RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DET1 (Homo sapiens)

Ensembl gene IDs: ENSG00000140543

Ensembl transcript IDs: ENST00000268148.13, ENST00000444300.1, ENST00000557837.1, ENST00000557842.6, ENST00000558413.1, ENST00000559656.1, ENST00000564406.5, ENST00000606927.1

Found 611 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAGAGACAAATCCAGATAGGGGCTACCGCTGTAAGACTGAGCACTaGTGGGGAGCTGACCCAGCAGCCGGCGTACTGCCTCTGTGTGCC +
Preference number: 1 (lower is better)
Translates to: RETNPDRGYRCKTEH*WGADPAAGVLPLCA
Trigger: GGCACACAGAGGCAGTACGCCGGCTGCTGGGTCAGCTCCCCATCAGTGCTCAGTCTTACAGCGGTAGCCCCTATCTGGATTTGTCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR TCA 90 bp GGCCATGCCTGTCTGACTGTCCCGCTGTACCTCAGGGAAAACAGCTaGCACAGTGAGCAGGTCATCCTCATAGCAAAAGCGGCCAATGGT +
Preference number: 1 (lower is better)
Translates to: GHACLTVPLYLRENS*HSEQVILIAKAANG
Trigger: ACCATTGGCCGCTTTTGCTATGAGGATGACCTGCTCACTGTGTCAGCTGTTTTCCCTGAGGTACAGCGGGACAGTCAGACAGGCATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
3UTR TCA 90 bp CTGTCTGACTGTCCCGCTGTACCTCAGGGAAAACAGCTGACACAGTaGGCAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACAT +
Preference number: 1 (lower is better)
Translates to: LSDCPAVPQGKQLTQ*AGHPHSKSGQWSAH
Trigger: ATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTGCTCACTGTGTCAGCTGTTTTCCCTGAGGTACAGCGGGACAGTCAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
3UTR GCA 90 bp CTGCCGCAGTTGGTCAAAATACTGGAAGAAGCGCCTCTTGGCCATTaGACTACCATCCTGTTCTGCCCGGCGCCACAAATATACCAGCAA +
Preference number: 1 (lower is better)
Translates to: LPQLVKILEEAPLGH*TTILFCPAPQIYQQ
Trigger: TTGCTGGTATATTTGTGGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCCAGTATTTTGACCAACTGCGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR GCA 90 bp TCATCTGTCTCCACTGTCCCACTTAGTTCTCCCAGGAACAGCTGCTaGATCCATGGCCTCTCATCTCTTTCACAGTCCTTCCTGGAACCC +
Preference number: 1 (lower is better)
Translates to: SSVSTVPLSSPRNSC*IHGLSSLSQSFLEP
Trigger: GGGTTCCAGGAAGGACTGTGAAAGAGATGAGAGGCCATGGATGCAGCAGCTGTTCCTGGGAGAACTAAGTGGGACAGTGGAGACAGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
3UTR CCA 90 bp CGGCCAATGGTCCGCACATCAATGAAAGTGCCTTCAGGAGTCACCTaGAAGACATGGATGGTCTGTTGTTGCACAGACAAGATGGCCAGG +
Preference number: 1 (lower is better)
Translates to: RPMVRTSMKVPSGVT*KTWMVCCCTDKMAR
Trigger: CCTGGCCATCTTGTCTGTGCAACAACAGACCATCCATGTCTTCCAGGTGACTCCTGAAGGCACTTTCATTGATGTGCGGACCATTGGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR CCA 90 bp TTCGCAGCTGCCGCAGTTGGTCAAAATACTGGAAGAAGCGCCTCTTaGCCATTGCACTACCATCCTGTTCTGCCCGGCGCCACAAATATA +
Preference number: 1 (lower is better)
Translates to: FAAAAVGQNTGRSAS*PLHYHPVLPGATNI
Trigger: TATATTTGTGGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCCAGTATTTTGACCAACTGCGGCAGCTGCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR GCA 90 bp ACACAGCGGCAGTCATCAGTGAAGAGACTACACTCCCGGTTCAGGTaGTCACCATTGGCCGCAACATTGGTAATGTGCAGCAGGACAAAA +
Preference number: 1 (lower is better)
Translates to: TQRQSSVKRLHSRFR*SPLAATLVMCSRTK
Trigger: TTTTGTCCTGCTGCACATTACCAATGTTGCGGCCAATGGTGAGCACCTGAACCGGGAGTGTAGTCTCTTCACTGATGACTGCCGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR GCA 90 bp ATACTGGAAGAAGCGCCTCTTGGCCATTGCACTACCATCCTGTTCTaGCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATT +
Preference number: 1 (lower is better)
Translates to: ILEEAPLGHCTTILF*PAPQIYQQPVFEGI
Trigger: AATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCCAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR GCA 90 bp GTAAGACTGAGCACTGATGGGGAGCTGACCCAGCAGCCGGCGTACTaGCTCTGTGTGCCCTCCATACTTGGCATTTATAATAGTGTCTTT +
Preference number: 1 (lower is better)
Translates to: VRLSTDGELTQQPAY*LCVPSILGIYNSVF
Trigger: AAAGACACTATTATAAATGCCAAGTATGGAGGGCACACAGAGGCAGTACGCCGGCTGCTGGGTCAGCTCCCCATCAGTGCTCAGTCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR GCA 90 bp CCTTCATCTGTCTCCACTGTCCCACTTAGTTCTCCCAGGAACAGCTaGTGCATCCATGGCCTCTCATCTCTTTCACAGTCCTTCCTGGAA +
Preference number: 1 (lower is better)
Translates to: PSSVSTVPLSSPRNS*CIHGLSSLSQSFLE
Trigger: TTCCAGGAAGGACTGTGAAAGAGATGAGAGGCCATGGATGCAGCAGCTGTTCCTGGGAGAACTAAGTGGGACAGTGGAGACAGATGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
3UTR CCA 90 bp AGCTGCATTTTCCACATTCGCAGCTGCCGCAGTTGGTCAAAATACTaGAAGAAGCGCCTCTTGGCCATTGCACTACCATCCTGTTCTGCC +
Preference number: 1 (lower is better)
Translates to: SCIFHIRSCRSWSKY*KKRLLAIALPSCSA
Trigger: GGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCCAGTATTTTGACCAACTGCGGCAGCTGCGAATGTGGAAAATGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR TCA 90 bp GCAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATaGAAGTGCCTTCAGGAGTCACCTGGAAGACATGGATGGTCTGTT +
Preference number: 1 (lower is better)
Translates to: AGHPHSKSGQWSAHQ*KCLQESPGRHGWSV
Trigger: AACAGACCATCCATGTCTTCCAGGTGACTCCTGAAGGCACTTTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR TCA 90 bp TCAGCATTAGTCCTCTGCACAGAAATAGCGAAAGGCTCAAAAGGGTaGAAGGTGAAGGCAACAAGGCGTCGCACTGTGTGGTTGATGGGG +
Preference number: 1 (lower is better)
Translates to: SALVLCTEIAKGSKG*KVKATRRRTVWLMG
Trigger: CCCCATCAACCACACAGTGCGACGCCTTGTTGCCTTCACCTTTCACCCTTTTGAGCCTTTCGCTATTTCTGTGCAGAGGACTAATGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR TCA 90 bp CTCCAGCTTTGTGACTTTCAGAAGATTACTTACTTTCTCTGTGCCTaGATTCCTTATCTGTGGTCCCAACCACTCAGGAGGCTGAGACGG +
Preference number: 1 (lower is better)
Translates to: LQLCDFQKITYFLCA*IPYLWSQPLRRLRR
Trigger: CCGTCTCAGCCTCCTGAGTGGTTGGGACCACAGATAAGGAATTCAGGCACAGAGAAAGTAAGTAATCTTCTGAAAGTCACAAAGCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
3UTR GCA 90 bp AAAGTGCCTTCAGGAGTCACCTGGAAGACATGGATGGTCTGTTGTTaGACAGACAAGATGGCCAGGATGTTTTTGTACAAGTACAGCCCT +
Preference number: 1 (lower is better)
Translates to: KVPSGVTWKTWMVCC*TDKMARMFLYKYSP
Trigger: AGGGCTGTACTTGTACAAAAACATCCTGGCCATCTTGTCTGTGCAACAACAGACCATCCATGTCTTCCAGGTGACTCCTGAAGGCACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR CCA 90 bp TGCACAGACAAGATGGCCAGGATGTTTTTGTACAAGTACAGCCCTTaGTTGTGTGACAAGACCACCTTGTCACACTTGAACGTGCGTGTA +
Preference number: 1 (lower is better)
Translates to: CTDKMARMFLYKYSP*LCDKTTLSHLNVRV
Trigger: TACACGCACGTTCAAGTGTGACAAGGTGGTCTTGTCACACAACCAAGGGCTGTACTTGTACAAAAACATCCTGGCCATCTTGTCTGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR CCA 90 bp GAGTCACCTGGAAGACATGGATGGTCTGTTGTTGCACAGACAAGATaGCCAGGATGTTTTTGTACAAGTACAGCCCTTGGTTGTGTGACA +
Preference number: 1 (lower is better)
Translates to: ESPGRHGWSVVAQTR*PGCFCTSTALGCVT
Trigger: TGTCACACAACCAAGGGCTGTACTTGTACAAAAACATCCTGGCCATCTTGTCTGTGCAACAACAGACCATCCATGTCTTCCAGGTGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR TCA 90 bp CTCCTTGAAACATCTTCAACTCTTGGTCATACAACACATTCCCATTaGTCCAACTCCAGTGCTCTTCCACAGTATATTTTTCTTTTTCTG +
Preference number: 1 (lower is better)
Translates to: LLETSSTLGHTTHSH*SNSSALPQYIFLFL
Trigger: CAGAAAAAGAAAAATATACTGTGGAAGAGCACTGGAGTTGGATCAATGGGAATGTGTTGTATGACCAAGAGTTGAAGATGTTTCAAGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557842.6
3UTR TCA 90 bp ACAAGATTTAACTGCTTTCAGATGCAAACCATAATGCCGAAGAAGTaGCATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAA +
Preference number: 1 (lower is better)
Translates to: TRFNCFQMQTIMPKK*HEGDKSLMLSSSQQ
Trigger: TTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATGTCACTTCTTCGGCATTATGGTTTGCATCTGAAAGCAGTTAAATCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
3UTR-3UTR TCA 90 bp AAGGCAACAAGGCGTCGCACTGTGTGGTTGATGGGGCGGCCCAATAACCCCGCCTGGGAGGTAGGCAGCTaGGCCCACGATGACACAGCG +
Preference number: 2 (lower is better)
Translates to: KATRRRTVWLMGRPNNPAWEVGS*AHDDTA
Trigger: CGCTGTGTCATCGTGGGCTCAGCTGCCTACCTCCCA...GGCGGGGTTATTGGGCCGCCCCATCAACCACACAGTGCGACGCCTTGTTGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR GCA 90 bp GGGCGGCCCAATAACCCCGCCTGGATCTCAAACTTGAGCAGGCCCGAGTCCCGGCGTACTGCCTCTGTGTaGCCTCCATACTTGGCATTT +
Preference number: 2 (lower is better)
Translates to: GRPNNPAWISNLSRPESRRTASV*PPYLAF
Trigger: AAATGCCAAGTATGGAGGGCACACAGAGGCAGTACG...CCGGGACTCGGGCCTGCTCAAGTTTGAGATCCAGGCGGGGTTATTGGGCCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CCA 90 bp GGGCGGCCCAATAACCCCGCCTGGATCTCAAACTTGAGCAGGCCCGAGTCCCGGCCTTCAGGAGTCACCTaGAAGACATGGATGGTCTGT +
Preference number: 2 (lower is better)
Translates to: GRPNNPAWISNLSRPESRPSGVT*KTWMVC
Trigger: ACAGACCATCCATGTCTTCCAGGTGACTCCTGAAGG...CCGGGACTCGGGCCTGCTCAAGTTTGAGATCCAGGCGGGGTTATTGGGCCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR TCA 90 bp GGGCGGCCCAATAACCCCGCCTGGATCTCAAACTTGAGCAGGCCCGAGTCCCGGCCACCTTGTCACACTTaGACGTGCGTGTATCACATA +
Preference number: 2 (lower is better)
Translates to: GRPNNPAWISNLSRPESRPPCHT*TCVYHI
Trigger: TATGTGATACACGCACGTTCAAGTGTGACAAGGTGG...CCGGGACTCGGGCCTGCTCAAGTTTGAGATCCAGGCGGGGTTATTGGGCCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR TCA 90 bp CCAGATAATCTGGCTCTGGTGAGGCACCTACGTGCAGCAGTGTCGCATATGGAATGGGAGGTAGGCAGCTaGGCCCACGATGACACAGCG +
Preference number: 2 (lower is better)
Translates to: PDNLALVRHLRAAVSHMEWEVGS*AHDDTA
Trigger: CGCTGTGTCATCGTGGGCTCAGCTGCCTACCTCCCA...TTCCATATGCGACACTGCTGCACGTAGGTGCCTCACCAGAGCCAGATTATCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR GCA 90 bp CGAGTCCCGGGCATAGAACCTGATTGGGTGATCTCCACAAGTCTTGGGCCGCTCGCGCCTCTTGGCCATTaGACTACCATCCTGTTCTGC +
Preference number: 2 (lower is better)
Translates to: RVPGIEPDWVISTSLGPLAPLGH*TTILFC
Trigger: GCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGC...GAGCGGCCCAAGACTTGTGGAGATCACCCAATCAGGTTCTATGCCCGGGACTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CCA 90 bp GTCCCGGGCATAGAACCTGATTGGGTGATCTCCACAAGTCTTGGGCCGCTCCATGAGGGGACCGTGGGTTaGGGGTCACTGATTCACTGT +
Preference number: 2 (lower is better)
Translates to: VPGIEPDWVISTSLGPLHEGTVG*GSLIHC
Trigger: ACAGTGAATCAGTGACCCCCAACCCACGGTCCCCTC...ATGGAGCGGCCCAAGACTTGTGGAGATCACCCAATCAGGTTCTATGCCCGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR TCA 90 bp AAGAAGCGCCTCTTGGCCATTGCACTACCATCCTGTTCTGCCCGGCGCCACAAATGGCTCTCTCCCATCTaGGGTATAGCAGGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: KKRLLAIALPSCSARRHKWLSPI*GIAGWN
Trigger: GTTCCAGCCTGCTATACCTCAGATGGGAGAGAGCCA...TTTGTGGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR TCA 90 bp AAGAAGCGCCTCTTGGCCATTGCACTACCATCCTGTTCTGCCCGGCGCCACAAAAGCGGCAGTCATCAGTaGAGAGACTACACTCCCGGT +
Preference number: 2 (lower is better)
Translates to: KKRLLAIALPSCSARRHKSGSHQ*RDYTPG
Trigger: ACCGGGAGTGTAGTCTCTTCACTGATGACTGCCGCT...TTTGTGGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR TCA 90 bp CGAGTCCCGGGCATAGAACCTGATTGGGTGATCTCCACAAGTCTTGGGCCGCTCCAGCCCTTGGTTGTGTaGCAAGACCACCTTGTCACA +
Preference number: 2 (lower is better)
Translates to: RVPGIEPDWVISTSLGPLQPLVV*QDHLVT
Trigger: TGTGACAAGGTGGTCTTGTCACACAACCAAGGGCTG...GAGCGGCCCAAGACTTGTGGAGATCACCCAATCAGGTTCTATGCCCGGGACTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR TCA 90 bp GGAAGAAGCGCCTCTTGGCCATTGCACTACCATCCTGTTCTGCCCGGCGCCACATGGTCCGCACATCAATaGAAGTGCCTTCAGGAGTCA +
Preference number: 2 (lower is better)
Translates to: GRSASWPLHYHPVLPGATWSAHQ*KCLQES
Trigger: TGACTCCTGAAGGCACTTTCATTGATGTGCGGACCA...TGTGGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR GCA 90 bp GGCATAGAACCTGATTGGGTGATCTCCACAAGTCTTGGGCCGCTCCATGACAGACACTCCCGGTTCAGGTaGTCACCATTGGCCGCAACA +
Preference number: 2 (lower is better)
Translates to: GIEPDWVISTSLGPLHDRHSRFR*SPLAAT
Trigger: TGTTGCGGCCAATGGTGAGCACCTGAACCGGGAGTG...TCTGTCATGGAGCGGCCCAAGACTTGTGGAGATCACCCAATCAGGTTCTATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CCA 90 bp TCCACATTCGCAGCTGCCGCAGTTGGTCAAAATACTGGAAGAAGCGCCTCTTGGGAGGGGACCGTGGGTTaGGGGTCACTGATTCACTGT +
Preference number: 2 (lower is better)
Translates to: STFAAAAVGQNTGRSASWEGTVG*GSLIHC
Trigger: ACAGTGAATCAGTGACCCCCAACCCACGGTCCCCTC...CCAAGAGGCGCTTCTTCCAGTATTTTGACCAACTGCGGCAGCTGCGAATGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR CAA 90 bp GCTGCCGCAGTTGGTCAAAATACTGGAAGAAGCGCCTCTTGGCCATaGCACTACCATCCTGTTCTGCCCGGCGCCACAAATATACCAGCA +
Preference number: 2 (lower is better)
Translates to: AAAVGQNTGRSASWP*HYHPVLPGATNIPA
Trigger: TGCTGGTATATTTGTGGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCCAGTATTTTGACCAACTGCGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR TCA 90 bp GGGCGGCCCAATAACCCCGCCTGGATCTCAAACTTGAGCAGGCCCGAGTCCCGGACTTGTCATCATAACTaGAGAGAGACAAATCCAGAT +
Preference number: 2 (lower is better)
Translates to: GRPNNPAWISNLSRPESRTCHHN*RETNPD
Trigger: ATCTGGATTTGTCTCTCTTCAGTTATGATGACAAGT...CCGGGACTCGGGCCTGCTCAAGTTTGAGATCCAGGCGGGGTTATTGGGCCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR GCA 90 bp GTCCCGGGCATAGAACCTGATTGGGTGATCTCCACAAGTCTTGGGCCGCTCCATACTACCATCCTGTTCTaGCCGGCGCCACAAATATAC +
Preference number: 2 (lower is better)
Translates to: VPGIEPDWVISTSLGPLHTTILF*PAPQIY
Trigger: GTATATTTGTGGCGCCGGGCAGAACAGGATGGTAGT...ATGGAGCGGCCCAAGACTTGTGGAGATCACCCAATCAGGTTCTATGCCCGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CCA 90 bp GTCCCGGGCATAGAACCTGATTGGGTGATCTCCACAAGTCTTGGGCCGCTCCATCGCAGCTGCCGCAGTTaGTCAAAATACTGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: VPGIEPDWVISTSLGPLHRSCRS*SKYWKK
Trigger: CTTCTTCCAGTATTTTGACCAACTGCGGCAGCTGCG...ATGGAGCGGCCCAAGACTTGTGGAGATCACCCAATCAGGTTCTATGCCCGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR CAA 90 bp ATTCGCAGCTGCCGCAGTTGGTCAAAATACTGGAAGAAGCGCCTCTaGGCCATTGCACTACCATCCTGTTCTGCCCGGCGCCACAAATAT +
Preference number: 2 (lower is better)
Translates to: IRSCRSWSKYWKKRL*AIALPSCSARRHKY
Trigger: ATATTTGTGGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCCAGTATTTTGACCAACTGCGGCAGCTGCGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR TCA 90 bp CGAGTCCCGGGCATAGAACCTGATTGGGTGATCTCCACAAGTCTTGGGCCGCTCCGGTGTGAAGGTCAATaGTATGGAGGGAATAGTCTT +
Preference number: 2 (lower is better)
Translates to: RVPGIEPDWVISTSLGPLRCEGQ*YGGNSL
Trigger: AAGACTATTCCCTCCATATCATTGACCTTCACACCG...GAGCGGCCCAAGACTTGTGGAGATCACCCAATCAGGTTCTATGCCCGGGACTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR GCA 90 bp TTCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAACACTCCCGGTTCAGGTaGTCACCATTGGCCGCAACA +
Preference number: 2 (lower is better)
Translates to: FCPAPQIYQQPVFEGIDEHSRFR*SPLAAT
Trigger: TGTTGCGGCCAATGGTGAGCACCTGAACCGGGAGTG...TTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CCA 90 bp GTCCCGGGCATAGAACCTGATTGGGTGATCTCCACAAGTCTTGGGCCGCTCCATGTCACCTGGAAGACATaGATGGTCTGTTGTTGCACA +
Preference number: 2 (lower is better)
Translates to: VPGIEPDWVISTSLGPLHVTWKT*MVCCCT
Trigger: TGTGCAACAACAGACCATCCATGTCTTCCAGGTGAC...ATGGAGCGGCCCAAGACTTGTGGAGATCACCCAATCAGGTTCTATGCCCGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR GCA 90 bp GGCATAGAACCTGATTGGGTGATCTCCACAAGTCTTGGGCCGCTCCATGACAGAACTACCATCCTGTTCTaGCCGGCGCCACAAATATAC +
Preference number: 2 (lower is better)
Translates to: GIEPDWVISTSLGPLHDRTTILF*PAPQIY
Trigger: GTATATTTGTGGCGCCGGGCAGAACAGGATGGTAGT...TCTGTCATGGAGCGGCCCAAGACTTGTGGAGATCACCCAATCAGGTTCTATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CCA 90 bp GTCCCGGGCATAGAACCTGATTGGGTGATCTCCACAAGTCTTGGGCCGCTCCATGTTGCACAGACAAGATaGCCAGGATGTTTTTGTACA +
Preference number: 2 (lower is better)
Translates to: VPGIEPDWVISTSLGPLHVAQTR*PGCFCT
Trigger: TGTACAAAAACATCCTGGCCATCTTGTCTGTGCAAC...ATGGAGCGGCCCAAGACTTGTGGAGATCACCCAATCAGGTTCTATGCCCGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR TCA 90 bp CAGCCGGCGTACTGCCTCTGTGTGCCCTCCATACTTGGCATTTATAATAGTGTCCCTGTGATGGATCTGTaGCTCGCAGTGTTACTACAT +
Preference number: 2 (lower is better)
Translates to: QPAYCLCVPSILGIYNSVPVMDL*LAVLLH
Trigger: ATGTAGTAACACTGCGAGTCACAGATCCATCACAGG...GACACTATTATAAATGCCAAGTATGGAGGGCACACAGAGGCAGTACGCCGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR TCA 90 bp TCACAGTCCTTCCTGGAACCCAAGTACTTGAAAGCATTGAGTATGATAGGAACAGTCGCACTGTGTGGTTaGTGGGGCGGCCCAATAACC +
Preference number: 2 (lower is better)
Translates to: SQSFLEPKYLKALSMIGTVALCG*WGGPIT
Trigger: GGTTATTGGGCCGCCCCATCAACCACACAGTGCGAC...TGTTCCTATCATACTCAATGCTTTCAAGTACTTGGGTTCCAGGAAGGACTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
3UTR CAA 90 bp GAAAGTGCCTTCAGGAGTCACCTGGAAGACATGGATGGTCTGTTGTaGCACAGACAAGATGGCCAGGATGTTTTTGTACAAGTACAGCCC +
Preference number: 2 (lower is better)
Translates to: ESAFRSHLEDMDGLL*HRQDGQDVFVQVQP
Trigger: GGGCTGTACTTGTACAAAAACATCCTGGCCATCTTGTCTGTGCAACAACAGACCATCCATGTCTTCCAGGTGACTCCTGAAGGCACTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR TCA 90 bp CATATGGAAGTTGACAACATACTCAGCATTAGTCCTCTGCACAGAAATAGCGAACAGCTGAGCCCACGATaGCACAGCGGCAGTCATCAG +
Preference number: 2 (lower is better)
Translates to: HMEVDNILSISPLHRNSEQLSPR*HSGSHQ
Trigger: CTGATGACTGCCGCTGTGTCATCGTGGGCTCAGCTG...TTCGCTATTTCTGTGCAGAGGACTAATGCTGAGTATGTTGTCAACTTCCATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR TCA 90 bp AAAAGCTCATCTGATGTATTCTCAAACACAGCAATCACCTCTGTCGTCACCATACAGCTGAGCCCACGATaGCACAGCGGCAGTCATCAG +
Preference number: 2 (lower is better)
Translates to: KSSSDVFSNTAITSVVTIQLSPR*HSGSHQ
Trigger: CTGATGACTGCCGCTGTGTCATCGTGGGCTCAGCTG...TATGGTGACGACAGAGGTGATTGCTGTGTTTGAGAATACATCAGATGAGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
3UTR-3UTR TCA 90 bp ACGCCTGGCCTGAAGTCTAAGTTTGAATTCTGGCTCCAGCTTTGTGACTTTCAGTGGGTTGGGGGTCACTaGTTCACTGTTCCGATATAC +
Preference number: 2 (lower is better)
Translates to: TPGLKSKFEFWLQLCDFQWVGGH*FTVPIY
Trigger: GTATATCGGAACAGTGAATCAGTGACCCCCAACCCA...CTGAAAGTCACAAAGCTGGAGCCAGAATTCAAACTTAGACTTCAGGCCAGGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557842.6
3UTR-3UTR TCA 90 bp AGGCTCAAAAGGGTGAAAGGTGAAGGCAACAAGGCGTCGCACTGTGTGGTTGATATTGTTGCTAGAAGCTaGGCAGGGAAACTGAACTTC +
Preference number: 2 (lower is better)
Translates to: RLKRVKGEGNKASHCVVDIVARS*AGKLNF
Trigger: GAAGTTCAGTTTCCCTGCTCAGCTTCTAGCAACAAT...ATCAACCACACAGTGCGACGCCTTGTTGCCTTCACCTTTCACCCTTTTGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
3UTR-3UTR TCA 90 bp CTGGGCCTCTCCTTGAAACATCTTCAACTCTTGGTCATACAACACATTCCCATTATAATCTGGCTCTGGTaGGGCACCTACGTGCAGCAG +
Preference number: 2 (lower is better)
Translates to: LGLSLKHLQLLVIQHIPIIIWLW*GTYVQQ
Trigger: CTGCTGCACGTAGGTGCCTCACCAGAGCCAGATTAT...AATGGGAATGTGTTGTATGACCAAGAGTTGAAGATGTTTCAAGGAGAGGCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
3UTR-3UTR GCA 90 bp ACGCCTGGCCTGAAGTCTAAGTTTGAATTCTGGCTCCAGCTTTGTGACTTTCAGTGGATGGTCTGTTGTTaGACAGACAAGATGGCCAGG +
Preference number: 2 (lower is better)
Translates to: TPGLKSKFEFWLQLCDFQWMVCC*TDKMAR
Trigger: CCTGGCCATCTTGTCTGTGCAACAACAGACCATCCA...CTGAAAGTCACAAAGCTGGAGCCAGAATTCAAACTTAGACTTCAGGCCAGGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
3UTR-3UTR TCA 90 bp TATTCTCAAACACAGCAATCACCTCTGTCGTCACCATATTGTACACCACAAAGATTGGCCATGCCTGTCTaGCTGTCCCGCTGTACCTCA +
Preference number: 2 (lower is better)
Translates to: YSQTQQSPLSSPYCTPQRLAMPV*LSRCTS
Trigger: TGAGGTACAGCGGGACAGTCAGACAGGCATGGCCAA...TCTTTGTGGTGTACAATATGGTGACGACAGAGGTGATTGCTGTGTTTGAGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
3UTR-3UTR TCA 90 bp CTGGGCCTCTCCTTGAAACATCTTCAACTCTTGGTCATACAACACATTCCCATTTCTTGGGCCGCTCCATaGCAGATACCCACTTGTCAT +
Preference number: 2 (lower is better)
Translates to: LGLSLKHLQLLVIQHIPISWAAP*QIPTCH
Trigger: ATGACAAGTGGGTATCTGTCATGGAGCGGCCCAAGA...AATGGGAATGTGTTGTATGACCAAGAGTTGAAGATGTTTCAAGGAGAGGCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
3UTR-3UTR CCA 90 bp GAAGTTGACAACATACTCAGCATTAGTCCTCTGCACAGAAATAGCGAAAGGCTCGGAAGAAGCGCCTCTTaGCCATTGCACTACCATCCT +
Preference number: 2 (lower is better)
Translates to: EVDNILSISPLHRNSERLGRSAS*PLHYHP
Trigger: AGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCC...GAGCCTTTCGCTATTTCTGTGCAGAGGACTAATGCTGAGTATGTTGTCAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CCA 90 bp CCACTTGTCATCATAACTGAAGAGAGACAAATCCAGATAGGGGCTACCGCTGTACGCAGCTGCCGCAGTTaGTCAAAATACTGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: PLVIITEERQIQIGATAVRSCRS*SKYWKK
Trigger: CTTCTTCCAGTATTTTGACCAACTGCGGCAGCTGCG...TACAGCGGTAGCCCCTATCTGGATTTGTCTCTCTTCAGTTATGATGACAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR CAA 90 bp ACAGACAAGATGGCCAGGATGTTTTTGTACAAGTACAGCCCTTGGTaGTGTGACAAGACCACCTTGTCACACTTGAACGTGCGTGTATCA +
Preference number: 2 (lower is better)
Translates to: TDKMARMFLYKYSPW*CDKTTLSHLNVRVS
Trigger: TGATACACGCACGTTCAAGTGTGACAAGGTGGTCTTGTCACACAACCAAGGGCTGTACTTGTACAAAAACATCCTGGCCATCTTGTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR CAA 90 bp ACATGGATGGTCTGTTGTTGCACAGACAAGATGGCCAGGATGTTTTaGTACAAGTACAGCCCTTGGTTGTGTGACAAGACCACCTTGTCA +
Preference number: 2 (lower is better)
Translates to: TWMVCCCTDKMARMF*YKYSPWLCDKTTLS
Trigger: TGACAAGGTGGTCTTGTCACACAACCAAGGGCTGTACTTGTACAAAAACATCCTGGCCATCTTGTCTGTGCAACAACAGACCATCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR TCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACTGGCTCTCTCCCATCTaGGGTATAGCAGGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: DLINAGHSHRENARGYYNWLSPI*GIAGWN
Trigger: GTTCCAGCCTGCTATACCTCAGATGGGAGAGAGCCA...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
3UTR-3UTR TCA 90 bp AGGCTCAAAAGGGTGAAAGGTGAAGGCAACAAGGCGTCGCACTGTGTGGTTGATATAATGCCGAAGAAGTaGCATGAAGGGGATAAAAGT +
Preference number: 2 (lower is better)
Translates to: RLKRVKGEGNKASHCVVDIMPKK*HEGDKS
Trigger: ACTTTTATCCCCTTCATGTCACTTCTTCGGCATTAT...ATCAACCACACAGTGCGACGCCTTGTTGCCTTCACCTTTCACCCTTTTGAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR TCA 90 bp GACAGATACCCACTTGTCATCATAACTGAAGAGAGACAAATCCAGATAGGGGCTTGGGTTGGGGGTCACTaGTTCACTGTTCCGATATAC +
Preference number: 2 (lower is better)
Translates to: DRYPLVIITEERQIQIGAWVGGH*FTVPIY
Trigger: GTATATCGGAACAGTGAATCAGTGACCCCCAACCCA...AGCCCCTATCTGGATTTGTCTCTCTTCAGTTATGATGACAAGTGGGTATCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR TCA 90 bp GAAGTTGACAACATACTCAGCATTAGTCCTCTGCACAGAAATAGCGAAAGGCTCTGGTCCGCACATCAATaGAAGTGCCTTCAGGAGTCA +
Preference number: 2 (lower is better)
Translates to: EVDNILSISPLHRNSERLWSAHQ*KCLQES
Trigger: TGACTCCTGAAGGCACTTTCATTGATGTGCGGACCA...GAGCCTTTCGCTATTTCTGTGCAGAGGACTAATGCTGAGTATGTTGTCAACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR TCA 90 bp CTTGTCATCATAACTGAAGAGAGACAAATCCAGATAGGGGCTACCGCTGTAAGAAAACAGCTGACACAGTaGGCAGGTCATCCTCATAGC +
Preference number: 2 (lower is better)
Translates to: LVIITEERQIQIGATAVRKQLTQ*AGHPHS
Trigger: GCTATGAGGATGACCTGCTCACTGTGTCAGCTGTTT...TCTTACAGCGGTAGCCCCTATCTGGATTTGTCTCTCTTCAGTTATGATGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR TCA 90 bp GACAGATACCCACTTGTCATCATAACTGAAGAGAGACAAATCCAGATAGGGGCTGTGTCTTTGAACCTGTaGTGGATCTGTGACTCGCAG +
Preference number: 2 (lower is better)
Translates to: DRYPLVIITEERQIQIGAVSLNL*WICDSQ
