RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DESI1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100418

Ensembl transcript IDs: ENST00000263256.7, ENST00000463886.1, ENST00000468151.1, ENST00000482612.1

Found 244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGGGAGAGCTTGCCTTCCCATGGAGCTCTGGGAAAACTGCTCAGTaGTCCCTCGCTCTCTCCCCACAAACCCTAGGGCACAGGCAATGG +
Preference number: 1 (lower is better)
Translates to: EGELAFPWSSGKTAQ*SLALSPQTLGHRQW
Trigger: CCATTGCCTGTGCCCTAGGGTTTGTGGGGAGAGAGCGAGGGATCACTGAGCAGTTTTCCCAGAGCTCCATGGGAAGGCAAGCTCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR GCA 90 bp CCATTGGGAGGGAGAGCTTGCCTTCCCATGGAGCTCTGGGAAAACTaGTCAGTGATCCCTCGCTCTCTCCCCACAAACCCTAGGGCACAG +
Preference number: 1 (lower is better)
Translates to: PLGGRACLPMELWEN*SVIPRSLPTNPRAQ
Trigger: CTGTGCCCTAGGGTTTGTGGGGAGAGAGCGAGGGATCACTGAGCAGTTTTCCCAGAGCTCCATGGGAAGGCAAGCTCTCCCTCCCAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CCA 90 bp TGGAAGACAGAGCCGGGCCAGGCAAGCTGGAAAAGGGAACAACACTaGTGGGAAACAGAGCACTGGCCAAGACCAACCTGCTACCCTCCC +
Preference number: 1 (lower is better)
Translates to: WKTEPGQASWKREQH*WETEHWPRPTCYPP
Trigger: GGGAGGGTAGCAGGTTGGTCTTGGCCAGTGCTCTGTTTCCCACCAGTGTTGTTCCCTTTTCCAGCTTGCCTGGCCCGGCTCTGTCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CCA 90 bp AAGACAGAGCCGGGCCAGGCAAGCTGGAAAAGGGAACAACACTGGTaGGAAACAGAGCACTGGCCAAGACCAACCTGCTACCCTCCCAGA +
Preference number: 1 (lower is better)
Translates to: KTEPGQASWKREQHW*ETEHWPRPTCYPPR
Trigger: TCTGGGAGGGTAGCAGGTTGGTCTTGGCCAGTGCTCTGTTTCCCACCAGTGTTGTTCCCTTTTCCAGCTTGCCTGGCCCGGCTCTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR GCA 90 bp AGTTTACAGTTAGTGACAGTGGGGCTCCCATTGGGAGGGAGAGCTTaGCTTCCCATGGAGCTCTGGGAAAACTGCTCAGTGATCCCTCGC +
Preference number: 1 (lower is better)
Translates to: SLQLVTVGLPLGGRA*LPMELWENCSVIPR
Trigger: GCGAGGGATCACTGAGCAGTTTTCCCAGAGCTCCATGGGAAGGCAAGCTCTCCCTCCCAATGGGAGCCCCACTGTCACTAACTGTAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CCA 90 bp CAGGCAAGCTGGAAAAGGGAACAACACTGGTGGGAAACAGAGCACTaGCCAAGACCAACCTGCTACCCTCCCAGAAGAAACCCAGCCTCA +
Preference number: 1 (lower is better)
Translates to: QASWKREQHWWETEH*PRPTCYPPRRNPAS
Trigger: TGAGGCTGGGTTTCTTCTGGGAGGGTAGCAGGTTGGTCTTGGCCAGTGCTCTGTTTCCCACCAGTGTTGTTCCCTTTTCCAGCTTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR TCA 90 bp ACTGCTCCAGCCCAGACCTCATCCACTATGACAAGTCAGCTATGCTaGGGAAAGGCAGCCTCGGGGGCACAAAGGCAGGTTTCCCAAAAT +
Preference number: 1 (lower is better)
Translates to: TAPAQTSSTMTSQLC*GKAASGAQRQVSQN
Trigger: ATTTTGGGAAACCTGCCTTTGTGCCCCCGAGGCTGCCTTTCCTCAGCATAGCTGACTTGTCATAGTGGATGAGGTCTGGGCTGGAGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR TCA 90 bp AAAAGGCCTTGGCTTCTACTGCTCCAGCCCAGACCTCATCCACTATaGCAAGTCAGCTATGCTGAGGAAAGGCAGCCTCGGGGGCACAAA +
Preference number: 1 (lower is better)
Translates to: KRPWLLLLQPRPHPL*QVSYAEERQPRGHK
Trigger: TTTGTGCCCCCGAGGCTGCCTTTCCTCAGCATAGCTGACTTGTCATAGTGGATGAGGTCTGGGCTGGAGCAGTAGAAGCCAAGGCCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR TCA 90 bp AAAACTCACCTGGGTCCCACAGGTGTTGGCAACTTGGGTAGAGCGTaGGTGTTCTCTGGAAAGAGTTCTAGGTTGGGGCTCCCGCAAACT +
Preference number: 1 (lower is better)
Translates to: KTHLGPTGVGNLGRA*VFSGKSSRLGLPQT
Trigger: AGTTTGCGGGAGCCCCAACCTAGAACTCTTTCCAGAGAACACTCACGCTCTACCCAAGTTGCCAACACCTGTGGGACCCAGGTGAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR GCA 90 bp GTGGAAGGAGGAATGGCTTTATCCTGTTTTCTCCGGCCTGATACTTaGTGTTACTCCCTTGATCCGGAGGCAATGGCTGCTCCAGCACTG +
Preference number: 1 (lower is better)
Translates to: VEGGMALSCFLRPDT*CYSLDPEAMAAPAL
Trigger: CAGTGCTGGAGCAGCCATTGCCTCCGGATCAAGGGAGTAACAGCAAGTATCAGGCCGGAGAAAACAGGATAAAGCCATTCCTCCTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR GCA 90 bp GAGGTGTCCACTGTGCAATACAAGTACGTGACTCATTTCCCACTGTaGTTGCCTGTTCACATCCAGGCGGAGTTAGCCGGCCACAATGAG +
Preference number: 1 (lower is better)
Translates to: EVSTVQYKYVTHFPL*LPVHIQAELAGHNE
Trigger: CTCATTGTGGCCGGCTAACTCCGCCTGGATGTGAACAGGCAAGCACAGTGGGAAATGAGTCACGTACTTGTATTGCACAGTGGACACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CCA 90 bp ACGGATGTTCTAAAACTCACCTGGGTCCCACAGGTGTTGGCAACTTaGGTAGAGCGTGAGTGTTCTCTGGAAAGAGTTCTAGGTTGGGGC +
Preference number: 1 (lower is better)
Translates to: TDVLKLTWVPQVLAT*VERECSLERVLGWG
Trigger: GCCCCAACCTAGAACTCTTTCCAGAGAACACTCACGCTCTACCCAAGTTGCCAACACCTGTGGGACCCAGGTGAGTTTTAGAACATCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR GCA 90 bp AGGGAACAACACTGGTGGGAAACAGAGCACTGGCCAAGACCAACCTaGTACCCTCCCAGAAGAAACCCAGCCTCAGAAATTCTTTCTCTT +
Preference number: 1 (lower is better)
Translates to: REQHWWETEHWPRPT*YPPRRNPASEILSL
Trigger: AAGAGAAAGAATTTCTGAGGCTGGGTTTCTTCTGGGAGGGTAGCAGGTTGGTCTTGGCCAGTGCTCTGTTTCCCACCAGTGTTGTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR TCA 90 bp GAGTGTTCTCTGGAAAGAGTTCTAGGTTGGGGCTCCCGCAAACTGTaGCTCGCTTTCTGTTTAAACAAAGCCCCTCCCTTTCTCCAGTGT +
Preference number: 1 (lower is better)
Translates to: ECSLERVLGWGSRKL*LAFCLNKAPPFLQC
Trigger: ACACTGGAGAAAGGGAGGGGCTTTGTTTAAACAGAAAGCGAGTCACAGTTTGCGGGAGCCCCAACCTAGAACTCTTTCCAGAGAACACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CCA 90 bp AACACTAGAGTAACTTTCTGGGTCACGGATGTTCTAAAACTCACCTaGGTCCCACAGGTGTTGGCAACTTGGGTAGAGCGTGAGTGTTCT +
Preference number: 1 (lower is better)
Translates to: NTRVTFWVTDVLKLT*VPQVLATWVERECS
Trigger: AGAACACTCACGCTCTACCCAAGTTGCCAACACCTGTGGGACCCAGGTGAGTTTTAGAACATCCGTGACCCAGAAAGTTACTCTAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CCA 90 bp GGGAATCCCATCCCTTGGTCCCCAGCTAAATACTGCGTACTGGCCTaGATGGTGGTTACAGAGACTGCAAATAACCTACATCATTACTTG +
Preference number: 1 (lower is better)
Translates to: GNPIPWSPAKYCVLA*MVVTETANNLHHYL
Trigger: CAAGTAATGATGTAGGTTATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTACGCAGTATTTAGCTGGGGACCAAGGGATGGGATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR GCA 90 bp TTTCTTAGAGTAGGGAATCCCATCCCTTGGTCCCCAGCTAAATACTaGGTACTGGCCTGGATGGTGGTTACAGAGACTGCAAATAACCTA +
Preference number: 1 (lower is better)
Translates to: FLRVGNPIPWSPAKY*VLAWMVVTETANNL
Trigger: TAGGTTATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTACGCAGTATTTAGCTGGGGACCAAGGGATGGGATTCCCTACTCTAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CCA 90 bp ATCCCATCCCTTGGTCCCCAGCTAAATACTGCGTACTGGCCTGGATaGTGGTTACAGAGACTGCAAATAACCTACATCATTACTTGCAGA +
Preference number: 1 (lower is better)
Translates to: IPSLGPQLNTAYWPG*WLQRLQITYIITCR
Trigger: TCTGCAAGTAATGATGTAGGTTATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTACGCAGTATTTAGCTGGGGACCAAGGGATGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CCA 90 bp CCATCCCTTGGTCCCCAGCTAAATACTGCGTACTGGCCTGGATGGTaGTTACAGAGACTGCAAATAACCTACATCATTACTTGCAGAAAA +
Preference number: 1 (lower is better)
Translates to: PSLGPQLNTAYWPGW*LQRLQITYIITCRK
Trigger: TTTTCTGCAAGTAATGATGTAGGTTATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTACGCAGTATTTAGCTGGGGACCAAGGGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CCA 90 bp ATGTACACCAAATCCTTTGGTTCATTTAACACTAGAGTAACTTTCTaGGTCACGGATGTTCTAAAACTCACCTGGGTCCCACAGGTGTTG +
Preference number: 1 (lower is better)
Translates to: MYTKSFGSFNTRVTF*VTDVLKLTWVPQVL
Trigger: CAACACCTGTGGGACCCAGGTGAGTTTTAGAACATCCGTGACCCAGAAAGTTACTCTAGTGTTAAATGAACCAAAGGATTTGGTGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR GCA 90 bp ATTCTGCTAGTAGATCACGATTATACAACAGTCCCTGCTAGTTTCTaGTCTAATCTATTATTTCCATGCACACTGGCAAATCAGTGGGTC +
Preference number: 1 (lower is better)
Translates to: ILLVDHDYTTVPASF*SNLLFPCTLANQWV
Trigger: GACCCACTGATTTGCCAGTGTGCATGGAAATAATAGATTAGAGCAGAAACTAGCAGGGACTGTTGTATAATCGTGATCTACTAGCAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR TCA 90 bp ATGGAGCTCTGGGAAAACTGCTCAGTGATCCCTCGCTCTCTCCCCACAAACCCTAAGGAAAAGCCCTGGTaGGGCAGGGCGGTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: MELWENCSVIPRSLPTNPKEKPW*GRAVPG
Trigger: GCCTGGGACCGCCCTGCCTCACCAGGGCTTTTCCTT...AGGGTTTGTGGGGAGAGAGCGAGGGATCACTGAGCAGTTTTCCCAGAGCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR GCA 90 bp TTGCCTGTTCACATCCAGGCGGAGTTAGCCGGCCACAATGAGAATGCTCCTGAGCATCCCAGCTGGTCATaGCCCTGGTCAGGTCGCAGG +
Preference number: 2 (lower is better)
Translates to: LPVHIQAELAGHNENAPEHPSWS*PWSGRR
Trigger: CCTGCGACCTGACCAGGGGCATGACCAGCTGGGATG...CTCAGGAGCATTCTCATTGTGGCCGGCTAACTCCGCCTGGATGTGAACAGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CCA 90 bp ACATCCCAGCTGGTCATGCCCCTGGTCAGGTCGCAGGCAAACACTAAGGCAGAACACTGCACACCAGCCTaGGTGGTAGAGCGAGACTCC +
Preference number: 2 (lower is better)
Translates to: TSQLVMPLVRSQANTKAEHCTPA*VVERDS
Trigger: GGAGTCTCGCTCTACCACCCAGGCTGGTGTGCAGTG...TTCTGCCTTAGTGTTTGCCTGCGACCTGACCAGGGGCATGACCAGCTGGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR GCA 90 bp ACATCCCAGCTGGTCATGCCCCTGGTCAGGTCGCAGGCAAACACTAAGGCAGAAGGCCTTGGCTTCTACTaGTCCAGCCCAGACCTCATC +
Preference number: 2 (lower is better)
Translates to: TSQLVMPLVRSQANTKAEGLGFY*SSPDLI
Trigger: GATGAGGTCTGGGCTGGAGCAGTAGAAGCCAAGGCC...TTCTGCCTTAGTGTTTGCCTGCGACCTGACCAGGGGCATGACCAGCTGGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR TCA 90 bp GCTGGAAAAGGGAACAACACTGGTGGGAAACAGAGCACTGGCCAAGACCAACCTTGTCTACATGCGGCCTaGCGGTCTCCTTCCCTGGGA +
Preference number: 2 (lower is better)
Translates to: AGKGNNTGGKQSTGQDQPCLHAA*RSPSLG
Trigger: TCCCAGGGAAGGAGACCGTCAGGCCGCATGTAGACA...AGGTTGGTCTTGGCCAGTGCTCTGTTTCCCACCAGTGTTGTTCCCTTTTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR TCA 90 bp ACATCCCAGCTGGTCATGCCCCTGGTCAGGTCGCAGGCAAACACTAAGGCAGAATTGCTGTTACTCCCTTaGTCCGGAGGCAATGGCTGC +
Preference number: 2 (lower is better)
Translates to: TSQLVMPLVRSQANTKAELLLLP*SGGNGC
Trigger: GCAGCCATTGCCTCCGGATCAAGGGAGTAACAGCAA...TTCTGCCTTAGTGTTTGCCTGCGACCTGACCAGGGGCATGACCAGCTGGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CAA 90 bp TGGCTTTATCCTGTTTTCTCCGGCCTGATACTTGCTGTTACTCCCTaGATCCGGAGGCAATGGCTGCTCCAGCACTGGCCTTGCTTGGGG +
Preference number: 2 (lower is better)
Translates to: WLYPVFSGLILAVTP*IRRQWLLQHWPCLG
Trigger: CCCCAAGCAAGGCCAGTGCTGGAGCAGCCATTGCCTCCGGATCAAGGGAGTAACAGCAAGTATCAGGCCGGAGAAAACAGGATAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CAA 90 bp GAGTTTACAGTTAGTGACAGTGGGGCTCCCATTGGGAGGGAGAGCTaGCCTTCCCATGGAGCTCTGGGAAAACTGCTCAGTGATCCCTCG +
Preference number: 2 (lower is better)
Translates to: EFTVSDSGAPIGRES*PSHGALGKLLSDPS
