RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DEXI (Homo sapiens)

Ensembl gene IDs: ENSG00000182108

Ensembl transcript IDs: ENST00000469379.5, ENST00000570440.2

Found 377 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCTGTGGTGCCTTCTCCCGAGGACCTAAGAGCCCCCTGAGCGCTTaGAAACACTGCAGACAAAGCGAGCCCTGGCACCAGCTCCCTGCC +
Preference number: 1 (lower is better)
Translates to: PCGAFSRGPKSPLSA*KHCRQSEPWHQLPA
Trigger: GGCAGGGAGCTGGTGCCAGGGCTCGCTTTGTCTGCAGTGTTTGCAAGCGCTCAGGGGGCTCTTAGGTCCTCGGGAGAAGGCACCACAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 90 bp GATGGGGAGCCCTCACTGGAGGCACCCCTCAAACCCTCAGTGCTGTaGCCAGGGAACCGGGCTGGCAGTCTTAGTTGGCTTTGTTCCCTC +
Preference number: 1 (lower is better)
Translates to: DGEPSLEAPLKPSVL*PGNRAGSLSWLCSL
Trigger: GAGGGAACAAAGCCAACTAAGACTGCCAGCCCGGTTCCCTGGCCACAGCACTGAGGGTTTGAGGGGTGCCTCCAGTGAGGGCTCCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 90 bp CAGACAAAGCGAGCCCTGGCACCAGCTCCCTGCCTGCCTGTTCTGTaGAGGGAGCCTACAAAACTGGCAGCCCCTGCAGTTCTGAGCTGC +
Preference number: 1 (lower is better)
Translates to: QTKRALAPAPCLPVL*REPTKLAAPAVLSC
Trigger: GCAGCTCAGAACTGCAGGGGCTGCCAGTTTTGTAGGCTCCCTTCACAGAACAGGCAGGCAGGGAGCTGGTGCCAGGGCTCGCTTTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 90 bp TGCAATGACCCTGTGGTGCCTTCTCCCGAGGACCTAAGAGCCCCCTaGGCGCTTGCAAACACTGCAGACAAAGCGAGCCCTGGCACCAGC +
Preference number: 1 (lower is better)
Translates to: CNDPVVPSPEDLRAP*ALANTADKASPGTS
Trigger: GCTGGTGCCAGGGCTCGCTTTGTCTGCAGTGTTTGCAAGCGCTCAGGGGGCTCTTAGGTCCTCGGGAGAAGGCACCACAGGGTCATTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 90 bp CCCTCGTCACAGCCCCAAAGACAGGACTTGACCATCTCAGTGCAATaGCCCTGTGGTGCCTTCTCCCGAGGACCTAAGAGCCCCCTGAGC +
Preference number: 1 (lower is better)
Translates to: PSSQPQRQDLTISVQ*PCGAFSRGPKSPLS
Trigger: GCTCAGGGGGCTCTTAGGTCCTCGGGAGAAGGCACCACAGGGTCATTGCACTGAGATGGTCAAGTCCTGTCTTTGGGGCTGTGACGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 90 bp TGCAAACACTGCAGACAAAGCGAGCCCTGGCACCAGCTCCCTGCCTaGCTGTTCTGTGAAGGGAGCCTACAAAACTGGCAGCCCCTGCAG +
Preference number: 1 (lower is better)
Translates to: CKHCRQSEPWHQLPA*LFCEGSLQNWQPLQ
Trigger: CTGCAGGGGCTGCCAGTTTTGTAGGCTCCCTTCACAGAACAGGCAGGCAGGGAGCTGGTGCCAGGGCTCGCTTTGTCTGCAGTGTTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 90 bp AAGAGCCCCCTGAGCGCTTGCAAACACTGCAGACAAAGCGAGCCCTaGCACCAGCTCCCTGCCTGCCTGTTCTGTGAAGGGAGCCTACAA +
Preference number: 1 (lower is better)
Translates to: KSPLSACKHCRQSEP*HQLPACLFCEGSLQ
Trigger: TTGTAGGCTCCCTTCACAGAACAGGCAGGCAGGGAGCTGGTGCCAGGGCTCGCTTTGTCTGCAGTGTTTGCAAGCGCTCAGGGGGCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 90 bp GGCTATGTGGCAGGAGGGTCTCTACCTTATCTCAGAATGAAGGCATaGCTGGGGTCTGGCTGTCTCCTGGTGGCCGGAAGGAGACAGACG +
Preference number: 1 (lower is better)
Translates to: GYVAGGSLPYLRMKA*LGSGCLLVAGRRQT
Trigger: CGTCTGTCTCCTTCCGGCCACCAGGAGACAGCCAGACCCCAGCCATGCCTTCATTCTGAGATAAGGTAGAGACCCTCCTGCCACATAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469379.5
3UTR CCA 90 bp CAGGTCCTCCATGGTATGGCTCCCACCCACCTCACTGACCTTTCCTaGGGCTGTTCTCCAGCCACATGGGCCTCCTTTTGGTTGCGGAAA +
Preference number: 1 (lower is better)
Translates to: QVLHGMAPTHLTDLS*GCSPATWASFWLRK
Trigger: TTTCCGCAACCAAAAGGAGGCCCATGTGGCTGGAGAACAGCCCCAGGAAAGGTCAGTGAGGTGGGTGGGAGCCATACCATGGAGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 90 bp AAACCCTCAGTGCTGTGGCCAGGGAACCGGGCTGGCAGTCTTAGTTaGCTTTGTTCCCTCGGCCTCCACTTCCCCATTCTGTGCCTCCAT +
Preference number: 1 (lower is better)
Translates to: KPSVLWPGNRAGSLS*LCSLGLHFPILCLH
Trigger: ATGGAGGCACAGAATGGGGAAGTGGAGGCCGAGGGAACAAAGCCAACTAAGACTGCCAGCCCGGTTCCCTGGCCACAGCACTGAGGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 90 bp AATAGGCCTGGCAGAAACTATGAGCTGGTGTTCCAAGGTCGGGGATaGGGAGCCCTCACTGGAGGCACCCCTCAAACCCTCAGTGCTGTG +
Preference number: 1 (lower is better)
Translates to: NRPGRNYELVFQGRG*GALTGGTPQTLSAV
Trigger: CACAGCACTGAGGGTTTGAGGGGTGCCTCCAGTGAGGGCTCCCCATCCCCGACCTTGGAACACCAGCTCATAGTTTCTGCCAGGCCTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 90 bp CTGCACCAGGACAAGCTGACTCTGGTGGCAACGTTCTCCAGTCTCTaGATTTTCAGCTCGCTGTGTGCCAAGAGAGGGCTGGCAGGTACC +
Preference number: 1 (lower is better)
Translates to: LHQDKLTLVATFSSL*IFSSLCAKRGLAGT
Trigger: GGTACCTGCCAGCCCTCTCTTGGCACACAGCGAGCTGAAAATGCAGAGACTGGAGAACGTTGCCACCAGAGTCAGCTTGTCCTGGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 90 bp AGGCAGGCTGGGGAGGTGTGCAGAGCACCTGGCACACACTCCCCCTaGCACTTGGTTCTCGCTAAGATGTTACTGAGCTCAACTGAAGCT +
Preference number: 1 (lower is better)
Translates to: RQAGEVCRAPGTHSP*HLVLAKMLLSSTEA
Trigger: AGCTTCAGTTGAGCTCAGTAACATCTTAGCGAGAACCAAGTGCCAGGGGGAGTGTGTGCCAGGTGCTCTGCACACCTCCCCAGCCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 90 bp CCATTGTCTGTCTCTTGCTTAGATGACAGCCACAGCTTCCTGGCCTaGTTTCCTGCATCCGCCCTGACCCCTGGCTGTGGGATCTCCCAT +
Preference number: 1 (lower is better)
Translates to: PLSVSCLDDSHSFLA*FPASALTPGCGISH
Trigger: ATGGGAGATCCCACAGCCAGGGGTCAGGGCGGATGCAGGAAACCAGGCCAGGAAGCTGTGGCTGTCATCTAAGCAAGAGACAGACAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 90 bp ATGCTGGATGCAAAGCTCCCTCGTCACAGCCCCAAAGACAGGACTTaGCCATCTCAGTGCAATGACCCTGTGGTGCCTTCTCCCGAGGAC +
Preference number: 1 (lower is better)
Translates to: MLDAKLPRHSPKDRT*PSQCNDPVVPSPED
Trigger: GTCCTCGGGAGAAGGCACCACAGGGTCATTGCACTGAGATGGTCAAGTCCTGTCTTTGGGGCTGTGACGAGGGAGCTTTGCATCCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 90 bp GGCCTCCCCACTTCCCAGGGTCAGGCCCTGACACCCCGAGAGCTTTaGAAGGGTGTCCCTGAGAGATATTTCCTGGTGTTTCTGCTTAAA +
Preference number: 1 (lower is better)
Translates to: GLPTSQGQALTPREL*KGVPERYFLVFLLK
Trigger: TTTAAGCAGAAACACCAGGAAATATCTCTCAGGGACACCCTTGCAAAGCTCTCGGGGTGTCAGGGCCTGACCCTGGGAAGTGGGGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 90 bp AGCCCTTTCTCCTGGGAAGGAGGGAGCTCCCGATTCCCCATTCCCTaGTCCTGGGCAACAATTAACACTCTAGGAAAACCACAGAGCCGG +
Preference number: 1 (lower is better)
Translates to: SPFSWEGGSSRFPIP*SWATINTLGKPQSR
Trigger: CCGGCTCTGTGGTTTTCCTAGAGTGTTAATTGTTGCCCAGGAGCAGGGAATGGGGAATCGGGAGCTCCCTCCTTCCCAGGAGAAAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 90 bp AGTTGGAAGAGTGCGTATGAAATAGGCCTGGCAGAAACTATGAGCTaGTGTTCCAAGGTCGGGGATGGGGAGCCCTCACTGGAGGCACCC +
Preference number: 1 (lower is better)
Translates to: SWKSAYEIGLAETMS*CSKVGDGEPSLEAP
Trigger: GGGTGCCTCCAGTGAGGGCTCCCCATCCCCGACCTTGGAACACCAGCTCATAGTTTCTGCCAGGCCTATTTCATACGCACTCTTCCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 90 bp GCCTGGGGGTATACTTGCCTCCCTGTGTCACCATTGTCTGTCTCTTaGTTAGATGACAGCCACAGCTTCCTGGCCTGGTTTCCTGCATCC +
Preference number: 1 (lower is better)
Translates to: AWGYTCLPVSPLSVS*LDDSHSFLAWFPAS
Trigger: GGATGCAGGAAACCAGGCCAGGAAGCTGTGGCTGTCATCTAAGCAAGAGACAGACAATGGTGACACAGGGAGGCAAGTATACCCCCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 90 bp GTATACTTGCCTCCCTGTGTCACCATTGTCTGTCTCTTGCTTAGATaGCAGCCACAGCTTCCTGGCCTGGTTTCCTGCATCCGCCCTGAC +
Preference number: 1 (lower is better)
Translates to: VYLPPCVTIVCLLLR*QPQLPGLVSCIRPD
Trigger: GTCAGGGCGGATGCAGGAAACCAGGCCAGGAAGCTGTGGCTGTCATCTAAGCAAGAGACAGACAATGGTGACACAGGGAGGCAAGTATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 90 bp CCTGGACCTTCATTTCCCTACCTCTCACATACACAGTGGGCTGGATaGTGGATGCAAAGCTCCCTCGTCACAGCCCCAAAGACAGGACTT +
Preference number: 1 (lower is better)
Translates to: PGPSFPYLSHTQWAG*WMQSSLVTAPKTGL
Trigger: AAGTCCTGTCTTTGGGGCTGTGACGAGGGAGCTTTGCATCCAGCATCCAGCCCACTGTGTATGTGAGAGGTAGGGAAATGAAGGTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 90 bp CCTAAAGGAGCCCTTGCCCACCATATCTCAGCATCCCCTCTTCATTaGCACTTAGACCCTGTGCCCAGTGACACTCCAGTACTGTCCAGT +
Preference number: 1 (lower is better)
Translates to: PKGALAHHISASPLH*HLDPVPSDTPVLSS
Trigger: ACTGGACAGTACTGGAGTGTCACTGGGCACAGGGTCTAAGTGGCAATGAAGAGGGGATGCTGAGATATGGTGGGCAAGGGCTCCTTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 90 bp GGACCTTCATTTCCCTACCTCTCACATACACAGTGGGCTGGATGCTaGATGCAAAGCTCCCTCGTCACAGCCCCAAAGACAGGACTTGAC +
Preference number: 1 (lower is better)
Translates to: GPSFPYLSHTQWAGC*MQSSLVTAPKTGLD
Trigger: GTCAAGTCCTGTCTTTGGGGCTGTGACGAGGGAGCTTTGCATCCAGCATCCAGCCCACTGTGTATGTGAGAGGTAGGGAAATGAAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 90 bp GGGATCTCCCATAACTCAAATCTGACTGTGTCCCTGTGGAAGGTTTaGGTTTCTGACCTGGGCAGCTCTATGTCCGGCACAGGGGTTCTG +
Preference number: 1 (lower is better)
Translates to: GISHNSNLTVSLWKV*VSDLGSSMSGTGVL
Trigger: CAGAACCCCTGTGCCGGACATAGAGCTGCCCAGGTCAGAAACCCAAACCTTCCACAGGGACACAGTCAGATTTGAGTTATGGGAGATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 90 bp CTTCATTTCCCTACCTCTCACATACACAGTGGGCTGGATGCTGGATaGAAAGCTCCCTCGTCACAGCCCCAAAGACAGGACTTGACCATC +
Preference number: 1 (lower is better)
Translates to: LHFPTSHIHSGLDAG*KAPSSQPQRQDLTI
Trigger: GATGGTCAAGTCCTGTCTTTGGGGCTGTGACGAGGGAGCTTTGCATCCAGCATCCAGCCCACTGTGTATGTGAGAGGTAGGGAAATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 90 bp ACTGCTTCAAAGTCAAATGCTTGGCTTGGAGACAGGGATTTATCTTaGGATCGCAGGCCCTTAGCACACGGCCTGGCAGAAGAGCAGGCA +
Preference number: 1 (lower is better)
Translates to: TASKSNAWLGDRDLS*DRRPLAHGLAEEQA
Trigger: TGCCTGCTCTTCTGCCAGGCCGTGTGCTAAGGGCCTGCGATCCCAAGATAAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGAAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 90 bp TCTGGTGGCAACGTTCTCCAGTCTCTGCATTTTCAGCTCGCTGTGTaGCAAGAGAGGGCTGGCAGGTACCAGCAGCTTTCACTTTCATTA +
Preference number: 1 (lower is better)
Translates to: SGGNVLQSLHFQLAV*QERAGRYQQLSLSL
Trigger: TAATGAAAGTGAAAGCTGCTGGTACCTGCCAGCCCTCTCTTGGCACACAGCGAGCTGAAAATGCAGAGACTGGAGAACGTTGCCACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 90 bp ATAGCAGCAAACCCAAGGCCAAAAGGAAGTACGGGCTTCTTTGCTTaGGATTTCTCCTCTCACAGCTTTGGCCTAGAGCCCCTGCACTTA +
Preference number: 1 (lower is better)
Translates to: IAANPRPKGSTGFFA*DFSSHSFGLEPLHL
Trigger: TAAGTGCAGGGGCTCTAGGCCAAAGCTGTGAGAGGAGAAATCGCAAGCAAAGAAGCCCGTACTTCCTTTTGGCCTTGGGTTTGCTGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 90 bp AAAATGGGAATGGGATTGTGTCATCTCCTGCCTAGAACCTTCCAATaGCTTTCCACTGCTCTTGGCTATGGCCTTCCAGGTCCTCCATGG +
Preference number: 1 (lower is better)
Translates to: KMGMGLCHLLPRTFQ*LSTALGYGLPGPPW
Trigger: CCATGGAGGACCTGGAAGGCCATAGCCAAGAGCAGTGGAAAGCCATTGGAAGGTTCTAGGCAGGAGATGACACAATCCCATTCCCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 90 bp TGGAATAAGATAGACCAATGCATCGATAACCCTCAGCTCCAAATCTaGGCTGCACCAGGACAAGCTGACTCTGGTGGCAACGTTCTCCAG +
Preference number: 1 (lower is better)
Translates to: WNKIDQCIDNPQLQI*AAPGQADSGGNVLQ
Trigger: CTGGAGAACGTTGCCACCAGAGTCAGCTTGTCCTGGTGCAGCTCAGATTTGGAGCTGAGGGTTATCGATGCATTGGTCTATCTTATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 90 bp ACGTTCCTCACCAAGTTACACTGCTTCAAAGTCAAATGCTTGGCTTaGAGACAGGGATTTATCTTGGGATCGCAGGCCCTTAGCACACGG +
Preference number: 1 (lower is better)
Translates to: TFLTKLHCFKVKCLA*RQGFILGSQALSTR
Trigger: CCGTGTGCTAAGGGCCTGCGATCCCAAGATAAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGAAGCAGTGTAACTTGGTGAGGAACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 90 bp ACCTACAGAGACCGTCTACTAGAGGCCAGGCACAGTTTTAAGTGTTaGGGACATGGCAGTGAACACAACAGGGAAGCTCATGTCCTTCTT +
Preference number: 1 (lower is better)
Translates to: TYRDRLLEARHSFKC*GHGSEHNREAHVLL
Trigger: AAGAAGGACATGAGCTTCCCTGTTGTGTTCACTGCCATGTCCTCAACACTTAAAACTGTGCCTGGCCTCTAGTAGACGGTCTCTGTAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 90 bp ATAAGACGTTCCTCACCAAGTTACACTGCTTCAAAGTCAAATGCTTaGCTTGGAGACAGGGATTTATCTTGGGATCGCAGGCCCTTAGCA +
Preference number: 1 (lower is better)
Translates to: IRRSSPSYTASKSNA*LGDRDLSWDRRPLA
Trigger: TGCTAAGGGCCTGCGATCCCAAGATAAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGAAGCAGTGTAACTTGGTGAGGAACGTCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 90 bp GCTTGGTCTGTCTTGTTCACTGTGTTCAATCACCAGGCACTGTACTaGACCAACAAGCATTCATTCTGTAAAAGAACGGACGGATGGATG +
Preference number: 1 (lower is better)
Translates to: AWSVLFTVFNHQALY*TNKHSFCKRTDGWM
Trigger: CATCCATCCGTCCGTTCTTTTACAGAATGAATGCTTGTTGGTTCAGTACAGTGCCTGGTGATTGAACACAGTGAACAAGACAGACCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 90 bp AATCTGATTCTCTTGTTTGGGTTCCTACTAGTCTTCCTCACCAAGTaGCAAAGGGCCAAGGCTTGGTCTGTCTTGTTCACTGTGTTCAAT +
Preference number: 1 (lower is better)
Translates to: NLILLFGFLLVFLTK*QRAKAWSVLFTVFN
Trigger: ATTGAACACAGTGAACAAGACAGACCAAGCCTTGGCCCTTTGGCACTTGGTGAGGAAGACTAGTAGGAACCCAAACAAGAGAATCAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 90 bp GAAATCTCCAGTTTGTATAATTCAGGGCTAAGAGAGCAGGACTCTTaGCATCTCACTGTCTTGAGACACATACTGGGGTTTTCTCCTGTC +
Preference number: 1 (lower is better)
Translates to: EISSLYNSGLREQDS*HLTVLRHILGFSPV
Trigger: GACAGGAGAAAACCCCAGTATGTGTCTCAAGACAGTGAGATGTCAAGAGTCCTGCTCTCTTAGCCCTGAATTATACAAACTGGAGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 90 bp CTTTCAGAAGTTCTGGGAGGAAAGCTAGCAGATAAACCAGAAATATaGATATCCAAATTGAGAGAAGCCCTCACTTTCTTAGTTCGGCAA +
Preference number: 1 (lower is better)
Translates to: LSEVLGGKLADKPEI*ISKLREALTFLVRQ
Trigger: TTGCCGAACTAAGAAAGTGAGGGCTTCTCTCAATTTGGATATTCATATTTCTGGTTTATCTGCTAGCTTTCCTCCCAGAACTTCTGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 90 bp GTGTCCCTGAGAGATATTTCCTGGTGTTTCTGCTTAAACAGCGTTTaGTGCAAAATATGTCGAAGCATTTGGGATTCAGTTTTTAGTTCA +
Preference number: 1 (lower is better)
Translates to: VSLRDISWCFCLNSV*CKICRSIWDSVFSS
Trigger: TGAACTAAAAACTGAATCCCAAATGCTTCGACATATTTTGCAGCAAACGCTGTTTAAGCAGAAACACCAGGAAATATCTCTCAGGGACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CAA 90 bp CTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCTCCCTaGCTAGCGCCCCAACCCGCCCTCATCCTGTTCAGAGAGGGCACT +
Preference number: 2 (lower is better)
Translates to: LREGCVSGLGIPPSP*LAPQPALILFREGT
Trigger: AGTGCCCTCTCTGAACAGGATGAGGGCGGGTTGGGGCGCTAGCAAGGGAGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR TCA 90 bp TTCCTCGGCACTTGGGGGCAAGGCCTCCTTGGCTTGGATTTGAGGGTGGGGAGGTCCAGTCTCAGGGGCTaGGCCAAGGCGTTCCTGCCT +
Preference number: 2 (lower is better)
Translates to: FLGTWGQGLLGLDLRVGRSSLRG*AKAFLP
Trigger: AGGCAGGAACGCCTTGGCTCAGCCCCTGAGACTGGA...CCTCCCCACCCTCAAATCCAAGCCAAGGAGGCCTTGCCCCCAAGTGCCGAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR TCA 90 bp GGCCTGGAGATGAGGCTCGGTCAGATCATCTTGAGGTCTTTCCTGGCGGCTTCCCCCAGGGTCAGGCCCTaGCACCCCGAGAGCTTTGCA +
Preference number: 2 (lower is better)
Translates to: GLEMRLGQIILRSFLAASPRVRP*HPESFA
Trigger: TGCAAAGCTCTCGGGGTGTCAGGGCCTGACCCTGGG...GGAAGCCGCCAGGAAAGACCTCAAGATGATCTGACCGAGCCTCATCTCCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp CTAGGAAAACCACAGAGCCGGCTATCCAGGGTTCTGGTGCCCTGGGGACCACAGAGACAAAGCGAGCCCTaGCACCAGCTCCCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: LGKPQSRLSRVLVPWGPQRQSEP*HQLPAC
Trigger: GCAGGCAGGGAGCTGGTGCCAGGGCTCGCTTTGTCT...CTGTGGTCCCCAGGGCACCAGAACCCTGGATAGCCGGCTCTGTGGTTTTCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR TCA 90 bp GGAACCGGGCTGGCAGTCTTAGTTGGCTTTGTTCCCTCGGCCTCCACTTCCCCACATACCCTGGGGTTCTaGGCTTCCTCGGCACTTGGG +
Preference number: 2 (lower is better)
Translates to: GTGLAVLVGFVPSASTSPHTLGF*ASSALG
Trigger: CCCAAGTGCCGAGGAAGCTCAGAACCCCAGGGTATG...TGGGGAAGTGGAGGCCGAGGGAACAAAGCCAACTAAGACTGCCAGCCCGGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp CTCCACGCTGGTGACAGGCTATGTGGCAGGAGGGTCTCTACCTTATCTCAGAATGGCATGGCTGGGGTCTaGCTGTCTCCTGGTGGCCGG +
Preference number: 2 (lower is better)
Translates to: LHAGDRLCGRRVSTLSQNGMAGV*LSPGGR
Trigger: CCGGCCACCAGGAGACAGCCAGACCCCAGCCATGCC...ATTCTGAGATAAGGTAGAGACCCTCCTGCCACATAGCCTGTCACCAGCGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469379.5
3UTR-3UTR CCA 90 bp TTCCTCGGCACTTGGGGGCAAGGCCTCCTTGGCTTGGATTTGAGGGTGGGGAGGGCTTTCCACTGCTCTTaGCTATGGCCTTCCAGGTCC +
Preference number: 2 (lower is better)
Translates to: FLGTWGQGLLGLDLRVGRAFHCS*LWPSRS
Trigger: GGACCTGGAAGGCCATAGCCAAGAGCAGTGGAAAGC...CCTCCCCACCCTCAAATCCAAGCCAAGGAGGCCTTGCCCCCAAGTGCCGAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR TCA 90 bp GGCCTGGAGATGAGGCTCGGTCAGATCATCTTGAGGTCTTTCCTGGCGGCTTCCAGGTCTTGGCACCACTaGTTCCCTCAGCCTGGACTG +
