST00000644790.2
ENST00000645798.1
ENST00000645871.1
CDS CCA 72 bp CTCCACAGCGCCACAGCCGGAGGCCATGCCCGTGGCTaGCCCGAGACAGATGGGCAGGGTGGGATGGGGGCG +
Preference number: 6 (lower is better)
Translates to: LHSATAGGHARG*PETDGQGGMGA
Trigger: CGCCCCCATCCCACCCTGCCCATCTGTCTCGGGCCAGCCACGGGCATGGCCTCCGGCTGTGGCGCTGTGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525371.1
ENST00000642490.1
CDS GCA 72 bp GGACTCAGGCCTCCACAGCGCCACAGCCGGAGGCCATaGCCGTGGCTGGCCCGAGACAGATGGGCAGGGTGG +
Preference number: 6 (lower is better)
Translates to: GLRPPQRHSRRP*PWLARDRWAGW
Trigger: CCACCCTGCCCATCTGTCTCGGGCCAGCCACGGGCATGGCCTCCGGCTGTGGCGCTGTGGAGGCCTGAGTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525371.1
ENST00000642490.1
CDS CCA 72 bp AGGCCTCCACAGCGCCACAGCCGGAGGCCATGCCCGTaGCTGGCCCGAGACAGATGGGCAGGGTGGGATGGG +
Preference number: 6 (lower is better)
Translates to: RPPQRHSRRPCP*LARDRWAGWDG
Trigger: CCCATCCCACCCTGCCCATCTGTCTCGGGCCAGCCACGGGCATGGCCTCCGGCTGTGGCGCTGTGGAGGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525371.1
ENST00000642490.1
CDS GCA 72 bp GCCCGCGTCGGGCCCGTCGGCCTCAAGGACAACGGCTaGGTTGCTCCGGAGCCGCTAACTAATGGACGGCCG +
Preference number: 6 (lower is better)
Translates to: ARVGPVGLKDNG*VAPEPLTNGRP
Trigger: CGGCCGTCCATTAGTTAGCGGCTCCGGAGCAACGCAGCCGTTGTCCTTGAGGCCGACGGGCCCGACGCGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332324.5
ENST00000645871.1
CDS GCA 72 bp GTGGCCAGGTTGGCCACGTGCAGCAGCAGTCCCGCCTaGTCCGTCAGGGCACCCACCGCCAGGCGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: VARLATCSSSPA*SVRAPTARRFS
Trigger: TGAGAAGCGCCTGGCGGTGGGTGCCCTGACGGAGCAGGCGGGACTGCTGCTGCACGTGGCCAACCTGGCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000332324.5
ENST00000524965.5
ENST00000525371.1
ENST00000528718.6
ENST00000531896.5
ENST00000642490.1
ENST00000644790.2
ENST00000645798.1
ENST00000645871.1
ENST00000646692.1
CDS CCA 72 bp AGCCGGAGGCCATGCCCGTGGCTGGCCCGAGACAGATaGGCAGGGTGGGATGGGGGCGCACCTGGAGTGATA +
Preference number: 6 (lower is better)
Translates to: SRRPCPWLARDR*AGWDGGAPGVI
Trigger: TATCACTCCAGGTGCGCCCCCATCCCACCCTGCCCATCTGTCTCGGGCCAGCCACGGGCATGGCCTCCGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525371.1
ENST00000642490.1
CDS GCA 72 bp CCAGGAACACCCCTGTCCTGGCCATCCACTTGCTGCTaGCCCGTCGAAGCATGGGCAGCCTTGGCCCTGGCC +
Preference number: 6 (lower is better)
Translates to: PGTPLSWPSTCC*PVEAWAALALA
Trigger: GGCCAGGGCCAAGGCTGCCCATGCTTCGACGGGGCAGCAGCAAGTGGATGGCCAGGACAGGGGTGTTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332324.5
ENST00000645871.1
CDS CCA 72 bp TCCTGGCCATCCACTTGCTGCTGCCCCGTCGAAGCATaGGCAGCCTTGGCCCTGGCCCTGCGGCACCATGAG +
Preference number: 6 (lower is better)
Translates to: SWPSTCCCPVEA*AALALALRHHE
Trigger: CTCATGGTGCCGCAGGGCCAGGGCCAAGGCTGCCCATGCTTCGACGGGGCAGCAGCAAGTGGATGGCCAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332324.5
ENST00000645871.1
CDS GCA 72 bp AGGCCAGGAACACCCCTGTCCTGGCCATCCACTTGCTaGTGCCCCGTCGAAGCATGGGCAGCCTTGGCCCTG +