Trigger: CTGCGAGTCACAGATCCATCACAGGTTCAAAGACAC...AGCCCCTATCTGGATTTGTCTCTCTTCAGTTATGATGACAAGTGGGTATCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557837.1
3UTR-3UTR GCA 90 bp CCACTTGTCATCATAACTGAAGAGAGACAAATCCAGATAGGGGCTACCGCTGTATTCCACATTCGCAGCTaGCGCAGTTGGTCAAAATAC +
Preference number: 2 (lower is better)
Translates to: PLVIITEERQIQIGATAVFHIRS*RSWSKY
Trigger: GTATTTTGACCAACTGCGGCAGCTGCGAATGTGGAA...TACAGCGGTAGCCCCTATCTGGATTTGTCTCTCTTCAGTTATGATGACAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR CAA 90 bp ATGCCTTTGTATATGCTGGGCCTCTCCTTGAAACATCTTCAACTCTaGGTCATACAACACATTCCCATTGATCCAACTCCAGTGCTCTTC +
Preference number: 2 (lower is better)
Translates to: MPLYMLGLSLKHLQL*VIQHIPIDPTPVLF
Trigger: GAAGAGCACTGGAGTTGGATCAATGGGAATGTGTTGTATGACCAAGAGTTGAAGATGTTTCAAGGAGAGGCCCAGCATATACAAAGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
3UTR-3UTR CCA 90 bp CCACTTGTCATCATAACTGAAGAGAGACAAATCCAGATAGGGGCTACCGCTGTAGTTGCACAGACAAGATaGCCAGGATGTTTTTGTACA +
Preference number: 2 (lower is better)
Translates to: PLVIITEERQIQIGATAVVAQTR*PGCFCT
Trigger: TGTACAAAAACATCCTGGCCATCTTGTCTGTGCAAC...TACAGCGGTAGCCCCTATCTGGATTTGTCTCTCTTCAGTTATGATGACAAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR TCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAAAATTCCATTAGGTTaGGCCACCCTCACTCCTCTC +
Preference number: 2 (lower is better)
Translates to: DLINAGHSHRENARGYYNKIPLG*ATLTPL
Trigger: GAGAGGAGTGAGGGTGGCTCAACCTAATGGAATTTT...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
3UTR CAA 90 bp GATGGATCTGTGACTCGCAGTGTTACTACATCCTCACTAGTGTACTaGATAAACAGGTGGTTTTCATCCAGAAGCTGCATTTTCCACATT +
Preference number: 2 (lower is better)
Translates to: DGSVTRSVTTSSLVY*INRWFSSRSCIFHI
Trigger: AATGTGGAAAATGCAGCTTCTGGATGAAAACCACCTGTTTATCAAGTACACTAGTGAGGATGTAGTAACACTGCGAGTCACAGATCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR CCA 72 bp ACTGTGTGGTTGATGGGGCGGCCCAATAACCCCGCCTaGATCTCAAACTTGAGCAGGCCCGAGTCCCGGGCA +
Preference number: 3 (lower is better)
Translates to: TVWLMGRPNNPA*ISNLSRPESRA
Trigger: TGCCCGGGACTCGGGCCTGCTCAAGTTTGAGATCCAGGCGGGGTTATTGGGCCGCCCCATCAACCACACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR CCA 72 bp GCCGCAGTTGGTCAAAATACTGGAAGAAGCGCCTCTTaGCCATTGCACTACCATCCTGTTCTGCCCGGCGCC +
Preference number: 3 (lower is better)
Translates to: AAVGQNTGRSAS*PLHYHPVLPGA
Trigger: GGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCCAGTATTTTGACCAACTGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CAA 90 bp GTCCCGGGCATAGAACCTGATTGGGTGATCTCCACAAGTCTTGGGCCGCTCCATTGGAAGAAGCGCCTCTaGGCCATTGCACTACCATCC +
Preference number: 3 (lower is better)
Translates to: VPGIEPDWVISTSLGPLHWKKRL*AIALPS
Trigger: GGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCCA...ATGGAGCGGCCCAAGACTTGTGGAGATCACCCAATCAGGTTCTATGCCCGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CAA 90 bp GTCCCGGGCATAGAACCTGATTGGGTGATCTCCACAAGTCTTGGGCCGCTCCATCCATTGGCCGCAACATaGGTAATGTGCAGCAGGACA +
Preference number: 3 (lower is better)
Translates to: VPGIEPDWVISTSLGPLHPLAAT*VMCSRT
Trigger: TGTCCTGCTGCACATTACCAATGTTGCGGCCAATGG...ATGGAGCGGCCCAAGACTTGTGGAGATCACCCAATCAGGTTCTATGCCCGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR GCA 72 bp GAAGCGCCTCTTGGCCATTGCACTACCATCCTGTTCTaGCCGGCGCCACAAATATACCAGCAACCGGTGTTT +
Preference number: 3 (lower is better)
Translates to: EAPLGHCTTILF*PAPQIYQQPVF
Trigger: AAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR GCA 72 bp AGCACTGATGGGGAGCTGACCCAGCAGCCGGCGTACTaGCTCTGTGTGCCCTCCATACTTGGCATTTATAAT +
Preference number: 3 (lower is better)
Translates to: STDGELTQQPAY*LCVPSILGIYN
Trigger: ATTATAAATGCCAAGTATGGAGGGCACACAGAGGCAGTACGCCGGCTGCTGGGTCAGCTCCCCATCAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CAA 90 bp GTCCCGGGCATAGAACCTGATTGGGTGATCTCCACAAGTCTTGGGCCGCTCCATAGTAGTCGGGAGCTTTaGCTTTGGAGTCCACTGAGA +
Preference number: 3 (lower is better)
Translates to: VPGIEPDWVISTSLGPLHSSREL*LWSPLR
Trigger: TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACT...ATGGAGCGGCCCAAGACTTGTGGAGATCACCCAATCAGGTTCTATGCCCGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CAA 90 bp CCAGATAATCTGGCTCTGGTGAGGCACCTACGTGCAGCAGTGTCGCATATGGAAAGCGCCTCTTGGCCATaGCACTACCATCCTGTTCTG +
Preference number: 3 (lower is better)
Translates to: PDNLALVRHLRAAVSHMESASWP*HYHPVL
Trigger: CAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCT...TTCCATATGCGACACTGCTGCACGTAGGTGCCTCACCAGAGCCAGATTATCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR TCA 72 bp TGTCCCGCTGTACCTCAGGGAAAACAGCTGACACAGTaGGCAGGTCATCCTCATAGCAAAAGCGGCCAATGG +
Preference number: 3 (lower is better)
Translates to: CPAVPQGKQLTQ*AGHPHSKSGQW
Trigger: CCATTGGCCGCTTTTGCTATGAGGATGACCTGCTCACTGTGTCAGCTGTTTTCCCTGAGGTACAGCGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
3UTR GCA 72 bp GTCTCCACTGTCCCACTTAGTTCTCCCAGGAACAGCTaGTGCATCCATGGCCTCTCATCTCTTTCACAGTCC +
Preference number: 3 (lower is better)
Translates to: VSTVPLSSPRNS*CIHGLSSLSQS
Trigger: GGACTGTGAAAGAGATGAGAGGCCATGGATGCAGCAGCTGTTCCTGGGAGAACTAAGTGGGACAGTGGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
3UTR-3UTR CAA 90 bp ATGGCCAGGATGTTTTTGTACAAGTACAGCCCTTGGTTGTGTGACAAGACCACCAGAGGGGACCGTGGGTaGGGGGTCACTGATTCACTG +
Preference number: 3 (lower is better)
Translates to: MARMFLYKYSPWLCDKTTRGDRG*GVTDSL
Trigger: CAGTGAATCAGTGACCCCCAACCCACGGTCCCCTCT...GGTGGTCTTGTCACACAACCAAGGGCTGTACTTGTACAAAAACATCCTGGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CAA 90 bp AGGCTCAAAAGGGTGAAAGGTGAAGGCAACAAGGCGTCGCACTGTGTGGTTGATTGGAAGAAGCGCCTCTaGGCCATTGCACTACCATCC +
Preference number: 3 (lower is better)
Translates to: RLKRVKGEGNKASHCVVDWKKRL*AIALPS
Trigger: GGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCCA...ATCAACCACACAGTGCGACGCCTTGTTGCCTTCACCTTTCACCCTTTTGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR TCA 72 bp GCCCTTGGTTGTGTGACAAGACCACCTTGTCACACTTaGACGTGCGTGTATCACATAAGCGGCCGGTGTGAA +
Preference number: 3 (lower is better)
Translates to: ALGCVTRPPCHT*TCVYHISGRCE
Trigger: TTCACACCGGCCGCTTATGTGATACACGCACGTTCAAGTGTGACAAGGTGGTCTTGTCACACAACCAAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR TCA 72 bp ATGAAAGGATCCCTAAAGGGATTGGCCATGCCTGTCTaGCTGTCCCGCTGTACCTCAGGGAAAACAGCTGAC +
Preference number: 3 (lower is better)
Translates to: MKGSLKGLAMPV*LSRCTSGKTAD
Trigger: GTCAGCTGTTTTCCCTGAGGTACAGCGGGACAGTCAGACAGGCATGGCCAATCCCTTTAGGGATCCTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
3UTR TCA 72 bp GTCCTCTGCACAGAAATAGCGAAAGGCTCAAAAGGGTaGAAGGTGAAGGCAACAAGGCGTCGCACTGTGTGG +
Preference number: 3 (lower is better)
Translates to: VLCTEIAKGSKG*KVKATRRRTVW
Trigger: CCACACAGTGCGACGCCTTGTTGCCTTCACCTTTCACCCTTTTGAGCCTTTCGCTATTTCTGTGCAGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR TCA 72 bp GGCAAAGTCTTGGAAGACCAGATAATCTGGCTCTGGTaGGGCACCTACGTGCAGCAGTGTCGCATATGGAAG +
Preference number: 3 (lower is better)
Translates to: GKVLEDQIIWLW*GTYVQQCRIWK
Trigger: CTTCCATATGCGACACTGCTGCACGTAGGTGCCTCACCAGAGCCAGATTATCTGGTCTTCCAAGACTTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR GCA 72 bp CAGTCATCAGTGAAGAGACTACACTCCCGGTTCAGGTaGTCACCATTGGCCGCAACATTGGTAATGTGCAGC +
Preference number: 3 (lower is better)
Translates to: QSSVKRLHSRFR*SPLAATLVMCS
Trigger: GCTGCACATTACCAATGTTGCGGCCAATGGTGAGCACCTGAACCGGGAGTGTAGTCTCTTCACTGATGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR GCA 72 bp TCCACTGTCCCACTTAGTTCTCCCAGGAACAGCTGCTaGATCCATGGCCTCTCATCTCTTTCACAGTCCTTC +
Preference number: 3 (lower is better)
Translates to: STVPLSSPRNSC*IHGLSSLSQSF
Trigger: GAAGGACTGTGAAAGAGATGAGAGGCCATGGATGCAGCAGCTGTTCCTGGGAGAACTAAGTGGGACAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
3UTR CCA 72 bp TTCCACATTCGCAGCTGCCGCAGTTGGTCAAAATACTaGAAGAAGCGCCTCTTGGCCATTGCACTACCATCC +
Preference number: 3 (lower is better)
Translates to: FHIRSCRSWSKY*KKRLLAIALPS
Trigger: GGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCCAGTATTTTGACCAACTGCGGCAGCTGCGAATGTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CAA 90 bp AGAGGGGACCGTGGGTTGGGGGTCACTGATTCACTGTTCCGATATACCTCAAAACCATTGGCCGCAACATaGGTAATGTGCAGCAGGACA +
Preference number: 3 (lower is better)
Translates to: RGDRGLGVTDSLFRYTSKPLAAT*VMCSRT
Trigger: TGTCCTGCTGCACATTACCAATGTTGCGGCCAATGG...TTTTGAGGTATATCGGAACAGTGAATCAGTGACCCCCAACCCACGGTCCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CAA 90 bp CCACTTGTCATCATAACTGAAGAGAGACAAATCCAGATAGGGGCTACCGCTGTAAGAGGGGACCGTGGGTaGGGGGTCACTGATTCACTG +
Preference number: 3 (lower is better)
Translates to: PLVIITEERQIQIGATAVRGDRG*GVTDSL
Trigger: CAGTGAATCAGTGACCCCCAACCCACGGTCCCCTCT...TACAGCGGTAGCCCCTATCTGGATTTGTCTCTCTTCAGTTATGATGACAAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CAA 90 bp CTTGGAAGACCAGATAATCTGGCTCTGGTGAGGCACCTACGTGCAGCAGTGTCGACCACCTTGTCACACTaGAACGTGCGTGTATCACAT +
Preference number: 3 (lower is better)
Translates to: LGRPDNLALVRHLRAAVSTTLSH*NVRVSH
Trigger: ATGTGATACACGCACGTTCAAGTGTGACAAGGTGGT...CGACACTGCTGCACGTAGGTGCCTCACCAGAGCCAGATTATCTGGTCTTCCAAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CAA 90 bp CCAGATAATCTGGCTCTGGTGAGGCACCTACGTGCAGCAGTGTCGCATATGGAATGTGACAAGACCACCTaGTCACACTTGAACGTGCGT +
Preference number: 3 (lower is better)
Translates to: PDNLALVRHLRAAVSHMECDKTT*SHLNVR
Trigger: ACGCACGTTCAAGTGTGACAAGGTGGTCTTGTCACA...TTCCATATGCGACACTGCTGCACGTAGGTGCCTCACCAGAGCCAGATTATCTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CAA 90 bp CCAGATAATCTGGCTCTGGTGAGGCACCTACGTGCAGCAGTGTCGCATATGGAAAAGTACAGCCCTTGGTaGTGTGACAAGACCACCTTG +
Preference number: 3 (lower is better)
Translates to: PDNLALVRHLRAAVSHMEKYSPW*CDKTTL
Trigger: CAAGGTGGTCTTGTCACACAACCAAGGGCTGTACTT...TTCCATATGCGACACTGCTGCACGTAGGTGCCTCACCAGAGCCAGATTATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR TCA 72 bp TGCGTGTATCACATAAGCGGCCGGTGTGAAGGTCAATaGTATGGAGGGAATAGTCTTCTAGAGGGGACCGTG +
Preference number: 3 (lower is better)
Translates to: CVYHISGRCEGQ*YGGNSLLEGTV
Trigger: CACGGTCCCCTCTAGAAGACTATTCCCTCCATATCATTGACCTTCACACCGGCCGCTTATGTGATACACGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR TCA 72 bp CCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATaGAAGTGCCTTCAGGAGTCACCTGGAAGACATGGA +
Preference number: 3 (lower is better)
Translates to: PHSKSGQWSAHQ*KCLQESPGRHG
Trigger: TCCATGTCTTCCAGGTGACTCCTGAAGGCACTTTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR GCA 72 bp TTGGTCAAAATACTGGAAGAAGCGCCTCTTGGCCATTaGACTACCATCCTGTTCTGCCCGGCGCCACAAATA +
Preference number: 3 (lower is better)
Translates to: LVKILEEAPLGH*TTILFCPAPQI
Trigger: TATTTGTGGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCCAGTATTTTGACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CAA 90 bp GAGCAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAAAGTATGGATGGTCTGTTGTaGCACAGACAAGATGGCCAG +
Preference number: 3 (lower is better)
Translates to: EQVILIAKAANGPHINESMDGLL*HRQDGQ
Trigger: CTGGCCATCTTGTCTGTGCAACAACAGACCATCCAT...ACTTTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CAA 90 bp CAGCCGGCGTACTGCCTCTGTGTGCCCTCCATACTTGGCATTTATAATAGTGTCACCAGCAACCGGTGTTaGAGGGAATTGATGAAAGGA +
Preference number: 3 (lower is better)
Translates to: QPAYCLCVPSILGIYNSVTSNRC*RELMKG
Trigger: TCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGT...GACACTATTATAAATGCCAAGTATGGAGGGCACACAGAGGCAGTACGCCGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR CCA 72 bp TATGGAGGGAATAGTCTTCTAGAGGGGACCGTGGGTTaGGGGTCACTGATTCACTGTTCCGATATACCTCAA +
Preference number: 3 (lower is better)
Translates to: YGGNSLLEGTVG*GSLIHCSDIPQ
Trigger: TTGAGGTATATCGGAACAGTGAATCAGTGACCCCCAACCCACGGTCCCCTCTAGAAGACTATTCCCTCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR CCA 72 bp GTCCGCACATCAATGAAAGTGCCTTCAGGAGTCACCTaGAAGACATGGATGGTCTGTTGTTGCACAGACAAG +
Preference number: 3 (lower is better)
Translates to: VRTSMKVPSGVT*KTWMVCCCTDK
Trigger: CTTGTCTGTGCAACAACAGACCATCCATGTCTTCCAGGTGACTCCTGAAGGCACTTTCATTGATGTGCGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR CCA 72 bp AGAAGCTGCATTTTCCACATTCGCAGCTGCCGCAGTTaGTCAAAATACTGGAAGAAGCGCCTCTTGGCCATT +
Preference number: 3 (lower is better)
Translates to: RSCIFHIRSCRS*SKYWKKRLLAI
Trigger: AATGGCCAAGAGGCGCTTCTTCCAGTATTTTGACCAACTGCGGCAGCTGCGAATGTGGAAAATGCAGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CAA 90 bp TTCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAATCGGGAGCTTTTGCTTaGGAGTCCACTGAGATAAGT +
Preference number: 3 (lower is better)
Translates to: FCPAPQIYQQPVFEGIDESGAFA*ESTEIS
Trigger: ACTTATCTCAGTGGACTCCAAAGCAAAAGCTCCCGA...TTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CAA 90 bp ATGGCCAGGATGTTTTTGTACAAGTACAGCCCTTGGTTGTGTGACAAGACCACCTTCAGGTGCTCACCATaGGCCGCAACATTGGTAATG +
Preference number: 3 (lower is better)
Translates to: MARMFLYKYSPWLCDKTTFRCSP*AATLVM
Trigger: CATTACCAATGTTGCGGCCAATGGTGAGCACCTGAA...GGTGGTCTTGTCACACAACCAAGGGCTGTACTTGTACAAAAACATCCTGGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CAA 90 bp CTTGTCATCATAACTGAAGAGAGACAAATCCAGATAGGGGCTACCGCTGTAAGAAGCGCCTCTTGGCCATaGCACTACCATCCTGTTCTG +
Preference number: 3 (lower is better)
Translates to: LVIITEERQIQIGATAVRSASWP*HYHPVL
Trigger: CAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCT...TCTTACAGCGGTAGCCCCTATCTGGATTTGTCTCTCTTCAGTTATGATGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CAA 90 bp GGAAGACATGGATGGTCTGTTGTTGCACAGACAAGATGGCCAGGATGTTTTTGTACCACCTTGTCACACTaGAACGTGCGTGTATCACAT +
Preference number: 3 (lower is better)
Translates to: GRHGWSVVAQTRWPGCFCTTLSH*NVRVSH
Trigger: ATGTGATACACGCACGTTCAAGTGTGACAAGGTGGT...ACAAAAACATCCTGGCCATCTTGTCTGTGCAACAACAGACCATCCATGTCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CAA 90 bp TCTGTTGTTGCACAGACAAGATGGCCAGGATGTTTTTGTACAAGTACAGCCCTTTGTGACAAGACCACCTaGTCACACTTGAACGTGCGT +
Preference number: 3 (lower is better)
Translates to: SVVAQTRWPGCFCTSTALCDKTT*SHLNVR
Trigger: ACGCACGTTCAAGTGTGACAAGGTGGTCTTGTCACA...AAGGGCTGTACTTGTACAAAAACATCCTGGCCATCTTGTCTGTGCAACAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CAA 90 bp GAAGTTGACAACATACTCAGCATTAGTCCTCTGCACAGAAATAGCGAAAGGCTCAAGTACAGCCCTTGGTaGTGTGACAAGACCACCTTG +
Preference number: 3 (lower is better)
Translates to: EVDNILSISPLHRNSERLKYSPW*CDKTTL
Trigger: CAAGGTGGTCTTGTCACACAACCAAGGGCTGTACTT...GAGCCTTTCGCTATTTCTGTGCAGAGGACTAATGCTGAGTATGTTGTCAACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CAA 90 bp CTTGTCATCATAACTGAAGAGAGACAAATCCAGATAGGGGCTACCGCTGTAAGATCGCAGCTGCCGCAGTaGGTCAAAATACTGGAAGAA +
Preference number: 3 (lower is better)
Translates to: LVIITEERQIQIGATAVRSQLPQ*VKILEE
Trigger: TTCTTCCAGTATTTTGACCAACTGCGGCAGCTGCGA...TCTTACAGCGGTAGCCCCTATCTGGATTTGTCTCTCTTCAGTTATGATGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR CCA 72 bp GGAAGACATGGATGGTCTGTTGTTGCACAGACAAGATaGCCAGGATGTTTTTGTACAAGTACAGCCCTTGGT +
Preference number: 3 (lower is better)
Translates to: GRHGWSVVAQTR*PGCFCTSTALG
Trigger: ACCAAGGGCTGTACTTGTACAAAAACATCCTGGCCATCTTGTCTGTGCAACAACAGACCATCCATGTCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR CCA 72 bp GCCACCACGCCTGGCCTGAAGTCTAAGTTTGAATTCTaGCTCCAGCTTTGTGACTTTCAGAAGATTACTTAC +
Preference number: 3 (lower is better)
Translates to: ATTPGLKSKFEF*LQLCDFQKITY
Trigger: GTAAGTAATCTTCTGAAAGTCACAAAGCTGGAGCCAGAATTCAAACTTAGACTTCAGGCCAGGCGTGGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
3UTR-3UTR CAA 90 bp GGAAGACATGGATGGTCTGTTGTTGCACAGACAAGATGGCCAGGATGTTTTTGTAAAAATTCCATTAGGTaGAGCCACCCTCACTCCTCT +
Preference number: 3 (lower is better)
Translates to: GRHGWSVVAQTRWPGCFCKNSIR*SHPHSS
Trigger: AGAGGAGTGAGGGTGGCTCAACCTAATGGAATTTTT...ACAAAAACATCCTGGCCATCTTGTCTGTGCAACAACAGACCATCCATGTCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CAA 90 bp CTTGTCATCATAACTGAAGAGAGACAAATCCAGATAGGGGCTACCGCTGTAAGAACCAGCAACCGGTGTTaGAGGGAATTGATGAAAGGA +
Preference number: 3 (lower is better)
Translates to: LVIITEERQIQIGATAVRTSNRC*RELMKG
Trigger: TCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGT...TCTTACAGCGGTAGCCCCTATCTGGATTTGTCTCTCTTCAGTTATGATGACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR CCA 72 bp AAGATGGCCAGGATGTTTTTGTACAAGTACAGCCCTTaGTTGTGTGACAAGACCACCTTGTCACACTTGAAC +
Preference number: 3 (lower is better)
Translates to: KMARMFLYKYSP*LCDKTTLSHLN
Trigger: GTTCAAGTGTGACAAGGTGGTCTTGTCACACAACCAAGGGCTGTACTTGTACAAAAACATCCTGGCCATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CAA 90 bp TCACAGTCCTTCCTGGAACCCAAGTACTTGAAAGCATTGAGTATGATAGGAACAATGGCCAGGATGTTTTaGTACAAGTACAGCCCTTGG +
Preference number: 3 (lower is better)
Translates to: SQSFLEPKYLKALSMIGTMARMF*YKYSPW
Trigger: CCAAGGGCTGTACTTGTACAAAAACATCCTGGCCAT...TGTTCCTATCATACTCAATGCTTTCAAGTACTTGGGTTCCAGGAAGGACTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
3UTR-3UTR CAA 90 bp AAAAGCTCATCTGATGTATTCTCAAACACAGCAATCACCTCTGTCGTCACCATAATGGATGGTCTGTTGTaGCACAGACAAGATGGCCAG +
Preference number: 3 (lower is better)
Translates to: KSSSDVFSNTAITSVVTIMDGLL*HRQDGQ
Trigger: CTGGCCATCTTGTCTGTGCAACAACAGACCATCCAT...TATGGTGACGACAGAGGTGATTGCTGTGTTTGAGAATACATCAGATGAGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
3UTR TCA 72 bp TGTGACTTTCAGAAGATTACTTACTTTCTCTGTGCCTaGATTCCTTATCTGTGGTCCCAACCACTCAGGAGG +
Preference number: 3 (lower is better)
Translates to: CDFQKITYFLCA*IPYLWSQPLRR
Trigger: CCTCCTGAGTGGTTGGGACCACAGATAAGGAATTCAGGCACAGAGAAAGTAAGTAATCTTCTGAAAGTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
3UTR-3UTR CAA 90 bp CATATGGAAGTTGACAACATACTCAGCATTAGTCCTCTGCACAGAAATAGCGAAATGGCCAGGATGTTTTaGTACAAGTACAGCCCTTGG +
Preference number: 3 (lower is better)
Translates to: HMEVDNILSISPLHRNSEMARMF*YKYSPW
Trigger: CCAAGGGCTGTACTTGTACAAAAACATCCTGGCCAT...TTCGCTATTTCTGTGCAGAGGACTAATGCTGAGTATGTTGTCAACTTCCATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR-3UTR CAA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGAGTAGTCGGGAGCTTTaGCTTTGGAGTCCACTGAGA +
Preference number: 3 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKSSREL*LWSPLR
Trigger: TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACT...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
3UTR-3UTR CAA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAAAAATTCCATTAGGTaGAGCCACCCTCACTCCTCT +
Preference number: 3 (lower is better)
Translates to: DLINAGHSHRENARGYYNKNSIR*SHPHSS
Trigger: AGAGGAGTGAGGGTGGCTCAACCTAATGGAATTTTT...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
3UTR-3UTR CAA 90 bp AAAAGCTCATCTGATGTATTCTCAAACACAGCAATCACCTCTGTCGTCACCATACGGTGTTTGAGGGAATaGATGAAAGGATCCCTAAAG +
Preference number: 3 (lower is better)
Translates to: KSSSDVFSNTAITSVVTIRCLRE*MKGSLK
Trigger: CTTTAGGGATCCTTTCATCAATTCCCTCAAACACCG...TATGGTGACGACAGAGGTGATTGCTGTGTTTGAGAATACATCAGATGAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
3UTR TCA 72 bp ACATCTTCAACTCTTGGTCATACAACACATTCCCATTaGTCCAACTCCAGTGCTCTTCCACAGTATATTTTT +
Preference number: 3 (lower is better)
Translates to: TSSTLGHTTHSH*SNSSALPQYIF
Trigger: AAAAATATACTGTGGAAGAGCACTGGAGTTGGATCAATGGGAATGTGTTGTATGACCAAGAGTTGAAGATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR CCA 90 bp GGGCGGCCCAATAACCCCGCCTGGATCTCAAACTTGAGCAGGCCCGAGTCCCGGGAGGGGACCGTGGGTTaGGGGTCACTGATTCACTGT +
Preference number: 4 (lower is better)
Translates to: GRPNNPAWISNLSRPESREGTVG*GSLIHC
Trigger: ACAGTGAATCAGTGACCCCCAACCCACGGTCCCCTC...CCGGGACTCGGGCCTGCTCAAGTTTGAGATCCAGGCGGGGTTATTGGGCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp GGAAGAAGCGCCTCTTGGCCATTGCACTACCATCCTGTTCTGCCCGGCGCCACAGTCGCACTGTGTGGTTaGTGGGGCGGCCCAATAACC +
Preference number: 4 (lower is better)
Translates to: GRSASWPLHYHPVLPGATVALCG*WGGPIT
Trigger: GGTTATTGGGCCGCCCCATCAACCACACAGTGCGAC...TGTGGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp GGGCGGCCCAATAACCCCGCCTGGATCTCAAACTTGAGCAGGCCCGAGTCCCGGGGAAGAAGCGCCTCTTaGCCATTGCACTACCATCCT +
Preference number: 4 (lower is better)
Translates to: GRPNNPAWISNLSRPESRGRSAS*PLHYHP
Trigger: AGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCC...CCGGGACTCGGGCCTGCTCAAGTTTGAGATCCAGGCGGGGTTATTGGGCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR GCA 90 bp AAGGCAACAAGGCGTCGCACTGTGTGGTTGATGGGGCGGCCCAATAACCCCGCCGCGCCTCTTGGCCATTaGACTACCATCCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: KATRRRTVWLMGRPNNPAAPLGH*TTILFC
Trigger: GCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGC...GGCGGGGTTATTGGGCCGCCCCATCAACCACACAGTGCGACGCCTTGTTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp TGGAAGAAGCGCCTCTTGGCCATTGCACTACCATCCTGTTCTGCCCGGCGCCACAGCGGCAGTCATCAGTaGAGAGACTACACTCCCGGT +
Preference number: 4 (lower is better)
Translates to: WKKRLLAIALPSCSARRHSGSHQ*RDYTPG
Trigger: ACCGGGAGTGTAGTCTCTTCACTGATGACTGCCGCT...GTGGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp AAGGCAACAAGGCGTCGCACTGTGTGGTTGATGGGGCGGCCCAATAACCCCGCCCAGCCCTTGGTTGTGTaGCAAGACCACCTTGTCACA +
Preference number: 4 (lower is better)
Translates to: KATRRRTVWLMGRPNNPAQPLVV*QDHLVT
Trigger: TGTGACAAGGTGGTCTTGTCACACAACCAAGGGCTG...GGCGGGGTTATTGGGCCGCCCCATCAACCACACAGTGCGACGCCTTGTTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp GGGCGGCCCAATAACCCCGCCTGGATCTCAAACTTGAGCAGGCCCGAGTCCCGGCCTGGAAGACATGGATaGTCTGTTGTTGCACAGACA +
Preference number: 4 (lower is better)
Translates to: GRPNNPAWISNLSRPESRPGRHG*SVVAQT
Trigger: TGTCTGTGCAACAACAGACCATCCATGTCTTCCAGG...CCGGGACTCGGGCCTGCTCAAGTTTGAGATCCAGGCGGGGTTATTGGGCCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp AAGGCAACAAGGCGTCGCACTGTGTGGTTGATGGGGCGGCCCAATAACCCCGCCCCCAATAACCCCGCCTaGATCTCAAACTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: KATRRRTVWLMGRPNNPAPNNPA*ISNLSR
Trigger: CCTGCTCAAGTTTGAGATCCAGGCGGGGTTATTGGG...GGCGGGGTTATTGGGCCGCCCCATCAACCACACAGTGCGACGCCTTGTTGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACGCACTGATGGGGAGCTaGCCCAGCAGCCGGCGTACT +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHALMGS*PSSRRT
Trigger: AGTACGCCGGCTGCTGGGTCAGCTCCCCATCAGTGC...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp AGGCTCAAAAGGGTGAAAGGTGAAGGCAACAAGGCGTCGCACTGTGTGGTTGATGCACTGATGGGGAGCTaGCCCAGCAGCCGGCGTACT +
Preference number: 4 (lower is better)
Translates to: RLKRVKGEGNKASHCVVDALMGS*PSSRRT
Trigger: AGTACGCCGGCTGCTGGGTCAGCTCCCCATCAGTGC...ATCAACCACACAGTGCGACGCCTTGTTGCCTTCACCTTTCACCCTTTTGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp CGAGTCCCGGGCATAGAACCTGATTGGGTGATCTCCACAAGTCTTGGGCCGCTCTGTAAGACTGAGCACTaGTGGGGAGCTGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: RVPGIEPDWVISTSLGPLCKTEH*WGADPA
Trigger: TGCTGGGTCAGCTCCCCATCAGTGCTCAGTCTTACA...GAGCGGCCCAAGACTTGTGGAGATCACCCAATCAGGTTCTATGCCCGGGACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp TGGAAGAAGCGCCTCTTGGCCATTGCACTACCATCCTGTTCTGCCCGGCGCCACCCATGTTTGCCAGGATaGTCTCGATCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: WKKRLLAIALPSCSARRHPCLPG*SRSPDL
