RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DFFB (Homo sapiens)

Ensembl gene IDs: ENSG00000169598

Ensembl transcript IDs: ENST00000338895.7, ENST00000339350.7, ENST00000378206.5, ENST00000378209.8, ENST00000468793.5, ENST00000475969.5, ENST00000477548.5, ENST00000491998.5, ENST00000625756.2

Found 297 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCGCTGGGCGGCCTGGATaGGCCCCACCTGTGGCTCGT +
Preference number: 2 (lower is better)
Translates to: LIPTDPYDQVLTDIQRVPAGRPG*APPVAR
Trigger: ACGAGCCACAGGTGGGGCTCATCCAGGCCGCCCAGC...GGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000477548.5
3UTR-3UTR CCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGGGCGGCTGCCGCCCTTaGCTCCTCTGTCGAAGTAGC +
Preference number: 2 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWGGCRP*LLCRSS
Trigger: GCTACTTCGACAGAGGAGCCAAGGGCGGCAGCCGCC...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
3UTR-3UTR CCA 90 bp CTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCAGCTGCTGGGCGGCCTaGATGAGCCCCACCTGTGGC +
Preference number: 2 (lower is better)
Translates to: LIPTDPYDQVLTDIQRVPSCWAA*MSPTCG
Trigger: GCCACAGGTGGGGCTCATCCAGGCCGCCCAGCAGCT...GGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000477548.5
3UTR-3UTR TCA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCCGCGATGTTCTGGCTaGCGTTGTGCAGGAGGTCAG +
Preference number: 2 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVPRCSG*RCAGGQ
Trigger: CTGACCTCCTGCACAACGTCAGCCAGAACATCGCGG...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
3UTR-3UTR TCA 90 bp CTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCCCACCTGTGGCTCGTaGAATGCACTGAGGAAGCGC +
Preference number: 2 (lower is better)
Translates to: LIPTDPYDQVLTDIQRVPPTCGS*NALRKR
Trigger: GCGCTTCCTCAGTGCATTTCACGAGCCACAGGTGGG...GGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000477548.5
3UTR-3UTR TCA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATGCTGGGCGGCCTGGATaGGCCCCACCTGTGGCTCGT +
Preference number: 2 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDAGRPG*APPVAR
Trigger: ACGAGCCACAGGTGGGGCTCATCCAGGCCGCCCAGC...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000477548.5
3UTR-3UTR TCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGAGTTCAGGGCTTCAGTaGGCCATGATCCTGCCACTG +
Preference number: 2 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWSSGLQ*AMILPL
Trigger: CAGTGGCAGGATCATGGCTCACTGAAGCCCTGAACT...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491998.5
3UTR-3UTR CCA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCTGCCATTGTACTGCATaGACCGGAGCCTCTGGCACA +
Preference number: 2 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVCHCTA*TGASGT
Trigger: TGTGCCAGAGGCTCCGGTCCATGCAGTACAATGGCA...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
3UTR-3UTR CCA 90 bp CCAGAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCGGCGGCTGCCGCCCTTaGCTCCTCTGTCGAAGTAGC +
Preference number: 2 (lower is better)
Translates to: PETILIPTDPYDQVLTDIGGCRP*LLCRSS
Trigger: GCTACTTCGACAGAGGAGCCAAGGGCGGCAGCCGCC...GATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
3UTR-3UTR CCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGATGTCAAAGGGACCCTaGCAGGAGAACCAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWMSKGP*QENQPS
Trigger: GGAAGGCTGGTTCTCCTGCCAGGGTCCCTTTGACAT...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
3UTR-3UTR CCA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGTGTGTACGTGTCACTaGCGTTTCCGCACAGGCTGC +
Preference number: 2 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRVCTCH*RFRTGC
Trigger: GCAGCCTGTGCGGAAACGCCAGTGACACGTACACAC...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR CCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACGGCGGCTGCCGCCCTTaGCTCCTCTGTCGAAGTAGC +
Preference number: 2 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDGGCRP*LLCRSS
Trigger: GCTACTTCGACAGAGGAGCCAAGGGCGGCAGCCGCC...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
3UTR-3UTR TCA 90 bp CCAGAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCCCACCTGTGGCTCGTaGAATGCACTGAGGAAGCGC +
Preference number: 2 (lower is better)
Translates to: PETILIPTDPYDQVLTDIPTCGS*NALRKR
Trigger: GCGCTTCCTCAGTGCATTTCACGAGCCACAGGTGGG...GATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000477548.5
3UTR-3UTR GCA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGTCGAAGTAGCTaGCATTGTACTGCATGGACC +
Preference number: 2 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVLCRSS*HCTAWT
Trigger: GGTCCATGCAGTACAATGGCAGCTACTTCGACAGAG...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
3UTR-3UTR CCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGCACATCTGCCACCAATaGGACAAACAAAAGGTGCCG +
Preference number: 2 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWHICHQ*DKQKVP
Trigger: CGGCACCTTTTGTTTGTCCCATTGGTGGCAGATGTG...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339350.7
ENST00000378206.5
3UTR-3UTR CCA 90 bp CTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCTGCCATTGTACTGCATaGACCGGAGCCTCTGGCACA +
Preference number: 2 (lower is better)
Translates to: LIPTDPYDQVLTDIQRVPCHCTA*TGASGT
Trigger: TGTGCCAGAGGCTCCGGTCCATGCAGTACAATGGCA...GGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
3UTR-3UTR CCA 90 bp CTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCATGTCAAAGGGACCCTaGCAGGAGAACCAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: LIPTDPYDQVLTDIQRVPMSKGP*QENQPS
Trigger: GGAAGGCTGGTTCTCCTGCCAGGGTCCCTTTGACAT...GGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
3UTR-3UTR CCA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAACAAAGACCAGGACGTaGTGTGTACGTGTCACTGGC +
Preference number: 2 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRTKTRT*CVRVTG
Trigger: GCCAGTGACACGTACACACCACGTCCTGGTCTTTGT...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR TCA 90 bp GGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACACCGCGATGTTCTGGCTaGCGTTGTGCAGGAGGTCAG +
Preference number: 2 (lower is better)
Translates to: GLENSSFTWFNVIAVQQTPRCSG*RCAGGQ
Trigger: CTGACCTCCTGCACAACGTCAGCCAGAACATCGCGG...TGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
3UTR-3UTR TCA 90 bp GAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAAAGGCAGAGGTTGCGGTaGGCCAAGATCACGCCACTG +
Preference number: 2 (lower is better)
Translates to: ETILIPTDPYDQVLTDIQRQRLR*AKITPL
Trigger: CAGTGGCGTGATCTTGGCTCACCGCAACCTCTGCCT...TTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468793.5
3UTR-3UTR GCA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCGATGTCGCTCACATCTaGCACCAATGGGACAAACAA +
Preference number: 2 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVDVAHI*HQWDKQ
Trigger: TTGTTTGTCCCATTGGTGGCAGATGTGAGCGACATC...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339350.7
ENST00000378206.5
3UTR-3UTR CCA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGACACATCTGCCACCAATaGGACAAACAAAAGGTGCCG +
Preference number: 2 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRHICHQ*DKQKVP
Trigger: CGGCACCTTTTGTTTGTCCCATTGGTGGCAGATGTG...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339350.7
ENST00000378206.5
3UTR-3UTR CCA 90 bp CCAGAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCGTGTGTACGTGTCACTaGCGTTTCCGCACAGGCTGC +
Preference number: 2 (lower is better)
Translates to: PETILIPTDPYDQVLTDIVCTCH*RFRTGC
Trigger: GCAGCCTGTGCGGAAACGCCAGTGACACGTACACAC...GATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR TCA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATCCGCGATGTTCTGGCTaGCGTTGTGCAGGAGGTCAG +
Preference number: 2 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDPRCSG*RCAGGQ
Trigger: CTGACCTCCTGCACAACGTCAGCCAGAACATCGCGG...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
3UTR-3UTR TCA 90 bp CCAGAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCAGCTACTCGGGAGGCTaGGGCAGGAGAATCGCTTTA +
Preference number: 2 (lower is better)
Translates to: PETILIPTDPYDQVLTDISYSGG*GRRIAL
Trigger: TAAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCT...GATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468793.5
3UTR-3UTR GCA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGATGTCGCTCACATCTaGCACCAATGGGACAAACAA +
Preference number: 2 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRDVAHI*HQWDKQ
Trigger: TTGTTTGTCCCATTGGTGGCAGATGTGAGCGACATC...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339350.7
ENST00000378206.5
3UTR-3UTR CCA 90 bp CCAGAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCTGCCATTGTACTGCATaGACCGGAGCCTCTGGCACA +
Preference number: 2 (lower is better)
Translates to: PETILIPTDPYDQVLTDICHCTA*TGASGT
Trigger: TGTGCCAGAGGCTCCGGTCCATGCAGTACAATGGCA...GATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
3UTR-3UTR CCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGTCACAGTTGAGCTTGTaGGTGGTTTTCTTATGGCAG +
Preference number: 2 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWSQLSL*VVFLWQ
Trigger: CTGCCATAAGAAAACCACCCACAAGCTCAACTGTGA...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR CCA 90 bp CCAGAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCAGAATCGCTTTAACCTaGGAGGCAGAGGGTGCAGGG +
Preference number: 2 (lower is better)
Translates to: PETILIPTDPYDQVLTDIRIALT*EAEGAG
Trigger: CCCTGCACCCTCTGCCTCCCAGGTTAAAGCGATTCT...GATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468793.5
3UTR-3UTR TCA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCTTCTTTTCTATTATGTaGTCCAGGTTCCAGGTGCTG +
Preference number: 2 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVFFSIM*SRFQVL
Trigger: CAGCACCTGGAACCTGGATCACATAATAGAAAAGAA...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
3UTR-3UTR CCA 90 bp GAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAAGATGAGCCCCACCTGTaGCTCGTGAAATGCACTGAG +
Preference number: 2 (lower is better)
Translates to: ETILIPTDPYDQVLTDIQDEPHL*LVKCTE
Trigger: CTCAGTGCATTTCACGAGCCACAGGTGGGGCTCATC...TTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000477548.5
3UTR-3UTR CCA 90 bp GGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACATGCCATTGTACTGCATaGACCGGAGCCTCTGGCACA +
Preference number: 2 (lower is better)
Translates to: GLENSSFTWFNVIAVQQTCHCTA*TGASGT
Trigger: TGTGCCAGAGGCTCCGGTCCATGCAGTACAATGGCA...TGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
3UTR-3UTR CCA 90 bp GAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAAATGTCAAAGGGACCCTaGCAGGAGAACCAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: ETILIPTDPYDQVLTDIQMSKGP*QENQPS
