RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DERL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000099958

Ensembl transcript IDs: ENST00000290730.11, ENST00000318109.12, ENST00000404056.1, ENST00000406855.7, ENST00000464023.1, ENST00000464110.1, ENST00000476077.1, ENST00000488272.5, ENST00000614504.3, ENST00000620697.3, ENST00000625630.2, ENST00000626238.1, ENST00000626854.2, ENST00000627316.1, ENST00000628868.1, ENST00000631305.2

Found 704 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCAGGAAGGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTaGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCC +
Preference number: 1 (lower is better)
Translates to: PQEGAASSPAVPGPP*LCCVQMVRLLPAGA
Trigger: GGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACCTTCCTGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR GCA 90 bp TCCCTGGGCCGCCCTGGCTCTGCTGTGTCCAGATGGTCAGGCTACTaGCAGCTGGGGCCTTGCTGCTCTGAAGTCCCCTGCGGAGGGCCC +
Preference number: 1 (lower is better)
Translates to: SLGRPGSAVSRWSGY*QLGPCCSEVPCGGP
Trigger: GGGCCCTCCGCAGGGGACTTCAGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCCAGGGCGGCCCAGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR GCA 90 bp GAAGGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTaGTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTG +
Preference number: 1 (lower is better)
Translates to: EGAASSPAVPGPPWL*CVQMVRLLPAGALL
Trigger: CAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR CCA 90 bp GGGCCTTGCTGCTCTGAAGTCCCCTGCGGAGGGCCCAGTCCTGTGTaGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGAGGGCTGTT +
Preference number: 1 (lower is better)
Translates to: GPCCSEVPCGGPSPV*ALLGCRQPGCRRAV
Trigger: AACAGCCCTCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGGGCCCTCCGCAGGGGACTTCAGAGCAGCAAGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR CCA 90 bp CGGAGGGCCCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTaGGTGCAGGAGGGCTGTTCTAGCTCCAGTGGCACCCATAGCCAG +
Preference number: 1 (lower is better)
Translates to: RRAQSCVGTAGLSPA*VQEGCSSSSGTHSQ
Trigger: CTGGCTATGGGTGCCACTGGAGCTAGAACAGCCCTCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGGGCCCTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR CCA 90 bp GCCGCCCTGGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTaGGGCCTTGCTGCTCTGAAGTCCCCTGCGGAGGGCCCAGTCCTG +
Preference number: 1 (lower is better)
Translates to: AALALLCPDGQATAS*GLAALKSPAEGPVL
Trigger: CAGGACTGGGCCCTCCGCAGGGGACTTCAGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCCAGGGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR GCA 90 bp GGGCCCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTaGAGGAGGGCTGTTCTAGCTCCAGTGGCACCCATAGCCAGGTCA +
Preference number: 1 (lower is better)
Translates to: GPSPVWALLGCRQPG*RRAVLAPVAPIARS
Trigger: TGACCTGGCTATGGGTGCCACTGGAGCTAGAACAGCCCTCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR GCA 90 bp CCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGCTaGCAGGGCAGGGCTAGGGTCAGAGGCTGCTGTGCTCCCTGGAAG +
Preference number: 1 (lower is better)
Translates to: PAQTAATLSCWQVPC*QGRARVRGCCAPWK
Trigger: CTTCCAGGGAGCACAGCAGCCTCTGACCCTAGCCCTGCCCTGGCAGCATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR TCA 90 bp CGCCTGTCCTGGCCCCAGCAGCCGAAATCTGGTGAACTTCCCCGCTaGCTGGCAGGTAGCAGAGGCCTATGGTGGGCAGGACTTGCCCAA +
Preference number: 1 (lower is better)
Translates to: RLSWPQQPKSGELPR*LAGSRGLWWAGLAQ
Trigger: TTGGGCAAGTCCTGCCCACCATAGGCCTCTGCTACCTGCCAGTCAGCGGGGAAGTTCACCAGATTTCGGCTGCTGGGGCCAGGACAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR TCA 90 bp ACCCCTATCCTACCACCTGCAGTTGGGCTGAGAGGCCACACTGAGTaGGGACGGGGCAGGCATAGAAGGATGTGGCCAGGTGAGATGGGG +
Preference number: 1 (lower is better)
Translates to: TPILPPAVGLRGHTE*GRGRHRRMWPGEMG
Trigger: CCCCATCTCACCTGGCCACATCCTTCTATGCCTGCCCCGTCCTCACTCAGTGTGGCCTCTCAGCCCAACTGCAGGTGGTAGGATAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR TCA 90 bp CTTTGCCCTCTGTGGGCACCCCTATCCTACCACCTGCAGTTGGGCTaGGAGGCCACACTGAGTGAGGACGGGGCAGGCATAGAAGGATGT +
Preference number: 1 (lower is better)
Translates to: LCPLWAPLSYHLQLG*EATLSEDGAGIEGC
Trigger: ACATCCTTCTATGCCTGCCCCGTCCTCACTCAGTGTGGCCTCTCAGCCCAACTGCAGGTGGTAGGATAGGGGTGCCCACAGAGGGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR GCA 90 bp TACAAGCCAGCTGTGAGGAATATGGGAATAGCCCTCCCGGCCTGGTaGCAGCTCTTGGAGTTGACACGGTACAGGGAGGAGACACAGCCC +
Preference number: 1 (lower is better)
Translates to: YKPAVRNMGIALPAW*QLLELTRYREETQP
Trigger: GGGCTGTGTCTCCTCCCTGTACCGTGTCAACTCCAAGAGCTGGCACCAGGCCGGGAGGGCTATTCCCATATTCCTCACAGCTGGCTTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR GCA 90 bp TGTGAGCTCAAAAGCTCTGCCTGGCAACCTGTGAGCTCAAAGCTCTaGCAGGCAACCATGGGCAGTTTCTTTGCCCTCTGTGGGCACCCC +
Preference number: 1 (lower is better)
Translates to: CELKSSAWQPVSSKL*QATMGSFFALCGHP
Trigger: GGGGTGCCCACAGAGGGCAAAGAAACTGCCCATGGTTGCCTGGCAGAGCTTTGAGCTCACAGGTTGCCAGGCAGAGCTTTTGAGCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR GCA 90 bp ATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTaGCCTCCATCAAAGAGTGGAACTCCCCAGAGCCCCATGCACAGC +
Preference number: 1 (lower is better)
Translates to: MLAWDSSQGVCTQGL*PPSKSGTPQSPMHS
Trigger: GCTGTGCATGGGGCTCTGGGGAGTTCCACTCTTTGATGGAGGGCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR CCA 90 bp CCTTACAAGCCAGCTGTGAGGAATATGGGAATAGCCCTCCCGGCCTaGTGCCAGCTCTTGGAGTTGACACGGTACAGGGAGGAGACACAG +
Preference number: 1 (lower is better)
Translates to: PYKPAVRNMGIALPA*CQLLELTRYREETQ
Trigger: CTGTGTCTCCTCCCTGTACCGTGTCAACTCCAAGAGCTGGCACCAGGCCGGGAGGGCTATTCCCATATTCCTCACAGCTGGCTTGTAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR TCA 90 bp CTGAGCCTGTCACCTGTGAGCTCAAAAGCTCTGCCTGGCAACCTGTaGGCTCAAAGCTCTGCCAGGCAACCATGGGCAGTTTCTTTGCCC +
Preference number: 1 (lower is better)
Translates to: LSLSPVSSKALPGNL*AQSSARQPWAVSLP
Trigger: GGGCAAAGAAACTGCCCATGGTTGCCTGGCAGAGCTTTGAGCTCACAGGTTGCCAGGCAGAGCTTTTGAGCTCACAGGTGACAGGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR CCA 90 bp GATGAGAACCCTGAGCCTGTCACCTGTGAGCTCAAAAGCTCTGCCTaGCAACCTGTGAGCTCAAAGCTCTGCCAGGCAACCATGGGCAGT +
Preference number: 1 (lower is better)
Translates to: DENPEPVTCELKSSA*QPVSSKLCQATMGS