Trigger: CGAGGGATCACTGAGCAGTTTTCCCAGAGCTCCATGGGAAGGCAAGCTCTCCCTCCCAATGGGAGCCCCACTGTCACTAACTGTAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CCA 90 bp TTTGGAGAGGAAAGGCCTGTGCTGCAGGCCAGACTTCCAGGAAGAAGCAACATAAGCCTCCCGAGTAGCTaGGACTACAGGCATGCGCCA +
Preference number: 2 (lower is better)
Translates to: FGEERPVLQARLPGRSNISLPSS*DYRHAP
Trigger: TGGCGCATGCCTGTAGTCCCAGCTACTCGGGAGGCT...TATGTTGCTTCTTCCTGGAAGTCTGGCCTGCAGCACAGGCCTTTCCTCTCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CCA 90 bp ACATCCCAGCTGGTCATGCCCCTGGTCAGGTCGCAGGCAAACACTAAGGCAGAAAGTGGCAAGAAGTTGTaGCAGAAGGGGCCCAAGGAT +
Preference number: 2 (lower is better)
Translates to: TSQLVMPLVRSQANTKAESGKKL*QKGPKD
Trigger: ATCCTTGGGCCCCTTCTGCCACAACTTCTTGCCACT...TTCTGCCTTAGTGTTTGCCTGCGACCTGACCAGGGGCATGACCAGCTGGGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CAA 90 bp CTGAGGTGCTGGGACAGACAGAAATATGAGGATGGGGGTAGGCAGTaGAAGCCTGAGCCTGAGTTTACAGTTAGTGACAGTGGGGCTCCC +
Preference number: 2 (lower is better)
Translates to: LRCWDRQKYEDGGRQ*KPEPEFTVSDSGAP
Trigger: GGGAGCCCCACTGTCACTAACTGTAAACTCAGGCTCAGGCTTCAACTGCCTACCCCCATCCTCATATTTCTGTCTGTCCCAGCACCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR TCA 90 bp ACATCCCAGCTGGTCATGCCCCTGGTCAGGTCGCAGGCAAACACTAAGGCAGAAGGCTCCCGCAAACTGTaGCTCGCTTTCTGTTTAAAC +
Preference number: 2 (lower is better)
Translates to: TSQLVMPLVRSQANTKAEGSRKL*LAFCLN
Trigger: GTTTAAACAGAAAGCGAGTCACAGTTTGCGGGAGCC...TTCTGCCTTAGTGTTTGCCTGCGACCTGACCAGGGGCATGACCAGCTGGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR TCA 90 bp TTGCCTGTTCACATCCAGGCGGAGTTAGCCGGCCACAATGAGAATGCTCCTGAGATGGGGGTAGGCAGTTaGAGCCTGAGCCTGAGTTTA +
Preference number: 2 (lower is better)
Translates to: LPVHIQAELAGHNENAPEMGVGS*SLSLSL
Trigger: TAAACTCAGGCTCAGGCTTCAACTGCCTACCCCCAT...CTCAGGAGCATTCTCATTGTGGCCGGCTAACTCCGCCTGGATGTGAACAGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR GCA 90 bp ATGGAGCTCTGGGAAAACTGCTCAGTGATCCCTCGCTCTCTCCCCACAAACCCTCTCCGGCCTGATACTTaGTGTTACTCCCTTGATCCG +
Preference number: 2 (lower is better)
Translates to: MELWENCSVIPRSLPTNPLRPDT*CYSLDP
Trigger: CGGATCAAGGGAGTAACAGCAAGTATCAGGCCGGAG...AGGGTTTGTGGGGAGAGAGCGAGGGATCACTGAGCAGTTTTCCCAGAGCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CCA 90 bp ATGGAGCTCTGGGAAAACTGCTCAGTGATCCCTCGCTCTCTCCCCACAAACCCTGGGAATCCCATCCCTTaGTCCCCAGCTAAATACTGC +
Preference number: 2 (lower is better)
Translates to: MELWENCSVIPRSLPTNPGNPIP*SPAKYC
Trigger: GCAGTATTTAGCTGGGGACCAAGGGATGGGATTCCC...AGGGTTTGTGGGGAGAGAGCGAGGGATCACTGAGCAGTTTTCCCAGAGCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR TCA 90 bp AGCCCAGACCTCATCCACTATGACAAGTCAGCTATGCTGAGGAAAGGCAGCCTCGTAAGGGAGGGAAGGTaGGGGTTGTGGCTAAAGAGT +
Preference number: 2 (lower is better)
Translates to: SPDLIHYDKSAMLRKGSLVREGR*GLWLKS
Trigger: ACTCTTTAGCCACAACCCTCACCTTCCCTCCCTTAC...GAGGCTGCCTTTCCTCAGCATAGCTGACTTGTCATAGTGGATGAGGTCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR GCA 90 bp GCTGGAAAAGGGAACAACACTGGTGGGAAACAGAGCACTGGCCAAGACCAACCTTCCCCAGCTAAATACTaGGTACTGGCCTGGATGGTG +
Preference number: 2 (lower is better)
Translates to: AGKGNNTGGKQSTGQDQPSPAKY*VLAWMV
Trigger: CACCATCCAGGCCAGTACGCAGTATTTAGCTGGGGA...AGGTTGGTCTTGGCCAGTGCTCTGTTTCCCACCAGTGTTGTTCCCTTTTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR GCA 90 bp AGCAAGTCATTAGGAAAATGCCCACTCATGCCCCAACCTGCCTTTCTAAAGTCATCGCCCAGGCTGGAGTaGACTGGTACGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: SKSLGKCPLMPQPAFLKSSPRLE*TGTISA
Trigger: AGCCGAGATCGTACCAGTGCACTCCAGCCTGGGCGA...TGACTTTAGAAAGGCAGGTTGGGGCATGAGTGGGCATTTTCCTAATGACTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CCA 90 bp GCTGGAAAAGGGAACAACACTGGTGGGAAACAGAGCACTGGCCAAGACCAACCTTCCCTTTCTCCAGTGTaGAGGACGCTTAGGAAACAG +
Preference number: 2 (lower is better)
Translates to: AGKGNNTGGKQSTGQDQPSLSPV*RTLRKQ
Trigger: CTGTTTCCTAAGCGTCCTCCACACTGGAGAAAGGGA...AGGTTGGTCTTGGCCAGTGCTCTGTTTCCCACCAGTGTTGTTCCCTTTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CCA 90 bp GCTGGAAAAGGGAACAACACTGGTGGGAAACAGAGCACTGGCCAAGACCAACCTCAGGTGTTGGCAACTTaGGTAGAGCGTGAGTGTTCT +
Preference number: 2 (lower is better)
Translates to: AGKGNNTGGKQSTGQDQPQVLAT*VERECS
Trigger: AGAACACTCACGCTCTACCCAAGTTGCCAACACCTG...AGGTTGGTCTTGGCCAGTGCTCTGTTTCCCACCAGTGTTGTTCCCTTTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CCA 90 bp GCTGGAAAAGGGAACAACACTGGTGGGAAACAGAGCACTGGCCAAGACCAACCTGTTCTAAAACTCACCTaGGTCCCACAGGTGTTGGCA +
Preference number: 2 (lower is better)
Translates to: AGKGNNTGGKQSTGQDQPVLKLT*VPQVLA
Trigger: TGCCAACACCTGTGGGACCCAGGTGAGTTTTAGAAC...AGGTTGGTCTTGGCCAGTGCTCTGTTTCCCACCAGTGTTGTTCCCTTTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CAA 90 bp GTGTCCACTGTGCAATACAAGTACGTGACTCATTTCCCACTGTGCTaGCCTGTTCACATCCAGGCGGAGTTAGCCGGCCACAATGAGAAT +
Preference number: 2 (lower is better)
Translates to: VSTVQYKYVTHFPLC*PVHIQAELAGHNEN
Trigger: ATTCTCATTGTGGCCGGCTAACTCCGCCTGGATGTGAACAGGCAAGCACAGTGGGAAATGAGTCACGTACTTGTATTGCACAGTGGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR TCA 90 bp AGCAAGTCATTAGGAAAATGCCCACTCATGCCCCAACCTGCCTTTCTAAAGTCAACAAGTCAGCTATGCTaGGGAAAGGCAGCCTCGGGG +
Preference number: 2 (lower is better)
Translates to: SKSLGKCPLMPQPAFLKSTSQLC*GKAASG
Trigger: CCCCGAGGCTGCCTTTCCTCAGCATAGCTGACTTGT...TGACTTTAGAAAGGCAGGTTGGGGCATGAGTGGGCATTTTCCTAATGACTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR TCA 90 bp CCTATCCCTTTAAACCAATGGACCTCTAGAGGTGTCCACTGTGCAATACAAGTAGGCAGGAGAACCACTTaGACCCGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: PIPLNQWTSRGVHCAIQVGRRTT*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGTGGTTCTCCTGCC...TACTTGTATTGCACAGTGGACACCTCTAGAGGTCCATTGGTTTAAAGGGATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR GCA 90 bp ATGGAGCTCTGGGAAAACTGCTCAGTGATCCCTCGCTCTCTCCCCACAAACCCTACTCATGCCCCAACCTaGCTTTCTAAAGTCAGAATG +
Preference number: 2 (lower is better)
Translates to: MELWENCSVIPRSLPTNPTHAPT*LSKVRM
Trigger: CATTCTGACTTTAGAAAGGCAGGTTGGGGCATGAGT...AGGGTTTGTGGGGAGAGAGCGAGGGATCACTGAGCAGTTTTCCCAGAGCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CCA 90 bp AGCAAGTCATTAGGAAAATGCCCACTCATGCCCCAACCTGCCTTTCTAAAGTCAAGCACTGGCCTTGCTTaGGGTAAGGGAGGGAAGGTG +
Preference number: 2 (lower is better)
Translates to: SKSLGKCPLMPQPAFLKSSTGLA*GKGGKV
Trigger: CACCTTCCCTCCCTTACCCCAAGCAAGGCCAGTGCT...TGACTTTAGAAAGGCAGGTTGGGGCATGAGTGGGCATTTTCCTAATGACTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CCA 90 bp AGCAAGTCATTAGGAAAATGCCCACTCATGCCCCAACCTGCCTTTCTAAAGTCATTGATCCGGAGGCAATaGCTGCTCCAGCACTGGCCT +
Preference number: 2 (lower is better)
Translates to: SKSLGKCPLMPQPAFLKSLIRRQ*LLQHWP
Trigger: AGGCCAGTGCTGGAGCAGCCATTGCCTCCGGATCAA...TGACTTTAGAAAGGCAGGTTGGGGCATGAGTGGGCATTTTCCTAATGACTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CAA 90 bp TTCTGGGTCACGGATGTTCTAAAACTCACCTGGGTCCCACAGGTGTaGGCAACTTGGGTAGAGCGTGAGTGTTCTCTGGAAAGAGTTCTA +
Preference number: 2 (lower is better)
Translates to: FWVTDVLKLTWVPQV*ATWVERECSLERVL
Trigger: TAGAACTCTTTCCAGAGAACACTCACGCTCTACCCAAGTTGCCAACACCTGTGGGACCCAGGTGAGTTTTAGAACATCCGTGACCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR TCA 90 bp TTTGGAGAGGAAAGGCCTGTGCTGCAGGCCAGACTTCCAGGAAGAAGCAACATAAACTTGGGTAGAGCGTaGGTGTTCTCTGGAAAGAGT +
Preference number: 2 (lower is better)
Translates to: FGEERPVLQARLPGRSNINLGRA*VFSGKS
Trigger: ACTCTTTCCAGAGAACACTCACGCTCTACCCAAGTT...TATGTTGCTTCTTCCTGGAAGTCTGGCCTGCAGCACAGGCCTTTCCTCTCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR TCA 90 bp TTTGGAGAGGAAAGGCCTGTGCTGCAGGCCAGACTTCCAGGAAGAAGCAACATAAGACCTCATCCACTATaGCAAGTCAGCTATGCTGAG +
Preference number: 2 (lower is better)
Translates to: FGEERPVLQARLPGRSNIRPHPL*QVSYAE
Trigger: CTCAGCATAGCTGACTTGTCATAGTGGATGAGGTCT...TATGTTGCTTCTTCCTGGAAGTCTGGCCTGCAGCACAGGCCTTTCCTCTCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR TCA 90 bp CCTATCCCTTTAAACCAATGGACCTCTAGAGGTGTCCACTGTGCAATACAAGTACAAGGATGTCAGACCTaGGACTCGGGTACCTGGCAG +
Preference number: 2 (lower is better)
Translates to: PIPLNQWTSRGVHCAIQVQGCQT*DSGTWQ
Trigger: CTGCCAGGTACCCGAGTCTCAGGTCTGACATCCTTG...TACTTGTATTGCACAGTGGACACCTCTAGAGGTCCATTGGTTTAAAGGGATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR GCA 90 bp ACTGCGTACTGGCCTGGATGGTGGTTACAGAGACTGCAAATAACCTACATCATTGCAGCATTGTCTACATaGGGCCTGACGGTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: TAYWPGWWLQRLQITYIIAALST*GLTVSF
Trigger: GAAGGAGACCGTCAGGCCGCATGTAGACAATGCTGC...AATGATGTAGGTTATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTACGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CCA 90 bp GCTGGAAAAGGGAACAACACTGGTGGGAAACAGAGCACTGGCCAAGACCAACCTAGGTGGAAGGAGGAATaGCTTTATCCTGTTTTCTCC +
Preference number: 2 (lower is better)
Translates to: AGKGNNTGGKQSTGQDQPRWKEE*LYPVFS
Trigger: GGAGAAAACAGGATAAAGCCATTCCTCCTTCCACCT...AGGTTGGTCTTGGCCAGTGCTCTGTTTCCCACCAGTGTTGTTCCCTTTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CCA 90 bp AGCCCAGACCTCATCCACTATGACAAGTCAGCTATGCTGAGGAAAGGCAGCCTCGGCAATCCATCTAGGTaGAAGGAGGAATGGCTTTAT +
Preference number: 2 (lower is better)
Translates to: SPDLIHYDKSAMLRKGSLGNPSR*KEEWLY
Trigger: ATAAAGCCATTCCTCCTTCCACCTAGATGGATTGCC...GAGGCTGCCTTTCCTCAGCATAGCTGACTTGTCATAGTGGATGAGGTCTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CCA 90 bp GCTGGAAAAGGGAACAACACTGGTGGGAAACAGAGCACTGGCCAAGACCAACCTTTCAAGTCCGTGAAGTaGCAAGAAGTTGTGGCAGAA +
Preference number: 2 (lower is better)
Translates to: AGKGNNTGGKQSTGQDQPFKSVK*QEVVAE
Trigger: TTCTGCCACAACTTCTTGCCACTTCACGGACTTGAA...AGGTTGGTCTTGGCCAGTGCTCTGTTTCCCACCAGTGTTGTTCCCTTTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CAA 90 bp ATTAAACTTTCAATCATTTGGCCTCTACAAGTTCCCAAATGTCACTaGACATCCCAGCTGGTCATGCCCCTGGTCAGGTCGCAGGCAAAC +
Preference number: 2 (lower is better)
Translates to: IKLSIIWPLQVPKCH*TSQLVMPLVRSQAN
Trigger: GTTTGCCTGCGACCTGACCAGGGGCATGACCAGCTGGGATGTCAAGTGACATTTGGGAACTTGTAGAGGCCAAATGATTGAAAGTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR TCA 90 bp ACTGCGTACTGGCCTGGATGGTGGTTACAGAGACTGCAAATAACCTACATCATTAAACAGCATCCGAAGTaGACGCACAGACAAGACAGC +
Preference number: 2 (lower is better)
Translates to: TAYWPGWWLQRLQITYIIKQHPK*THRQDS
Trigger: GCTGTCTTGTCTGTGCGTTCACTTCGGATGCTGTTT...AATGATGTAGGTTATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTACGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR GCA 90 bp CCTATCCCTTTAAACCAATGGACCTCTAGAGGTGTCCACTGTGCAATACAAGTAGAGCTCTGGGAAAACTaGTCAGTGATCCCTCGCTCT +
Preference number: 2 (lower is better)
Translates to: PIPLNQWTSRGVHCAIQVELWEN*SVIPRS