Trigger: GAGGTCAGGAGATCGAGACCATCCTGGCAAACATGG...GTGGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR TCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACCTGCCTTGCCTGAACTaGTCCGCCGGCGTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHLPCLN*SAGVPS
Trigger: GCTTGGAACGCCGGCGGATCAGTTCAGGCAAGGCAG...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR TCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACGGTACCTGCCTTGCCTaGACTGATCCGCCGGCGTTC +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHGTCLA*TDPPAF
Trigger: GAACGCCGGCGGATCAGTTCAGGCAAGGCAGGTACC...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR TCA 90 bp AAGAAGCGCCTCTTGGCCATTGCACTACCATCCTGTTCTGCCCGGCGCCACAAAGCCCCGGATATTCACTaGCCGCTGGTCATTGCCATT +
Preference number: 4 (lower is better)
Translates to: KKRLLAIALPSCSARRHKAPDIH*PLVIAI
Trigger: AATGGCAATGACCAGCGGTCAGTGAATATCCGGGGC...TTTGTGGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAGCACTGATGGGGAGCTaGCCCAGCAGCCGGCGTACT +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRALMGS*PSSRRT
Trigger: AGTACGCCGGCTGCTGGGTCAGCTCCCCATCAGTGC...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACCCTGGATCTCAAACTTaGGCAGGCCCGAGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHPGSQT*AGPSPG
Trigger: CCCGGGACTCGGGCCTGCTCAAGTTTGAGATCCAGG...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp CTGTTCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATCTGGTCTGCCTTGCCTaGACTGATCCGCCGGCGTTC +
Preference number: 4 (lower is better)
Translates to: LFCPAPQIYQQPVFEGIDLVCLA*TDPPAF
Trigger: GAACGCCGGCGGATCAGTTCAGGCAAGGCAGACCAG...ATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558413.1
CDS-3UTR GCA 90 bp ACACAGCGGCAGTCATCAGTGAAGAGACTACACTCCCGGTTCAGGTGCTCACCACACTCCCGGTTCAGGTaGTCACCATTGGCCGCAACA +
Preference number: 4 (lower is better)
Translates to: TQRQSSVKRLHSRFRCSPHSRFR*SPLAAT
Trigger: TGTTGCGGCCAATGGTGAGCACCTGAACCGGGAGTG...TGGTGAGCACCTGAACCGGGAGTGTAGTCTCTTCACTGATGACTGCCGCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR CAA 72 bp TGCCGCAGTTGGTCAAAATACTGGAAGAAGCGCCTCTaGGCCATTGCACTACCATCCTGTTCTGCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: CRSWSKYWKKRL*AIALPSCSARR
Trigger: GCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCCAGTATTTTGACCAACTGCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp TCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAACTGCCTTGCCTGAACTaGTCCGCCGGCGTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: SARRHKYTSNRCLRELMKLPCLN*SAGVPS
Trigger: GCTTGGAACGCCGGCGGATCAGTTCAGGCAAGGCAG...TTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558413.1
CDS-3UTR TCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACCAGCTGAGCCCACGATaGCACAGCGGCAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHQLSPR*HSGSHQ
Trigger: CTGATGACTGCCGCTGTGTCATCGTGGGCTCAGCTG...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp AGTGAGCAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAATGGGAGGTAGGCAGCTaGGCCCACGATGACACAGCG +
Preference number: 4 (lower is better)
Translates to: SEQVILIAKAANGPHINEWEVGS*AHDDTA
Trigger: CGCTGTGTCATCGTGGGCTCAGCTGCCTACCTCCCA...TTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTGCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp ATGGCCAGGATGTTTTTGTACAAGTACAGCCCTTGGTTGTGTGACAAGACCACCGCACTGATGGGGAGCTaGCCCAGCAGCCGGCGTACT +
Preference number: 4 (lower is better)
Translates to: MARMFLYKYSPWLCDKTTALMGS*PSSRRT
Trigger: AGTACGCCGGCTGCTGGGTCAGCTCCCCATCAGTGC...GGTGGTCTTGTCACACAACCAAGGGCTGTACTTGTACAAAAACATCCTGGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp AGTGAGCAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAACCTGGATCTCAAACTTaGGCAGGCCCGAGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: SEQVILIAKAANGPHINEPGSQT*AGPSPG
Trigger: CCCGGGACTCGGGCCTGCTCAAGTTTGAGATCCAGG...TTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTGCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp GTCACCTGGAAGACATGGATGGTCTGTTGTTGCACAGACAAGATGGCCAGGATGGTCGCACTGTGTGGTTaGTGGGGCGGCCCAATAACC +
Preference number: 4 (lower is better)
Translates to: VTWKTWMVCCCTDKMARMVALCG*WGGPIT
Trigger: GGTTATTGGGCCGCCCCATCAACCACACAGTGCGAC...CATCCTGGCCATCTTGTCTGTGCAACAACAGACCATCCATGTCTTCCAGGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp AAGAAGCGCCTCTTGGCCATTGCACTACCATCCTGTTCTGCCCGGCGCCACAAACAAAAGGGTGAAAGGTaGAGGCAACAAGGCGTCGCA +
Preference number: 4 (lower is better)
Translates to: KKRLLAIALPSCSARRHKQKGER*RQQGVA
Trigger: TGCGACGCCTTGTTGCCTTCACCTTTCACCCTTTTG...TTTGTGGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp TCCACATTCGCAGCTGCCGCAGTTGGTCAAAATACTGGAAGAAGCGCCTCTTGGATGTCTGGTCTTGCCTaGACTGATCCGCCGGCGTTC +
Preference number: 4 (lower is better)
Translates to: STFAAAAVGQNTGRSASWMSGLA*TDPPAF
Trigger: GAACGCCGGCGGATCAGTTCAGGCAAGACCAGACAT...CCAAGAGGCGCTTCTTCCAGTATTTTGACCAACTGCGGCAGCTGCGAATGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR GCA 90 bp GGAAGAAGCGCCTCTTGGCCATTGCACTACCATCCTGTTCTGCCCGGCGCCACATTCCACATTCGCAGCTaGCGCAGTTGGTCAAAATAC +
Preference number: 4 (lower is better)
Translates to: GRSASWPLHYHPVLPGATFHIRS*RSWSKY
Trigger: GTATTTTGACCAACTGCGGCAGCTGCGAATGTGGAA...TGTGGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR GCA 90 bp CAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAAAGTGCCCAGCAGCCGGCGTACTaGCTCTGTGTGCCCTCCATA +
Preference number: 4 (lower is better)
Translates to: QVILIAKAANGPHINESAQQPAY*LCVPSI
Trigger: TATGGAGGGCACACAGAGGCAGTACGCCGGCTGCTG...GGCACTTTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp CGAGTCCCGGGCATAGAACCTGATTGGGTGATCTCCACAAGTCTTGGGCCGCTCTATCACATCTCTGTCTaGTCCGGGCTCAAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: RVPGIEPDWVISTSLGPLYHISV*SGLKEP
Trigger: TGGCTCTTTGAGCCCGGACCAGACAGAGATGTGATA...GAGCGGCCCAAGACTTGTGGAGATCACCCAATCAGGTTCTATGCCCGGGACTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp GGAAGAAGCGCCTCTTGGCCATTGCACTACCATCCTGTTCTGCCCGGCGCCACACCTGGAAGACATGGATaGTCTGTTGTTGCACAGACA +
Preference number: 4 (lower is better)
Translates to: GRSASWPLHYHPVLPGATPGRHG*SVVAQT
Trigger: TGTCTGTGCAACAACAGACCATCCATGTCTTCCAGG...TGTGGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp AGAGGGGACCGTGGGTTGGGGGTCACTGATTCACTGTTCCGATATACCTCAAAAAGGCGTCGCACTGTGTaGTTGATGGGGCGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: RGDRGLGVTDSLFRYTSKRRRTV*LMGRPN
Trigger: ATTGGGCCGCCCCATCAACCACACAGTGCGACGCCT...TTTTGAGGTATATCGGAACAGTGAATCAGTGACCCCCAACCCACGGTCCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACAGGCGTCGCACTGTGTaGTTGATGGGGCGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHRRRTV*LMGRPN
Trigger: ATTGGGCCGCCCCATCAACCACACAGTGCGACGCCT...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGACAGCTGAGCCCACGATaGCACAGCGGCAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRQLSPR*HSGSHQ
Trigger: CTGATGACTGCCGCTGTGTCATCGTGGGCTCAGCTG...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GAGCAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAAAGTCAGCTGAGCCCACGATaGCACAGCGGCAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: EQVILIAKAANGPHINESQLSPR*HSGSHQ
Trigger: CTGATGACTGCCGCTGTGTCATCGTGGGCTCAGCTG...ACTTTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp CAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAAAGTGCCTTGGCCATGCCTGTCTaGCTGTCCCGCTGTACCTCA +
Preference number: 4 (lower is better)
Translates to: QVILIAKAANGPHINESALAMPV*LSRCTS
Trigger: TGAGGTACAGCGGGACAGTCAGACAGGCATGGCCAA...GGCACTTTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR TCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAGTCGCACTGTGTGGTTaGTGGGGCGGCCCAATAACC +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRVALCG*WGGPIT
Trigger: GGTTATTGGGCCGCCCCATCAACCACACAGTGCGAC...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACCACTCCCGGTTCAGGTaGTCACCATTGGCCGCAACA +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHHSRFR*SPLAAT
Trigger: TGTTGCGGCCAATGGTGAGCACCTGAACCGGGAGTG...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGACAGCAGCCGGCGTACTaGCTCTGTGTGCCCTCCATA +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRQQPAY*LCVPSI
Trigger: TATGGAGGGCACACAGAGGCAGTACGCCGGCTGCTG...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAAGGCGTCGCACTGTGTaGTTGATGGGGCGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRRRRTV*LMGRPN
Trigger: ATTGGGCCGCCCCATCAACCACACAGTGCGACGCCT...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp GAGCAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAAAGTAGGCGTCGCACTGTGTaGTTGATGGGGCGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: EQVILIAKAANGPHINESRRRTV*LMGRPN
Trigger: ATTGGGCCGCCCCATCAACCACACAGTGCGACGCCT...ACTTTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp AAGGCAACAAGGCGTCGCACTGTGTGGTTGATGGGGCGGCCCAATAACCCCGCCCAGCAGTGTCGCATATaGAAGTTGACAACATACTCA +
Preference number: 4 (lower is better)
Translates to: KATRRRTVWLMGRPNNPAQQCRI*KLTTYS
Trigger: TGAGTATGTTGTCAACTTCCATATGCGACACTGCTG...GGCGGGGTTATTGGGCCGCCCCATCAACCACACAGTGCGACGCCTTGTTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACAGCGGCAGTCATCAGTaGAGAGACTACACTCCCGGT +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHSGSHQ*RDYTPG
Trigger: ACCGGGAGTGTAGTCTCTTCACTGATGACTGCCGCT...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp CTTGGAAGACCAGATAATCTGGCTCTGGTGAGGCACCTACGTGCAGCAGTGTCGTGGGTTGGGGGTCACTaGTTCACTGTTCCGATATAC +
Preference number: 4 (lower is better)
Translates to: LGRPDNLALVRHLRAAVSWVGGH*FTVPIY
Trigger: GTATATCGGAACAGTGAATCAGTGACCCCCAACCCA...CGACACTGCTGCACGTAGGTGCCTCACCAGAGCCAGATTATCTGGTCTTCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp TTCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAATTGGCCATGCCTGTCTaGCTGTCCCGCTGTACCTCA +
Preference number: 4 (lower is better)
Translates to: FCPAPQIYQQPVFEGIDELAMPV*LSRCTS
Trigger: TGAGGTACAGCGGGACAGTCAGACAGGCATGGCCAA...TTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR TCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGTAAGACTGAGCACTaGTGGGGAGCTGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHCKTEH*WGADPA
Trigger: TGCTGGGTCAGCTCCCCATCAGTGCTCAGTCTTACA...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GTCACCTGGAAGACATGGATGGTCTGTTGTTGCACAGACAAGATGGCCAGGATGCCCGGGCATAGAACCTaGTTGGGTGATCTCCACAAG +
Preference number: 4 (lower is better)
Translates to: VTWKTWMVCCCTDKMARMPGHRT*LGDLHK
Trigger: CTTGTGGAGATCACCCAATCAGGTTCTATGCCCGGG...CATCCTGGCCATCTTGTCTGTGCAACAACAGACCATCCATGTCTTCCAGGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp GGAAGACATGGATGGTCTGTTGTTGCACAGACAAGATGGCCAGGATGTTTTTGTCCTGGATCTCAAACTTaGGCAGGCCCGAGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: GRHGWSVVAQTRWPGCFCPGSQT*AGPSPG
Trigger: CCCGGGACTCGGGCCTGCTCAAGTTTGAGATCCAGG...ACAAAAACATCCTGGCCATCTTGTCTGTGCAACAACAGACCATCCATGTCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACATAATCTGGCTCTGGTaGGGCACCTACGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHIIWLW*GTYVQQ
Trigger: CTGCTGCACGTAGGTGCCTCACCAGAGCCAGATTAT...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GTCACCTGGAAGACATGGATGGTCTGTTGTTGCACAGACAAGATGGCCAGGATGTGGCTCTCTCCCATCTaGGGTATAGCAGGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: VTWKTWMVCCCTDKMARMWLSPI*GIAGWN
Trigger: GTTCCAGCCTGCTATACCTCAGATGGGAGAGAGCCA...CATCCTGGCCATCTTGTCTGTGCAACAACAGACCATCCATGTCTTCCAGGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAATGTCTGGTCTTGCCTaGACTGATCCGCCGGCGTTC +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRMSGLA*TDPPAF
Trigger: GAACGCCGGCGGATCAGTTCAGGCAAGACCAGACAT...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR GCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACAACACTCGGACTTGGTaGCAGTGGGTACCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHNTRTW*QWVPAL
Trigger: CAAGGCAGGTACCCACTGGCACCAAGTCCGAGTGTT...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR GCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGACACTCCCGGTTCAGGTaGTCACCATTGGCCGCAACA +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRHSRFR*SPLAAT
Trigger: TGTTGCGGCCAATGGTGAGCACCTGAACCGGGAGTG...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACGCGCCTCTTGGCCATTaGACTACCATCCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHAPLGH*TTILFC
Trigger: GCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGC...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp ACGCCTGGCCTGAAGTCTAAGTTTGAATTCTGGCTCCAGCTTTGTGACTTTCAGCAGCAGCCGGCGTACTaGCTCTGTGTGCCCTCCATA +
Preference number: 4 (lower is better)
Translates to: TPGLKSKFEFWLQLCDFQQQPAY*LCVPSI
Trigger: TATGGAGGGCACACAGAGGCAGTACGCCGGCTGCTG...CTGAAAGTCACAAAGCTGGAGCCAGAATTCAAACTTAGACTTCAGGCCAGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR GCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACGGTGAGGCACCTACGTaGAGCAGTGTCGCATATGGA +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHGEAPT*SSVAYG
Trigger: TCCATATGCGACACTGCTGCACGTAGGTGCCTCACC...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp AGAGGGGACCGTGGGTTGGGGGTCACTGATTCACTGTTCCGATATACCTCAAAACCCAGGAACAGCTGCTaGATCCATGGCCTCTCATCT +
Preference number: 4 (lower is better)
Translates to: RGDRGLGVTDSLFRYTSKPRNSC*IHGLSS
Trigger: AGATGAGAGGCCATGGATGCAGCAGCTGTTCCTGGG...TTTTGAGGTATATCGGAACAGTGAATCAGTGACCCCCAACCCACGGTCCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR CCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGACGGACTTGGTGCCAGTaGGTACCTGCCTTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRRTWCQ*VPALPE
Trigger: TTCAGGCAAGGCAGGTACCCACTGGCACCAAGTCCG...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR CCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGATGGAACACTCGGACTTaGTGCCAGTGGGTACCTGCC +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRWNTRT*CQWVPA
Trigger: GGCAGGTACCCACTGGCACCAAGTCCGAGTGTTCCA...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR CCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAGAGGGGACCGTGGGTTaGGGGTCACTGATTCACTGT +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLREGTVG*GSLIHC
Trigger: ACAGTGAATCAGTGACCCCCAACCCACGGTCCCCTC...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp TTCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAGAGGGGACCGTGGGTTaGGGGTCACTGATTCACTGT +
Preference number: 4 (lower is better)
Translates to: FCPAPQIYQQPVFEGIDEEGTVG*GSLIHC
Trigger: ACAGTGAATCAGTGACCCCCAACCCACGGTCCCCTC...TTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp ACACAGCGGCAGTCATCAGTGAAGAGACTACACTCCCGGTTCAGGTGCTCACCACGCAGCTGCCGCAGTTaGTCAAAATACTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: TQRQSSVKRLHSRFRCSPRSCRS*SKYWKK
Trigger: CTTCTTCCAGTATTTTGACCAACTGCGGCAGCTGCG...TGGTGAGCACCTGAACCGGGAGTGTAGTCTCTTCACTGATGACTGCCGCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR CAA 72 bp GTTGGTCAAAATACTGGAAGAAGCGCCTCTTGGCCATaGCACTACCATCCTGTTCTGCCCGGCGCCACAAAT +
Preference number: 4 (lower is better)
Translates to: VGQNTGRSASWP*HYHPVLPGATN
Trigger: ATTTGTGGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCCAGTATTTTGACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAGCCCCGGATATTCACTaGCCGCTGGTCATTGCCATT +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRAPDIH*PLVIAI
Trigger: AATGGCAATGACCAGCGGTCAGTGAATATCCGGGGC...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp TTCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAGCCCCGGATATTCACTaGCCGCTGGTCATTGCCATT +
Preference number: 4 (lower is better)
Translates to: FCPAPQIYQQPVFEGIDEAPDIH*PLVIAI
Trigger: AATGGCAATGACCAGCGGTCAGTGAATATCCGGGGC...TTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR TCA 90 bp CGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAAGGATCCAGCGGCAGTCATCAGTaGAGAGACTACACTCCCGGT +
Preference number: 4 (lower is better)
Translates to: RRHKYTSNRCLRELMKGSSGSHQ*RDYTPG
Trigger: ACCGGGAGTGTAGTCTCTTCACTGATGACTGCCGCT...GGATCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAAGCGGCAGTCATCAGTaGAGAGACTACACTCCCGGT +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRSGSHQ*RDYTPG
Trigger: ACCGGGAGTGTAGTCTCTTCACTGATGACTGCCGCT...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCTGGGAGGTAGGCAGCTaGGCCCACGATGACACAGCG +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSWEVGS*AHDDTA
Trigger: CGCTGTGTCATCGTGGGCTCAGCTGCCTACCTCCCA...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GAAGTTGACAACATACTCAGCATTAGTCCTCTGCACAGAAATAGCGAAAGGCTCTGGGAGGTAGGCAGCTaGGCCCACGATGACACAGCG +
Preference number: 4 (lower is better)
Translates to: EVDNILSISPLHRNSERLWEVGS*AHDDTA
Trigger: CGCTGTGTCATCGTGGGCTCAGCTGCCTACCTCCCA...GAGCCTTTCGCTATTTCTGTGCAGAGGACTAATGCTGAGTATGTTGTCAACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACCAGCCCTTGGTTGTGTaGCAAGACCACCTTGTCACA +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHQPLVV*QDHLVT
Trigger: TGTGACAAGGTGGTCTTGTCACACAACCAAGGGCTG...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GAGCAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAAAGTTGTAAGACTGAGCACTaGTGGGGAGCTGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: EQVILIAKAANGPHINESCKTEH*WGADPA
Trigger: TGCTGGGTCAGCTCCCCATCAGTGCTCAGTCTTACA...ACTTTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTCTTGGGCCGCTCCATaGCAGATACCCACTTGTCAT +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHSWAAP*QIPTCH
Trigger: ATGACAAGTGGGTATCTGTCATGGAGCGGCCCAAGA...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp CTGTTCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATTCTTGGGCCGCTCCATaGCAGATACCCACTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LFCPAPQIYQQPVFEGIDSWAAP*QIPTCH
Trigger: ATGACAAGTGGGTATCTGTCATGGAGCGGCCCAAGA...ATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp TCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAAATAATCTGGCTCTGGTaGGGCACCTACGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SARRHKYTSNRCLRELMKIIWLW*GTYVQQ
Trigger: CTGCTGCACGTAGGTGCCTCACCAGAGCCAGATTAT...TTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp TCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAATGGCTCTCTCCCATCTaGGGTATAGCAGGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SARRHKYTSNRCLRELMKWLSPI*GIAGWN
Trigger: GTTCCAGCCTGCTATACCTCAGATGGGAGAGAGCCA...TTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGATGGCTCTCTCCCATCTaGGGTATAGCAGGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRWLSPI*GIAGWN
Trigger: GTTCCAGCCTGCTATACCTCAGATGGGAGAGAGCCA...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGATCTCCTTCGTATCCCTaGAGTAGGTCCTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRSPSYP*SRSSAA
Trigger: GGCAGCAGAGGACCTACTGCAGGGATACGAAGGAGA...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp GGCATAGAACCTGATTGGGTGATCTCCACAAGTCTTGGGCCGCTCCATGACAGACTGACCGCTGGTCATTaGCATTGGACAGGATTTCTC +
Preference number: 4 (lower is better)
Translates to: GIEPDWVISTSLGPLHDRLTAGH*HWTGFL
Trigger: GAGAAATCCTGTCCAATGGCAATGACCAGCGGTCAG...TCTGTCATGGAGCGGCCCAAGACTTGTGGAGATCACCCAATCAGGTTCTATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR GCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAGGTGAGGCACCTACGTaGAGCAGTGTCGCATATGGA +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRGEAPT*SSVAYG
Trigger: TCCATATGCGACACTGCTGCACGTAGGTGCCTCACC...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp GAGCAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAAAGTGGTGAGGCACCTACGTaGAGCAGTGTCGCATATGGA +
Preference number: 4 (lower is better)
Translates to: EQVILIAKAANGPHINESGEAPT*SSVAYG
Trigger: TCCATATGCGACACTGCTGCACGTAGGTGCCTCACC...ACTTTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR GCA 90 bp TCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAAGGTGAGGCACCTACGTaGAGCAGTGTCGCATATGGA +
Preference number: 4 (lower is better)
Translates to: SARRHKYTSNRCLRELMKGEAPT*SSVAYG
Trigger: TCCATATGCGACACTGCTGCACGTAGGTGCCTCACC...TTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACCCCAATAACCCCGCCTaGATCTCAAACTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHPNNPA*ISNLSR
Trigger: CCTGCTCAAGTTTGAGATCCAGGCGGGGTTATTGGG...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp CGAGTCCCGGGCATAGAACCTGATTGGGTGATCTCCACAAGTCTTGGGCCGCTCCAGCAGTGTCGCATATaGAAGTTGACAACATACTCA +
Preference number: 4 (lower is better)
Translates to: RVPGIEPDWVISTSLGPLQQCRI*KLTTYS
Trigger: TGAGTATGTTGTCAACTTCCATATGCGACACTGCTG...GAGCGGCCCAAGACTTGTGGAGATCACCCAATCAGGTTCTATGCCCGGGACTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp CTGTTCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATCGGCGTTCCAAGCGGTaGATGACATTTTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: LFCPAPQIYQQPVFEGIDRRSKR*MTFWFW
Trigger: CCAAAACCAAAATGTCATTCACCGCTTGGAACGCCG...ATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR TCA 90 bp CAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAAAGTGCCCGGCGTTCCAAGCGGTaGATGACATTTTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: QVILIAKAANGPHINESARRSKR*MTFWFW
Trigger: CCAAAACCAAAATGTCATTCACCGCTTGGAACGCCG...GGCACTTTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR TCA 90 bp TCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAACATAAGCGGCCGGTGTaGAGGTCAATGATATGGAGG +
Preference number: 4 (lower is better)
Translates to: SARRHKYTSNRCLRELMKHKRPV*RSMIWR
Trigger: CCTCCATATCATTGACCTTCACACCGGCCGCTTATG...TTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp CGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAAGGATCCCATAAGCGGCCGGTGTaGAGGTCAATGATATGGAGG +
Preference number: 4 (lower is better)
Translates to: RRHKYTSNRCLRELMKGSHKRPV*RSMIWR
Trigger: CCTCCATATCATTGACCTTCACACCGGCCGCTTATG...GGATCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGACATAAGCGGCCGGTGTaGAGGTCAATGATATGGAGG +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRHKRPV*RSMIWR
Trigger: CCTCCATATCATTGACCTTCACACCGGCCGCTTATG...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGACAGCCCTTGGTTGTGTaGCAAGACCACCTTGTCACA +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRQPLVV*QDHLVT
Trigger: TGTGACAAGGTGGTCTTGTCACACAACCAAGGGCTG...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGGTCCGCACATCAATaGAAGTGCCTTCAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHWSAHQ*KCLQES
Trigger: TGACTCCTGAAGGCACTTTCATTGATGTGCGGACCA...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACAAACAGCTGACACAGTaGGCAGGTCATCCTCATAGC +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHKQLTQ*AGHPHS
Trigger: GCTATGAGGATGACCTGCTCACTGTGTCAGCTGTTT...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp CCAGATAATCTGGCTCTGGTGAGGCACCTACGTGCAGCAGTGTCGCATATGGAACCTGTGATGGATCTGTaGCTCGCAGTGTTACTACAT +