Trigger: ACTGCCCATGGTTGCCTGGCAGAGCTTTGAGCTCACAGGTTGCCAGGCAGAGCTTTTGAGCTCACAGGTGACAGGCTCAGGGTTCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR CCA 90 bp CCTGACCGCCAGCTCACACCGCCGCAAAGCCATCTCCACAAGGTCTaGCTACAACACGGAGGGCAGACTCAACAGAGAACAGTGTTGTTA +
Preference number: 1 (lower is better)
Translates to: PDRQLTPPQSHLHKV*LQHGGQTQQRTVLL
Trigger: TAACAACACTGTTCTCTGTTGAGTCTGCCCTCCGTGTTGTAGCCAGACCTTGTGGAGATGGCTTTGCGGCGGTGTGAGCTGGCGGTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR CCA 90 bp AGGCATAGAAGGATGTGGCCAGGTGAGATGGGGAAGCCAGTGCTGTaGGCCAAGAGACTGCAGCTCATTCTGTTTATTCAGGTGGGCCCT +
Preference number: 1 (lower is better)
Translates to: RHRRMWPGEMGKPVL*AKRLQLILFIQVGP
Trigger: AGGGCCCACCTGAATAAACAGAATGAGCTGCAGTCTCTTGGCCCACAGCACTGGCTTCCCCATCTCACCTGGCCACATCCTTCTATGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR CCA 90 bp TCCCCATTCTTCAGAATGGACACAGGATCTGGGAGGGCAGCAAACTaGCTCGCAGCTCCAGCCTTACTGAAGAGAATGGGCACAGATCCG +
Preference number: 1 (lower is better)
Translates to: SPFFRMDTGSGRAAN*LAAPALLKRMGTDP
Trigger: CGGATCTGTGCCCATTCTCTTCAGTAAGGCTGGAGCTGCGAGCCAGTTTGCTGCCCTCCCAGATCCTGTGTCCATTCTGAAGAATGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR TCA 90 bp CTTAGACATGAACAGGTTTCATTGCTGAGGTGTTTGTTCTGTCCATaGGGTAGGAACCTCGGCAATGAAAGGGTGAGGCAGCCCTGTGTC +
Preference number: 1 (lower is better)
Translates to: LRHEQVSLLRCLFCP*GRNLGNERVRQPCV
Trigger: GACACAGGGCTGCCTCACCCTTTCATTGCCGAGGTTCCTACCTCATGGACAGAACAAACACCTCAGCAATGAAACCTGTTCATGTCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR TCA 90 bp AGATTCCCAGCCCAGCTGCTCTTAGACATGAACAGGTTTCATTGCTaGGGTGTTTGTTCTGTCCATGAGGTAGGAACCTCGGCAATGAAA +
Preference number: 1 (lower is better)
Translates to: RFPAQLLLDMNRFHC*GVCSVHEVGTSAMK
Trigger: TTTCATTGCCGAGGTTCCTACCTCATGGACAGAACAAACACCTCAGCAATGAAACCTGTTCATGTCTAAGAGCAGCTGGGCTGGGAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GAGGGCCCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGAGCAGGGCCACCTGGCTaGGAGGTGCCGGGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: EGPVLCGHCWAVASLGAGAGPPG*EVPGRL
Trigger: CAGCCTTCCCGGCACCTCCCAGCCAGGTGGCCCTGC...TCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGGGCCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGCTGTGTCCAGCATAGCCAGGTCAGCTaGGGCCCTTTCCCACCCCAG +
Preference number: 2 (lower is better)
Translates to: GAASSPAVPGPPWLCCVQHSQVS*GPFPPQ
Trigger: CTGGGGTGGGAAAGGGCCCCAGCTGACCTGGCTATG...CTGGACACAGCAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGCTGTGTCCAGTGGCAGATGGGGTCCTaGCTGTTCCTCAGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: GAASSPAVPGPPWLCCVQWQMGS*LFLREG
Trigger: CCCCTCCCTGAGGAACAGCCAGGACCCCATCTGCCA...CTGGACACAGCAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp GGAGGTGCCGGGAAGGCTGGGCCCTCACTCCTGACCGCCAGCTCACACCGCCGCCACCTGCAGTTGGGCTaGGAGGCCACACTGAGTGAG +
Preference number: 2 (lower is better)
Translates to: GGAGKAGPSLLTASSHRRHLQLG*EATLSE
Trigger: CTCACTCAGTGTGGCCTCTCAGCCCAACTGCAGGTG...GCGGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAGCCTTCCCGGCACCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp GGAGGTGCCGGGAAGGCTGGGCCCTCACTCCTGACCGCCAGCTCACACCGCCGCGCAGCCGAAATCTGGTaGACTTCCCCGCTGACTGGC +
Preference number: 2 (lower is better)
Translates to: GGAGKAGPSLLTASSHRRAAEIW*TSPLTG
Trigger: GCCAGTCAGCGGGGAAGTTCACCAGATTTCGGCTGC...GCGGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAGCCTTCCCGGCACCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGCTGTGTCCAGAGGAGACGCCTGTCCTaGCCCCAGCAGCCGAAATCT +
Preference number: 2 (lower is better)
Translates to: GAASSPAVPGPPWLCCVQRRRLS*PQQPKS
Trigger: AGATTTCGGCTGCTGGGGCCAGGACAGGCGTCTCCT...CTGGACACAGCAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GCCTCAGGAAGGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGAGGAGACGCCTGTCCTaGCCCCAGCAGCCGAAATCT +
Preference number: 2 (lower is better)
Translates to: ASGRCRELSCRPWAALALRRRLS*PQQPKS
Trigger: AGATTTCGGCTGCTGGGGCCAGGACAGGCGTCTCCT...CAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACCTTCCTGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp GGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGCTGTGTCCAGGCCAGCTCTTGGAGTTaGCACGGTACAGGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: GAASSPAVPGPPWLCCVQASSWS*HGTGRR
Trigger: TCTCCTCCCTGTACCGTGTCAACTCCAAGAGCTGGC...CTGGACACAGCAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR GCA 90 bp GCCTCAGGAAGGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGGATCCCAGCACAGACTaGTGCCACCCTCAGCTGTTG +
Preference number: 2 (lower is better)
Translates to: ASGRCRELSCRPWAALALDPSTD*CHPQLL
Trigger: CAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATC...CAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACCTTCCTGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GCCTCAGGAAGGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGGGTAGCAGAGGCCTATaGTGGGCAGGACTTGCCCAA +
Preference number: 2 (lower is better)
Translates to: ASGRCRELSCRPWAALALGSRGL*WAGLAQ
Trigger: TTGGGCAAGTCCTGCCCACCATAGGCCTCTGCTACC...CAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACCTTCCTGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp GGCTGGGCCCTCACTCCTGACCGCCAGCTCACACCGCCGCAAAGCCATCTCCACGGTGAACTTCCCCGCTaGCTGGCAGGTAGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: GWALTPDRQLTPPQSHLHGELPR*LAGSRG
Trigger: GCCTCTGCTACCTGCCAGTCAGCGGGGAAGTTCACC...GTGGAGATGGCTTTGCGGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp GCCTCAGGAAGGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGGAGGCCCCGTGCCACTaGGCATCCAGAAATAAACCA +
Preference number: 2 (lower is better)
Translates to: ASGRCRELSCRPWAALALEAPCH*ASRNKP
Trigger: TGGTTTATTTCTGGATGCTCAGTGGCACGGGGCCTC...CAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACCTTCCTGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp GAGGGCCCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGAGGGGTTCTTGGTCGCTaGGATGTGAGAGGAGGGCTC +
Preference number: 2 (lower is better)
Translates to: EGPVLCGHCWAVASLGAGGVLGR*DVRGGL
Trigger: GAGCCCTCCTCTCACATCTCAGCGACCAAGAACCCC...TCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGGGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR GCA 90 bp GGAGGTGCCGGGAAGGCTGGGCCCTCACTCCTGACCGCCAGCTCACACCGCCGCGTGAGCTCAAAGCTCTaGCAGGCAACCATGGGCAGT +
Preference number: 2 (lower is better)
Translates to: GGAGKAGPSLLTASSHRRVSSKL*QATMGS