Preference number: 2 (lower is better)
Translates to: GLEMRLGQIILRSFLAASRSWHH*FPQPGL
Trigger: CAGTCCAGGCTGAGGGAATCAGTGGTGCCAAGACCT...GGAAGCCGCCAGGAAAGACCTCAAGATGATCTGACCGAGCCTCATCTCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR GCA 90 bp GGACCACAGGGCAGCAAGAAAGTTCTCCTAAGGGTCCTGGGGCTGGGAAGGCAGACACCCCGAGAGCTTTaGAAGGGTGTCCCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: GPQGSKKVLLRVLGLGRQTPREL*KGVPER
Trigger: TCTCTCAGGGACACCCTTGCAAAGCTCTCGGGGTGT...CTGCCTTCCCAGCCCCAGGACCCTTAGGAGAACTTTCTTGCTGCCCTGTGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR GCA 90 bp GGAACCGGGCTGGCAGTCTTAGTTGGCTTTGTTCCCTCGGCCTCCACTTCCCCACCTCTGCACCAGAACTaGTGGGACGTGAAGACTCTC +
Preference number: 2 (lower is better)
Translates to: GTGLAVLVGFVPSASTSPPLHQN*WDVKTL
Trigger: GAGAGTCTTCACGTCCCAGCAGTTCTGGTGCAGAGG...TGGGGAAGTGGAGGCCGAGGGAACAAAGCCAACTAAGACTGCCAGCCCGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp TTCCTCGGCACTTGGGGGCAAGGCCTCCTTGGCTTGGATTTGAGGGTGGGGAGGAAGGTGATTCGTGCCTaGCTCCCTGTGTCTTCTGAC +
Preference number: 2 (lower is better)
Translates to: FLGTWGQGLLGLDLRVGRKVIRA*LPVSSD
Trigger: GTCAGAAGACACAGGGAGCCAGGCACGAATCACCTT...CCTCCCCACCCTCAAATCCAAGCCAAGGAGGCCTTGCCCCCAAGTGCCGAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp GGCCTGGAGATGAGGCTCGGTCAGATCATCTTGAGGTCTTTCCTGGCGGCTTCCAGTGCAATGACCCTGTaGTGCCTTCTCCCGAGGACC +
Preference number: 2 (lower is better)
Translates to: GLEMRLGQIILRSFLAASSAMTL*CLLPRT
Trigger: GGTCCTCGGGAGAAGGCACCACAGGGTCATTGCACT...GGAAGCCGCCAGGAAAGACCTCAAGATGATCTGACCGAGCCTCATCTCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CAA 90 bp AGAGGTGGCCAGGCCTGGGGGTATACTTGCCTCCCTGTGTCACCATaGTCTGTCTCTTGCTTAGATGACAGCCACAGCTTCCTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: RGGQAWGYTCLPVSP*SVSCLDDSHSFLAW
Trigger: CCAGGCCAGGAAGCTGTGGCTGTCATCTAAGCAAGAGACAGACAATGGTGACACAGGGAGGCAAGTATACCCCCAGGCCTGGCCACCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR TCA 90 bp CAATGGCTTTCCACTGCTCTTGGCTATGGCCTTCCAGGTCCTCCATGGTATGGCAACGGAGGAGAAGCCTaGGGGAGGGGTGTGTATCCG +
Preference number: 2 (lower is better)
Translates to: QWLSTALGYGLPGPPWYGNGGEA*GRGVYP
Trigger: CGGATACACACCCCTCCCTCAGGCTTCTCCTCCGTT...GCCATACCATGGAGGACCTGGAAGGCCATAGCCAAGAGCAGTGGAAAGCCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR GCA 90 bp GGAACCGGGCTGGCAGTCTTAGTTGGCTTTGTTCCCTCGGCCTCCACTTCCCCAAAAACTGGCAGCCCCTaGAGTTCTGAGCTGCAGAAC +
Preference number: 2 (lower is better)
Translates to: GTGLAVLVGFVPSASTSPKTGSP*SSELQN
Trigger: GTTCTGCAGCTCAGAACTGCAGGGGCTGCCAGTTTT...TGGGGAAGTGGAGGCCGAGGGAACAAAGCCAACTAAGACTGCCAGCCCGGTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR GCA 90 bp CATCCAAGCCTCTGTCACCTCTGGCCTGGACAACTAACAGCATCTGAGGTGGTGCACCAGCTCCCTGCCTaGCTGTTCTGTGAAGGGAGC +
Preference number: 2 (lower is better)
Translates to: HPSLCHLWPGQLTASEVVHQLPA*LFCEGS
Trigger: GCTCCCTTCACAGAACAGGCAGGCAGGGAGCTGGTG...CACCACCTCAGATGCTGTTAGTTGTCCAGGCCAGAGGTGACAGAGGCTTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR GCA 90 bp CAATGGCTTTCCACTGCTCTTGGCTATGGCCTTCCAGGTCCTCCATGGTATGGCCAAGGCGTTCCTGCCTaGCCTGTGACCCTCACCAGA +
Preference number: 2 (lower is better)
Translates to: QWLSTALGYGLPGPPWYGQGVPA*PVTLTR
Trigger: TCTGGTGAGGGTCACAGGGCAGGCAGGAACGCCTTG...GCCATACCATGGAGGACCTGGAAGGCCATAGCCAAGAGCAGTGGAAAGCCATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR GCA 90 bp AGAAATCTCACTGTGAACCCATTAGGAGAGCCCTCTGCCGCCAGCTATGCTGTCGAGCCAAGGCGTTCCTaGCTGCCCTGTGACCCTCAC +
Preference number: 2 (lower is better)
Translates to: RNLTVNPLGEPSAASYAVEPRRS*LPCDPH
Trigger: GTGAGGGTCACAGGGCAGGCAGGAACGCCTTGGCTC...GACAGCATAGCTGGCGGCAGAGGGCTCTCCTAATGGGTTCACAGTGAGATTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR GCA 90 bp TGGTTGTCTTGGCAAAGCCAGGTAATGCAGGAGAGGGGTGGACTCAGCCTGCTTGGGCTGGATGCTGGATaGAAAGCTCCCTCGTCACAG +
Preference number: 2 (lower is better)
Translates to: WLSWQSQVMQERGGLSLLGLDAG*KAPSSQ
Trigger: CTGTGACGAGGGAGCTTTGCATCCAGCATCCAGCCC...AAGCAGGCTGAGTCCACCCCTCTCCTGCATTACCTGGCTTTGCCAAGACAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp GGAACCGGGCTGGCAGTCTTAGTTGGCTTTGTTCCCTCGGCCTCCACTTCCCCACTGACTGTGTCCCTGTaGAAGGTTTGGGTTTCTGAC +
Preference number: 2 (lower is better)
Translates to: GTGLAVLVGFVPSASTSPLTVSL*KVWVSD
Trigger: GTCAGAAACCCAAACCTTCCACAGGGACACAGTCAG...TGGGGAAGTGGAGGCCGAGGGAACAAAGCCAACTAAGACTGCCAGCCCGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR TCA 90 bp CTAGGAAAACCACAGAGCCGGCTATCCAGGGTTCTGGTGCCCTGGGGACCACAGTCTGTTATAGCAGACTaGACTAAGACACCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: LGKPQSRLSRVLVPWGPQSVIAD*TKTPSA
Trigger: GGCAGAGGGTGTCTTAGTTCAGTCTGCTATAACAGA...CTGTGGTCCCCAGGGCACCAGAACCCTGGATAGCCGGCTCTGTGGTTTTCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR TCA 90 bp GGAACCGGGCTGGCAGTCTTAGTTGGCTTTGTTCCCTCGGCCTCCACTTCCCCACACCAGGCACTGTACTaGACCAACAAGCATTCATTC +
Preference number: 2 (lower is better)
Translates to: GTGLAVLVGFVPSASTSPHQALY*TNKHSF
Trigger: GAATGAATGCTTGTTGGTTCAGTACAGTGCCTGGTG...TGGGGAAGTGGAGGCCGAGGGAACAAAGCCAACTAAGACTGCCAGCCCGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR TCA 90 bp TTCCTCGGCACTTGGGGGCAAGGCCTCCTTGGCTTGGATTTGAGGGTGGGGAGGAGGGTCAAAGTCTGTTaGATGAGTGAGTGCATATGC +
Preference number: 2 (lower is better)
Translates to: FLGTWGQGLLGLDLRVGRRVKVC*MSECIC
Trigger: GCATATGCACTCACTCATTCAACAGACTTTGACCCT...CCTCCCCACCCTCAAATCCAAGCCAAGGAGGCCTTGCCCCCAAGTGCCGAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR GCA 90 bp AGGAGGGTCTCTACCTTATCTCAGAATGAAGGCATGGCTGGGGTCTGGCTGTCTGTCCAGGGCATGGGTTaGGGATCGTGTAGGGAAGAG +
Preference number: 2 (lower is better)
Translates to: RRVSTLSQNEGMAGVWLSVQGMG*GSCREE
Trigger: CTCTTCCCTACACGATCCGCAACCCATGCCCTGGAC...AGACAGCCAGACCCCAGCCATGCCTTCATTCTGAGATAAGGTAGAGACCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469379.5
3UTR-3UTR GCA 90 bp CTCCACGCTGGTGACAGGCTATGTGGCAGGAGGGTCTCTACCTTATCTCAGAATGAAGCTGCCTGTCTCTaGACAGGTCCATGTCCAGGC +
Preference number: 2 (lower is better)
Translates to: LHAGDRLCGRRVSTLSQNEAACL*TGPCPG
Trigger: GCCTGGACATGGACCTGTGCAGAGACAGGCAGCTTC...ATTCTGAGATAAGGTAGAGACCCTCCTGCCACATAGCCTGTCACCAGCGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469379.5
3UTR-3UTR GCA 90 bp CAATGGCTTTCCACTGCTCTTGGCTATGGCCTTCCAGGTCCTCCATGGTATGGCATTAGGAGAGCCCTCTaGCGCCAGCTATGCTGTCAG +
Preference number: 2 (lower is better)
Translates to: QWLSTALGYGLPGPPWYGIRRAL*RQLCCQ
Trigger: CTGACAGCATAGCTGGCGGCAGAGGGCTCTCCTAAT...GCCATACCATGGAGGACCTGGAAGGCCATAGCCAAGAGCAGTGGAAAGCCATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp GTTTTCTCCTGTCTGAAGACGCAGCTGGCACCAATGTACCCTATGGCCAAGGACAGGTCCTCCATGGTATaGCTCCCACCCACCTCACTG +
Preference number: 2 (lower is better)
Translates to: VFSCLKTQLAPMYPMAKDRSSMV*LPPTSL
Trigger: CAGTGAGGTGGGTGGGAGCCATACCATGGAGGACCT...GTCCTTGGCCATAGGGTACATTGGTGCCAGCTGCGTCTTCAGACAGGAGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CAA 90 bp CACTGCTTCAAAGTCAAATGCTTGGCTTGGAGACAGGGATTTATCTaGGGATCGCAGGCCCTTAGCACACGGCCTGGCAGAAGAGCAGGC +
Preference number: 2 (lower is better)
Translates to: HCFKVKCLAWRQGFI*GSQALSTRPGRRAG
Trigger: GCCTGCTCTTCTGCCAGGCCGTGTGCTAAGGGCCTGCGATCCCAAGATAAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGAAGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR TCA 90 bp ATCTTCACTAAACTCCCCTCATCCAAGCCTCTGTCACCTCTGGCCTGGACAACTGCCACAGTACAAAGGTaGTTCGTGCCTGGCTCCCTG +
Preference number: 2 (lower is better)
Translates to: IFTKLPSSKPLSPLAWTTATVQR*FVPGSL
Trigger: CAGGGAGCCAGGCACGAATCACCTTTGTACTGTGGC...AGTTGTCCAGGCCAGAGGTGACAGAGGCTTGGATGAGGGGAGTTTAGTGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR TCA 90 bp CAATGGCTTTCCACTGCTCTTGGCTATGGCCTTCCAGGTCCTCCATGGTATGGCTGCCTGCCTGTTCTGTaGAGGGAGCCTACAAAACTG +
Preference number: 2 (lower is better)
Translates to: QWLSTALGYGLPGPPWYGCLPVL*REPTKL
Trigger: CAGTTTTGTAGGCTCCCTTCACAGAACAGGCAGGCA...GCCATACCATGGAGGACCTGGAAGGCCATAGCCAAGAGCAGTGGAAAGCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR GCA 90 bp AGAAATCTCACTGTGAACCCATTAGGAGAGCCCTCTGCCGCCAGCTATGCTGTCCCTGCAGTTCTGAGCTaGAGAACTGATGAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: RNLTVNPLGEPSAASYAVPAVLS*RTDELG
Trigger: CCCCAGCTCATCAGTTCTGCAGCTCAGAACTGCAGG...GACAGCATAGCTGGCGGCAGAGGGCTCTCCTAATGGGTTCACAGTGAGATTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR GCA 90 bp GGAACCGGGCTGGCAGTCTTAGTTGGCTTTGTTCCCTCGGCCTCCACTTCCCCACCCTGTACCACCATCTaGAACAGACTCAATGTTTGT +
Preference number: 2 (lower is better)
Translates to: GTGLAVLVGFVPSASTSPPCTTI*NRLNVC
Trigger: ACAAACATTGAGTCTGTTGCAGATGGTGGTACAGGG...TGGGGAAGTGGAGGCCGAGGGAACAAAGCCAACTAAGACTGCCAGCCCGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp TCCCCCAAAAGCCAAGGTCATCATCAAGCCAGGATGAGGACTGGAGGAGGAGCTGGCTTAAGAGGAGTCTaGCCATTCCTGGCATCCAGT +
Preference number: 2 (lower is better)
Translates to: SPKSQGHHQARMRTGGGAGLRGV*PFLASS
Trigger: ACTGGATGCCAGGAATGGCCAGACTCCTCTTAAGCC...AGCTCCTCCTCCAGTCCTCATCCTGGCTTGATGATGACCTTGGCTTTTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp ATCTTCACTAAACTCCCCTCATCCAAGCCTCTGTCACCTCTGGCCTGGACAACTAATGCAGGAGAGGGGTaGACTCAGCCTGCTTGCGGT +
Preference number: 2 (lower is better)
Translates to: IFTKLPSSKPLSPLAWTTNAGEG*TQPACG
Trigger: ACCGCAAGCAGGCTGAGTCCACCCCTCTCCTGCATT...AGTTGTCCAGGCCAGAGGTGACAGAGGCTTGGATGAGGGGAGTTTAGTGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp TGGCTCTTAACCATGACCCTAATACTGCCTCCTCAAGTAGGTGCTCAGCAAATGGGTGTGCAGAGCACCTaGCACACACTCCCCCTGGCA +
Preference number: 2 (lower is better)
Translates to: WLLTMTLILPPQVGAQQMGVQST*HTLPLA
Trigger: TGCCAGGGGGAGTGTGTGCCAGGTGCTCTGCACACC...CATTTGCTGAGCACCTACTTGAGGAGGCAGTATTAGGGTCATGGTTAAGAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp GTTTTCTCCTGTCTGAAGACGCAGCTGGCACCAATGTACCCTATGGCCAAGGACTGTTCTCCAGCCACATaGGCCTCCTTTTGGTTGCGG +
Preference number: 2 (lower is better)
Translates to: VFSCLKTQLAPMYPMAKDCSPAT*ASFWLR
Trigger: CCGCAACCAAAAGGAGGCCCATGTGGCTGGAGAACA...GTCCTTGGCCATAGGGTACATTGGTGCCAGCTGCGTCTTCAGACAGGAGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR TCA 90 bp TCACTTTCATTAGGAACCGGGACGAATAATCCAACTGAGCTGCCTCTGCACCAGGACCTAAGAGCCCCCTaGGCGCTTGCAAACACTGCA +
Preference number: 2 (lower is better)
Translates to: SLSLGTGTNNPTELPLHQDLRAP*ALANTA
Trigger: TGCAGTGTTTGCAAGCGCTCAGGGGGCTCTTAGGTC...CTGGTGCAGAGGCAGCTCAGTTGGATTATTCGTCCCGGTTCCTAATGAAAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR TCA 90 bp TGGCTCTTAACCATGACCCTAATACTGCCTCCTCAAGTAGGTGCTCAGCAAATGTCCCACCCACCTCACTaGCCTTTCCTGGGGCTGTTC +
Preference number: 2 (lower is better)
Translates to: WLLTMTLILPPQVGAQQMSHPPH*PFLGLF
Trigger: GAACAGCCCCAGGAAAGGTCAGTGAGGTGGGTGGGA...CATTTGCTGAGCACCTACTTGAGGAGGCAGTATTAGGGTCATGGTTAAGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR GCA 90 bp CAATGGCTTTCCACTGCTCTTGGCTATGGCCTTCCAGGTCCTCCATGGTATGGCGGGCCTCCTTTTGGTTaGGGAAAAACCAACTCTCTC +
Preference number: 2 (lower is better)
Translates to: QWLSTALGYGLPGPPWYGGPPFG*GKTNSL
Trigger: GAGAGAGTTGGTTTTTCCGCAACCAAAAGGAGGCCC...GCCATACCATGGAGGACCTGGAAGGCCATAGCCAAGAGCAGTGGAAAGCCATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp TCACTTTCATTAGGAACCGGGACGAATAATCCAACTGAGCTGCCTCTGCACCAGCAGTGGGCTGGATGCTaGATGCAAAGCTCCCTCGTC +
Preference number: 2 (lower is better)
Translates to: SLSLGTGTNNPTELPLHQQWAGC*MQSSLV
Trigger: GACGAGGGAGCTTTGCATCCAGCATCCAGCCCACTG...CTGGTGCAGAGGCAGCTCAGTTGGATTATTCGTCCCGGTTCCTAATGAAAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp CATCTTGAGGTCTTTCCTGGCGGCTTCCCTGCTGCTAGCTACCCCTCTCATACCAAGGCAGAGCCTTCATaGGTGGGATTAATGCCCTTA +
Preference number: 2 (lower is better)
Translates to: HLEVFPGGFPAASYPSHTKAEPS*VGLMPL
Trigger: TAAGGGCATTAATCCCACCCATGAAGGCTCTGCCTT...GGTATGAGAGGGGTAGCTAGCAGCAGGGAAGCCGCCAGGAAAGACCTCAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp TCACTTTCATTAGGAACCGGGACGAATAATCCAACTGAGCTGCCTCTGCACCAGCTCCTCTCACAGCTTTaGCCTAGAGCCCCTGCACTT +
Preference number: 2 (lower is better)
Translates to: SLSLGTGTNNPTELPLHQLLSQL*PRAPAL
Trigger: AAGTGCAGGGGCTCTAGGCCAAAGCTGTGAGAGGAG...CTGGTGCAGAGGCAGCTCAGTTGGATTATTCGTCCCGGTTCCTAATGAAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CAA 90 bp AATAGCAGCAAACCCAAGGCCAAAAGGAAGTACGGGCTTCTTTGCTaGCGATTTCTCCTCTCACAGCTTTGGCCTAGAGCCCCTGCACTT +
Preference number: 2 (lower is better)
Translates to: NSSKPKAKRKYGLLC*RFLLSQLWPRAPAL
Trigger: AAGTGCAGGGGCTCTAGGCCAAAGCTGTGAGAGGAGAAATCGCAAGCAAAGAAGCCCGTACTTCCTTTTGGCCTTGGGTTTGCTGCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CAA 90 bp TGGGTTCCTACTAGTCTTCCTCACCAAGTGCCAAAGGGCCAAGGCTaGGTCTGTCTTGTTCACTGTGTTCAATCACCAGGCACTGTACTG +
Preference number: 2 (lower is better)
Translates to: WVPTSLPHQVPKGQG*VCLVHCVQSPGTVL
Trigger: CAGTACAGTGCCTGGTGATTGAACACAGTGAACAAGACAGACCAAGCCTTGGCCCTTTGGCACTTGGTGAGGAAGACTAGTAGGAACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR TCA 90 bp GGAACCGGGCTGGCAGTCTTAGTTGGCTTTGTTCCCTCGGCCTCCACTTCCCCACATATGTTGAAACTCTaGTCCCAAATGATGGTATTG +
Preference number: 2 (lower is better)
Translates to: GTGLAVLVGFVPSASTSPHMLKL*SQMMVL
Trigger: CAATACCATCATTTGGGATCAGAGTTTCAACATATG...TGGGGAAGTGGAGGCCGAGGGAACAAAGCCAACTAAGACTGCCAGCCCGGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR GCA 90 bp ATCTTCACTAAACTCCCCTCATCCAAGCCTCTGTCACCTCTGGCCTGGACAACTTCCCTCAGCCTGGACTaGTTTTCTCCAGATCCTTCT +
Preference number: 2 (lower is better)
Translates to: IFTKLPSSKPLSPLAWTTSLSLD*FSPDPS
Trigger: AGAAGGATCTGGAGAAAAGCAGTCCAGGCTGAGGGA...AGTTGTCCAGGCCAGAGGTGACAGAGGCTTGGATGAGGGGAGTTTAGTGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR GCA 90 bp CATCTTGAGGTCTTTCCTGGCGGCTTCCCTGCTGCTAGCTACCCCTCTCATACCATTTCCTGGTGTTTCTaGTTAAACAGCGTTTGCTGC +
Preference number: 2 (lower is better)
Translates to: HLEVFPGGFPAASYPSHTISWCF*LNSVCC
Trigger: GCAGCAAACGCTGTTTAAGCAGAAACACCAGGAAAT...GGTATGAGAGGGGTAGCTAGCAGCAGGGAAGCCGCCAGGAAAGACCTCAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp TCACTTTCATTAGGAACCGGGACGAATAATCCAACTGAGCTGCCTCTGCACCAGAGCCTCTGTCACCTCTaGCCTGGACAACTAACAGCA +
Preference number: 2 (lower is better)
Translates to: SLSLGTGTNNPTELPLHQSLCHL*PGQLTA
Trigger: TGCTGTTAGTTGTCCAGGCCAGAGGTGACAGAGGCT...CTGGTGCAGAGGCAGCTCAGTTGGATTATTCGTCCCGGTTCCTAATGAAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp GGCCTGGAGATGAGGCTCGGTCAGATCATCTTGAGGTCTTTCCTGGCGGCTTCCTCAAAGTCAAATGCTTaGCTTGGAGACAGGGATTTA +
Preference number: 2 (lower is better)
Translates to: GLEMRLGQIILRSFLAASSKSNA*LGDRDL
Trigger: TAAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGA...GGAAGCCGCCAGGAAAGACCTCAAGATGATCTGACCGAGCCTCATCTCCAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR TCA 90 bp CATCTTGAGGTCTTTCCTGGCGGCTTCCCTGCTGCTAGCTACCCCTCTCATACCGCTCAGTACAGATTTTaGATGGATTCCATAGGTTCT +
Preference number: 2 (lower is better)
Translates to: HLEVFPGGFPAASYPSHTAQYRF*MDSIGS
Trigger: AGAACCTATGGAATCCATTCAAAATCTGTACTGAGC...GGTATGAGAGGGGTAGCTAGCAGCAGGGAAGCCGCCAGGAAAGACCTCAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR GCA 90 bp AGAAATCTCACTGTGAACCCATTAGGAGAGCCCTCTGCCGCCAGCTATGCTGTCAAGTACGGGCTTCTTTaGTTGCGATTTCTCCTCTCA +
Preference number: 2 (lower is better)
Translates to: RNLTVNPLGEPSAASYAVKYGLL*LRFLLS
Trigger: TGAGAGGAGAAATCGCAAGCAAAGAAGCCCGTACTT...GACAGCATAGCTGGCGGCAGAGGGCTCTCCTAATGGGTTCACAGTGAGATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR GCA 90 bp CCTCTCTTCCTTGTGACTATGACCAAGTCTTACTCCTTCCTGGACCTTCATTTCAGCCCCCTGAGCGCTTaGAAACACTGCAGACAAAGC +
Preference number: 2 (lower is better)
Translates to: PLFLVTMTKSYSFLDLHFSPLSA*KHCRQS
Trigger: GCTTTGTCTGCAGTGTTTGCAAGCGCTCAGGGGGCT...GAAATGAAGGTCCAGGAAGGAGTAAGACTTGGTCATAGTCACAAGGAAGAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR GCA 90 bp GTTTTCTCCTGTCTGAAGACGCAGCTGGCACCAATGTACCCTATGGCCAAGGACTGCTTCAAAGTCAAATaGTTGGCTTGGAGACAGGGA +
Preference number: 2 (lower is better)
Translates to: VFSCLKTQLAPMYPMAKDCFKVK*LAWRQG