Trigger: AGAGCGAGGGATCACTGAGCAGTTTTCCCAGAGCTC...TACTTGTATTGCACAGTGGACACCTCTAGAGGTCCATTGGTTTAAAGGGATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CCA 90 bp TTGCCTGTTCACATCCAGGCGGAGTTAGCCGGCCACAATGAGAATGCTCCTGAGACTAGAGTAACTTTCTaGGTCACGGATGTTCTAAAA +
Preference number: 2 (lower is better)
Translates to: LPVHIQAELAGHNENAPETRVTF*VTDVLK
Trigger: TTTTAGAACATCCGTGACCCAGAAAGTTACTCTAGT...CTCAGGAGCATTCTCATTGTGGCCGGCTAACTCCGCCTGGATGTGAACAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CCA 90 bp ATGGAGCTCTGGGAAAACTGCTCAGTGATCCCTCGCTCTCTCCCCACAAACCCTACACTGGCAAATCAGTaGGTCTTGAGAAGAATTAAA +
Preference number: 2 (lower is better)
Translates to: MELWENCSVIPRSLPTNPTLANQ*VLRRIK
Trigger: TTTAATTCTTCTCAAGACCCACTGATTTGCCAGTGT...AGGGTTTGTGGGGAGAGAGCGAGGGATCACTGAGCAGTTTTCCCAGAGCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CCA 90 bp CCTATCCCTTTAAACCAATGGACCTCTAGAGGTGTCCACTGTGCAATACAAGTAGAGCTTGCCTTCCCATaGAGCTCTGGGAAAACTGCT +
Preference number: 2 (lower is better)
Translates to: PIPLNQWTSRGVHCAIQVELAFP*SSGKTA
Trigger: AGCAGTTTTCCCAGAGCTCCATGGGAAGGCAAGCTC...TACTTGTATTGCACAGTGGACACCTCTAGAGGTCCATTGGTTTAAAGGGATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CAA 90 bp CTGCTACCCTCCCAGAAGAAACCCAGCCTCAGAAATTCTTTCTCTTaGGGCCCAATTCTGCTAGTAGATCACGATTATACAACAGTCCCT +
Preference number: 2 (lower is better)
Translates to: LLPSQKKPSLRNSFS*GPILLVDHDYTTVP
Trigger: AGGGACTGTTGTATAATCGTGATCTACTAGCAGAATTGGGCCCAAAGAGAAAGAATTTCTGAGGCTGGGTTTCTTCTGGGAGGGTAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR TCA 90 bp CCTATCCCTTTAAACCAATGGACCTCTAGAGGTGTCCACTGTGCAATACAAGTACTGTTTTCTCCGGCCTaGTACTTGCTGTTACTCCCT +
Preference number: 2 (lower is better)
Translates to: PIPLNQWTSRGVHCAIQVLFSPA*YLLLLP
Trigger: AGGGAGTAACAGCAAGTATCAGGCCGGAGAAAACAG...TACTTGTATTGCACAGTGGACACCTCTAGAGGTCCATTGGTTTAAAGGGATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR TCA 90 bp CCTATCCCTTTAAACCAATGGACCTCTAGAGGTGTCCACTGTGCAATACAAGTAAGATGGGGCCAGAAATaGGCAGCAGCTTTTTGGAGA +
Preference number: 2 (lower is better)
Translates to: PIPLNQWTSRGVHCAIQVRWGQK*AAAFWR
Trigger: TCTCCAAAAAGCTGCTGCTCATTTCTGGCCCCATCT...TACTTGTATTGCACAGTGGACACCTCTAGAGGTCCATTGGTTTAAAGGGATAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR TCA 90 bp ACTGCGTACTGGCCTGGATGGTGGTTACAGAGACTGCAAATAACCTACATCATTCAGGTTTCCCAAAATTaGTGGCAGAAGATTGGCAAT +
Preference number: 2 (lower is better)
Translates to: TAYWPGWWLQRLQITYIIQVSQN*WQKIGN
Trigger: ATTGCCAATCTTCTGCCATCAATTTTGGGAAACCTG...AATGATGTAGGTTATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTACGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CCA 90 bp CCTATCCCTTTAAACCAATGGACCTCTAGAGGTGTCCACTGTGCAATACAAGTATACTGGCCTGGATGGTaGTTACAGAGACTGCAAATA +
Preference number: 2 (lower is better)
Translates to: PIPLNQWTSRGVHCAIQVYWPGW*LQRLQI
Trigger: TATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTA...TACTTGTATTGCACAGTGGACACCTCTAGAGGTCCATTGGTTTAAAGGGATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR GCA 90 bp CCTATCCCTTTAAACCAATGGACCTCTAGAGGTGTCCACTGTGCAATACAAGTAAATGGAAATAACGTGTaGCTTCAAAACACATTTAGG +
Preference number: 2 (lower is better)
Translates to: PIPLNQWTSRGVHCAIQVNGNNV*LQNTFR
Trigger: CCTAAATGTGTTTTGAAGGCACACGTTATTTCCATT...TACTTGTATTGCACAGTGGACACCTCTAGAGGTCCATTGGTTTAAAGGGATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CCA 72 bp CCATTGGGAGGGAGAGCTTGCCTTCCCATGGAGCTCTaGGAAAACTGCTCAGTGATCCCTCGCTCTCTCCCC +
Preference number: 3 (lower is better)
Translates to: PLGGRACLPMEL*ENCSVIPRSLP
Trigger: GGGGAGAGAGCGAGGGATCACTGAGCAGTTTTCCCAGAGCTCCATGGGAAGGCAAGCTCTCCCTCCCAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CAA 90 bp ACATCCCAGCTGGTCATGCCCCTGGTCAGGTCGCAGGCAAACACTAAGGCAGAATGGGTCCCACAGGTGTaGGCAACTTGGGTAGAGCGT +
Preference number: 3 (lower is better)
Translates to: TSQLVMPLVRSQANTKAEWVPQV*ATWVER
Trigger: ACGCTCTACCCAAGTTGCCAACACCTGTGGGACCCA...TTCTGCCTTAGTGTTTGCCTGCGACCTGACCAGGGGCATGACCAGCTGGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR GCA 72 bp GGGAGAGCTTGCCTTCCCATGGAGCTCTGGGAAAACTaGTCAGTGATCCCTCGCTCTCTCCCCACAAACCCT +
Preference number: 3 (lower is better)
Translates to: GRACLPMELWEN*SVIPRSLPTNP
Trigger: AGGGTTTGTGGGGAGAGAGCGAGGGATCACTGAGCAGTTTTCCCAGAGCTCCATGGGAAGGCAAGCTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CAA 90 bp TTTGGAGAGGAAAGGCCTGTGCTGCAGGCCAGACTTCCAGGAAGAAGCAACATAGCTCCAGCACTGGCCTaGCTTGGGGTAAGGGAGGGA +
Preference number: 3 (lower is better)
Translates to: FGEERPVLQARLPGRSNIAPALA*LGVREG
Trigger: TCCCTCCCTTACCCCAAGCAAGGCCAGTGCTGGAGC...TATGTTGCTTCTTCCTGGAAGTCTGGCCTGCAGCACAGGCCTTTCCTCTCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR TCA 72 bp GCCCAGACCTCATCCACTATGACAAGTCAGCTATGCTaGGGAAAGGCAGCCTCGGGGGCACAAAGGCAGGTT +
Preference number: 3 (lower is better)
Translates to: AQTSSTMTSQLC*GKAASGAQRQV
Trigger: AACCTGCCTTTGTGCCCCCGAGGCTGCCTTTCCTCAGCATAGCTGACTTGTCATAGTGGATGAGGTCTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR TCA 72 bp TGGCTTCTACTGCTCCAGCCCAGACCTCATCCACTATaGCAAGTCAGCTATGCTGAGGAAAGGCAGCCTCGG +
Preference number: 3 (lower is better)
Translates to: WLLLLQPRPHPL*QVSYAEERQPR
Trigger: CCGAGGCTGCCTTTCCTCAGCATAGCTGACTTGTCATAGTGGATGAGGTCTGGGCTGGAGCAGTAGAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR GCA 72 bp GTAGGGAATCCCATCCCTTGGTCCCCAGCTAAATACTaGGTACTGGCCTGGATGGTGGTTACAGAGACTGCA +
Preference number: 3 (lower is better)
Translates to: VGNPIPWSPAKY*VLAWMVVTETA
Trigger: TGCAGTCTCTGTAACCACCATCCAGGCCAGTACGCAGTATTTAGCTGGGGACCAAGGGATGGGATTCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR GCA 72 bp CACTGGTGGGAAACAGAGCACTGGCCAAGACCAACCTaGTACCCTCCCAGAAGAAACCCAGCCTCAGAAATT +
Preference number: 3 (lower is better)
Translates to: HWWETEHWPRPT*YPPRRNPASEI
Trigger: AATTTCTGAGGCTGGGTTTCTTCTGGGAGGGTAGCAGGTTGGTCTTGGCCAGTGCTCTGTTTCCCACCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR TCA 72 bp GCAGCCTCGGGGGCACAAAGGCAGGTTTCCCAAAATTaGTGGCAGAAGATTGGCAATCCATCTAGGTGGAAG +
Preference number: 3 (lower is better)
Translates to: AASGAQRQVSQN*WQKIGNPSRWK
Trigger: CTTCCACCTAGATGGATTGCCAATCTTCTGCCATCAATTTTGGGAAACCTGCCTTTGTGCCCCCGAGGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR GCA 72 bp ACTGTGCAATACAAGTACGTGACTCATTTCCCACTGTaGTTGCCTGTTCACATCCAGGCGGAGTTAGCCGGC +
Preference number: 3 (lower is better)
Translates to: TVQYKYVTHFPL*LPVHIQAELAG
Trigger: GCCGGCTAACTCCGCCTGGATGTGAACAGGCAAGCACAGTGGGAAATGAGTCACGTACTTGTATTGCACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CAA 90 bp GCTGGAAAAGGGAACAACACTGGTGGGAAACAGAGCACTGGCCAAGACCAACCTGTTCCCAAATGTCACTaGACATCCCAGCTGGTCATG +
Preference number: 3 (lower is better)
Translates to: AGKGNNTGGKQSTGQDQPVPKCH*TSQLVM
Trigger: CATGACCAGCTGGGATGTCAAGTGACATTTGGGAAC...AGGTTGGTCTTGGCCAGTGCTCTGTTTCCCACCAGTGTTGTTCCCTTTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CAA 90 bp TTGCCTGTTCACATCCAGGCGGAGTTAGCCGGCCACAATGAGAATGCTCCTGAGAGAAGGGGTGGCATTTaGTTCTGTTTCTTAGCAGCA +
Preference number: 3 (lower is better)
Translates to: LPVHIQAELAGHNENAPERRGGI*FCFLAA
Trigger: TGCTGCTAAGAAACAGAACAAAATGCCACCCCTTCT...CTCAGGAGCATTCTCATTGTGGCCGGCTAACTCCGCCTGGATGTGAACAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR GCA 72 bp GGAATGGCTTTATCCTGTTTTCTCCGGCCTGATACTTaGTGTTACTCCCTTGATCCGGAGGCAATGGCTGCT +
Preference number: 3 (lower is better)
Translates to: GMALSCFLRPDT*CYSLDPEAMAA
Trigger: AGCAGCCATTGCCTCCGGATCAAGGGAGTAACAGCAAGTATCAGGCCGGAGAAAACAGGATAAAGCCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CCA 72 bp GTAACTTTCTGGGTCACGGATGTTCTAAAACTCACCTaGGTCCCACAGGTGTTGGCAACTTGGGTAGAGCGT +
Preference number: 3 (lower is better)
Translates to: VTFWVTDVLKLT*VPQVLATWVER
Trigger: ACGCTCTACCCAAGTTGCCAACACCTGTGGGACCCAGGTGAGTTTTAGAACATCCGTGACCCAGAAAGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CCA 72 bp ATCCCATCCCTTGGTCCCCAGCTAAATACTGCGTACTaGCCTGGATGGTGGTTACAGAGACTGCAAATAACC +
Preference number: 3 (lower is better)
Translates to: IPSLGPQLNTAY*PGWWLQRLQIT
Trigger: GGTTATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTACGCAGTATTTAGCTGGGGACCAAGGGATGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CAA 90 bp AGCAAGTCATTAGGAAAATGCCCACTCATGCCCCAACCTGCCTTTCTAAAGTCACTTGCTGTTACTCCCTaGATCCGGAGGCAATGGCTG +
Preference number: 3 (lower is better)
Translates to: SKSLGKCPLMPQPAFLKSLAVTP*IRRQWL
Trigger: CAGCCATTGCCTCCGGATCAAGGGAGTAACAGCAAG...TGACTTTAGAAAGGCAGGTTGGGGCATGAGTGGGCATTTTCCTAATGACTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR TCA 72 bp CTGGAAAGAGTTCTAGGTTGGGGCTCCCGCAAACTGTaGCTCGCTTTCTGTTTAAACAAAGCCCCTCCCTTT +
Preference number: 3 (lower is better)
Translates to: LERVLGWGSRKL*LAFCLNKAPPF
Trigger: AAAGGGAGGGGCTTTGTTTAAACAGAAAGCGAGTCACAGTTTGCGGGAGCCCCAACCTAGAACTCTTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CCA 72 bp CTAAAACTCACCTGGGTCCCACAGGTGTTGGCAACTTaGGTAGAGCGTGAGTGTTCTCTGGAAAGAGTTCTA +
Preference number: 3 (lower is better)
Translates to: LKLTWVPQVLAT*VERECSLERVL
Trigger: TAGAACTCTTTCCAGAGAACACTCACGCTCTACCCAAGTTGCCAACACCTGTGGGACCCAGGTGAGTTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CAA 90 bp CCTATCCCTTTAAACCAATGGACCTCTAGAGGTGTCCACTGTGCAATACAAGTAGGAAAGAGTTCTAGGTaGGGGCTCCCGCAAACTGTG +
Preference number: 3 (lower is better)
Translates to: PIPLNQWTSRGVHCAIQVGKSSR*GLPQTV
Trigger: CACAGTTTGCGGGAGCCCCAACCTAGAACTCTTTCC...TACTTGTATTGCACAGTGGACACCTCTAGAGGTCCATTGGTTTAAAGGGATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CAA 90 bp ACATCCCAGCTGGTCATGCCCCTGGTCAGGTCGCAGGCAAACACTAAGGCAGAATGTACACCAAATCCTTaGGTTCATTTAACACTAGAG +
Preference number: 3 (lower is better)
Translates to: TSQLVMPLVRSQANTKAECTPNP*VHLTLE
Trigger: CTCTAGTGTTAAATGAACCAAAGGATTTGGTGTACA...TTCTGCCTTAGTGTTTGCCTGCGACCTGACCAGGGGCATGACCAGCTGGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CCA 72 bp ATCCCTTGGTCCCCAGCTAAATACTGCGTACTGGCCTaGATGGTGGTTACAGAGACTGCAAATAACCTACAT +
Preference number: 3 (lower is better)
Translates to: IPWSPAKYCVLA*MVVTETANNLH
Trigger: ATGTAGGTTATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTACGCAGTATTTAGCTGGGGACCAAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CAA 90 bp AGCAAGTCATTAGGAAAATGCCCACTCATGCCCCAACCTGCCTTTCTAAAGTCATGTTTCTTAGCAGCATaGTCTACATGCGGCCTGACG +
Preference number: 3 (lower is better)
Translates to: SKSLGKCPLMPQPAFLKSCFLAA*STCGLT
Trigger: CGTCAGGCCGCATGTAGACAATGCTGCTAAGAAACA...TGACTTTAGAAAGGCAGGTTGGGGCATGAGTGGGCATTTTCCTAATGACTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CCA 72 bp CAGAAGATTGGCAATCCATCTAGGTGGAAGGAGGAATaGCTTTATCCTGTTTTCTCCGGCCTGATACTTGCT +