Trigger: ACTGCCCATGGTTGCCTGGCAGAGCTTTGAGCTCAC...GCGGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAGCCTTCCCGGCACCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR GCA 90 bp GCCTCAGGAAGGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGGTAATTGGGGTCTTCTaGAGGGGCATCCAGGAGCAG +
Preference number: 2 (lower is better)
Translates to: ASGRCRELSCRPWAALALVIGVF*RGIQEQ
Trigger: CTGCTCCTGGATGCCCCTGCAGAAGACCCCAATTAC...CAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACCTTCCTGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GGAGGTGCCGGGAAGGCTGGGCCCTCACTCCTGACCGCCAGCTCACACCGCCGCATGACAACCTGTCTTTaGAGGAGGCCCCGTGCCACT +
Preference number: 2 (lower is better)
Translates to: GGAGKAGPSLLTASSHRRMTTCL*RRPRAT
Trigger: AGTGGCACGGGGCCTCCTCCAAAGACAGGTTGTCAT...GCGGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAGCCTTCCCGGCACCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp CCCTGGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGAGGTGCCGGGAAGGCTaGGCCCTCACTCCTGACCGC +
Preference number: 2 (lower is better)
Translates to: PWLCCVQMVRLLPAGALLRCREG*ALTPDR
Trigger: GCGGTCAGGAGTGAGGGCCCAGCCTTCCCGGCACCT...CAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp CCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGAGGGCTGAGGAGCAGCTTTCTGTaGGGAGGGGCCCGTGTTGAG +
Preference number: 2 (lower is better)
Translates to: PVLCGHCWAVASLGAGGLRSSFL*GGARVE
Trigger: CTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCCT...CAGCCCTCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp GGCTGGGCCCTCACTCCTGACCGCCAGCTCACACCGCCGCAAAGCCATCTCCACCTGCCTGGCAACCTGTaGGCTCAAAGCTCTGCCAGG +
Preference number: 2 (lower is better)
Translates to: GWALTPDRQLTPPQSHLHLPGNL*AQSSAR
Trigger: CCTGGCAGAGCTTTGAGCTCACAGGTTGCCAGGCAG...GTGGAGATGGCTTTGCGGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp CAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGCTGCAGGTGCCGGGAAGGCTaGGCCCTCACTCCTGACCGC +
Preference number: 2 (lower is better)
Translates to: QIPAQTAATLSCWQVPCCRCREG*ALTPDR
Trigger: GCGGTCAGGAGTGAGGGCCCAGCCTTCCCGGCACCT...GCAGCATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp GGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGCTCTGCTGAGAGGCCACACTaGGTGAGGACGGGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: GSAVSRWSGYCQLGPCCSAERPH*VRTGQA
Trigger: TGCCTGCCCCGTCCTCACTCAGTGTGGCCTCTCAGC...AGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp GAGGGCCCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGATTGGTCGCTGAGATGTaGGAGGAGGGCTCCTTTGAG +
Preference number: 2 (lower is better)
Translates to: EGPVLCGHCWAVASLGAGLVAEM*EEGSFE
Trigger: CTCAAAGGAGCCCTCCTCTCACATCTCAGCGACCAA...TCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGGGCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GCCTCAGGAAGGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGGAGCACATGTTAGCATaGGACTCTTCCCAGGGAGTT +
Preference number: 2 (lower is better)
Translates to: ASGRCRELSCRPWAALALEHMLA*DSSQGV
Trigger: AACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTC...CAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACCTTCCTGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GGCACAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGGGCTGCTGTGCTCCCTaGAAGTGGGGTAGGGCCCCA +
Preference number: 2 (lower is better)
Translates to: GTDPSTDCCHPQLLAGPMGCCAP*KWGRAP
Trigger: TGGGGCCCTACCCCACTTCCAGGGAGCACAGCAGCC...CATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp GGCTGGGCCCTCACTCCTGACCGCCAGCTCACACCGCCGCAAAGCCATCTCCACGAGGCCCCGTGCCACTaGGCATCCAGAAATAAACCA +
Preference number: 2 (lower is better)
Translates to: GWALTPDRQLTPPQSHLHEAPCH*ASRNKP
Trigger: TGGTTTATTTCTGGATGCTCAGTGGCACGGGGCCTC...GTGGAGATGGCTTTGCGGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR GCA 90 bp GGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGCTCTCAGCTGGGGCCTTGCTaGTCTGAAGTCCCCTGCGGA +
Preference number: 2 (lower is better)
Translates to: GSAVSRWSGYCQLGPCCSQLGPC*SEVPCG
Trigger: TCCGCAGGGGACTTCAGAGCAGCAAGGCCCCAGCTG...AGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp CCCTGGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGGGGAAGCCAGTGCTGTaGGCCAAGAGACTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: PWLCCVQMVRLLPAGALLGKPVL*AKRLQL
Trigger: GAGCTGCAGTCTCTTGGCCCACAGCACTGGCTTCCC...CAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGTGGGGGTCACGGGAAGCCAGTGCTGTaGGCCAAGAGACTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: GRMEAARSLLGLALGGGHGKPVL*AKRLQL
Trigger: GAGCTGCAGTCTCTTGGCCCACAGCACTGGCTTCCC...GTGACCCCCACCCAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp GGCACAGATCCGGGCACAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGCCGAAATCTGGTaGACTTCCCCGCTGACTGGC +
Preference number: 2 (lower is better)
Translates to: GTDPGTDPSTDCCHPQLLAAEIW*TSPLTG
Trigger: GCCAGTCAGCGGGGAAGTTCACCAGATTTCGGCTGC...CAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTGTGCCCGGATCTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp GAGGGCCCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGATCACCAGATGAAAAATaGGGCATACGCCCACCTGTC +
Preference number: 2 (lower is better)
Translates to: EGPVLCGHCWAVASLGAGSPDEK*GIRPPV
Trigger: GACAGGTGGGCGTATGCCTCATTTTTCATCTGGTGA...TCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGGGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR GCA 90 bp CCTGGGTGCAGGAGGGCTGTTCTAGCTCCAGTGGCACCCATAGCCAGGTCAGCTGCTAGGGTCAGAGGCTaGTGTGCTCCCTGGAAGTGG +
Preference number: 2 (lower is better)
Translates to: PGCRRAVLAPVAPIARSAARVRG*CAPWKW
Trigger: CCACTTCCAGGGAGCACAGCAGCCTCTGACCCTAGC...AGCTGACCTGGCTATGGGTGCCACTGGAGCTAGAACAGCCCTCCTGCACCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR GCA 90 bp GGCACAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGGCTAGGGTCAGAGGCTaGTGTGCTCCCTGGAAGTGG +
Preference number: 2 (lower is better)
Translates to: GTDPSTDCCHPQLLAGPMARVRG*CAPWKW
Trigger: CCACTTCCAGGGAGCACAGCAGCCTCTGACCCTAGC...CATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR GCA 90 bp GAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCCTGGGTGGGGGTCACTaGTGCGGGGGTGGCAGATGG +
Preference number: 2 (lower is better)
Translates to: EHMLAWDSSQGVCTQGLCLGGGH*CGGGRW
Trigger: CCATCTGCCACCCCCGCAGCAGTGACCCCCACCCAG...GCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp ATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGTGGGGGTGGGAAGCCAGTGCTGTaGGCCAAGAGACTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: MGRMEAARSLLGLALGGGGKPVL*AKRLQL