Trigger: TCCCTGTCTCCAAGCCAAGCATTTGACTTTGAAGCA...GTCCTTGGCCATAGGGTACATTGGTGCCAGCTGCGTCTTCAGACAGGAGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp CATTCTGTGCCTCCATTTATTTGTGAGACAGGGATAAAGAGGTCTGCCACTTTTGACCCTCACCAGACCTaGCAGCTGCCTGACAGCTTG +
Preference number: 2 (lower is better)
Translates to: HSVPPFICETGIKRSATFDPHQT*QLPDSL
Trigger: CAAGCTGTCAGGCAGCTGCCAGGTCTGGTGAGGGTC...AAAAGTGGCAGACCTCTTTATCCCTGTCTCACAAATAAATGGAGGCACAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp CATTCTGTGCCTCCATTTATTTGTGAGACAGGGATAAAGAGGTCTGCCACTTTTTGCAGCCCTTTCTCCTaGGAAGGAGGGAGCTCCCGA +
Preference number: 2 (lower is better)
Translates to: HSVPPFICETGIKRSATFCSPFS*EGGSSR
Trigger: TCGGGAGCTCCCTCCTTCCCAGGAGAAAGGGCTGCA...AAAAGTGGCAGACCTCTTTATCCCTGTCTCACAAATAAATGGAGGCACAGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp TCTCCTCAAACTTCATATGTTGAAACTCTGATCCCAAATGATGGTATTGCGGGGGGTGTGTATCCGGCCTaGGAATTCCTCCCTCTCCCT +
Preference number: 2 (lower is better)
Translates to: SPQTSYVETLIPNDGIAGGVYPA*EFLPLP
Trigger: AGGGAGAGGGAGGAATTCCCAGGCCGGATACACACC...CCCCGCAATACCATCATTTGGGATCAGAGTTTCAACATATGAAGTTTGAGGAGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR GCA 90 bp AAGTTACACTGCTTCAAAGTCAAATGCTTGGCTTGGAGACAGGGATTTATCTTGGTCCAGGGCATGGGTTaGGGATCGTGTAGGGAAGAG +
Preference number: 2 (lower is better)
Translates to: KLHCFKVKCLAWRQGFILVQGMG*GSCREE
Trigger: CTCTTCCCTACACGATCCGCAACCCATGCCCTGGAC...CAAGATAAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGAAGCAGTGTAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR GCA 90 bp CCTCTCTTCCTTGTGACTATGACCAAGTCTTACTCCTTCCTGGACCTTCATTTCACGGGCTTCTTTGCTTaGGATTTCTCCTCTCACAGC +
Preference number: 2 (lower is better)
Translates to: PLFLVTMTKSYSFLDLHFTGFFA*DFSSHS
Trigger: GCTGTGAGAGGAGAAATCGCAAGCAAAGAAGCCCGT...GAAATGAAGGTCCAGGAAGGAGTAAGACTTGGTCATAGTCACAAGGAAGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR GCA 90 bp TCTCCTCAAACTTCATATGTTGAAACTCTGATCCCAAATGATGGTATTGCGGGGACACAGTGGGCTGGATaGTGGATGCAAAGCTCCCTC +
Preference number: 2 (lower is better)
Translates to: SPQTSYVETLIPNDGIAGTQWAG*WMQSSL
Trigger: GAGGGAGCTTTGCATCCAGCATCCAGCCCACTGTGT...CCCCGCAATACCATCATTTGGGATCAGAGTTTCAACATATGAAGTTTGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp AAGTTACACTGCTTCAAAGTCAAATGCTTGGCTTGGAGACAGGGATTTATCTTGCAGCATCTGAGGTGGTaGCCCTGCTTCCCCTCTTAC +
Preference number: 2 (lower is better)
Translates to: KLHCFKVKCLAWRQGFILQHLRW*PCFPSY
Trigger: GTAAGAGGGGAAGCAGGGCCACCACCTCAGATGCTG...CAAGATAAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGAAGCAGTGTAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp GTTTTCTCCTGTCTGAAGACGCAGCTGGCACCAATGTACCCTATGGCCAAGGACAAGCCTAGGAAATCCTaGAATAAGATAGACCAATGC +
Preference number: 2 (lower is better)
Translates to: VFSCLKTQLAPMYPMAKDKPRKS*NKIDQC
Trigger: GCATTGGTCTATCTTATTCCAGGATTTCCTAGGCTT...GTCCTTGGCCATAGGGTACATTGGTGCCAGCTGCGTCTTCAGACAGGAGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CAA 90 bp AATAAGACGTTCCTCACCAAGTTACACTGCTTCAAAGTCAAATGCTaGGCTTGGAGACAGGGATTTATCTTGGGATCGCAGGCCCTTAGC +
Preference number: 2 (lower is better)
Translates to: NKTFLTKLHCFKVKC*AWRQGFILGSQALS
Trigger: GCTAAGGGCCTGCGATCCCAAGATAAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGAAGCAGTGTAACTTGGTGAGGAACGTCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR GCA 90 bp AAGTTACACTGCTTCAAAGTCAAATGCTTGGCTTGGAGACAGGGATTTATCTTGGTCTTCCTCACCAAGTaGCAAAGGGCCAAGGCTTGG +
Preference number: 2 (lower is better)
Translates to: KLHCFKVKCLAWRQGFILVFLTK*QRAKAW
Trigger: CCAAGCCTTGGCCCTTTGGCACTTGGTGAGGAAGAC...CAAGATAAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGAAGCAGTGTAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR GCA 90 bp TCACTTTCATTAGGAACCGGGACGAATAATCCAACTGAGCTGCCTCTGCACCAGCATGTCCTTCTTGCCTaGCTTCATAGTTCCGAAAAA +
Preference number: 2 (lower is better)
Translates to: SLSLGTGTNNPTELPLHQHVLLA*LHSSEK
Trigger: TTTTTCGGAACTATGAAGGCAGGCAAGAAGGACATG...CTGGTGCAGAGGCAGCTCAGTTGGATTATTCGTCCCGGTTCCTAATGAAAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp TATGCAAAGGGCCTAGACACAGGAGTGCGATACAATCAATGCTCAGTACAGATTCAAAGGGCCAAGGCTTaGTCTGTCTTGTTCACTGTG +
Preference number: 2 (lower is better)
Translates to: YAKGLDTGVRYNQCSVQIQRAKA*SVLFTV
Trigger: CACAGTGAACAAGACAGACCAAGCCTTGGCCCTTTG...AATCTGTACTGAGCATTGATTGTATCGCACTCCTGTGTCTAGGCCCTTTGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR TCA 90 bp ATCTTCACTAAACTCCCCTCATCCAAGCCTCTGTCACCTCTGGCCTGGACAACTGTTACTGAGCTCAACTaGAGCTTTTTCTTCAAAGAA +
Preference number: 2 (lower is better)
Translates to: IFTKLPSSKPLSPLAWTTVTELN*SFFFKE
Trigger: TTCTTTGAAGAAAAAGCTTCAGTTGAGCTCAGTAAC...AGTTGTCCAGGCCAGAGGTGACAGAGGCTTGGATGAGGGGAGTTTAGTGAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR TCA 90 bp ACCAAGTGCCAAAGGGCCAAGGCTTGGTCTGTCTTGTTCACTGTGTTCAATCACTCGCTAAGATGTTACTaGGCTCAACTGAAGCTTTTT +
Preference number: 2 (lower is better)
Translates to: TKCQRAKAWSVLFTVFNHSLRCY*AQLKLF
Trigger: AAAAAGCTTCAGTTGAGCTCAGTAACATCTTAGCGA...GTGATTGAACACAGTGAACAAGACAGACCAAGCCTTGGCCCTTTGGCACTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp CTTATAAGAACAGTAAGAGATAAATGTTTAAGTCCCCCAGCCTATGGTGTTCTGGCAGAACTGATGAGCTaGGGCACCCTGAAACCTGAC +
Preference number: 2 (lower is better)
Translates to: LIRTVRDKCLSPPAYGVLAELMS*GTLKPD
Trigger: GTCAGGTTTCAGGGTGCCCCAGCTCATCAGTTCTGC...CAGAACACCATAGGCTGGGGGACTTAAACATTTATCTCTTACTGTTCTTATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp GCGTTTGCTGCAAAATATGTCGAAGCATTTGGGATTCAGTTTTTAGTTCAGAATGGCACACACTCCCCCTaGCACTTGGTTCTCGCTAAG +
Preference number: 2 (lower is better)
Translates to: AFAAKYVEAFGIQFLVQNGTHSP*HLVLAK
Trigger: CTTAGCGAGAACCAAGTGCCAGGGGGAGTGTGTGCC...ATTCTGAACTAAAAACTGAATCCCAAATGCTTCGACATATTTTGCAGCAAACGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR TCA 90 bp TGGCTCTTAACCATGACCCTAATACTGCCTCCTCAAGTAGGTGCTCAGCAAATGTCAAAGTCTGTTGAATaGGTGAGTGCATATGCAAAG +
Preference number: 2 (lower is better)
Translates to: WLLTMTLILPPQVGAQQMSKSVE*VSAYAK
Trigger: CTTTGCATATGCACTCACTCATTCAACAGACTTTGA...CATTTGCTGAGCACCTACTTGAGGAGGCAGTATTAGGGTCATGGTTAAGAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR GCA 90 bp AAGTTACACTGCTTCAAAGTCAAATGCTTGGCTTGGAGACAGGGATTTATCTTGTACAAAGGTGATTCGTaGCTGGCTCCCTGTGTCTTC +
Preference number: 2 (lower is better)
Translates to: KLHCFKVKCLAWRQGFILYKGDS*LAPCVF
Trigger: GAAGACACAGGGAGCCAGGCACGAATCACCTTTGTA...CAAGATAAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGAAGCAGTGTAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp CTTATAAGAACAGTAAGAGATAAATGTTTAAGTCCCCCAGCCTATGGTGTTCTGGAGTCTGGCCATTCCTaGCATCCAGTTAGACCTGGA +
Preference number: 2 (lower is better)
Translates to: LIRTVRDKCLSPPAYGVLESGHS*HPVRPG
Trigger: TCCAGGTCTAACTGGATGCCAGGAATGGCCAGACTC...CAGAACACCATAGGCTGGGGGACTTAAACATTTATCTCTTACTGTTCTTATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp CTAGACACAGGAGTGCGATACAATCAATGCTCAGTACAGATTTTGAATGGATTCCTGATTCCCTCAGCCTaGACTGCTTTTCTCCAGATC +
Preference number: 2 (lower is better)
Translates to: LDTGVRYNQCSVQILNGFLIPSA*TAFLQI
Trigger: GATCTGGAGAAAAGCAGTCCAGGCTGAGGGAATCAG...GAATCCATTCAAAATCTGTACTGAGCATTGATTGTATCGCACTCCTGTGTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR TCA 90 bp CTTATAAGAACAGTAAGAGATAAATGTTTAAGTCCCCCAGCCTATGGTGTTCTGTCAGCCTGCTTGCGGTaGATGGCATTAGTGTCCATT +
Preference number: 2 (lower is better)
Translates to: LIRTVRDKCLSPPAYGVLSACLR*MALVSI
Trigger: AATGGACACTAATGCCATTCACCGCAAGCAGGCTGA...CAGAACACCATAGGCTGGGGGACTTAAACATTTATCTCTTACTGTTCTTATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR TCA 90 bp AAGTTACACTGCTTCAAAGTCAAATGCTTGGCTTGGAGACAGGGATTTATCTTGAGTCTGTTGAATGAGTaGGTGCATATGCAAAGGGCC +
Preference number: 2 (lower is better)
Translates to: KLHCFKVKCLAWRQGFILSLLNE*VHMQRA
Trigger: GGCCCTTTGCATATGCACTCACTCATTCAACAGACT...CAAGATAAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGAAGCAGTGTAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp CTTATAAGAACAGTAAGAGATAAATGTTTAAGTCCCCCAGCCTATGGTGTTCTGCAGCTCTGCCTCAAATaGATTTGGGAGCGAAGGCTT +
Preference number: 2 (lower is better)
Translates to: LIRTVRDKCLSPPAYGVLQLCLK*IWERRL
Trigger: AAGCCTTCGCTCCCAAATCCATTTGAGGCAGAGCTG...CAGAACACCATAGGCTGGGGGACTTAAACATTTATCTCTTACTGTTCTTATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp CTAGACACAGGAGTGCGATACAATCAATGCTCAGTACAGATTTTGAATGGATTCTGCCTCAAATGGATTTaGGAGCGAAGGCTTTTTCCA +
Preference number: 2 (lower is better)
Translates to: LDTGVRYNQCSVQILNGFCLKWI*ERRLFP
Trigger: TGGAAAAAGCCTTCGCTCCCAAATCCATTTGAGGCA...GAATCCATTCAAAATCTGTACTGAGCATTGATTGTATCGCACTCCTGTGTCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CCA 90 bp TATGCAAAGGGCCTAGACACAGGAGTGCGATACAATCAATGCTCAGTACAGATTGTCATTTTTGCAAAATaGGAATGGGATTGTGTCATC +
Preference number: 2 (lower is better)
Translates to: YAKGLDTGVRYNQCSVQIVIFAK*EWDCVI
Trigger: GATGACACAATCCCATTCCCATTTTGCAAAAATGAC...AATCTGTACTGAGCATTGATTGTATCGCACTCCTGTGTCTAGGCCCTTTGCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CAA 90 bp CTGCTCACAGGATATAAATATTCATGCATGAGTATAGGTGCAGGTTaGTACATTTGCAAGGGCATGGGTATAACACGCTTTCCATTGTAT +
Preference number: 2 (lower is better)
Translates to: LLTGYKYSCMSIGAG*YICKGMGITRFPLY
Trigger: ATACAATGGAAAGCGTGTTATACCCATGCCCTTGCAAATGTACAAACCTGCACCTATACTCATGCATGAATATTTATATCCTGTGAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 72 bp GGGAGCCCTCACTGGAGGCACCCCTCAAACCCTCAGTaGTGTGGCCAGGGAACCGGGCTGGCAGTCTTAGTT +
Preference number: 3 (lower is better)
Translates to: GSPHWRHPSNPQ*CGQGTGLAVLV
Trigger: AACTAAGACTGCCAGCCCGGTTCCCTGGCCACAGCACTGAGGGTTTGAGGGGTGCCTCCAGTGAGGGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CAA 90 bp CTAGGAAAACCACAGAGCCGGCTATCCAGGGTTCTGGTGCCCTGGGGACCACAGATTCCTCCCTCTCCCTaGCTAGCGCCCCAACCCGCC +
Preference number: 3 (lower is better)
Translates to: LGKPQSRLSRVLVPWGPQIPPSP*LAPQPA
Trigger: GGCGGGTTGGGGCGCTAGCAAGGGAGAGGGAGGAAT...CTGTGGTCCCCAGGGCACCAGAACCCTGGATAGCCGGCTCTGTGGTTTTCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 72 bp CCAGGTCCTCCATGGTATGGCTCCCACCCACCTCACTaGCCTTTCCTGGGGCTGTTCTCCAGCCACATGGGC +
Preference number: 3 (lower is better)
Translates to: PGPPWYGSHPPH*PFLGLFSSHMG
Trigger: GCCCATGTGGCTGGAGAACAGCCCCAGGAAAGGTCAGTGAGGTGGGTGGGAGCCATACCATGGAGGACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 72 bp GCCTTCTCCCGAGGACCTAAGAGCCCCCTGAGCGCTTaGAAACACTGCAGACAAAGCGAGCCCTGGCACCAG +
Preference number: 3 (lower is better)
Translates to: AFSRGPKSPLSA*KHCRQSEPWHQ
Trigger: CTGGTGCCAGGGCTCGCTTTGTCTGCAGTGTTTGCAAGCGCTCAGGGGGCTCTTAGGTCCTCGGGAGAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 72 bp CCTGTGGTGCCTTCTCCCGAGGACCTAAGAGCCCCCTaGGCGCTTGCAAACACTGCAGACAAAGCGAGCCCT +
Preference number: 3 (lower is better)
Translates to: PVVPSPEDLRAP*ALANTADKASP
Trigger: AGGGCTCGCTTTGTCTGCAGTGTTTGCAAGCGCTCAGGGGGCTCTTAGGTCCTCGGGAGAAGGCACCACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 72 bp AAGGAGACAGACGGCAAAGGAGAAGCTGCCTGTCTCTaGACAGGTCCATGTCCAGGCCTCGGAGGCAGGGGA +
Preference number: 3 (lower is better)
Translates to: KETDGKGEAACL*TGPCPGLGGRG
Trigger: TCCCCTGCCTCCGAGGCCTGGACATGGACCTGTGCAGAGACAGGCAGCTTCTCCTTTGCCGTCTGTCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469379.5
3UTR CCA 72 bp CTGAGCGCTTGCAAACACTGCAGACAAAGCGAGCCCTaGCACCAGCTCCCTGCCTGCCTGTTCTGTGAAGGG +
Preference number: 3 (lower is better)
Translates to: LSACKHCRQSEP*HQLPACLFCEG
Trigger: CCCTTCACAGAACAGGCAGGCAGGGAGCTGGTGCCAGGGCTCGCTTTGTCTGCAGTGTTTGCAAGCGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 72 bp GTGCTGTGGCCAGGGAACCGGGCTGGCAGTCTTAGTTaGCTTTGTTCCCTCGGCCTCCACTTCCCCATTCTG +
Preference number: 3 (lower is better)
Translates to: VLWPGNRAGSLS*LCSLGLHFPIL
Trigger: CAGAATGGGGAAGTGGAGGCCGAGGGAACAAAGCCAACTAAGACTGCCAGCCCGGTTCCCTGGCCACAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 72 bp GGCAGAAACTATGAGCTGGTGTTCCAAGGTCGGGGATaGGGAGCCCTCACTGGAGGCACCCCTCAAACCCTC +
Preference number: 3 (lower is better)
Translates to: GRNYELVFQGRG*GALTGGTPQTL
Trigger: GAGGGTTTGAGGGGTGCCTCCAGTGAGGGCTCCCCATCCCCGACCTTGGAACACCAGCTCATAGTTTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CAA 90 bp CTAGGAAAACCACAGAGCCGGCTATCCAGGGTTCTGGTGCCCTGGGGACCACAGGGCTTTCCACTGCTCTaGGCTATGGCCTTCCAGGTC +
Preference number: 3 (lower is better)
Translates to: LGKPQSRLSRVLVPWGPQGFPLL*AMAFQV
Trigger: GACCTGGAAGGCCATAGCCAAGAGCAGTGGAAAGCC...CTGTGGTCCCCAGGGCACCAGAACCCTGGATAGCCGGCTCTGTGGTTTTCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 72 bp CCTCTGTCACCTCTGGCCTGGACAACTAACAGCATCTaGGGTGGTGGCCCTGCTTCCCCTCTTACCCCTCAG +
Preference number: 3 (lower is better)
Translates to: PLSPLAWTTNSI*GGGPASPLTPQ
Trigger: CTGAGGGGTAAGAGGGGAAGCAGGGCCACCACCTCAGATGCTGTTAGTTGTCCAGGCCAGAGGTGACAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 72 bp GGCACCAATGTACCCTATGGCCAAGGACCTTCTGGGTaGGCCTCATGTCAGGAGCAGAGCTGGAGAGGTGGC +
Preference number: 3 (lower is better)
Translates to: GTNVPYGQGPSG*ASCQEQSWRGG
Trigger: GCCACCTCTCCAGCTCTGCTCCTGACATGAGGCTCACCCAGAAGGTCCTTGGCCATAGGGTACATTGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CAA 90 bp GGAACCGGGCTGGCAGTCTTAGTTGGCTTTGTTCCCTCGGCCTCCACTTCCCCATCTCACCTGAAGGTCTaGGCACCACTGATTCCCTCA +
Preference number: 3 (lower is better)
Translates to: GTGLAVLVGFVPSASTSPSHLKV*APLIPS
Trigger: TGAGGGAATCAGTGGTGCCAAGACCTTCAGGTGAGA...TGGGGAAGTGGAGGCCGAGGGAACAAAGCCAACTAAGACTGCCAGCCCGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 72 bp GGGAGCAGGTGCAGCCATTCTGATCCTCCACGCTGGTaGCAGGCTATGTGGCAGGAGGGTCTCTACCTTATC +
Preference number: 3 (lower is better)
Translates to: GSRCSHSDPPRW*QAMWQEGLYLI
Trigger: GATAAGGTAGAGACCCTCCTGCCACATAGCCTGTCACCAGCGTGGAGGATCAGAATGGCTGCACCTGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469379.5
3UTR GCA 72 bp ACGAATAATCCAACTGAGCTGCCTCTGCACCAGAACTaGTGGGACGTGAAGACTCTCCCTGGCTCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: TNNPTELPLHQN*WDVKTLPGSQA
Trigger: GGCCTGGGAGCCAGGGAGAGTCTTCACGTCCCAGCAGTTCTGGTGCAGAGGCAGCTCAGTTGGATTATTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 72 bp AATAATCCAACTGAGCTGCCTCTGCACCAGAACTGCTaGGACGTGAAGACTCTCCCTGGCTCCCAGGCCAGC +
Preference number: 3 (lower is better)
Translates to: NNPTELPLHQNC*DVKTLPGSQAS
Trigger: GCTGGCCTGGGAGCCAGGGAGAGTCTTCACGTCCCAGCAGTTCTGGTGCAGAGGCAGCTCAGTTGGATTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 72 bp GGCACAGGGGTTCTGCTGATAGCACAGGCCACAGATTaGCAAGGAGGGACCAGGTTAGGAAGGAGCAGCTGT +
Preference number: 3 (lower is better)
Translates to: GTGVLLIAQATD*QGGTRLGRSSC
Trigger: ACAGCTGCTCCTTCCTAACCTGGTCCCTCCTTGCCAATCTGTGGCCTGTGCTATCAGCAGAACCCCTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 72 bp AGCTGGCACCAATGTACCCTATGGCCAAGGACCTTCTaGGTGAGCCTCATGTCAGGAGCAGAGCTGGAGAGG +
Preference number: 3 (lower is better)
Translates to: SWHQCTLWPRTF*VSLMSGAELER
Trigger: CCTCTCCAGCTCTGCTCCTGACATGAGGCTCACCCAGAAGGTCCTTGGCCATAGGGTACATTGGTGCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 72 bp CAGCCCCAAAGACAGGACTTGACCATCTCAGTGCAATaGCCCTGTGGTGCCTTCTCCCGAGGACCTAAGAGC +
Preference number: 3 (lower is better)
Translates to: QPQRQDLTISVQ*PCGAFSRGPKS
Trigger: GCTCTTAGGTCCTCGGGAGAAGGCACCACAGGGTCATTGCACTGAGATGGTCAAGTCCTGTCTTTGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 72 bp CCTACCTCTCACATACACAGTGGGCTGGATGCTGGATaGAAAGCTCCCTCGTCACAGCCCCAAAGACAGGAC +
Preference number: 3 (lower is better)
Translates to: PTSHIHSGLDAG*KAPSSQPQRQD
Trigger: GTCCTGTCTTTGGGGCTGTGACGAGGGAGCTTTGCATCCAGCATCCAGCCCACTGTGTATGTGAGAGGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CAA 90 bp GTTTTCTCCTGTCTGAAGACGCAGCTGGCACCAATGTACCCTATGGCCAAGGACCAGCTGCCTGACAGCTaGTCTGGCTCACGTGTTCTC +
Preference number: 3 (lower is better)
Translates to: VFSCLKTQLAPMYPMAKDQLPDS*SGSRVL
Trigger: GAGAACACGTGAGCCAGACAAGCTGTCAGGCAGCTG...GTCCTTGGCCATAGGGTACATTGGTGCCAGCTGCGTCTTCAGACAGGAGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 72 bp GCAAAGCTCCCTCGTCACAGCCCCAAAGACAGGACTTaGCCATCTCAGTGCAATGACCCTGTGGTGCCTTCT +
Preference number: 3 (lower is better)
Translates to: AKLPRHSPKDRT*PSQCNDPVVPS