Preference number: 6 (lower is better)
Translates to: RPGTPLSWPSTC*CPVEAWAALAL
Trigger: CAGGGCCAAGGCTGCCCATGCTTCGACGGGGCAGCAGCAAGTGGATGGCCAGGACAGGGGTGTTCCTGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332324.5
ENST00000645871.1
CDS CCA 72 bp CCGGGTAGCTCACGGTGTGCGGGGCAGCAGCACTGCTaGCCTTCTTCCCTGCAGAGGCTACGAGCACAGCAG +
Preference number: 6 (lower is better)
Translates to: PGSSRCAGQQHC*PSSLQRLRAQQ
Trigger: CTGCTGTGCTCGTAGCCTCTGCAGGGAAGAAGGCCAGCAGTGCTGCTGCCCCGCACACCGTGAGCTACCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531896.5
ENST00000645798.1
CDS CAA 72 bp TCCACTTGCTGCTGCCCCGTCGAAGCATGGGCAGCCTaGGCCCTGGCCCTGCGGCACCATGAGTTGACGTCG +
Preference number: 6 (lower is better)
Translates to: STCCCPVEAWAA*ALALRHHELTS
Trigger: CGACGTCAACTCATGGTGCCGCAGGGCCAGGGCCAAGGCTGCCCATGCTTCGACGGGGCAGCAGCAAGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332324.5
ENST00000645871.1
CDS GCA 72 bp TGTCCGGGTAGCTCACGGTGTGCGGGGCAGCAGCACTaGTGGCCTTCTTCCCTGCAGAGGCTACGAGCACAG +
Preference number: 6 (lower is better)
Translates to: CPGSSRCAGQQH*WPSSLQRLRAQ
Trigger: CTGTGCTCGTAGCCTCTGCAGGGAAGAAGGCCAGCAGTGCTGCTGCCCCGCACACCGTGAGCTACCCGGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531896.5
ENST00000645798.1
CDS CAA 90 bp ACCAGTAAGACCACAGCCGCTGGGAAACACAGAATGGTGGCCAGGTaGGCCACGTGCAGCAGCAGTCCCGCCTGCTCCGTCAGGGCACCC +
Preference number: 6 (lower is better)
Translates to: TSKTTAAGKHRMVAR*ATCSSSPACSVRAP
Trigger: GGGTGCCCTGACGGAGCAGGCGGGACTGCTGCTGCACGTGGCCAACCTGGCCACCATTCTGTGTTTCCCAGCGGCTGTGGTCTTACTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000332324.5
ENST00000524965.5
ENST00000525371.1
ENST00000528718.6
ENST00000531896.5
ENST00000642490.1
ENST00000644790.2
ENST00000645798.1
ENST00000645871.1
ENST00000646692.1
CDS TCA 72 bp CGAACCAGGCCAGTGGGATCTGAGCCATCATGCCCGTaGACGCCCAGAGGCGGAACATTCGCAGAGGGACGC +
Preference number: 6 (lower is better)
Translates to: RTRPVGSEPSCP*TPRGGTFAEGR
Trigger: GCGTCCCTCTGCGAATGTTCCGCCTCTGGGCGTTCACGGGCATGATGGCTCAGATCCCACTGGCCTGGTTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332324.5
ENST00000524965.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
ENST00000646692.1
CDS CCA 72 bp CCAGTAAGACCACAGCCGCTGGGAAACACAGAATGGTaGCCAGGTTGGCCACGTGCAGCAGCAGTCCCGCCT +
Preference number: 6 (lower is better)
Translates to: PVRPQPLGNTEW*PGWPRAAAVPP
Trigger: AGGCGGGACTGCTGCTGCACGTGGCCAACCTGGCCACCATTCTGTGTTTCCCAGCGGCTGTGGTCTTACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000332324.5
ENST00000524965.5
ENST00000525371.1
ENST00000528718.6
ENST00000531896.5
ENST00000642490.1
ENST00000644790.2
ENST00000645798.1
ENST00000645871.1
ENST00000646692.1
CDS GCA 72 bp AGGCCAGGAACACCCCTGTCCTGGCCATCCACTTGCTaGTGCCCCGTCGAAGCATGGGCTTGTAGAAGTGTC +
Preference number: 6 (lower is better)
Translates to: RPGTPLSWPSTC*CPVEAWACRSV
Trigger: GACACTTCTACAAGCCCATGCTTCGACGGGGCAGCAGCAAGTGGATGGCCAGGACAGGGGTGTTCCTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000524965.5