Preference number: 3 (lower is better)
Translates to: QKIGNPSRWKEE*LYPVFSGLILA
Trigger: AGCAAGTATCAGGCCGGAGAAAACAGGATAAAGCCATTCCTCCTTCCACCTAGATGGATTGCCAATCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CAA 90 bp AGCAAGTCATTAGGAAAATGCCCACTCATGCCCCAACCTGCCTTTCTAAAGTCAATTGATGGCAGAAGATaGGCAATCCATCTAGGTGGA +
Preference number: 3 (lower is better)
Translates to: SKSLGKCPLMPQPAFLKSIDGRR*AIHLGG
Trigger: TCCACCTAGATGGATTGCCAATCTTCTGCCATCAAT...TGACTTTAGAAAGGCAGGTTGGGGCATGAGTGGGCATTTTCCTAATGACTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR TCA 72 bp CCAGTGTGGAGGACGCTTAGGAAACAGCATCCGAAGTaGACGCACAGACAAGACAGCCTTAATAAATTAGTA +
Preference number: 3 (lower is better)
Translates to: PVWRTLRKQHPK*THRQDSLNKLV
Trigger: TACTAATTTATTAAGGCTGTCTTGTCTGTGCGTTCACTTCGGATGCTGTTTCCTAAGCGTCCTCCACACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR GCA 72 bp GGCATTTTGTTCTGTTTCTTAGCAGCATTGTCTACATaGGGCCTGACGGTCTCCTTCCCTGGGAAATTTAAA +
Preference number: 3 (lower is better)
Translates to: GILFCFLAALST*GLTVSFPGKFK
Trigger: TTTAAATTTCCCAGGGAAGGAGACCGTCAGGCCGCATGTAGACAATGCTGCTAAGAAACAGAACAAAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR GCA 72 bp CAAGTCATTAGGAAAATGCCCACTCATGCCCCAACCTaGCTTTCTAAAGTCAGAATGACAATGGAAATAACG +
Preference number: 3 (lower is better)
Translates to: QVIRKMPTHAPT*LSKVRMTMEIT
Trigger: CGTTATTTCCATTGTCATTCTGACTTTAGAAAGGCAGGTTGGGGCATGAGTGGGCATTTTCCTAATGACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CCA 72 bp AAATCCTTTGGTTCATTTAACACTAGAGTAACTTTCTaGGTCACGGATGTTCTAAAACTCACCTGGGTCCCA +
Preference number: 3 (lower is better)
Translates to: KSFGSFNTRVTF*VTDVLKLTWVP
Trigger: TGGGACCCAGGTGAGTTTTAGAACATCCGTGACCCAGAAAGTTACTCTAGTGTTAAATGAACCAAAGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR-3UTR CAA 90 bp CCTATCCCTTTAAACCAATGGACCTCTAGAGGTGTCCACTGTGCAATACAAGTAGCAAATCAGTGGGTCTaGAGAAGAATTAAACTTTCA +
Preference number: 3 (lower is better)
Translates to: PIPLNQWTSRGVHCAIQVANQWV*RRIKLS
Trigger: TGAAAGTTTAATTCTTCTCAAGACCCACTGATTTGC...TACTTGTATTGCACAGTGGACACCTCTAGAGGTCCATTGGTTTAAAGGGATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR TCA 72 bp ACCAGCAAACACCTCCGTACTAGACAGTTATTAGTTTaGCTCAAGGGCATAAAGAAAACTCAGATACTAGAT +
Preference number: 3 (lower is better)
Translates to: TSKHLRTRQLLV*LKGIKKTQILD
Trigger: ATCTAGTATCTGAGTTTTCTTTATGCCCTTGAGTCAAACTAATAACTGTCTAGTACGGAGGTGTTTGCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp CCATCCCTTGGTCCCCAGCTAAATACTGCGTACTGGCCTGGATGGTGGTTACAGCGTACCCGACGGGAGTaGGAAGCGGAGGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: PSLGPQLNTAYWPGWWLQRTRRE*EAEGEG
Trigger: CCCCTCTCCCTCCGCTTCGCACTCCCGTCGGGTACG...CTGTAACCACCATCCAGGCCAGTACGCAGTATTTAGCTGGGGACCAAGGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp ATGGAGCTCTGGGAAAACTGCTCAGTGATCCCTCGCTCTCTCCCCACAAACCCTATTCGGCGGCTCCATTaGGACCCGTGGCGACGGCGG +
Preference number: 4 (lower is better)
Translates to: MELWENCSVIPRSLPTNPIRRLH*DPWRRR
Trigger: CCGCCGTCGCCACGGGTCCCAATGGAGCCGCCGAAT...AGGGTTTGTGGGGAGAGAGCGAGGGATCACTGAGCAGTTTTCCCAGAGCTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR TCA 90 bp CCATCCCTTGGTCCCCAGCTAAATACTGCGTACTGGCCTGGATGGTGGTTACAGAAGGAAAAGCCCTGGTaGGGCAGGGCGGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PSLGPQLNTAYWPGWWLQKEKPW*GRAVPG
Trigger: GCCTGGGACCGCCCTGCCTCACCAGGGCTTTTCCTT...CTGTAACCACCATCCAGGCCAGTACGCAGTATTTAGCTGGGGACCAAGGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp TTGCCTGTTCACATCCAGGCGGAGTTAGCCGGCCACAATGAGAATGCTCCTGAGTCTGGCCGTTGGGTCTaGCCACGGAGCTCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LPVHIQAELAGHNENAPESGRWV*PRSSLL
Trigger: CAGGAGGGAGCTCCGTGGGCAGACCCAACGGCCAGA...CTCAGGAGCATTCTCATTGTGGCCGGCTAACTCCGCCTGGATGTGAACAGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp TTTGGAGAGGAAAGGCCTGTGCTGCAGGCCAGACTTCCAGGAAGAAGCAACATACTCCATTGGGACCCGTaGCGACGGCGGCCACGACGG +
Preference number: 4 (lower is better)
Translates to: FGEERPVLQARLPGRSNILHWDP*RRRPRR
Trigger: CCGTCGTGGCCGCCGTCGCCACGGGTCCCAATGGAG...TATGTTGCTTCTTCCTGGAAGTCTGGCCTGCAGCACAGGCCTTTCCTCTCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp ATGGAGCTCTGGGAAAACTGCTCAGTGATCCCTCGCTCTCTCCCCACAAACCCTCATCCCAGCTGGTCATaGCCCTGGTCAGGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: MELWENCSVIPRSLPTNPHPSWS*PWSGRR
Trigger: CCTGCGACCTGACCAGGGGCATGACCAGCTGGGATG...AGGGTTTGTGGGGAGAGAGCGAGGGATCACTGAGCAGTTTTCCCAGAGCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR TCA 90 bp TTGCCTGTTCACATCCAGGCGGAGTTAGCCGGCCACAATGAGAATGCTCCTGAGACTTCTGGGAGGGGGTaGTGGTCTCATCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LPVHIQAELAGHNENAPETSGRG*WSHPSS
Trigger: GGAGGAGGGATGAGACCATCACCCCCTCCCAGAAGT...CTCAGGAGCATTCTCATTGTGGCCGGCTAACTCCGCCTGGATGTGAACAGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp AGCCCAGACCTCATCCACTATGACAAGTCAGCTATGCTGAGGAAAGGCAGCCTCCAGGAGGGGCCGAAGTaGCTGTCCAAAGGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: SPDLIHYDKSAMLRKGSLQEGPK*LSKGRG
Trigger: TCCACGCCCTTTGGACAGGCACTTCGGCCCCTCCTG...GAGGCTGCCTTTCCTCAGCATAGCTGACTTGTCATAGTGGATGAGGTCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp ACATCCCAGCTGGTCATGCCCCTGGTCAGGTCGCAGGCAAACACTAAGGCAGAACCGAGATCATGCCACTaGACACCAGCCTGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: TSQLVMPLVRSQANTKAEPRSCH*TPAWVV
Trigger: TACCACCCAGGCTGGTGTGCAGTGGCATGATCTCGG...TTCTGCCTTAGTGTTTGCCTGCGACCTGACCAGGGGCATGACCAGCTGGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp CCATCCCTTGGTCCCCAGCTAAATACTGCGTACTGGCCTGGATGGTGGTTACAGTCGCCCAGGCTGGAGTaGACTGGTACGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: PSLGPQLNTAYWPGWWLQSPRLE*TGTISA
Trigger: AGCCGAGATCGTACCAGTGCACTCCAGCCTGGGCGA...CTGTAACCACCATCCAGGCCAGTACGCAGTATTTAGCTGGGGACCAAGGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp AGCCCAGACCTCATCCACTATGACAAGTCAGCTATGCTGAGGAAAGGCAGCCTCTCTGGAGCAGGACCCTaGAAGACAGAGCCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SPDLIHYDKSAMLRKGSLSGAGP*KTEPGQ
Trigger: CTGGCCCGGCTCTGTCTTCCAGGGTCCTGCTCCAGA...GAGGCTGCCTTTCCTCAGCATAGCTGACTTGTCATAGTGGATGAGGTCTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR TCA 90 bp TTTGGAGAGGAAAGGCCTGTGCTGCAGGCCAGACTTCCAGGAAGAAGCAACATACCTGGAGGCTGGATCTaGATGGAGTCCAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: FGEERPVLQARLPGRSNIPGGWI*MESRRG
Trigger: GCCCCTCCTGGACTCCATTCAGATCCAGCCTCCAGG...TATGTTGCTTCTTCCTGGAAGTCTGGCCTGCAGCACAGGCCTTTCCTCTCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp AGCCCAGACCTCATCCACTATGACAAGTCAGCTATGCTGAGGAAAGGCAGCCTCCACTGCACACCAGCCTaGGTGGTAGAGCGAGACTCC +
Preference number: 4 (lower is better)
Translates to: SPDLIHYDKSAMLRKGSLHCTPA*VVERDS
Trigger: GGAGTCTCGCTCTACCACCCAGGCTGGTGTGCAGTG...GAGGCTGCCTTTCCTCAGCATAGCTGACTTGTCATAGTGGATGAGGTCTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CAA 72 bp GTTAGTGACAGTGGGGCTCCCATTGGGAGGGAGAGCTaGCCTTCCCATGGAGCTCTGGGAAAACTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: VSDSGAPIGRES*PSHGALGKLLS
Trigger: ACTGAGCAGTTTTCCCAGAGCTCCATGGGAAGGCAAGCTCTCCCTCCCAATGGGAGCCCCACTGTCACTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR TCA 90 bp TTTGGAGAGGAAAGGCCTGTGCTGCAGGCCAGACTTCCAGGAAGAAGCAACATATGTCTACATGCGGCCTaGCGGTCTCCTTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: FGEERPVLQARLPGRSNICLHAA*RSPSLG
Trigger: TCCCAGGGAAGGAGACCGTCAGGCCGCATGTAGACA...TATGTTGCTTCTTCCTGGAAGTCTGGCCTGCAGCACAGGCCTTTCCTCTCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR TCA 90 bp GCTGGAAAAGGGAACAACACTGGTGGGAAACAGAGCACTGGCCAAGACCAACCTACAAGTCAGCTATGCTaGGGAAAGGCAGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: AGKGNNTGGKQSTGQDQPTSQLC*GKAASG
Trigger: CCCCGAGGCTGCCTTTCCTCAGCATAGCTGACTTGT...AGGTTGGTCTTGGCCAGTGCTCTGTTTCCCACCAGTGTTGTTCCCTTTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR TCA 90 bp AGCCCAGACCTCATCCACTATGACAAGTCAGCTATGCTGAGGAAAGGCAGCCTCCAAGGATGTCAGACCTaGGACTCGGGTACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SPDLIHYDKSAMLRKGSLQGCQT*DSGTWQ
Trigger: CTGCCAGGTACCCGAGTCTCAGGTCTGACATCCTTG...GAGGCTGCCTTTCCTCAGCATAGCTGACTTGTCATAGTGGATGAGGTCTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp AGCCCAGACCTCATCCACTATGACAAGTCAGCTATGCTGAGGAAAGGCAGCCTCGGGCCTAAGGGTGCCTaGTGGAAGAAGCAAACCAGC +
Preference number: 4 (lower is better)
Translates to: SPDLIHYDKSAMLRKGSLGPKGA*WKKQTS
Trigger: GCTGGTTTGCTTCTTCCAGCAGGCACCCTTAGGCCC...GAGGCTGCCTTTCCTCAGCATAGCTGACTTGTCATAGTGGATGAGGTCTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp GCTGGAAAAGGGAACAACACTGGTGGGAAACAGAGCACTGGCCAAGACCAACCTAGCACTGGCCTTGCTTaGGGTAAGGGAGGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: AGKGNNTGGKQSTGQDQPSTGLA*GKGGKV
Trigger: CACCTTCCCTCCCTTACCCCAAGCAAGGCCAGTGCT...AGGTTGGTCTTGGCCAGTGCTCTGTTTCCCACCAGTGTTGTTCCCTTTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp AGCCCAGACCTCATCCACTATGACAAGTCAGCTATGCTGAGGAAAGGCAGCCTCTTGATCCGGAGGCAATaGCTGCTCCAGCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: SPDLIHYDKSAMLRKGSLLIRRQ*LLQHWP
Trigger: AGGCCAGTGCTGGAGCAGCCATTGCCTCCGGATCAA...GAGGCTGCCTTTCCTCAGCATAGCTGACTTGTCATAGTGGATGAGGTCTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR TCA 90 bp GCTGGAAAAGGGAACAACACTGGTGGGAAACAGAGCACTGGCCAAGACCAACCTTTGCTGTTACTCCCTTaGTCCGGAGGCAATGGCTGC +
Preference number: 4 (lower is better)
Translates to: AGKGNNTGGKQSTGQDQPLLLLP*SGGNGC
Trigger: GCAGCCATTGCCTCCGGATCAAGGGAGTAACAGCAA...AGGTTGGTCTTGGCCAGTGCTCTGTTTCCCACCAGTGTTGTTCCCTTTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp GCTGGAAAAGGGAACAACACTGGTGGGAAACAGAGCACTGGCCAAGACCAACCTGCAGCATTGTCTACATaGGGCCTGACGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: AGKGNNTGGKQSTGQDQPAALST*GLTVSF
Trigger: GAAGGAGACCGTCAGGCCGCATGTAGACAATGCTGC...AGGTTGGTCTTGGCCAGTGCTCTGTTTCCCACCAGTGTTGTTCCCTTTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp TTTGGAGAGGAAAGGCCTGTGCTGCAGGCCAGACTTCCAGGAAGAAGCAACATATGTGAGCCGAGATCATaGCACTGCACACCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: FGEERPVLQARLPGRSNICEPRS*HCTPAW
Trigger: CCAGGCTGGTGTGCAGTGGCATGATCTCGGCTCACA...TATGTTGCTTCTTCCTGGAAGTCTGGCCTGCAGCACAGGCCTTTCCTCTCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp ATGGAGCTCTGGGAAAACTGCTCAGTGATCCCTCGCTCTCTCCCCACAAACCCTTGGCCAAGACCAACCTaGTACCCTCCCAGAAGAAAC +
Preference number: 4 (lower is better)
Translates to: MELWENCSVIPRSLPTNPWPRPT*YPPRRN