Trigger: GAGCTGCAGTCTCTTGGCCCACAGCACTGGCTTCCC...ACCCCCACCCAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp CAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGCTGCAGGAGACGCCTGTCCTaGCCCCAGCAGCCGAAATCT +
Preference number: 2 (lower is better)
Translates to: QIPAQTAATLSCWQVPCCRRRLS*PQQPKS
Trigger: AGATTTCGGCTGCTGGGGCCAGGACAGGCGTCTCCT...GCAGCATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GAGGGCCCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGAGCTCTGATTAGGGATTaGGGTTCTTGGTCGCTGAGA +
Preference number: 2 (lower is better)
Translates to: EGPVLCGHCWAVASLGAGALIRD*GSWSLR
Trigger: TCTCAGCGACCAAGAACCCCAATCCCTAATCAGAGC...TCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGGGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp ATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGTGGGGGTAGGAGCAGCTTTCTGTaGGGAGGGGCCCGTGTTGAG +
Preference number: 2 (lower is better)
Translates to: MGRMEAARSLLGLALGGGRSSFL*GGARVE
Trigger: CTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCCT...ACCCCCACCCAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
3UTR-3UTR CCA 90 bp CCCTGGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGGGAGGGGCAGGTAATTaGGGTCTTCTGCAGGGGCAT +
Preference number: 2 (lower is better)
Translates to: PWLCCVQMVRLLPAGALLGGAGN*GLLQGH
Trigger: ATGCCCCTGCAGAAGACCCCAATTACCTGCCCCTCC...CAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GCCTTACTGGAAGGCCTTGAACAAAGGGGAAGATTCCCAGCCCAGCTGCTCTTAAGGCCTGGCCCTGGGTaGGGGTCACTGCTGCGGGGG +
Preference number: 2 (lower is better)
Translates to: ALLEGLEQRGRFPAQLLLRPGPG*GSLLRG
Trigger: CCCCCGCAGCAGTGACCCCCACCCAGGGCCAGGCCT...TAAGAGCAGCTGGGCTGGGAATCTTCCCCTTTGTTCAAGGCCTTCCAGTAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp GAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCGCTGAGAGGCCACACTaGGTGAGGACGGGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: EHMLAWDSSQGVCTQGLCAERPH*VRTGQA
Trigger: TGCCTGCCCCGTCCTCACTCAGTGTGGCCTCTCAGC...GCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp CTCCCGGCCTGGTGCCAGCTCTTGGAGTTGACACGGTACAGGGAGGAGACACAGGCCCTCTTCTGCACCTaGATCCATGGGGCTTTGGCA +
Preference number: 2 (lower is better)
Translates to: LPAWCQLLELTRYREETQALFCT*IHGALA
Trigger: TGCCAAAGCCCCATGGATTCAGGTGCAGAAGAGGGC...CTGTGTCTCCTCCCTGTACCGTGTCAACTCCAAGAGCTGGCACCAGGCCGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp GGCACAGATCCGGGCACAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGTCGGCAATGAAAGGGTaGGGCAGCCCTGTGTCTCCA +
Preference number: 2 (lower is better)
Translates to: GTDPGTDPSTDCCHPQLLSAMKG*GSPVSP
Trigger: TGGAGACACAGGGCTGCCTCACCCTTTCATTGCCGA...CAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTGTGCCCGGATCTGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp GAGGGCCCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGATGTTTGTTCTGTCCATaGGGTAGGAACCTCGGCAAT +
Preference number: 2 (lower is better)
Translates to: EGPVLCGHCWAVASLGAGCLFCP*GRNLGN
Trigger: ATTGCCGAGGTTCCTACCTCATGGACAGAACAAACA...TCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGGGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp GGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGCTCTGCCAGCTCTTGGAGTTaGCACGGTACAGGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: GSAVSRWSGYCQLGPCCSASSWS*HGTGRR
Trigger: TCTCCTCCCTGTACCGTGTCAACTCCAAGAGCTGGC...AGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR GCA 90 bp CCTGGGTGCAGGAGGGCTGTTCTAGCTCCAGTGGCACCCATAGCCAGGTCAGCTATTCAGGTGGGCCCTTaGATGGGCCCAGCCTTTAGG +
Preference number: 2 (lower is better)
Translates to: PGCRRAVLAPVAPIARSAIQVGP*MGPAFR
Trigger: CCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAAT...AGCTGACCTGGCTATGGGTGCCACTGGAGCTAGAACAGCCCTCCTGCACCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR GCA 90 bp GGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGTGGGGGTCACGTAATTGGGGTCTTCTaGAGGGGCATCCAGGAGCAG +
Preference number: 2 (lower is better)
Translates to: GRMEAARSLLGLALGGGHVIGVF*RGIQEQ
Trigger: CTGCTCCTGGATGCCCCTGCAGAAGACCCCAATTAC...GTGACCCCCACCCAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
3UTR-3UTR CCA 90 bp CCCTGGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGCATCTCCACAAGGTCTaGCTACAACACGGAGGGCAG +
Preference number: 2 (lower is better)
Translates to: PWLCCVQMVRLLPAGALLHLHKV*LQHGGQ
Trigger: CTGCCCTCCGTGTTGTAGCCAGACCTTGTGGAGATG...CAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp AAGCTGCCAGGTCAGAAGAGAAAAATGAGCCACAGGGGTCGGATAAGGCTCACAAGGCCTGGCCCTGGGTaGGGGTCACTGCTGCGGGGG +
Preference number: 2 (lower is better)
Translates to: KLPGQKRKMSHRGRIRLTRPGPG*GSLLRG
Trigger: CCCCCGCAGCAGTGACCCCCACCCAGGGCCAGGCCT...TGTGAGCCTTATCCGACCCCTGTGGCTCATTTTTCTCTTCTGACCTGGCAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp CCCTGGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGCAGCTCCAGCCTTACTaGAGAGAATGGGCACAGATC +
Preference number: 2 (lower is better)
Translates to: PWLCCVQMVRLLPAGALLQLQPY*REWAQI
Trigger: GATCTGTGCCCATTCTCTTCAGTAAGGCTGGAGCTG...CAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGCTCTCCCTCCATCAAAGAGTaGAACTCCCCAGAGCCCCAT +
Preference number: 2 (lower is better)
Translates to: GSAVSRWSGYCQLGPCCSPSIKE*NSPEPH
Trigger: ATGGGGCTCTGGGGAGTTCCACTCTTTGATGGAGGG...AGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GGCACAGATCCGGGCACAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGCCCTCCATCAAAGAGTaGAACTCCCCAGAGCCCCAT +
Preference number: 2 (lower is better)
Translates to: GTDPGTDPSTDCCHPQLLPSIKE*NSPEPH
Trigger: ATGGGGCTCTGGGGAGTTCCACTCTTTGATGGAGGG...CAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTGTGCCCGGATCTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCCATAGCCAGGTCAGCTaGGGCCCTTTCCCACCCCAG +
Preference number: 2 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLHSQVS*GPFPPQ
Trigger: CTGGGGTGGGAAAGGGCCCCAGCTGACCTGGCTATG...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp CACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCCCTTGCGGGGGTGGCAGATaGGGTCCTGGCTGTTCCTCA +
Preference number: 2 (lower is better)
Translates to: HMLAWDSSQGVCTQGLCPCGGGR*GPGCSS
Trigger: TGAGGAACAGCCAGGACCCCATCTGCCACCCCCGCA...AGGGCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp CAGGAGAGGCTAGATTGGCATCAGCCTGAAGGCACCACTGGCAGGAACATCTGTTCACTGCTGCGGGGGTaGCAGATGGGGTCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: QERLDWHQPEGTTGRNICSLLRG*QMGSWL