Trigger: GGAAGGCTGGTTCTCCTGCCAGGGTCCCTTTGACAT...TTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
3UTR-3UTR CCA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATGTGTGTACGTGTCACTaGCGTTTCCGCACAGGCTGC +
Preference number: 2 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDVCTCH*RFRTGC
Trigger: GCAGCCTGTGCGGAAACGCCAGTGACACGTACACAC...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR CCA 90 bp CCAGAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCACAAAGACCAGGACGTaGTGTGTACGTGTCACTGGC +
Preference number: 2 (lower is better)
Translates to: PETILIPTDPYDQVLTDITKTRT*CVRVTG
Trigger: GCCAGTGACACGTACACACCACGTCCTGGTCTTTGT...GATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR TCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACGGTGACCACATTACATaGGCAAACCCAACGCTGGTG +
Preference number: 2 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDGDHIT*ANPTLV
Trigger: CACCAGCGTTGGGTTTGCTCATGTAATGTGGTCACC...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR CCA 90 bp GAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAAACAAAGACCAGGACGTaGTGTGTACGTGTCACTGGC +
Preference number: 2 (lower is better)
Translates to: ETILIPTDPYDQVLTDIQTKTRT*CVRVTG
Trigger: GCCAGTGACACGTACACACCACGTCCTGGTCTTTGT...TTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR CCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACACAAAGACCAGGACGTaGTGTGTACGTGTCACTGGC +
Preference number: 2 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDTKTRT*CVRVTG
Trigger: GCCAGTGACACGTACACACCACGTCCTGGTCTTTGT...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR CCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGTAATCCCAGCACTTTaGGAGACCGAGGCGGGCAGA +
Preference number: 2 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTVIPAL*ETEAGR
Trigger: TCTGCCCGCCTCGGTCTCCCAAAGTGCTGGGATTAC...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR TCA 90 bp CTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCTTCTTTTCTATTATGTaGTCCAGGTTCCAGGTGCTG +
Preference number: 2 (lower is better)
Translates to: LIPTDPYDQVLTDIQRVPFFSIM*SRFQVL
Trigger: CAGCACCTGGAACCTGGATCACATAATAGAAAAGAA...GGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
3UTR-3UTR TCA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATGGTGACCACATTACATaGGCAAACCCAACGCTGGTG +
Preference number: 2 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDGDHIT*ANPTLV
Trigger: CACCAGCGTTGGGTTTGCTCATGTAATGTGGTCACC...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR TCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAAGGCGGAGGTTGCAGTaGGCCAAGATTGCATCACTG +
Preference number: 2 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTRRRLQ*AKIASL
Trigger: CAGTGATGCAATCTTGGCTCACTGCAACCTCCGCCT...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR GCA 90 bp GAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACTCTGTCGAAGTAGCTaGCATTGTACTGCATGGACC +
Preference number: 2 (lower is better)
Translates to: ETILIPTDPYDQVLTDIQLCRSS*HCTAWT
Trigger: GGTCCATGCAGTACAATGGCAGCTACTTCGACAGAG...TTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
3UTR-3UTR CCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAATGTCAAAGGGACCCTaGCAGGAGAACCAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTMSKGP*QENQPS
Trigger: GGAAGGCTGGTTCTCCTGCCAGGGTCCCTTTGACAT...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
3UTR-3UTR CCA 90 bp CTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCTGGGTGGTTTTCTTATaGCAGACAATGTGCACTAGT +
Preference number: 2 (lower is better)
Translates to: LIPTDPYDQVLTDIQRVPWVVFL*QTMCTS
Trigger: ACTAGTGCACATTGTCTGCCATAAGAAAACCACCCA...GGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR CCA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATACAAAGACCAGGACGTaGTGTGTACGTGTCACTGGC +
Preference number: 2 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDTKTRT*CVRVTG
Trigger: GCCAGTGACACGTACACACCACGTCCTGGTCTTTGT...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR GCA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATCTCTGTCGAAGTAGCTaGCATTGTACTGCATGGACC +
Preference number: 2 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDLCRSS*HCTAWT
Trigger: GGTCCATGCAGTACAATGGCAGCTACTTCGACAGAG...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
3UTR-3UTR TCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCCCCACCTGTGGCTCGTaGAATGCACTGAGGAAGCGC +
Preference number: 2 (lower is better)
Translates to: CKCIRLNHEINDRSPFLAPTCGS*NALRKR
Trigger: GCGCTTCCTCAGTGCATTTCACGAGCCACAGGTGGG...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000477548.5
3UTR-3UTR TCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCCCGCGATGTTCTGGCTaGCGTTGTGCAGGAGGTCAG +
Preference number: 2 (lower is better)
Translates to: CKCIRLNHEINDRSPFLAPRCSG*RCAGGQ
Trigger: CTGACCTCCTGCACAACGTCAGCCAGAACATCGCGG...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
3UTR-3UTR TCA 90 bp CCAGAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCTTCTTTTCTATTATGTaGTCCAGGTTCCAGGTGCTG +
Preference number: 2 (lower is better)
Translates to: PETILIPTDPYDQVLTDIFFSIM*SRFQVL
Trigger: CAGCACCTGGAACCTGGATCACATAATAGAAAAGAA...GATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
3UTR-3UTR TCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGCCTGGCCAACATGGTaGAACCCCGTTTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTAWPTW*NPVSTK
Trigger: TTTAGTAGAAACGGGGTTTCACCATGTTGGCCAGGC...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR TCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCGGCGGGCAGATCACCTaGGGTCAGGAGTTCGAGAAC +
Preference number: 2 (lower is better)
Translates to: CKCIRLNHEINDRSPFLAGGQIT*GQEFEN
Trigger: GTTCTCGAACTCCTGACCTCAGGTGATCTGCCCGCC...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR CCA 90 bp CCAGAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCTGGGTGGTTTTCTTATaGCAGACAATGTGCACTAGT +
Preference number: 2 (lower is better)
Translates to: PETILIPTDPYDQVLTDIWVVFL*QTMCTS
Trigger: ACTAGTGCACATTGTCTGCCATAAGAAAACCACCCA...GATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR CCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACTCACAGTTGAGCTTGTaGGTGGTTTTCTTATGGCAG +
Preference number: 2 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDSQLSL*VVFLWQ
Trigger: CTGCCATAAGAAAACCACCCACAAGCTCAACTGTGA...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR CCA 90 bp GAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAATCACAGTTGAGCTTGTaGGTGGTTTTCTTATGGCAG +
Preference number: 2 (lower is better)
Translates to: ETILIPTDPYDQVLTDIQSQLSL*VVFLWQ
Trigger: CTGCCATAAGAAAACCACCCACAAGCTCAACTGTGA...TTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR CCA 90 bp CCAGAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCTTTGTAGATTCTGCTTaGGTCACAGTTGAGCTTGTG +
Preference number: 2 (lower is better)
Translates to: PETILIPTDPYDQVLTDIFVDSA*VTVELV
Trigger: CACAAGCTCAACTGTGACCCAAGCAGAATCTACAAA...GATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR TCA 90 bp GGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACATTCTTTTCTATTATGTaGTCCAGGTTCCAGGTGCTG +
Preference number: 2 (lower is better)
Translates to: GLENSSFTWFNVIAVQQTFFSIM*SRFQVL
Trigger: CAGCACCTGGAACCTGGATCACATAATAGAAAAGAA...TGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
3UTR-3UTR CCA 90 bp GAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAATGGGTGGTTTTCTTATaGCAGACAATGTGCACTAGT +
Preference number: 2 (lower is better)
Translates to: ETILIPTDPYDQVLTDIQWVVFL*QTMCTS
Trigger: ACTAGTGCACATTGTCTGCCATAAGAAAACCACCCA...TTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR CCA 90 bp GGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACATTTGTAGATTCTGCTTaGGTCACAGTTGAGCTTGTG +
Preference number: 2 (lower is better)
Translates to: GLENSSFTWFNVIAVQQTFVDSA*VTVELV
Trigger: CACAAGCTCAACTGTGACCCAAGCAGAATCTACAAA...TGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR CCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACTTTGTAGATTCTGCTTaGGTCACAGTTGAGCTTGTG +
Preference number: 2 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDFVDSA*VTVELV
Trigger: CACAAGCTCAACTGTGACCCAAGCAGAATCTACAAA...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR CCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCGATGAGCCCCACCTGTaGCTCGTGAAATGCACTGAG +
Preference number: 2 (lower is better)
Translates to: CKCIRLNHEINDRSPFLADEPHL*LVKCTE
Trigger: CTCAGTGCATTTCACGAGCCACAGGTGGGGCTCATC...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000477548.5
3UTR-3UTR CCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCATGTCAAAGGGACCCTaGCAGGAGAACCAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: CKCIRLNHEINDRSPFLAMSKGP*QENQPS
Trigger: GGAAGGCTGGTTCTCCTGCCAGGGTCCCTTTGACAT...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
3UTR-3UTR CCA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATTTTGTAGATTCTGCTTaGGTCACAGTTGAGCTTGTG +
Preference number: 2 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDFVDSA*VTVELV
Trigger: CACAAGCTCAACTGTGACCCAAGCAGAATCTACAAA...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR TCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCGGTGACCACATTACATaGGCAAACCCAACGCTGGTG +
Preference number: 2 (lower is better)
Translates to: CKCIRLNHEINDRSPFLAGDHIT*ANPTLV
Trigger: CACCAGCGTTGGGTTTGCTCATGTAATGTGGTCACC...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR CCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACATGGGTGGTTTTCTTATaGCAGACAATGTGCACTAGT +
Preference number: 2 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTWVVFL*QTMCTS
Trigger: ACTAGTGCACATTGTCTGCCATAAGAAAACCACCCA...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR CCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCTCACAGTTGAGCTTGTaGGTGGTTTTCTTATGGCAG +
Preference number: 2 (lower is better)
Translates to: CKCIRLNHEINDRSPFLASQLSL*VVFLWQ
Trigger: CTGCCATAAGAAAACCACCCACAAGCTCAACTGTGA...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR-3UTR CCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCTGGGTGGTTTTCTTATaGCAGACAATGTGCACTAGT +
Preference number: 2 (lower is better)
Translates to: CKCIRLNHEINDRSPFLAWVVFL*QTMCTS
Trigger: ACTAGTGCACATTGTCTGCCATAAGAAAACCACCCA...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR CCA 72 bp GAGGAAGCGCCTGATGTCGCTCACATCTGCCACCAATaGGACAAACAAAAGGTGCCGGTCCAGCAGAAGACA +
Preference number: 3 (lower is better)
Translates to: EEAPDVAHICHQ*DKQKVPVQQKT
Trigger: TGTCTTCTGCTGGACCGGCACCTTTTGTTTGTCCCATTGGTGGCAGATGTGAGCGACATCAGGCGCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339350.7