Trigger: GTTTCTTCTGGGAGGGTAGCAGGTTGGTCTTGGCCA...AGGGTTTGTGGGGAGAGAGCGAGGGATCACTGAGCAGTTTTCCCAGAGCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp ATGGAGCTCTGGGAAAACTGCTCAGTGATCCCTCGCTCTCTCCCCACAAACCCTGAGCTCTGGGAAAACTaGTCAGTGATCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: MELWENCSVIPRSLPTNPELWEN*SVIPRS
Trigger: AGAGCGAGGGATCACTGAGCAGTTTTCCCAGAGCTC...AGGGTTTGTGGGGAGAGAGCGAGGGATCACTGAGCAGTTTTCCCAGAGCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp CCATCCCTTGGTCCCCAGCTAAATACTGCGTACTGGCCTGGATGGTGGTTACAGATTTCCCACTGTGCTTaGCTGTTCACATCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PSLGPQLNTAYWPGWWLQISHCA*LFTSRR
Trigger: CCGCCTGGATGTGAACAGGCAAGCACAGTGGGAAAT...CTGTAACCACCATCCAGGCCAGTACGCAGTATTTAGCTGGGGACCAAGGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp CCTATCCCTTTAAACCAATGGACCTCTAGAGGTGTCCACTGTGCAATACAAGTACACCCGGCAGCGGCTTaGACCTTCCCGTACCCGACG +
Preference number: 4 (lower is better)
Translates to: PIPLNQWTSRGVHCAIQVHPAAA*TFPYPT
Trigger: CGTCGGGTACGGGAAGGTCCAAGCCGCTGCCGGGTG...TACTTGTATTGCACAGTGGACACCTCTAGAGGTCCATTGGTTTAAAGGGATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp TTGCCTGTTCACATCCAGGCGGAGTTAGCCGGCCACAATGAGAATGCTCCTGAGATCAACCACAGAGTCTaGAGGCCCAAGCAATGTCCC +
Preference number: 4 (lower is better)
Translates to: LPVHIQAELAGHNENAPEINHRV*RPKQCP
Trigger: GGGACATTGCTTGGGCCTCCAGACTCTGTGGTTGAT...CTCAGGAGCATTCTCATTGTGGCCGGCTAACTCCGCCTGGATGTGAACAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp ATGGAGCTCTGGGAAAACTGCTCAGTGATCCCTCGCTCTCTCCCCACAAACCCTGCGTACTGGCCTGGATaGTGGTTACAGAGACTGCAA +
Preference number: 4 (lower is better)
Translates to: MELWENCSVIPRSLPTNPAYWPG*WLQRLQ
Trigger: TTGCAGTCTCTGTAACCACCATCCAGGCCAGTACGC...AGGGTTTGTGGGGAGAGAGCGAGGGATCACTGAGCAGTTTTCCCAGAGCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR TCA 90 bp TTGCCTGTTCACATCCAGGCGGAGTTAGCCGGCCACAATGAGAATGCTCCTGAGGGCTCCCGCAAACTGTaGCTCGCTTTCTGTTTAAAC +
Preference number: 4 (lower is better)
Translates to: LPVHIQAELAGHNENAPEGSRKL*LAFCLN
Trigger: GTTTAAACAGAAAGCGAGTCACAGTTTGCGGGAGCC...CTCAGGAGCATTCTCATTGTGGCCGGCTAACTCCGCCTGGATGTGAACAGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR TCA 90 bp ATGGAGCTCTGGGAAAACTGCTCAGTGATCCCTCGCTCTCTCCCCACAAACCCTCTGTTTTCTCCGGCCTaGTACTTGCTGTTACTCCCT +
Preference number: 4 (lower is better)
Translates to: MELWENCSVIPRSLPTNPLFSPA*YLLLLP
Trigger: AGGGAGTAACAGCAAGTATCAGGCCGGAGAAAACAG...AGGGTTTGTGGGGAGAGAGCGAGGGATCACTGAGCAGTTTTCCCAGAGCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR TCA 90 bp ATGGAGCTCTGGGAAAACTGCTCAGTGATCCCTCGCTCTCTCCCCACAAACCCTGACAGCTCCTCTAGCTaGGACTCTGATGATGCCAAA +
Preference number: 4 (lower is better)
Translates to: MELWENCSVIPRSLPTNPDSSSS*DSDDAK
Trigger: TTTGGCATCATCAGAGTCTCAGCTAGAGGAGCTGTC...AGGGTTTGTGGGGAGAGAGCGAGGGATCACTGAGCAGTTTTCCCAGAGCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp CCATCCCTTGGTCCCCAGCTAAATACTGCGTACTGGCCTGGATGGTGGTTACAGTGGATGTGTGCCAGATaGCTTCCAGTTGTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PSLGPQLNTAYWPGWWLQWMCAR*LPVVSP
Trigger: TGGGGAAACAACTGGAAGGCATCTGGCACACATCCA...CTGTAACCACCATCCAGGCCAGTACGCAGTATTTAGCTGGGGACCAAGGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp TTTGGAGAGGAAAGGCCTGTGCTGCAGGCCAGACTTCCAGGAAGAAGCAACATACCTGTCCAAAGGGCGTaGAGAGAACTTCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: FGEERPVLQARLPGRSNIPVQRA*RELQRA
Trigger: TGCCCTCTGAAGTTCTCTCCACGCCCTTTGGACAGG...TATGTTGCTTCTTCCTGGAAGTCTGGCCTGCAGCACAGGCCTTTCCTCTCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp ACTGCGTACTGGCCTGGATGGTGGTTACAGAGACTGCAAATAACCTACATCATTGTTAGCTCTGGCCGTTaGGTCTGCCCACGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: TAYWPGWWLQRLQITYIIVSSGR*VCPRSS
Trigger: GGAGCTCCGTGGGCAGACCCAACGGCCAGAGCTAAC...AATGATGTAGGTTATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTACGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp ACATCCCAGCTGGTCATGCCCCTGGTCAGGTCGCAGGCAAACACTAAGGCAGAACTAAATACTGCGTACTaGCCTGGATGGTGGTTACAG +
Preference number: 4 (lower is better)
Translates to: TSQLVMPLVRSQANTKAELNTAY*PGWWLQ
Trigger: CTGTAACCACCATCCAGGCCAGTACGCAGTATTTAG...TTCTGCCTTAGTGTTTGCCTGCGACCTGACCAGGGGCATGACCAGCTGGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp ATGGAGCTCTGGGAAAACTGCTCAGTGATCCCTCGCTCTCTCCCCACAAACCCTCTTCCCATGGAGCTCTaGGAAAACTGCTCAGTGATC +
Preference number: 4 (lower is better)
Translates to: MELWENCSVIPRSLPTNPLPMEL*ENCSVI
Trigger: GATCACTGAGCAGTTTTCCCAGAGCTCCATGGGAAG...AGGGTTTGTGGGGAGAGAGCGAGGGATCACTGAGCAGTTTTCCCAGAGCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp ACATCCCAGCTGGTCATGCCCCTGGTCAGGTCGCAGGCAAACACTAAGGCAGAAATGCTCCTGAGGTGCTaGGACAGACAGAAATATGAG +
Preference number: 4 (lower is better)
Translates to: TSQLVMPLVRSQANTKAEMLLRC*DRQKYE
Trigger: CTCATATTTCTGTCTGTCCCAGCACCTCAGGAGCAT...TTCTGCCTTAGTGTTTGCCTGCGACCTGACCAGGGGCATGACCAGCTGGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR TCA 90 bp ATGGAGCTCTGGGAAAACTGCTCAGTGATCCCTCGCTCTCTCCCCACAAACCCTAACTTGGGTAGAGCGTaGGTGTTCTCTGGAAAGAGT +
Preference number: 4 (lower is better)
Translates to: MELWENCSVIPRSLPTNPNLGRA*VFSGKS
Trigger: ACTCTTTCCAGAGAACACTCACGCTCTACCCAAGTT...AGGGTTTGTGGGGAGAGAGCGAGGGATCACTGAGCAGTTTTCCCAGAGCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR TCA 90 bp TTTGGAGAGGAAAGGCCTGTGCTGCAGGCCAGACTTCCAGGAAGAAGCAACATAGTAAGGGAGGGAAGGTaGGGGTTGTGGCTAAAGAGT +
Preference number: 4 (lower is better)
Translates to: FGEERPVLQARLPGRSNIVREGR*GLWLKS
Trigger: ACTCTTTAGCCACAACCCTCACCTTCCCTCCCTTAC...TATGTTGCTTCTTCCTGGAAGTCTGGCCTGCAGCACAGGCCTTTCCTCTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR TCA 90 bp ATGGAGCTCTGGGAAAACTGCTCAGTGATCCCTCGCTCTCTCCCCACAAACCCTAGACCTCATCCACTATaGCAAGTCAGCTATGCTGAG +
Preference number: 4 (lower is better)
Translates to: MELWENCSVIPRSLPTNPRPHPL*QVSYAE
Trigger: CTCAGCATAGCTGACTTGTCATAGTGGATGAGGTCT...AGGGTTTGTGGGGAGAGAGCGAGGGATCACTGAGCAGTTTTCCCAGAGCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp ACATCCCAGCTGGTCATGCCCCTGGTCAGGTCGCAGGCAAACACTAAGGCAGAAACAACTATGGATGTGTaGCAGATGCCTTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: TSQLVMPLVRSQANTKAETTMDV*QMPSSC
Trigger: ACAACTGGAAGGCATCTGGCACACATCCATAGTTGT...TTCTGCCTTAGTGTTTGCCTGCGACCTGACCAGGGGCATGACCAGCTGGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp TTGCCTGTTCACATCCAGGCGGAGTTAGCCGGCCACAATGAGAATGCTCCTGAGTGGAGATACCACCACTaGCGAAGAAGAACTCATCCT +
Preference number: 4 (lower is better)
Translates to: LPVHIQAELAGHNENAPEWRYHH*RRRTHP
Trigger: AGGATGAGTTCTTCTTCGGCAGTGGTGGTATCTCCA...CTCAGGAGCATTCTCATTGTGGCCGGCTAACTCCGCCTGGATGTGAACAGGCAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp TTTGGAGAGGAAAGGCCTGTGCTGCAGGCCAGACTTCCAGGAAGAAGCAACATATCCCCAGCTAAATACTaGGTACTGGCCTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: FGEERPVLQARLPGRSNISPAKY*VLAWMV
Trigger: CACCATCCAGGCCAGTACGCAGTATTTAGCTGGGGA...TATGTTGCTTCTTCCTGGAAGTCTGGCCTGCAGCACAGGCCTTTCCTCTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp ACATCCCAGCTGGTCATGCCCCTGGTCAGGTCGCAGGCAAACACTAAGGCAGAAAAGTCATTAGGAAAATaGCCACTCATGCCCCAACCT +
Preference number: 4 (lower is better)
Translates to: TSQLVMPLVRSQANTKAEKSLGK*PLMPQP
Trigger: AGGTTGGGGCATGAGTGGGCATTTTCCTAATGACTT...TTCTGCCTTAGTGTTTGCCTGCGACCTGACCAGGGGCATGACCAGCTGGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp AGCCCAGACCTCATCCACTATGACAAGTCAGCTATGCTGAGGAAAGGCAGCCTCCAGGTGTTGGCAACTTaGGTAGAGCGTGAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: SPDLIHYDKSAMLRKGSLQVLAT*VERECS
Trigger: AGAACACTCACGCTCTACCCAAGTTGCCAACACCTG...GAGGCTGCCTTTCCTCAGCATAGCTGACTTGTCATAGTGGATGAGGTCTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp CCATCCCTTGGTCCCCAGCTAAATACTGCGTACTGGCCTGGATGGTGGTTACAGAAAAGGGAACAACACTaGTGGGAAACAGAGCACTGG +
Preference number: 4 (lower is better)
Translates to: PSLGPQLNTAYWPGWWLQKREQH*WETEHW
Trigger: CCAGTGCTCTGTTTCCCACCAGTGTTGTTCCCTTTT...CTGTAACCACCATCCAGGCCAGTACGCAGTATTTAGCTGGGGACCAAGGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp AGCCCAGACCTCATCCACTATGACAAGTCAGCTATGCTGAGGAAAGGCAGCCTCCTAGGGCACAGGCAATaGCACAAATGGCTGCTAGTA +
Preference number: 4 (lower is better)
Translates to: SPDLIHYDKSAMLRKGSLLGHRQ*HKWLLV
Trigger: TACTAGCAGCCATTTGTGCCATTGCCTGTGCCCTAG...GAGGCTGCCTTTCCTCAGCATAGCTGACTTGTCATAGTGGATGAGGTCTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp TTTGGAGAGGAAAGGCCTGTGCTGCAGGCCAGACTTCCAGGAAGAAGCAACATAGAGCTTGCCTTCCCATaGAGCTCTGGGAAAACTGCT +
Preference number: 4 (lower is better)
Translates to: FGEERPVLQARLPGRSNIELAFP*SSGKTA
Trigger: AGCAGTTTTCCCAGAGCTCCATGGGAAGGCAAGCTC...TATGTTGCTTCTTCCTGGAAGTCTGGCCTGCAGCACAGGCCTTTCCTCTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR TCA 90 bp TTGCCTGTTCACATCCAGGCGGAGTTAGCCGGCCACAATGAGAATGCTCCTGAGGTGCCACTTCGTTGCTaGAGGTGTTACAATTGTGTT +
Preference number: 4 (lower is better)
Translates to: LPVHIQAELAGHNENAPEVPLRC*RCYNCV
Trigger: AACACAATTGTAACACCTTCAGCAACGAAGTGGCAC...CTCAGGAGCATTCTCATTGTGGCCGGCTAACTCCGCCTGGATGTGAACAGGCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp ACTGCGTACTGGCCTGGATGGTGGTTACAGAGACTGCAAATAACCTACATCATTGGCCTTGGCTTCTACTaGTCCAGCCCAGACCTCATC +
Preference number: 4 (lower is better)
Translates to: TAYWPGWWLQRLQITYIIGLGFY*SSPDLI
Trigger: GATGAGGTCTGGGCTGGAGCAGTAGAAGCCAAGGCC...AATGATGTAGGTTATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTACGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp AGCAAGTCATTAGGAAAATGCCCACTCATGCCCCAACCTGCCTTTCTAAAGTCAGAGAGGAAAGGCCTGTaGTGCAGGCCAGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: SKSLGKCPLMPQPAFLKSERKGL*CRPDFQ
Trigger: CTGGAAGTCTGGCCTGCAGCACAGGCCTTTCCTCTC...TGACTTTAGAAAGGCAGGTTGGGGCATGAGTGGGCATTTTCCTAATGACTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp CCTATCCCTTTAAACCAATGGACCTCTAGAGGTGTCCACTGTGCAATACAAGTAGCCGGGCCAGGCCTTTaGACAGGTCGTACACGTAGA +
Preference number: 4 (lower is better)
Translates to: PIPLNQWTSRGVHCAIQVAGPGL*TGRTRR
Trigger: TCTACGTGTACGACCTGTCCAAAGGCCTGGCCCGGC...TACTTGTATTGCACAGTGGACACCTCTAGAGGTCCATTGGTTTAAAGGGATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp AGCCCAGACCTCATCCACTATGACAAGTCAGCTATGCTGAGGAAAGGCAGCCTCCCTTGTGCACAACTATaGATGTGTGCCAGATGCCTT +
Preference number: 4 (lower is better)
Translates to: SPDLIHYDKSAMLRKGSLPCAQL*MCARCL
Trigger: AAGGCATCTGGCACACATCCATAGTTGTGCACAAGG...GAGGCTGCCTTTCCTCAGCATAGCTGACTTGTCATAGTGGATGAGGTCTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp ACTGCGTACTGGCCTGGATGGTGGTTACAGAGACTGCAAATAACCTACATCATTGAGGCTGGATCTGAATaGAGTCCAGGAGGGGCCGAA +