Trigger: CAGCCAGGACCCCATCTGCCACCCCCGCAGCAGTGA...ACAGATGTTCCTGCCAGTGGTGCCTTCAGGCTGATGCCAATCTAGCCTCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp GAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCGCAGCCGAAATCTGGTaGACTTCCCCGCTGACTGGC +
Preference number: 2 (lower is better)
Translates to: EHMLAWDSSQGVCTQGLCAAEIW*TSPLTG
Trigger: GCCAGTCAGCGGGGAAGTTCACCAGATTTCGGCTGC...GCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp GGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGCTCTGCAGAGGCAGAGCTCTaGTTAGGGATTGGGGTTCTT +
Preference number: 2 (lower is better)
Translates to: GSAVSRWSGYCQLGPCCSAEAEL*LGIGVL
Trigger: AAGAACCCCAATCCCTAATCAGAGCTCTGCCTCTGC...AGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GGCACAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGTTTCTTTGCCCTCTGTaGGCACCCCTATCCTACCAC +
Preference number: 2 (lower is better)
Translates to: GTDPSTDCCHPQLLAGPMFLCPL*APLSYH
Trigger: GTGGTAGGATAGGGGTGCCCACAGAGGGCAAAGAAA...CATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GAGGAGGGCTCCTTTGAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCTGCCCAAGGCCCTGGTaGGGCCAGGATGAGAACCCT +
Preference number: 2 (lower is better)
Translates to: EEGSFEHMLAWDSSQGVCCPRPW*GQDENP
Trigger: AGGGTTCTCATCCTGGCCCCACCAGGGCCTTGGGCA...GCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTCAAAGGAGCCCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp CCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGAGGGCTGGAATCCATGGGGCTTTaGCATCACCAGATGAAAAAT +
Preference number: 2 (lower is better)
Translates to: PVLCGHCWAVASLGAGGLESMGL*HHQMKN
Trigger: ATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTC...CAGCCCTCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GGCACAGATCCGGGCACAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGAGGGATTGGGGTTCTTaGTCGCTGAGATGTGAGAGG +
Preference number: 2 (lower is better)
Translates to: GTDPGTDPSTDCCHPQLLRDWGS*SLRCER
Trigger: CCTCTCACATCTCAGCGACCAAGAACCCCAATCCCT...CAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTGTGCCCGGATCTGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp CTCCCGGCCTGGTGCCAGCTCTTGGAGTTGACACGGTACAGGGAGGAGACACAGAGGGATTGGGGTTCTTaGTCGCTGAGATGTGAGAGG +
Preference number: 2 (lower is better)
Translates to: LPAWCQLLELTRYREETQRDWGS*SLRCER
Trigger: CCTCTCACATCTCAGCGACCAAGAACCCCAATCCCT...CTGTGTCTCCTCCCTGTACCGTGTCAACTCCAAGAGCTGGCACCAGGCCGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCGGGAGGGCAGCAAACTaGCTCGCAGCTCCAGCCTTA +
Preference number: 2 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLGRAAN*LAAPAL
Trigger: TAAGGCTGGAGCTGCGAGCCAGTTTGCTGCCCTCCC...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp CCTGGGTGCAGGAGGGCTGTTCTAGCTCCAGTGGCACCCATAGCCAGGTCAGCTAATGGACACAGGATCTaGGAGGGCAGCAAACTGGCT +
Preference number: 2 (lower is better)
Translates to: PGCRRAVLAPVAPIARSANGHRI*EGSKLA
Trigger: AGCCAGTTTGCTGCCCTCCCAGATCCTGTGTCCATT...AGCTGACCTGGCTATGGGTGCCACTGGAGCTAGAACAGCCCTCCTGCACCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGCTCTCCCCATTCTTCAGAATaGACACAGGATCTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: GSAVSRWSGYCQLGPCCSPHSSE*TQDLGG
Trigger: CCCTCCCAGATCCTGTGTCCATTCTGAAGAATGGGG...AGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp CTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTCACTGCTGCGGGGGTaGCAGATGGGGTCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: LILFIQVGPCMGPAFRMGSLLRG*QMGSWL
Trigger: CAGCCAGGACCCCATCTGCCACCCCCGCAGCAGTGA...ACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
3UTR-3UTR TCA 90 bp GGAGGTGTCCCCATTCTTCAGAATGGACACAGGATCTGGGAGGGCAGCAAACTGCACCTGCAGTTGGGCTaGGAGGCCACACTGAGTGAG +
Preference number: 2 (lower is better)
Translates to: GGVPILQNGHRIWEGSKLHLQLG*EATLSE
Trigger: CTCACTCAGTGTGGCCTCTCAGCCCAACTGCAGGTG...CAGTTTGCTGCCCTCCCAGATCCTGTGTCCATTCTGAAGAATGGGGACACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp GGAGGTGTCCCCATTCTTCAGAATGGACACAGGATCTGGGAGGGCAGCAAACTGGGGGTTCTTGGTCGCTaGGATGTGAGAGGAGGGCTC +
Preference number: 2 (lower is better)
Translates to: GGVPILQNGHRIWEGSKLGVLGR*DVRGGL
Trigger: GAGCCCTCCTCTCACATCTCAGCGACCAAGAACCCC...CAGTTTGCTGCCCTCCCAGATCCTGTGTCCATTCTGAAGAATGGGGACACCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR GCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCCCCTATCCTACCACCTaGAGTTGGGCTGAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLPYPTT*SWAERP
Trigger: TGGCCTCTCAGCCCAACTGCAGGTGGTAGGATAGGG...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp TTTGAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCCCAAGGCCCTGGTaGGGCCAGGATGAGAACCCT +
Preference number: 2 (lower is better)
Translates to: FEHMLAWDSSQGVCTQGLCPRPW*GQDENP
Trigger: AGGGTTCTCATCCTGGCCCCACCAGGGCCTTGGGCA...GAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GGCCTTGAACAAAGGGGAAGATTCCCAGCCCAGCTGCTCTTAGACATGAACAGGTGCCCAAGGCCCTGGTaGGGCCAGGATGAGAACCCT +
Preference number: 2 (lower is better)
Translates to: GLEQRGRFPAQLLLDMNRCPRPW*GQDENP
Trigger: AGGGTTCTCATCCTGGCCCCACCAGGGCCTTGGGCA...CCTGTTCATGTCTAAGAGCAGCTGGGCTGGGAATCTTCCCCTTTGTTCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp ACCACTGGCAGGAACATCTGTAGGCTGGTTTGGCACAACCTAGGAGACGCCTGTAGGAGCAGCTTTCTGTaGGGAGGGGCCCGTGTTGAG +
Preference number: 2 (lower is better)
Translates to: TTGRNICRLVWHNLGDACRSSFL*GGARVE
Trigger: CTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCCT...ACAGGCGTCTCCTAGGTTGTGCCAAACCAGCCTACAGATGTTCCTGCCAGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp CAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGTGGCAGATGGGGTCCTaGCTGTTCCTCAGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: QLILFIQVGPCMGPAFRMWQMGS*LFLREG
Trigger: CCCCTCCCTGAGGAACAGCCAGGACCCCATCTGCCA...CATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
3UTR-3UTR CCA 90 bp CTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTGGCAGATGGGGTCCTaGCTGTTCCTCAGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: LILFIQVGPCMGPAFRMGWQMGS*LFLREG
Trigger: CCCCTCCCTGAGGAACAGCCAGGACCCCATCTGCCA...ACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
3UTR-3UTR TCA 90 bp TTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTTGCTGAGAGGCCACACTaGGTGAGGACGGGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: FCLFRWALAWAQPLGWVFAERPH*VRTGQA