Preference number: 4 (lower is better)
Translates to: PDNLALVRHLRAAVSHMEPVMDL*LAVLLH
Trigger: ATGTAGTAACACTGCGAGTCACAGATCCATCACAGG...TTCCATATGCGACACTGCTGCACGTAGGTGCCTCACCAGAGCCAGATTATCTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACGCACTGATGGGGAGCTaGCCCAGCAGCCGGCGTACT +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNALMGS*PSSRRT
Trigger: AGTACGCCGGCTGCTGGGTCAGCTCCCCATCAGTGC...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GGAAGAAGCGCCTCTTGGCCATTGCACTACCATCCTGTTCTGCCCGGCGCCACAACTTGTCATCATAACTaGAGAGAGACAAATCCAGAT +
Preference number: 4 (lower is better)
Translates to: GRSASWPLHYHPVLPGATTCHHN*RETNPD
Trigger: ATCTGGATTTGTCTCTCTTCAGTTATGATGACAAGT...TGTGGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp CGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAAGGATCCTCTTGGGCCGCTCCATaGCAGATACCCACTTGTCAT +
Preference number: 4 (lower is better)
Translates to: RRHKYTSNRCLRELMKGSSWAAP*QIPTCH
Trigger: ATGACAAGTGGGTATCTGTCATGGAGCGGCCCAAGA...GGATCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCGTCGCACTGTGTGGTTaGTGGGGCGGCCCAATAACC +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSVALCG*WGGPIT
Trigger: GGTTATTGGGCCGCCCCATCAACCACACAGTGCGAC...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGACAAAAGGGTGAAAGGTaGAGGCAACAAGGCGTCGCA +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRQKGER*RQQGVA
Trigger: TGCGACGCCTTGTTGCCTTCACCTTTCACCCTTTTG...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GAAGTTGACAACATACTCAGCATTAGTCCTCTGCACAGAAATAGCGAAAGGCTCTGGTCTTGCCTGAACTaGTCCGCCGGCGTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: EVDNILSISPLHRNSERLWSCLN*SAGVPS
Trigger: GCTTGGAACGCCGGCGGATCAGTTCAGGCAAGACCA...GAGCCTTTCGCTATTTCTGTGCAGAGGACTAATGCTGAGTATGTTGTCAACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp CTGGGCCTCTCCTTGAAACATCTTCAACTCTTGGTCATACAACACATTCCCATTTGGTCTTGCCTGAACTaGTCCGCCGGCGTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: LGLSLKHLQLLVIQHIPIWSCLN*SAGVPS
Trigger: GCTTGGAACGCCGGCGGATCAGTTCAGGCAAGACCA...AATGGGAATGTGTTGTATGACCAAGAGTTGAAGATGTTTCAAGGAGAGGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR TCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGCTGGGCCTCTCCTTaGAACATCTTCAACTCTTGG +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHCWASP*NIFNSW
Trigger: CCAAGAGTTGAAGATGTTTCAAGGAGAGGCCCAGCA...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR GCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACATGCCCCAGGACTCCTaGACCCGCGGCTGCACGTTC +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNMPQDS*TRGCTF
Trigger: GAACGTGCAGCCGCGGGTGCAGGAGTCCTGGGGCAT...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268148.13
ENST00000557837.1
CDS-3UTR GCA 90 bp CATATGGAAGTTGACAACATACTCAGCATTAGTCCTCTGCACAGAAATAGCGAAATGCCCCAGGACTCCTaGACCCGCGGCTGCACGTTC +
Preference number: 4 (lower is better)
Translates to: HMEVDNILSISPLHRNSEMPQDS*TRGCTF
Trigger: GAACGTGCAGCCGCGGGTGCAGGAGTCCTGGGGCAT...TTCGCTATTTCTGTGCAGAGGACTAATGCTGAGTATGTTGTCAACTTCCATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557837.1
CDS-3UTR GCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACACTACCATCCTGTTCTaGCCGGCGCCACAAATATAC +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHTTILF*PAPQIY
Trigger: GTATATTTGTGGCGCCGGGCAGAACAGGATGGTAGT...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACCGTACTGCCTCTGTGTaGCCTCCATACTTGGCATTT +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHRTASV*PPYLAF
Trigger: AAATGCCAAGTATGGAGGGCACACAGAGGCAGTACG...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp GGCATAGAACCTGATTGGGTGATCTCCACAAGTCTTGGGCCGCTCCATGACAGAATATTCACTGACCGCTaGTCATTGCCATTGGACAGG +
Preference number: 4 (lower is better)
Translates to: GIEPDWVISTSLGPLHDRIFTDR*SLPLDR
Trigger: CCTGTCCAATGGCAATGACCAGCGGTCAGTGAATAT...TCTGTCATGGAGCGGCCCAAGACTTGTGGAGATCACCCAATCAGGTTCTATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACCCTTCAGGAGTCACCTaGAAGACATGGATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHPSGVT*KTWMVC
Trigger: ACAGACCATCCATGTCTTCCAGGTGACTCCTGAAGG...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAGGAAGAAGCGCCTCTTaGCCATTGCACTACCATCCT +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRGRSAS*PLHYHP
Trigger: AGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCC...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACCGCAGCTGCCGCAGTTaGTCAAAATACTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHRSCRS*SKYWKK
Trigger: CTTCTTCCAGTATTTTGACCAACTGCGGCAGCTGCG...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
3UTR CAA 72 bp GTGAAGAGACTACACTCCCGGTTCAGGTGCTCACCATaGGCCGCAACATTGGTAATGTGCAGCAGGACAAAA +
Preference number: 4 (lower is better)
Translates to: VKRLHSRFRCSP*AATLVMCSRTK
Trigger: TTTTGTCCTGCTGCACATTACCAATGTTGCGGCCAATGGTGAGCACCTGAACCGGGAGTGTAGTCTCTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR CAA 72 bp CAGAAGCTGCATTTTCCACATTCGCAGCTGCCGCAGTaGGTCAAAATACTGGAAGAAGCGCCTCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: QKLHFPHSQLPQ*VKILEEAPLGH
Trigger: ATGGCCAAGAGGCGCTTCTTCCAGTATTTTGACCAACTGCGGCAGCTGCGAATGTGGAAAATGCAGCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp AGTGAGCAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAACGGCGTTCCAAGCGGTaGATGACATTTTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SEQVILIAKAANGPHINERRSKR*MTFWFW
Trigger: CCAAAACCAAAATGTCATTCACCGCTTGGAACGCCG...TTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTGCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR TCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGACGGCGTTCCAAGCGGTaGATGACATTTTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRRRSKR*MTFWFW
Trigger: CCAAAACCAAAATGTCATTCACCGCTTGGAACGCCG...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACCTGCCTTGCCTGAACTaGTCCGCCGGCGTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNLPCLN*SAGVPS
Trigger: GCTTGGAACGCCGGCGGATCAGTTCAGGCAAGGCAG...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR TCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACGGTACCTGCCTTGCCTaGACTGATCCGCCGGCGTTC +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNGTCLA*TDPPAF
Trigger: GAACGCCGGCGGATCAGTTCAGGCAAGGCAGGTACC...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR TCA 90 bp TCACAGTCCTTCCTGGAACCCAAGTACTTGAAAGCATTGAGTATGATAGGAACACAGCTGAGCCCACGATaGCACAGCGGCAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: SQSFLEPKYLKALSMIGTQLSPR*HSGSHQ
Trigger: CTGATGACTGCCGCTGTGTCATCGTGGGCTCAGCTG...TGTTCCTATCATACTCAATGCTTTCAAGTACTTGGGTTCCAGGAAGGACTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR TCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACTGGGAGGTAGGCAGCTaGGCCCACGATGACACAGCG +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNWEVGS*AHDDTA
Trigger: CGCTGTGTCATCGTGGGCTCAGCTGCCTACCTCCCA...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGATGGGTTGGGGGTCACTaGTTCACTGTTCCGATATAC +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRWVGGH*FTVPIY
Trigger: GTATATCGGAACAGTGAATCAGTGACCCCCAACCCA...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GGCATAGAACCTGATTGGGTGATCTCCACAAGTCTTGGGCCGCTCCATGACAGACGGTGTGAAGGTCAATaGTATGGAGGGAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: GIEPDWVISTSLGPLHDRRCEGQ*YGGNSL
Trigger: AAGACTATTCCCTCCATATCATTGACCTTCACACCG...TCTGTCATGGAGCGGCCCAAGACTTGTGGAGATCACCCAATCAGGTTCTATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp TTCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAATGGTCCGCACATCAATaGAAGTGCCTTCAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: FCPAPQIYQQPVFEGIDEWSAHQ*KCLQES
Trigger: TGACTCCTGAAGGCACTTTCATTGATGTGCGGACCA...TTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR TCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAAAACAGCTGACACAGTaGGCAGGTCATCCTCATAGC +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRKQLTQ*AGHPHS
Trigger: GCTATGAGGATGACCTGCTCACTGTGTCAGCTGTTT...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp TTCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAAAACAGCTGACACAGTaGGCAGGTCATCCTCATAGC +
Preference number: 4 (lower is better)
Translates to: FCPAPQIYQQPVFEGIDEKQLTQ*AGHPHS
Trigger: GCTATGAGGATGACCTGCTCACTGTGTCAGCTGTTT...TTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR TCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCTTGGCCATGCCTGTCTaGCTGTCCCGCTGTACCTCA +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSLAMPV*LSRCTS
Trigger: TGAGGTACAGCGGGACAGTCAGACAGGCATGGCCAA...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp AGGCTCAAAAGGGTGAAAGGTGAAGGCAACAAGGCGTCGCACTGTGTGGTTGATCCTGTGATGGATCTGTaGCTCGCAGTGTTACTACAT +
Preference number: 4 (lower is better)
Translates to: RLKRVKGEGNKASHCVVDPVMDL*LAVLLH
Trigger: ATGTAGTAACACTGCGAGTCACAGATCCATCACAGG...ATCAACCACACAGTGCGACGCCTTGTTGCCTTCACCTTTCACCCTTTTGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp GGAAGACATGGATGGTCTGTTGTTGCACAGACAAGATGGCCAGGATGTTTTTGTCCCGGGCATAGAACCTaGTTGGGTGATCTCCACAAG +
Preference number: 4 (lower is better)
Translates to: GRHGWSVVAQTRWPGCFCPGHRT*LGDLHK
Trigger: CTTGTGGAGATCACCCAATCAGGTTCTATGCCCGGG...ACAAAAACATCCTGGCCATCTTGTCTGTGCAACAACAGACCATCCATGTCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACAAAGGCTCAAAAGGGTaGAAGGTGAAGGCAACAAGG +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHKGSKG*KVKATR
Trigger: CCTTGTTGCCTTCACCTTTCACCCTTTTGAGCCTTT...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp AGAGGGGACCGTGGGTTGGGGGTCACTGATTCACTGTTCCGATATACCTCAAAAAAAGGCTCAAAAGGGTaGAAGGTGAAGGCAACAAGG +
Preference number: 4 (lower is better)
Translates to: RGDRGLGVTDSLFRYTSKKGSKG*KVKATR
Trigger: CCTTGTTGCCTTCACCTTTCACCCTTTTGAGCCTTT...TTTTGAGGTATATCGGAACAGTGAATCAGTGACCCCCAACCCACGGTCCCCTCT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACAAAATTCCATTAGGTTaGGCCACCCTCACTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHKIPLG*ATLTPL
Trigger: GAGAGGAGTGAGGGTGGCTCAACCTAATGGAATTTT...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GAGCAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAAAGTGTGTCTTTGAACCTGTaGTGGATCTGTGACTCGCAG +
Preference number: 4 (lower is better)
Translates to: EQVILIAKAANGPHINESVSLNL*WICDSQ
Trigger: CTGCGAGTCACAGATCCATCACAGGTTCAAAGACAC...ACTTTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557837.1
CDS-3UTR TCA 90 bp AGTGAGCAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAACCACCACGCCTGGCCTaGAGTCTAAGTTTGAATTCT +
Preference number: 4 (lower is better)
Translates to: SEQVILIAKAANGPHINEPPRLA*SLSLNS
Trigger: AGAATTCAAACTTAGACTTCAGGCCAGGCGTGGTGG...TTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTGCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR GCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGACTGACCGCTGGTCATTaGCATTGGACAGGATTTCTC +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRLTAGH*HWTGFL
Trigger: GAGAAATCCTGTCCAATGGCAATGACCAGCGGTCAG...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGATGGATGGTCTGTTGTTaGACAGACAAGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRWMVCC*TDKMAR
Trigger: CCTGGCCATCTTGTCTGTGCAACAACAGACCATCCA...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAACTACCATCCTGTTCTaGCCGGCGCCACAAATATAC +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRTTILF*PAPQIY
Trigger: GTATATTTGTGGCGCCGGGCAGAACAGGATGGTAGT...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTTCCACATTCGCAGCTaGCGCAGTTGGTCAAAATAC +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHFHIRS*RSWSKY
Trigger: GTATTTTGACCAACTGCGGCAGCTGCGAATGTGGAA...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp CTGTTCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGCGCTGGATCTGCCTTaGAAAATTGTTGCTAGAAGC +
Preference number: 4 (lower is better)
Translates to: LFCPAPQIYQQPVFEGIDALDLP*KIVARS
Trigger: GCTTCTAGCAACAATTTTGCAAGGCAGATCCAGCGC...ATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR GCA 90 bp CGAGTCCCGGGCATAGAACCTGATTGGGTGATCTCCACAAGTCTTGGGCCGCTCTTGATCCAACTCCAGTaGTCTTCCACAGTATATTTT +
Preference number: 4 (lower is better)
Translates to: RVPGIEPDWVISTSLGPLLIQLQ*SSTVYF
Trigger: AAAATATACTGTGGAAGAGCACTGGAGTTGGATCAA...GAGCGGCCCAAGACTTGTGGAGATCACCCAATCAGGTTCTATGCCCGGGACTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR CCA 90 bp CGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAAGGATCCTATCACATCTCTGTCTaGTCCGGGCTCAAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: RRHKYTSNRCLRELMKGSYHISV*SGLKEP
Trigger: TGGCTCTTTGAGCCCGGACCAGACAGAGATGTGATA...GGATCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR CCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCTGGAACACTCGGACTTaGTGCCAGTGGGTACCTGCC +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSWNTRT*CQWVPA
Trigger: GGCAGGTACCCACTGGCACCAAGTCCGAGTGTTCCA...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR CCA 90 bp CTGTTCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGCTGGTCATTGCCATTaGACAGGATTTCTCCTTCGT +
Preference number: 4 (lower is better)
Translates to: LFCPAPQIYQQPVFEGIDAGHCH*TGFLLR
Trigger: ACGAAGGAGAAATCCTGTCCAATGGCAATGACCAGC...ATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR CCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCGAGGGGACCGTGGGTTaGGGGTCACTGATTCACTGT +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSEGTVG*GSLIHC
Trigger: ACAGTGAATCAGTGACCCCCAACCCACGGTCCCCTC...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTACAAGTACAGCCCTTaGTTGTGTGACAAGACCACC +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHYKYSP*LCDKTT
Trigger: GGTGGTCTTGTCACACAACCAAGGGCTGTACTTGTA...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACCCTGGAAGACATGGATaGTCTGTTGTTGCACAGACA +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHPGRHG*SVVAQT
Trigger: TGTCTGTGCAACAACAGACCATCCATGTCTTCCAGG...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp CCAGATAATCTGGCTCTGGTGAGGCACCTACGTGCAGCAGTGTCGCATATGGAAGTTCCAAGCGGTGAATaGCATTTTGGTTTTGGATTC +
Preference number: 4 (lower is better)
Translates to: PDNLALVRHLRAAVSHMEVPSGE*HFGFGF
Trigger: GAATCCAAAACCAAAATGTCATTCACCGCTTGGAAC...TTCCATATGCGACACTGCTGCACGTAGGTGCCTCACCAGAGCCAGATTATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCGCCCCGGATATTCACTaGCCGCTGGTCATTGCCATT +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSAPDIH*PLVIAI
Trigger: AATGGCAATGACCAGCGGTCAGTGAATATCCGGGGC...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACCAGCTGAGCCCACGATaGCACAGCGGCAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNQLSPR*HSGSHQ
Trigger: CTGATGACTGCCGCTGTGTCATCGTGGGCTCAGCTG...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGACCACCTTGTCACACTTaGACGTGCGTGTATCACATA +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRPPCHT*TCVYHI
Trigger: TATGTGATACACGCACGTTCAAGTGTGACAAGGTGG...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp CGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAAGGATCCCCACCTTGTCACACTTaGACGTGCGTGTATCACATA +
Preference number: 4 (lower is better)
Translates to: RRHKYTSNRCLRELMKGSPPCHT*TCVYHI
Trigger: TATGTGATACACGCACGTTCAAGTGTGACAAGGTGG...GGATCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp GCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAAGGATCCCTTGGTCCGCACATCAATaGAAGTGCCTTCAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: APQIYQQPVFEGIDERIPWSAHQ*KCLQES
Trigger: TGACTCCTGAAGGCACTTTCATTGATGTGCGGACCA...AGGGATCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR TCA 90 bp ATGGCCAGGATGTTTTTGTACAAGTACAGCCCTTGGTTGTGTGACAAGACCACCAAACAGCTGACACAGTaGGCAGGTCATCCTCATAGC +
Preference number: 4 (lower is better)
Translates to: MARMFLYKYSPWLCDKTTKQLTQ*AGHPHS
Trigger: GCTATGAGGATGACCTGCTCACTGTGTCAGCTGTTT...GGTGGTCTTGTCACACAACCAAGGGCTGTACTTGTACAAAAACATCCTGGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAAAAGAAAGATGCCTGTaGTGGATCTGTGACTCGCAG +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRKERCL*WICDSQ
Trigger: CTGCGAGTCACAGATCCATCACAGGCATCTTTCTTT...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACATTGTTGCTAGAAGCTaGGCAGGGAAACTGAACTTC +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHIVARS*AGKLNF
Trigger: GAAGTTCAGTTTCCCTGCTCAGCTTCTAGCAACAAT...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCCCCGGGCATAGAACCTaGTTGGGTGATCTCCACAAG +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSPGHRT*LGDLHK
Trigger: CTTGTGGAGATCACCCAATCAGGTTCTATGCCCGGG...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAAAAGGCTCAAAAGGGTaGAAGGTGAAGGCAACAAGG +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRKGSKG*KVKATR
Trigger: CCTTGTTGCCTTCACCTTTCACCCTTTTGAGCCTTT...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp AGCTCCAAAAGCTCATCTGATGTATTCTCAAACACAGCAATCACCTCTGTCGTCATAATCTGGCTCTGGTaGGGCACCTACGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSKSSSDVFSNTAITSVVIIWLW*GTYVQQ
Trigger: CTGCTGCACGTAGGTGCCTCACCAGAGCCAGATTAT...GACGACAGAGGTGATTGCTGTGTTTGAGAATACATCAGATGAGCTTTTGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR TCA 90 bp CTTGGAAGACCAGATAATCTGGCTCTGGTGAGGCACCTACGTGCAGCAGTGTCGATAATGCCGAAGAAGTaGCATGAAGGGGATAAAAGT +
Preference number: 4 (lower is better)
Translates to: LGRPDNLALVRHLRAAVSIMPKK*HEGDKS
Trigger: ACTTTTATCCCCTTCATGTCACTTCTTCGGCATTAT...CGACACTGCTGCACGTAGGTGCCTCACCAGAGCCAGATTATCTGGTCTTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp AGGCTCAAAAGGGTGAAAGGTGAAGGCAACAAGGCGTCGCACTGTGTGGTTGATACAACACATTCCCATTaGTCCAACTCCAGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RLKRVKGEGNKASHCVVDTTHSH*SNSSAL
Trigger: AAGAGCACTGGAGTTGGATCAATGGGAATGTGTTGT...ATCAACCACACAGTGCGACGCCTTGTTGCCTTCACCTTTCACCCTTTTGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR GCA 90 bp GCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAAGGATCCCTCTGACCGCTGGTCATTaGCATTGGACAGGATTTCTC +
Preference number: 4 (lower is better)
Translates to: APQIYQQPVFEGIDERIPLTAGH*HWTGFL
Trigger: GAGAAATCCTGTCCAATGGCAATGACCAGCGGTCAG...AGGGATCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR GCA 90 bp ATGGCCAGGATGTTTTTGTACAAGTACAGCCCTTGGTTGTGTGACAAGACCACCTGGATGGTCTGTTGTTaGACAGACAAGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: MARMFLYKYSPWLCDKTTWMVCC*TDKMAR
Trigger: CCTGGCCATCTTGTCTGTGCAACAACAGACCATCCA...GGTGGTCTTGTCACACAACCAAGGGCTGTACTTGTACAAAAACATCCTGGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR GCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCGCGCCTCTTGGCCATTaGACTACCATCCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSAPLGH*TTILFC
Trigger: GCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGC...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp GAGCAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAAAGTTTCCACATTCGCAGCTaGCGCAGTTGGTCAAAATAC +
Preference number: 4 (lower is better)
Translates to: EQVILIAKAANGPHINESFHIRS*RSWSKY
Trigger: GTATTTTGACCAACTGCGGCAGCTGCGAATGTGGAA...ACTTTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR GCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAAACCGGCGCTGGATCTaGCTTGCAAAATTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRNRRWI*LAKLLL
Trigger: TAGCAACAATTTTGCAAGGCAGATCCAGCGCCGGTT...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp AGAGGGGACCGTGGGTTGGGGGTCACTGATTCACTGTTCCGATATACCTCAAAATCAGCATTAGTCCTCTaGACAGAAATAGCGAAAGGC +
Preference number: 4 (lower is better)
Translates to: RGDRGLGVTDSLFRYTSKSALVL*TEIAKG
Trigger: GCCTTTCGCTATTTCTGTGCAGAGGACTAATGCTGA...TTTTGAGGTATATCGGAACAGTGAATCAGTGACCCCCAACCCACGGTCCCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAGCTGGTCATTGCCATTaGACAGGATTTCTCCTTCGT +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRAGHCH*TGFLLR
Trigger: ACGAAGGAGAAATCCTGTCCAATGGCAATGACCAGC...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp TTCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAGCTGGTCATTGCCATTaGACAGGATTTCTCCTTCGT +
Preference number: 4 (lower is better)
Translates to: FCPAPQIYQQPVFEGIDEAGHCH*TGFLLR
Trigger: ACGAAGGAGAAATCCTGTCCAATGGCAATGACCAGC...TTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR CCA 90 bp TCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAAATATTCACTGACCGCTaGTCATTGCCATTGGACAGG +
Preference number: 4 (lower is better)
Translates to: SARRHKYTSNRCLRELMKIFTDR*SLPLDR
Trigger: CCTGTCCAATGGCAATGACCAGCGGTCAGTGAATAT...TTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR CCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAATATTCACTGACCGCTaGTCATTGCCATTGGACAGG +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRIFTDR*SLPLDR
Trigger: CCTGTCCAATGGCAATGACCAGCGGTCAGTGAATAT...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGACCTGGAAGACATGGATaGTCTGTTGTTGCACAGACA +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRPGRHG*SVVAQT
Trigger: TGTCTGTGCAACAACAGACCATCCATGTCTTCCAGG...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAGTCACCTGGAAGACATaGATGGTCTGTTGTTGCACA +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRVTWKT*MVCCCT
Trigger: TGTGCAACAACAGACCATCCATGTCTTCCAGGTGAC...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp AGTGAGCAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAAGTCACCTGGAAGACATaGATGGTCTGTTGTTGCACA +
Preference number: 4 (lower is better)
Translates to: SEQVILIAKAANGPHINEVTWKT*MVCCCT
Trigger: TGTGCAACAACAGACCATCCATGTCTTCCAGGTGAC...TTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTGCTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp TTCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAGTCACCTGGAAGACATaGATGGTCTGTTGTTGCACA +
Preference number: 4 (lower is better)
Translates to: FCPAPQIYQQPVFEGIDEVTWKT*MVCCCT
Trigger: TGTGCAACAACAGACCATCCATGTCTTCCAGGTGAC...TTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp ATGGCCAGGATGTTTTTGTACAAGTACAGCCCTTGGTTGTGTGACAAGACCACCCCTTCAGGAGTCACCTaGAAGACATGGATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: MARMFLYKYSPWLCDKTTPSGVT*KTWMVC
Trigger: ACAGACCATCCATGTCTTCCAGGTGACTCCTGAAGG...GGTGGTCTTGTCACACAACCAAGGGCTGTACTTGTACAAAAACATCCTGGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGATCTTTGAACCGGCGCTaGATCTGCCTTGCAAAATTG +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRSLNRR*ICLAKL
Trigger: CAATTTTGCAAGGCAGATCCAGCGCCGGTTCAAAGA...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAGGCGTCGCACTGTGTaGTTGATGGGGCGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNRRRTV*LMGRPN
Trigger: ATTGGGCCGCCCCATCAACCACACAGTGCGACGCCT...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp CAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAAAGTGCCATTTCAAGAGATGTCTaGTCTGCCTTGCCTGAACTG +
Preference number: 4 (lower is better)