ENST00000378206.5
3UTR CCA 72 bp TCAAACAAAGACCAGGACGTGGTGTGTACGTGTCACTaGCGTTTCCGCACAGGCTGCTTCCGCTTCAACCTT +
Preference number: 3 (lower is better)
Translates to: SNKDQDVVCTCH*RFRTGCFRFNL
Trigger: AAGGTTGAAGCGGAAGCAGCCTGTGCGGAAACGCCAGTGACACGTACACACCACGTCCTGGTCTTTGTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339350.7
ENST00000378206.5
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
3UTR CCA 72 bp CTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTaGTTCAACGTGATAGCTGTTCAACAGACATTGGGG +
Preference number: 3 (lower is better)
Translates to: LTIFGLENSSFT*FNVIAVQQTLG
Trigger: CCCCAATGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCGACGCCACCTGGTGTaGCCAGGTGCCGTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVRRHLV*PGAVAP
Trigger: CGGGGCCACGGCACCTGGGCACACCAGGTGGCGTCG...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338895.7
ENST00000491998.5
CDS-3UTR TCA 90 bp CTGATGTCGCTCACATCTGCCACCAATGGGACAAACAAAAGGTGCCGGTCCAGCGCTGGGCGGCCTGGATaGGCCCCACCTGTGGCTCGT +
Preference number: 4 (lower is better)
Translates to: LMSLTSATNGTNKRCRSSAGRPG*APPVAR
Trigger: ACGAGCCACAGGTGGGGCTCATCCAGGCCGCCCAGC...GCTGGACCGGCACCTTTTGTTTGTCCCATTGGTGGCAGATGTGAGCGACATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339350.7
ENST00000378206.5
CDS-3UTR TCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGGCTGGGCGGCCTGGATaGGCCCCACCTGTGGCTCGT +
Preference number: 4 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWAGRPG*APPVAR
Trigger: ACGAGCCACAGGTGGGGCTCATCCAGGCCGCCCAGC...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCAGGCGCGACGCCACCTaGTGTGCCCAGGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVRRDAT*CAQVPW
Trigger: CCACGGCACCTGGGCACACCAGGTGGCGTCGCGCCT...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338895.7
ENST00000491998.5
CDS-3UTR CCA 90 bp CTGATGTCGCTCACATCTGCCACCAATGGGACAAACAAAAGGTGCCGGTCCAGCGGGTCCCACAGGCGGTaGCACCTGCTGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LMSLTSATNGTNKRCRSSGSHRR*HLLPSC
Trigger: GCAGCTGGGCAGCAGGTGCCACCGCCTGTGGGACCC...GCTGGACCGGCACCTTTTGTTTGTCCCATTGGTGGCAGATGTGAGCGACATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339350.7
ENST00000378206.5
CDS-3UTR CCA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCGGGTCCCACAGGCGGTaGCACCTGCTGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVGSHRR*HLLPSC
Trigger: GCAGCTGGGCAGCAGGTGCCACCGCCTGTGGGACCC...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp CTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCGACGCCACCTGGTGTaGCCAGGTGCCGTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LIPTDPYDQVLTDIQRVPRRHLV*PGAVAP
Trigger: CGGGGCCACGGCACCTGGGCACACCAGGTGGCGTCG...GGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338895.7
ENST00000491998.5
CDS-3UTR CCA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCGATCCGTCCTCGCCCTaGCCGCAGGGGTCTGCACCT +
Preference number: 4 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVDPSSP*PQGSAP
Trigger: AGGTGCAGACCCCTGCGGCCAGGGCGAGGACGGATC...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGTTGCGCAGCACCTCCTaGCAGCTCCGGCCAGCCACG +
Preference number: 4 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWLRSTS*QLRPAT
Trigger: CGTGGCTGGCCGGAGCTGCCAGGAGGTGCTGCGCAA...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CTGATGTCGCTCACATCTGCCACCAATGGGACAAACAAAAGGTGCCGGTCCAGCAGCTGCTGGGCGGCCTaGATGAGCCCCACCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LMSLTSATNGTNKRCRSSSCWAA*MSPTCG
Trigger: GCCACAGGTGGGGCTCATCCAGGCCGCCCAGCAGCT...GCTGGACCGGCACCTTTTGTTTGTCCCATTGGTGGCAGATGTGAGCGACATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339350.7
ENST00000378206.5
CDS-3UTR GCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGCACCTGCTGCCCAGCTaGTCAGATCCGTCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWHLLPS*SDPSSP
Trigger: GGGCGAGGACGGATCTGAGCAGCTGGGCAGCAGGTG...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCAGCGGAGACAGCCCTTaGGCAGCACCTCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVSGDSP*AAPPGS
Trigger: GCTGCCAGGAGGTGCTGCGCAAGGGCTGTCTCCGCT...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCTGCCACTCACAGCCCTaGCAGGCCTGGCCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVCHSQP*QAWPKV
Trigger: CACCTTGGGCCAGGCCTGGCAGGGCTGTGAGTGGCA...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338895.7
ENST00000468793.5
ENST00000475969.5
CDS-3UTR GCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGTGCCACTCACAGCCCTaGCAGGCCTGGCCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWCHSQP*QAWPKV
Trigger: CACCTTGGGCCAGGCCTGGCAGGGCTGTGAGTGGCA...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338895.7
ENST00000468793.5
ENST00000475969.5
CDS-3UTR GCA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCTCCAGACCGTCTCTGTaGACCCGCCACCCACACGGC +
Preference number: 4 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVSRPSL*TRHPHG
Trigger: GCCGTGTGGGTGGCGGGTGCACAGAGACGGTCTGGA...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGATCCGTCCTCGCCCTaGCCGCAGGGGTCTGCACCT +
Preference number: 4 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRDPSSP*PQGSAP
Trigger: AGGTGCAGACCCCTGCGGCCAGGGCGAGGACGGATC...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCGGGTCCCACAGGCGGTaGCACCTGCTGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LIPTDPYDQVLTDIQRVPGSHRR*HLLPSC
Trigger: GCAGCTGGGCAGCAGGTGCCACCGCCTGTGGGACCC...GGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGATTGCGCAGCACCTCCTaGCAGCTCCGGCCAGCCACG +
Preference number: 4 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRLRSTS*QLRPAT
Trigger: CGTGGCTGGCCGGAGCTGCCAGGAGGTGCTGCGCAA...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp CCAGAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCCCGACGCGGTCTTGTaGGCAGGCGTCGCCCCACGG +
Preference number: 4 (lower is better)
Translates to: PETILIPTDPYDQVLTDIPDAVL*AGVAPR
Trigger: CCGTGGGGCGACGCCTGCGCACAAGACCGCGTCGGG...GATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338895.7
ENST00000491998.5
CDS-3UTR GCA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCACACCAACAGAGCCCTaGCAGGCCTGGCCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVTPTEP*QAWPKV
Trigger: CACCTTGGGCCAGGCCTGGCAGGGCTCTGTTGGTGT...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339350.7
CDS-3UTR CCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGGTGAGCTCTGCAAGCTaGCACAGGCCGGGTGCCGAT +
Preference number: 4 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWVSSAS*HRPGAD
Trigger: ATCGGCACCCGGCCTGTGCCAGCTTGCAGAGCTCAC...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338895.7
ENST00000468793.5
ENST00000491998.5
CDS-3UTR TCA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCAAGGCCTGGGAAAAGTaGGGCCCGACGCGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVKAWEK*GPTRSC
Trigger: ACAAGACCGCGTCGGGCCTCACTTTTCCCAGGCCTT...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338895.7
ENST00000491998.5
CDS-3UTR TCA 90 bp CTGATGTCGCTCACATCTGCCACCAATGGGACAAACAAAAGGTGCCGGTCCAGCCCCACCTGTGGCTCGTaGAATGCACTGAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: LMSLTSATNGTNKRCRSSPTCGS*NALRKR
Trigger: GCGCTTCCTCAGTGCATTTCACGAGCCACAGGTGGG...GCTGGACCGGCACCTTTTGTTTGTCCCATTGGTGGCAGATGTGAGCGACATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339350.7
ENST00000378206.5
CDS-3UTR TCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGCCCACCTGTGGCTCGTaGAATGCACTGAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWPTCGS*NALRKR
Trigger: GCGCTTCCTCAGTGCATTTCACGAGCCACAGGTGGG...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCGGCGGGCAGATCACCTaGGGTCAGGAGTTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVGGQIT*GQEFEN
Trigger: GTTCTCGAACTCCTGACCTCAGGTGATCTGCCCGCC...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp CTGATGTCGCTCACATCTGCCACCAATGGGACAAACAAAAGGTGCCGGTCCAGCGGCGGGCAGATCACCTaGGGTCAGGAGTTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: LMSLTSATNGTNKRCRSSGGQIT*GQEFEN
Trigger: GTTCTCGAACTCCTGACCTCAGGTGATCTGCCCGCC...GCTGGACCGGCACCTTTTGTTTGTCCCATTGGTGGCAGATGTGAGCGACATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339350.7
ENST00000378206.5
CDS-3UTR TCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGGGCGGGCAGATCACCTaGGGTCAGGAGTTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWGGQIT*GQEFEN
Trigger: GTTCTCGAACTCCTGACCTCAGGTGATCTGCCCGCC...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp CTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCACCTGCTGCCCAGCTaGTCAGATCCGTCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: LIPTDPYDQVLTDIQRVPHLLPS*SDPSSP
Trigger: GGGCGAGGACGGATCTGAGCAGCTGGGCAGCAGGTG...GGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp CTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCAGCGGAGACAGCCCTTaGGCAGCACCTCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LIPTDPYDQVLTDIQRVPSGDSP*AAPPGS
Trigger: GCTGCCAGGAGGTGCTGCGCAAGGGCTGTCTCCGCT...GGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp CTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCTCCAGACCGTCTCTGTaGACCCGCCACCCACACGGC +
Preference number: 4 (lower is better)
Translates to: LIPTDPYDQVLTDIQRVPSRPSL*TRHPHG
Trigger: GCCGTGTGGGTGGCGGGTGCACAGAGACGGTCTGGA...GGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGATGTCCTCAAGCCCTCTaGGTCCCACAGGCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRCPQAL*VPQAVA
Trigger: TGCCACCGCCTGTGGGACCCAGAGGGCTTGAGGACA...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCCGCGCTCAGGGAGCTaGAAGCGGAGACAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LIPTDPYDQVLTDIQRVPPRSGS*KRRQPL
Trigger: CAAGGGCTGTCTCCGCTTCCAGCTCCCTGAGCGCGG...GGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCGGCGGCTGCCGCCCTTaGCTCCTCTGTCGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: LIPTDPYDQVLTDIQRVPGGCRP*LLCRSS
Trigger: GCTACTTCGACAGAGGAGCCAAGGGCGGCAGCCGCC...GGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp CTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCGGGGTCTGCACCTGGTaGGCTCTGCAAGCTGGCACA +
Preference number: 4 (lower is better)
Translates to: LIPTDPYDQVLTDIQRVPGVCTW*ALQAGT
Trigger: TGTGCCAGCTTGCAGAGCTCACCAGGTGCAGACCCC...GGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGACCCACCTGTGGCTCGTaGAATGCACTGAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRPTCGS*NALRKR
Trigger: GCGCTTCCTCAGTGCATTTCACGAGCCACAGGTGGG...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGACCGCGATGTTCTGGCTaGCGTTGTGCAGGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRPRCSG*RCAGGQ