ENST00000527885.1
ENST00000528718.6
ENST00000644790.2
ENST00000646256.1
ENST00000646692.1
CDS GCA 72 bp CCAGGAACACCCCTGTCCTGGCCATCCACTTGCTGCTaGCCCGTCGAAGCATGGGCTTGTAGAAGTGTCTGC +
Preference number: 6 (lower is better)
Translates to: PGTPLSWPSTCC*PVEAWACRSVC
Trigger: GCAGACACTTCTACAAGCCCATGCTTCGACGGGGCAGCAGCAAGTGGATGGCCAGGACAGGGGTGTTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000524965.5
ENST00000527885.1
ENST00000646256.1
ENST00000646692.1
CDS CCA 72 bp TCCTGGCCATCCACTTGCTGCTGCCCCGTCGAAGCATaGGCTTGTAGAAGTGTCTGCAGAGGAGGGGGCATG +
Preference number: 6 (lower is better)
Translates to: SWPSTCCCPVEA*ACRSVCRGGGM
Trigger: CATGCCCCCTCCTCTGCAGACACTTCTACAAGCCCATGCTTCGACGGGGCAGCAGCAAGTGGATGGCCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000524965.5
ENST00000527885.1
ENST00000646256.1
ENST00000646692.1
CDS CCA 72 bp TCCGTCAGGGCACCCACCGCCAGGCGCTTCTCAACCTaGAATGCAGCCACAGCAAAGACATTGGCCGCAATA +
Preference number: 6 (lower is better)
Translates to: SVRAPTARRFST*NAATAKTLAAI
Trigger: TATTGCGGCCAATGTCTTTGCTGTGGCTGCATTCCAGGTTGAGAAGCGCCTGGCGGTGGGTGCCCTGACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332324.5
ENST00000525371.1
ENST00000528718.6
ENST00000531896.5
ENST00000642490.1
ENST00000644790.2
ENST00000645798.1
ENST00000645871.1
CDS TCA 72 bp GGGGACCGCCAGCTTCAGGAGGCGCTCGATGATGCGTaGGTAGTCCATGTCCTTGAAGGGCTTCATGGAGTT +
Preference number: 6 (lower is better)
Translates to: GDRQLQEALDDA*VVHVLEGLHGV
Trigger: AACTCCATGAAGCCCTTCAAGGACATGGACTACTCACGCATCATCGAGCGCCTCCTGAAGCTGGCGGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000524965.5
ENST00000528718.6
ENST00000644790.2
ENST00000646692.1
CDS TCA 72 bp TGTCCGCACTCACCGCCAGCTTCAGGAGGCGCTCGATaGTGCGTGAGTAGTCCATGTCCTGCAGAAACAAGC +
Preference number: 6 (lower is better)
Translates to: CPHSPPASGGAR*CVSSPCPAETS
Trigger: GCTTGTTTCTGCAGGACATGGACTACTCACGCATCATCGAGCGCCTCCTGAAGCTGGCGGTGAGTGCGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527885.1
ENST00000646256.1
CDS GCA 72 bp TGCTGCCCCGTCGAAGCATGGGCTTGTAGAAGTGTCTaGAGAGGAGGGGGCATGGAAAGCGGTTCAGGTTCA +
Preference number: 6 (lower is better)
Translates to: CCPVEAWACRSV*RGGGMESGSGS
Trigger: TGAACCTGAACCGCTTTCCATGCCCCCTCCTCTGCAGACACTTCTACAAGCCCATGCTTCGACGGGGCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000524965.5
ENST00000527885.1
ENST00000646256.1
ENST00000646692.1
CDS CCA 72 bp ATGGTGGGGACCATCCACTGCTGGATCAGCCCCACCTaGAGCTGGGTGAAGAACAGCATCTCAAGGATCCGT +
Preference number: 6 (lower is better)
Translates to: MVGTIHCWISPT*SWVKNSISRIR
Trigger: ACGGATCCTTGAGATGCTGTTCTTCACCCAGCTCCAGGTGGGGCTGATCCAGCAGTGGATGGTCCCCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000524844.1
ENST00000524965.5
ENST00000528718.6
ENST00000643032.1
ENST00000644790.2
ENST00000646692.1
CDS TCA 72 bp ACTCACCGCCAGCTTCAGGAGGCGCTCGATGATGCGTaGGTAGTCCATGTCCTGCAGAAACAAGCCCTTCAG +
Preference number: 6 (lower is better)
Translates to: THRQLQEALDDA*VVHVLQKQALQ