Translates to: QVILIAKAANGPHINESAISRDV*SALPEL
Trigger: CAGTTCAGGCAAGGCAGACCAGACATCTCTTGAAAT...GGCACTTTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558413.1
3UTR CAA 72 bp TACAAGTACAGCCCTTGGTTGTGTGACAAGACCACCTaGTCACACTTGAACGTGCGTGTATCACATAAGCGG +
Preference number: 4 (lower is better)
Translates to: YKYSPWLCDKTT*SHLNVRVSHKR
Trigger: CCGCTTATGTGATACACGCACGTTCAAGTGTGACAAGGTGGTCTTGTCACACAACCAAGGGCTGTACTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR CAA 72 bp CGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATaGATGAAAGGATCCCTAAAGGGATTGGCCATGCCT +
Preference number: 4 (lower is better)
Translates to: RHKYTSNRCLRE*MKGSLKGLAMP
Trigger: AGGCATGGCCAATCCCTTTAGGGATCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGCTGCCTTGCCTGAACTaGTCCGCCGGCGTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKLPCLN*SAGVPS
Trigger: GCTTGGAACGCCGGCGGATCAGTTCAGGCAAGGCAG...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGTGGGAGGTAGGCAGCTaGGCCCACGATGACACAGCG +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKWEVGS*AHDDTA
Trigger: CGCTGTGTCATCGTGGGCTCAGCTGCCTACCTCCCA...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACTTGGCCATGCCTGTCTaGCTGTCCCGCTGTACCTCA +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNLAMPV*LSRCTS
Trigger: TGAGGTACAGCGGGACAGTCAGACAGGCATGGCCAA...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCTCTTGGGCCGCTCCATaGCAGATACCCACTTGTCAT +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSSWAAP*QIPTCH
Trigger: ATGACAAGTGGGTATCTGTCATGGAGCGGCCCAAGA...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGCCTGGATCTCAAACTTaGGCAGGCCCGAGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKPGSQT*AGPSPG
Trigger: CCCGGGACTCGGGCCTGCTCAAGTTTGAGATCCAGG...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGATCAGCATTAGTCCTCTaGACAGAAATAGCGAAAGGC +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRSALVL*TEIAKG
Trigger: GCCTTTCGCTATTTCTGTGCAGAGGACTAATGCTGA...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp GGAAGACATGGATGGTCTGTTGTTGCACAGACAAGATGGCCAGGATGTTTTTGTTATCACATCTCTGTCTaGTCCGGGCTCAAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: GRHGWSVVAQTRWPGCFCYHISV*SGLKEP
Trigger: TGGCTCTTTGAGCCCGGACCAGACAGAGATGTGATA...ACAAAAACATCCTGGCCATCTTGTCTGTGCAACAACAGACCATCCATGTCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACCGGACTTGGTGCCAGTaGGTACCTGCCTTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNRTWCQ*VPALPE
Trigger: TTCAGGCAAGGCAGGTACCCACTGGCACCAAGTCCG...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR CCA 90 bp GCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAAGGATCCCTGCTGGTCATTGCCATTaGACAGGATTTCTCCTTCGT +
Preference number: 4 (lower is better)
Translates to: APQIYQQPVFEGIDERIPAGHCH*TGFLLR
Trigger: ACGAAGGAGAAATCCTGTCCAATGGCAATGACCAGC...AGGGATCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR CCA 90 bp ATGGCCAGGATGTTTTTGTACAAGTACAGCCCTTGGTTGTGTGACAAGACCACCATATTCACTGACCGCTaGTCATTGCCATTGGACAGG +
Preference number: 4 (lower is better)
Translates to: MARMFLYKYSPWLCDKTTIFTDR*SLPLDR
Trigger: CCTGTCCAATGGCAATGACCAGCGGTCAGTGAATAT...GGTGGTCTTGTCACACAACCAAGGGCTGTACTTGTACAAAAACATCCTGGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACGAGGGGACCGTGGGTTaGGGGTCACTGATTCACTGT +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNEGTVG*GSLIHC
Trigger: ACAGTGAATCAGTGACCCCCAACCCACGGTCCCCTC...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCGGAAGAAGCGCCTCTTaGCCATTGCACTACCATCCT +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSGRSAS*PLHYHP
Trigger: AGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCC...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp GAGCAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAAAGTGGCATAGAACCTGATTaGGTGATCTCCACAAGTCTT +
Preference number: 4 (lower is better)
Translates to: EQVILIAKAANGPHINESGIEPD*VISTSL
Trigger: AAGACTTGTGGAGATCACCCAATCAGGTTCTATGCC...ACTTTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp ACACAGCGGCAGTCATCAGTGAAGAGACTACACTCCCGGTTCAGGTGCTCACCAAACATCTTCAACTCTTaGTCATACAACACATTCCCA +
Preference number: 4 (lower is better)
Translates to: TQRQSSVKRLHSRFRCSPNIFNS*SYNTFP
Trigger: TGGGAATGTGTTGTATGACCAAGAGTTGAAGATGTT...TGGTGAGCACCTGAACCGGGAGTGTAGTCTCTTCACTGATGACTGCCGCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR CCA 90 bp ACACAGCGGCAGTCATCAGTGAAGAGACTACACTCCCGGTTCAGGTGCTCACCATCTAAGTTTGAATTCTaGCTCCAGCTTTGTGACTTT +
Preference number: 4 (lower is better)
Translates to: TQRQSSVKRLHSRFRCSPSKFEF*LQLCDF
Trigger: AAAGTCACAAAGCTGGAGCCAGAATTCAAACTTAGA...TGGTGAGCACCTGAACCGGGAGTGTAGTCTCTTCACTGATGACTGCCGCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR CCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACTTCCCAGCACCTGTCTaGTCCGGGCTCAAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNFPAPV*SGLKEP
Trigger: TGGCTCTTTGAGCCCGGACCAGACAGGTGCTGGGAA...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564406.5
CDS-3UTR CCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGACAGAGAGCAGGGAACTaGTCTAATTCCTTGCTGTAT +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRQRAGN*SNSLLY
Trigger: ATACAGCAAGGAATTAGACCAGTTCCCTGCTCTCTG...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564406.5
CDS-3UTR TCA 90 bp GAGCAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAAAGTGTTCCAAGCGGTGAATaGCATTTTGGTTTTGGATTC +
Preference number: 4 (lower is better)
Translates to: EQVILIAKAANGPHINESVPSGE*HFGFGF
Trigger: GAATCCAAAACCAAAATGTCATTCACCGCTTGGAAC...ACTTTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR TCA 90 bp AAAAGCTCATCTGATGTATTCTCAAACACAGCAATCACCTCTGTCGTCACCATAGCCCCGGATATTCACTaGCCGCTGGTCATTGCCATT +
Preference number: 4 (lower is better)
Translates to: KSSSDVFSNTAITSVVTIAPDIH*PLVIAI
Trigger: AATGGCAATGACCAGCGGTCAGTGAATATCCGGGGC...TATGGTGACGACAGAGGTGATTGCTGTGTTTGAGAATACATCAGATGAGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR TCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAGCGGCAGTCATCAGTaGAGAGACTACACTCCCGGT +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNSGSHQ*RDYTPG
Trigger: ACCGGGAGTGTAGTCTCTTCACTGATGACTGCCGCT...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCTGGGTTGGGGGTCACTaGTTCACTGTTCCGATATAC +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSWVGGH*FTVPIY
Trigger: GTATATCGGAACAGTGAATCAGTGACCCCCAACCCA...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp ACGCCTGGCCTGAAGTCTAAGTTTGAATTCTGGCTCCAGCTTTGTGACTTTCAGCGGTGTGAAGGTCAATaGTATGGAGGGAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: TPGLKSKFEFWLQLCDFQRCEGQ*YGGNSL
Trigger: AAGACTATTCCCTCCATATCATTGACCTTCACACCG...CTGAAAGTCACAAAGCTGGAGCCAGAATTCAAACTTAGACTTCAGGCCAGGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR TCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCTGGTCCGCACATCAATaGAAGTGCCTTCAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSWSAHQ*KCLQES
Trigger: TGACTCCTGAAGGCACTTTCATTGATGTGCGGACCA...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACTGTAAGACTGAGCACTaGTGGGGAGCTGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNCKTEH*WGADPA
Trigger: TGCTGGGTCAGCTCCCCATCAGTGCTCAGTCTTACA...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACATAATCTGGCTCTGGTaGGGCACCTACGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNIIWLW*GTYVQQ
Trigger: CTGCTGCACGTAGGTGCCTCACCAGAGCCAGATTAT...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACATAATGCCGAAGAAGTaGCATGAAGGGGATAAAAGT +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHIMPKK*HEGDKS
Trigger: ACTTTTATCCCCTTCATGTCACTTCTTCGGCATTAT...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp TCTGTTGTTGCACAGACAAGATGGCCAGGATGTTTTTGTACAAGTACAGCCCTTTGGATGGTCTGTTGTTaGACAGACAAGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SVVAQTRWPGCFCTSTALWMVCC*TDKMAR
Trigger: CCTGGCCATCTTGTCTGTGCAACAACAGACCATCCA...AAGGGCTGTACTTGTACAAAAACATCCTGGCCATCTTGTCTGTGCAACAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR GCA 90 bp GACAGATACCCACTTGTCATCATAACTGAAGAGAGACAAATCCAGATAGGGGCTACTACCATCCTGTTCTaGCCGGCGCCACAAATATAC +
Preference number: 4 (lower is better)
Translates to: DRYPLVIITEERQIQIGATTILF*PAPQIY
Trigger: GTATATTTGTGGCGCCGGGCAGAACAGGATGGTAGT...AGCCCCTATCTGGATTTGTCTCTCTTCAGTTATGATGACAAGTGGGTATCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR GCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACGCGCCTCTTGGCCATTaGACTACCATCCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNAPLGH*TTILFC
Trigger: GCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGC...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCCGTACTGCCTCTGTGTaGCCTCCATACTTGGCATTT +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSRTASV*PPYLAF
Trigger: AAATGCCAAGTATGGAGGGCACACAGAGGCAGTACG...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGCAGCAGCCGGCGTACTaGCTCTGTGTGCCCTCCATA +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKQQPAY*LCVPSI
Trigger: TATGGAGGGCACACAGAGGCAGTACGCCGGCTGCTG...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACGGTGAGGCACCTACGTaGAGCAGTGTCGCATATGGA +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNGEAPT*SSVAYG
Trigger: TCCATATGCGACACTGCTGCACGTAGGTGCCTCACC...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp AAAAGCTCATCTGATGTATTCTCAAACACAGCAATCACCTCTGTCGTCACCATATCTCCCAGGAACAGCTaGTGCATCCATGGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: KSSSDVFSNTAITSVVTISPRNS*CIHGLS
Trigger: TGAGAGGCCATGGATGCAGCAGCTGTTCCTGGGAGA...TATGGTGACGACAGAGGTGATTGCTGTGTTTGAGAATACATCAGATGAGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR CCA 90 bp GGAAGACATGGATGGTCTGTTGTTGCACAGACAAGATGGCCAGGATGTTTTTGTTACAAGTACAGCCCTTaGTTGTGTGACAAGACCACC +
Preference number: 4 (lower is better)
Translates to: GRHGWSVVAQTRWPGCFCYKYSP*LCDKTT
Trigger: GGTGGTCTTGTCACACAACCAAGGGCTGTACTTGTA...ACAAAAACATCCTGGCCATCTTGTCTGTGCAACAACAGACCATCCATGTCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp TCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAAGTTGCACAGACAAGATaGCCAGGATGTTTTTGTACA +
Preference number: 4 (lower is better)
Translates to: SARRHKYTSNRCLRELMKVAQTR*PGCFCT
Trigger: TGTACAAAAACATCCTGGCCATCTTGTCTGTGCAAC...TTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp AGCTCCAAAAGCTCATCTGATGTATTCTCAAACACAGCAATCACCTCTGTCGTCCCTTCAGGAGTCACCTaGAAGACATGGATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: SSKSSSDVFSNTAITSVVPSGVT*KTWMVC
Trigger: ACAGACCATCCATGTCTTCCAGGTGACTCCTGAAGG...GACGACAGAGGTGATTGCTGTGTTTGAGAATACATCAGATGAGCTTTTGGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR CCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCCCTTCAGGAGTCACCTaGAAGACATGGATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSPSGVT*KTWMVC
Trigger: ACAGACCATCCATGTCTTCCAGGTGACTCCTGAAGG...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGACAGCAGTGTCGCATATaGAAGTTGACAACATACTCA +
Preference number: 4 (lower is better)
Translates to: AGTNRASSRELLLWSPLRQQCRI*KLTTYS
Trigger: TGAGTATGTTGTCAACTTCCATATGCGACACTGCTG...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
3UTR CAA 72 bp ATGGCCAGGATGTTTTTGTACAAGTACAGCCCTTGGTaGTGTGACAAGACCACCTTGTCACACTTGAACGTG +
Preference number: 4 (lower is better)
Translates to: MARMFLYKYSPW*CDKTTLSHLNV
Trigger: CACGTTCAAGTGTGACAAGGTGGTCTTGTCACACAACCAAGGGCTGTACTTGTACAAAAACATCCTGGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR CAA 72 bp GTCTGTTGTTGCACAGACAAGATGGCCAGGATGTTTTaGTACAAGTACAGCCCTTGGTTGTGTGACAAGACC +
Preference number: 4 (lower is better)
Translates to: VCCCTDKMARMF*YKYSPWLCDKT
Trigger: GGTCTTGTCACACAACCAAGGGCTGTACTTGTACAAAAACATCCTGGCCATCTTGTCTGTGCAACAACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACCATAAGCGGCCGGTGTaGAGGTCAATGATATGGAGG +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNHKRPV*RSMIWR
Trigger: CCTCCATATCATTGACCTTCACACCGGCCGCTTATG...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCCCACCTTGTCACACTTaGACGTGCGTGTATCACATA +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSPPCHT*TCVYHI
Trigger: TATGTGATACACGCACGTTCAAGTGTGACAAGGTGG...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp TCTGTTGTTGCACAGACAAGATGGCCAGGATGTTTTTGTACAAGTACAGCCCTTCCACCTTGTCACACTTaGACGTGCGTGTATCACATA +
Preference number: 4 (lower is better)
Translates to: SVVAQTRWPGCFCTSTALPPCHT*TCVYHI
Trigger: TATGTGATACACGCACGTTCAAGTGTGACAAGGTGG...AAGGGCTGTACTTGTACAAAAACATCCTGGCCATCTTGTCTGTGCAACAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGTTGGCCATGCCTGTCTaGCTGTCCCGCTGTACCTCA +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKLAMPV*LSRCTS
Trigger: TGAGGTACAGCGGGACAGTCAGACAGGCATGGCCAA...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCCCTGTGATGGATCTGTaGCTCGCAGTGTTACTACAT +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSPVMDL*LAVLLH
Trigger: ATGTAGTAACACTGCGAGTCACAGATCCATCACAGG...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCAAAGAAAGATGCCTGTaGTGGATCTGTGACTCGCAG +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSKERCL*WICDSQ
Trigger: CTGCGAGTCACAGATCCATCACAGGCATCTTTCTTT...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACACTTGTCATCATAACTaGAGAGAGACAAATCCAGAT +
Preference number: 4 (lower is better)
Translates to: SRLELTELVVGSFCFGVHTCHHN*RETNPD
Trigger: ATCTGGATTTGTCTCTCTTCAGTTATGATGACAAGT...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACCAAAAGGGTGAAAGGTaGAGGCAACAAGGCGTCGCA +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNQKGER*RQQGVA
Trigger: TGCGACGCCTTGTTGCCTTCACCTTTCACCCTTTTG...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GAAGTTGACAACATACTCAGCATTAGTCCTCTGCACAGAAATAGCGAAAGGCTCAAAATTCCATTAGGTTaGGCCACCCTCACTCCTCTC +
Preference number: 4 (lower is better)
Translates to: EVDNILSISPLHRNSERLKIPLG*ATLTPL
Trigger: GAGAGGAGTGAGGGTGGCTCAACCTAATGGAATTTT...GAGCCTTTCGCTATTTCTGTGCAGAGGACTAATGCTGAGTATGTTGTCAACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCAAAATTCCATTAGGTTaGGCCACCCTCACTCCTCTC +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSKIPLG*ATLTPL
Trigger: GAGAGGAGTGAGGGTGGCTCAACCTAATGGAATTTT...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGCACTCCCGGTTCAGGTaGTCACCATTGGCCGCAACA +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKHSRFR*SPLAAT
Trigger: TGTTGCGGCCAATGGTGAGCACCTGAACCGGGAGTG...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCTTCCACATTCGCAGCTaGCGCAGTTGGTCAAAATAC +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSFHIRS*RSWSKY
Trigger: GTATTTTGACCAACTGCGGCAGCTGCGAATGTGGAA...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGCGGACTTGGTGCCAGTaGGTACCTGCCTTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKRTWCQ*VPALPE
Trigger: TTCAGGCAAGGCAGGTACCCACTGGCACCAAGTCCG...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR CCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGTGGAACACTCGGACTTaGTGCCAGTGGGTACCTGCC +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKWNTRT*CQWVPA
Trigger: GGCAGGTACCCACTGGCACCAAGTCCGAGTGTTCCA...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR CCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCTACAAGTACAGCCCTTaGTTGTGTGACAAGACCACC +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSYKYSP*LCDKTT
Trigger: GGTGGTCTTGTCACACAACCAAGGGCTGTACTTGTA...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp GCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAAGGATCCCTGTTGCACAGACAAGATaGCCAGGATGTTTTTGTACA +
Preference number: 4 (lower is better)
Translates to: APQIYQQPVFEGIDERIPVAQTR*PGCFCT
Trigger: TGTACAAAAACATCCTGGCCATCTTGTCTGTGCAAC...AGGGATCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCGTCACCTGGAAGACATaGATGGTCTGTTGTTGCACA +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSVTWKT*MVCCCT
Trigger: TGTGCAACAACAGACCATCCATGTCTTCCAGGTGAC...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACGGAAGAAGCGCCTCTTaGCCATTGCACTACCATCCT +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNGRSAS*PLHYHP
Trigger: AGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCC...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp CATATGGAAGTTGACAACATACTCAGCATTAGTCCTCTGCACAGAAATAGCGAAGGAAGAAGCGCCTCTTaGCCATTGCACTACCATCCT +
Preference number: 4 (lower is better)
Translates to: HMEVDNILSISPLHRNSEGRSAS*PLHYHP
Trigger: AGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCC...TTCGCTATTTCTGTGCAGAGGACTAATGCTGAGTATGTTGTCAACTTCCATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp GAAGTTGACAACATACTCAGCATTAGTCCTCTGCACAGAAATAGCGAAAGGCTCAGTTGGTCAAAATACTaGAAGAAGCGCCTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: EVDNILSISPLHRNSERLSWSKY*KKRLLA
Trigger: GGCCAAGAGGCGCTTCTTCCAGTATTTTGACCAACT...GAGCCTTTCGCTATTTCTGTGCAGAGGACTAATGCTGAGTATGTTGTCAACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCTCTTTGAACCGGCGCTaGATCTGCCTTGCAAAATTG +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSSLNRR*ICLAKL
Trigger: CAATTTTGCAAGGCAGATCCAGCGCCGGTTCAAAGA...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp TATTCTCAAACACAGCAATCACCTCTGTCGTCACCATATTGTACACCACAAAGACCCAATAACCCCGCCTaGATCTCAAACTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: YSQTQQSPLSSPYCTPQRPNNPA*ISNLSR
Trigger: CCTGCTCAAGTTTGAGATCCAGGCGGGGTTATTGGG...TCTTTGTGGTGTACAATATGGTGACGACAGAGGTGATTGCTGTGTTTGAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR TCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACCGGCGTTCCAAGCGGTaGATGACATTTTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNRRSKR*MTFWFW
Trigger: CCAAAACCAAAATGTCATTCACCGCTTGGAACGCCG...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACTTGGGGAAGACATTCTaGTGGAACACTCGGACTTGG +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNLGKTF*WNTRTW
Trigger: CCAAGTCCGAGTGTTCCATCAGAATGTCTTCCCCAA...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR TCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCGTAGCGTCCATCAGGTaGGAATTTACGCAAGAAACA +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSVASIR*EFTQET
Trigger: TGTTTCTTGCGTAAATTCTCACCTGATGGACGCTAC...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGGCCCCGGATATTCACTaGCCGCTGGTCATTGCCATT +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKAPDIH*PLVIAI
Trigger: AATGGCAATGACCAGCGGTCAGTGAATATCCGGGGC...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACTGGGTTGGGGGTCACTaGTTCACTGTTCCGATATAC +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNWVGGH*FTVPIY
Trigger: GTATATCGGAACAGTGAATCAGTGACCCCCAACCCA...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACTGGTCCGCACATCAATaGAAGTGCCTTCAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNWSAHQ*KCLQES
Trigger: TGACTCCTGAAGGCACTTTCATTGATGTGCGGACCA...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGTGTAAGACTGAGCACTaGTGGGGAGCTGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKCKTEH*WGADPA
Trigger: TGCTGGGTCAGCTCCCCATCAGTGCTCAGTCTTACA...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGCCCGGGCATAGAACCTaGTTGGGTGATCTCCACAAG +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKPGHRT*LGDLHK
Trigger: CTTGTGGAGATCACCCAATCAGGTTCTATGCCCGGG...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGATAATCTGGCTCTGGTaGGGCACCTACGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKIIWLW*GTYVQQ
Trigger: CTGCTGCACGTAGGTGCCTCACCAGAGCCAGATTAT...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGTGGCTCTCTCCCATCTaGGGTATAGCAGGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKWLSPI*GIAGWN
Trigger: GTTCCAGCCTGCTATACCTCAGATGGGAGAGAGCCA...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp TCTGTTGTTGCACAGACAAGATGGCCAGGATGTTTTTGTACAAGTACAGCCCTTTACTTTCTCTGTGCCTaGATTCCTTATCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: SVVAQTRWPGCFCTSTALYFLCA*IPYLWS
Trigger: GGACCACAGATAAGGAATTCAGGCACAGAGAAAGTA...AAGGGCTGTACTTGTACAAAAACATCCTGGCCATCTTGTCTGTGCAACAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR GCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGAACACTCGGACTTGGTaGCAGTGGGTACCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKNTRTW*QWVPAL
Trigger: CAAGGCAGGTACCCACTGGCACCAAGTCCGAGTGTT...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR GCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACCTGACCGCTGGTCATTaGCATTGGACAGGATTTCTC +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNLTAGH*HWTGFL
Trigger: GAGAAATCCTGTCCAATGGCAATGACCAGCGGTCAG...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACTGGATGGTCTGTTGTTaGACAGACAAGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNWMVCC*TDKMAR
Trigger: CCTGGCCATCTTGTCTGTGCAACAACAGACCATCCA...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACACTACCATCCTGTTCTaGCCGGCGCCACAAATATAC +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNTTILF*PAPQIY
Trigger: GTATATTTGTGGCGCCGGGCAGAACAGGATGGTAGT...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGGCGCCTCTTGGCCATTaGACTACCATCCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKAPLGH*TTILFC
Trigger: GCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGC...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp TCACAGTCCTTCCTGGAACCCAAGTACTTGAAAGCATTGAGTATGATAGGAACAAACCGGCGCTGGATCTaGCTTGCAAAATTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: SQSFLEPKYLKALSMIGTNRRWI*LAKLLL
Trigger: TAGCAACAATTTTGCAAGGCAGATCCAGCGCCGGTT...TGTTCCTATCATACTCAATGCTTTCAAGTACTTGGGTTCCAGGAAGGACTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR GCA 90 bp TCAAAGAGCTCCAAAAGCTCATCTGATGTATTCTCAAACACAGCAATCACCTCTCGTACTGCCTCTGTGTaGCCTCCATACTTGGCATTT +
Preference number: 4 (lower is better)
Translates to: SKSSKSSSDVFSNTAITSRTASV*PPYLAF
Trigger: AAATGCCAAGTATGGAGGGCACACAGAGGCAGTACG...AGAGGTGATTGCTGTGTTTGAGAATACATCAGATGAGCTTTTGGAGCTCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR GCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCTCAGCATTAGTCCTCTaGACAGAAATAGCGAAAGGC +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSSALVL*TEIAKG
Trigger: GCCTTTCGCTATTTCTGTGCAGAGGACTAATGCTGA...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp GAAGTTGACAACATACTCAGCATTAGTCCTCTGCACAGAAATAGCGAAAGGCTCTCAGCATTAGTCCTCTaGACAGAAATAGCGAAAGGC +
Preference number: 4 (lower is better)
Translates to: EVDNILSISPLHRNSERLSALVL*TEIAKG
Trigger: GCCTTTCGCTATTTCTGTGCAGAGGACTAATGCTGA...GAGCCTTTCGCTATTTCTGTGCAGAGGACTAATGCTGAGTATGTTGTCAACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR GCA 90 bp TCACAGTCCTTCCTGGAACCCAAGTACTTGAAAGCATTGAGTATGATAGGAACAAGGTTTCACCATGTTTaGCAGGATGGTCTCGATCTC +
Preference number: 4 (lower is better)
Translates to: SQSFLEPKYLKALSMIGTRFHHV*QDGLDL