Trigger: CTGACCTCCTGCACAACGTCAGCCAGAACATCGCGG...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGGCGGGCAGATCACCTaGGGTCAGGAGTTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRGGQIT*GQEFEN
Trigger: GTTCTCGAACTCCTGACCTCAGGTGATCTGCCCGCC...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAAGGCAGAGGTTGCGGTaGGCCAAGATCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRRQRLR*AKITPL
Trigger: CAGTGGCGTGATCTTGGCTCACCGCAACCTCTGCCT...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468793.5
CDS-3UTR GCA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATCCCGACGCGGTCTTGTaGGCAGGCGTCGCCCCACGG +
Preference number: 4 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDPDAVL*AGVAPR
Trigger: CCGTGGGGCGACGCCTGCGCACAAGACCGCGTCGGG...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338895.7
ENST00000491998.5
CDS-3UTR CCA 90 bp CCAGAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCGATCCGTCCTCGCCCTaGCCGCAGGGGTCTGCACCT +
Preference number: 4 (lower is better)
Translates to: PETILIPTDPYDQVLTDIDPSSP*PQGSAP
Trigger: AGGTGCAGACCCCTGCGGCCAGGGCGAGGACGGATC...GATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp GGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACAGGGTCCCACAGGCGGTaGCACCTGCTGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GLENSSFTWFNVIAVQQTGSHRR*HLLPSC
Trigger: GCAGCTGGGCAGCAGGTGCCACCGCCTGTGGGACCC...TGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCTGTCCTCAAGCCCTCTaGGTCCCACAGGCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LIPTDPYDQVLTDIQRVPCPQAL*VPQAVA
Trigger: TGCCACCGCCTGTGGGACCCAGAGGGCTTGAGGACA...GGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CCAGAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCTTGCGCAGCACCTCCTaGCAGCTCCGGCCAGCCACG +
Preference number: 4 (lower is better)
Translates to: PETILIPTDPYDQVLTDILRSTS*QLRPAT
Trigger: CGTGGCTGGCCGGAGCTGCCAGGAGGTGCTGCGCAA...GATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGGTGTGTACGTGTCACTaGCGTTTCCGCACAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWVCTCH*RFRTGC
Trigger: GCAGCCTGTGCGGAAACGCCAGTGACACGTACACAC...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CTGATGTCGCTCACATCTGCCACCAATGGGACAAACAAAAGGTGCCGGTCCAGCGTAATCCCAGCACTTTaGGAGACCGAGGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LMSLTSATNGTNKRCRSSVIPAL*ETEAGR
Trigger: TCTGCCCGCCTCGGTCTCCCAAAGTGCTGGGATTAC...GCTGGACCGGCACCTTTTGTTTGTCCCATTGGTGGCAGATGTGAGCGACATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339350.7
ENST00000378206.5
CDS-3UTR TCA 90 bp CTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCGGCGGGCAGATCACCTaGGGTCAGGAGTTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: LIPTDPYDQVLTDIQRVPGGQIT*GQEFEN
Trigger: GTTCTCGAACTCCTGACCTCAGGTGATCTGCCCGCC...GGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp CTGATGTCGCTCACATCTGCCACCAATGGGACAAACAAAAGGTGCCGGTCCAGCCCCACACGGCTGACATaGGCTCCATATGATCCGAGA +
Preference number: 4 (lower is better)
Translates to: LMSLTSATNGTNKRCRSSPTRLT*APYDPR
Trigger: TCTCGGATCATATGGAGCTCATGTCAGCCGTGTGGG...GCTGGACCGGCACCTTTTGTTTGTCCCATTGGTGGCAGATGTGAGCGACATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339350.7
ENST00000378206.5
CDS-3UTR TCA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCCCACACGGCTGACATaGGCTCCATATGATCCGAGA +
Preference number: 4 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVPTRLT*APYDPR
Trigger: TCTCGGATCATATGGAGCTCATGTCAGCCGTGTGGG...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGCCCACACGGCTGACATaGGCTCCATATGATCCGAGA +
Preference number: 4 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWPTRLT*APYDPR
Trigger: TCTCGGATCATATGGAGCTCATGTCAGCCGTGTGGG...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGATCTTTGTCCTTGCCCTaGCACCAACAGAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRSLSLP*HQQSPA
Trigger: GGCAGGGCTCTGTTGGTGTCAGGGCAAGGACAAAGA...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339350.7
CDS-3UTR TCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGAGCTACTCGGGAGGCTaGGGCAGGAGAATCGCTTTA +
Preference number: 4 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWSYSGG*GRRIAL
Trigger: TAAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCT...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468793.5
CDS-3UTR GCA 90 bp CCAGAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCTCCAGACCGTCTCTGTaGACCCGCCACCCACACGGC +
Preference number: 4 (lower is better)
Translates to: PETILIPTDPYDQVLTDISRPSL*TRHPHG
Trigger: GCCGTGTGGGTGGCGGGTGCACAGAGACGGTCTGGA...GATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCTGTGCCCAGGTGCCGTaGCCCCGGAAACTACACAAC +
Preference number: 4 (lower is better)
Translates to: LIPTDPYDQVLTDIQRVPCAQVP*PRKLHN
Trigger: GTTGTGTAGTTTCCGGGGCCACGGCACCTGGGCACA...GGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338895.7
ENST00000491998.5
CDS-3UTR CCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACGATCCGTCCTCGCCCTaGCCGCAGGGGTCTGCACCT +
Preference number: 4 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDDPSSP*PQGSAP
Trigger: AGGTGCAGACCCCTGCGGCCAGGGCGAGGACGGATC...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp GAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAATTGCGCAGCACCTCCTaGCAGCTCCGGCCAGCCACG +
Preference number: 4 (lower is better)
Translates to: ETILIPTDPYDQVLTDIQLRSTS*QLRPAT
Trigger: CGTGGCTGGCCGGAGCTGCCAGGAGGTGCTGCGCAA...TTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACTTGCGCAGCACCTCCTaGCAGCTCCGGCCAGCCACG +
Preference number: 4 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDLRSTS*QLRPAT
Trigger: CGTGGCTGGCCGGAGCTGCCAGGAGGTGCTGCGCAA...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGGATGAGCCCCACCTGTaGCTCGTGAAATGCACTGAG +
Preference number: 4 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWDEPHL*LVKCTE
Trigger: CTCAGTGCATTTCACGAGCCACAGGTGGGGCTCATC...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp GGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACAAGCTGCTGGGCGGCCTaGATGAGCCCCACCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GLENSSFTWFNVIAVQQTSCWAA*MSPTCG
Trigger: GCCACAGGTGGGGCTCATCCAGGCCGCCCAGCAGCT...TGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACAGCTGCTGGGCGGCCTaGATGAGCCCCACCTGTGGC +
Preference number: 4 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDSCWAA*MSPTCG
Trigger: GCCACAGGTGGGGCTCATCCAGGCCGCCCAGCAGCT...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGTGCCATTGTACTGCATaGACCGGAGCCTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWCHCTA*TGASGT
Trigger: TGTGCCAGAGGCTCCGGTCCATGCAGTACAATGGCA...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCATGTCAAAGGGACCCTaGCAGGAGAACCAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVMSKGP*QENQPS
Trigger: GGAAGGCTGGTTCTCCTGCCAGGGTCCCTTTGACAT...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGTAATCCCAGCACTTTaGGAGACCGAGGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRVIPAL*ETEAGR
Trigger: TCTGCCCGCCTCGGTCTCCCAAAGTGCTGGGATTAC...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGCTGGGCGGCCTGGATaGGCCCCACCTGTGGCTCGT +
Preference number: 4 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTAGRPG*APPVAR
Trigger: ACGAGCCACAGGTGGGGCTCATCCAGGCCGCCCAGC...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGACCCACACGGCTGACATaGGCTCCATATGATCCGAGA +
Preference number: 4 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRPTRLT*APYDPR
Trigger: TCTCGGATCATATGGAGCTCATGTCAGCCGTGTGGG...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp CTGATGTCGCTCACATCTGCCACCAATGGGACAAACAAAAGGTGCCGGTCCAGCCACAAGAAGAGCCTCTaGCCACATCTTCCCCCATTC +
Preference number: 4 (lower is better)
Translates to: LMSLTSATNGTNKRCRSSHKKSL*PHLPPF
Trigger: GAATGGGGGAAGATGTGGTCAGAGGCTCTTCTTGTG...GCTGGACCGGCACCTTTTGTTTGTCCCATTGGTGGCAGATGTGAGCGACATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339350.7
CDS-3UTR GCA 90 bp GAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACACCTGCTGCCCAGCTaGTCAGATCCGTCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: ETILIPTDPYDQVLTDIQHLLPS*SDPSSP
Trigger: GGGCGAGGACGGATCTGAGCAGCTGGGCAGCAGGTG...TTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp GGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACAAGCGGAGACAGCCCTTaGGCAGCACCTCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GLENSSFTWFNVIAVQQTSGDSP*AAPPGS
Trigger: GCTGCCAGGAGGTGCTGCGCAAGGGCTGTCTCCGCT...TGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACTGCCACTCACAGCCCTaGCAGGCCTGGCCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDCHSQP*QAWPKV
Trigger: CACCTTGGGCCAGGCCTGGCAGGGCTGTGAGTGGCA...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338895.7
ENST00000468793.5
ENST00000475969.5
CDS-3UTR GCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGGGGACAAACAAAAGGTaGCGGTCCAGCAGAAGACAC +
Preference number: 4 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWGTNKR*RSSRRH
Trigger: GTGTCTTCTGCTGGACCGGCACCTTTTGTTTGTCCC...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
CDS-3UTR GCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGGCAGTGAGCCAAGATTaGATCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWAVSQD*ITALQP
Trigger: AGGCTGGAGTGCAGTGATGCAATCTTGGCTCACTGC...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCGCAGTGAGCCAAGATTaGATCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVAVSQD*ITALQP
Trigger: AGGCTGGAGTGCAGTGATGCAATCTTGGCTCACTGC...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp CTGATGTCGCTCACATCTGCCACCAATGGGACAAACAAAAGGTGCCGGTCCAGCCTGAGAGGCGGAGGTTaGAGTGAGCCAAGATTGCAT +
Preference number: 4 (lower is better)
Translates to: LMSLTSATNGTNKRCRSSLRGGG*SEPRLH
Trigger: ATGCAATCTTGGCTCACTGCAACCTCCGCCTCTCAG...GCTGGACCGGCACCTTTTGTTTGTCCCATTGGTGGCAGATGTGAGCGACATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339350.7
ENST00000378206.5
CDS-3UTR GCA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTGAGAGGCGGAGGTTaGAGTGAGCCAAGATTGCAT +
Preference number: 4 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVLRGGG*SEPRLH
Trigger: ATGCAATCTTGGCTCACTGCAACCTCCGCCTCTCAG...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGCTGAGAGGCGGAGGTTaGAGTGAGCCAAGATTGCAT +
Preference number: 4 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWLRGGG*SEPRLH
Trigger: ATGCAATCTTGGCTCACTGCAACCTCCGCCTCTCAG...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp GGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACATCCAGACCGTCTCTGTaGACCCGCCACCCACACGGC +