Trigger: TGCCTGCCCCGTCCTCACTCAGTGTGGCCTCTCAGC...AAAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp GGAGGTGTCCCCATTCTTCAGAATGGACACAGGATCTGGGAGGGCAGCAAACTGGCCCTCTTCTGCACCTaGATCCATGGGGCTTTGGCA +
Preference number: 2 (lower is better)
Translates to: GGVPILQNGHRIWEGSKLALFCT*IHGALA
Trigger: TGCCAAAGCCCCATGGATTCAGGTGCAGAAGAGGGC...CAGTTTGCTGCCCTCCCAGATCCTGTGTCCATTCTGAAGAATGGGGACACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp CAAGGGGACAGCTGGGCCTTACTGGAAGGCCTTGAACAAAGGGGAAGATTCCCAGCCCTCTTCTGCACCTaGATCCATGGGGCTTTGGCA +
Preference number: 2 (lower is better)
Translates to: QGDSWALLEGLEQRGRFPALFCT*IHGALA
Trigger: TGCCAAAGCCCCATGGATTCAGGTGCAGAAGAGGGC...TGGGAATCTTCCCCTTTGTTCAAGGCCTTCCAGTAAGGCCCAGCTGTCCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp GGCACAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGTGTTTGTTCTGTCCATaGGGTAGGAACCTCGGCAAT +
Preference number: 2 (lower is better)
Translates to: GTDPSTDCCHPQLLAGPMCLFCP*GRNLGN
Trigger: ATTGCCGAGGTTCCTACCTCATGGACAGAACAAACA...CATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR GCA 90 bp GAGGAGGGCTCCTTTGAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCCCCTATCCTACCACCTaGAGTTGGGCTGAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: EEGSFEHMLAWDSSQGVCPYPTT*SWAERP
Trigger: TGGCCTCTCAGCCCAACTGCAGGTGGTAGGATAGGG...GCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTCAAAGGAGCCCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR GCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCGTGAGCTCAAAGCTCTaGCAGGCAACCATGGGCAGT +
Preference number: 2 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLVSSKL*QATMGS
Trigger: ACTGCCCATGGTTGCCTGGCAGAGCTTTGAGCTCAC...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR GCA 90 bp GGCTGGGCCCTCACTCCTGACCGCCAGCTCACACCGCCGCAAAGCCATCTCCACAACAACAAGGAAAGCTaGCAGGTCAGAAGAGAAAAA +
Preference number: 2 (lower is better)
Translates to: GWALTPDRQLTPPQSHLHNNKES*QVRREK
Trigger: TTTTTCTCTTCTGACCTGGCAGCTTTCCTTGTTGTT...GTGGAGATGGCTTTGCGGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCGGGTCATGGGTAGGATaGAAGCTGCCAGAAGCCTCT +
Preference number: 2 (lower is better)
Translates to: EHMLAWDSSQGVCTQGLCGSWVG*KLPEAS
Trigger: AGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCC...GCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GGCCTTGAACAAAGGGGAAGATTCCCAGCCCAGCTGCTCTTAGACATGAACAGGAGGTGGGCCCTTGCATaGGCCCAGCCTTTAGGATGG +
Preference number: 2 (lower is better)
Translates to: GLEQRGRFPAQLLLDMNRRWALA*AQPLGW
Trigger: CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCT...CCTGTTCATGTCTAAGAGCAGCTGGGCTGGGAATCTTCCCCTTTGTTCAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp CCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGTTCTGTTTATTCAGGTaGGCCCTTGCATGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: PQVGVMGRMEAARSLLGLFCLFR*ALAWAQ
Trigger: CTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA...CAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
3UTR-3UTR CCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCAACTTCCCCGCTGACTaGCAGGTAGCAGAGGCCTAT +
Preference number: 2 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLNFPAD*QVAEAY
Trigger: ATAGGCCTCTGCTACCTGCCAGTCAGCGGGGAAGTT...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp CATCAGCCTGAAGGCACCACTGGCAGGAACATCTGTAGGCTGGTTTGGCACAACGGAGGGGCAGGTAATTaGGGTCTTCTGCAGGGGCAT +
Preference number: 2 (lower is better)
Translates to: HQPEGTTGRNICRLVWHNGGAGN*GLLQGH
Trigger: ATGCCCCTGCAGAAGACCCCAATTACCTGCCCCTCC...GTTGTGCCAAACCAGCCTACAGATGTTCCTGCCAGTGGTGCCTTCAGGCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR GCA 90 bp AGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGATTCAGGTGGGCCCTTaGATGGGCCCAGCCTTTAGG +
Preference number: 2 (lower is better)
Translates to: SSFCLFRWALAWAQPLGWIQVGP*MGPAFR
Trigger: CCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAAT...CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
3UTR-3UTR GCA 90 bp TTTGAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCCCCTATCCTACCACCTaGAGTTGGGCTGAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: FEHMLAWDSSQGVCTQGLPYPTT*SWAERP
Trigger: TGGCCTCTCAGCCCAACTGCAGGTGGTAGGATAGGG...GAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR GCA 90 bp ACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCCCTCCATCAAAGAGTGGAAGTAATTGGGGTCTTCTaGAGGGGCATCCAGGAGCAG +
Preference number: 2 (lower is better)
Translates to: TLPREFALRASALHQRVEVIGVF*RGIQEQ
Trigger: CTGCTCCTGGATGCCCCTGCAGAAGACCCCAATTAC...TTCCACTCTTTGATGGAGGGCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GGAGGTGTCCCCATTCTTCAGAATGGACACAGGATCTGGGAGGGCAGCAAACTGCAGGAGAGGCTAGATTaGCATCAGCCTGAAGGCACC +
Preference number: 2 (lower is better)
Translates to: GGVPILQNGHRIWEGSKLQERLD*HQPEGT
Trigger: GGTGCCTTCAGGCTGATGCCAATCTAGCCTCTCCTG...CAGTTTGCTGCCCTCCCAGATCCTGTGTCCATTCTGAAGAATGGGGACACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GGCCTTGAACAAAGGGGAAGATTCCCAGCCCAGCTGCTCTTAGACATGAACAGGGCCCACCTGTCAGGGTaGCTGATGAGAGACAGGAGA +
Preference number: 2 (lower is better)
Translates to: GLEQRGRFPAQLLLDMNRAHLSG*LMRDRR
Trigger: TCTCCTGTCTCTCATCAGCCACCCTGACAGGTGGGC...CCTGTTCATGTCTAAGAGCAGCTGGGCTGGGAATCTTCCCCTTTGTTCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp ATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTTGCGGGGGTGGCAGATaGGGTCCTGGCTGTTCCTCA +
Preference number: 2 (lower is better)
Translates to: ILFIQVGPCMGPAFRMGFCGGGR*GPGCSS
Trigger: TGAGGAACAGCCAGGACCCCATCTGCCACCCCCGCA...AAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
3UTR-3UTR TCA 90 bp CAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGCTGCAACAGGTTTCATTGCTaGGGTGTTTGTTCTGTCCAT +
Preference number: 2 (lower is better)
Translates to: QIPAQTAATLSCWQVPCCNRFHC*GVCSVH
Trigger: ATGGACAGAACAAACACCTCAGCAATGAAACCTGTT...GCAGCATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp GAGGAGGGCTCCTTTGAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCAGAGGAGGGCTCCTTTaGGCACATGTTAGCATGGGA +
Preference number: 2 (lower is better)
Translates to: EEGSFEHMLAWDSSQGVCRGGLL*AHVSMG
Trigger: TCCCATGCTAACATGTGCTCAAAGGAGCCCTCCTCT...GCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTCAAAGGAGCCCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR GCA 90 bp GTTACCATGAAAATGACAACCTGTCTTTGGAGGAGGCCCCGTGCCACTGAGCATATTCAGGTGGGCCCTTaGATGGGCCCAGCCTTTAGG +