Trigger: GAGATCGAGACCATCCTGGCAAACATGGTGAAACCT...TGTTCCTATCATACTCAATGCTTTCAAGTACTTGGGTTCCAGGAAGGACTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR CCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACTATCACATCTCTGTCTaGTCCGGGCTCAAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNYHISV*SGLKEP
Trigger: TGGCTCTTTGAGCCCGGACCAGACAGAGATGTGATA...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACCGCAGCTGCCGCAGTTaGTCAAAATACTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNRSCRS*SKYWKK
Trigger: CTTCTTCCAGTATTTTGACCAACTGCGGCAGCTGCG...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCGGCATAGAACCTGATTaGGTGATCTCCACAAGTCTT +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSGIEPD*VISTSL
Trigger: AAGACTTGTGGAGATCACCCAATCAGGTTCTATGCC...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp TATTCTCAAACACAGCAATCACCTCTGTCGTCACCATATTGTACACCACAAAGACAGCTGCTGCATCCATaGCCTCTCATCTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: YSQTQQSPLSSPYCTPQRQLLHP*PLISFT
Trigger: TGTGAAAGAGATGAGAGGCCATGGATGCAGCAGCTG...TCTTTGTGGTGTACAATATGGTGACGACAGAGGTGATTGCTGTGTTTGAGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR TCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCGTTCCAAGCGGTGAATaGCATTTTGGTTTTGGATTC +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSVPSGE*HFGFGF
Trigger: GAATCCAAAACCAAAATGTCATTCACCGCTTGGAAC...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGCATAAGCGGCCGGTGTaGAGGTCAATGATATGGAGG +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKHKRPV*RSMIWR
Trigger: CCTCCATATCATTGACCTTCACACCGGCCGCTTATG...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGCAGCCCTTGGTTGTGTaGCAAGACCACCTTGTCACA +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKQPLVV*QDHLVT
Trigger: TGTGACAAGGTGGTCTTGTCACACAACCAAGGGCTG...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACCCTGTGATGGATCTGTaGCTCGCAGTGTTACTACAT +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNPVMDL*LAVLLH
Trigger: ATGTAGTAACACTGCGAGTCACAGATCCATCACAGG...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp TCAAAGAGCTCCAAAAGCTCATCTGATGTATTCTCAAACACAGCAATCACCTCTAAAGAAAGATGCCTGTaGTGGATCTGTGACTCGCAG +
Preference number: 4 (lower is better)
Translates to: SKSSKSSSDVFSNTAITSKERCL*WICDSQ
Trigger: CTGCGAGTCACAGATCCATCACAGGCATCTTTCTTT...AGAGGTGATTGCTGTGTTTGAGAATACATCAGATGAGCTTTTGGAGCTCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGTCTTGGGCCGCTCCATaGCAGATACCCACTTGTCAT +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKSWAAP*QIPTCH
Trigger: ATGACAAGTGGGTATCTGTCATGGAGCGGCCCAAGA...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGCAAAAGGGTGAAAGGTaGAGGCAACAAGGCGTCGCA +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKQKGER*RQQGVA
Trigger: TGCGACGCCTTGTTGCCTTCACCTTTCACCCTTTTG...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp TATTCTCAAACACAGCAATCACCTCTGTCGTCACCATATTGTACACCACAAAGAAAAGGCTCAAAAGGGTaGAAGGTGAAGGCAACAAGG +
Preference number: 4 (lower is better)
Translates to: YSQTQQSPLSSPYCTPQRKGSKG*KVKATR
Trigger: CCTTGTTGCCTTCACCTTTCACCCTTTTGAGCCTTT...TCTTTGTGGTGTACAATATGGTGACGACAGAGGTGATTGCTGTGTTTGAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR TCA 90 bp CTTGTCATCATAACTGAAGAGAGACAAATCCAGATAGGGGCTACCGCTGTAAGACTGGCTCCAGCTTTGTaGCTTTCAGAAGATTACTTA +
Preference number: 4 (lower is better)
Translates to: LVIITEERQIQIGATAVRLAPAL*LSEDYL
Trigger: TAAGTAATCTTCTGAAAGTCACAAAGCTGGAGCCAG...TCTTACAGCGGTAGCCCCTATCTGGATTTGTCTCTCTTCAGTTATGATGACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR GCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAACCGGCGCTGGATCTaGCTTGCAAAATTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNNRRWI*LAKLLL
Trigger: TAGCAACAATTTTGCAAGGCAGATCCAGCGCCGGTT...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACGCTGGTCATTGCCATTaGACAGGATTTCTCCTTCGT +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNAGHCH*TGFLLR
Trigger: ACGAAGGAGAAATCCTGTCCAATGGCAATGACCAGC...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp TATTCTCAAACACAGCAATCACCTCTGTCGTCACCATATTGTACACCACAAAGATACAAGTACAGCCCTTaGTTGTGTGACAAGACCACC +
Preference number: 4 (lower is better)
Translates to: YSQTQQSPLSSPYCTPQRYKYSP*LCDKTT
Trigger: GGTGGTCTTGTCACACAACCAAGGGCTGTACTTGTA...TCTTTGTGGTGTACAATATGGTGACGACAGAGGTGATTGCTGTGTTTGAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR CCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCGTTGCACAGACAAGATaGCCAGGATGTTTTTGTACA +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSVAQTR*PGCFCT
Trigger: TGTACAAAAACATCCTGGCCATCTTGTCTGTGCAAC...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp AAAAGCTCATCTGATGTATTCTCAAACACAGCAATCACCTCTGTCGTCACCATAAGTTGGTCAAAATACTaGAAGAAGCGCCTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: KSSSDVFSNTAITSVVTISWSKY*KKRLLA
Trigger: GGCCAAGAGGCGCTTCTTCCAGTATTTTGACCAACT...TATGGTGACGACAGAGGTGATTGCTGTGTTTGAGAATACATCAGATGAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR CCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGCCCAATAACCCCGCCTaGATCTCAAACTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKPNNPA*ISNLSR
Trigger: CCTGCTCAAGTTTGAGATCCAGGCGGGGTTATTGGG...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
3UTR CAA 72 bp GTGACTCGCAGTGTTACTACATCCTCACTAGTGTACTaGATAAACAGGTGGTTTTCATCCAGAAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: VTRSVTTSSLVY*INRWFSSRSCI
Trigger: AATGCAGCTTCTGGATGAAAACCACCTGTTTATCAAGTACACTAGTGAGGATGTAGTAACACTGCGAGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
3UTR CAA 72 bp TTCTCAAACACAGCAATCACCTCTGTCGTCACCATATaGTACACCACAAAGAAAGATGCCTGTGATGGATCT +
Preference number: 4 (lower is better)
Translates to: FSNTAITSVVTI*YTTKKDACDGS
Trigger: AGATCCATCACAGGCATCTTTCTTTGTGGTGTACAATATGGTGACGACAGAGGTGATTGCTGTGTTTGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
3UTR CAA 72 bp TATATGCTGGGCCTCTCCTTGAAACATCTTCAACTCTaGGTCATACAACACATTCCCATTGATCCAACTCCA +
Preference number: 4 (lower is better)
Translates to: YMLGLSLKHLQL*VIQHIPIDPTP
Trigger: TGGAGTTGGATCAATGGGAATGTGTTGTATGACCAAGAGTTGAAGATGTTTCAAGGAGAGGCCCAGCATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGCGGCGTTCCAAGCGGTaGATGACATTTTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKRRSKR*MTFWFW
Trigger: CCAAAACCAAAATGTCATTCACCGCTTGGAACGCCG...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGTTGGGGAAGACATTCTaGTGGAACACTCGGACTTGG +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKLGKTF*WNTRTW
Trigger: CCAAGTCCGAGTGTTCCATCAGAATGTCTTCCCCAA...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR TCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACGTAGCGTCCATCAGGTaGGAATTTACGCAAGAAACA +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNVASIR*EFTQET
Trigger: TGTTTCTTGCGTAAATTCTCACCTGATGGACGCTAC...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR TCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACCGGTGTGAAGGTCAATaGTATGGAGGGAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNRCEGQ*YGGNSL
Trigger: AAGACTATTCCCTCCATATCATTGACCTTCACACCG...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGAAACAGCTGACACAGTaGGCAGGTCATCCTCATAGC +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKKQLTQ*AGHPHS
Trigger: GCTATGAGGATGACCTGCTCACTGTGTCAGCTGTTT...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGCGTACTGCCTCTGTGTaGCCTCCATACTTGGCATTT +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKRTASV*PPYLAF
Trigger: AAATGCCAAGTATGGAGGGCACACAGAGGCAGTACG...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACTCAGCATTAGTCCTCTaGACAGAAATAGCGAAAGGC +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNSALVL*TEIAKG
Trigger: GCCTTTCGCTATTTCTGTGCAGAGGACTAATGCTGA...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGCCTTCAGGAGTCACCTaGAAGACATGGATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKPSGVT*KTWMVC
Trigger: ACAGACCATCCATGTCTTCCAGGTGACTCCTGAAGG...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACGTTCCAAGCGGTGAATaGCATTTTGGTTTTGGATTC +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNVPSGE*HFGFGF
Trigger: GAATCCAAAACCAAAATGTCATTCACCGCTTGGAAC...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGCCACCTTGTCACACTTaGACGTGCGTGTATCACATA +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKPPCHT*TCVYHI
Trigger: TATGTGATACACGCACGTTCAAGTGTGACAAGGTGG...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGCCTGTGATGGATCTGTaGCTCGCAGTGTTACTACAT +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKPVMDL*LAVLLH
Trigger: ATGTAGTAACACTGCGAGTCACAGATCCATCACAGG...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGAAAGAAAGATGCCTGTaGTGGATCTGTGACTCGCAG +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKKERCL*WICDSQ
Trigger: CTGCGAGTCACAGATCCATCACAGGCATCTTTCTTT...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCACTTGTCATCATAACTaGAGAGAGACAAATCCAGAT +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSTCHHN*RETNPD
Trigger: ATCTGGATTTGTCTCTCTTCAGTTATGATGACAAGT...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp TCTGTTGTTGCACAGACAAGATGGCCAGGATGTTTTTGTACAAGTACAGCCCTTACTTGTCATCATAACTaGAGAGAGACAAATCCAGAT +
Preference number: 4 (lower is better)
Translates to: SVVAQTRWPGCFCTSTALTCHHN*RETNPD
Trigger: ATCTGGATTTGTCTCTCTTCAGTTATGATGACAAGT...AAGGGCTGTACTTGTACAAAAACATCCTGGCCATCTTGTCTGTGCAACAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGAAAGGCTCAAAAGGGTaGAAGGTGAAGGCAACAAGG +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKKGSKG*KVKATR
Trigger: CCTTGTTGCCTTCACCTTTCACCCTTTTGAGCCTTT...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp TCACAGTCCTTCCTGGAACCCAAGTACTTGAAAGCATTGAGTATGATAGGAACAATAATGCCGAAGAAGTaGCATGAAGGGGATAAAAGT +
Preference number: 4 (lower is better)
Translates to: SQSFLEPKYLKALSMIGTIMPKK*HEGDKS
Trigger: ACTTTTATCCCCTTCATGTCACTTCTTCGGCATTAT...TGTTCCTATCATACTCAATGCTTTCAAGTACTTGGGTTCCAGGAAGGACTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR GCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGGCGCTGGATCTGCCTTaGAAAATTGTTGCTAGAAGC +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKALDLP*KIVARS
Trigger: GCTTCTAGCAACAATTTTGCAAGGCAGATCCAGCGC...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCATGACATTTTGGTTTTaGATTCTTCGAGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: MLGIPTGKTQEDIITISSMTFWF*ILRGLM
Trigger: CATCAAGCCTCGAAGAATCCAAAACCAAAATGTCAT...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGATATTCACTGACCGCTaGTCATTGCCATTGGACAGG +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKIFTDR*SLPLDR
Trigger: CCTGTCCAATGGCAATGACCAGCGGTCAGTGAATAT...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGTACAAGTACAGCCCTTaGTTGTGTGACAAGACCACC +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKYKYSP*LCDKTT
Trigger: GGTGGTCTTGTCACACAACCAAGGGCTGTACTTGTA...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGAGTTGGTCAAAATACTaGAAGAAGCGCCTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKSWSKY*KKRLLA
Trigger: GGCCAAGAGGCGCTTCTTCCAGTATTTTGACCAACT...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGTCTTTGAACCGGCGCTaGATCTGCCTTGCAAAATTG +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKSLNRR*ICLAKL
Trigger: CAATTTTGCAAGGCAGATCCAGCGCCGGTTCAAAGA...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGCGGTGTGAAGGTCAATaGTATGGAGGGAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKRCEGQ*YGGNSL
Trigger: AAGACTATTCCCTCCATATCATTGACCTTCACACCG...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGATTGTTGCTAGAAGCTaGGCAGGGAAACTGAACTTC +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKIVARS*AGKLNF
Trigger: GAAGTTCAGTTTCCCTGCTCAGCTTCTAGCAACAAT...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACATAATGCCGAAGAAGTaGCATGAAGGGGATAAAAGT +
Preference number: 4 (lower is better)
Translates to: DLINAGHSHRENARGYYNIMPKK*HEGDKS
Trigger: ACTTTTATCCCCTTCATGTCACTTCTTCGGCATTAT...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGGGCATAGAACCTGATTaGGTGATCTCCACAAGTCTT +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKGIEPD*VISTSL
Trigger: AAGACTTGTGGAGATCACCCAATCAGGTTCTATGCC...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGGTTCCAAGCGGTGAATaGCATTTTGGTTTTGGATTC +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKVPSGE*HFGFGF
Trigger: GAATCCAAAACCAAAATGTCATTCACCGCTTGGAAC...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR GCA 90 bp TCAAAGAGCTCCAAAAGCTCATCTGATGTATTCTCAAACACAGCAATCACCTCTTACTTACTTTCTCTGTaGCTGAATTCCTTATCTGTG +
Preference number: 4 (lower is better)
Translates to: SKSSKSSSDVFSNTAITSYLLSL*LNSLSV
Trigger: CACAGATAAGGAATTCAGGCACAGAGAAAGTAAGTA...AGAGGTGATTGCTGTGTTTGAGAATACATCAGATGAGCTTTTGGAGCTCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR CCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGGTTGCACAGACAAGATaGCCAGGATGTTTTTGTACA +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKVAQTR*PGCFCT
Trigger: TGTACAAAAACATCCTGGCCATCTTGTCTGTGCAAC...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGCAGCAGTGTCGCATATaGAAGTTGACAACATACTCA +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKQQCRI*KLTTYS
Trigger: TGAGTATGTTGTCAACTTCCATATGCGACACTGCTG...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
3UTR CAA 72 bp AACATCTTCAACTCTTGGTCATACAACACATTCCCATaGATCCAACTCCAGTGCTCTTCCACAGTATATTTT +
Preference number: 4 (lower is better)
Translates to: NIFNSWSYNTFP*IQLQCSSTVYF
Trigger: AAAATATACTGTGGAAGAGCACTGGAGTTGGATCAATGGGAATGTGTTGTATGACCAAGAGTTGAAGATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR TCA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGACTTGTCATCATAACTaGAGAGAGACAAATCCAGAT +
Preference number: 4 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKTCHHN*RETNPD
Trigger: ATCTGGATTTGTCTCTCTTCAGTTATGATGACAAGT...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp AAGGCAACAAGGCGTCGCACTGTGTGGTTGATGGGGCGGCCCAATAACCCCGCCAGCGCCTCTTGGCCATaGCACTACCATCCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: KATRRRTVWLMGRPNNPASASWP*HYHPVL
Trigger: CAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCT...GGCGGGGTTATTGGGCCGCCCCATCAACCACACAGTGCGACGCCTTGTTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp GGGCGGCCCAATAACCCCGCCTGGATCTCAAACTTGAGCAGGCCCGAGTCCCGGACCACCTTGTCACACTaGAACGTGCGTGTATCACAT +
Preference number: 5 (lower is better)
Translates to: GRPNNPAWISNLSRPESRTTLSH*NVRVSH
Trigger: ATGTGATACACGCACGTTCAAGTGTGACAAGGTGGT...CCGGGACTCGGGCCTGCTCAAGTTTGAGATCCAGGCGGGGTTATTGGGCCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp CGAGTCCCGGGCATAGAACCTGATTGGGTGATCTCCACAAGTCTTGGGCCGCTCAGACGGGAGGATCGTTaGAGCCCAGGAGGTCTACAG +
Preference number: 5 (lower is better)
Translates to: RVPGIEPDWVISTSLGPLRREDR*SPGGLQ
Trigger: CTGTAGACCTCCTGGGCTCAAACGATCCTCCCGTCT...GAGCGGCCCAAGACTTGTGGAGATCACCCAATCAGGTTCTATGCCCGGGACTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS GCA 90 bp GTGGGGAGCCTTCGAGCTCCACTTCTGCTCACTAGAGTTAATGTGTaGTACTGCCAGGCAGCAACTGCTGACAACTCGCCTGGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: VGSLRAPLLLTRVNV*YCQAATADNSPGVL
Trigger: CAGCACCCCAGGCGAGTTGTCAGCAGTTGCTGCCTGGCAGTAGCACACATTAACTCTAGTGAGCAGAAGTGGAGCTCGAAGGCTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS GCA 90 bp GCAGCTCAAGGTGCAGCAGTGTGGGGAGCCTTCGAGCTCCACTTCTaGTCACTAGAGTTAATGTGTGCTACTGCCAGGCAGCAACTGCTG +
Preference number: 5 (lower is better)
Translates to: AAQGAAVWGAFELHF*SLELMCATARQQLL
Trigger: CAGCAGTTGCTGCCTGGCAGTAGCACACATTAACTCTAGTGAGCAGAAGTGGAGCTCGAAGGCTCCCCACACTGCTGCACCTTGAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS-3UTR CAA 90 bp TCCACATTCGCAGCTGCCGCAGTTGGTCAAAATACTGGAAGAAGCGCCTCTTGGAGAGGGGACCGTGGGTaGGGGGTCACTGATTCACTG +
Preference number: 5 (lower is better)
Translates to: STFAAAAVGQNTGRSASWRGDRG*GVTDSL
Trigger: CAGTGAATCAGTGACCCCCAACCCACGGTCCCCTCT...CCAAGAGGCGCTTCTTCCAGTATTTTGACCAACTGCGGCAGCTGCGAATGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp GGAAGAAGCGCCTCTTGGCCATTGCACTACCATCCTGTTCTGCCCGGCGCCACAAAGTACAGCCCTTGGTaGTGTGACAAGACCACCTTG +
Preference number: 5 (lower is better)
Translates to: GRSASWPLHYHPVLPGATKYSPW*CDKTTL
Trigger: CAAGGTGGTCTTGTCACACAACCAAGGGCTGTACTT...TGTGGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp AAGGCAACAAGGCGTCGCACTGTGTGGTTGATGGGGCGGCCCAATAACCCCGCCATGGCCAGGATGTTTTaGTACAAGTACAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: KATRRRTVWLMGRPNNPAMARMF*YKYSPW
Trigger: CCAAGGGCTGTACTTGTACAAAAACATCCTGGCCAT...GGCGGGGTTATTGGGCCGCCCCATCAACCACACAGTGCGACGCCTTGTTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp AGGCTCAAAAGGGTGAAAGGTGAAGGCAACAAGGCGTCGCACTGTGTGGTTGATGCCTGGATCTCAAACTaGAGCAGGCCCGAGTCCCGG +
Preference number: 5 (lower is better)
Translates to: RLKRVKGEGNKASHCVVDAWISN*SRPESR
Trigger: CCGGGACTCGGGCCTGCTCAAGTTTGAGATCCAGGC...ATCAACCACACAGTGCGACGCCTTGTTGCCTTCACCTTTCACCCTTTTGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS TCA 90 bp CAACACAGGCTCTTATCCATGTTTTCGCCTGTTCCCTCTGCCTCCTaGCCAATCCAGGTGCTTACCCATGGCCCTGCATGCATACCACGC +
Preference number: 5 (lower is better)
Translates to: QHRLLSMFSPVPSAS*PIQVLTHGPACIPR
Trigger: GCGTGGTATGCATGCAGGGCCATGGGTAAGCACCTGGATTGGTCAGGAGGCAGAGGGAACAGGCGAAAACATGGATAAGAGCCTGTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS CCA 90 bp CAAAGAGCCGGCCCCGGATATTCACTGACCGCTGGTCATTGCCATTaGACAGGATTTCTCCTTCGTATCCCTGCAGTAGGTCCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: QRAGPGYSLTAGHCH*TGFLLRIPAVGPLL
Trigger: CAGCAGAGGACCTACTGCAGGGATACGAAGGAGAAATCCTGTCCAATGGCAATGACCAGCGGTCAGTGAATATCCGGGGCCGGCTCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
ENST00000564406.5
CDS-3UTR CAA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGACAGTGGGTACCTGCCTaGCCTGAACTGATCCGCCGG +
Preference number: 5 (lower is better)
Translates to: AGTNRASSRELLLWSPLRQWVPA*PELIRR
Trigger: CCGGCGGATCAGTTCAGGCAAGGCAGGTACCCACTG...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR CAA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAGCCTGGATCTCAAACTaGAGCAGGCCCGAGTCCCGG +
Preference number: 5 (lower is better)
Translates to: AGTNRASSRELLLWSPLRAWISN*SRPESR
Trigger: CCGGGACTCGGGCCTGCTCAAGTTTGAGATCCAGGC...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACCGTCGCACTGTGTGGTaGATGGGGCGGCCCAATAAC +
Preference number: 5 (lower is better)
Translates to: SRLELTELVVGSFCFGVHRRTVW*MGRPNN
Trigger: GTTATTGGGCCGCCCCATCAACCACACAGTGCGACG...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS GCA 90 bp AGCGTTCAAAGAGCCGGCCCCGGATATTCACTGACCGCTGGTCATTaGCATTGGACAGGATTTCTCCTTCGTATCCCTGCAGTAGGTCCT +
Preference number: 5 (lower is better)
Translates to: SVQRAGPGYSLTAGH*HWTGFLLRIPAVGP
Trigger: AGGACCTACTGCAGGGATACGAAGGAGAAATCCTGTCCAATGGCAATGACCAGCGGTCAGTGAATATCCGGGGCCGGCTCTTTGAACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
ENST00000564406.5
CDS GCA 90 bp TATCTGTCCCACCATACCAGAGAGCAGGGAACTGGTCTAATTCCTTaGTGTATTCCCAGCACCTGTCTGGTCCGGGCTCAAAGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: YLSHHTREQGTGLIP*CIPSTCLVRAQRAR
Trigger: CCTGGCTCTTTGAGCCCGGACCAGACAGGTGCTGGGAATACAGCAAGGAATTAGACCAGTTCCCTGCTCTCTGGTATGGTGGGACAGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564406.5
CDS GCA 90 bp ATGTGTGCTACTGCCAGGCAGCAACTGCTGACAACTCGCCTGGGGTaGTGCAAATGCTCCCTGCAGGAGGTGAAACTTCAGCATCAAAGA +
Preference number: 5 (lower is better)
Translates to: MCATARQQLLTTRLG*CKCSLQEVKLQHQR
Trigger: TCTTTGATGCTGAAGTTTCACCTCCTGCAGGGAGCATTTGCAGCACCCCAGGCGAGTTGTCAGCAGTTGCTGCCTGGCAGTAGCACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS GCA 90 bp AGCCTTCGAGCTCCACTTCTGCTCACTAGAGTTAATGTGTGCTACTaGCAGGCAGCAACTGCTGACAACTCGCCTGGGGTGCTGCAAATG +
Preference number: 5 (lower is better)
Translates to: SLRAPLLLTRVNVCY*QAATADNSPGVLQM
Trigger: CATTTGCAGCACCCCAGGCGAGTTGTCAGCAGTTGCTGCCTGGCAGTAGCACACATTAACTCTAGTGAGCAGAAGTGGAGCTCGAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS-3UTR CAA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACATGGAACACTCGGACTaGGTGCCAGTGGGTACCTGC +
Preference number: 5 (lower is better)
Translates to: SRLELTELVVGSFCFGVHMEHSD*VPVGTC
Trigger: GCAGGTACCCACTGGCACCAAGTCCGAGTGTTCCAT...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR CAA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAAGAGGGGACCGTGGGTaGGGGGTCACTGATTCACTG +
Preference number: 5 (lower is better)
Translates to: AGTNRASSRELLLWSPLRRGDRG*GVTDSL
Trigger: CAGTGAATCAGTGACCCCCAACCCACGGTCCCCTCT...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp CGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAAGGATCCCGTCGCACTGTGTGGTaGATGGGGCGGCCCAATAAC +
Preference number: 5 (lower is better)
Translates to: RRHKYTSNRCLRELMKGSRRTVW*MGRPNN
Trigger: GTTATTGGGCCGCCCCATCAACCACACAGTGCGACG...GGATCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGACGTCGCACTGTGTGGTaGATGGGGCGGCCCAATAAC +
Preference number: 5 (lower is better)
Translates to: AGTNRASSRELLLWSPLRRRTVW*MGRPNN
Trigger: GTTATTGGGCCGCCCCATCAACCACACAGTGCGACG...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS GCA 90 bp AGCAGGAAGCCTCAGTTCCTCAGCAAGGAGATCTCTCCAGGAGCTTaGCTGTGTGTTCTTGTGATATGGCGGCTGAATGATTCCAGGGGT +
Preference number: 5 (lower is better)
Translates to: SRKPQFLSKEISPGA*LCVLVIWRLNDSRG
Trigger: ACCCCTGGAATCATTCAGCCGCCATATCACAAGAACACACAGGCAAGCTCCTGGAGAGATCTCCTTGCTGAGGAACTGAGGCTTCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS-3UTR CAA 90 bp GGCATAGAACCTGATTGGGTGATCTCCACAAGTCTTGGGCCGCTCCATGACAGACCATTGGCCGCAACATaGGTAATGTGCAGCAGGACA +
Preference number: 5 (lower is better)
Translates to: GIEPDWVISTSLGPLHDRPLAAT*VMCSRT
Trigger: TGTCCTGCTGCACATTACCAATGTTGCGGCCAATGG...TCTGTCATGGAGCGGCCCAAGACTTGTGGAGATCACCCAATCAGGTTCTATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp AAGAAGCGCCTCTTGGCCATTGCACTACCATCCTGTTCTGCCCGGCGCCACAAAACCAGCAACCGGTGTTaGAGGGAATTGATGAAAGGA +
Preference number: 5 (lower is better)
Translates to: KKRLLAIALPSCSARRHKTSNRC*RELMKG
Trigger: TCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGT...TTTGTGGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGGAAGAAGCGCCTCTaGGCCATTGCACTACCATCC +
Preference number: 5 (lower is better)
Translates to: SRLELTELVVGSFCFGVHWKKRL*AIALPS
Trigger: GGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCCA...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp CAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAAAGTGCCAAGAGATGTCTGGTCTaGCCTGAACTGATCCGCCGG +
Preference number: 5 (lower is better)
Translates to: QVILIAKAANGPHINESAKRCLV*PELIRR
Trigger: CCGGCGGATCAGTTCAGGCAAGACCAGACATCTCTT...GGCACTTTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCCAGTGGGTACCTGCCTaGCCTGAACTGATCCGCCGG +
Preference number: 5 (lower is better)
Translates to: MLGIPTGKTQEDIITISSQWVPA*PELIRR
Trigger: CCGGCGGATCAGTTCAGGCAAGGCAGGTACCCACTG...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR CAA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACCCATTGGCCGCAACATaGGTAATGTGCAGCAGGACA +