Preference number: 4 (lower is better)
Translates to: GLENSSFTWFNVIAVQQTSRPSL*TRHPHG
Trigger: GCCGTGTGGGTGGCGGGTGCACAGAGACGGTCTGGA...TGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp GAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAATCCAGACCGTCTCTGTaGACCCGCCACCCACACGGC +
Preference number: 4 (lower is better)
Translates to: ETILIPTDPYDQVLTDIQSRPSL*TRHPHG
Trigger: GCCGTGTGGGTGGCGGGTGCACAGAGACGGTCTGGA...TTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCAGAAGACACATCCTaGCCCGGTCACAAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRAEDTS*PGHKKS
Trigger: GCTCTTCTTGTGACCGGGGCAGGATGTGTCTTCTGC...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339350.7
CDS-3UTR CCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAAGGCGCGACGCCACCTaGTGTGCCCAGGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTRRDAT*CAQVPW
Trigger: CCACGGCACCTGGGCACACCAGGTGGCGTCGCGCCT...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338895.7
ENST00000491998.5
CDS-3UTR CCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGGGTCCCACAGGCGGTaGCACCTGCTGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTGSHRR*HLLPSC
Trigger: GCAGCTGGGCAGCAGGTGCCACCGCCTGTGGGACCC...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CTGATGTCGCTCACATCTGCCACCAATGGGACAAACAAAAGGTGCCGGTCCAGCACGCTCTTGGGCTTCTaGAGCATTGCAGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: LMSLTSATNGTNKRCRSSTLLGF*SIADVL
Trigger: GAGGACATCTGCAATGCTCCAGAAGCCCAAGAGCGT...GCTGGACCGGCACCTTTTGTTTGTCCCATTGGTGGCAGATGTGAGCGACATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339350.7
ENST00000378206.5
CDS-3UTR CCA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCACGCTCTTGGGCTTCTaGAGCATTGCAGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVTLLGF*SIADVL
Trigger: GAGGACATCTGCAATGCTCCAGAAGCCCAAGAGCGT...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp GAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACCGCGCTCAGGGAGCTaGAAGCGGAGACAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: ETILIPTDPYDQVLTDIQPRSGS*KRRQPL
Trigger: CAAGGGCTGTCTCCGCTTCCAGCTCCCTGAGCGCGG...TTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACCCGCGCTCAGGGAGCTaGAAGCGGAGACAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDPRSGS*KRRQPL
Trigger: CAAGGGCTGTCTCCGCTTCCAGCTCCCTGAGCGCGG...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGCTGGGCGGCCTaGATGAGCCCCACCTGTGGC +
Preference number: 4 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDSCWAA*MSPTCG
Trigger: GCCACAGGTGGGGCTCATCCAGGCCGCCCAGCAGCT...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGATGCCATTGTACTGCATaGACCGGAGCCTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRCHCTA*TGASGT
Trigger: TGTGCCAGAGGCTCCGGTCCATGCAGTACAATGGCA...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp GAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAAGGCGGCTGCCGCCCTTaGCTCCTCTGTCGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: ETILIPTDPYDQVLTDIQGGCRP*LLCRSS
Trigger: GCTACTTCGACAGAGGAGCCAAGGGCGGCAGCCGCC...TTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCGTGTGTACGTGTCACTaGCGTTTCCGCACAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LIPTDPYDQVLTDIQRVPVCTCH*RFRTGC
Trigger: GCAGCCTGTGCGGAAACGCCAGTGACACGTACACAC...GGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCACAAAGACCAGGACGTaGTGTGTACGTGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVTKTRT*CVRVTG
Trigger: GCCAGTGACACGTACACACCACGTCCTGGTCTTTGT...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp CCAGAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCAAGGCCTGGGAAAAGTaGGGCCCGACGCGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: PETILIPTDPYDQVLTDIKAWEK*GPTRSC
Trigger: ACAAGACCGCGTCGGGCCTCACTTTTCCCAGGCCTT...GATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338895.7
ENST00000491998.5
CDS-3UTR TCA 90 bp GGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACAGGGGTCTGCACCTGGTaGGCTCTGCAAGCTGGCACA +
Preference number: 4 (lower is better)
Translates to: GLENSSFTWFNVIAVQQTGVCTW*ALQAGT
Trigger: TGTGCCAGCTTGCAGAGCTCACCAGGTGCAGACCCC...TGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp CCAGAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCCGCGATGTTCTGGCTaGCGTTGTGCAGGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: PETILIPTDPYDQVLTDIPRCSG*RCAGGQ
Trigger: CTGACCTCCTGCACAACGTCAGCCAGAACATCGCGG...GATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATCACCTGCTGCCCAGCTaGTCAGATCCGTCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDHLLPS*SDPSSP
Trigger: GGGCGAGGACGGATCTGAGCAGCTGGGCAGCAGGTG...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCGGAGACAGCCCTTaGGCAGCACCTCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDSGDSP*AAPPGS
Trigger: GCTGCCAGGAGGTGCTGCGCAAGGGCTGTCTCCGCT...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGCTCTGTCGAAGTAGCTaGCATTGTACTGCATGGACC +
Preference number: 4 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWLCRSS*HCTAWT
Trigger: GGTCCATGCAGTACAATGGCAGCTACTTCGACAGAG...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGACTGAGAGGCGGAGGTTaGAGTGAGCCAAGATTGCAT +
Preference number: 4 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRLRGGG*SEPRLH
Trigger: ATGCAATCTTGGCTCACTGCAACCTCCGCCTCTCAG...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATTGGCGAAACCAGCCCTaGCAGGCCTGGCCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDWRNQP*QAWPKV
Trigger: CACCTTGGGCCAGGCCTGGCAGGGCTGGTTTCGCCA...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477548.5
CDS-3UTR CCA 90 bp GAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAAGTGAGCTCTGCAAGCTaGCACAGGCCGGGTGCCGAT +
Preference number: 4 (lower is better)
Translates to: ETILIPTDPYDQVLTDIQVSSAS*HRPGAD
Trigger: ATCGGCACCCGGCCTGTGCCAGCTTGCAGAGCTCAC...TTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338895.7
ENST00000468793.5
ENST00000491998.5
CDS-3UTR CCA 90 bp GGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACATGTCCTCAAGCCCTCTaGGTCCCACAGGCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GLENSSFTWFNVIAVQQTCPQAL*VPQAVA
Trigger: TGCCACCGCCTGTGGGACCCAGAGGGCTTGAGGACA...TGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATCCGCGCTCAGGGAGCTaGAAGCGGAGACAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDPRSGS*KRRQPL
Trigger: CAAGGGCTGTCTCCGCTTCCAGCTCCCTGAGCGCGG...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGCGTTGTCGGGAACACTaGGGAAGTAATCTTCCGTCA +
Preference number: 4 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWRCREH*GSNLPS
Trigger: TGACGGAAGATTACTTCCCCAGTGTTCCCGACAACG...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CTGATGTCGCTCACATCTGCCACCAATGGGACAAACAAAAGGTGCCGGTCCAGCCACATCTGCCACCAATaGGACAAACAAAAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: LMSLTSATNGTNKRCRSSHICHQ*DKQKVP
Trigger: CGGCACCTTTTGTTTGTCCCATTGGTGGCAGATGTG...GCTGGACCGGCACCTTTTGTTTGTCCCATTGGTGGCAGATGTGAGCGACATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339350.7
ENST00000378206.5
CDS-3UTR CCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAAGCTGCTGGGCGGCCTaGATGAGCCCCACCTGTGGC +
Preference number: 4 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTSCWAA*MSPTCG
Trigger: GCCACAGGTGGGGCTCATCCAGGCCGCCCAGCAGCT...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATGGCGGCTGCCGCCCTTaGCTCCTCTGTCGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDGGCRP*LLCRSS
Trigger: GCTACTTCGACAGAGGAGCCAAGGGCGGCAGCCGCC...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp GGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACACCCACCTGTGGCTCGTaGAATGCACTGAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: GLENSSFTWFNVIAVQQTPTCGS*NALRKR
Trigger: GCGCTTCCTCAGTGCATTTCACGAGCCACAGGTGGG...TGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACCCGCGATGTTCTGGCTaGCGTTGTGCAGGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDPRCSG*RCAGGQ
Trigger: CTGACCTCCTGCACAACGTCAGCCAGAACATCGCGG...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACACACCTGCTGCCCAGCTaGTCAGATCCGTCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTHLLPS*SDPSSP
Trigger: GGGCGAGGACGGATCTGAGCAGCTGGGCAGCAGGTG...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAAGCGGAGACAGCCCTTaGGCAGCACCTCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTSGDSP*AAPPGS
Trigger: GCTGCCAGGAGGTGCTGCGCAAGGGCTGTCTCCGCT...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGACTCTGTCGAAGTAGCTaGCATTGTACTGCATGGACC +
Preference number: 4 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRLCRSS*HCTAWT
Trigger: GGTCCATGCAGTACAATGGCAGCTACTTCGACAGAG...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp CTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCTGAGAGGCGGAGGTTaGAGTGAGCCAAGATTGCAT +
Preference number: 4 (lower is better)
Translates to: LIPTDPYDQVLTDIQRVPLRGGG*SEPRLH
Trigger: ATGCAATCTTGGCTCACTGCAACCTCCGCCTCTCAG...GGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACATCCAGACCGTCTCTGTaGACCCGCCACCCACACGGC +
Preference number: 4 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTSRPSL*TRHPHG
Trigger: GCCGTGTGGGTGGCGGGTGCACAGAGACGGTCTGGA...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATTGTCCTCAAGCCCTCTaGGTCCCACAGGCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDCPQAL*VPQAVA
Trigger: TGCCACCGCCTGTGGGACCCAGAGGGCTTGAGGACA...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACACCGCGCTCAGGGAGCTaGAAGCGGAGACAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTPRSGS*KRRQPL
Trigger: CAAGGGCTGTCTCCGCTTCCAGCTCCCTGAGCGCGG...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGGCGGCTGCCGCCCTTaGCTCCTCTGTCGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTGGCRP*LLCRSS
Trigger: GCTACTTCGACAGAGGAGCCAAGGGCGGCAGCCGCC...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CCAGAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCGTAATCCCAGCACTTTaGGAGACCGAGGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PETILIPTDPYDQVLTDIVIPAL*ETEAGR
Trigger: TCTGCCCGCCTCGGTCTCCCAAAGTGCTGGGATTAC...GATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGGGGTCTGCACCTGGTaGGCTCTGCAAGCTGGCACA +
Preference number: 4 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTGVCTW*ALQAGT
Trigger: TGTGCCAGCTTGCAGAGCTCACCAGGTGCAGACCCC...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp CCAGAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCACCAGGACTCAGACTTaGGGTGTCCCGGGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: PETILIPTDPYDQVLTDITRTQT*GVPGLC