Preference number: 4 (lower is better)
Translates to: TAYWPGWWLQRLQITYIIEAGSE*SPGGAE
Trigger: TTCGGCCCCTCCTGGACTCCATTCAGATCCAGCCTC...AATGATGTAGGTTATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTACGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp AGCAAGTCATTAGGAAAATGCCCACTCATGCCCCAACCTGCCTTTCTAAAGTCACACGGAGCTCCCTCCTaGAGGCTGGATCTGAATGGA +
Preference number: 4 (lower is better)
Translates to: SKSLGKCPLMPQPAFLKSHGAPS*RLDLNG
Trigger: TCCATTCAGATCCAGCCTCCAGGAGGGAGCTCCGTG...TGACTTTAGAAAGGCAGGTTGGGGCATGAGTGGGCATTTTCCTAATGACTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp AGCAAGTCATTAGGAAAATGCCCACTCATGCCCCAACCTGCCTTTCTAAAGTCAAGCTGGTCATGCCCCTaGTCAGGTCGCAGGCAAACA +
Preference number: 4 (lower is better)
Translates to: SKSLGKCPLMPQPAFLKSSWSCP*SGRRQT
Trigger: TGTTTGCCTGCGACCTGACCAGGGGCATGACCAGCT...TGACTTTAGAAAGGCAGGTTGGGGCATGAGTGGGCATTTTCCTAATGACTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp CCATCCCTTGGTCCCCAGCTAAATACTGCGTACTGGCCTGGATGGTGGTTACAGATCCCTTTAAACCAATaGACCTCTAGAGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: PSLGPQLNTAYWPGWWLQIPLNQ*TSRGVH
Trigger: GTGGACACCTCTAGAGGTCCATTGGTTTAAAGGGAT...CTGTAACCACCATCCAGGCCAGTACGCAGTATTTAGCTGGGGACCAAGGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CAA 72 bp ACGGATGTTCTAAAACTCACCTGGGTCCCACAGGTGTaGGCAACTTGGGTAGAGCGTGAGTGTTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: TDVLKLTWVPQV*ATWVERECSLE
Trigger: TTCCAGAGAACACTCACGCTCTACCCAAGTTGCCAACACCTGTGGGACCCAGGTGAGTTTTAGAACATCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CAA 72 bp TCAATCATTTGGCCTCTACAAGTTCCCAAATGTCACTaGACATCCCAGCTGGTCATGCCCCTGGTCAGGTCG +
Preference number: 4 (lower is better)
Translates to: SIIWPLQVPKCH*TSQLVMPLVRS
Trigger: CGACCTGACCAGGGGCATGACCAGCTGGGATGTCAAGTGACATTTGGGAACTTGTAGAGGCCAAATGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR TCA 90 bp ATGGAGCTCTGGGAAAACTGCTCAGTGATCCCTCGCTCTCTCCCCACAAACCCTCAGGTTTCCCAAAATTaGTGGCAGAAGATTGGCAAT +
Preference number: 4 (lower is better)
Translates to: MELWENCSVIPRSLPTNPQVSQN*WQKIGN
Trigger: ATTGCCAATCTTCTGCCATCAATTTTGGGAAACCTG...AGGGTTTGTGGGGAGAGAGCGAGGGATCACTGAGCAGTTTTCCCAGAGCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR TCA 90 bp GCTGGAAAAGGGAACAACACTGGTGGGAAACAGAGCACTGGCCAAGACCAACCTGATGATGCCAAACTGTaGTGGCTGATGGCAAAGATA +
Preference number: 4 (lower is better)
Translates to: AGKGNNTGGKQSTGQDQPDDAKL*WLMAKI
Trigger: TATCTTTGCCATCAGCCATCACAGTTTGGCATCATC...AGGTTGGTCTTGGCCAGTGCTCTGTTTCCCACCAGTGTTGTTCCCTTTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp AGCAAGTCATTAGGAAAATGCCCACTCATGCCCCAACCTGCCTTTCTAAAGTCAAGGAAAGGCCTGTGCTaGAGGCCAGACTTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SKSLGKCPLMPQPAFLKSRKGLC*RPDFQE
Trigger: TTCCTGGAAGTCTGGCCTGCAGCACAGGCCTTTCCT...TGACTTTAGAAAGGCAGGTTGGGGCATGAGTGGGCATTTTCCTAATGACTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp CCTATCCCTTTAAACCAATGGACCTCTAGAGGTGTCCACTGTGCAATACAAGTACCGGGCCAGGCAAGCTaGAAAAGGGAACAACACTGG +
Preference number: 4 (lower is better)
Translates to: PIPLNQWTSRGVHCAIQVPGQAS*KREQHW
Trigger: CCAGTGTTGTTCCCTTTTCCAGCTTGCCTGGCCCGG...TACTTGTATTGCACAGTGGACACCTCTAGAGGTCCATTGGTTTAAAGGGATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR TCA 90 bp CCATCCCTTGGTCCCCAGCTAAATACTGCGTACTGGCCTGGATGGTGGTTACAGTGCTGTTCAAGGAAATaGGTGACTCAAATTCTCTCA +
Preference number: 4 (lower is better)
Translates to: PSLGPQLNTAYWPGWWLQCCSRK*VTQILS
Trigger: TGAGAGAATTTGAGTCACTCATTTCCTTGAACAGCA...CTGTAACCACCATCCAGGCCAGTACGCAGTATTTAGCTGGGGACCAAGGGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR TCA 90 bp ACTGCGTACTGGCCTGGATGGTGGTTACAGAGACTGCAAATAACCTACATCATTATGGGGGTAGGCAGTTaGAGCCTGAGCCTGAGTTTA +
Preference number: 4 (lower is better)
Translates to: TAYWPGWWLQRLQITYIIMGVGS*SLSLSL
Trigger: TAAACTCAGGCTCAGGCTTCAACTGCCTACCCCCAT...AATGATGTAGGTTATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTACGCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR TCA 90 bp TTTGGAGAGGAAAGGCCTGTGCTGCAGGCCAGACTTCCAGGAAGAAGCAACATATGCAATACAAGTACGTaGCTCATTTCCCACTGTGCT +
Preference number: 4 (lower is better)
Translates to: FGEERPVLQARLPGRSNICNTST*LISHCA
Trigger: AGCACAGTGGGAAATGAGTCACGTACTTGTATTGCA...TATGTTGCTTCTTCCTGGAAGTCTGGCCTGCAGCACAGGCCTTTCCTCTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp GCTGGAAAAGGGAACAACACTGGTGGGAAACAGAGCACTGGCCAAGACCAACCTAAGAACTCATCCTTGTaGACAACTATGGATGTGTGC +
Preference number: 4 (lower is better)
Translates to: AGKGNNTGGKQSTGQDQPKNSSL*TTMDVC
Trigger: GCACACATCCATAGTTGTGCACAAGGATGAGTTCTT...AGGTTGGTCTTGGCCAGTGCTCTGTTTCCCACCAGTGTTGTTCCCTTTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp ACTGCGTACTGGCCTGGATGGTGGTTACAGAGACTGCAAATAACCTACATCATTCCCAGTCAGGAACTGTaGCACTTCGTTGCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: TAYWPGWWLQRLQITYIIPSQEL*HFVAEG
Trigger: ACCTTCAGCAACGAAGTGGCACAGTTCCTGACTGGG...AATGATGTAGGTTATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTACGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp ACTGCGTACTGGCCTGGATGGTGGTTACAGAGACTGCAAATAACCTACATCATTAGTGGCAAGAAGTTGTaGCAGAAGGGGCCCAAGGAT +
Preference number: 4 (lower is better)
Translates to: TAYWPGWWLQRLQITYIISGKKL*QKGPKD
Trigger: ATCCTTGGGCCCCTTCTGCCACAACTTCTTGCCACT...AATGATGTAGGTTATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTACGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp ACTGCGTACTGGCCTGGATGGTGGTTACAGAGACTGCAAATAACCTACATCATTAGGGAACAACACTGGTaGGAAACAGAGCACTGGCCA +
Preference number: 4 (lower is better)
Translates to: TAYWPGWWLQRLQITYIIREQHW*ETEHWP
Trigger: TGGCCAGTGCTCTGTTTCCCACCAGTGTTGTTCCCT...AATGATGTAGGTTATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTACGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CAA 72 bp TGGGACAGACAGAAATATGAGGATGGGGGTAGGCAGTaGAAGCCTGAGCCTGAGTTTACAGTTAGTGACAGT +
Preference number: 4 (lower is better)
Translates to: WDRQKYEDGGRQ*KPEPEFTVSDS
Trigger: ACTGTCACTAACTGTAAACTCAGGCTCAGGCTTCAACTGCCTACCCCCATCCTCATATTTCTGTCTGTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp TTGCCTGTTCACATCCAGGCGGAGTTAGCCGGCCACAATGAGAATGCTCCTGAGGTCCCTGCTAGTTTCTaGTCTAATCTATTATTTCCA +
Preference number: 4 (lower is better)
Translates to: LPVHIQAELAGHNENAPEVPASF*SNLLFP
Trigger: TGGAAATAATAGATTAGAGCAGAAACTAGCAGGGAC...CTCAGGAGCATTCTCATTGTGGCCGGCTAACTCCGCCTGGATGTGAACAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp ACTGCGTACTGGCCTGGATGGTGGTTACAGAGACTGCAAATAACCTACATCATTTCCCTTTCTCCAGTGTaGAGGACGCTTAGGAAACAG +
Preference number: 4 (lower is better)
Translates to: TAYWPGWWLQRLQITYIISLSPV*RTLRKQ
Trigger: CTGTTTCCTAAGCGTCCTCCACACTGGAGAAAGGGA...AATGATGTAGGTTATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTACGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp AGCAAGTCATTAGGAAAATGCCCACTCATGCCCCAACCTGCCTTTCTAAAGTCATACTGCGTACTGGCCTaGATGGTGGTTACAGAGACT +
Preference number: 4 (lower is better)
Translates to: SKSLGKCPLMPQPAFLKSYCVLA*MVVTET
Trigger: AGTCTCTGTAACCACCATCCAGGCCAGTACGCAGTA...TGACTTTAGAAAGGCAGGTTGGGGCATGAGTGGGCATTTTCCTAATGACTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp CCTATCCCTTTAAACCAATGGACCTCTAGAGGTGTCCACTGTGCAATACAAGTAGGGAATCCCATCCCTTaGTCCCCAGCTAAATACTGC +
Preference number: 4 (lower is better)
Translates to: PIPLNQWTSRGVHCAIQVGNPIP*SPAKYC
Trigger: GCAGTATTTAGCTGGGGACCAAGGGATGGGATTCCC...TACTTGTATTGCACAGTGGACACCTCTAGAGGTCCATTGGTTTAAAGGGATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp CCATCCCTTGGTCCCCAGCTAAATACTGCGTACTGGCCTGGATGGTGGTTACAGACACTGGCAAATCAGTaGGTCTTGAGAAGAATTAAA +
Preference number: 4 (lower is better)
Translates to: PSLGPQLNTAYWPGWWLQTLANQ*VLRRIK
Trigger: TTTAATTCTTCTCAAGACCCACTGATTTGCCAGTGT...CTGTAACCACCATCCAGGCCAGTACGCAGTATTTAGCTGGGGACCAAGGGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR TCA 90 bp CCTATCCCTTTAAACCAATGGACCTCTAGAGGTGTCCACTGTGCAATACAAGTAAAACAGCATCCGAAGTaGACGCACAGACAAGACAGC +
Preference number: 4 (lower is better)
Translates to: PIPLNQWTSRGVHCAIQVKQHPK*THRQDS
Trigger: GCTGTCTTGTCTGTGCGTTCACTTCGGATGCTGTTT...TACTTGTATTGCACAGTGGACACCTCTAGAGGTCCATTGGTTTAAAGGGATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR TCA 90 bp CCTATCCCTTTAAACCAATGGACCTCTAGAGGTGTCCACTGTGCAATACAAGTATTCCCAAATGTCACTTaGCATCCCAGCTGGTCATGC +
Preference number: 4 (lower is better)
Translates to: PIPLNQWTSRGVHCAIQVFPNVT*HPSWSC
Trigger: GCATGACCAGCTGGGATGTCAAGTGACATTTGGGAA...TACTTGTATTGCACAGTGGACACCTCTAGAGGTCCATTGGTTTAAAGGGATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp CCATCCCTTGGTCCCCAGCTAAATACTGCGTACTGGCCTGGATGGTGGTTACAGGATTCTAAATTTTCTTaGCACCTTGATTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: PSLGPQLNTAYWPGWWLQDSKFS*HLDSTS
Trigger: TGAAGTGGAATCAAGGTGGCAAGAAAATTTAGAATC...CTGTAACCACCATCCAGGCCAGTACGCAGTATTTAGCTGGGGACCAAGGGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp AGCCCAGACCTCATCCACTATGACAAGTCAGCTATGCTGAGGAAAGGCAGCCTCACTAGAGTAACTTTCTaGGTCACGGATGTTCTAAAA +
Preference number: 4 (lower is better)
Translates to: SPDLIHYDKSAMLRKGSLTRVTF*VTDVLK
Trigger: TTTTAGAACATCCGTGACCCAGAAAGTTACTCTAGT...GAGGCTGCCTTTCCTCAGCATAGCTGACTTGTCATAGTGGATGAGGTCTGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp AGCAAGTCATTAGGAAAATGCCCACTCATGCCCCAACCTGCCTTTCTAAAGTCAACTCATGCCCCAACCTaGCTTTCTAAAGTCAGAATG +
Preference number: 4 (lower is better)
Translates to: SKSLGKCPLMPQPAFLKSTHAPT*LSKVRM
Trigger: CATTCTGACTTTAGAAAGGCAGGTTGGGGCATGAGT...TGACTTTAGAAAGGCAGGTTGGGGCATGAGTGGGCATTTTCCTAATGACTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp ACTGCGTACTGGCCTGGATGGTGGTTACAGAGACTGCAAATAACCTACATCATTAGGTGGAAGGAGGAATaGCTTTATCCTGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: TAYWPGWWLQRLQITYIIRWKEE*LYPVFS
Trigger: GGAGAAAACAGGATAAAGCCATTCCTCCTTCCACCT...AATGATGTAGGTTATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTACGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp ACTGCGTACTGGCCTGGATGGTGGTTACAGAGACTGCAAATAACCTACATCATTGGCAATCCATCTAGGTaGAAGGAGGAATGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: TAYWPGWWLQRLQITYIIGNPSR*KEEWLY
Trigger: ATAAAGCCATTCCTCCTTCCACCTAGATGGATTGCC...AATGATGTAGGTTATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTACGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CCA 90 bp ACTGCGTACTGGCCTGGATGGTGGTTACAGAGACTGCAAATAACCTACATCATTTACTGGCCTGGATGGTaGTTACAGAGACTGCAAATA +