Trigger: AGAAGGCACCACAGGGTCATTGCACTGAGATGGTCAAGTCCTGTCTTTGGGGCTGTGACGAGGGAGCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 72 bp TGTGACCACATGAGAATGGCTGAGAAAGAGCAGGACTaGCTACCGGCGTTCCCCTGCTTATGGAAAGGGGCC +
Preference number: 3 (lower is better)
Translates to: CDHMRMAEKEQD*LPAFPCLWKGA
Trigger: GGCCCCTTTCCATAAGCAGGGGAACGCCGGTAGTCAGTCCTGCTCTTTCTCAGCCATTCTCATGTGGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 72 bp GCCCTTGCCCACCATATCTCAGCATCCCCTCTTCATTaGCACTTAGACCCTGTGCCCAGTGACACTCCAGTA +
Preference number: 3 (lower is better)
Translates to: ALAHHISASPLH*HLDPVPSDTPV
Trigger: TACTGGAGTGTCACTGGGCACAGGGTCTAAGTGGCAATGAAGAGGGGATGCTGAGATATGGTGGGCAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 72 bp GACAAGCTGACTCTGGTGGCAACGTTCTCCAGTCTCTaGATTTTCAGCTCGCTGTGTGCCAAGAGAGGGCTG +
Preference number: 3 (lower is better)
Translates to: DKLTLVATFSSL*IFSSLCAKRGL
Trigger: CAGCCCTCTCTTGGCACACAGCGAGCTGAAAATGCAGAGACTGGAGAACGTTGCCACCAGAGTCAGCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 72 bp ACCTTCATTTCCCTACCTCTCACATACACAGTGGGCTaGATGCTGGATGCAAAGCTCCCTCGTCACAGCCCC +
Preference number: 3 (lower is better)
Translates to: TFISLPLTYTVG*MLDAKLPRHSP
Trigger: GGGGCTGTGACGAGGGAGCTTTGCATCCAGCATCCAGCCCACTGTGTATGTGAGAGGTAGGGAAATGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 72 bp AGGTCACAGCTACCCTGGGATGTGAACCCAGGGCCCTaGCTCTTAACCATGACCCTAATACTGCCTCCTCAA +
Preference number: 3 (lower is better)
Translates to: RSQLPWDVNPGP*LLTMTLILPPQ
Trigger: TTGAGGAGGCAGTATTAGGGTCATGGTTAAGAGCCAGGGCCCTGGGTTCACATCCCAGGGTAGCTGTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 72 bp AGTGCGTATGAAATAGGCCTGGCAGAAACTATGAGCTaGTGTTCCAAGGTCGGGGATGGGGAGCCCTCACTG +
Preference number: 3 (lower is better)
Translates to: SAYEIGLAETMS*CSKVGDGEPSL
Trigger: CAGTGAGGGCTCCCCATCCCCGACCTTGGAACACCAGCTCATAGTTTCTGCCAGGCCTATTTCATACGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 72 bp CCCTCAGCTCCAAATCTGAGCTGCACCAGGACAAGCTaGCTCTGGTGGCAACGTTCTCCAGTCTCTGCATTT +
Preference number: 3 (lower is better)
Translates to: PSAPNLSCTRTS*LWWQRSPVSAF
Trigger: AAATGCAGAGACTGGAGAACGTTGCCACCAGAGTCAGCTTGTCCTGGTGCAGCTCAGATTTGGAGCTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 72 bp CCTCCCTGTGTCACCATTGTCTGTCTCTTGCTTAGATaGCAGCCACAGCTTCCTGGCCTGGTTTCCTGCATC +
Preference number: 3 (lower is better)
Translates to: PPCVTIVCLLLR*QPQLPGLVSCI
Trigger: GATGCAGGAAACCAGGCCAGGAAGCTGTGGCTGTCATCTAAGCAAGAGACAGACAATGGTGACACAGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 72 bp TCATTTCCCTACCTCTCACATACACAGTGGGCTGGATaGTGGATGCAAAGCTCCCTCGTCACAGCCCCAAAG +
Preference number: 3 (lower is better)
Translates to: SFPYLSHTQWAG*WMQSSLVTAPK
Trigger: CTTTGGGGCTGTGACGAGGGAGCTTTGCATCCAGCATCCAGCCCACTGTGTATGTGAGAGGTAGGGAAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 72 bp AACGTTCTCCAGTCTCTGCATTTTCAGCTCGCTGTGTaGCAAGAGAGGGCTGGCAGGTACCAGCAGCTTTCA +
Preference number: 3 (lower is better)
Translates to: NVLQSLHFQLAV*QERAGRYQQLS
Trigger: TGAAAGCTGCTGGTACCTGCCAGCCCTCTCTTGGCACACAGCGAGCTGAAAATGCAGAGACTGGAGAACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 72 bp TTTCCCTACCTCTCACATACACAGTGGGCTGGATGCTaGATGCAAAGCTCCCTCGTCACAGCCCCAAAGACA +
Preference number: 3 (lower is better)
Translates to: FPYLSHTQWAGC*MQSSLVTAPKT
Trigger: TGTCTTTGGGGCTGTGACGAGGGAGCTTTGCATCCAGCATCCAGCCCACTGTGTATGTGAGAGGTAGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CAA 90 bp CAATGGCTTTCCACTGCTCTTGGCTATGGCCTTCCAGGTCCTCCATGGTATGGCCTGCCTCAAATGGATTaGGGAGCGAAGGCTTTTTCC +
Preference number: 3 (lower is better)
Translates to: QWLSTALGYGLPGPPWYGLPQMD*GAKAFS
Trigger: GGAAAAAGCCTTCGCTCCCAAATCCATTTGAGGCAG...GCCATACCATGGAGGACCTGGAAGGCCATAGCCAAGAGCAGTGGAAAGCCATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 72 bp AAGTCAAATGCTTGGCTTGGAGACAGGGATTTATCTTaGGATCGCAGGCCCTTAGCACACGGCCTGGCAGAA +
Preference number: 3 (lower is better)
Translates to: KSNAWLGDRDLS*DRRPLAHGLAE
Trigger: TTCTGCCAGGCCGTGTGCTAAGGGCCTGCGATCCCAAGATAAATCCCTGTCTCCAAGCCAAGCATTTGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 72 bp GACATGCTCCACGCCCTTAGTCACTGTTTCCTGGATTaGCGTGTGGGGAACACATGTGACCACATGAGAATG +
Preference number: 3 (lower is better)
Translates to: DMLHALSHCFLD*RVGNTCDHMRM
Trigger: CATTCTCATGTGGTCACATGTGTTCCCCACACGCCAATCCAGGAAACAGTGACTAAGGGCGTGGAGCATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CAA 90 bp ACCAAGTGCCAAAGGGCCAAGGCTTGGTCTGTCTTGTTCACTGTGTTCAATCACAGCATCCCCTCTTCATaGCCACTTAGACCCTGTGCC +
Preference number: 3 (lower is better)
Translates to: TKCQRAKAWSVLFTVFNHSIPSS*PLRPCA
Trigger: GGCACAGGGTCTAAGTGGCAATGAAGAGGGGATGCT...GTGATTGAACACAGTGAACAAGACAGACCAAGCCTTGGCCCTTTGGCACTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CAA 90 bp TCACTTTCATTAGGAACCGGGACGAATAATCCAACTGAGCTGCCTCTGCACCAGCTGCCTGTGGTTGTCTaGGCAAAGCCAGGTAATGCA +
Preference number: 3 (lower is better)
Translates to: SLSLGTGTNNPTELPLHQLPVVV*AKPGNA
Trigger: TGCATTACCTGGCTTTGCCAAGACAACCACAGGCAG...CTGGTGCAGAGGCAGCTCAGTTGGATTATTCGTCCCGGTTCCTAATGAAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 72 bp AAGTCCCCCAGCCTATGGTGTTCTGTTATAGCAGACTaGACTAAGACACCCTCTGCCTGTGGTTGTCTTGGC +
Preference number: 3 (lower is better)
Translates to: KSPSLWCSVIAD*TKTPSACGCLG
Trigger: GCCAAGACAACCACAGGCAGAGGGTGTCTTAGTTCAGTCTGCTATAACAGAACACCATAGGCTGGGGGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 72 bp ATAGACCAATGCATCGATAACCCTCAGCTCCAAATCTaGGCTGCACCAGGACAAGCTGACTCTGGTGGCAAC +
Preference number: 3 (lower is better)
Translates to: IDQCIDNPQLQI*AAPGQADSGGN
Trigger: GTTGCCACCAGAGTCAGCTTGTCCTGGTGCAGCTCAGATTTGGAGCTGAGGGTTATCGATGCATTGGTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 72 bp CTAGTCTTCCTCACCAAGTGCCAAAGGGCCAAGGCTTaGTCTGTCTTGTTCACTGTGTTCAATCACCAGGCA +
Preference number: 3 (lower is better)
Translates to: LVFLTKCQRAKA*SVLFTVFNHQA
Trigger: TGCCTGGTGATTGAACACAGTGAACAAGACAGACCAAGCCTTGGCCCTTTGGCACTTGGTGAGGAAGACTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 72 bp CATAACTCAAATCTGACTGTGTCCCTGTGGAAGGTTTaGGTTTCTGACCTGGGCAGCTCTATGTCCGGCACA +
Preference number: 3 (lower is better)
Translates to: HNSNLTVSLWKV*VSDLGSSMSGT
Trigger: TGTGCCGGACATAGAGCTGCCCAGGTCAGAAACCCAAACCTTCCACAGGGACACAGTCAGATTTGAGTTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 72 bp GACCGTCTACTAGAGGCCAGGCACAGTTTTAAGTGTTaGGGACATGGCAGTGAACACAACAGGGAAGCTCAT +
Preference number: 3 (lower is better)
Translates to: DRLLEARHSFKC*GHGSEHNREAH
Trigger: ATGAGCTTCCCTGTTGTGTTCACTGCCATGTCCTCAACACTTAAAACTGTGCCTGGCCTCTAGTAGACGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 72 bp AGCAAACCCAAGGCCAAAAGGAAGTACGGGCTTCTTTaGTTGCGATTTCTCCTCTCACAGCTTTGGCCTAGA +
Preference number: 3 (lower is better)
Translates to: SKPKAKRKYGLL*LRFLLSQLWPR
Trigger: TCTAGGCCAAAGCTGTGAGAGGAGAAATCGCAAGCAAAGAAGCCCGTACTTCCTTTTGGCCTTGGGTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 72 bp CTGTCAGTAGGTCCTACCCCACCCTGTACCACCATCTaGAACAGACTCAATGTTTGTGTCTCCTCAAACTTC +
Preference number: 3 (lower is better)
Translates to: LSVGPTPPCTTI*NRLNVCVSSNF
Trigger: GAAGTTTGAGGAGACACAAACATTGAGTCTGTTGCAGATGGTGGTACAGGGTGGGGTAGGACCTACTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 72 bp CTCTTGTTTGGGTTCCTACTAGTCTTCCTCACCAAGTaGCAAAGGGCCAAGGCTTGGTCTGTCTTGTTCACT +
Preference number: 3 (lower is better)
Translates to: LLFGFLLVFLTK*QRAKAWSVLFT
Trigger: AGTGAACAAGACAGACCAAGCCTTGGCCCTTTGGCACTTGGTGAGGAAGACTAGTAGGAACCCAAACAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 72 bp TATACTTGCCTCCCTGTGTCACCATTGTCTGTCTCTTaGTTAGATGACAGCCACAGCTTCCTGGCCTGGTTT +
Preference number: 3 (lower is better)
Translates to: YTCLPVSPLSVS*LDDSHSFLAWF
Trigger: AAACCAGGCCAGGAAGCTGTGGCTGTCATCTAAGCAAGAGACAGACAATGGTGACACAGGGAGGCAAGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CAA 90 bp CCTCTCTTCCTTGTGACTATGACCAAGTCTTACTCCTTCCTGGACCTTCATTTCGAAGTACGGGCTTCTTaGCTTGCGATTTCTCCTCTC +
Preference number: 3 (lower is better)
Translates to: PLFLVTMTKSYSFLDLHFEVRAS*LAISPL
Trigger: GAGAGGAGAAATCGCAAGCAAAGAAGCCCGTACTTC...GAAATGAAGGTCCAGGAAGGAGTAAGACTTGGTCATAGTCACAAGGAAGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CAA 90 bp TCACTTTCATTAGGAACCGGGACGAATAATCCAACTGAGCTGCCTCTGCACCAGTTCAAAGTCAAATGCTaGGCTTGGAGACAGGGATTT +
Preference number: 3 (lower is better)
Translates to: SLSLGTGTNNPTELPLHQFKVKC*AWRQGF
Trigger: AAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGAA...CTGGTGCAGAGGCAGCTCAGTTGGATTATTCGTCCCGGTTCCTAATGAAAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 72 bp ACCAAGTTACACTGCTTCAAAGTCAAATGCTTGGCTTaGAGACAGGGATTTATCTTGGGATCGCAGGCCCTT +
Preference number: 3 (lower is better)
Translates to: TKLHCFKVKCLA*RQGFILGSQAL
Trigger: AAGGGCCTGCGATCCCAAGATAAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGAAGCAGTGTAACTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CCA 72 bp TCCTCACCAAGTTACACTGCTTCAAAGTCAAATGCTTaGCTTGGAGACAGGGATTTATCTTGGGATCGCAGG +
Preference number: 3 (lower is better)
Translates to: SSPSYTASKSNA*LGDRDLSWDRR
Trigger: CCTGCGATCCCAAGATAAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGAAGCAGTGTAACTTGGTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 72 bp GCCTCCACTTCCCCATTCTGTGCCTCCATTTATTTGTaGGACAGGGATAAAGAGGTCTGCCACTTTTATTGT +
Preference number: 3 (lower is better)
Translates to: ASTSPFCASIYL*DRDKEVCHFYC
Trigger: ACAATAAAAGTGGCAGACCTCTTTATCCCTGTCTCACAAATAAATGGAGGCACAGAATGGGGAAGTGGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 72 bp ACGTTCCTCACCAAGTTACACTGCTTCAAAGTCAAATaGTTGGCTTGGAGACAGGGATTTATCTTGGGATCG +
Preference number: 3 (lower is better)
Translates to: TFLTKLHCFKVK*LAWRQGFILGS
Trigger: CGATCCCAAGATAAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGAAGCAGTGTAACTTGGTGAGGAACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CAA 90 bp TGGCTCTTAACCATGACCCTAATACTGCCTCCTCAAGTAGGTGCTCAGCAAATGTTGCCAGAGTCATTTTaGCAAAATGGGAATGGGATT +
Preference number: 3 (lower is better)
Translates to: WLLTMTLILPPQVGAQQMLPESF*QNGNGI
Trigger: AATCCCATTCCCATTTTGCAAAAATGACTCTGGCAA...CATTTGCTGAGCACCTACTTGAGGAGGCAGTATTAGGGTCATGGTTAAGAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR GCA 72 bp ATTTTTGCAAAATGGGAATGGGATTGTGTCATCTCCTaGCTAGAACCTTCCAATGGCTTTCCACTGCTCTTG +
Preference number: 3 (lower is better)
Translates to: IFAKWEWDCVIS*LEPSNGFPLLL
Trigger: CAAGAGCAGTGGAAAGCCATTGGAAGGTTCTAGGCAGGAGATGACACAATCCCATTCCCATTTTGCAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CAA 90 bp CTTATAAGAACAGTAAGAGATAAATGTTTAAGTCCCCCAGCCTATGGTGTTCTGTTCCTAAAGGAGCCCTaGCCCACCATATCTCAGCAT +
Preference number: 3 (lower is better)
Translates to: LIRTVRDKCLSPPAYGVLFLKEP*PTISQH
Trigger: ATGCTGAGATATGGTGGGCAAGGGCTCCTTTAGGAA...CAGAACACCATAGGCTGGGGGACTTAAACATTTATCTCTTACTGTTCTTATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CAA 90 bp GCGTTTGCTGCAAAATATGTCGAAGCATTTGGGATTCAGTTTTTAGTTCAGAATAGACAGGGATTTATCTaGGGATCGCAGGCCCTTAGC +
Preference number: 3 (lower is better)
Translates to: AFAAKYVEAFGIQFLVQNRQGFI*GSQALS
Trigger: GCTAAGGGCCTGCGATCCCAAGATAAATCCCTGTCT...ATTCTGAACTAAAAACTGAATCCCAAATGCTTCGACATATTTTGCAGCAAACGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 72 bp GTCTTGTTCACTGTGTTCAATCACCAGGCACTGTACTaGACCAACAAGCATTCATTCTGTAAAAGAACGGAC +
Preference number: 3 (lower is better)
Translates to: VLFTVFNHQALY*TNKHSFCKRTD
Trigger: GTCCGTTCTTTTACAGAATGAATGCTTGTTGGTTCAGTACAGTGCCTGGTGATTGAACACAGTGAACAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 72 bp AGTTTGTATAATTCAGGGCTAAGAGAGCAGGACTCTTaGCATCTCACTGTCTTGAGACACATACTGGGGTTT +
Preference number: 3 (lower is better)
Translates to: SLYNSGLREQDS*HLTVLRHILGF
Trigger: AAACCCCAGTATGTGTCTCAAGACAGTGAGATGTCAAGAGTCCTGCTCTCTTAGCCCTGAATTATACAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR-3UTR CAA 90 bp CATTCTGTGCCTCCATTTATTTGTGAGACAGGGATAAAGAGGTCTGCCACTTTTTGCCAATGTTTTCATTaGGAAGGGGAAGTGTTTCTG +
Preference number: 3 (lower is better)
Translates to: HSVPPFICETGIKRSATFCQCFH*EGEVFL
Trigger: CAGAAACACTTCCCCTTCCAAATGAAAACATTGGCA...AAAAGTGGCAGACCTCTTTATCCCTGTCTCACAAATAAATGGAGGCACAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 72 bp CAGGAGTGCGATACAATCAATGCTCAGTACAGATTTTaGATGGATTCCATAGGTTCTACTTTTGAGAGTTGT +
Preference number: 3 (lower is better)
Translates to: QECDTINAQYRF*MDSIGSTFESC
Trigger: ACAACTCTCAAAAGTAGAACCTATGGAATCCATTCAAAATCTGTACTGAGCATTGATTGTATCGCACTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR TCA 72 bp GTACAGATTTTGAATGGATTCCATAGGTTCTACTTTTaGGAGTTGTTCTCAGTCTGTTCATGTTTCTCTATC +
Preference number: 3 (lower is better)
Translates to: VQILNGFHRFYF*ELFSVCSCFSI
Trigger: GATAGAGAAACATGAACAGACTGAGAACAACTCTCAAAAGTAGAACCTATGGAATCCATTCAAAATCTGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp CGGAGGAGAAGCCTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCTCCCTCAAACCCTCAGTaGTGTGGCCAGGGAACCGGG +
Preference number: 4 (lower is better)
Translates to: RRRSLREGCVSGLGIPPSPSNPQ*CGQGTG
Trigger: CCCGGTTCCCTGGCCACAGCACTGAGGGTTTGAGGG...AGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAGGCTTCTCCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp AACCCGCCCTCATCCTGTTCAGAGAGGGCACTTACAGGCCTCGGAGGCAGGGGAGAGAAAGAGCAGGACTaGCTACCGGCGTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: NPPSSCSERALTGLGGRGEKEQD*LPAFPC
Trigger: GCAGGGGAACGCCGGTAGTCAGTCCTGCTCTTTCTC...TCCCCTGCCTCCGAGGCCTGTAAGTGCCCTCTCTGAACAGGATGAGGGCGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp TTCCTCGGCACTTGGGGGCAAGGCCTCCTTGGCTTGGATTTGAGGGTGGGGAGGAGAACTGCTGGGACGTaGAGACTCTCCCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: FLGTWGQGLLGLDLRVGRRTAGT*RLSLAP
Trigger: GGGAGCCAGGGAGAGTCTTCACGTCCCAGCAGTTCT...CCTCCCCACCCTCAAATCCAAGCCAAGGAGGCCTTGCCCCCAAGTGCCGAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp CGGAGGAGAAGCCTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCTCACCAGCTCCCTGCCTaGCTGTTCTGTGAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: RRRSLREGCVSGLGIPPSHQLPA*LFCEGS
Trigger: GCTCCCTTCACAGAACAGGCAGGCAGGGAGCTGGTG...AGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAGGCTTCTCCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp GGAATTCCTCCCTCTCCCTTGCTAGCGCCCCAACCCGCCCTCATCCTGTTCAGAGGTGTGCAGAGCACCTaGCACACACTCCCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GIPPSPLLAPQPALILFRGVQST*HTLPLA
Trigger: TGCCAGGGGGAGTGTGTGCCAGGTGCTCTGCACACC...TCTGAACAGGATGAGGGCGGGTTGGGGCGCTAGCAAGGGAGAGGGAGGAATTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CCTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCTCCCTTGCTAGCGGGGCAAGGCCTCCTTaGCTTGGATTTGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PEGGVCIRPGNSSLSLASGARPP*LGFEGG
Trigger: CCCACCCTCAAATCCAAGCCAAGGAGGCCTTGCCCC...GCTAGCAAGGGAGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CAA 72 bp GGGTGTGTATCCGGCCTGGGAATTCCTCCCTCTCCCTaGCTAGCGCCCCAACCCGCCCTCATCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: GCVSGLGIPPSP*LAPQPALILFR
Trigger: TCTGAACAGGATGAGGGCGGGTTGGGGCGCTAGCAAGGGAGAGGGAGGAATTCCCAGGCCGGATACACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp CGGAGGAGAAGCCTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCTGCCACAGTACAAAGGTaGTTCGTGCCTGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RRRSLREGCVSGLGIPPSATVQR*FVPGSL
Trigger: CAGGGAGCCAGGCACGAATCACCTTTGTACTGTGGC...AGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAGGCTTCTCCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp AACCCGCCCTCATCCTGTTCAGAGAGGGCACTTACAGGCCTCGGAGGCAGGGGAAGACCCTGTGCCCAGTaGCACTCCAGTACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: NPPSSCSERALTGLGGRGRPCAQ*HSSTVQ
Trigger: CTGGACAGTACTGGAGTGTCACTGGGCACAGGGTCT...TCCCCTGCCTCCGAGGCCTGTAAGTGCCCTCTCTGAACAGGATGAGGGCGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp GGAATTCCTCCCTCTCCCTTGCTAGCGCCCCAACCCGCCCTCATCCTGTTCAGACATACCCTGGGGTTCTaGGCTTCCTCGGCACTTGGG +
Preference number: 4 (lower is better)
Translates to: GIPPSPLLAPQPALILFRHTLGF*ASSALG