Trigger: ACAAAGACCCGGGACACCTCAAGTCTGAGTCCTGGT...GATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339350.7
CDS-3UTR GCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACCCGGGTCTTTGTCCTTaGCCTGACACCAACAGAGCC +
Preference number: 4 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDPGLCP*PDTNRA
Trigger: GGCTCTGTTGGTGTCAGGGCAAGGACAAAGACCCGG...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339350.7
CDS-3UTR CCA 90 bp CTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCGTTGTCGGGAACACTaGGGAAGTAATCTTCCGTCA +
Preference number: 4 (lower is better)
Translates to: LIPTDPYDQVLTDIQRVPRCREH*GSNLPS
Trigger: TGACGGAAGATTACTTCCCCAGTGTTCCCGACAACG...GGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCACATCTGCCACCAATaGGACAAACAAAAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: LIPTDPYDQVLTDIQRVPHICHQ*DKQKVP
Trigger: CGGCACCTTTTGTTTGTCCCATTGGTGGCAGATGTG...GGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
CDS-3UTR CCA 90 bp CCAGAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCGATGAGCCCCACCTGTaGCTCGTGAAATGCACTGAG +
Preference number: 4 (lower is better)
Translates to: PETILIPTDPYDQVLTDIDEPHL*LVKCTE
Trigger: CTCAGTGCATTTCACGAGCCACAGGTGGGGCTCATC...GATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCTCACAGTTGAGCTTGTaGGTGGTTTTCTTATGGCAG +
Preference number: 4 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVSQLSL*VVFLWQ
Trigger: CTGCCATAAGAAAACCACCCACAAGCTCAACTGTGA...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CTGATGTCGCTCACATCTGCCACCAATGGGACAAACAAAAGGTGCCGGTCCAGCTCACAGTTGAGCTTGTaGGTGGTTTTCTTATGGCAG +
Preference number: 4 (lower is better)
Translates to: LMSLTSATNGTNKRCRSSSQLSL*VVFLWQ
Trigger: CTGCCATAAGAAAACCACCCACAAGCTCAACTGTGA...GCTGGACCGGCACCTTTTGTTTGTCCCATTGGTGGCAGATGTGAGCGACATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339350.7
ENST00000378206.5
CDS-3UTR CCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACGTGTGTACGTGTCACTaGCGTTTCCGCACAGGCTGC +
Preference number: 4 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDVCTCH*RFRTGC
Trigger: GCAGCCTGTGCGGAAACGCCAGTGACACGTACACAC...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp GAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAAGTAATCCCAGCACTTTaGGAGACCGAGGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: ETILIPTDPYDQVLTDIQVIPAL*ETEAGR
Trigger: TCTGCCCGCCTCGGTCTCCCAAAGTGCTGGGATTAC...TTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACGTAATCCCAGCACTTTaGGAGACCGAGGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDVIPAL*ETEAGR
Trigger: TCTGCCCGCCTCGGTCTCCCAAAGTGCTGGGATTAC...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACACCCACCTGTGGCTCGTaGAATGCACTGAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTPTCGS*NALRKR
Trigger: GCGCTTCCTCAGTGCATTTCACGAGCCACAGGTGGG...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCGCTGGGCGGCCTGGATaGGCCCCACCTGTGGCTCGT +
Preference number: 4 (lower is better)
Translates to: CKCIRLNHEINDRSPFLAAGRPG*APPVAR
Trigger: ACGAGCCACAGGTGGGGCTCATCCAGGCCGCCCAGC...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGTTCTTTTCTATTATGTaGTCCAGGTTCCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWFFSIM*SRFQVL
Trigger: CAGCACCTGGAACCTGGATCACATAATAGAAAAGAA...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
CDS-3UTR TCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGGCGGGCAGATCACCTaGGGTCAGGAGTTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTGGQIT*GQEFEN
Trigger: GTTCTCGAACTCCTGACCTCAGGTGATCTGCCCGCC...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp GAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACCCACACGGCTGACATaGGCTCCATATGATCCGAGA +
Preference number: 4 (lower is better)
Translates to: ETILIPTDPYDQVLTDIQPTRLT*APYDPR
Trigger: TCTCGGATCATATGGAGCTCATGTCAGCCGTGTGGG...TTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp GGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACACCCACACGGCTGACATaGGCTCCATATGATCCGAGA +
Preference number: 4 (lower is better)
Translates to: GLENSSFTWFNVIAVQQTPTRLT*APYDPR
Trigger: TCTCGGATCATATGGAGCTCATGTCAGCCGTGTGGG...TGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACGATGAGCCCCACCTGTaGCTCGTGAAATGCACTGAG +
Preference number: 4 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDDEPHL*LVKCTE
Trigger: CTCAGTGCATTTCACGAGCCACAGGTGGGGCTCATC...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACTGCCATTGTACTGCATaGACCGGAGCCTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDCHCTA*TGASGT
Trigger: TGTGCCAGAGGCTCCGGTCCATGCAGTACAATGGCA...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACATGTCAAAGGGACCCTaGCAGGAGAACCAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDMSKGP*QENQPS
Trigger: GGAAGGCTGGTTCTCCTGCCAGGGTCCCTTTGACAT...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGTGGGTGGTTTTCTTATaGCAGACAATGTGCACTAGT +
Preference number: 4 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWWVVFL*QTMCTS
Trigger: ACTAGTGCACATTGTCTGCCATAAGAAAACCACCCA...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CTGATGTCGCTCACATCTGCCACCAATGGGACAAACAAAAGGTGCCGGTCCAGCTTTGTAGATTCTGCTTaGGTCACAGTTGAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: LMSLTSATNGTNKRCRSSFVDSA*VTVELV
Trigger: CACAAGCTCAACTGTGACCCAAGCAGAATCTACAAA...GCTGGACCGGCACCTTTTGTTTGTCCCATTGGTGGCAGATGTGAGCGACATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339350.7
ENST00000378206.5
CDS-3UTR CCA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCTTTGTAGATTCTGCTTaGGTCACAGTTGAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVFVDSA*VTVELV
Trigger: CACAAGCTCAACTGTGACCCAAGCAGAATCTACAAA...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATGTAATCCCAGCACTTTaGGAGACCGAGGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDVIPAL*ETEAGR
Trigger: TCTGCCCGCCTCGGTCTCCCAAAGTGCTGGGATTAC...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACAGAATCGCTTTAACCTaGGAGGCAGAGGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDRIALT*EAEGAG
Trigger: CCCTGCACCCTCTGCCTCCCAGGTTAAAGCGATTCT...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468793.5
CDS-3UTR TCA 90 bp GGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACAGGTGACCACATTACATaGGCAAACCCAACGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GLENSSFTWFNVIAVQQTGDHIT*ANPTLV
Trigger: CACCAGCGTTGGGTTTGCTCATGTAATGTGGTCACC...TGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp GAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAAGGTGACCACATTACATaGGCAAACCCAACGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ETILIPTDPYDQVLTDIQGDHIT*ANPTLV
Trigger: CACCAGCGTTGGGTTTGCTCATGTAATGTGGTCACC...TTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATCCCACACGGCTGACATaGGCTCCATATGATCCGAGA +
Preference number: 4 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDPTRLT*APYDPR
Trigger: TCTCGGATCATATGGAGCTCATGTCAGCCGTGTGGG...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp GGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACAGGGACAAACAAAAGGTaGCGGTCCAGCAGAAGACAC +
Preference number: 4 (lower is better)
Translates to: GLENSSFTWFNVIAVQQTGTNKR*RSSRRH
Trigger: GTGTCTTCTGCTGGACCGGCACCTTTTGTTTGTCCC...TGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
CDS-3UTR GCA 90 bp GAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAAGCAGTGAGCCAAGATTaGATCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ETILIPTDPYDQVLTDIQAVSQD*ITALQP
Trigger: AGGCTGGAGTGCAGTGATGCAATCTTGGCTCACTGC...TTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACGCAGTGAGCCAAGATTaGATCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDAVSQD*ITALQP
Trigger: AGGCTGGAGTGCAGTGATGCAATCTTGGCTCACTGC...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACCTGAGAGGCGGAGGTTaGAGTGAGCCAAGATTGCAT +
Preference number: 4 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDLRGGG*SEPRLH
Trigger: ATGCAATCTTGGCTCACTGCAACCTCCGCCTCTCAG...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp GAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACTGAGAGGCGGAGGTTaGAGTGAGCCAAGATTGCAT +
Preference number: 4 (lower is better)
Translates to: ETILIPTDPYDQVLTDIQLRGGG*SEPRLH
Trigger: ATGCAATCTTGGCTCACTGCAACCTCCGCCTCTCAG...TTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCGATCCGTCCTCGCCCTaGCCGCAGGGGTCTGCACCT +
Preference number: 4 (lower is better)
Translates to: CKCIRLNHEINDRSPFLADPSSP*PQGSAP
Trigger: AGGTGCAGACCCCTGCGGCCAGGGCGAGGACGGATC...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp GAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAAACGCTCTTGGGCTTCTaGAGCATTGCAGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: ETILIPTDPYDQVLTDIQTLLGF*SIADVL
Trigger: GAGGACATCTGCAATGCTCCAGAAGCCCAAGAGCGT...TTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp GGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACAACGCTCTTGGGCTTCTaGAGCATTGCAGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: GLENSSFTWFNVIAVQQTTLLGF*SIADVL
Trigger: GAGGACATCTGCAATGCTCCAGAAGCCCAAGAGCGT...TGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCTTGCGCAGCACCTCCTaGCAGCTCCGGCCAGCCACG +
Preference number: 4 (lower is better)
Translates to: CKCIRLNHEINDRSPFLALRSTS*QLRPAT
Trigger: CGTGGCTGGCCGGAGCTGCCAGGAGGTGCTGCGCAA...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CCAGAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCGTTGTCGGGAACACTaGGGAAGTAATCTTCCGTCA +
Preference number: 4 (lower is better)
Translates to: PETILIPTDPYDQVLTDIRCREH*GSNLPS
Trigger: TGACGGAAGATTACTTCCCCAGTGTTCCCGACAACG...GATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATGATGAGCCCCACCTGTaGCTCGTGAAATGCACTGAG +
Preference number: 4 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDDEPHL*LVKCTE
Trigger: CTCAGTGCATTTCACGAGCCACAGGTGGGGCTCATC...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATTGCCATTGTACTGCATaGACCGGAGCCTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDCHCTA*TGASGT
Trigger: TGTGCCAGAGGCTCCGGTCCATGCAGTACAATGGCA...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATATGTCAAAGGGACCCTaGCAGGAGAACCAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDMSKGP*QENQPS
Trigger: GGAAGGCTGGTTCTCCTGCCAGGGTCCCTTTGACAT...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGATGGGTGGTTTTCTTATaGCAGACAATGTGCACTAGT +
Preference number: 4 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRWVVFL*QTMCTS
Trigger: ACTAGTGCACATTGTCTGCCATAAGAAAACCACCCA...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGATTTGTAGATTCTGCTTaGGTCACAGTTGAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRFVDSA*VTVELV