Preference number: 4 (lower is better)
Translates to: TAYWPGWWLQRLQITYIIYWPGW*LQRLQI
Trigger: TATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTA...AATGATGTAGGTTATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTACGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
3UTR CAA 72 bp TCCCAGAAGAAACCCAGCCTCAGAAATTCTTTCTCTTaGGGCCCAATTCTGCTAGTAGATCACGATTATACA +
Preference number: 4 (lower is better)
Translates to: SQKKPSLRNSFS*GPILLVDHDYT
Trigger: TGTATAATCGTGATCTACTAGCAGAATTGGGCCCAAAGAGAAAGAATTTCTGAGGCTGGGTTTCTTCTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR TCA 90 bp AGCAAGTCATTAGGAAAATGCCCACTCATGCCCCAACCTGCCTTTCTAAAGTCATGCAGCAGGCAGAAATaGGTTTATTGCATTAGAAAA +
Preference number: 4 (lower is better)
Translates to: SKSLGKCPLMPQPAFLKSCSRQK*VYCIRK
Trigger: TTTTCTAATGCAATAAACTCATTTCTGCCTGCTGCA...TGACTTTAGAAAGGCAGGTTGGGGCATGAGTGGGCATTTTCCTAATGACTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR GCA 90 bp AGCAAGTCATTAGGAAAATGCCCACTCATGCCCCAACCTGCCTTTCTAAAGTCAAATGGAAATAACGTGTaGCTTCAAAACACATTTAGG +
Preference number: 4 (lower is better)
Translates to: SKSLGKCPLMPQPAFLKSNGNNV*LQNTFR
Trigger: CCTAAATGTGTTTTGAAGGCACACGTTATTTCCATT...TGACTTTAGAAAGGCAGGTTGGGGCATGAGTGGGCATTTTCCTAATGACTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS CCA 90 bp GTGGCGACGGCGGCCACGACGGCCCTCGGGCACCCGGCAGCGGCTTaGACCTTCCCGTACCCGACGGGAGTGCGAAGCGGAGGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: VATAATTALGHPAAA*TFPYPTGVRSGGRG
Trigger: CCCTCTCCCTCCGCTTCGCACTCCCGTCGGGTACGGGAAGGTCCAAGCCGCTGCCGGGTGCCCGAGGGCCGTCGTGGCCGCCGTCGCCAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS CCA 90 bp GTCGTACACGTAGAGCTTCACCGGATAGAGATTCGGCGGCTCCATTaGGACCCGTGGCGACGGCGGCCACGACGGCCCTCGGGCACCCGG +
Preference number: 5 (lower is better)
Translates to: VVHVELHRIEIRRLH*DPWRRRPRRPSGTR
Trigger: CCGGGTGCCCGAGGGCCGTCGTGGCCGCCGTCGCCACGGGTCCCAATGGAGCCGCCGAATCTCTATCCGGTGAAGCTCTACGTGTACGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CAA 90 bp ACATCCCAGCTGGTCATGCCCCTGGTCAGGTCGCAGGCAAACACTAAGGCAGAAGCACCCGGCAGCGGCTaGGACCTTCCCGTACCCGAC +
Preference number: 5 (lower is better)
Translates to: TSQLVMPLVRSQANTKAEAPGSG*DLPVPD
Trigger: GTCGGGTACGGGAAGGTCCAAGCCGCTGCCGGGTGC...TTCTGCCTTAGTGTTTGCCTGCGACCTGACCAGGGGCATGACCAGCTGGGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS GCA 90 bp GCGCATCAGTGGGTGGAGAGAATGGCAGCCTTCTGTGTTAGAATCTaGCATCAGGGCAGGCCCACCTGGTTGGGAGGGCAGATGGGGGCC +
Preference number: 5 (lower is better)
Translates to: AHQWVERMAAFCVRI*HQGRPTWLGGQMGA
Trigger: GGCCCCCATCTGCCCTCCCAACCAGGTGGGCCTGCCCTGATGGCAGATTCTAACACAGAAGGCTGCCATTCTCTCCACCCACTGATGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482612.1
CDS-3UTR CAA 90 bp GCTGGAAAAGGGAACAACACTGGTGGGAAACAGAGCACTGGCCAAGACCAACCTGCTCCAGCACTGGCCTaGCTTGGGGTAAGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: AGKGNNTGGKQSTGQDQPAPALA*LGVREG
Trigger: TCCCTCCCTTACCCCAAGCAAGGCCAGTGCTGGAGC...AGGTTGGTCTTGGCCAGTGCTCTGTTTCCCACCAGTGTTGTTCCCTTTTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CAA 90 bp AGCAAGTCATTAGGAAAATGCCCACTCATGCCCCAACCTGCCTTTCTAAAGTCAGATTCGGCGGCTCCATaGGGACCCGTGGCGACGGCG +
Preference number: 5 (lower is better)
Translates to: SKSLGKCPLMPQPAFLKSDSAAP*GPVATA
Trigger: CGCCGTCGCCACGGGTCCCAATGGAGCCGCCGAATC...TGACTTTAGAAAGGCAGGTTGGGGCATGAGTGGGCATTTTCCTAATGACTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CAA 90 bp ATGGAGCTCTGGGAAAACTGCTCAGTGATCCCTCGCTCTCTCCCCACAAACCCTATTGGGAGGGAGAGCTaGCCTTCCCATGGAGCTCTG +
Preference number: 5 (lower is better)
Translates to: MELWENCSVIPRSLPTNPIGRES*PSHGAL
Trigger: CAGAGCTCCATGGGAAGGCAAGCTCTCCCTCCCAAT...AGGGTTTGTGGGGAGAGAGCGAGGGATCACTGAGCAGTTTTCCCAGAGCTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CAA 90 bp CCATCCCTTGGTCCCCAGCTAAATACTGCGTACTGGCCTGGATGGTGGTTACAGCCAGATGCCTTCCAGTaGTTTCCCCAGCATGATGGG +
Preference number: 5 (lower is better)
Translates to: PSLGPQLNTAYWPGWWLQPDAFQ*FPQHDG
Trigger: CCCATCATGCTGGGGAAACAACTGGAAGGCATCTGG...CTGTAACCACCATCCAGGCCAGTACGCAGTATTTAGCTGGGGACCAAGGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS CCA 90 bp AGAGGCTGCCTGAATGCAATCAACGACAAGAGGGAGGAGGTGAGATaGCTTTGGGGGTGTTGTGTCCTTTCGGGGTATACTGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: RGCLNAINDKREEVR*LWGCCVLSGYTAWM
Trigger: CATCCAGGCAGTATACCCCGAAAGGACACAACACCCCCAAAGCCATCTCACCTCCTCCCTCTTGTCGTTGATTGCATTCAGGCAGCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463886.1
CDS GCA 90 bp GGGCAGCTGGAGATACCACCACTGCCGAAGAAGAACTCATCCTTGTaGACAACTATGGATGTGTGCCAGATGCCTTCCAGTTGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: GQLEIPPLPKKNSSL*TTMDVCQMPSSCFP
Trigger: GGGGAAACAACTGGAAGGCATCTGGCACACATCCATAGTTGTGCACAAGGATGAGTTCTTCTTCGGCAGTGGTGGTATCTCCAGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS CCA 90 bp GGTCTAGCTCTGAAGGTGGAGGTAATACAGGTGCGCATCAGTGGGTaGAGAGAATGGCAGCCTTCTGTGTTAGAATCTGCCATCAGGGCA +
Preference number: 5 (lower is better)
Translates to: GLALKVEVIQVRISG*REWQPSVLESAIRA
Trigger: TGCCCTGATGGCAGATTCTAACACAGAAGGCTGCCATTCTCTCCACCCACTGATGCGCACCTGTATTACCTCCACCTTCAGAGCTAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482612.1
CDS-3UTR CAA 90 bp TTTGGAGAGGAAAGGCCTGTGCTGCAGGCCAGACTTCCAGGAAGAAGCAACATAGGAAAGAGTTCTAGGTaGGGGCTCCCGCAAACTGTG +
Preference number: 5 (lower is better)
Translates to: FGEERPVLQARLPGRSNIGKSSR*GLPQTV
Trigger: CACAGTTTGCGGGAGCCCCAACCTAGAACTCTTTCC...TATGTTGCTTCTTCCTGGAAGTCTGGCCTGCAGCACAGGCCTTTCCTCTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CAA 90 bp AGCAAGTCATTAGGAAAATGCCCACTCATGCCCCAACCTGCCTTTCTAAAGTCAACAGTGGGGCTCCCATaGGGAGGGAGAGCTTGCCTT +
Preference number: 5 (lower is better)
Translates to: SKSLGKCPLMPQPAFLKSTVGLP*GGRACL
Trigger: AAGGCAAGCTCTCCCTCCCAATGGGAGCCCCACTGT...TGACTTTAGAAAGGCAGGTTGGGGCATGAGTGGGCATTTTCCTAATGACTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CAA 90 bp ACATCCCAGCTGGTCATGCCCCTGGTCAGGTCGCAGGCAAACACTAAGGCAGAAAAGAAGAACTCATCCTaGTGCACAACTATGGATGTG +
Preference number: 5 (lower is better)
Translates to: TSQLVMPLVRSQANTKAEKKNSS*CTTMDV
Trigger: CACATCCATAGTTGTGCACAAGGATGAGTTCTTCTT...TTCTGCCTTAGTGTTTGCCTGCGACCTGACCAGGGGCATGACCAGCTGGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CAA 90 bp TTGCCTGTTCACATCCAGGCGGAGTTAGCCGGCCACAATGAGAATGCTCCTGAGAACTGTGCCACTTCGTaGCTGAAGGTGTTACAATTG +
Preference number: 5 (lower is better)
Translates to: LPVHIQAELAGHNENAPENCATS*LKVLQL
Trigger: CAATTGTAACACCTTCAGCAACGAAGTGGCACAGTT...CTCAGGAGCATTCTCATTGTGGCCGGCTAACTCCGCCTGGATGTGAACAGGCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CAA 90 bp TTTGGAGAGGAAAGGCCTGTGCTGCAGGCCAGACTTCCAGGAAGAAGCAACATATGTTTCTTAGCAGCATaGTCTACATGCGGCCTGACG +
Preference number: 5 (lower is better)
Translates to: FGEERPVLQARLPGRSNICFLAA*STCGLT
Trigger: CGTCAGGCCGCATGTAGACAATGCTGCTAAGAAACA...TATGTTGCTTCTTCCTGGAAGTCTGGCCTGCAGCACAGGCCTTTCCTCTCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CAA 90 bp AGCAAGTCATTAGGAAAATGCCCACTCATGCCCCAACCTGCCTTTCTAAAGTCATGGGTCCCACAGGTGTaGGCAACTTGGGTAGAGCGT +
Preference number: 5 (lower is better)
Translates to: SKSLGKCPLMPQPAFLKSWVPQV*ATWVER
Trigger: ACGCTCTACCCAAGTTGCCAACACCTGTGGGACCCA...TGACTTTAGAAAGGCAGGTTGGGGCATGAGTGGGCATTTTCCTAATGACTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CAA 90 bp ACTGCGTACTGGCCTGGATGGTGGTTACAGAGACTGCAAATAACCTACATCATTGATGGGGGTAGGCAGTaGAAGCCTGAGCCTGAGTTT +
Preference number: 5 (lower is better)
Translates to: TAYWPGWWLQRLQITYIIDGGRQ*KPEPEF
Trigger: AAACTCAGGCTCAGGCTTCAACTGCCTACCCCCATC...AATGATGTAGGTTATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTACGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS TCA 90 bp AAGAAGGAATCTTCCGCCCAGTCAGGAACTGTGCCACTTCGTTGCTaGAGGTGTTACAATTGTGTTCAAAGAGGTTGTAGGCCTCACCTC +
Preference number: 5 (lower is better)
Translates to: KKESSAQSGTVPLRC*RCYNCVQRGCRPHL
Trigger: GAGGTGAGGCCTACAACCTCTTTGAACACAATTGTAACACCTTCAGCAACGAAGTGGCACAGTTCCTGACTGGGCGGAAGATTCCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263256.7
ENST00000463886.1
ENST00000482612.1
CDS-3UTR CAA 90 bp CCTATCCCTTTAAACCAATGGACCTCTAGAGGTGTCCACTGTGCAATACAAGTACTTGCTGTTACTCCCTaGATCCGGAGGCAATGGCTG +
Preference number: 5 (lower is better)
Translates to: PIPLNQWTSRGVHCAIQVLAVTP*IRRQWL
Trigger: CAGCCATTGCCTCCGGATCAAGGGAGTAACAGCAAG...TACTTGTATTGCACAGTGGACACCTCTAGAGGTCCATTGGTTTAAAGGGATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS GCA 90 bp CAGGTCTGTGATGTAAGAAGGAATCTTCCGCCCAGTCAGGAACTGTaGCACTTCGTTGCTGAAGGTGTTACAATTGTGTTCAAAGAGGTT +
Preference number: 5 (lower is better)
Translates to: QVCDVRRNLPPSQEL*HFVAEGVTIVFKEV
Trigger: AACCTCTTTGAACACAATTGTAACACCTTCAGCAACGAAGTGGCACAGTTCCTGACTGGGCGGAAGATTCCTTCTTACATCACAGACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263256.7
ENST00000463886.1
ENST00000482612.1
CDS-3UTR CAA 90 bp AGCCCAGACCTCATCCACTATGACAAGTCAGCTATGCTGAGGAAAGGCAGCCTCTGTACACCAAATCCTTaGGTTCATTTAACACTAGAG +
Preference number: 5 (lower is better)
Translates to: SPDLIHYDKSAMLRKGSLCTPNP*VHLTLE
Trigger: CTCTAGTGTTAAATGAACCAAAGGATTTGGTGTACA...GAGGCTGCCTTTCCTCAGCATAGCTGACTTGTCATAGTGGATGAGGTCTGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CAA 90 bp AGCCCAGACCTCATCCACTATGACAAGTCAGCTATGCTGAGGAAAGGCAGCCTCGCAAATCAGTGGGTCTaGAGAAGAATTAAACTTTCA +
Preference number: 5 (lower is better)
Translates to: SPDLIHYDKSAMLRKGSLANQWV*RRIKLS
Trigger: TGAAAGTTTAATTCTTCTCAAGACCCACTGATTTGC...GAGGCTGCCTTTCCTCAGCATAGCTGACTTGTCATAGTGGATGAGGTCTGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CAA 90 bp CCTATCCCTTTAAACCAATGGACCTCTAGAGGTGTCCACTGTGCAATACAAGTAAGAAGGGGTGGCATTTaGTTCTGTTTCTTAGCAGCA +
Preference number: 5 (lower is better)
Translates to: PIPLNQWTSRGVHCAIQVRRGGI*FCFLAA
Trigger: TGCTGCTAAGAAACAGAACAAAATGCCACCCCTTCT...TACTTGTATTGCACAGTGGACACCTCTAGAGGTCCATTGGTTTAAAGGGATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS-3UTR CAA 90 bp CCTATCCCTTTAAACCAATGGACCTCTAGAGGTGTCCACTGTGCAATACAAGTAATTGATGGCAGAAGATaGGCAATCCATCTAGGTGGA +
Preference number: 5 (lower is better)
Translates to: PIPLNQWTSRGVHCAIQVIDGRR*AIHLGG
Trigger: TCCACCTAGATGGATTGCCAATCTTCTGCCATCAAT...TACTTGTATTGCACAGTGGACACCTCTAGAGGTCCATTGGTTTAAAGGGATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS CAA 90 bp CGTGGCGACGGCGGCCACGACGGCCCTCGGGCACCCGGCAGCGGCTaGGACCTTCCCGTACCCGACGGGAGTGCGAAGCGGAGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: RGDGGHDGPRAPGSG*DLPVPDGSAKRRER