Trigger: CCCAAGTGCCGAGGAAGCTCAGAACCCCAGGGTATG...TCTGAACAGGATGAGGGCGGGTTGGGGCGCTAGCAAGGGAGAGGGAGGAATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp TCCTCCACGCTGGTGACAGGCTATGTGGCAGGAGGGTCTCTACCTTATCTCAGAGGCATGGCTGGGGTCTaGCTGTCTCCTGGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: SSTLVTGYVAGGSLPYLRGMAGV*LSPGGR
Trigger: CCGGCCACCAGGAGACAGCCAGACCCCAGCCATGCC...TCTGAGATAAGGTAGAGACCCTCCTGCCACATAGCCTGTCACCAGCGTGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469379.5
CDS-3UTR CCA 90 bp GGCCTGGAGATGAGGCTCGGTCAGATCATCTTGAGGTCTTTCCTGGCGGCTTCCGGCTATCCAGGGTTCTaGTGCCCTGGGGACCACAGG +
Preference number: 4 (lower is better)
Translates to: GLEMRLGQIILRSFLAASGYPGF*CPGDHR
Trigger: CCTGTGGTCCCCAGGGCACCAGAACCCTGGATAGCC...GGAAGCCGCCAGGAAAGACCTCAAGATGATCTGACCGAGCCTCATCTCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp TTGGCAAAGCCAGGTAATGCAGGAGAGGGGTGGACTCAGCCTGCTTGCGGTGAATTCCTGCATCCGCCCTaGCCCCTGGCTGTGGGATCT +
Preference number: 4 (lower is better)
Translates to: LAKPGNAGEGWTQPACGEFLHPP*PLAVGS
Trigger: AGATCCCACAGCCAGGGGTCAGGGCGGATGCAGGAA...TTCACCGCAAGCAGGCTGAGTCCACCCCTCTCCTGCATTACCTGGCTTTGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp CTAGGAAAACCACAGAGCCGGCTATCCAGGGTTCTGGTGCCCTGGGGACCACAGCAAGGACCTTCTGGGTaGGCCTCATGTCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LGKPQSRLSRVLVPWGPQQGPSG*ASCQEQ
Trigger: CTGCTCCTGACATGAGGCTCACCCAGAAGGTCCTTG...CTGTGGTCCCCAGGGCACCAGAACCCTGGATAGCCGGCTCTGTGGTTTTCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp GGAACCGGGCTGGCAGTCTTAGTTGGCTTTGTTCCCTCGGCCTCCACTTCCCCAGTCCAGGGCATGGGTTaGGGATCGTGTAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GTGLAVLVGFVPSASTSPVQGMG*GSCREE
Trigger: CTCTTCCCTACACGATCCGCAACCCATGCCCTGGAC...TGGGGAAGTGGAGGCCGAGGGAACAAAGCCAACTAAGACTGCCAGCCCGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp GGAATTCCTCCCTCTCCCTTGCTAGCGCCCCAACCCGCCCTCATCCTGTTCAGACAGCATCTGAGGTGGTaGCCCTGCTTCCCCTCTTAC +
Preference number: 4 (lower is better)
Translates to: GIPPSPLLAPQPALILFRQHLRW*PCFPSY
Trigger: GTAAGAGGGGAAGCAGGGCCACCACCTCAGATGCTG...TCTGAACAGGATGAGGGCGGGTTGGGGCGCTAGCAAGGGAGAGGGAGGAATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CATCTTGAGGTCTTTCCTGGCGGCTTCCCTGCTGCTAGCTACCCCTCTCATACCAGACCTGGACCTCCCTaGCACTCAGGCAGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: HLEVFPGGFPAASYPSHTRPGPP*HSGSLS
Trigger: GGACAGGCTGCCTGAGTGCCAGGGAGGTCCAGGTCT...GGTATGAGAGGGGTAGCTAGCAGCAGGGAAGCCGCCAGGAAAGACCTCAAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CGGAGGAGAAGCCTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCTTGGCCAAGGACCTTCTaGGTGAGCCTCATGTCAGGA +
Preference number: 4 (lower is better)
Translates to: RRRSLREGCVSGLGIPPSWPRTF*VSLMSG
Trigger: TCCTGACATGAGGCTCACCCAGAAGGTCCTTGGCCA...AGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAGGCTTCTCCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp CGGAGGAGAAGCCTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCTTCGGTCAGATCATCTTaGGGTCTTTCCTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: RRRSLREGCVSGLGIPPSSVRSS*GLSWRL
Trigger: AAGCCGCCAGGAAAGACCTCAAGATGATCTGACCGA...AGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAGGCTTCTCCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp GGAACCGGGCTGGCAGTCTTAGTTGGCTTTGTTCCCTCGGCCTCCACTTCCCCAGAGGAGGGAAGGCTGTaGATGGCTTCCACCACTTCT +
Preference number: 4 (lower is better)
Translates to: GTGLAVLVGFVPSASTSPEEGRL*MASTTS
Trigger: AGAAGTGGTGGAAGCCATGCACAGCCTTCCCTCCTC...TGGGGAAGTGGAGGCCGAGGGAACAAAGCCAACTAAGACTGCCAGCCCGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp GGCCTGGAGATGAGGCTCGGTCAGATCATCTTGAGGTCTTTCCTGGCGGCTTCCCAACTGAGCTGCCTCTaGACCAGAACTGCTGGGACG +
Preference number: 4 (lower is better)
Translates to: GLEMRLGQIILRSFLAASQLSCL*TRTAGT
Trigger: CGTCCCAGCAGTTCTGGTGCAGAGGCAGCTCAGTTG...GGAAGCCGCCAGGAAAGACCTCAAGATGATCTGACCGAGCCTCATCTCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CTAGGAAAACCACAGAGCCGGCTATCCAGGGTTCTGGTGCCCTGGGGACCACAGCTCCTCTCACAGCTTTaGCCTAGAGCCCCTGCACTT +
Preference number: 4 (lower is better)
Translates to: LGKPQSRLSRVLVPWGPQLLSQL*PRAPAL
Trigger: AAGTGCAGGGGCTCTAGGCCAAAGCTGTGAGAGGAG...CTGTGGTCCCCAGGGCACCAGAACCCTGGATAGCCGGCTCTGTGGTTTTCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp TCCTCCACGCTGGTGACAGGCTATGTGGCAGGAGGGTCTCTACCTTATCTCAGAGATCCTCCACGCTGGTaGCAGGCTATGTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SSTLVTGYVAGGSLPYLRDPPRW*QAMWQE
Trigger: CTCCTGCCACATAGCCTGTCACCAGCGTGGAGGATC...TCTGAGATAAGGTAGAGACCCTCCTGCCACATAGCCTGTCACCAGCGTGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469379.5
CDS-3UTR TCA 90 bp TGGTTGTCTTGGCAAAGCCAGGTAATGCAGGAGAGGGGTGGACTCAGCCTGCTTAACGGAGGAGAAGCCTaGGGGAGGGGTGTGTATCCG +
Preference number: 4 (lower is better)
Translates to: WLSWQSQVMQERGGLSLLNGGEA*GRGVYP
Trigger: CGGATACACACCCCTCCCTCAGGCTTCTCCTCCGTT...AAGCAGGCTGAGTCCACCCCTCTCCTGCATTACCTGGCTTTGCCAAGACAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp CCTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCTCCCTTGCTAGCTCAGCCTGCTTGCGGTaGATGGCATTAGTGTCCATT +
Preference number: 4 (lower is better)
Translates to: PEGGVCIRPGNSSLSLASSACLR*MALVSI
Trigger: AATGGACACTAATGCCATTCACCGCAAGCAGGCTGA...GCTAGCAAGGGAGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp CTAGGAAAACCACAGAGCCGGCTATCCAGGGTTCTGGTGCCCTGGGGACCACAGTGCACCTGTTCATCTTaGGATTCATCCTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LGKPQSRLSRVLVPWGPQCTCSS*DSSWAP
Trigger: TGGGGCCCAGGATGAATCTCAAGATGAACAGGTGCA...CTGTGGTCCCCAGGGCACCAGAACCCTGGATAGCCGGCTCTGTGGTTTTCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp CATCCAAGCCTCTGTCACCTCTGGCCTGGACAACTAACAGCATCTGAGGTGGTGCTGAGGTGGTGGCCCTaGTTCCCCTCTTACCCCTCA +
Preference number: 4 (lower is better)
Translates to: HPSLCHLWPGQLTASEVVLRWWP*FPSYPS
Trigger: TGAGGGGTAAGAGGGGAAGCAGGGCCACCACCTCAG...CACCACCTCAGATGCTGTTAGTTGTCCAGGCCAGAGGTGACAGAGGCTTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp GGCCTGGAGATGAGGCTCGGTCAGATCATCTTGAGGTCTTTCCTGGCGGCTTCCACACCCCGAGAGCTTTaGAAGGGTGTCCCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: GLEMRLGQIILRSFLAASTPREL*KGVPER
Trigger: TCTCTCAGGGACACCCTTGCAAAGCTCTCGGGGTGT...GGAAGCCGCCAGGAAAGACCTCAAGATGATCTGACCGAGCCTCATCTCCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp AGGAGGGTCTCTACCTTATCTCAGAATGAAGGCATGGCTGGGGTCTGGCTGTCTCTGGCTGTCTCCTGGTaGCCGGAAGGAGACAGACGG +
Preference number: 4 (lower is better)
Translates to: RRVSTLSQNEGMAGVWLSLAVSW*PEGDRR
Trigger: CCGTCTGTCTCCTTCCGGCCACCAGGAGACAGCCAG...AGACAGCCAGACCCCAGCCATGCCTTCATTCTGAGATAAGGTAGAGACCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469379.5
CDS-3UTR CCA 90 bp TTCCTCGGCACTTGGGGGCAAGGCCTCCTTGGCTTGGATTTGAGGGTGGGGAGGCTCTCACATACACAGTaGGCTGGATGCTGGATGCAA +
Preference number: 4 (lower is better)
Translates to: FLGTWGQGLLGLDLRVGRLSHTQ*AGCWMQ
Trigger: TTGCATCCAGCATCCAGCCCACTGTGTATGTGAGAG...CCTCCCCACCCTCAAATCCAAGCCAAGGAGGCCTTGCCCCCAAGTGCCGAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CATCTTGAGGTCTTTCCTGGCGGCTTCCCTGCTGCTAGCTACCCCTCTCATACCGGCACACACTCCCCCTaGCACTTGGTTCTCGCTAAG +
Preference number: 4 (lower is better)
Translates to: HLEVFPGGFPAASYPSHTGTHSP*HLVLAK
Trigger: CTTAGCGAGAACCAAGTGCCAGGGGGAGTGTGTGCC...GGTATGAGAGGGGTAGCTAGCAGCAGGGAAGCCGCCAGGAAAGACCTCAAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp GGAACCGGGCTGGCAGTCTTAGTTGGCTTTGTTCCCTCGGCCTCCACTTCCCCAAGCCTCTGTCACCTCTaGCCTGGACAACTAACAGCA +
Preference number: 4 (lower is better)
Translates to: GTGLAVLVGFVPSASTSPSLCHL*PGQLTA
Trigger: TGCTGTTAGTTGTCCAGGCCAGAGGTGACAGAGGCT...TGGGGAAGTGGAGGCCGAGGGAACAAAGCCAACTAAGACTGCCAGCCCGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp TCCCCCAAAAGCCAAGGTCATCATCAAGCCAGGATGAGGACTGGAGGAGGAGCTGACCTAAGAGCCCCCTaGGCGCTTGCAAACACTGCA +
Preference number: 4 (lower is better)
Translates to: SPKSQGHHQARMRTGGGADLRAP*ALANTA
Trigger: TGCAGTGTTTGCAAGCGCTCAGGGGGCTCTTAGGTC...AGCTCCTCCTCCAGTCCTCATCCTGGCTTGATGATGACCTTGGCTTTTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp ATCTTCACTAAACTCCCCTCATCCAAGCCTCTGTCACCTCTGGCCTGGACAACTTCCAGTCTCAGGGGCTaGGCCAAGGCGTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: IFTKLPSSKPLSPLAWTTSSLRG*AKAFLP
Trigger: AGGCAGGAACGCCTTGGCTCAGCCCCTGAGACTGGA...AGTTGTCCAGGCCAGAGGTGACAGAGGCTTGGATGAGGGGAGTTTAGTGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp GTTTTCTCCTGTCTGAAGACGCAGCTGGCACCAATGTACCCTATGGCCAAGGACTCCCACCCACCTCACTaGCCTTTCCTGGGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: VFSCLKTQLAPMYPMAKDSHPPH*PFLGLF
Trigger: GAACAGCCCCAGGAAAGGTCAGTGAGGTGGGTGGGA...GTCCTTGGCCATAGGGTACATTGGTGCCAGCTGCGTCTTCAGACAGGAGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp CCTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCTCCCTTGCTAGCAGAGAGCAGGACTCTTaGCATCTCACTGTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: PEGGVCIRPGNSSLSLASREQDS*HLTVLR
Trigger: TCTCAAGACAGTGAGATGTCAAGAGTCCTGCTCTCT...GCTAGCAAGGGAGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp TCCTCCACGCTGGTGACAGGCTATGTGGCAGGAGGGTCTCTACCTTATCTCAGAGAAGCTGCCTGTCTCTaGACAGGTCCATGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSTLVTGYVAGGSLPYLREAACL*TGPCPG
Trigger: GCCTGGACATGGACCTGTGCAGAGACAGGCAGCTTC...TCTGAGATAAGGTAGAGACCCTCCTGCCACATAGCCTGTCACCAGCGTGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469379.5
CDS-3UTR CCA 90 bp CTCCACGCTGGTGACAGGCTATGTGGCAGGAGGGTCTCTACCTTATCTCAGAATGGTCTGGCTGTCTCCTaGTGGCCGGAAGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: LHAGDRLCGRRVSTLSQNGLAVS*WPEGDR
Trigger: TCTGTCTCCTTCCGGCCACCAGGAGACAGCCAGACC...ATTCTGAGATAAGGTAGAGACCCTCCTGCCACATAGCCTGTCACCAGCGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469379.5
CDS-3UTR CCA 90 bp TGGTTGTCTTGGCAAAGCCAGGTAATGCAGGAGAGGGGTGGACTCAGCCTGCTTCAGTGGGCTGGATGCTaGATGCAAAGCTCCCTCGTC +
Preference number: 4 (lower is better)
Translates to: WLSWQSQVMQERGGLSLLQWAGC*MQSSLV
Trigger: GACGAGGGAGCTTTGCATCCAGCATCCAGCCCACTG...AAGCAGGCTGAGTCCACCCCTCTCCTGCATTACCTGGCTTTGCCAAGACAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp GGAACCGGGCTGGCAGTCTTAGTTGGCTTTGTTCCCTCGGCCTCCACTTCCCCAACTCCCCCTGGCACTTaGTTCTCGCTAAGATGTTAC +
Preference number: 4 (lower is better)
Translates to: GTGLAVLVGFVPSASTSPTPPGT*FSLRCY
Trigger: GTAACATCTTAGCGAGAACCAAGTGCCAGGGGGAGT...TGGGGAAGTGGAGGCCGAGGGAACAAAGCCAACTAAGACTGCCAGCCCGGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CATCTTGAGGTCTTTCCTGGCGGCTTCCCTGCTGCTAGCTACCCCTCTCATACCAAAAGAACGGACGGATaGATGGCAGGCAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: HLEVFPGGFPAASYPSHTKRTDG*MAGRQA
Trigger: TGCCTGCCTGCCTGCCATCCATCCGTCCGTTCTTTT...GGTATGAGAGGGGTAGCTAGCAGCAGGGAAGCCGCCAGGAAAGACCTCAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp AGGAGGGTCTCTACCTTATCTCAGAATGAAGGCATGGCTGGGGTCTGGCTGTCTCAGGTGCAGCCATTCTaGTCCTCCACGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: RRVSTLSQNEGMAGVWLSQVQPF*SSTLVT
Trigger: TGTCACCAGCGTGGAGGATCAGAATGGCTGCACCTG...AGACAGCCAGACCCCAGCCATGCCTTCATTCTGAGATAAGGTAGAGACCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469379.5
CDS-3UTR TCA 90 bp GGACCACAGGGCAGCAAGAAAGTTCTCCTAAGGGTCCTGGGGCTGGGAAGGCAGAGTCTGTTGAATGAGTaGGTGCATATGCAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: GPQGSKKVLLRVLGLGRQSLLNE*VHMQRA
Trigger: GGCCCTTTGCATATGCACTCACTCATTCAACAGACT...CTGCCTTCCCAGCCCCAGGACCCTTAGGAGAACTTTCTTGCTGCCCTGTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp TGGTTGTCTTGGCAAAGCCAGGTAATGCAGGAGAGGGGTGGACTCAGCCTGCTTCCTCAGCTCCAAATCTaGGCTGCACCAGGACAAGCT +
Preference number: 4 (lower is better)
Translates to: WLSWQSQVMQERGGLSLLPQLQI*AAPGQA
Trigger: AGCTTGTCCTGGTGCAGCTCAGATTTGGAGCTGAGG...AAGCAGGCTGAGTCCACCCCTCTCCTGCATTACCTGGCTTTGCCAAGACAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp CGGAGGAGAAGCCTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCTGACATCTCACTGTCTTaGGACACATACTGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: RRRSLREGCVSGLGIPPSDISLS*DTYWGF
Trigger: AAAACCCCAGTATGTGTCTCAAGACAGTGAGATGTC...AGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAGGCTTCTCCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp CATCTTGAGGTCTTTCCTGGCGGCTTCCCTGCTGCTAGCTACCCCTCTCATACCGGCAAAACAGACACATaGGCTGTAAGTGGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: HLEVFPGGFPAASYPSHTGKTDT*AVSGAD
Trigger: GTCTGCCCCACTTACAGCTCATGTGTCTGTTTTGCC...GGTATGAGAGGGGTAGCTAGCAGCAGGGAAGCCGCCAGGAAAGACCTCAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp GGACCACAGGGCAGCAAGAAAGTTCTCCTAAGGGTCCTGGGGCTGGGAAGGCAGTTGGAAGAGTGCGTATaGAATAGGCCTGGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: GPQGSKKVLLRVLGLGRQLEECV*NRPGRN
Trigger: GTTTCTGCCAGGCCTATTTCATACGCACTCTTCCAA...CTGCCTTCCCAGCCCCAGGACCCTTAGGAGAACTTTCTTGCTGCCCTGTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp CAATGGCTTTCCACTGCTCTTGGCTATGGCCTTCCAGGTCCTCCATGGTATGGCAGCCCCCTGAGCGCTTaGAAACACTGCAGACAAAGC +
Preference number: 4 (lower is better)
Translates to: QWLSTALGYGLPGPPWYGSPLSA*KHCRQS
Trigger: GCTTTGTCTGCAGTGTTTGCAAGCGCTCAGGGGGCT...GCCATACCATGGAGGACCTGGAAGGCCATAGCCAAGAGCAGTGGAAAGCCATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp TGGTTGTCTTGGCAAAGCCAGGTAATGCAGGAGAGGGGTGGACTCAGCCTGCTTACACAGTGGGCTGGATaGTGGATGCAAAGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: WLSWQSQVMQERGGLSLLTQWAG*WMQSSL
Trigger: GAGGGAGCTTTGCATCCAGCATCCAGCCCACTGTGT...AAGCAGGCTGAGTCCACCCCTCTCCTGCATTACCTGGCTTTGCCAAGACAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp TCCTCCACGCTGGTGACAGGCTATGTGGCAGGAGGGTCTCTACCTTATCTCAGACTCAGAATGAAGGCATaGCTGGGGTCTGGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SSTLVTGYVAGGSLPYLRLRMKA*LGSGCL
Trigger: GAGACAGCCAGACCCCAGCCATGCCTTCATTCTGAG...TCTGAGATAAGGTAGAGACCCTCCTGCCACATAGCCTGTCACCAGCGTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469379.5
CDS-3UTR CCA 90 bp TCACTTTCATTAGGAACCGGGACGAATAATCCAACTGAGCTGCCTCTGCACCAGAGACAAAGCGAGCCCTaGCACCAGCTCCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SLSLGTGTNNPTELPLHQRQSEP*HQLPAC
Trigger: GCAGGCAGGGAGCTGGTGCCAGGGCTCGCTTTGTCT...CTGGTGCAGAGGCAGCTCAGTTGGATTATTCGTCCCGGTTCCTAATGAAAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp AGAAATCTCACTGTGAACCCATTAGGAGAGCCCTCTGCCGCCAGCTATGCTGTCAATGCAGGAGAGGGGTaGACTCAGCCTGCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: RNLTVNPLGEPSAASYAVNAGEG*TQPACG
Trigger: ACCGCAAGCAGGCTGAGTCCACCCCTCTCCTGCATT...GACAGCATAGCTGGCGGCAGAGGGCTCTCCTAATGGGTTCACAGTGAGATTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CAATGGCTTTCCACTGCTCTTGGCTATGGCCTTCCAGGTCCTCCATGGTATGGCGCTTTCCACTGCTCTTaGCTATGGCCTTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: QWLSTALGYGLPGPPWYGAFHCS*LWPSRS
Trigger: GGACCTGGAAGGCCATAGCCAAGAGCAGTGGAAAGC...GCCATACCATGGAGGACCTGGAAGGCCATAGCCAAGAGCAGTGGAAAGCCATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp TGGTTGTCTTGGCAAAGCCAGGTAATGCAGGAGAGGGGTGGACTCAGCCTGCTTGCACAGGCCACAGATTaGCAAGGAGGGACCAGGTTA +
Preference number: 4 (lower is better)
Translates to: WLSWQSQVMQERGGLSLLAQATD*QGGTRL
Trigger: TAACCTGGTCCCTCCTTGCCAATCTGTGGCCTGTGC...AAGCAGGCTGAGTCCACCCCTCTCCTGCATTACCTGGCTTTGCCAAGACAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CATCTTGAGGTCTTTCCTGGCGGCTTCCCTGCTGCTAGCTACCCCTCTCATACCCACCAATGTACCCTATaGCCAAGGACCTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: HLEVFPGGFPAASYPSHTHQCTL*PRTFWV
Trigger: CACCCAGAAGGTCCTTGGCCATAGGGTACATTGGTG...GGTATGAGAGGGGTAGCTAGCAGCAGGGAAGCCGCCAGGAAAGACCTCAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CGGAGGAGAAGCCTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCTACCCTGCCTGTTTCTTaGCTGAAATCTCCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: RRRSLREGCVSGLGIPPSTLPVS*LKSPVC
Trigger: ACAAACTGGAGATTTCAGCCAAGAAACAGGCAGGGT...AGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAGGCTTCTCCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp ACCAAGTGCCAAAGGGCCAAGGCTTGGTCTGTCTTGTTCACTGTGTTCAATCACTTCCAAGGTCGGGGATaGGGAGCCCTCACTGGAGGC +