Preference number: 5 (lower is better)
Translates to: SRLELTELVVGSFCFGVHPLAAT*VMCSRT
Trigger: TGTCCTGCTGCACATTACCAATGTTGCGGCCAATGG...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCGCCTGGATCTCAAACTaGAGCAGGCCCGAGTCCCGG +
Preference number: 5 (lower is better)
Translates to: MLGIPTGKTQEDIITISSAWISN*SRPESR
Trigger: CCGGGACTCGGGCCTGCTCAAGTTTGAGATCCAGGC...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS TCA 90 bp TGGGTACCTGCCTTGCCTGAACTGATCCGCCGGCGTTCCAAGCGGTaGATGACATTTTGGTTTTGGATTCTTCGAGGCTTGATGGTAGAA +
Preference number: 5 (lower is better)
Translates to: WVPALPELIRRRSKR*MTFWFWILRGLMVE
Trigger: TTCTACCATCAAGCCTCGAAGAATCCAAAACCAAAATGTCATTCACCGCTTGGAACGCCGGCGGATCAGTTCAGGCAAGGCAGGTACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS TCA 90 bp GTCTGGTCTGCCTTGCCTGAACTGATCCGCCGGCGTTCCAAGCGGTaGATGACATTTTGGTTTTGGATTCTTCGAGGCTTGATGGTAGAA +
Preference number: 5 (lower is better)
Translates to: VWSALPELIRRRSKR*MTFWFWILRGLMVE
Trigger: TTCTACCATCAAGCCTCGAAGAATCCAAAACCAAAATGTCATTCACCGCTTGGAACGCCGGCGGATCAGTTCAGGCAAGGCAGACCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558413.1
CDS GCA 90 bp ACTGCCAGGCAGCAACTGCTGACAACTCGCCTGGGGTGCTGCAAATaGTCCCTGCAGGAGGTGAAACTTCAGCATCAAAGAATTAATGAA +
Preference number: 5 (lower is better)
Translates to: TARQQLLTTRLGCCK*SLQEVKLQHQRINE
Trigger: TTCATTAATTCTTTGATGCTGAAGTTTCACCTCCTGCAGGGAGCATTTGCAGCACCCCAGGCGAGTTGTCAGCAGTTGCTGCCTGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS CCA 90 bp CATCTCTTTTTAGTATCTGTCCCACCATACCAGAGAGCAGGGAACTaGTCTAATTCCTTGCTGTATTCCCAGCACCTGTCTGGTCCGGGC +
Preference number: 5 (lower is better)
Translates to: HLFLVSVPPYQRAGN*SNSLLYSQHLSGPG
Trigger: GCCCGGACCAGACAGGTGCTGGGAATACAGCAAGGAATTAGACCAGTTCCCTGCTCTCTGGTATGGTGGGACAGATACTAAAAAGAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564406.5
CDS CCA 90 bp TTAATGACTACACTTAGAAGAGAAACAGTACTTGGAGACCAGATCTaGGGTCCCAGGAAGCAGAACAGGCTGGGCCAGGAAGAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: LMTTLRRETVLGDQI*GPRKQNRLGQEEQL
Trigger: GAGCTGCTCTTCCTGGCCCAGCCTGTTCTGCTTCCTGGGACCCCAGATCTGGTCTCCAAGTACTGTTTCTCTTCTAAGTGTAGTCATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS-3UTR CAA 90 bp TCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAACGCTGGTCATTGCCATaGGACAGGATTTCTCCTTCG +
Preference number: 5 (lower is better)
Translates to: SARRHKYTSNRCLRELMKRWSLP*DRISPS
Trigger: CGAAGGAGAAATCCTGTCCAATGGCAATGACCAGCG...TTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR CAA 90 bp GAGCAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAAAGTCGCTGGTCATTGCCATaGGACAGGATTTCTCCTTCG +
Preference number: 5 (lower is better)
Translates to: EQVILIAKAANGPHINESRWSLP*DRISPS
Trigger: CGAAGGAGAAATCCTGTCCAATGGCAATGACCAGCG...ACTTTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR CAA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACACTGACCGCTGGTCATaGCCATTGGACAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: SRLELTELVVGSFCFGVHTDRWS*PLDRIS
Trigger: AGAAATCCTGTCCAATGGCAATGACCAGCGGTCAGT...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp AGAGGGGACCGTGGGTTGGGGGTCACTGATTCACTGTTCCGATATACCTCAAAAACTGACCGCTGGTCATaGCCATTGGACAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: RGDRGLGVTDSLFRYTSKTDRWS*PLDRIS
Trigger: AGAAATCCTGTCCAATGGCAATGACCAGCGGTCAGT...TTTTGAGGTATATCGGAACAGTGAATCAGTGACCCCCAACCCACGGTCCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp AGGCTCAAAAGGGTGAAAGGTGAAGGCAACAAGGCGTCGCACTGTGTGGTTGATACTGACCGCTGGTCATaGCCATTGGACAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: RLKRVKGEGNKASHCVVDTDRWS*PLDRIS
Trigger: AGAAATCCTGTCCAATGGCAATGACCAGCGGTCAGT...ATCAACCACACAGTGCGACGCCTTGTTGCCTTCACCTTTCACCCTTTTGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp CTGTTCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATACTGACCGCTGGTCATaGCCATTGGACAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: LFCPAPQIYQQPVFEGIDTDRWS*PLDRIS
Trigger: AGAAATCCTGTCCAATGGCAATGACCAGCGGTCAGT...ATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR CAA 90 bp TTCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAACCATTGGCCGCAACATaGGTAATGTGCAGCAGGACA +
Preference number: 5 (lower is better)
Translates to: FCPAPQIYQQPVFEGIDEPLAAT*VMCSRT
Trigger: TGTCCTGCTGCACATTACCAATGTTGCGGCCAATGG...TTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR CAA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTTCAGGTGCTCACCATaGGCCGCAACATTGGTAATG +
Preference number: 5 (lower is better)
Translates to: SRLELTELVVGSFCFGVHFRCSP*AATLVM
Trigger: CATTACCAATGTTGCGGCCAATGGTGAGCACCTGAA...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp TCTGTTGTTGCACAGACAAGATGGCCAGGATGTTTTTGTACAAGTACAGCCCTTAGAGGGGACCGTGGGTaGGGGGTCACTGATTCACTG +
Preference number: 5 (lower is better)
Translates to: SVVAQTRWPGCFCTSTALRGDRG*GVTDSL
Trigger: CAGTGAATCAGTGACCCCCAACCCACGGTCCCCTCT...AAGGGCTGTACTTGTACAAAAACATCCTGGCCATCTTGTCTGTGCAACAACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGTGACAAGACCACCTaGTCACACTTGAACGTGCGT +
Preference number: 5 (lower is better)
Translates to: SRLELTELVVGSFCFGVHCDKTT*SHLNVR
Trigger: ACGCACGTTCAAGTGTGACAAGGTGGTCTTGTCACA...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACATGGATGGTCTGTTGTaGCACAGACAAGATGGCCAG +
Preference number: 5 (lower is better)
Translates to: SRLELTELVVGSFCFGVHMDGLL*HRQDGQ
Trigger: CTGGCCATCTTGTCTGTGCAACAACAGACCATCCAT...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTCGCAGCTGCCGCAGTaGGTCAAAATACTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: SRLELTELVVGSFCFGVHSQLPQ*VKILEE
Trigger: TTCTTCCAGTATTTTGACCAACTGCGGCAGCTGCGA...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCCGTCGCACTGTGTGGTaGATGGGGCGGCCCAATAAC +
Preference number: 5 (lower is better)
Translates to: MLGIPTGKTQEDIITISSRRTVW*MGRPNN
Trigger: GTTATTGGGCCGCCCCATCAACCACACAGTGCGACG...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp GAAGTTGACAACATACTCAGCATTAGTCCTCTGCACAGAAATAGCGAAAGGCTCCGTCGCACTGTGTGGTaGATGGGGCGGCCCAATAAC +
Preference number: 5 (lower is better)
Translates to: EVDNILSISPLHRNSERLRRTVW*MGRPNN
Trigger: GTTATTGGGCCGCCCCATCAACCACACAGTGCGACG...GAGCCTTTCGCTATTTCTGTGCAGAGGACTAATGCTGAGTATGTTGTCAACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp CAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAAAGTGCCAGTAGTCGGGAGCTTTaGCTTTGGAGTCCACTGAGA +
Preference number: 5 (lower is better)
Translates to: QVILIAKAANGPHINESASSREL*LWSPLR
Trigger: TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACT...GGCACTTTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp CAGCCGGCGTACTGCCTCTGTGTGCCCTCCATACTTGGCATTTATAATAGTGTCCATACTTCCATGCCTTaGTATATGCTGGGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: QPAYCLCVPSILGIYNSVHTSMP*YMLGLS
Trigger: GGAGAGGCCCAGCATATACAAAGGCATGGAAGTATG...GACACTATTATAAATGCCAAGTATGGAGGGCACACAGAGGCAGTACGCCGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR CAA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAGGAGGCTTTTCAACGTaGACAACTGTGAAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: AGTNRASSRELLLWSPLRGGFST*TTVKLG
Trigger: CCCCAACTTCACAGTTGTCAACGTTGAAAAGCCTCC...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR CAA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGATTCAGGTGCTCACCATaGGCCGCAACATTGGTAATG +
Preference number: 5 (lower is better)
Translates to: AGTNRASSRELLLWSPLRFRCSP*AATLVM
Trigger: CATTACCAATGTTGCGGCCAATGGTGAGCACCTGAA...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp AGTGAGCAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAATTCAGGTGCTCACCATaGGCCGCAACATTGGTAATG +
Preference number: 5 (lower is better)
Translates to: SEQVILIAKAANGPHINEFRCSP*AATLVM
Trigger: CATTACCAATGTTGCGGCCAATGGTGAGCACCTGAA...TTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTGCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACACCACCTTGTCACACTaGAACGTGCGTGTATCACAT +
Preference number: 5 (lower is better)
Translates to: SRLELTELVVGSFCFGVHTTLSH*NVRVSH
Trigger: ATGTGATACACGCACGTTCAAGTGTGACAAGGTGGT...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGATGTGACAAGACCACCTaGTCACACTTGAACGTGCGT +
Preference number: 5 (lower is better)
Translates to: AGTNRASSRELLLWSPLRCDKTT*SHLNVR
Trigger: ACGCACGTTCAAGTGTGACAAGGTGGTCTTGTCACA...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAAAGTACAGCCCTTGGTaGTGTGACAAGACCACCTTG +
Preference number: 5 (lower is better)
Translates to: AGTNRASSRELLLWSPLRKYSPW*CDKTTL
Trigger: CAAGGTGGTCTTGTCACACAACCAAGGGCTGTACTT...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp CCAGATAATCTGGCTCTGGTGAGGCACCTACGTGCAGCAGTGTCGCATATGGAACGGTGTTTGAGGGAATaGATGAAAGGATCCCTAAAG +
Preference number: 5 (lower is better)
Translates to: PDNLALVRHLRAAVSHMERCLRE*MKGSLK
Trigger: CTTTAGGGATCCTTTCATCAATTCCCTCAAACACCG...TTCCATATGCGACACTGCTGCACGTAGGTGCCTCACCAGAGCCAGATTATCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp CAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAAAGTGCCACCAGCAACCGGTGTTaGAGGGAATTGATGAAAGGA +
Preference number: 5 (lower is better)
Translates to: QVILIAKAANGPHINESATSNRC*RELMKG
Trigger: TCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGT...GGCACTTTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR CAA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACACCAGCAACCGGTGTTaGAGGGAATTGATGAAAGGA +
Preference number: 5 (lower is better)
Translates to: SRLELTELVVGSFCFGVHTSNRC*RELMKG
Trigger: TCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGT...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp TTCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAATCGCAGCTGCCGCAGTaGGTCAAAATACTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: FCPAPQIYQQPVFEGIDESQLPQ*VKILEE
Trigger: TTCTTCCAGTATTTTGACCAACTGCGGCAGCTGCGA...TTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp AGGCTCAAAAGGGTGAAAGGTGAAGGCAACAAGGCGTCGCACTGTGTGGTTGATTGCCTTGCAAAATTGTaGCTAGAAGCTGAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: RLKRVKGEGNKASHCVVDCLAKL*LEAEQG
Trigger: TCCCTGCTCAGCTTCTAGCAACAATTTTGCAAGGCA...ATCAACCACACAGTGCGACGCCTTGTTGCCTTCACCTTTCACCCTTTTGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR CAA 90 bp AAGAAGCGCCTCTTGGCCATTGCACTACCATCCTGTTCTGCCCGGCGCCACAAATGTCGCATATGGAAGTaGACAACATACTCAGCATTA +
Preference number: 5 (lower is better)
Translates to: KKRLLAIALPSCSARRHKCRIWK*TTYSAL
Trigger: TAATGCTGAGTATGTTGTCAACTTCCATATGCGACA...TTTGTGGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAAGTAGTCGGGAGCTTTaGCTTTGGAGTCCACTGAGA +
Preference number: 5 (lower is better)
Translates to: AGTNRASSRELLLWSPLRSSREL*LWSPLR
Trigger: TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACT...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS TCA 90 bp AGATGTCTGGTCTTGCCTGAACTGATCCGCCGGCGTTCCAAGCGGTaGATGACATTTTGGTTTTGGATTCTTCGAGGCTTGATGGTAGAA +
Preference number: 5 (lower is better)
Translates to: RCLVLPELIRRRSKR*MTFWFWILRGLMVE
Trigger: TTCTACCATCAAGCCTCGAAGAATCCAAAACCAAAATGTCATTCACCGCTTGGAACGCCGGCGGATCAGTTCAGGCAAGACCAGACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS GCA 90 bp CCCAGTTTGCACATCCACAGGCGACGAGAACAGCAATGTTGCAACTaGTGCCTTGCTGACACTGAGAAGACACCAACTTTAAGATACACT +
Preference number: 5 (lower is better)
Translates to: PSLHIHRRREQQCCN*CLADTEKTPTLRYT
Trigger: AGTGTATCTTAAAGTTGGTGTCTTCTCAGTGTCAGCAAGGCAGCAGTTGCAACATTGCTGTTCTCGTCGCCTGTGGATGTGCAAACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS CCA 90 bp AGCCGCCCAACACTCAGCTTTCTTGTTAACTCCATACTCAAAGACTaGTTTCCTGGTTCCCTTACTGATGGTGGGACAGTTGAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: SRPTLSFLVNSILKD*FPGSLTDGGTVERE
Trigger: CTCTCTCTCAACTGTCCCACCATCAGTAAGGGAACCAGGAAACCAGTCTTTGAGTATGGAGTTAACAAGAAAGCTGAGTGTTGGGCGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS-3UTR CAA 90 bp CTGTTCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGCGGTGAATGACATTTaGGTTTTGGATTCTTCGAGG +
Preference number: 5 (lower is better)
Translates to: LFCPAPQIYQQPVFEGIDAVNDI*VLDSSR
Trigger: CCTCGAAGAATCCAAAACCAAAATGTCATTCACCGC...ATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR CAA 90 bp CCACTTGTCATCATAACTGAAGAGAGACAAATCCAGATAGGGGCTACCGCTGTACGCTGGTCATTGCCATaGGACAGGATTTCTCCTTCG +
Preference number: 5 (lower is better)
Translates to: PLVIITEERQIQIGATAVRWSLP*DRISPS
Trigger: CGAAGGAGAAATCCTGTCCAATGGCAATGACCAGCG...TACAGCGGTAGCCCCTATCTGGATTTGTCTCTCTTCAGTTATGATGACAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAACCACCTTGTCACACTaGAACGTGCGTGTATCACAT +
Preference number: 5 (lower is better)
Translates to: AGTNRASSRELLLWSPLRTTLSH*NVRVSH
Trigger: ATGTGATACACGCACGTTCAAGTGTGACAAGGTGGT...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp ATGGCCAGGATGTTTTTGTACAAGTACAGCCCTTGGTTGTGTGACAAGACCACCAAGTACAGCCCTTGGTaGTGTGACAAGACCACCTTG +
Preference number: 5 (lower is better)
Translates to: MARMFLYKYSPWLCDKTTKYSPW*CDKTTL
Trigger: CAAGGTGGTCTTGTCACACAACCAAGGGCTGTACTT...GGTGGTCTTGTCACACAACCAAGGGCTGTACTTGTACAAAAACATCCTGGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAATGGCCAGGATGTTTTaGTACAAGTACAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: AGTNRASSRELLLWSPLRMARMF*YKYSPW
Trigger: CCAAGGGCTGTACTTGTACAAAAACATCCTGGCCAT...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp CAGGTCATCCTCATAGCAAAAGCGGCCAATGGTCCGCACATCAATGAAAGTGCCCGGTGTTTGAGGGAATaGATGAAAGGATCCCTAAAG +
Preference number: 5 (lower is better)
Translates to: QVILIAKAANGPHINESARCLRE*MKGSLK
Trigger: CTTTAGGGATCCTTTCATCAATTCCCTCAAACACCG...GGCACTTTCATTGATGTGCGGACCATTGGCCGCTTTTGCTATGAGGATGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR CAA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACCGGTGTTTGAGGGAATaGATGAAAGGATCCCTAAAG +
Preference number: 5 (lower is better)
Translates to: SRLELTELVVGSFCFGVHRCLRE*MKGSLK
Trigger: CTTTAGGGATCCTTTCATCAATTCCCTCAAACACCG...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCTGGAAGAAGCGCCTCTaGGCCATTGCACTACCATCC +
Preference number: 5 (lower is better)
Translates to: MLGIPTGKTQEDIITISSWKKRL*AIALPS
Trigger: GGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCCA...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp ACGCCTGGCCTGAAGTCTAAGTTTGAATTCTGGCTCCAGCTTTGTGACTTTCAGTCGCAGCTGCCGCAGTaGGTCAAAATACTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: TPGLKSKFEFWLQLCDFQSQLPQ*VKILEE
Trigger: TTCTTCCAGTATTTTGACCAACTGCGGCAGCTGCGA...CTGAAAGTCACAAAGCTGGAGCCAGAATTCAAACTTAGACTTCAGGCCAGGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR CAA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGATGCCTTGCAAAATTGTaGCTAGAAGCTGAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: AGTNRASSRELLLWSPLRCLAKL*LEAEQG
Trigger: TCCCTGCTCAGCTTCTAGCAACAATTTTGCAAGGCA...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp CTGTTCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATTTTATAATAGTGTCTTaGAACCGGCGCTGGATCTGC +
Preference number: 5 (lower is better)
Translates to: LFCPAPQIYQQPVFEGIDFIIVS*NRRWIC
Trigger: GCAGATCCAGCGCCGGTTCAAAGACACTATTATAAA...ATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR CAA 90 bp CGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAAGGATCCTCGGGAGCTTTTGCTTaGGAGTCCACTGAGATAAGT +
Preference number: 5 (lower is better)
Translates to: RRHKYTSNRCLRELMKGSSGAFA*ESTEIS
Trigger: ACTTATCTCAGTGGACTCCAAAGCAAAAGCTCCCGA...GGATCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp ATGGCCAGGATGTTTTTGTACAAGTACAGCCCTTGGTTGTGTGACAAGACCACCAGTAGTCGGGAGCTTTaGCTTTGGAGTCCACTGAGA +
Preference number: 5 (lower is better)
Translates to: MARMFLYKYSPWLCDKTTSSREL*LWSPLR
Trigger: TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACT...GGTGGTCTTGTCACACAACCAAGGGCTGTACTTGTACAAAAACATCCTGGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCAAGAGATGTCTGGTCTaGCCTGAACTGATCCGCCGG +
Preference number: 5 (lower is better)
Translates to: MLGIPTGKTQEDIITISSKRCLV*PELIRR
Trigger: CCGGCGGATCAGTTCAGGCAAGACCAGACATCTCTT...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp GCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAAGGATCCCTCTTCAGGAGTCACCATaGGCCGCAACATTGGTAATG +
Preference number: 5 (lower is better)
Translates to: APQIYQQPVFEGIDERIPLQESP*AATLVM
Trigger: CATTACCAATGTTGCGGCCAATGGTGACTCCTGAAG...AGGGATCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558413.1
CDS GCA 90 bp AGTTTGCACATCCACAGGCGACGAGAACAGCAATGTTGCAACTGCTaGCTTGCTGACACTGAGAAGACACCAACTTTAAGATACACTCCA +
Preference number: 5 (lower is better)
Translates to: SLHIHRRREQQCCNC*LADTEKTPTLRYTP
Trigger: TGGAGTGTATCTTAAAGTTGGTGTCTTCTCAGTGTCAGCAAGGCAGCAGTTGCAACATTGCTGTTCTCGTCGCCTGTGGATGTGCAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS-3UTR CAA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAGCGGTGAATGACATTTaGGTTTTGGATTCTTCGAGG +
Preference number: 5 (lower is better)
Translates to: AGTNRASSRELLLWSPLRAVNDI*VLDSSR
Trigger: CCTCGAAGAATCCAAAACCAAAATGTCATTCACCGC...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp CGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAAGGATCCGCGGTGAATGACATTTaGGTTTTGGATTCTTCGAGG +
Preference number: 5 (lower is better)
Translates to: RRHKYTSNRCLRELMKGSAVNDI*VLDSSR
Trigger: CCTCGAAGAATCCAAAACCAAAATGTCATTCACCGC...GGATCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR CAA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACATGGAACACTCGGACTaGGTGCCAGTGGGTACCTGC +
Preference number: 5 (lower is better)
Translates to: DLINAGHSHRENARGYYNMEHSD*VPVGTC
Trigger: GCAGGTACCCACTGGCACCAAGTCCGAGTGTTCCAT...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR CAA 90 bp CTTGTCATCATAACTGAAGAGAGACAAATCCAGATAGGGGCTACCGCTGTAAGACCATTGGCCGCAACATaGGTAATGTGCAGCAGGACA +
Preference number: 5 (lower is better)
Translates to: LVIITEERQIQIGATAVRPLAAT*VMCSRT
Trigger: TGTCCTGCTGCACATTACCAATGTTGCGGCCAATGG...TCTTACAGCGGTAGCCCCTATCTGGATTTGTCTCTCTTCAGTTATGATGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp GGAAGACATGGATGGTCTGTTGTTGCACAGACAAGATGGCCAGGATGTTTTTGTTGTGACAAGACCACCTaGTCACACTTGAACGTGCGT +
Preference number: 5 (lower is better)
Translates to: GRHGWSVVAQTRWPGCFCCDKTT*SHLNVR
Trigger: ACGCACGTTCAAGTGTGACAAGGTGGTCTTGTCACA...ACAAAAACATCCTGGCCATCTTGTCTGTGCAACAACAGACCATCCATGTCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp ATGGCCAGGATGTTTTTGTACAAGTACAGCCCTTGGTTGTGTGACAAGACCACCATGGCCAGGATGTTTTaGTACAAGTACAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: MARMFLYKYSPWLCDKTTMARMF*YKYSPW
Trigger: CCAAGGGCTGTACTTGTACAAAAACATCCTGGCCAT...GGTGGTCTTGTCACACAACCAAGGGCTGTACTTGTACAAAAACATCCTGGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp GCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAAGGATCCCTACCAGCAACCGGTGTTaGAGGGAATTGATGAAAGGA +
Preference number: 5 (lower is better)
Translates to: APQIYQQPVFEGIDERIPTSNRC*RELMKG
Trigger: TCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGT...AGGGATCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR CAA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGAAAAAATTCCATTAGGTaGAGCCACCCTCACTCCTCT +
Preference number: 5 (lower is better)
Translates to: AGTNRASSRELLLWSPLRKNSIR*SHPHSS
Trigger: AGAGGAGTGAGGGTGGCTCAACCTAATGGAATTTTT...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp CGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATGAAAGGATCCAAAAATTCCATTAGGTaGAGCCACCCTCACTCCTCT +
Preference number: 5 (lower is better)
Translates to: RRHKYTSNRCLRELMKGSKNSIR*SHPHSS
Trigger: AGAGGAGTGAGGGTGGCTCAACCTAATGGAATTTTT...GGATCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp TCCACATTCGCAGCTGCCGCAGTTGGTCAAAATACTGGAAGAAGCGCCTCTTGGAAACATCTTCAACTCTaGGTCATACAACACATTCCC +
Preference number: 5 (lower is better)
Translates to: STFAAAAVGQNTGRSASWKHLQL*VIQHIP
Trigger: GGGAATGTGTTGTATGACCAAGAGTTGAAGATGTTT...CCAAGAGGCGCTTCTTCCAGTATTTTGACCAACTGCGGCAGCTGCGAATGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR CAA 90 bp TCCACATTCGCAGCTGCCGCAGTTGGTCAAAATACTGGAAGAAGCGCCTCTTGGAATGACATTTTGGTTTaGGATTCTTCGAGGCTTGAT +
Preference number: 5 (lower is better)
Translates to: STFAAAAVGQNTGRSASWNDILV*DSSRLD
Trigger: ATCAAGCCTCGAAGAATCCAAAACCAAAATGTCATT...CCAAGAGGCGCTTCTTCCAGTATTTTGACCAACTGCGGCAGCTGCGAATGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCACTGACCGCTGGTCATaGCCATTGGACAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: MLGIPTGKTQEDIITISSTDRWS*PLDRIS
Trigger: AGAAATCCTGTCCAATGGCAATGACCAGCGGTCAGT...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp CTTGTCATCATAACTGAAGAGAGACAAATCCAGATAGGGGCTACCGCTGTAAGATTCAGGTGCTCACCATaGGCCGCAACATTGGTAATG +
Preference number: 5 (lower is better)
Translates to: LVIITEERQIQIGATAVRFRCSP*AATLVM
Trigger: CATTACCAATGTTGCGGCCAATGGTGAGCACCTGAA...TCTTACAGCGGTAGCCCCTATCTGGATTTGTCTCTCTTCAGTTATGATGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCTTCAGGTGCTCACCATaGGCCGCAACATTGGTAATG +
Preference number: 5 (lower is better)
Translates to: MLGIPTGKTQEDIITISSFRCSP*AATLVM
Trigger: CATTACCAATGTTGCGGCCAATGGTGAGCACCTGAA...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGAGAGGGGACCGTGGGTaGGGGGTCACTGATTCACTG +
Preference number: 5 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKRGDRG*GVTDSL
Trigger: CAGTGAATCAGTGACCCCCAACCCACGGTCCCCTCT...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCTGTGACAAGACCACCTaGTCACACTTGAACGTGCGT +
Preference number: 5 (lower is better)
Translates to: MLGIPTGKTQEDIITISSCDKTT*SHLNVR
Trigger: ACGCACGTTCAAGTGTGACAAGGTGGTCTTGTCACA...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCATGGATGGTCTGTTGTaGCACAGACAAGATGGCCAG +
Preference number: 5 (lower is better)
Translates to: MLGIPTGKTQEDIITISSMDGLL*HRQDGQ
Trigger: CTGGCCATCTTGTCTGTGCAACAACAGACCATCCAT...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAGCGCCTCTTGGCCATaGCACTACCATCCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: DLINAGHSHRENARGYYNSASWP*HYHPVL
Trigger: CAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCT...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp CATATGGAAGTTGACAACATACTCAGCATTAGTCCTCTGCACAGAAATAGCGAATGGAAGAAGCGCCTCTaGGCCATTGCACTACCATCC +
Preference number: 5 (lower is better)
Translates to: HMEVDNILSISPLHRNSEWKKRL*AIALPS
Trigger: GGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCCA...TTCGCTATTTCTGTGCAGAGGACTAATGCTGAGTATGTTGTCAACTTCCATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACTGGAAGAAGCGCCTCTaGGCCATTGCACTACCATCC +
Preference number: 5 (lower is better)
Translates to: DLINAGHSHRENARGYYNWKKRL*AIALPS
Trigger: GGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCCA...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp AGCAGGCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGTCGCATATGGAAGTaGACAACATACTCAGCATTA +