Trigger: CACAAGCTCAACTGTGACCCAAGCAGAATCTACAAA...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp GGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACAACAAAGACCAGGACGTaGTGTGTACGTGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: GLENSSFTWFNVIAVQQTTKTRT*CVRVTG
Trigger: GCCAGTGACACGTACACACCACGTCCTGGTCTTTGT...TGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGATCGCTCACCATTTTTaGCCTAGAAAACAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWIAHHF*PRKQQF
Trigger: AAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAAAAAGCCTGAAACTGTaGCACAGTTTTGCACTATGT +
Preference number: 4 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRKSLKL*HSFALC
Trigger: ACATAGTGCAAAACTGTGTCACAGTTTCAGGCTTTT...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACACCCACACGGCTGACATaGGCTCCATATGATCCGAGA +
Preference number: 4 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTPTRLT*APYDPR
Trigger: TCTCGGATCATATGGAGCTCATGTCAGCCGTGTGGG...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp GGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACAAAGACTCCATCTATGTaGTCCAGGTTCCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GLENSSFTWFNVIAVQQTKTPSM*SRFQVL
Trigger: CAGCACCTGGAACCTGGATCACATAGATGGAGTCTT...TGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491998.5
CDS-3UTR GCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCAGCGGAGACAGCCCTTaGGCAGCACCTCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: CKCIRLNHEINDRSPFLASGDSP*AAPPGS
Trigger: GCTGCCAGGAGGTGCTGCGCAAGGGCTGTCTCCGCT...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATGGGACAAACAAAAGGTaGCGGTCCAGCAGAAGACAC +
Preference number: 4 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDGTNKR*RSSRRH
Trigger: GTGTCTTCTGCTGGACCGGCACCTTTTGTTTGTCCC...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
CDS-3UTR GCA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATGCAGTGAGCCAAGATTaGATCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDAVSQD*ITALQP
Trigger: AGGCTGGAGTGCAGTGATGCAATCTTGGCTCACTGC...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCTCCAGACCGTCTCTGTaGACCCGCCACCCACACGGC +
Preference number: 4 (lower is better)
Translates to: CKCIRLNHEINDRSPFLASRPSL*TRHPHG
Trigger: GCCGTGTGGGTGGCGGGTGCACAGAGACGGTCTGGA...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACCGTTGTCGGGAACACTaGGGAAGTAATCTTCCGTCA +
Preference number: 4 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDRCREH*GSNLPS
Trigger: TGACGGAAGATTACTTCCCCAGTGTTCCCGACAACG...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp GGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACACGTTGTCGGGAACACTaGGGAAGTAATCTTCCGTCA +
Preference number: 4 (lower is better)
Translates to: GLENSSFTWFNVIAVQQTRCREH*GSNLPS
Trigger: TGACGGAAGATTACTTCCCCAGTGTTCCCGACAACG...TGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp GAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACACATCTGCCACCAATaGGACAAACAAAAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: ETILIPTDPYDQVLTDIQHICHQ*DKQKVP
Trigger: CGGCACCTTTTGTTTGTCCCATTGGTGGCAGATGTG...TTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
CDS-3UTR CCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACATGCCATTGTACTGCATaGACCGGAGCCTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTCHCTA*TGASGT
Trigger: TGTGCCAGAGGCTCCGGTCCATGCAGTACAATGGCA...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCGGCGGCTGCCGCCCTTaGCTCCTCTGTCGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: CKCIRLNHEINDRSPFLAGGCRP*LLCRSS
Trigger: GCTACTTCGACAGAGGAGCCAAGGGCGGCAGCCGCC...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAATCGCTCACCATTTTTaGCCTAGAAAACAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRIAHHF*PRKQQF
Trigger: AAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp GGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACAGATGTCGCTCACATCTaGCACCAATGGGACAAACAA +
Preference number: 4 (lower is better)
Translates to: GLENSSFTWFNVIAVQQTDVAHI*HQWDKQ
Trigger: TTGTTTGTCCCATTGGTGGCAGATGTGAGCGACATC...TGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
CDS-3UTR GCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGCAGTGAGCCAAGATTaGATCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTAVSQD*ITALQP
Trigger: AGGCTGGAGTGCAGTGATGCAATCTTGGCTCACTGC...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCTGTCCTCAAGCCCTCTaGGTCCCACAGGCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: CKCIRLNHEINDRSPFLACPQAL*VPQAVA
Trigger: TGCCACCGCCTGTGGGACCCAGAGGGCTTGAGGACA...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATCGTTGTCGGGAACACTaGGGAAGTAATCTTCCGTCA +
Preference number: 4 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDRCREH*GSNLPS
Trigger: TGACGGAAGATTACTTCCCCAGTGTTCCCGACAACG...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp CCAGAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCTCACAGTTGAGCTTGTaGGTGGTTTTCTTATGGCAG +
Preference number: 4 (lower is better)
Translates to: PETILIPTDPYDQVLTDISQLSL*VVFLWQ
Trigger: CTGCCATAAGAAAACCACCCACAAGCTCAACTGTGA...GATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCCTGGCACAGGCCGGGTaGCGATCCCGGAAACTACAT +
Preference number: 4 (lower is better)
Translates to: CKCIRLNHEINDRSPFLALAQAG*RSRKLH
Trigger: ATGTAGTTTCCGGGATCGGCACCCGGCCTGTGCCAG...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338895.7
ENST00000491998.5
CDS-3UTR GCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACACTCTGTCGAAGTAGCTaGCATTGTACTGCATGGACC +
Preference number: 4 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTLCRSS*HCTAWT
Trigger: GGTCCATGCAGTACAATGGCAGCTACTTCGACAGAG...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACTTCTTTTCTATTATGTaGTCCAGGTTCCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDFFSIM*SRFQVL
Trigger: CAGCACCTGGAACCTGGATCACATAATAGAAAAGAA...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
CDS-3UTR CCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACTGGGTGGTTTTCTTATaGCAGACAATGTGCACTAGT +
Preference number: 4 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDWVVFL*QTMCTS
Trigger: ACTAGTGCACATTGTCTGCCATAAGAAAACCACCCA...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp GAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAATTTGTAGATTCTGCTTaGGTCACAGTTGAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: ETILIPTDPYDQVLTDIQFVDSA*VTVELV
Trigger: CACAAGCTCAACTGTGACCCAAGCAGAATCTACAAA...TTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCGTGTGTACGTGTCACTaGCGTTTCCGCACAGGCTGC +
Preference number: 4 (lower is better)
Translates to: CKCIRLNHEINDRSPFLAVCTCH*RFRTGC
Trigger: GCAGCCTGTGCGGAAACGCCAGTGACACGTACACAC...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAAGTGTGAGACTATCCTaGGAAACATGGCGAAACCAG +
Preference number: 4 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTSVRLS*ETWRNQ
Trigger: CTGGTTTCGCCATGTTTCCCAGGATAGTCTCACACT...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477548.5
CDS-3UTR TCA 90 bp GAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAAAAAAGCCTGAAACTGTaGCACAGTTTTGCACTATGT +
Preference number: 4 (lower is better)
Translates to: ETILIPTDPYDQVLTDIQKSLKL*HSFALC
Trigger: ACATAGTGCAAAACTGTGTCACAGTTTCAGGCTTTT...TTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp GGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACAAAAAGCCTGAAACTGTaGCACAGTTTTGCACTATGT +
Preference number: 4 (lower is better)
Translates to: GLENSSFTWFNVIAVQQTKSLKL*HSFALC
Trigger: ACATAGTGCAAAACTGTGTCACAGTTTCAGGCTTTT...TGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACAAAAGCCTGAAACTGTaGCACAGTTTTGCACTATGT +
Preference number: 4 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDKSLKL*HSFALC
Trigger: ACATAGTGCAAAACTGTGTCACAGTTTCAGGCTTTT...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACATCACAGTTGAGCTTGTaGGTGGTTTTCTTATGGCAG +
Preference number: 4 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTSQLSL*VVFLWQ
Trigger: CTGCCATAAGAAAACCACCCACAAGCTCAACTGTGA...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp GAGACAATTCTTATCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAAATCGCTCACCATTTTTaGCCTAGAAAACAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: ETILIPTDPYDQVLTDIQIAHHF*PRKQQF
Trigger: AAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT...TTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGATAAGAATTGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACATCGCTCACCATTTTTaGCCTAGAAAACAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: WPRKQQFHVVQRDSCSTDIAHHF*PRKQQF
Trigger: AAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT...GTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACATTCTTTTCTATTATGTaGTCCAGGTTCCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTFFSIM*SRFQVL
Trigger: CAGCACCTGGAACCTGGATCACATAATAGAAAAGAA...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
CDS-3UTR CCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCACGCTCTTGGGCTTCTaGAGCATTGCAGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: CKCIRLNHEINDRSPFLATLLGF*SIADVL
Trigger: GAGGACATCTGCAATGCTCCAGAAGCCCAAGAGCGT...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCACAAAGACCAGGACGTaGTGTGTACGTGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: CKCIRLNHEINDRSPFLATKTRT*CVRVTG
Trigger: GCCAGTGACACGTACACACCACGTCCTGGTCTTTGT...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAAAAAGCCTGAAACTGTaGCACAGTTTTGCACTATGT +
Preference number: 4 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTKSLKL*HSFALC
Trigger: ACATAGTGCAAAACTGTGTCACAGTTTCAGGCTTTT...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCCTCTGTCGAAGTAGCTaGCATTGTACTGCATGGACC +
Preference number: 4 (lower is better)
Translates to: CKCIRLNHEINDRSPFLALCRSS*HCTAWT
Trigger: GGTCCATGCAGTACAATGGCAGCTACTTCGACAGAG...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAATCGCTCACCATTTTTaGCCTAGAAAACAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: FWPRKQQFHVVQRDSCSTIAHHF*PRKQQF
Trigger: AAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT...TGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR GCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCGATGTCGCTCACATCTaGCACCAATGGGACAAACAA +
Preference number: 4 (lower is better)
Translates to: CKCIRLNHEINDRSPFLADVAHI*HQWDKQ
Trigger: TTGTTTGTCCCATTGGTGGCAGATGTGAGCGACATC...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
CDS-3UTR CCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCTTTGTAGATTCTGCTTaGGTCACAGTTGAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: CKCIRLNHEINDRSPFLAFVDSA*VTVELV