Preference number: 4 (lower is better)
Translates to: TKCQRAKAWSVLFTVFNHFQGRG*GALTGG
Trigger: GCCTCCAGTGAGGGCTCCCCATCCCCGACCTTGGAA...GTGATTGAACACAGTGAACAAGACAGACCAAGCCTTGGCCCTTTGGCACTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp GGCCTGGAGATGAGGCTCGGTCAGATCATCTTGAGGTCTTTCCTGGCGGCTTCCTTGCAAGGGTGTCCCTaGGAGATATTTCCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: GLEMRLGQIILRSFLAASLQGCP*EIFPGV
Trigger: AACACCAGGAAATATCTCTCAGGGACACCCTTGCAA...GGAAGCCGCCAGGAAAGACCTCAAGATGATCTGACCGAGCCTCATCTCCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp GTTTTCTCCTGTCTGAAGACGCAGCTGGCACCAATGTACCCTATGGCCAAGGACAAAGGGGCCTGGAGATaGGGCTCGGTCAGATCATCT +
Preference number: 4 (lower is better)
Translates to: VFSCLKTQLAPMYPMAKDKGAWR*GSVRSS
Trigger: AGATGATCTGACCGAGCCTCATCTCCAGGCCCCTTT...GTCCTTGGCCATAGGGTACATTGGTGCCAGCTGCGTCTTCAGACAGGAGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp TCCTCCACGCTGGTGACAGGCTATGTGGCAGGAGGGTCTCTACCTTATCTCAGATTTGAGGGGAGCAGGTaGAGCCATTCTGATCCTCCA +
Preference number: 4 (lower is better)
Translates to: SSTLVTGYVAGGSLPYLRFEGSR*SHSDPP
Trigger: TGGAGGATCAGAATGGCTGCACCTGCTCCCCTCAAA...TCTGAGATAAGGTAGAGACCCTCCTGCCACATAGCCTGTCACCAGCGTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469379.5
CDS-3UTR CCA 90 bp CAATGGCTTTCCACTGCTCTTGGCTATGGCCTTCCAGGTCCTCCATGGTATGGCGGCTTAAGAGGAGTCTaGCCATTCCTGGCATCCAGT +
Preference number: 4 (lower is better)
Translates to: QWLSTALGYGLPGPPWYGGLRGV*PFLASS
Trigger: ACTGGATGCCAGGAATGGCCAGACTCCTCTTAAGCC...GCCATACCATGGAGGACCTGGAAGGCCATAGCCAAGAGCAGTGGAAAGCCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CAATGGCTTTCCACTGCTCTTGGCTATGGCCTTCCAGGTCCTCCATGGTATGGCAAGGTGATTCGTGCCTaGCTCCCTGTGTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: QWLSTALGYGLPGPPWYGKVIRA*LPVSSD
Trigger: GTCAGAAGACACAGGGAGCCAGGCACGAATCACCTT...GCCATACCATGGAGGACCTGGAAGGCCATAGCCAAGAGCAGTGGAAAGCCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp ATCTTCACTAAACTCCCCTCATCCAAGCCTCTGTCACCTCTGGCCTGGACAACTAGGTCCTCCATGGTATaGCTCCCACCCACCTCACTG +
Preference number: 4 (lower is better)
Translates to: IFTKLPSSKPLSPLAWTTRSSMV*LPPTSL
Trigger: CAGTGAGGTGGGTGGGAGCCATACCATGGAGGACCT...AGTTGTCCAGGCCAGAGGTGACAGAGGCTTGGATGAGGGGAGTTTAGTGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp AGAAATCTCACTGTGAACCCATTAGGAGAGCCCTCTGCCGCCAGCTATGCTGTCAGGGAAGGCTGTGCATaGCTTCCACCACTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RNLTVNPLGEPSAASYAVREGCA*LPPLLQ
Trigger: CTGGAGAAGTGGTGGAAGCCATGCACAGCCTTCCCT...GACAGCATAGCTGGCGGCAGAGGGCTCTCCTAATGGGTTCACAGTGAGATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CAATGGCTTTCCACTGCTCTTGGCTATGGCCTTCCAGGTCCTCCATGGTATGGCTCCTGGATTGGCGTGTaGGGAACACATGTGACCACA +
Preference number: 4 (lower is better)
Translates to: QWLSTALGYGLPGPPWYGSWIGV*GTHVTT
Trigger: TGTGGTCACATGTGTTCCCCACACGCCAATCCAGGA...GCCATACCATGGAGGACCTGGAAGGCCATAGCCAAGAGCAGTGGAAAGCCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp ACCAAGTGCCAAAGGGCCAAGGCTTGGTCTGTCTTGTTCACTGTGTTCAATCACCACAGCTTCCTGGCCTaGTTTCCTGCATCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: TKCQRAKAWSVLFTVFNHHSFLA*FPASAL
Trigger: CAGGGCGGATGCAGGAAACCAGGCCAGGAAGCTGTG...GTGATTGAACACAGTGAACAAGACAGACCAAGCCTTGGCCCTTTGGCACTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CAA 72 bp CAGACTGAACTAAGACACCCTCTGCCTGTGGTTGTCTaGGCAAAGCCAGGTAATGCAGGAGAGGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: QTELRHPLPVVV*AKPGNAGEGWT
Trigger: AGTCCACCCCTCTCCTGCATTACCTGGCTTTGCCAAGACAACCACAGGCAGAGGGTGTCTTAGTTCAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CAA 72 bp TTCCTGGGGCTGTTCTCCAGCCACATGGGCCTCCTTTaGGTTGCGGAAAAACCAACTCTCTCTCACCTGAAG +
Preference number: 4 (lower is better)
Translates to: FLGLFSSHMGLL*VAEKPTLSHLK
Trigger: CTTCAGGTGAGAGAGAGTTGGTTTTTCCGCAACCAAAAGGAGGCCCATGTGGCTGGAGAACAGCCCCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CAA 72 bp CAGGCCTGGGGGTATACTTGCCTCCCTGTGTCACCATaGTCTGTCTCTTGCTTAGATGACAGCCACAGCTTC +
Preference number: 4 (lower is better)
Translates to: QAWGYTCLPVSP*SVSCLDDSHSF
Trigger: GAAGCTGTGGCTGTCATCTAAGCAAGAGACAGACAATGGTGACACAGGGAGGCAAGTATACCCCCAGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp TCACTTTCATTAGGAACCGGGACGAATAATCCAACTGAGCTGCCTCTGCACCAGAGGTCTTGGCACCACTaGTTCCCTCAGCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: SLSLGTGTNNPTELPLHQRSWHH*FPQPGL
Trigger: CAGTCCAGGCTGAGGGAATCAGTGGTGCCAAGACCT...CTGGTGCAGAGGCAGCTCAGTTGGATTATTCGTCCCGGTTCCTAATGAAAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp TATGCAAAGGGCCTAGACACAGGAGTGCGATACAATCAATGCTCAGTACAGATTCCCAGGGTCAGGCCCTaGCACCCCGAGAGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: YAKGLDTGVRYNQCSVQIPRVRP*HPESFA
Trigger: TGCAAAGCTCTCGGGGTGTCAGGGCCTGACCCTGGG...AATCTGTACTGAGCATTGATTGTATCGCACTCCTGTGTCTAGGCCCTTTGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp TGGTTGTCTTGGCAAAGCCAGGTAATGCAGGAGAGGGGTGGACTCAGCCTGCTTACGGGCTTCTTTGCTTaGGATTTCTCCTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: WLSWQSQVMQERGGLSLLTGFFA*DFSSHS
Trigger: GCTGTGAGAGGAGAAATCGCAAGCAAAGAAGCCCGT...AAGCAGGCTGAGTCCACCCCTCTCCTGCATTACCTGGCTTTGCCAAGACAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp GGAATTCCTCCCTCTCCCTTGCTAGCGCCCCAACCCGCCCTCATCCTGTTCAGACATGTCCTTCTTGCCTaGCTTCATAGTTCCGAAAAA +
Preference number: 4 (lower is better)
Translates to: GIPPSPLLAPQPALILFRHVLLA*LHSSEK
Trigger: TTTTTCGGAACTATGAAGGCAGGCAAGAAGGACATG...TCTGAACAGGATGAGGGCGGGTTGGGGCGCTAGCAAGGGAGAGGGAGGAATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp TTCCTCGGCACTTGGGGGCAAGGCCTCCTTGGCTTGGATTTGAGGGTGGGGAGGTGCCAGAGTCATTTTTaGAAAATGGGAATGGGATTG +
Preference number: 4 (lower is better)
Translates to: FLGTWGQGLLGLDLRVGRCQSHF*KMGMGL
Trigger: CAATCCCATTCCCATTTTGCAAAAATGACTCTGGCA...CCTCCCCACCCTCAAATCCAAGCCAAGGAGGCCTTGCCCCCAAGTGCCGAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp CCTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCTCCCTTGCTAGCTGCTTAAACAGCGTTTaGTGCAAAATATGTCGAAGC +
Preference number: 4 (lower is better)
Translates to: PEGGVCIRPGNSSLSLASCLNSV*CKICRS
Trigger: GCTTCGACATATTTTGCAGCAAACGCTGTTTAAGCA...GCTAGCAAGGGAGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp TGGTTGTCTTGGCAAAGCCAGGTAATGCAGGAGAGGGGTGGACTCAGCCTGCTTCGATTCCCCATTCCCTaGTCCTGGGCAACAATTAAC +
Preference number: 4 (lower is better)
Translates to: WLSWQSQVMQERGGLSLLRFPIP*SWATIN
Trigger: GTTAATTGTTGCCCAGGAGCAGGGAATGGGGAATCG...AAGCAGGCTGAGTCCACCCCTCTCCTGCATTACCTGGCTTTGCCAAGACAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp AACCCGCCCTCATCCTGTTCAGAGAGGGCACTTACAGGCCTCGGAGGCAGGGGAAATAAGATAGACCAATaGATCGATAACCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: NPPSSCSERALTGLGGRGNKIDQ*IDNPQL
Trigger: GAGCTGAGGGTTATCGATGCATTGGTCTATCTTATT...TCCCCTGCCTCCGAGGCCTGTAAGTGCCCTCTCTGAACAGGATGAGGGCGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp GGAATTCCTCCCTCTCCCTTGCTAGCGCCCCAACCCGCCCTCATCCTGTTCAGACACTTCCCCATTCTGTaGCTCCATTTATTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: GIPPSPLLAPQPALILFRHFPIL*LHLFVR
Trigger: TCTCACAAATAAATGGAGGCACAGAATGGGGAAGTG...TCTGAACAGGATGAGGGCGGGTTGGGGCGCTAGCAAGGGAGAGGGAGGAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CAATGGCTTTCCACTGCTCTTGGCTATGGCCTTCCAGGTCCTCCATGGTATGGCCAGCTCTGCCTCAAATaGATTTGGGAGCGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: QWLSTALGYGLPGPPWYGQLCLK*IWERRL
Trigger: AAGCCTTCGCTCCCAAATCCATTTGAGGCAGAGCTG...GCCATACCATGGAGGACCTGGAAGGCCATAGCCAAGAGCAGTGGAAAGCCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp TCACTTTCATTAGGAACCGGGACGAATAATCCAACTGAGCTGCCTCTGCACCAGAGTGCAATGACCCTGTaGTGCCTTCTCCCGAGGACC +
Preference number: 4 (lower is better)
Translates to: SLSLGTGTNNPTELPLHQSAMTL*CLLPRT
Trigger: GGTCCTCGGGAGAAGGCACCACAGGGTCATTGCACT...CTGGTGCAGAGGCAGCTCAGTTGGATTATTCGTCCCGGTTCCTAATGAAAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CGGAGGAGAAGCCTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCTTCTGATTCTCTTGTTTaGGTTCCTACTAGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RRRSLREGCVSGLGIPPSSDSLV*VPTSLP
Trigger: AGGAAGACTAGTAGGAACCCAAACAAGAGAATCAGA...AGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAGGCTTCTCCTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp TGGTTGTCTTGGCAAAGCCAGGTAATGCAGGAGAGGGGTGGACTCAGCCTGCTTCTGATTCCCTCAGCCTaGACTGCTTTTCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: WLSWQSQVMQERGGLSLLLIPSA*TAFLQI
Trigger: GATCTGGAGAAAAGCAGTCCAGGCTGAGGGAATCAG...AAGCAGGCTGAGTCCACCCCTCTCCTGCATTACCTGGCTTTGCCAAGACAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp TCCCCCAAAAGCCAAGGTCATCATCAAGCCAGGATGAGGACTGGAGGAGGAGCTGACAGGGATTTATCTTaGGATCGCAGGCCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: SPKSQGHHQARMRTGGGADRDLS*DRRPLA
Trigger: TGCTAAGGGCCTGCGATCCCAAGATAAATCCCTGTC...AGCTCCTCCTCCAGTCCTCATCCTGGCTTGATGATGACCTTGGCTTTTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp AACCCGCCCTCATCCTGTTCAGAGAGGGCACTTACAGGCCTCGGAGGCAGGGGAAAGCCTAGGAAATCCTaGAATAAGATAGACCAATGC +
Preference number: 4 (lower is better)
Translates to: NPPSSCSERALTGLGGRGKPRKS*NKIDQC
Trigger: GCATTGGTCTATCTTATTCCAGGATTTCCTAGGCTT...TCCCCTGCCTCCGAGGCCTGTAAGTGCCCTCTCTGAACAGGATGAGGGCGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp TCCCCCAAAAGCCAAGGTCATCATCAAGCCAGGATGAGGACTGGAGGAGGAGCTCTGACTGTGTCCCTGTaGAAGGTTTGGGTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: SPKSQGHHQARMRTGGGALTVSL*KVWVSD
Trigger: GTCAGAAACCCAAACCTTCCACAGGGACACAGTCAG...AGCTCCTCCTCCAGTCCTCATCCTGGCTTGATGATGACCTTGGCTTTTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp TCCCCCAAAAGCCAAGGTCATCATCAAGCCAGGATGAGGACTGGAGGAGGAGCTGCAGAAACTATGAGCTaGTGTTCCAAGGTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: SPKSQGHHQARMRTGGGAAETMS*CSKVGD
Trigger: ATCCCCGACCTTGGAACACCAGCTCATAGTTTCTGC...AGCTCCTCCTCCAGTCCTCATCCTGGCTTGATGATGACCTTGGCTTTTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CAA 72 bp AAAGTCAAATGCTTGGCTTGGAGACAGGGATTTATCTaGGGATCGCAGGCCCTTAGCACACGGCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: KVKCLAWRQGFI*GSQALSTRPGR
Trigger: TCTGCCAGGCCGTGTGCTAAGGGCCTGCGATCCCAAGATAAATCCCTGTCTCCAAGCCAAGCATTTGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp CTCCACGCTGGTGACAGGCTATGTGGCAGGAGGGTCTCTACCTTATCTCAGAATTACCTTATCTCAGAATaGAGGCATGGCTGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LHAGDRLCGRRVSTLSQNYLISE*RHGWGL
Trigger: CAGACCCCAGCCATGCCTTCATTCTGAGATAAGGTA...ATTCTGAGATAAGGTAGAGACCCTCCTGCCACATAGCCTGTCACCAGCGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469379.5
CDS-3UTR TCA 90 bp AACCCGCCCTCATCCTGTTCAGAGAGGGCACTTACAGGCCTCGGAGGCAGGGGAGGGAAGTGTTTCTGTTaGTGTGGTAAAGAGATAAAA +
Preference number: 4 (lower is better)
Translates to: NPPSSCSERALTGLGGRGGKCFC*CGKEIK
Trigger: TTTTATCTCTTTACCACATCAACAGAAACACTTCCC...TCCCCTGCCTCCGAGGCCTGTAAGTGCCCTCTCTGAACAGGATGAGGGCGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp TCACTTTCATTAGGAACCGGGACGAATAATCCAACTGAGCTGCCTCTGCACCAGGCCTGGCAGAAACTATaGGCTGGTGTTCCAAGGTCG +
Preference number: 4 (lower is better)
Translates to: SLSLGTGTNNPTELPLHQAWQKL*AGVPRS
Trigger: CGACCTTGGAACACCAGCTCATAGTTTCTGCCAGGC...CTGGTGCAGAGGCAGCTCAGTTGGATTATTCGTCCCGGTTCCTAATGAAAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp ACCAAGTGCCAAAGGGCCAAGGCTTGGTCTGTCTTGTTCACTGTGTTCAATCACCCTGCAGTTCTGAGCTaGAGAACTGATGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TKCQRAKAWSVLFTVFNHPAVLS*RTDELG
Trigger: CCCCAGCTCATCAGTTCTGCAGCTCAGAACTGCAGG...GTGATTGAACACAGTGAACAAGACAGACCAAGCCTTGGCCCTTTGGCACTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp CAATGGCTTTCCACTGCTCTTGGCTATGGCCTTCCAGGTCCTCCATGGTATGGCATGAGTGAGTGCATATaGAAAGGGCCTAGACACAGG +
Preference number: 4 (lower is better)
Translates to: QWLSTALGYGLPGPPWYGMSECI*KGPRHR
Trigger: CCTGTGTCTAGGCCCTTTGCATATGCACTCACTCAT...GCCATACCATGGAGGACCTGGAAGGCCATAGCCAAGAGCAGTGGAAAGCCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp GGCCTGGAGATGAGGCTCGGTCAGATCATCTTGAGGTCTTTCCTGGCGGCTTCCATTTCCTGGTGTTTCTaGTTAAACAGCGTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLEMRLGQIILRSFLAASISWCF*LNSVCC
Trigger: GCAGCAAACGCTGTTTAAGCAGAAACACCAGGAAAT...GGAAGCCGCCAGGAAAGACCTCAAGATGATCTGACCGAGCCTCATCTCCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp ACCAAGTGCCAAAGGGCCAAGGCTTGGTCTGTCTTGTTCACTGTGTTCAATCACCCCCACTGTGTGACATaGTCCACGCCCTTAGTCACT +
Preference number: 4 (lower is better)
Translates to: TKCQRAKAWSVLFTVFNHPHCVT*STPLVT
Trigger: AGTGACTAAGGGCGTGGAGCATGTCACACAGTGGGG...GTGATTGAACACAGTGAACAAGACAGACCAAGCCTTGGCCCTTTGGCACTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp CATCCAAGCCTCTGTCACCTCTGGCCTGGACAACTAACAGCATCTGAGGTGGTGCCCAAAAGCCGAGTATaGTTTCAGAAGTTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: HPSLCHLWPGQLTASEVVPKSRV*FQKFWE
Trigger: CTCCCAGAACTTCTGAAAGCATACTCGGCTTTTGGG...CACCACCTCAGATGCTGTTAGTTGTCCAGGCCAGAGGTGACAGAGGCTTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp TCACTTTCATTAGGAACCGGGACGAATAATCCAACTGAGCTGCCTCTGCACCAGTGTTCTCCAGCCACATaGGCCTCCTTTTGGTTGCGG +
Preference number: 4 (lower is better)
Translates to: SLSLGTGTNNPTELPLHQCSPAT*ASFWLR
Trigger: CCGCAACCAAAAGGAGGCCCATGTGGCTGGAGAACA...CTGGTGCAGAGGCAGCTCAGTTGGATTATTCGTCCCGGTTCCTAATGAAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp ACCAAGTGCCAAAGGGCCAAGGCTTGGTCTGTCTTGTTCACTGTGTTCAATCACGTGAACCCAGGGCCCTaGCTCTTAACCATGACCCTA +
Preference number: 4 (lower is better)
Translates to: TKCQRAKAWSVLFTVFNHVNPGP*LLTMTL
Trigger: TAGGGTCATGGTTAAGAGCCAGGGCCCTGGGTTCAC...GTGATTGAACACAGTGAACAAGACAGACCAAGCCTTGGCCCTTTGGCACTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CTTTATCCTTCTAGGACAAGCGAGAATCCCCCAAAAGCCAAGGTCATCATCAAGAGGTCACAGCTACCCTaGGATGTGAACCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LYPSRTSENPPKAKVIIKRSQLP*DVNPGP
Trigger: GGGCCCTGGGTTCACATCCCAGGGTAGCTGTGACCT...CTTGATGATGACCTTGGCTTTTGGGGGATTCTCGCTTGTCCTAGAAGGATAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp ATCTTCACTAAACTCCCCTCATCCAAGCCTCTGTCACCTCTGGCCTGGACAACTTTTGGGTTTCTGACCTaGGCAGCTCTATGTCCGGCA +
Preference number: 4 (lower is better)
Translates to: IFTKLPSSKPLSPLAWTTFGFLT*AALCPA
Trigger: TGCCGGACATAGAGCTGCCCAGGTCAGAAACCCAAA...AGTTGTCCAGGCCAGAGGTGACAGAGGCTTGGATGAGGGGAGTTTAGTGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CCTCTCTTCCTTGTGACTATGACCAAGTCTTACTCCTTCCTGGACCTTCATTTCATGGGGAGCCCTCACTaGAGGCACCCCTCAAACCCT +
Preference number: 4 (lower is better)
Translates to: PLFLVTMTKSYSFLDLHFMGSPH*RHPSNP
Trigger: AGGGTTTGAGGGGTGCCTCCAGTGAGGGCTCCCCAT...GAAATGAAGGTCCAGGAAGGAGTAAGACTTGGTCATAGTCACAAGGAAGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp TGGCTCTTAACCATGACCCTAATACTGCCTCCTCAAGTAGGTGCTCAGCAAATGACCATCTCAGTGCAATaGCCCTGTGGTGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: WLLTMTLILPPQVGAQQMTISVQ*PCGAFS
Trigger: GGAGAAGGCACCACAGGGTCATTGCACTGAGATGGT...CATTTGCTGAGCACCTACTTGAGGAGGCAGTATTAGGGTCATGGTTAAGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp GGACCACAGGGCAGCAAGAAAGTTCTCCTAAGGGTCCTGGGGCTGGGAAGGCAGGTTACTGAGCTCAACTaGAGCTTTTTCTTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: GPQGSKKVLLRVLGLGRQVTELN*SFFFKE
Trigger: TTCTTTGAAGAAAAAGCTTCAGTTGAGCTCAGTAAC...CTGCCTTCCCAGCCCCAGGACCCTTAGGAGAACTTTCTTGCTGCCCTGTGGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp GGCCTGGAGATGAGGCTCGGTCAGATCATCTTGAGGTCTTTCCTGGCGGCTTCCTCGCTAAGATGTTACTaGGCTCAACTGAAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: GLEMRLGQIILRSFLAASSLRCY*AQLKLF
Trigger: AAAAAGCTTCAGTTGAGCTCAGTAACATCTTAGCGA...GGAAGCCGCCAGGAAAGACCTCAAGATGATCTGACCGAGCCTCATCTCCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp GGCCAAAAGGAAGTACGGGCTTCTTTGCTTGCGATTTCTCCTCTCACAGCTTTGTGTCTCTTGCTTAGATaGCAGCCACAGCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GQKEVRASLLAISPLTALCLLLR*QPQLPG