Trigger: CTGAAGGGCTTGTTTCTGCAGGACATGGACTACTCACGCATCATCGAGCGCCTCCTGAAGCTGGCGGTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527885.1
ENST00000646256.1
CDS GCA 72 bp TTGCTGAAGCCACTGTCAGAGCTGAATAAAGAATCCTaGAGGCGATGGCACCTCAGCTCCCAGTGGCCGCTG +
Preference number: 6 (lower is better)
Translates to: LLKPLSELNKES*RRWHLSSQWPL
Trigger: CAGCGGCCACTGGGAGCTGAGGTGCCATCGCCTGCAGGATTCTTTATTCAGCTCTGACAGTGGCTTCAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332324.5
ENST00000525371.1
ENST00000528718.6
ENST00000531896.5
ENST00000642490.1
ENST00000644790.2
ENST00000645798.1
ENST00000645871.1
CDS GCA 72 bp TATTGGCTGTCCGATGATGAGCGACAGCCACACAGCTaGGTTGCCATAGTTGCCCTGGAAAAAGCGGCCCAC +
Preference number: 6 (lower is better)
Translates to: YWLSDDERQPHS*VAIVALEKAAH
Trigger: GTGGGCCGCTTTTTCCAGGGCAACTATGGCAACGCAGCTGTGTGGCTGTCGCTCATCATCGGACAGCCAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000332324.5
ENST00000524965.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
ENST00000646692.1
CDS CCA 72 bp AGCCACAGCAAAGACATTGGCCGCAATAACCAGGCATaGGGCGGGCCAGCTATAGGGATCCTTCAGGAACAG +
Preference number: 6 (lower is better)
Translates to: SHSKDIGRNNQA*GGPAIGILQEQ
Trigger: CTGTTCCTGAAGGATCCCTATAGCTGGCCCGCCCCATGCCTGGTTATTGCGGCCAATGTCTTTGCTGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332324.5
ENST00000525371.1
ENST00000528718.6
ENST00000531896.5
ENST00000642490.1
ENST00000644790.2
ENST00000645798.1
ENST00000645871.1
CDS CCA 72 bp CACGTAGTAGTCGTGGACGTACATGAGGACGGCTATTaGCTGTCCGATGATGAGCGACAGCCACACAGCTGC +
Preference number: 6 (lower is better)
Translates to: HVVVVDVHEDGY*LSDDERQPHSC
Trigger: GCAGCTGTGTGGCTGTCGCTCATCATCGGACAGCCAATAGCCGTCCTCATGTACGTCCACGACTACTACGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332324.5
ENST00000524965.5
ENST00000528718.6
ENST00000644790.2
ENST00000645871.1
ENST00000646692.1
CDS TCA 72 bp AAGTGTCGCCAGCTTCAGGAGGCGCTCGATGATGCGTaGGTAGTCCATGTCCTTGAAGGGCTTCATGGAGTT +
Preference number: 6 (lower is better)
Translates to: KCRQLQEALDDA*VVHVLEGLHGV
Trigger: AACTCCATGAAGCCCTTCAAGGACATGGACTACTCACGCATCATCGAGCGCCTCCTGAAGCTGGCGACACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524844.1
ENST00000643032.1
CDS TCA 72 bp TGTGCACAGGGATGTTCCAGTTCTGCCAGAAGTAGGTaGCAGACTCGGAGTTCCACCAGTCCCGGTAGAACT +
Preference number: 6 (lower is better)
Translates to: CAQGCSSSARSR*QTRSSTSPGRT
Trigger: AGTTCTACCGGGACTGGTGGAACTCCGAGTCTGTCACCTACTTCTGGCAGAACTGGAACATCCCTGTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524965.5
ENST00000527885.1
ENST00000528718.6
ENST00000644790.2
ENST00000646256.1
ENST00000646692.1
CDS TCA 72 bp ATGTTCCACATCACACACACACACACCCCACCTACCTaGTGCACCACTTGTGCACAGGGATGTTCCAGTTCT +
Preference number: 6 (lower is better)
Translates to: MFHITHTHTPPT*CTTCAQGCSSS
Trigger: AGAACTGGAACATCCCTGTGCACAAGTGGTGCATCAGGTAGGTGGGGTGTGTGTGTGTGTGATGTGGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000524965.5
ENST00000527885.1
ENST00000646256.1
ENST00000646692.1