Trigger: CCTCTCCCTCCGCTTCGCACTCCCGTCGGGTACGGGAAGGTCCAAGCCGCTGCCGGGTGCCCGAGGGCCGTCGTGGCCGCCGTCGCCACG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS CAA 72 bp GGCGGCCACGACGGCCCTCGGGCACCCGGCAGCGGCTaGGACCTTCCCGTACCCGACGGGAGTGCGAAGCGG +
Preference number: 6 (lower is better)
Translates to: GGHDGPRAPGSG*DLPVPDGSAKR
Trigger: CCGCTTCGCACTCCCGTCGGGTACGGGAAGGTCCAAGCCGCTGCCGGGTGCCCGAGGGCCGTCGTGGCCGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS CCA 72 bp GCGGCCACGACGGCCCTCGGGCACCCGGCAGCGGCTTaGACCTTCCCGTACCCGACGGGAGTGCGAAGCGGA +
Preference number: 6 (lower is better)
Translates to: AATTALGHPAAA*TFPYPTGVRSG
Trigger: TCCGCTTCGCACTCCCGTCGGGTACGGGAAGGTCCAAGCCGCTGCCGGGTGCCCGAGGGCCGTCGTGGCCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS CCA 72 bp CACCGGATAGAGATTCGGCGGCTCCATTGGGACCCGTaGCGACGGCGGCCACGACGGCCCTCGGGCACCCGG +
Preference number: 6 (lower is better)
Translates to: HRIEIRRLHWDP*RRRPRRPSGTR
Trigger: CCGGGTGCCCGAGGGCCGTCGTGGCCGCCGTCGCCACGGGTCCCAATGGAGCCGCCGAATCTCTATCCGGTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS CAA 90 bp GGTCGTACACGTAGAGCTTCACCGGATAGAGATTCGGCGGCTCCATaGGGACCCGTGGCGACGGCGGCCACGACGGCCCTCGGGCACCCG +
Preference number: 6 (lower is better)
Translates to: GRTRRASPDRDSAAP*GPVATAATTALGHP
Trigger: CGGGTGCCCGAGGGCCGTCGTGGCCGCCGTCGCCACGGGTCCCAATGGAGCCGCCGAATCTCTATCCGGTGAAGCTCTACGTGTACGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS CCA 72 bp GTAGAGCTTCACCGGATAGAGATTCGGCGGCTCCATTaGGACCCGTGGCGACGGCGGCCACGACGGCCCTCG +
Preference number: 6 (lower is better)
Translates to: VELHRIEIRRLH*DPWRRRPRRPS
Trigger: CGAGGGCCGTCGTGGCCGCCGTCGCCACGGGTCCCAATGGAGCCGCCGAATCTCTATCCGGTGAAGCTCTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS CAA 72 bp CGTAGAGCTTCACCGGATAGAGATTCGGCGGCTCCATaGGGACCCGTGGCGACGGCGGCCACGACGGCCCTC +
Preference number: 6 (lower is better)
Translates to: RRASPDRDSAAP*GPVATAATTAL
Trigger: GAGGGCCGTCGTGGCCGCCGTCGCCACGGGTCCCAATGGAGCCGCCGAATCTCTATCCGGTGAAGCTCTACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS CCA 72 bp TGCCCACGGAGCTCCCTCCTGGAGGCTGGATCTGAATaGAGTCCAGGAGGGGCCGAAGTGCCTGTCCAAAGG +
Preference number: 6 (lower is better)
Translates to: CPRSSLLEAGSE*SPGGAEVPVQR
Trigger: CCTTTGGACAGGCACTTCGGCCCCTCCTGGACTCCATTCAGATCCAGCCTCCAGGAGGGAGCTCCGTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263256.7
ENST00000468151.1
CDS GCA 72 bp AGGCTGGATCTGAATGGAGTCCAGGAGGGGCCGAAGTaGCTGTCCAAAGGGCCAGCCTGCCACAGCAGTCTT +
Preference number: 6 (lower is better)
Translates to: RLDLNGVQEGPK*LSKGPACHSSL
Trigger: AAGACTGCTGTGGCAGGCTGGCCCTTTGGACAGGCACTTCGGCCCCTCCTGGACTCCATTCAGATCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468151.1
CDS GCA 72 bp AGGCTGGATCTGAATGGAGTCCAGGAGGGGCCGAAGTaGCTGTCCAAAGGGCGTGGAGAGAACTTCAGAGGG +
Preference number: 6 (lower is better)
Translates to: RLDLNGVQEGPK*LSKGRGENFRG
Trigger: CCCTCTGAAGTTCTCTCCACGCCCTTTGGACAGGCACTTCGGCCCCTCCTGGACTCCATTCAGATCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS GCA 72 bp TGGGTGGAGAGAATGGCAGCCTTCTGTGTTAGAATCTaGCATCAGGGCAGGCCCACCTGGTTGGGAGGGCAG +
Preference number: 6 (lower is better)
Translates to: WVERMAAFCVRI*HQGRPTWLGGQ
Trigger: CTGCCCTCCCAACCAGGTGGGCCTGCCCTGATGGCAGATTCTAACACAGAAGGCTGCCATTCTCTCCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482612.1
CDS CAA 72 bp GTGCACAACTATGGATGTGTGCCAGATGCCTTCCAGTaGTTTCCCCAGCATGATGGGGCTGAGCCGCCGGGC +
Preference number: 6 (lower is better)
Translates to: VHNYGCVPDAFQ*FPQHDGAEPPG
Trigger: GCCCGGCGGCTCAGCCCCATCATGCTGGGGAAACAACTGGAAGGCATCTGGCACACATCCATAGTTGTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS CAA 72 bp CGGACTGGGGCTCCTCACCAGCCTGCCACAGCAGTCTaGTTTCCTATGCAAGCTCTTCCTGGGAGGTGCTTC +
Preference number: 6 (lower is better)
Translates to: RTGAPHQPATAV*FPMQALPGRCF
Trigger: GAAGCACCTCCCAGGAAGAGCTTGCATAGGAAACAAGACTGCTGTGGCAGGCTGGTGAGGAGCCCCAGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463886.1
CDS CAA 90 bp CAGGGCTGGCGGACTGGGGCTCCTCACCAGCCTGCCACAGCAGTCTaGTTTCCTATGCAAGCTCTTCCTGGGAGGTGCTTCCTCAGATAT +
Preference number: 6 (lower is better)
Translates to: QGWRTGAPHQPATAV*FPMQALPGRCFLRY
Trigger: ATATCTGAGGAAGCACCTCCCAGGAAGAGCTTGCATAGGAAACAAGACTGCTGTGGCAGGCTGGTGAGGAGCCCCAGTCCGCCAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463886.1
CDS GCA 72 bp TGTGTCCTTTCGGGGTATACTGCCTGGATGATGGCCTaGAAGGCTCTTCCAAGGCTTGGGGCACATCAGGAC +
Preference number: 6 (lower is better)
Translates to: CVLSGYTAWMMA*KALPRLGAHQD
Trigger: GTCCTGATGTGCCCCAAGCCTTGGAAGAGCCTTGCAGGCCATCATCCAGGCAGTATACCCCGAAAGGACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463886.1
CDS CCA 72 bp CTTTGGGGGTGTTGTGTCCTTTCGGGGTATACTGCCTaGATGATGGCCTGCAAGGCTCTTCCAAGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: LWGCCVLSGYTA*MMACKALPRLG
Trigger: CCCAAGCCTTGGAAGAGCCTTGCAGGCCATCATCCAGGCAGTATACCCCGAAAGGACACAACACCCCCAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463886.1
CDS CAA 72 bp AGTGCCTGTCCAAAGGGCCAGCCTGCCACAGCAGTCTaGTTTCCTATGCAAGCTCTTCCTGGGAGGTGCTTC +
Preference number: 6 (lower is better)
Translates to: SACPKGQPATAV*FPMQALPGRCF
Trigger: GAAGCACCTCCCAGGAAGAGCTTGCATAGGAAACAAGACTGCTGTGGCAGGCTGGCCCTTTGGACAGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468151.1
CDS CAA 90 bp TGCAATCAACGACAAGAGGGAGGAGGTGAGATGGCTTTGGGGGTGTaGTGTCCTTTCGGGGTATACTGCCTGGATGATGGCCTGCAAGGC +
Preference number: 6 (lower is better)
Translates to: CNQRQEGGGEMALGV*CPFGVYCLDDGLQG
Trigger: GCCTTGCAGGCCATCATCCAGGCAGTATACCCCGAAAGGACACAACACCCCCAAAGCCATCTCACCTCCTCCCTCTTGTCGTTGATTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463886.1
CDS GCA 72 bp ATGGCTTTGGGGGTGTTGTGTCCTTTCGGGGTATACTaGCTGGATGATGGCCTGCAAGGCTCTTCCAAGGCT +
Preference number: 6 (lower is better)
Translates to: MALGVLCPFGVY*LDDGLQGSSKA
Trigger: AGCCTTGGAAGAGCCTTGCAGGCCATCATCCAGGCAGTATACCCCGAAAGGACACAACACCCCCAAAGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463886.1
CDS CCA 72 bp GCAATCAACGACAAGAGGGAGGAGGTGAGATGGCTTTaGGGGTGTTGTGTCCTTTCGGGGTATACTGCCTGG +
Preference number: 6 (lower is better)
Translates to: AINDKREEVRWL*GCCVLSGYTAW
Trigger: CCAGGCAGTATACCCCGAAAGGACACAACACCCCCAAAGCCATCTCACCTCCTCCCTCTTGTCGTTGATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463886.1
CDS CAA 90 bp CTGCCTGAATGCAATCAACGACAAGAGGGAGGAGGTGAGATGGCTTaGGGGGTGTTGTGTCCTTTCGGGGTATACTGCCTGGATGATGGC +
Preference number: 6 (lower is better)
Translates to: LPECNQRQEGGGEMA*GVLCPFGVYCLDDG
Trigger: GCCATCATCCAGGCAGTATACCCCGAAAGGACACAACACCCCCAAAGCCATCTCACCTCCTCCCTCTTGTCGTTGATTGCATTCAGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463886.1
CDS CCA 72 bp CTAAGTTCTGTGGTTGCACTTAGGCCAGGGCAGAGCTaGTCTAGCTCTGAAGGTGGAGGTAATACAGGTGCG +
Preference number: 6 (lower is better)
Translates to: LSSVVALRPGQS*SSSEGGGNTGA
Trigger: CGCACCTGTATTACCTCCACCTTCAGAGCTAGACCAGCTCTGCCCTGGCCTAAGTGCAACCACAGAACTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482612.1
CDS CAA 72 bp TGCAATCAACGACAAGAGGGAGGAGGTGAGATGGCTTaGGGGGTGTTGTGTCCTTTCGGGGTATACTGCCTG +
Preference number: 6 (lower is better)
Translates to: CNQRQEGGGEMA*GVLCPFGVYCL
Trigger: CAGGCAGTATACCCCGAAAGGACACAACACCCCCAAAGCCATCTCACCTCCTCCCTCTTGTCGTTGATTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463886.1
CDS CCA 72 bp TGTGACTTCTGTACTCCCCACATCAACCACAGAGTCTaGAGGCCCAAGCAATGTCCCTCCCTAAAAGAGCCA +
Preference number: 6 (lower is better)
Translates to: CDFCTPHINHRV*RPKQCPSLKEP
Trigger: TGGCTCTTTTAGGGAGGGACATTGCTTGGGCCTCCAGACTCTGTGGTTGATGTGGGGAGTACAGAAGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463886.1
CDS CCA 72 bp GAGGTAATACAGGTGCGCATCAGTGGGTGGAGAGAATaGCAGCCTTCTGTGTTAGAATCTGCCATCAGGGCA +
Preference number: 6 (lower is better)
Translates to: EVIQVRISGWRE*QPSVLESAIRA
Trigger: TGCCCTGATGGCAGATTCTAACACAGAAGGCTGCCATTCTCTCCACCCACTGATGCGCACCTGTATTACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482612.1
CDS CCA 72 bp CTGAAGGTGGAGGTAATACAGGTGCGCATCAGTGGGTaGAGAGAATGGCAGCCTTCTGTGTTAGAATCTGCC +
Preference number: 6 (lower is better)
Translates to: LKVEVIQVRISG*REWQPSVLESA
Trigger: GGCAGATTCTAACACAGAAGGCTGCCATTCTCTCCACCCACTGATGCGCACCTGTATTACCTCCACCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482612.1
CDS CCA 72 bp CTGAATGCAATCAACGACAAGAGGGAGGAGGTGAGATaGCTTTGGGGGTGTTGTGTCCTTTCGGGGTATACT +
Preference number: 6 (lower is better)
Translates to: LNAINDKREEVR*LWGCCVLSGYT
Trigger: AGTATACCCCGAAAGGACACAACACCCCCAAAGCCATCTCACCTCCTCCCTCTTGTCGTTGATTGCATTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463886.1
CDS CCA 72 bp AGCTCTGAAGGTGGAGGTAATACAGGTGCGCATCAGTaGGTGGAGAGAATGGCAGCCTTCTGTGTTAGAATC +
Preference number: 6 (lower is better)
Translates to: SSEGGGNTGAHQ*VERMAAFCVRI
Trigger: GATTCTAACACAGAAGGCTGCCATTCTCTCCACCCACTGATGCGCACCTGTATTACCTCCACCTTCAGAGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482612.1
CDS CAA 72 bp CTGGAGATACCACCACTGCCGAAGAAGAACTCATCCTaGTGCACAACTATGGATGTGTGCCAGATGCCTTCC +
Preference number: 6 (lower is better)
Translates to: LEIPPLPKKNSS*CTTMDVCQMPS
Trigger: GGAAGGCATCTGGCACACATCCATAGTTGTGCACAAGGATGAGTTCTTCTTCGGCAGTGGTGGTATCTCCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS GCA 72 bp GAGATACCACCACTGCCGAAGAAGAACTCATCCTTGTaGACAACTATGGATGTGTGCCAGATGCCTTCCAGT +
Preference number: 6 (lower is better)
Translates to: EIPPLPKKNSSL*TTMDVCQMPSS
Trigger: ACTGGAAGGCATCTGGCACACATCCATAGTTGTGCACAAGGATGAGTTCTTCTTCGGCAGTGGTGGTATCTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS CCA 72 bp CACTGCCGAAGAAGAACTCATCCTTGTGCACAACTATaGATGTGTGCCAGATGCCTTCCAGTTGTTTCCCCA +
Preference number: 6 (lower is better)
Translates to: HCRRRTHPCAQL*MCARCLPVVSP
Trigger: TGGGGAAACAACTGGAAGGCATCTGGCACACATCCATAGTTGTGCACAAGGATGAGTTCTTCTTCGGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263256.7
CDS TCA 72 bp TCTTCCGCCCAGTCAGGAACTGTGCCACTTCGTTGCTaGAGGTGTTACAATTGTGTTCAAAGAGGTTGTAGG +
Preference number: 6 (lower is better)
Translates to: SSAQSGTVPLRC*RCYNCVQRGCR
Trigger: CCTACAACCTCTTTGAACACAATTGTAACACCTTCAGCAACGAAGTGGCACAGTTCCTGACTGGGCGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263256.7
ENST00000463886.1
ENST00000482612.1
CDS GCA 72 bp GATGTAAGAAGGAATCTTCCGCCCAGTCAGGAACTGTaGCACTTCGTTGCTGAAGGTGTTACAATTGTGTTC +
Preference number: 6 (lower is better)
Translates to: DVRRNLPPSQEL*HFVAEGVTIVF
Trigger: GAACACAATTGTAACACCTTCAGCAACGAAGTGGCACAGTTCCTGACTGGGCGGAAGATTCCTTCTTACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263256.7
ENST00000463886.1
ENST00000482612.1