Trigger: GCCAGGAAGCTGTGGCTGTCATCTAAGCAAGAGACA...CAAAGCTGTGAGAGGAGAAATCGCAAGCAAAGAAGCCCGTACTTCCTTTTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp CTAGGAAAACCACAGAGCCGGCTATCCAGGGTTCTGGTGCCCTGGGGACCACAGTATGAATATCCAAATTaGGAGAAGCCCTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: LGKPQSRLSRVLVPWGPQYEYPN*EKPSLS
Trigger: AGAAAGTGAGGGCTTCTCTCAATTTGGATATTCATA...CTGTGGTCCCCAGGGCACCAGAACCCTGGATAGCCGGCTCTGTGGTTTTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp TGGCTCTTAACCATGACCCTAATACTGCCTCCTCAAGTAGGTGCTCAGCAAATGGCATCCCCTCTTCATTaGCACTTAGACCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: WLLTMTLILPPQVGAQQMASPLH*HLDPVP
Trigger: GGGCACAGGGTCTAAGTGGCAATGAAGAGGGGATGC...CATTTGCTGAGCACCTACTTGAGGAGGCAGTATTAGGGTCATGGTTAAGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp AGAAATCTCACTGTGAACCCATTAGGAGAGCCCTCTGCCGCCAGCTATGCTGTCATAATCCAACTGAGCTaGCTCTGCACCAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: RNLTVNPLGEPSAASYAVIIQLS*LCTRTA
Trigger: AGCAGTTCTGGTGCAGAGGCAGCTCAGTTGGATTAT...GACAGCATAGCTGGCGGCAGAGGGCTCTCCTAATGGGTTCACAGTGAGATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CCTCTCTTCCTTGTGACTATGACCAAGTCTTACTCCTTCCTGGACCTTCATTTCGGTGTGTATCCGGCCTaGGAATTCCTCCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: PLFLVTMTKSYSFLDLHFGVYPA*EFLPLP
Trigger: AGGGAGAGGGAGGAATTCCCAGGCCGGATACACACC...GAAATGAAGGTCCAGGAAGGAGTAAGACTTGGTCATAGTCACAAGGAAGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp TCTCCTCAAACTTCATATGTTGAAACTCTGATCCCAAATGATGGTATTGCGGGGGAACGGACGGATGGATaGCAGGCAGGCAGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SPQTSYVETLIPNDGIAGERTDG*QAGRQA
Trigger: AGCCTGCCTGCCTGCCTGCCATCCATCCGTCCGTTC...CCCCGCAATACCATCATTTGGGATCAGAGTTTCAACATATGAAGTTTGAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CTAGGAAAACCACAGAGCCGGCTATCCAGGGTTCTGGTGCCCTGGGGACCACAGGTCATTTTTGCAAAATaGGAATGGGATTGTGTCATC +
Preference number: 4 (lower is better)
Translates to: LGKPQSRLSRVLVPWGPQVIFAK*EWDCVI
Trigger: GATGACACAATCCCATTCCCATTTTGCAAAAATGAC...CTGTGGTCCCCAGGGCACCAGAACCCTGGATAGCCGGCTCTGTGGTTTTCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp GTTTTCTCCTGTCTGAAGACGCAGCTGGCACCAATGTACCCTATGGCCAAGGACCCCATTCCCTGCTCCTaGGCAACAATTAACACTCTA +
Preference number: 4 (lower is better)
Translates to: VFSCLKTQLAPMYPMAKDPIPCS*ATINTL
Trigger: TAGAGTGTTAATTGTTGCCCAGGAGCAGGGAATGGG...GTCCTTGGCCATAGGGTACATTGGTGCCAGCTGCGTCTTCAGACAGGAGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CAA 72 bp AAACCCAAGGCCAAAAGGAAGTACGGGCTTCTTTGCTaGCGATTTCTCCTCTCACAGCTTTGGCCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: KPKAKRKYGLLC*RFLLSQLWPRA
Trigger: GGCTCTAGGCCAAAGCTGTGAGAGGAGAAATCGCAAGCAAAGAAGCCCGTACTTCCTTTTGGCCTTGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CAA 72 bp GTTGCGGAAAAACCAACTCTCTCTCACCTGAAGGTCTaGGCACCACTGATTCCCTCAGCCTGGACTGCTTTT +
Preference number: 4 (lower is better)
Translates to: VAEKPTLSHLKV*APLIPSAWTAF
Trigger: AAAAGCAGTCCAGGCTGAGGGAATCAGTGGTGCCAAGACCTTCAGGTGAGAGAGAGTTGGTTTTTCCGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp GTTTTCTCCTGTCTGAAGACGCAGCTGGCACCAATGTACCCTATGGCCAAGGACAGGGTCAAAGTCTGTTaGATGAGTGAGTGCATATGC +
Preference number: 4 (lower is better)
Translates to: VFSCLKTQLAPMYPMAKDRVKVC*MSECIC
Trigger: GCATATGCACTCACTCATTCAACAGACTTTGACCCT...GTCCTTGGCCATAGGGTACATTGGTGCCAGCTGCGTCTTCAGACAGGAGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp GTTTTCTCCTGTCTGAAGACGCAGCTGGCACCAATGTACCCTATGGCCAAGGACAAGTACGGGCTTCTTTaGTTGCGATTTCTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: VFSCLKTQLAPMYPMAKDKYGLL*LRFLLS
Trigger: TGAGAGGAGAAATCGCAAGCAAAGAAGCCCGTACTT...GTCCTTGGCCATAGGGTACATTGGTGCCAGCTGCGTCTTCAGACAGGAGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp CATTCTGTGCCTCCATTTATTTGTGAGACAGGGATAAAGAGGTCTGCCACTTTTCAAGGCGTTCCTGCCTaGCCTGTGACCCTCACCAGA +
Preference number: 4 (lower is better)
Translates to: HSVPPFICETGIKRSATFQGVPA*PVTLTR
Trigger: TCTGGTGAGGGTCACAGGGCAGGCAGGAACGCCTTG...AAAAGTGGCAGACCTCTTTATCCCTGTCTCACAAATAAATGGAGGCACAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp GGACCACAGGGCAGCAAGAAAGTTCTCCTAAGGGTCCTGGGGCTGGGAAGGCAGTTAAACAGCGTTTGCTaGAAAATATGTCGAAGCATT +
Preference number: 4 (lower is better)
Translates to: GPQGSKKVLLRVLGLGRQLNSVC*KICRSI
Trigger: AATGCTTCGACATATTTTGCAGCAAACGCTGTTTAA...CTGCCTTCCCAGCCCCAGGACCCTTAGGAGAACTTTCTTGCTGCCCTGTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp TCTCCTCAAACTTCATATGTTGAAACTCTGATCCCAAATGATGGTATTGCGGGGCTACCGGCGTTCCCCTaGTTATGGAAAGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SPQTSYVETLIPNDGIAGLPAFP*LWKGAW
Trigger: CCAGGCCCCTTTCCATAAGCAGGGGAACGCCGGTAG...CCCCGCAATACCATCATTTGGGATCAGAGTTTCAACATATGAAGTTTGAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp CCTCTCTTCCTTGTGACTATGACCAAGTCTTACTCCTTCCTGGACCTTCATTTCGCCTGGGGGTATACTTaGCTCCCTGTGTCACCATTG +
Preference number: 4 (lower is better)
Translates to: PLFLVTMTKSYSFLDLHFAWGYT*LPVSPL
Trigger: CAATGGTGACACAGGGAGGCAAGTATACCCCCAGGC...GAAATGAAGGTCCAGGAAGGAGTAAGACTTGGTCATAGTCACAAGGAAGAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp GGCCAAAAGGAAGTACGGGCTTCTTTGCTTGCGATTTCTCCTCTCACAGCTTTGCAAAGGGCCAAGGCTTaGTCTGTCTTGTTCACTGTG +
Preference number: 4 (lower is better)
Translates to: GQKEVRASLLAISPLTALQRAKA*SVLFTV
Trigger: CACAGTGAACAAGACAGACCAAGCCTTGGCCCTTTG...CAAAGCTGTGAGAGGAGAAATCGCAAGCAAAGAAGCCCGTACTTCCTTTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CTTTATCCTTCTAGGACAAGCGAGAATCCCCCAAAAGCCAAGGTCATCATCAAGCTCACTGACCTTTCCTaGGGCTGTTCTCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: LYPSRTSENPPKAKVIIKLTDLS*GCSPAT
Trigger: TGTGGCTGGAGAACAGCCCCAGGAAAGGTCAGTGAG...CTTGATGATGACCTTGGCTTTTGGGGGATTCTCGCTTGTCCTAGAAGGATAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CTAGACACAGGAGTGCGATACAATCAATGCTCAGTACAGATTTTGAATGGATTCAAACCCTCAGTGCTGTaGCCAGGGAACCGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LDTGVRYNQCSVQILNGFKPSVL*PGNRAG
Trigger: GCCAGCCCGGTTCCCTGGCCACAGCACTGAGGGTTT...GAATCCATTCAAAATCTGTACTGAGCATTGATTGTATCGCACTCCTGTGTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp GGCCAAAAGGAAGTACGGGCTTCTTTGCTTGCGATTTCTCCTCTCACAGCTTTGCACCAGGCACTGTACTaGACCAACAAGCATTCATTC +
Preference number: 4 (lower is better)
Translates to: GQKEVRASLLAISPLTALHQALY*TNKHSF
Trigger: GAATGAATGCTTGTTGGTTCAGTACAGTGCCTGGTG...CAAAGCTGTGAGAGGAGAAATCGCAAGCAAAGAAGCCCGTACTTCCTTTTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp TCCCCCAAAAGCCAAGGTCATCATCAAGCCAGGATGAGGACTGGAGGAGGAGCTGCTCAGTACAGATTTTaGATGGATTCCATAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SPKSQGHHQARMRTGGGAAQYRF*MDSIGS
Trigger: AGAACCTATGGAATCCATTCAAAATCTGTACTGAGC...AGCTCCTCCTCCAGTCCTCATCCTGGCTTGATGATGACCTTGGCTTTTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp TGGCTCTTAACCATGACCCTAATACTGCCTCCTCAAGTAGGTGCTCAGCAAATGTACAAAGGTGATTCGTaGCTGGCTCCCTGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: WLLTMTLILPPQVGAQQMYKGDS*LAPCVF
Trigger: GAAGACACAGGGAGCCAGGCACGAATCACCTTTGTA...CATTTGCTGAGCACCTACTTGAGGAGGCAGTATTAGGGTCATGGTTAAGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp CATTCTGTGCCTCCATTTATTTGTGAGACAGGGATAAAGAGGTCTGCCACTTTTGGGCTGGATGCTGGATaGAAAGCTCCCTCGTCACAG +
Preference number: 4 (lower is better)
Translates to: HSVPPFICETGIKRSATFGLDAG*KAPSSQ
Trigger: CTGTGACGAGGGAGCTTTGCATCCAGCATCCAGCCC...AAAAGTGGCAGACCTCTTTATCCCTGTCTCACAAATAAATGGAGGCACAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp TATGCAAAGGGCCTAGACACAGGAGTGCGATACAATCAATGCTCAGTACAGATTGTCTTCCTCACCAAGTaGCAAAGGGCCAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: YAKGLDTGVRYNQCSVQIVFLTK*QRAKAW
Trigger: CCAAGCCTTGGCCCTTTGGCACTTGGTGAGGAAGAC...AATCTGTACTGAGCATTGATTGTATCGCACTCCTGTGTCTAGGCCCTTTGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp TGGCTCTTAACCATGACCCTAATACTGCCTCCTCAAGTAGGTGCTCAGCAAATGGGGCCTCCTTTTGGTTaGGGAAAAACCAACTCTCTC +
Preference number: 4 (lower is better)
Translates to: WLLTMTLILPPQVGAQQMGPPFG*GKTNSL
Trigger: GAGAGAGTTGGTTTTTCCGCAACCAAAAGGAGGCCC...CATTTGCTGAGCACCTACTTGAGGAGGCAGTATTAGGGTCATGGTTAAGAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp TCTCCTCAAACTTCATATGTTGAAACTCTGATCCCAAATGATGGTATTGCGGGGCTTCCAGGTCCTCCATaGTATGGCTCCCACCCACCT +
Preference number: 4 (lower is better)
Translates to: SPQTSYVETLIPNDGIAGLPGPP*YGSHPP
Trigger: AGGTGGGTGGGAGCCATACCATGGAGGACCTGGAAG...CCCCGCAATACCATCATTTGGGATCAGAGTTTCAACATATGAAGTTTGAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp ACCAAGTGCCAAAGGGCCAAGGCTTGGTCTGTCTTGTTCACTGTGTTCAATCACTTAGTCACTGTTTCCTaGATTGGCGTGTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: TKCQRAKAWSVLFTVFNHLVTVS*IGVWGT
Trigger: TGTTCCCCACACGCCAATCCAGGAAACAGTGACTAA...GTGATTGAACACAGTGAACAAGACAGACCAAGCCTTGGCCCTTTGGCACTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CCTCTCTTCCTTGTGACTATGACCAAGTCTTACTCCTTCCTGGACCTTCATTTCCACATGAGCTGTAAGTaGGGCAGACCCTGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: PLFLVTMTKSYSFLDLHFHMSCK*GRPCLF
Trigger: AAACAGGCAGGGTCTGCCCCACTTACAGCTCATGTG...GAAATGAAGGTCCAGGAAGGAGTAAGACTTGGTCATAGTCACAAGGAAGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CAA 72 bp CACCAAGTTACACTGCTTCAAAGTCAAATGCTTGGCTaGGAGACAGGGATTTATCTTGGGATCGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: HQVTLLQSQMLG*ETGIYLGIAGP
Trigger: AGGGCCTGCGATCCCAAGATAAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGAAGCAGTGTAACTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp TCTCCTCAAACTTCATATGTTGAAACTCTGATCCCAAATGATGGTATTGCGGGGTGCACCAGGACAAGCTaGCTCTGGTGGCAACGTTCT +
Preference number: 4 (lower is better)
Translates to: SPQTSYVETLIPNDGIAGCTRTS*LWWQRS
Trigger: AGAACGTTGCCACCAGAGTCAGCTTGTCCTGGTGCA...CCCCGCAATACCATCATTTGGGATCAGAGTTTCAACATATGAAGTTTGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp TTGGCAAAGCCAGGTAATGCAGGAGAGGGGTGGACTCAGCCTGCTTGCGGTGAAGTGCGATACAATCAATaGTCAGTACAGATTTTGAAT +
Preference number: 4 (lower is better)
Translates to: LAKPGNAGEGWTQPACGEVRYNQ*SVQILN
Trigger: ATTCAAAATCTGTACTGAGCATTGATTGTATCGCAC...TTCACCGCAAGCAGGCTGAGTCCACCCCTCTCCTGCATTACCTGGCTTTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp TCACTTTCATTAGGAACCGGGACGAATAATCCAACTGAGCTGCCTCTGCACCAGTGCTTCAAAGTCAAATaGTTGGCTTGGAGACAGGGA +
Preference number: 4 (lower is better)
Translates to: SLSLGTGTNNPTELPLHQCFKVK*LAWRQG
Trigger: TCCCTGTCTCCAAGCCAAGCATTTGACTTTGAAGCA...CTGGTGCAGAGGCAGCTCAGTTGGATTATTCGTCCCGGTTCCTAATGAAAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CTTATAAGAACAGTAAGAGATAAATGTTTAAGTCCCCCAGCCTATGGTGTTCTGGACCCTCACCAGACCTaGCAGCTGCCTGACAGCTTG +
Preference number: 4 (lower is better)
Translates to: LIRTVRDKCLSPPAYGVLDPHQT*QLPDSL
Trigger: CAAGCTGTCAGGCAGCTGCCAGGTCTGGTGAGGGTC...CAGAACACCATAGGCTGGGGGACTTAAACATTTATCTCTTACTGTTCTTATAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp TGGCTCTTAACCATGACCCTAATACTGCCTCCTCAAGTAGGTGCTCAGCAAATGAAGGCAGAGCCTTCATaGGTGGGATTAATGCCCTTA +
Preference number: 4 (lower is better)
Translates to: WLLTMTLILPPQVGAQQMKAEPS*VGLMPL
Trigger: TAAGGGCATTAATCCCACCCATGAAGGCTCTGCCTT...CATTTGCTGAGCACCTACTTGAGGAGGCAGTATTAGGGTCATGGTTAAGAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp GTTTTCTCCTGTCTGAAGACGCAGCTGGCACCAATGTACCCTATGGCCAAGGACTCAAAGTCAAATGCTTaGCTTGGAGACAGGGATTTA +
Preference number: 4 (lower is better)
Translates to: VFSCLKTQLAPMYPMAKDSKSNA*LGDRDL
Trigger: TAAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGA...GTCCTTGGCCATAGGGTACATTGGTGCCAGCTGCGTCTTCAGACAGGAGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CTTATAAGAACAGTAAGAGATAAATGTTTAAGTCCCCCAGCCTATGGTGTTCTGTGCAGCCCTTTCTCCTaGGAAGGAGGGAGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: LIRTVRDKCLSPPAYGVLCSPFS*EGGSSR
Trigger: TCGGGAGCTCCCTCCTTCCCAGGAGAAAGGGCTGCA...CAGAACACCATAGGCTGGGGGACTTAAACATTTATCTCTTACTGTTCTTATAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp TCTCCTCAAACTTCATATGTTGAAACTCTGATCCCAAATGATGGTATTGCGGGGTCCCTGTGGAAGGTTTaGGTTTCTGACCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SPQTSYVETLIPNDGIAGSLWKV*VSDLGS
Trigger: GCTGCCCAGGTCAGAAACCCAAACCTTCCACAGGGA...CCCCGCAATACCATCATTTGGGATCAGAGTTTCAACATATGAAGTTTGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp TCTCCTCAAACTTCATATGTTGAAACTCTGATCCCAAATGATGGTATTGCGGGGGCTGGCAGTCTTAGTTaGCTTTGTTCCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: SPQTSYVETLIPNDGIAGAGSLS*LCSLGL
Trigger: GAGGCCGAGGGAACAAAGCCAACTAAGACTGCCAGC...CCCCGCAATACCATCATTTGGGATCAGAGTTTCAACATATGAAGTTTGAGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp TCTCCTCAAACTTCATATGTTGAAACTCTGATCCCAAATGATGGTATTGCGGGGTGCCTGCCTGTTCTGTaGAGGGAGCCTACAAAACTG +
Preference number: 4 (lower is better)
Translates to: SPQTSYVETLIPNDGIAGCLPVL*REPTKL
Trigger: CAGTTTTGTAGGCTCCCTTCACAGAACAGGCAGGCA...CCCCGCAATACCATCATTTGGGATCAGAGTTTCAACATATGAAGTTTGAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp CATTCTGTGCCTCCATTTATTTGTGAGACAGGGATAAAGAGGTCTGCCACTTTTGAAGGTTTGGGTTTCTaGCCTGGGCAGCTCTATGTC +
Preference number: 4 (lower is better)
Translates to: HSVPPFICETGIKRSATFEGLGF*PGQLYV
Trigger: GACATAGAGCTGCCCAGGTCAGAAACCCAAACCTTC...AAAAGTGGCAGACCTCTTTATCCCTGTCTCACAAATAAATGGAGGCACAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp CATTCTGTGCCTCCATTTATTTGTGAGACAGGGATAAAGAGGTCTGCCACTTTTAAAACTGGCAGCCCCTaGAGTTCTGAGCTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: HSVPPFICETGIKRSATFKTGSP*SSELQN
Trigger: GTTCTGCAGCTCAGAACTGCAGGGGCTGCCAGTTTT...AAAAGTGGCAGACCTCTTTATCCCTGTCTCACAAATAAATGGAGGCACAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp GGCCAAAAGGAAGTACGGGCTTCTTTGCTTGCGATTTCTCCTCTCACAGCTTTGGCAGGTTTGTACATTTaGAAGGGCATGGGTATAACA +
Preference number: 4 (lower is better)
Translates to: GQKEVRASLLAISPLTALAGLYI*KGMGIT
Trigger: TGTTATACCCATGCCCTTGCAAATGTACAAACCTGC...CAAAGCTGTGAGAGGAGAAATCGCAAGCAAAGAAGCCCGTACTTCCTTTTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp ATCTTCACTAAACTCCCCTCATCCAAGCCTCTGTCACCTCTGGCCTGGACAACTCAGCCTGTCCTCTTCTaGTCACAGGATATAAATATT +
Preference number: 4 (lower is better)
Translates to: IFTKLPSSKPLSPLAWTTQPVLF*SQDINI
Trigger: AATATTTATATCCTGTGAGCAGAAGAGGACAGGCTG...AGTTGTCCAGGCCAGAGGTGACAGAGGCTTGGATGAGGGGAGTTTAGTGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp CTAGACACAGGAGTGCGATACAATCAATGCTCAGTACAGATTTTGAATGGATTCCCTCTGCACCAGAACTaGTGGGACGTGAAGACTCTC +
Preference number: 4 (lower is better)
Translates to: LDTGVRYNQCSVQILNGFPLHQN*WDVKTL
Trigger: GAGAGTCTTCACGTCCCAGCAGTTCTGGTGCAGAGG...GAATCCATTCAAAATCTGTACTGAGCATTGATTGTATCGCACTCCTGTGTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp TCTCCTCAAACTTCATATGTTGAAACTCTGATCCCAAATGATGGTATTGCGGGGGAGTCTGGCCATTCCTaGCATCCAGTTAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: SPQTSYVETLIPNDGIAGESGHS*HPVRPG
Trigger: TCCAGGTCTAACTGGATGCCAGGAATGGCCAGACTC...CCCCGCAATACCATCATTTGGGATCAGAGTTTCAACATATGAAGTTTGAGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp CTTTATCCTTCTAGGACAAGCGAGAATCCCCCAAAAGCCAAGGTCATCATCAAGCACAGTTTTAAGTGTTaGGGACATGGCAGTGAACAC +
Preference number: 4 (lower is better)
Translates to: LYPSRTSENPPKAKVIIKHSFKC*GHGSEH
Trigger: GTGTTCACTGCCATGTCCTCAACACTTAAAACTGTG...CTTGATGATGACCTTGGCTTTTGGGGGATTCTCGCTTGTCCTAGAAGGATAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CTTTATCCTTCTAGGACAAGCGAGAATCCCCCAAAAGCCAAGGTCATCATCAAGTGCCTCAAATGGATTTaGGAGCGAAGGCTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LYPSRTSENPPKAKVIIKCLKWI*ERRLFP
Trigger: TGGAAAAAGCCTTCGCTCCCAAATCCATTTGAGGCA...CTTGATGATGACCTTGGCTTTTGGGGGATTCTCGCTTGTCCTAGAAGGATAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CAA 72 bp TTCCTCACCAAGTTACACTGCTTCAAAGTCAAATGCTaGGCTTGGAGACAGGGATTTATCTTGGGATCGCAG +
Preference number: 4 (lower is better)
Translates to: FLTKLHCFKVKC*AWRQGFILGSQ
Trigger: CTGCGATCCCAAGATAAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGAAGCAGTGTAACTTGGTGAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp TCTCCTCAAACTTCATATGTTGAAACTCTGATCCCAAATGATGGTATTGCGGGGTCTGTTATAGCAGACTaGACTAAGACACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SPQTSYVETLIPNDGIAGSVIAD*TKTPSA