Preference number: 2 (lower is better)
Translates to: VTMKMTTCLWRRPRATEHIQVGP*MGPAFR
Trigger: CCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAAT...ATGCTCAGTGGCACGGGGCCTCCTCCAAAGACAGGTTGTCATTTTCATGGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GCCTTACTGGAAGGCCTTGAACAAAGGGGAAGATTCCCAGCCCAGCTGCTCTTAGGGTCATGGGTAGGATaGAAGCTGCCAGAAGCCTCT +
Preference number: 2 (lower is better)
Translates to: ALLEGLEQRGRFPAQLLLGSWVG*KLPEAS
Trigger: AGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCC...TAAGAGCAGCTGGGCTGGGAATCTTCCCCTTTGTTCAAGGCCTTCCAGTAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp TGCAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGAGGGTCATGGGTAGGATaGAAGCTGCCAGAAGCCTCT +
Preference number: 2 (lower is better)
Translates to: CSSFCLFRWALAWAQPLGGSWVG*KLPEAS
Trigger: AGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCC...TCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
3UTR-3UTR CCA 90 bp AGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGGGTCATGGGTAGGATaGAAGCTGCCAGAAGCCTCT +
Preference number: 2 (lower is better)
Translates to: SSFCLFRWALAWAQPLGWGSWVG*KLPEAS
Trigger: AGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCC...CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
3UTR-3UTR CCA 90 bp CAAGGGGACAGCTGGGCCTTACTGGAAGGCCTTGAACAAAGGGGAAGATTCCCAAGGCATAGAAGGATGTaGCCAGGTGAGATGGGGAAG +
Preference number: 2 (lower is better)
Translates to: QGDSWALLEGLEQRGRFPRHRRM*PGEMGK
Trigger: CTTCCCCATCTCACCTGGCCACATCCTTCTATGCCT...TGGGAATCTTCCCCTTTGTTCAAGGCCTTCCAGTAAGGCCCAGCTGTCCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp CATCAGCCTGAAGGCACCACTGGCAGGAACATCTGTAGGCTGGTTTGGCACAACTCTGCCAGGCAACCATaGGCAGTTTCTTTGCCCTCT +
Preference number: 2 (lower is better)
Translates to: HQPEGTTGRNICRLVWHNSARQP*AVSLPS
Trigger: AGAGGGCAAAGAAACTGCCCATGGTTGCCTGGCAGA...GTTGTGCCAAACCAGCCTACAGATGTTCCTGCCAGTGGTGCCTTCAGGCTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GTTACCATGAAAATGACAACCTGTCTTTGGAGGAGGCCCCGTGCCACTGAGCATGGTAGCAGAGGCCTATaGTGGGCAGGACTTGCCCAA +
Preference number: 2 (lower is better)
Translates to: VTMKMTTCLWRRPRATEHGSRGL*WAGLAQ
Trigger: TTGGGCAAGTCCTGCCCACCATAGGCCTCTGCTACC...ATGCTCAGTGGCACGGGGCCTCCTCCAAAGACAGGTTGTCATTTTCATGGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GGCCTTGAACAAAGGGGAAGATTCCCAGCCCAGCTGCTCTTAGACATGAACAGGAACTTCCCCGCTGACTaGCAGGTAGCAGAGGCCTAT +
Preference number: 2 (lower is better)
Translates to: GLEQRGRFPAQLLLDMNRNFPAD*QVAEAY
Trigger: ATAGGCCTCTGCTACCTGCCAGTCAGCGGGGAAGTT...CCTGTTCATGTCTAAGAGCAGCTGGGCTGGGAATCTTCCCCTTTGTTCAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp CAAGGGGACAGCTGGGCCTTACTGGAAGGCCTTGAACAAAGGGGAAGATTCCCAATCTGTAGGCTGGTTTaGCACAACCTAGGAGACGCC +
Preference number: 2 (lower is better)
Translates to: QGDSWALLEGLEQRGRFPICRLV*HNLGDA
Trigger: GGCGTCTCCTAGGTTGTGCCAAACCAGCCTACAGAT...TGGGAATCTTCCCCTTTGTTCAAGGCCTTCCAGTAAGGCCCAGCTGTCCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GGAGGTGTCCCCATTCTTCAGAATGGACACAGGATCTGGGAGGGCAGCAAACTGCTGCACCTGAATCCATaGGGCTTTGGCATCACCAGA +
Preference number: 2 (lower is better)
Translates to: GGVPILQNGHRIWEGSKLLHLNP*GFGITR
Trigger: TCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAG...CAGTTTGCTGCCCTCCCAGATCCTGTGTCCATTCTGAAGAATGGGGACACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp AGGAGGCCCCGTGCCACTGAGCATCCAGAAATAAACCACAACATGGACAGGCTTCATCTCCACAAGGTCTaGCTACAACACGGAGGGCAG +
Preference number: 2 (lower is better)
Translates to: RRPRATEHPEINHNMDRLHLHKV*LQHGGQ
Trigger: CTGCCCTCCGTGTTGTAGCCAGACCTTGTGGAGATG...AAGCCTGTCCATGTTGTGGTTTATTTCTGGATGCTCAGTGGCACGGGGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp ATTCCCAGCCCAGCTGCTCTTAGACATGAACAGGTTTCATTGCTGAGGTGTTTGTGGCAGATGGGGTCCTaGCTGTTCCTCAGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: IPSPAALRHEQVSLLRCLWQMGS*LFLREG
Trigger: CCCCTCCCTGAGGAACAGCCAGGACCCCATCTGCCA...CAAACACCTCAGCAATGAAACCTGTTCATGTCTAAGAGCAGCTGGGCTGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp TCTTCTGCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATGAGGCATGCGGGGGTGGCAGATaGGGTCCTGGCTGTTCCTCA +
Preference number: 2 (lower is better)
Translates to: SSAPESMGLWHHQMKNEACGGGR*GPGCSS
Trigger: TGAGGAACAGCCAGGACCCCATCTGCCACCCCCGCA...TGCCTCATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCTTTGGCATCACCAGATaGAAAATGAGGCATACGCCC +
Preference number: 2 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLFGITR*KMRHTP
Trigger: GGGCGTATGCCTCATTTTTCATCTGGTGATGCCAAA...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR GCA 90 bp ATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTATTCAGGTGGGCCCTTaGATGGGCCCAGCCTTTAGG +
Preference number: 2 (lower is better)
Translates to: ILFIQVGPCMGPAFRMGFIQVGP*MGPAFR
Trigger: CCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAAT...AAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
3UTR-3UTR GCA 90 bp TTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTTAGATGGGGAAGCCAGTaGTGTGGGCCAAGAGACTGC +
Preference number: 2 (lower is better)
Translates to: FCLFRWALAWAQPLGWVFRWGSQ*CGPRDC
Trigger: GCAGTCTCTTGGCCCACAGCACTGGCTTCCCCATCT...AAAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR GCA 90 bp GGCACAGATCCGGGCACAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGAACAACAAGGAAAGCTaGCAGGTCAGAAGAGAAAAA +
Preference number: 2 (lower is better)
Translates to: GTDPGTDPSTDCCHPQLLNNKES*QVRREK
Trigger: TTTTTCTCTTCTGACCTGGCAGCTTTCCTTGTTGTT...CAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTGTGCCCGGATCTGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GGCCTTGAACAAAGGGGAAGATTCCCAGCCCAGCTGCTCTTAGACATGAACAGGTTCTGTTTATTCAGGTaGGCCCTTGCATGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: GLEQRGRFPAQLLLDMNRFCLFR*ALAWAQ
Trigger: CTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA...CCTGTTCATGTCTAAGAGCAGCTGGGCTGGGAATCTTCCCCTTTGTTCAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp AGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGTTCTGTTTATTCAGGTaGGCCCTTGCATGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: SSFCLFRWALAWAQPLGWFCLFR*ALAWAQ
Trigger: CTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA...CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