Preference number: 5 (lower is better)
Translates to: SRLELTELVVGSFCFGVHCRIWK*TTYSAL
Trigger: TAATGCTGAGTATGTTGTCAACTTCCATATGCGACA...GTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp ATGGCCAGGATGTTTTTGTACAAGTACAGCCCTTGGTTGTGTGACAAGACCACCAAAAATTCCATTAGGTaGAGCCACCCTCACTCCTCT +
Preference number: 5 (lower is better)
Translates to: MARMFLYKYSPWLCDKTTKNSIR*SHPHSS
Trigger: AGAGGAGTGAGGGTGGCTCAACCTAATGGAATTTTT...GGTGGTCTTGTCACACAACCAAGGGCTGTACTTGTACAAAAACATCCTGGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp CAGCCGGCGTACTGCCTCTGTGTGCCCTCCATACTTGGCATTTATAATAGTGTCCTGGAACCCAAGTACTaGAAAGCATTGAGTATGATA +
Preference number: 5 (lower is better)
Translates to: QPAYCLCVPSILGIYNSVLEPKY*KALSMI
Trigger: TATCATACTCAATGCTTTCAAGTACTTGGGTTCCAG...GACACTATTATAAATGCCAAGTATGGAGGGCACACAGAGGCAGTACGCCGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR CAA 90 bp CAGCCGGCGTACTGCCTCTGTGTGCCCTCCATACTTGGCATTTATAATAGTGTCAATGACATTTTGGTTTaGGATTCTTCGAGGCTTGAT +
Preference number: 5 (lower is better)
Translates to: QPAYCLCVPSILGIYNSVNDILV*DSSRLD
Trigger: ATCAAGCCTCGAAGAATCCAAAACCAAAATGTCATT...GACACTATTATAAATGCCAAGTATGGAGGGCACACAGAGGCAGTACGCCGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp CTGTTCTGCCCGGCGCCACAAATATACCAGCAACCGGTGTTTGAGGGAATTGATAATGACATTTTGGTTTaGGATTCTTCGAGGCTTGAT +
Preference number: 5 (lower is better)
Translates to: LFCPAPQIYQQPVFEGIDNDILV*DSSRLD
Trigger: ATCAAGCCTCGAAGAATCCAAAACCAAAATGTCATT...ATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGTGGCGCCGGGCAGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
CDS-3UTR CAA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGATGGAACACTCGGACTaGGTGCCAGTGGGTACCTGC +
Preference number: 5 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKMEHSD*VPVGTC
Trigger: GCAGGTACCCACTGGCACCAAGTCCGAGTGTTCCAT...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR CAA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACCGCTGGTCATTGCCATaGGACAGGATTTCTCCTTCG +
Preference number: 5 (lower is better)
Translates to: DLINAGHSHRENARGYYNRWSLP*DRISPS
Trigger: CGAAGGAGAAATCCTGTCCAATGGCAATGACCAGCG...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCACCACCTTGTCACACTaGAACGTGCGTGTATCACAT +
Preference number: 5 (lower is better)
Translates to: MLGIPTGKTQEDIITISSTTLSH*NVRVSH
Trigger: ATGTGATACACGCACGTTCAAGTGTGACAAGGTGGT...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp GCTGGAACTAACAGAGCTAGTAGTCGGGAGCTTTTGCTTTGGAGTCCACTGAGATGTCGCATATGGAAGTaGACAACATACTCAGCATTA +
Preference number: 5 (lower is better)
Translates to: AGTNRASSRELLLWSPLRCRIWK*TTYSAL
Trigger: TAATGCTGAGTATGTTGTCAACTTCCATATGCGACA...TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACTAGCTCTGTTAGTTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp CTTGTCATCATAACTGAAGAGAGACAAATCCAGATAGGGGCTACCGCTGTAAGATCGGGAGCTTTTGCTTaGGAGTCCACTGAGATAAGT +
Preference number: 5 (lower is better)
Translates to: LVIITEERQIQIGATAVRSGAFA*ESTEIS
Trigger: ACTTATCTCAGTGGACTCCAAAGCAAAAGCTCCCGA...TCTTACAGCGGTAGCCCCTATCTGGATTTGTCTCTCTTCAGTTATGATGACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCTCGGGAGCTTTTGCTTaGGAGTCCACTGAGATAAGT +
Preference number: 5 (lower is better)
Translates to: MLGIPTGKTQEDIITISSSGAFA*ESTEIS
Trigger: ACTTATCTCAGTGGACTCCAAAGCAAAAGCTCCCGA...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp AGCTCCAAAAGCTCATCTGATGTATTCTCAAACACAGCAATCACCTCTGTCGTCATGCTGGGCCTCTCCTaGAAACATCTTCAACTCTTG +
Preference number: 5 (lower is better)
Translates to: SSKSSSDVFSNTAITSVVMLGLS*KHLQLL
Trigger: CAAGAGTTGAAGATGTTTCAAGGAGAGGCCCAGCAT...GACGACAGAGGTGATTGCTGTGTTTGAGAATACATCAGATGAGCTTTTGGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS TCA 90 bp GCATTCAGAGACATTACCAGACTAGAAAGGCAAAGGTTAGAGCTGTaGTTTACACATTCTTCTATTCCTAGTCCCTGGCCCTTAGCAGGT +
Preference number: 5 (lower is better)
Translates to: AFRDITRLERQRLEL*FTHSSIPSPWPLAG
Trigger: ACCTGCTAAGGGCCAGGGACTAGGAATAGAAGAATGTGTAAATCACAGCTCTAACCTTTGCCTTTCTAGTCTGGTAATGTCTCTGAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS GCA 90 bp TTCCTGGAGATAGCAAACAACTTGCCTGAGAACACGTCTTTCATATaGAAACCAACCAATCCAGAGCCCACACCTCAAGCACCTTTTTAT +
Preference number: 5 (lower is better)
Translates to: FLEIANNLPENTSFI*KPTNPEPTPQAPFY
Trigger: ATAAAAAGGTGCTTGAGGTGTGGGCTCTGGATTGGTTGGTTTGCATATGAAAGACGTGTTCTCAGGCAAGTTGTTTGCTATCTCCAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS-3UTR CAA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACATGGATGGTCTGTTGTaGCACAGACAAGATGGCCAG +
Preference number: 5 (lower is better)
Translates to: DLINAGHSHRENARGYYNMDGLL*HRQDGQ
Trigger: CTGGCCATCTTGTCTGTGCAACAACAGACCATCCAT...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp TATTCTCAAACACAGCAATCACCTCTGTCGTCACCATATTGTACACCACAAAGAATGGATGGTCTGTTGTaGCACAGACAAGATGGCCAG +
Preference number: 5 (lower is better)
Translates to: YSQTQQSPLSSPYCTPQRMDGLL*HRQDGQ
Trigger: CTGGCCATCTTGTCTGTGCAACAACAGACCATCCAT...TCTTTGTGGTGTACAATATGGTGACGACAGAGGTGATTGCTGTGTTTGAGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR CAA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCCGGTGTTTGAGGGAATaGATGAAAGGATCCCTAAAG +
Preference number: 5 (lower is better)
Translates to: MLGIPTGKTQEDIITISSRCLRE*MKGSLK
Trigger: CTTTAGGGATCCTTTCATCAATTCCCTCAAACACCG...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp TCTGTTGTTGCACAGACAAGATGGCCAGGATGTTTTTGTACAAGTACAGCCCTTCGGTGTTTGAGGGAATaGATGAAAGGATCCCTAAAG +
Preference number: 5 (lower is better)
Translates to: SVVAQTRWPGCFCTSTALRCLRE*MKGSLK
Trigger: CTTTAGGGATCCTTTCATCAATTCCCTCAAACACCG...AAGGGCTGTACTTGTACAAAAACATCCTGGCCATCTTGTCTGTGCAACAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS-3UTR CAA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGAGCGCCTCTTGGCCATaGCACTACCATCCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKSASWP*HYHPVL
Trigger: CAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCT...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCTTTATAATAGTGTCTTaGAACCGGCGCTGGATCTGC +
Preference number: 5 (lower is better)
Translates to: MLGIPTGKTQEDIITISSFIIVS*NRRWIC
Trigger: GCAGATCCAGCGCCGGTTCAAAGACACTATTATAAA...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp ACGCCTGGCCTGAAGTCTAAGTTTGAATTCTGGCTCCAGCTTTGTGACTTTCAGTGTCGCATATGGAAGTaGACAACATACTCAGCATTA +
Preference number: 5 (lower is better)
Translates to: TPGLKSKFEFWLQLCDFQCRIWK*TTYSAL
Trigger: TAATGCTGAGTATGTTGTCAACTTCCATATGCGACA...CTGAAAGTCACAAAGCTGGAGCCAGAATTCAAACTTAGACTTCAGGCCAGGCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR CAA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAGTAGTCGGGAGCTTTaGCTTTGGAGTCCACTGAGA +
Preference number: 5 (lower is better)
Translates to: DLINAGHSHRENARGYYNSSREL*LWSPLR
Trigger: TCTCAGTGGACTCCAAAGCAAAAGCTCCCGACTACT...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp AGCTCCAAAAGCTCATCTGATGTATTCTCAAACACAGCAATCACCTCTGTCGTCTACAACACATTCCCATaGATCCAACTCCAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: SSKSSSDVFSNTAITSVVYNTFP*IQLQCS
Trigger: AGAGCACTGGAGTTGGATCAATGGGAATGTGTTGTA...GACGACAGAGGTGATTGCTGTGTTTGAGAATACATCAGATGAGCTTTTGGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557842.6
CDS-3UTR CAA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGCGCTGGTCATTGCCATaGGACAGGATTTCTCCTTCG +
Preference number: 5 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKRWSLP*DRISPS
Trigger: CGAAGGAGAAATCCTGTCCAATGGCAATGACCAGCG...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACTGCCTTGCAAAATTGTaGCTAGAAGCTGAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: DLINAGHSHRENARGYYNCLAKL*LEAEQG
Trigger: TCCCTGCTCAGCTTCTAGCAACAATTTTGCAAGGCA...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACTCGGGAGCTTTTGCTTaGGAGTCCACTGAGATAAGT +
Preference number: 5 (lower is better)
Translates to: DLINAGHSHRENARGYYNSGAFA*ESTEIS
Trigger: ACTTATCTCAGTGGACTCCAAAGCAAAAGCTCCCGA...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAACTGGTCTAATTCCTaGCTGTATTCCCAGCACCTG +
Preference number: 5 (lower is better)
Translates to: DLINAGHSHRENARGYYNNWSNS*LYSQHL
Trigger: CAGGTGCTGGGAATACAGCAAGGAATTAGACCAGTT...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564406.5
CDS-3UTR CAA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGGGAGGCTTTTCAACGTaGACAACTGTGAAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKGGFST*TTVKLG
Trigger: CCCCAACTTCACAGTTGTCAACGTTGAAAAGCCTCC...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS-3UTR CAA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGAAGTACAGCCCTTGGTaGTGTGACAAGACCACCTTG +
Preference number: 5 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKKYSPW*CDKTTL
Trigger: CAAGGTGGTCTTGTCACACAACCAAGGGCTGTACTT...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGATGGATGGTCTGTTGTaGCACAGACAAGATGGCCAG +
Preference number: 5 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKMDGLL*HRQDGQ
Trigger: CTGGCCATCTTGTCTGTGCAACAACAGACCATCCAT...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGTCGCAGCTGCCGCAGTaGGTCAAAATACTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKSQLPQ*VKILEE
Trigger: TTCTTCCAGTATTTTGACCAACTGCGGCAGCTGCGA...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACTTTATAATAGTGTCTTaGAACCGGCGCTGGATCTGC +
Preference number: 5 (lower is better)
Translates to: DLINAGHSHRENARGYYNFIIVS*NRRWIC
Trigger: GCAGATCCAGCGCCGGTTCAAAGACACTATTATAAA...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCTGTCGCATATGGAAGTaGACAACATACTCAGCATTA +
Preference number: 5 (lower is better)
Translates to: MLGIPTGKTQEDIITISSCRIWK*TTYSAL
Trigger: TAATGCTGAGTATGTTGTCAACTTCCATATGCGACA...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp ATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATCAGTAGCAATGACATTTTGGTTTaGGATTCTTCGAGGCTTGAT +
Preference number: 5 (lower is better)
Translates to: MLGIPTGKTQEDIITISSNDILV*DSSRLD
Trigger: ATCAAGCCTCGAAGAATCCAAAACCAAAATGTCATT...GCTACTGATTGTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGACCACCTTGTCACACTaGAACGTGCGTGTATCACAT +
Preference number: 5 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKTTLSH*NVRVSH
Trigger: ATGTGATACACGCACGTTCAAGTGTGACAAGGTGGT...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGACCAGCAACCGGTGTTaGAGGGAATTGATGAAAGGA +
Preference number: 5 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKTSNRC*RELMKG
Trigger: TCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGT...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGTGCCTTGCAAAATTGTaGCTAGAAGCTGAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKCLAKL*LEAEQG
Trigger: TCCCTGCTCAGCTTCTAGCAACAATTTTGCAAGGCA...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGTCGGGAGCTTTTGCTTaGGAGTCCACTGAGATAAGT +
Preference number: 5 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKSGAFA*ESTEIS
Trigger: ACTTATCTCAGTGGACTCCAAAGCAAAAGCTCCCGA...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGGCGGTGAATGACATTTaGGTTTTGGATTCTTCGAGG +
Preference number: 5 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKAVNDI*VLDSSR
Trigger: CCTCGAAGAATCCAAAACCAAAATGTCATTCACCGC...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp CATGAAGGGGATAAAAGTCTAATGCTTTCATCTTCACAGCAATCAAATGCAAAGAAAAATTCCATTAGGTaGAGCCACCCTCACTCCTCT +
Preference number: 5 (lower is better)
Translates to: HEGDKSLMLSSSQQSNAKKNSIR*SHPHSS
Trigger: AGAGGAGTGAGGGTGGCTCAACCTAATGGAATTTTT...CTTTGCATTTGATTGCTGTGAAGATGAAAGCATTAGACTTTTATCCCCTTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS-3UTR CAA 90 bp GACTTAATTAATGCTGGGCATTCCCACAGGGAAAACGCAAGAGGATATTATAACAATGACATTTTGGTTTaGGATTCTTCGAGGCTTGAT +
Preference number: 5 (lower is better)
Translates to: DLINAGHSHRENARGYYNNDILV*DSSRLD
Trigger: ATCAAGCCTCGAAGAATCCAAAACCAAAATGTCATT...GTTATAATATCCTCTTGCGTTTTCCCTGTGGGAATGCCCAGCATTAATTAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000564406.5
CDS GCA 72 bp ACTGCCAGGCAGCAACTGCTGACAACTCGCCTGGGGTaGTGCAAATGCTCCCTGCAGGAGGTGAAACTTCAG +
Preference number: 6 (lower is better)
Translates to: TARQQLLTTRLG*CKCSLQEVKLQ
Trigger: CTGAAGTTTCACCTCCTGCAGGGAGCATTTGCAGCACCCCAGGCGAGTTGTCAGCAGTTGCTGCCTGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS GCA 72 bp GGTGCAGCAGTGTGGGGAGCCTTCGAGCTCCACTTCTaGTCACTAGAGTTAATGTGTGCTACTGCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: GAAVWGAFELHF*SLELMCATARQ
Trigger: CTGCCTGGCAGTAGCACACATTAACTCTAGTGAGCAGAAGTGGAGCTCGAAGGCTCCCCACACTGCTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS TCA 72 bp CTCTTATCCATGTTTTCGCCTGTTCCCTCTGCCTCCTaGCCAATCCAGGTGCTTACCCATGGCCCTGCATGC +
Preference number: 6 (lower is better)
Translates to: LLSMFSPVPSAS*PIQVLTHGPAC
Trigger: GCATGCAGGGCCATGGGTAAGCACCTGGATTGGTCAGGAGGCAGAGGGAACAGGCGAAAACATGGATAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS GCA 72 bp TCATTGCCATTGGACAGGATTTCTCCTTCGTATCCCTaGAGTAGGTCCTCTGCTGCCTGGCAGCCCTGGTAC +
Preference number: 6 (lower is better)
Translates to: SLPLDRISPSYP*SRSSAAWQPWY
Trigger: GTACCAGGGCTGCCAGGCAGCAGAGGACCTACTGCAGGGATACGAAGGAGAAATCCTGTCCAATGGCAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
ENST00000564406.5
CDS GCA 72 bp AGAGCCGGCCCCGGATATTCACTGACCGCTGGTCATTaGCATTGGACAGGATTTCTCCTTCGTATCCCTGCA +
Preference number: 6 (lower is better)
Translates to: RAGPGYSLTAGH*HWTGFLLRIPA
Trigger: TGCAGGGATACGAAGGAGAAATCCTGTCCAATGGCAATGACCAGCGGTCAGTGAATATCCGGGGCCGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
ENST00000564406.5
CDS GCA 72 bp ACACAGGCTCTTATCCATGTTTTCGCCTGTTCCCTCTaGCTCCTGACCAATCCAGGTGCTTACCCATGGCCC +
Preference number: 6 (lower is better)
Translates to: TQALIHVFACSL*LLTNPGAYPWP
Trigger: GGGCCATGGGTAAGCACCTGGATTGGTCAGGAGGCAGAGGGAACAGGCGAAAACATGGATAAGAGCCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS GCA 72 bp GCTCCACTTCTGCTCACTAGAGTTAATGTGTGCTACTaGCAGGCAGCAACTGCTGACAACTCGCCTGGGGTG +
Preference number: 6 (lower is better)
Translates to: APLLLTRVNVCY*QAATADNSPGV
Trigger: CACCCCAGGCGAGTTGTCAGCAGTTGCTGCCTGGCAGTAGCACACATTAACTCTAGTGAGCAGAAGTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS CAA 72 bp CGGCCCCGGATATTCACTGACCGCTGGTCATTGCCATaGGACAGGATTTCTCCTTCGTATCCCTGCAGTAGG +
Preference number: 6 (lower is better)
Translates to: RPRIFTDRWSLP*DRISPSYPCSR
Trigger: CCTACTGCAGGGATACGAAGGAGAAATCCTGTCCAATGGCAATGACCAGCGGTCAGTGAATATCCGGGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
ENST00000564406.5
CDS CAA 72 bp AAGAGCCGGCCCCGGATATTCACTGACCGCTGGTCATaGCCATTGGACAGGATTTCTCCTTCGTATCCCTGC +
Preference number: 6 (lower is better)
Translates to: KSRPRIFTDRWS*PLDRISPSYPC
Trigger: GCAGGGATACGAAGGAGAAATCCTGTCCAATGGCAATGACCAGCGGTCAGTGAATATCCGGGGCCGGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
ENST00000564406.5
CDS CAA 90 bp TCAAAGAGCCGGCCCCGGATATTCACTGACCGCTGGTCATTGCCATaGGACAGGATTTCTCCTTCGTATCCCTGCAGTAGGTCCTCTGCT +
Preference number: 6 (lower is better)
Translates to: SKSRPRIFTDRWSLP*DRISPSYPCSRSSA
Trigger: AGCAGAGGACCTACTGCAGGGATACGAAGGAGAAATCCTGTCCAATGGCAATGACCAGCGGTCAGTGAATATCCGGGGCCGGCTCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
ENST00000564406.5
CDS CAA 90 bp AAGCGTTCAAAGAGCCGGCCCCGGATATTCACTGACCGCTGGTCATaGCCATTGGACAGGATTTCTCCTTCGTATCCCTGCAGTAGGTCC +
Preference number: 6 (lower is better)
Translates to: KRSKSRPRIFTDRWS*PLDRISPSYPCSRS
Trigger: GGACCTACTGCAGGGATACGAAGGAGAAATCCTGTCCAATGGCAATGACCAGCGGTCAGTGAATATCCGGGGCCGGCTCTTTGAACGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
ENST00000564406.5
CDS CAA 90 bp GTATCTGTCCCACCATACCAGAGAGCAGGGAACTGGTCTAATTCCTaGCTGTATTCCCAGCACCTGTCTGGTCCGGGCTCAAAGAGCCAG +
Preference number: 6 (lower is better)
Translates to: VSVPPYQRAGNWSNS*LYSQHLSGPGSKSQ
Trigger: CTGGCTCTTTGAGCCCGGACCAGACAGGTGCTGGGAATACAGCAAGGAATTAGACCAGTTCCCTGCTCTCTGGTATGGTGGGACAGATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564406.5
CDS GCA 72 bp CACCATACCAGAGAGCAGGGAACTGGTCTAATTCCTTaGTGTATTCCCAGCACCTGTCTGGTCCGGGCTCAA +
Preference number: 6 (lower is better)
Translates to: HHTREQGTGLIP*CIPSTCLVRAQ
Trigger: TTGAGCCCGGACCAGACAGGTGCTGGGAATACAGCAAGGAATTAGACCAGTTCCCTGCTCTCTGGTATGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564406.5
CDS GCA 72 bp CAGCAACTGCTGACAACTCGCCTGGGGTGCTGCAAATaGTCCCTGCAGGAGGTGAAACTTCAGCATCAAAGA +
Preference number: 6 (lower is better)
Translates to: QQLLTTRLGCCK*SLQEVKLQHQR
Trigger: TCTTTGATGCTGAAGTTTCACCTCCTGCAGGGAGCATTTGCAGCACCCCAGGCGAGTTGTCAGCAGTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS CCA 72 bp GGCCCCGGATATTCACTGACCGCTGGTCATTGCCATTaGACAGGATTTCTCCTTCGTATCCCTGCAGTAGGT +
Preference number: 6 (lower is better)
Translates to: GPGYSLTAGHCH*TGFLLRIPAVG
Trigger: ACCTACTGCAGGGATACGAAGGAGAAATCCTGTCCAATGGCAATGACCAGCGGTCAGTGAATATCCGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
ENST00000564406.5
CDS TCA 72 bp GCCTTGCCTGAACTGATCCGCCGGCGTTCCAAGCGGTaGATGACATTTTGGTTTTGGATTCTTCGAGGCTTG +
Preference number: 6 (lower is better)
Translates to: ALPELIRRRSKR*MTFWFWILRGL
Trigger: CAAGCCTCGAAGAATCCAAAACCAAAATGTCATTCACCGCTTGGAACGCCGGCGGATCAGTTCAGGCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000558413.1
ENST00000564406.5
CDS GCA 72 bp CTTCGAGCTCCACTTCTGCTCACTAGAGTTAATGTGTaGTACTGCCAGGCAGCAACTGCTGACAACTCGCCT +
Preference number: 6 (lower is better)
Translates to: LRAPLLLTRVNV*YCQAATADNSP
Trigger: AGGCGAGTTGTCAGCAGTTGCTGCCTGGCAGTAGCACACATTAACTCTAGTGAGCAGAAGTGGAGCTCGAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS CCA 72 bp CGTTCAAAGAGCCGGCCCCGGATATTCACTGACCGCTaGTCATTGCCATTGGACAGGATTTCTCCTTCGTAT +
Preference number: 6 (lower is better)
Translates to: RSKSRPRIFTDR*SLPLDRISPSY
Trigger: ATACGAAGGAGAAATCCTGTCCAATGGCAATGACCAGCGGTCAGTGAATATCCGGGGCCGGCTCTTTGAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000557837.1
ENST00000557842.6
ENST00000558413.1
ENST00000564406.5
CDS CCA 72 bp ACACTTAGAAGAGAAACAGTACTTGGAGACCAGATCTaGGGTCCCAGGAAGCAGAACAGGCTGGGCCAGGAA +
Preference number: 6 (lower is better)
Translates to: TLRRETVLGDQI*GPRKQNRLGQE
Trigger: TTCCTGGCCCAGCCTGTTCTGCTTCCTGGGACCCCAGATCTGGTCTCCAAGTACTGTTTCTCTTCTAAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS TCA 72 bp GTCTTGCCTGAACTGATCCGCCGGCGTTCCAAGCGGTaGATGACATTTTGGTTTTGGATTCTTCGAGGCTTG +
Preference number: 6 (lower is better)
Translates to: VLPELIRRRSKR*MTFWFWILRGL
Trigger: CAAGCCTCGAAGAATCCAAAACCAAAATGTCATTCACCGCTTGGAACGCCGGCGGATCAGTTCAGGCAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557837.1
ENST00000557842.6
CDS GCA 72 bp CCTCAGTTCCTCAGCAAGGAGATCTCTCCAGGAGCTTaGCTGTGTGTTCTTGTGATATGGCGGCTGAATGAT +
Preference number: 6 (lower is better)
Translates to: PQFLSKEISPGA*LCVLVIWRLND
Trigger: ATCATTCAGCCGCCATATCACAAGAACACACAGGCAAGCTCCTGGAGAGATCTCCTTGCTGAGGAACTGAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS CAA 90 bp GGGAAGGATCTAGTTCATCACTGTGTGGTACTAAGTCCTTTACCCTaGCTGGGTCTCAGTTTCCCTATGGGAGAAGGTGCACATGTCCCT +
Preference number: 6 (lower is better)
Translates to: GKDLVHHCVVLSPLP*LGLSFPMGEGAHVP
Trigger: AGGGACATGTGCACCTTCTCCCATAGGGAAACTGAGACCCAGCAAGGGTAAAGGACTTAGTACCACACAGTGATGAACTAGATCCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559656.1
CDS TCA 72 bp TCAACGTTGACAACTGTGAAGTTGGGGAAGACATTCTaGTGGAACACTCGGACTTGGTGCCAGTGGGTACCT +
Preference number: 6 (lower is better)
Translates to: STLTTVKLGKTF*WNTRTWCQWVP
Trigger: AGGTACCCACTGGCACCAAGTCCGAGTGTTCCATCAGAATGTCTTCCCCAACTTCACAGTTGTCAACGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268148.13
ENST00000444300.1
ENST00000564406.5
CDS CCA 72 bp TTAGTATCTGTCCCACCATACCAGAGAGCAGGGAACTaGTCTAATTCCTTGCTGTATTCCCAGCACCTGTCT +
Preference number: 6 (lower is better)
Translates to: LVSVPPYQRAGN*SNSLLYSQHLS
Trigger: AGACAGGTGCTGGGAATACAGCAAGGAATTAGACCAGTTCCCTGCTCTCTGGTATGGTGGGACAGATACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564406.5
CDS CAA 90 bp TACTCAAAGACTGGTTTCCTGGTTCCCTTACTGATGGTGGGACAGTaGAGAGAGAGGACAAGGCACCTCTTTCTAAGAGAGAGAGAGATC +
Preference number: 6 (lower is better)
Translates to: YSKTGFLVPLLMVGQ*RERTRHLFLREREI
Trigger: GATCTCTCTCTCTCTTAGAAAGAGGTGCCTTGTCCTCTCTCTCAACTGTCCCACCATCAGTAAGGGAACCAGGAAACCAGTCTTTGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS GCA 72 bp ATAGCAAACAACTTGCCTGAGAACACGTCTTTCATATaGAAACCAACCAATCCAGAGCCCACACCTCAAGCA +
Preference number: 6 (lower is better)
Translates to: IANNLPENTSFI*KPTNPEPTPQA
Trigger: TGCTTGAGGTGTGGGCTCTGGATTGGTTGGTTTGCATATGAAAGACGTGTTCTCAGGCAAGTTGTTTGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS TCA 72 bp GACATTACCAGACTAGAAAGGCAAAGGTTAGAGCTGTaGTTTACACATTCTTCTATTCCTAGTCCCTGGCCC +
Preference number: 6 (lower is better)
Translates to: DITRLERQRLEL*FTHSSIPSPWP
Trigger: GGGCCAGGGACTAGGAATAGAAGAATGTGTAAATCACAGCTCTAACCTTTGCCTTTCTAGTCTGGTAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS CCA 72 bp CAAATTAGTCAATCCCAAACCTGCTTACCTGCTGTCTaGCACATTAATTTCTGCAGAAACCACAACACAGGC +
Preference number: 6 (lower is better)
Translates to: QISQSQTCLPAV*HINFCRNHNTG
Trigger: GCCTGTGTTGTGGTTTCTGCAGAAATTAATGTGCCAGACAGCAGGTAAGCAGGTTTGGGATTGACTAATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS GCA 72 bp CAAACCTGCTTACCTGCTGTCTGGCACATTAATTTCTaGAGAAACCACAACACAGGCTCTTATCCATGTTTT +
Preference number: 6 (lower is better)
Translates to: QTCLPAVWHINF*RNHNTGSYPCF
Trigger: AAAACATGGATAAGAGCCTGTGTTGTGGTTTCTGCAGAAATTAATGTGCCAGACAGCAGGTAAGCAGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS GCA 72 bp GGGCCCATCAAAATTCAAATTAGTCAATCCCAAACCTaGTTACCTGCTGTCTGGCACATTAATTTCTGCAGA +
Preference number: 6 (lower is better)
Translates to: GPIKIQISQSQT*LPAVWHINFCR
Trigger: TCTGCAGAAATTAATGTGCCAGACAGCAGGTAAGCAGGTTTGGGATTGACTAATTTGAATTTTGATGGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS CCA 72 bp GTTTTATTGGTCATGCCAATCAACCATGATACGATGTaGGAGGGCATGAATATAGAAGGTAGGGTCACTGTA +
Preference number: 6 (lower is better)
Translates to: VLLVMPINHDTM*EGMNIEGRVTV
Trigger: TACAGTGACCCTACCTTCTATATTCATGCCCTCCCACATCGTATCATGGTTGATTGGCATGACCAATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS TCA 72 bp AGTTTGCTAATTCCTGGAGATAGCAAACAACTTGCCTaGGAACACGTCTTTCATATGCAAACCAACCAATCC +
Preference number: 6 (lower is better)
Translates to: SLLIPGDSKQLA*EHVFHMQTNQS
Trigger: GGATTGGTTGGTTTGCATATGAAAGACGTGTTCTCAGGCAAGTTGTTTGCTATCTCCAGGAATTAGCAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606927.1
CDS TCA 72 bp TTCATGACAGTCATTTCGCGTGTGCCTTCCCATAGTTaGTTAAGACAAATGCCAGTACCTTTAAGATATACG +
Preference number: 6 (lower is better)
Translates to: FMTVISRVPSHS*LRQMPVPLRYT
Trigger: CGTATATCTTAAAGGTACTGGCATTTGTCTTAATCAACTATGGGAAGGCACACGCGAAATGACTGTCATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606927.1