Trigger: GGCAGAGGGTGTCTTAGTTCAGTCTGCTATAACAGA...CCCCGCAATACCATCATTTGGGATCAGAGTTTCAACATATGAAGTTTGAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp TATGCAAAGGGCCTAGACACAGGAGTGCGATACAATCAATGCTCAGTACAGATTCCCTGTACCACCATCTaGAACAGACTCAATGTTTGT +
Preference number: 4 (lower is better)
Translates to: YAKGLDTGVRYNQCSVQIPCTTI*NRLNVC
Trigger: ACAAACATTGAGTCTGTTGCAGATGGTGGTACAGGG...AATCTGTACTGAGCATTGATTGTATCGCACTCCTGTGTCTAGGCCCTTTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp GCGTTTGCTGCAAAATATGTCGAAGCATTTGGGATTCAGTTTTTAGTTCAGAATATTAGGAGAGCCCTCTaGCGCCAGCTATGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: AFAAKYVEAFGIQFLVQNIRRAL*RQLCCQ
Trigger: CTGACAGCATAGCTGGCGGCAGAGGGCTCTCCTAAT...ATTCTGAACTAAAAACTGAATCCCAAATGCTTCGACATATTTTGCAGCAAACGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp AAGTTACACTGCTTCAAAGTCAAATGCTTGGCTTGGAGACAGGGATTTATCTTGTCCCTCAGCCTGGACTaGTTTTCTCCAGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: KLHCFKVKCLAWRQGFILSLSLD*FSPDPS
Trigger: AGAAGGATCTGGAGAAAAGCAGTCCAGGCTGAGGGA...CAAGATAAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGAAGCAGTGTAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp AAGTTACACTGCTTCAAAGTCAAATGCTTGGCTTGGAGACAGGGATTTATCTTGCACTGTTTCCTGGATTaGCGTGTGGGGAACACATGT +
Preference number: 4 (lower is better)
Translates to: KLHCFKVKCLAWRQGFILHCFLD*RVGNTC
Trigger: ACATGTGTTCCCCACACGCCAATCCAGGAAACAGTG...CAAGATAAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGAAGCAGTGTAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp GCGTTTGCTGCAAAATATGTCGAAGCATTTGGGATTCAGTTTTTAGTTCAGAATCTGCACCAGAACTGCTaGGACGTGAAGACTCTCCCT +
Preference number: 4 (lower is better)
Translates to: AFAAKYVEAFGIQFLVQNLHQNC*DVKTLP
Trigger: AGGGAGAGTCTTCACGTCCCAGCAGTTCTGGTGCAG...ATTCTGAACTAAAAACTGAATCCCAAATGCTTCGACATATTTTGCAGCAAACGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp TCTCCTCAAACTTCATATGTTGAAACTCTGATCCCAAATGATGGTATTGCGGGGGCCTCCATTTATTTGTaGGACAGGGATAAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: SPQTSYVETLIPNDGIAGASIYL*DRDKEV
Trigger: GACCTCTTTATCCCTGTCTCACAAATAAATGGAGGC...CCCCGCAATACCATCATTTGGGATCAGAGTTTCAACATATGAAGTTTGAGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp GGCCAAAAGGAAGTACGGGCTTCTTTGCTTGCGATTTCTCCTCTCACAGCTTTGGGATATAAATATTCATaGATGAGTATAGGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GQKEVRASLLAISPLTALGYKYS*MSIGAG
Trigger: ACCTGCACCTATACTCATGCATGAATATTTATATCC...CAAAGCTGTGAGAGGAGAAATCGCAAGCAAAGAAGCCCGTACTTCCTTTTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp TATGCAAAGGGCCTAGACACAGGAGTGCGATACAATCAATGCTCAGTACAGATTTTTGCAAAATGGGAATaGGATTGTGTCATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: YAKGLDTGVRYNQCSVQIFAKWE*DCVISC
Trigger: GCAGGAGATGACACAATCCCATTCCCATTTTGCAAA...AATCTGTACTGAGCATTGATTGTATCGCACTCCTGTGTCTAGGCCCTTTGCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CAA 72 bp AATTGCCAGAGTCATTTTTGCAAAATGGGAATGGGATaGTGTCATCTCCTGCCTAGAACCTTCCAATGGCTT +
Preference number: 4 (lower is better)
Translates to: NCQSHFCKMGMG*CHLLPRTFQWL
Trigger: AAGCCATTGGAAGGTTCTAGGCAGGAGATGACACAATCCCATTCCCATTTTGCAAAAATGACTCTGGCAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp TATGCAAAGGGCCTAGACACAGGAGTGCGATACAATCAATGCTCAGTACAGATTTCAAAGTCTGTTGAATaGGTGAGTGCATATGCAAAG +
Preference number: 4 (lower is better)
Translates to: YAKGLDTGVRYNQCSVQISKSVE*VSAYAK
Trigger: CTTTGCATATGCACTCACTCATTCAACAGACTTTGA...AATCTGTACTGAGCATTGATTGTATCGCACTCCTGTGTCTAGGCCCTTTGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CCA 90 bp CATTCTGTGCCTCCATTTATTTGTGAGACAGGGATAAAGAGGTCTGCCACTTTTGTCAAATGCTTGGCTTaGAGACAGGGATTTATCTTG +
Preference number: 4 (lower is better)
Translates to: HSVPPFICETGIKRSATFVKCLA*RQGFIL
Trigger: CAAGATAAATCCCTGTCTCCAAGCCAAGCATTTGAC...AAAAGTGGCAGACCTCTTTATCCCTGTCTCACAAATAAATGGAGGCACAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR TCA 90 bp TATGCAAAGGGCCTAGACACAGGAGTGCGATACAATCAATGCTCAGTACAGATTCATATGTTGAAACTCTaGTCCCAAATGATGGTATTG +
Preference number: 4 (lower is better)
Translates to: YAKGLDTGVRYNQCSVQIHMLKL*SQMMVL
Trigger: CAATACCATCATTTGGGATCAGAGTTTCAACATATG...AATCTGTACTGAGCATTGATTGTATCGCACTCCTGTGTCTAGGCCCTTTGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp TCTCCTCAAACTTCATATGTTGAAACTCTGATCCCAAATGATGGTATTGCGGGGAGGGATAAAGAGGTCTaGCACTTTTATTGTGATCTT +
Preference number: 4 (lower is better)
Translates to: SPQTSYVETLIPNDGIAGRDKEV*HFYCDL
Trigger: AAGATCACAATAAAAGTGGCAGACCTCTTTATCCCT...CCCCGCAATACCATCATTTGGGATCAGAGTTTCAACATATGAAGTTTGAGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
3UTR CAA 72 bp GAGAGATATTTCCTGGTGTTTCTGCTTAAACAGCGTTaGCTGCAAAATATGTCGAAGCATTTGGGATTCAGT +
Preference number: 4 (lower is better)
Translates to: ERYFLVFLLKQR*LQNMSKHLGFS
Trigger: ACTGAATCCCAAATGCTTCGACATATTTTGCAGCAAACGCTGTTTAAGCAGAAACACCAGGAAATATCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp CTAGACACAGGAGTGCGATACAATCAATGCTCAGTACAGATTTTGAATGGATTCCATTCTGTCCACAATTaGCAGAGTCATTTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: LDTGVRYNQCSVQILNGFHSVHN*QSHFCK
Trigger: TTTGCAAAAATGACTCTGGCAATTGTGGACAGAATG...GAATCCATTCAAAATCTGTACTGAGCATTGATTGTATCGCACTCCTGTGTCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR GCA 90 bp AAGTTACACTGCTTCAAAGTCAAATGCTTGGCTTGGAGACAGGGATTTATCTTGATGCATGAGTATAGGTaGAGGTTTGTACATTTGCAA +
Preference number: 4 (lower is better)
Translates to: KLHCFKVKCLAWRQGFILMHEYR*RFVHLQ
Trigger: TTGCAAATGTACAAACCTGCACCTATACTCATGCAT...CAAGATAAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGAAGCAGTGTAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp AACCCGCCCTCATCCTGTTCAGAGAGGGCACTTACAGGCCTCGGAGGCAGGGGAATTCCTCCCTCTCCCTaGCTAGCGCCCCAACCCGCC +
Preference number: 5 (lower is better)
Translates to: NPPSSCSERALTGLGGRGIPPSP*LAPQPA
Trigger: GGCGGGTTGGGGCGCTAGCAAGGGAGAGGGAGGAAT...TCCCCTGCCTCCGAGGCCTGTAAGTGCCCTCTCTGAACAGGATGAGGGCGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp CTAGGAAAACCACAGAGCCGGCTATCCAGGGTTCTGGTGCCCTGGGGACCACAGGTGCACCTGTTCATCTaGAGATTCATCCTGGGCCCC +
Preference number: 5 (lower is better)
Translates to: LGKPQSRLSRVLVPWGPQVHLFI*RFILGP
Trigger: GGGGCCCAGGATGAATCTCAAGATGAACAGGTGCAC...CTGTGGTCCCCAGGGCACCAGAACCCTGGATAGCCGGCTCTGTGGTTTTCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp CATCTTGAGGTCTTTCCTGGCGGCTTCCCTGCTGCTAGCTACCCCTCTCATACCCTCCTTGGCTTGGATTaGAGGGTGGGGAGGAGGGAA +
Preference number: 5 (lower is better)
Translates to: HLEVFPGGFPAASYPSHTLLGLD*RVGRRE
Trigger: TTCCCTCCTCCCCACCCTCAAATCCAAGCCAAGGAG...GGTATGAGAGGGGTAGCTAGCAGCAGGGAAGCCGCCAGGAAAGACCTCAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp GGCCTGGAGATGAGGCTCGGTCAGATCATCTTGAGGTCTTTCCTGGCGGCTTCCCTGCCTGTGGTTGTCTaGGCAAAGCCAGGTAATGCA +
Preference number: 5 (lower is better)
Translates to: GLEMRLGQIILRSFLAASLPVVV*AKPGNA
Trigger: TGCATTACCTGGCTTTGCCAAGACAACCACAGGCAG...GGAAGCCGCCAGGAAAGACCTCAAGATGATCTGACCGAGCCTCATCTCCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp CAATGGCTTTCCACTGCTCTTGGCTATGGCCTTCCAGGTCCTCCATGGTATGGCCTCGGTCAGATCATCTaGAGGTCTTTCCTGGCGGCT +
Preference number: 5 (lower is better)
Translates to: QWLSTALGYGLPGPPWYGLGQII*RSFLAA
Trigger: AGCCGCCAGGAAAGACCTCAAGATGATCTGACCGAG...GCCATACCATGGAGGACCTGGAAGGCCATAGCCAAGAGCAGTGGAAAGCCATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp TTCCTCGGCACTTGGGGGCAAGGCCTCCTTGGCTTGGATTTGAGGGTGGGGAGGCTGCTTAAACAGCGTTaGCTGCAAAATATGTCGAAG +
Preference number: 5 (lower is better)
Translates to: FLGTWGQGLLGLDLRVGRLLKQR*LQNMSK
Trigger: CTTCGACATATTTTGCAGCAAACGCTGTTTAAGCAG...CCTCCCCACCCTCAAATCCAAGCCAAGGAGGCCTTGCCCCCAAGTGCCGAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp CATCCAAGCCTCTGTCACCTCTGGCCTGGACAACTAACAGCATCTGAGGTGGTGGAAGTACGGGCTTCTTaGCTTGCGATTTCTCCTCTC +
Preference number: 5 (lower is better)
Translates to: HPSLCHLWPGQLTASEVVEVRAS*LAISPL
Trigger: GAGAGGAGAAATCGCAAGCAAAGAAGCCCGTACTTC...CACCACCTCAGATGCTGTTAGTTGTCCAGGCCAGAGGTGACAGAGGCTTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp CAATGGCTTTCCACTGCTCTTGGCTATGGCCTTCCAGGTCCTCCATGGTATGGCAAGCTCATGTCCTTCTaGCCTGCCTTCATAGTTCCG +
Preference number: 5 (lower is better)
Translates to: QWLSTALGYGLPGPPWYGKLMSF*PAFIVP
Trigger: CGGAACTATGAAGGCAGGCAAGAAGGACATGAGCTT...GCCATACCATGGAGGACCTGGAAGGCCATAGCCAAGAGCAGTGGAAAGCCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp TGGCTCTTAACCATGACCCTAATACTGCCTCCTCAAGTAGGTGCTCAGCAAATGCAGCTGCCTGACAGCTaGTCTGGCTCACGTGTTCTC +
Preference number: 5 (lower is better)
Translates to: WLLTMTLILPPQVGAQQMQLPDS*SGSRVL
Trigger: GAGAACACGTGAGCCAGACAAGCTGTCAGGCAGCTG...CATTTGCTGAGCACCTACTTGAGGAGGCAGTATTAGGGTCATGGTTAAGAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp AGAAATCTCACTGTGAACCCATTAGGAGAGCCCTCTGCCGCCAGCTATGCTGTCTTCCTAAAGGAGCCCTaGCCCACCATATCTCAGCAT +
Preference number: 5 (lower is better)
Translates to: RNLTVNPLGEPSAASYAVFLKEP*PTISQH
Trigger: ATGCTGAGATATGGTGGGCAAGGGCTCCTTTAGGAA...GACAGCATAGCTGGCGGCAGAGGGCTCTCCTAATGGGTTCACAGTGAGATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp GGAACCGGGCTGGCAGTCTTAGTTGGCTTTGTTCCCTCGGCCTCCACTTCCCCAGCTGAAATCTCCAGTTaGTATAATTCAGGGCTAAGA +
Preference number: 5 (lower is better)
Translates to: GTGLAVLVGFVPSASTSPAEISS*YNSGLR
Trigger: TCTTAGCCCTGAATTATACAAACTGGAGATTTCAGC...TGGGGAAGTGGAGGCCGAGGGAACAAAGCCAACTAAGACTGCCAGCCCGGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp ATCTTCACTAAACTCCCCTCATCCAAGCCTCTGTCACCTCTGGCCTGGACAACTCTGCCTCAAATGGATTaGGGAGCGAAGGCTTTTTCC +
Preference number: 5 (lower is better)
Translates to: IFTKLPSSKPLSPLAWTTLPQMD*GAKAFS
Trigger: GGAAAAAGCCTTCGCTCCCAAATCCATTTGAGGCAG...AGTTGTCCAGGCCAGAGGTGACAGAGGCTTGGATGAGGGGAGTTTAGTGAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp CTTTATCCTTCTAGGACAAGCGAGAATCCCCCAAAAGCCAAGGTCATCATCAAGGGCTTTCCACTGCTCTaGGCTATGGCCTTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: LYPSRTSENPPKAKVIIKGFPLL*AMAFQV
Trigger: GACCTGGAAGGCCATAGCCAAGAGCAGTGGAAAGCC...CTTGATGATGACCTTGGCTTTTGGGGGATTCTCGCTTGTCCTAGAAGGATAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp CAATGGCTTTCCACTGCTCTTGGCTATGGCCTTCCAGGTCCTCCATGGTATGGCTGCAGGTTTGTACATTaGCAAGGGCATGGGTATAAC +
Preference number: 5 (lower is better)
Translates to: QWLSTALGYGLPGPPWYGCRFVH*QGHGYN
Trigger: GTTATACCCATGCCCTTGCAAATGTACAAACCTGCA...GCCATACCATGGAGGACCTGGAAGGCCATAGCCAAGAGCAGTGGAAAGCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp AGAAATCTCACTGTGAACCCATTAGGAGAGCCCTCTGCCGCCAGCTATGCTGTCAAAATGGGAATGGGATaGTGTCATCTCCTGCCTAGA +
Preference number: 5 (lower is better)
Translates to: RNLTVNPLGEPSAASYAVKMGMG*CHLLPR
Trigger: TCTAGGCAGGAGATGACACAATCCCATTCCCATTTT...GACAGCATAGCTGGCGGCAGAGGGCTCTCCTAATGGGTTCACAGTGAGATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp GGCCTGGAGATGAGGCTCGGTCAGATCATCTTGAGGTCTTTCCTGGCGGCTTCCATAACACGCTTTCCATaGTATCCGACTATGAATATG +
Preference number: 5 (lower is better)
Translates to: GLEMRLGQIILRSFLAASITRFP*YPTMNM
Trigger: CATATTCATAGTCGGATACAATGGAAAGCGTGTTAT...GGAAGCCGCCAGGAAAGACCTCAAGATGATCTGACCGAGCCTCATCTCCAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp AGAAATCTCACTGTGAACCCATTAGGAGAGCCCTCTGCCGCCAGCTATGCTGTCAGTATAGGTGCAGGTTaGTACATTTGCAAGGGCATG +
Preference number: 5 (lower is better)
Translates to: RNLTVNPLGEPSAASYAVSIGAG*YICKGM
Trigger: CATGCCCTTGCAAATGTACAAACCTGCACCTATACT...GACAGCATAGCTGGCGGCAGAGGGCTCTCCTAATGGGTTCACAGTGAGATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp CTTTATCCTTCTAGGACAAGCGAGAATCCCCCAAAAGCCAAGGTCATCATCAAGTCTCACCTGAAGGTCTaGGCACCACTGATTCCCTCA +
Preference number: 5 (lower is better)
Translates to: LYPSRTSENPPKAKVIIKSHLKV*APLIPS
Trigger: TGAGGGAATCAGTGGTGCCAAGACCTTCAGGTGAGA...CTTGATGATGACCTTGGCTTTTGGGGGATTCTCGCTTGTCCTAGAAGGATAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp GCGTTTGCTGCAAAATATGTCGAAGCATTTGGGATTCAGTTTTTAGTTCAGAATGAGCTTCCTCGGCACTaGGGGGCAAGGCCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: AFAAKYVEAFGIQFLVQNELPRH*GARPPW
Trigger: CCAAGGAGGCCTTGCCCCCAAGTGCCGAGGAAGCTC...ATTCTGAACTAAAAACTGAATCCCAAATGCTTCGACATATTTTGCAGCAAACGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp CTTTATCCTTCTAGGACAAGCGAGAATCCCCCAAAAGCCAAGGTCATCATCAAGTCACTGTTTCCTGGATaGGCGTGTGGGGAACACATG +
Preference number: 5 (lower is better)
Translates to: LYPSRTSENPPKAKVIIKSLFPG*ACGEHM
Trigger: CATGTGTTCCCCACACGCCAATCCAGGAAACAGTGA...CTTGATGATGACCTTGGCTTTTGGGGGATTCTCGCTTGTCCTAGAAGGATAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp ACCAAGTGCCAAAGGGCCAAGGCTTGGTCTGTCTTGTTCACTGTGTTCAATCACCTCCCTGTGTCACCATaGTCTGTCTCTTGCTTAGAT +
Preference number: 5 (lower is better)
Translates to: TKCQRAKAWSVLFTVFNHLPVSP*SVSCLD
Trigger: ATCTAAGCAAGAGACAGACAATGGTGACACAGGGAG...GTGATTGAACACAGTGAACAAGACAGACCAAGCCTTGGCCCTTTGGCACTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp CTAGACACAGGAGTGCGATACAATCAATGCTCAGTACAGATTTTGAATGGATTCAGCATCCCCTCTTCATaGCCACTTAGACCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: LDTGVRYNQCSVQILNGFSIPSS*PLRPCA
Trigger: GGCACAGGGTCTAAGTGGCAATGAAGAGGGGATGCT...GAATCCATTCAAAATCTGTACTGAGCATTGATTGTATCGCACTCCTGTGTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp TCTCCTCAAACTTCATATGTTGAAACTCTGATCCCAAATGATGGTATTGCGGGGTACGGGCTTCTTTGCTaGCGATTTCTCCTCTCACAG +
Preference number: 5 (lower is better)
Translates to: SPQTSYVETLIPNDGIAGYGLLC*RFLLSQ
Trigger: CTGTGAGAGGAGAAATCGCAAGCAAAGAAGCCCGTA...CCCCGCAATACCATCATTTGGGATCAGAGTTTCAACATATGAAGTTTGAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp AAGTTACACTGCTTCAAAGTCAAATGCTTGGCTTGGAGACAGGGATTTATCTTGAGACAGGGATTTATCTaGGGATCGCAGGCCCTTAGC +
Preference number: 5 (lower is better)
Translates to: KLHCFKVKCLAWRQGFILRQGFI*GSQALS
Trigger: GCTAAGGGCCTGCGATCCCAAGATAAATCCCTGTCT...CAAGATAAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGAAGCAGTGTAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp CTTTATCCTTCTAGGACAAGCGAGAATCCCCCAAAAGCCAAGGTCATCATCAAGTTCAAAGTCAAATGCTaGGCTTGGAGACAGGGATTT +
Preference number: 5 (lower is better)
Translates to: LYPSRTSENPPKAKVIIKFKVKC*AWRQGF
Trigger: AAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGAA...CTTGATGATGACCTTGGCTTTTGGGGGATTCTCGCTTGTCCTAGAAGGATAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp TCTCCTCAAACTTCATATGTTGAAACTCTGATCCCAAATGATGGTATTGCGGGGAAGGCTTGGTCTGTCTaGTTCACTGTGTTCAATCAC +
Preference number: 5 (lower is better)
Translates to: SPQTSYVETLIPNDGIAGKAWSV*FTVFNH
Trigger: GTGATTGAACACAGTGAACAAGACAGACCAAGCCTT...CCCCGCAATACCATCATTTGGGATCAGAGTTTCAACATATGAAGTTTGAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp CTTTATCCTTCTAGGACAAGCGAGAATCCCCCAAAAGCCAAGGTCATCATCAAGTTGCCAGAGTCATTTTaGCAAAATGGGAATGGGATT +
Preference number: 5 (lower is better)
Translates to: LYPSRTSENPPKAKVIIKLPESF*QNGNGI
Trigger: AATCCCATTCCCATTTTGCAAAAATGACTCTGGCAA...CTTGATGATGACCTTGGCTTTTGGGGGATTCTCGCTTGTCCTAGAAGGATAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp TATGCAAAGGGCCTAGACACAGGAGTGCGATACAATCAATGCTCAGTACAGATTTCATTCTGTCCACAATaGCCAGAGTCATTTTTGCAA +
Preference number: 5 (lower is better)
Translates to: YAKGLDTGVRYNQCSVQISFCPQ*PESFLQ
Trigger: TTGCAAAAATGACTCTGGCAATTGTGGACAGAATGA...AATCTGTACTGAGCATTGATTGTATCGCACTCCTGTGTCTAGGCCCTTTGCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp AAGTTACACTGCTTCAAAGTCAAATGCTTGGCTTGGAGACAGGGATTTATCTTGTGCCAATGTTTTCATTaGGAAGGGGAAGTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: KLHCFKVKCLAWRQGFILCQCFH*EGEVFL
Trigger: CAGAAACACTTCCCCTTCCAAATGAAAACATTGGCA...CAAGATAAATCCCTGTCTCCAAGCCAAGCATTTGACTTTGAAGCAGTGTAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570440.2
CDS-3UTR CAA 90 bp CTTATAAGAACAGTAAGAGATAAATGTTTAAGTCCCCCAGCCTATGGTGTTCTGAGTCAAATGCTTGGCTaGGAGACAGGGATTTATCTT +
Preference number: 5 (lower is better)
Translates to: LIRTVRDKCLSPPAYGVLSQMLG*ETGIYL
Trigger: AAGATAAATCCCTGTCTCCAAGCCAAGCATTTGACT...CAGAACACCATAGGCTGGGGGACTTAAACATTTATCTCTTACTGTTCTTATAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570440.2