Trigger: CACAAGCTCAACTGTGACCCAAGCAGAATCTACAAA...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR TCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCAAAAGCCTGAAACTGTaGCACAGTTTTGCACTATGT +
Preference number: 4 (lower is better)
Translates to: CKCIRLNHEINDRSPFLAKSLKL*HSFALC
Trigger: ACATAGTGCAAAACTGTGTCACAGTTTCAGGCTTTT...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CCA 90 bp TGTAAATGTATCAGGTTGAATCATGAAATAAATGATCGCTCACCATTTTTGGCCATCGCTCACCATTTTTaGCCTAGAAAACAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: CKCIRLNHEINDRSPFLAIAHHF*PRKQQF
Trigger: AAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT...GGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTGATACATTTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS TCA 90 bp CTGCTCAGATCCGTCCTCGCCCTGGCCGCAGGGGTCTGCACCTGGTaGGCTCTGCAAGCTGGCACAGGCCGGGTGCCGATCCCGGAAACT +
Preference number: 5 (lower is better)
Translates to: LLRSVLALAAGVCTW*ALQAGTGRVPIPET
Trigger: AGTTTCCGGGATCGGCACCCGGCCTGTGCCAGCTTGCAGAGCTCACCAGGTGCAGACCCCTGCGGCCAGGGCGAGGACGGATCTGAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338895.7
ENST00000468793.5
ENST00000491998.5
ENST00000625756.2
CDS GCA 90 bp GATCCGTCCTCGCCCTGGCCGCAGGGGTCTGCACCTGGTGAGCTCTaGAAGCTGGCACAGGCCGGGTGCCGATCCCGGAAACTACATTAC +
Preference number: 5 (lower is better)
Translates to: DPSSPWPQGSAPGEL*KLAQAGCRSRKLHY
Trigger: GTAATGTAGTTTCCGGGATCGGCACCCGGCCTGTGCCAGCTTGCAGAGCTCACCAGGTGCAGACCCCTGCGGCCAGGGCGAGGACGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338895.7
ENST00000491998.5
ENST00000625756.2
CDS CCA 90 bp TCAGGAAAGCAAAGGCGCGACGCCACCTGGTGTGCCCAGGTGCCGTaGCCCCGGAAACTACACAACCCTGAGGGCCAGAGTAGCGGAGCC +
Preference number: 5 (lower is better)
Translates to: SGKQRRDATWCAQVP*PRKLHNPEGQSSGA
Trigger: GGCTCCGCTACTCTGGCCCTCAGGGTTGTGTAGTTTCCGGGGCCACGGCACCTGGGCACACCAGGTGGCGTCGCGCCTTTGCTTTCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338895.7
ENST00000625756.2
CDS CCA 90 bp CCTCGCCCTGGCCGCAGGGGTCTGCACCTGGTGAGCTCTGCAAGCTaGCACAGGCCGGGTGCCGATCCCGGAAACTACATTACCCAGAAG +
Preference number: 5 (lower is better)
Translates to: PRPGRRGLHLVSSAS*HRPGADPGNYITQK
Trigger: CTTCTGGGTAATGTAGTTTCCGGGATCGGCACCCGGCCTGTGCCAGCTTGCAGAGCTCACCAGGTGCAGACCCCTGCGGCCAGGGCGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338895.7
ENST00000491998.5
ENST00000625756.2
CDS GCA 90 bp AAGGCTCAGGAAAGCAAAGGCGCGACGCCACCTGGTGTGCCCAGGTaGCGTGGCCCCGGAAACTACACAACCCTGAGGGCCAGAGTAGCG +
Preference number: 5 (lower is better)
Translates to: KAQESKGATPPGVPR*RGPGNYTTLRARVA
Trigger: CGCTACTCTGGCCCTCAGGGTTGTGTAGTTTCCGGGGCCACGGCACCTGGGCACACCAGGTGGCGTCGCGCCTTTGCTTTCCTGAGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338895.7
ENST00000491998.5
ENST00000625756.2
CDS GCA 90 bp CGGCGTTGTCGGGAACACTGGGGAAGTAATCTTCCGTCAGCTCCGTaGCATCCTCGTACAGGCACAGCCGGGAACCGCGCTCAGGGAGCT +
Preference number: 5 (lower is better)
Translates to: RRCREHWGSNLPSAP*HPRTGTAGNRAQGA
Trigger: AGCTCCCTGAGCGCGGTTCCCGGCTGTGCCTGTACGAGGATGGCACGGAGCTGACGGAAGATTACTTCCCCAGTGTTCCCGACAACGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
ENST00000625756.2
CDS-3UTR CAA 90 bp CTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCAGGCCCGACGCGGTCTaGTGCGCAGGCGTCGCCCCA +
Preference number: 5 (lower is better)
Translates to: LTRMTRYSQTSNEYPRAVRPDAV*CAGVAP
Trigger: TGGGGCGACGCCTGCGCACAAGACCGCGTCGGGCCT...GACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338895.7
ENST00000491998.5
CDS-3UTR CAA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAAGGCCCGACGCGGTCTaGTGCGCAGGCGTCGCCCCA +
Preference number: 5 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRRPDAV*CAGVAP
Trigger: TGGGGCGACGCCTGCGCACAAGACCGCGTCGGGCCT...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338895.7
ENST00000491998.5
CDS GCA 90 bp CATTACCCAGAAGGCCTGGGAAAAGTGAGGCCCGACGCGGTCTTGTaGGCAGGCGTCGCCCCACGGACACCACATTACCTTACTCAGAAG +
Preference number: 5 (lower is better)
Translates to: HYPEGLGKVRPDAVL*AGVAPRTPHYLTQK
Trigger: CTTCTGAGTAAGGTAATGTGGTGTCCGTGGGGCGACGCCTGCGCACAAGACCGCGTCGGGCCTCACTTTTCCCAGGCCTTCTGGGTAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338895.7
ENST00000491998.5
ENST00000625756.2
CDS CCA 90 bp TTACCTTACTCAGAAGGCTCAGGAAAGCAAAGGCGCGACGCCACCTaGTGTGCCCAGGTGCCGTGGCCCCGGAAACTACACAACCCTGAG +
Preference number: 5 (lower is better)
Translates to: LPYSEGSGKQRRDAT*CAQVPWPRKLHNPE
Trigger: CTCAGGGTTGTGTAGTTTCCGGGGCCACGGCACCTGGGCACACCAGGTGGCGTCGCGCCTTTGCTTTCCTGAGCCTTCTGAGTAAGGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338895.7
ENST00000491998.5
ENST00000625756.2
CDS-3UTR CAA 90 bp CGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAGCTGTCCTCTGGAGCACCAGCTCGGCGTaGTCGGGAACACTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: RMTRYSQTSNEYPRAVLWSTSSA*SGTLGK
Trigger: CTTCCCCAGTGTTCCCGACAACGCCGAGCTGGTGCT...CCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CAA 90 bp TCCCTACTGACCCGTATGACCAGGTACTCACAGACATCCAACGAGTACCCCAGAAGCACCAGCTCGGCGTaGTCGGGAACACTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: SLLTRMTRYSQTSNEYPRSTSSA*SGTLGK
Trigger: CTTCCCCAGTGTTCCCGACAACGCCGAGCTGGTGCT...TCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGGTCATACGGGTCAGTAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS GCA 90 bp CGCCTGATGTCGCTCACATCTGCCACCAATGGGACAAACAAAAGGTaGCGGTCCAGCAGAAGACACATCCTGCCCCGGTCACAAGAAGAG +
Preference number: 5 (lower is better)
Translates to: RLMSLTSATNGTNKR*RSSRRHILPRSQEE
Trigger: CTCTTCTTGTGACCGGGGCAGGATGTGTCTTCTGCTGGACCGGCACCTTTTGTTTGTCCCATTGGTGGCAGATGTGAGCGACATCAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339350.7
CDS GCA 90 bp CGCCTGATGTCGCTCACATCTGCCACCAATGGGACAAACAAAAGGTaGCGGTCCAGCAGAAGACACATCCTCCAAAGTCCTTGCCACTCA +
Preference number: 5 (lower is better)
Translates to: RLMSLTSATNGTNKR*RSSRRHILQSPCHS
Trigger: TGAGTGGCAAGGACTTTGGAGGATGTGTCTTCTGCTGGACCGGCACCTTTTGTTTGTCCCATTGGTGGCAGATGTGAGCGACATCAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338895.7
CDS-3UTR CAA 90 bp GGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATAGCTGTTCAACAGACAAGCACCAGCTCGGCGTaGTCGGGAACACTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: GLENSSFTWFNVIAVQQTSTSSA*SGTLGK
Trigger: CTTCCCCAGTGTTCCCGACAACGCCGAGCTGGTGCT...TGTCTGTTGAACAGCTATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
CDS-3UTR CAA 90 bp ATCGCTCACCATTTTTGGCCTAGAAAACAGCAGTTTCACGTGGTTCAACGTGATCACCAGGACTCAGACTaGAGGTGTCCCGGGTCTTTG +
Preference number: 5 (lower is better)
Translates to: IAHHFWPRKQQFHVVQRDHQDSD*RCPGSL
Trigger: CAAAGACCCGGGACACCTCAAGTCTGAGTCCTGGTG...ATCACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339350.7
CDS CAA 72 bp GAACCGCGCTCAGGGAGCTGGAAGCGGAGACAGCCCTaGCGCAGCACCTCCTGGCAGCTCCGGCCAGCCACG +
Preference number: 6 (lower is better)
Translates to: EPRSGSWKRRQP*RSTSWQLRPAT
Trigger: CGTGGCTGGCCGGAGCTGCCAGGAGGTGCTGCGCAAGGGCTGTCTCCGCTTCCAGCTCCCTGAGCGCGGTTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
ENST00000625756.2
CDS CCA 72 bp CAAAGGCGCGACGCCACCTGGTGTGCCCAGGTGCCGTaGCCCCGGAAACTACACAACCCTGAGGGCCAGAGT +
Preference number: 6 (lower is better)
Translates to: QRRDATWCAQVP*PRKLHNPEGQS
Trigger: ACTCTGGCCCTCAGGGTTGTGTAGTTTCCGGGGCCACGGCACCTGGGCACACCAGGTGGCGTCGCGCCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338895.7
ENST00000491998.5
ENST00000625756.2
CDS GCA 72 bp AGGCTCAGGAAAGCAAAGGCGCGACGCCACCTGGTGTaGCCAGGTGCCGTGGCCCCGGAAACTACACAACCC +
Preference number: 6 (lower is better)
Translates to: RLRKAKARRHLV*PGAVAPETTQP
Trigger: GGGTTGTGTAGTTTCCGGGGCCACGGCACCTGGGCACACCAGGTGGCGTCGCGCCTTTGCTTTCCTGAGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338895.7
ENST00000491998.5
ENST00000625756.2
CDS CAA 72 bp CCAGAAGGCCTGGGAAAAGTGAGGCCCGACGCGGTCTaGTGCGCAGGCGTCGCCCCACGGACACCACATTAC +
Preference number: 6 (lower is better)
Translates to: PEGLGKVRPDAV*CAGVAPRTPHY
Trigger: GTAATGTGGTGTCCGTGGGGCGACGCCTGCGCACAAGACCGCGTCGGGCCTCACTTTTCCCAGGCCTTCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338895.7
ENST00000491998.5
ENST00000625756.2
CDS GCA 72 bp GAAGGCCTGGGAAAAGTGAGGCCCGACGCGGTCTTGTaGGCAGGCGTCGCCCCACGGACACCACATTACCTT +
Preference number: 6 (lower is better)
Translates to: EGLGKVRPDAVL*AGVAPRTPHYL
Trigger: AAGGTAATGTGGTGTCCGTGGGGCGACGCCTGCGCACAAGACCGCGTCGGGCCTCACTTTTCCCAGGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338895.7
ENST00000491998.5
ENST00000625756.2
CDS CCA 72 bp TCAGAAGGCTCAGGAAAGCAAAGGCGCGACGCCACCTaGTGTGCCCAGGTGCCGTGGCCCCGGAAACTACAC +
Preference number: 6 (lower is better)
Translates to: SEGSGKQRRDAT*CAQVPWPRKLH
Trigger: GTGTAGTTTCCGGGGCCACGGCACCTGGGCACACCAGGTGGCGTCGCGCCTTTGCTTTCCTGAGCCTTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338895.7
ENST00000491998.5
ENST00000625756.2
CDS GCA 72 bp CGGGAACACTGGGGAAGTAATCTTCCGTCAGCTCCGTaGCATCCTCGTACAGGCACAGCCGGGAACCGCGCT +
Preference number: 6 (lower is better)
Translates to: REHWGSNLPSAP*HPRTGTAGNRA
Trigger: AGCGCGGTTCCCGGCTGTGCCTGTACGAGGATGGCACGGAGCTGACGGAAGATTACTTCCCCAGTGTTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000338895.7
ENST00000339350.7
ENST00000378206.5
ENST00000378209.8
ENST00000468793.5
ENST00000475969.5
ENST00000477548.5
ENST00000491998.5
ENST00000625756.2
CDS CAA 90 bp CTACATTACCCAGAAGGCCTGGGAAAAGTGAGGCCCGACGCGGTCTaGTGCGCAGGCGTCGCCCCACGGACACCACATTACCTTACTCAG +
Preference number: 6 (lower is better)
Translates to: LHYPEGLGKVRPDAV*CAGVAPRTPHYLTQ
Trigger: CTGAGTAAGGTAATGTGGTGTCCGTGGGGCGACGCCTGCGCACAAGACCGCGTCGGGCCTCACTTTTCCCAGGCCTTCTGGGTAATGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338895.7
ENST00000491998.5
ENST00000625756.2
CDS TCA 72 bp ATTCCCCAGGGCCTGGCAATCACCAGGACTCAGACTTaGGGTGTCCCGGGTCTTTGTCCTTGCCCTGACACC +
Preference number: 6 (lower is better)
Translates to: IPQGLAITRTQT*GVPGLCPCPDT
Trigger: GGTGTCAGGGCAAGGACAAAGACCCGGGACACCTCAAGTCTGAGTCCTGGTGATTGCCAGGCCCTGGGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339350.7
CDS GCA 72 bp TCGCTCACATCTGCCACCAATGGGACAAACAAAAGGTaGCGGTCCAGCAGAAGACACATCCTGCCCCGGTCA +
Preference number: 6 (lower is better)
Translates to: SLTSATNGTNKR*RSSRRHILPRS
Trigger: TGACCGGGGCAGGATGTGTCTTCTGCTGGACCGGCACCTTTTGTTTGTCCCATTGGTGGCAGATGTGAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339350.7
CDS GCA 72 bp TCGCTCACATCTGCCACCAATGGGACAAACAAAAGGTaGCGGTCCAGCAGAAGACACATCCTCCAAAGTCCT +
Preference number: 6 (lower is better)
Translates to: SLTSATNGTNKR*RSSRRHILQSP
Trigger: AGGACTTTGGAGGATGTGTCTTCTGCTGGACCGGCACCTTTTGTTTGTCCCATTGGTGGCAGATGTGAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338895.7