3UTR-3UTR CCA 90 bp TTTGAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCCTGTGTCTCCACAACTaGGGGGATGGAAGGAACCTT +
Preference number: 2 (lower is better)
Translates to: FEHMLAWDSSQGVCTQGLLCLHN*GDGRNL
Trigger: AAGGTTCCTTCCATCCCCCCAGTTGTGGAGACACAG...GAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp ATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTGGAGGGGCAGGTAATTaGGGTCTTCTGCAGGGGCAT +
Preference number: 2 (lower is better)
Translates to: ILFIQVGPCMGPAFRMGFGGAGN*GLLQGH
Trigger: ATGCCCCTGCAGAAGACCCCAATTACCTGCCCCTCC...AAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
3UTR-3UTR CCA 90 bp AAAGCTGCCAGGTCAGAAGAGAAAAATGAGCCACAGGGGTCGGATAAGGCTCACAGGCATAGAAGGATGTaGCCAGGTGAGATGGGGAAG +
Preference number: 2 (lower is better)
Translates to: KAARSEEKNEPQGSDKAHRHRRM*PGEMGK
Trigger: CTTCCCCATCTCACCTGGCCACATCCTTCTATGCCT...GTGAGCCTTATCCGACCCCTGTGGCTCATTTTTCTCTTCTGACCTGGCAGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATGAGGCATACGCCAGGCATAGAAGGATGTaGCCAGGTGAGATGGGGAAG +
Preference number: 2 (lower is better)
Translates to: APESMGLWHHQMKNEAYARHRRM*PGEMGK
Trigger: CTTCCCCATCTCACCTGGCCACATCCTTCTATGCCT...GGCGTATGCCTCATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp AAGCTGCCAGGTCAGAAGAGAAAAATGAGCCACAGGGGTCGGATAAGGCTCACATTTCTTTGCCCTCTGTaGGCACCCCTATCCTACCAC +
Preference number: 2 (lower is better)
Translates to: KLPGQKRKMSHRGRIRLTFLCPL*APLSYH
Trigger: GTGGTAGGATAGGGGTGCCCACAGAGGGCAAAGAAA...TGTGAGCCTTATCCGACCCCTGTGGCTCATTTTTCTCTTCTGACCTGGCAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp GCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATGAGGCATACGCCCTGCACCTGAATCCATaGGGCTTTGGCATCACCAGA +
Preference number: 2 (lower is better)
Translates to: APESMGLWHHQMKNEAYALHLNP*GFGITR
Trigger: TCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAG...GGCGTATGCCTCATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp ATTCCCAGCCCAGCTGCTCTTAGACATGAACAGGTTTCATTGCTGAGGTGTTTGGGATGGAAGGAACCTTaGCTGCCTCACCCCACAGGT +
Preference number: 2 (lower is better)
Translates to: IPSPAALRHEQVSLLRCLGWKEP*LPHPTG
Trigger: ACCTGTGGGGTGAGGCAGCCAAGGTTCCTTCCATCC...CAAACACCTCAGCAATGAAACCTGTTCATGTCTAAGAGCAGCTGGGCTGGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR TCA 90 bp AGGAGGCCCCGTGCCACTGAGCATCCAGAAATAAACCACAACATGGACAGGCTTTTTGGCATCACCAGATaGAAAATGAGGCATACGCCC +
Preference number: 2 (lower is better)
Translates to: RRPRATEHPEINHNMDRLFGITR*KMRHTP
Trigger: GGGCGTATGCCTCATTTTTCATCTGGTGATGCCAAA...AAGCCTGTCCATGTTGTGGTTTATTTCTGGATGCTCAGTGGCACGGGGCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR GCA 90 bp TCTTCTGCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATGAGGCAGTGAGCTCAAAGCTCTaGCAGGCAACCATGGGCAGT +
Preference number: 2 (lower is better)
Translates to: SSAPESMGLWHHQMKNEAVSSKL*QATMGS
Trigger: ACTGCCCATGGTTGCCTGGCAGAGCTTTGAGCTCAC...TGCCTCATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp TTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTTTTCTGTTTATTCAGGTaGGCCCTTGCATGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: FCLFRWALAWAQPLGWVFFCLFR*ALAWAQ
Trigger: CTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA...AAAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
3UTR-3UTR TCA 90 bp GCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATGAGGCATACGCCTTTGGCATCACCAGATaGAAAATGAGGCATACGCCC +
Preference number: 2 (lower is better)
Translates to: APESMGLWHHQMKNEAYAFGITR*KMRHTP
Trigger: GGGCGTATGCCTCATTTTTCATCTGGTGATGCCAAA...GGCGTATGCCTCATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp ATTCCCAGCCCAGCTGCTCTTAGACATGAACAGGTTTCATTGCTGAGGTGTTTGATCTGTAGGCTGGTTTaGCACAACCTAGGAGACGCC +
Preference number: 2 (lower is better)
Translates to: IPSPAALRHEQVSLLRCLICRLV*HNLGDA
Trigger: GGCGTCTCCTAGGTTGTGCCAAACCAGCCTACAGAT...CAAACACCTCAGCAATGAAACCTGTTCATGTCTAAGAGCAGCTGGGCTGGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp AAGCTGCCAGGTCAGAAGAGAAAAATGAGCCACAGGGGTCGGATAAGGCTCACAGAATCCATGGGGCTTTaGCATCACCAGATGAAAAAT +
Preference number: 2 (lower is better)
Translates to: KLPGQKRKMSHRGRIRLTESMGL*HHQMKN
Trigger: ATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTC...TGTGAGCCTTATCCGACCCCTGTGGCTCATTTTTCTCTTCTGACCTGGCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CCA 90 bp TGGCCCTCTTCTGCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATGAATCCATGGGGCTTTaGCATCACCAGATGAAAAAT +
Preference number: 2 (lower is better)
Translates to: WPSSAPESMGLWHHQMKNESMGL*HHQMKN
Trigger: ATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTC...ATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAGAAGAGGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CAA 90 bp GGAGGTGCCGGGAAGGCTGGGCCCTCACTCCTGACCGCCAGCTCACACCGCCGCTATGGTGGGCAGGACTaGCCCAAGGCCCTGGTGGGG +
Preference number: 3 (lower is better)
Translates to: GGAGKAGPSLLTASSHRRYGGQD*PKALVG
Trigger: CCCCACCAGGGCCTTGGGCAAGTCCTGCCCACCATA...GCGGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAGCCTTCCCGGCACCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR CCA 72 bp TCCCCTGCGGAGGGCCCAGTCCTGTGTGGGCACTGCTaGGCTGTCGCCAGCCTGGGTGCAGGAGGGCTGTTC +
Preference number: 3 (lower is better)
Translates to: SPAEGPVLCGHC*AVASLGAGGLF
Trigger: GAACAGCCCTCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGGGCCCTCCGCAGGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR GCA 72 bp GCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTaGTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGG +
Preference number: 3 (lower is better)
Translates to: ASSPAVPGPPWL*CVQMVRLLPAG
Trigger: CCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CAA 90 bp CCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGAGGGCTGTGCCACCCTCAGCTGTaGGCAGGTCCCATGCTGCCA +
Preference number: 3 (lower is better)
Translates to: PVLCGHCWAVASLGAGGLCHPQL*AGPMLP
Trigger: TGGCAGCATGGGACCTGCCAACAGCTGAGGGTGGCA...CAGCCCTCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR GCA 72 bp TCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTaGTCTGAAGTCCCCTGCGGAGGGCCCAGTCCTGTG +
Preference number: 3 (lower is better)
Translates to: SRWSGYCQLGPC*SEVPCGGPSPV
Trigger: CACAGGACTGGGCCCTCCGCAGGGGACTTCAGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR GCA 72 bp GTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTaGTGCTCTGAAGTCCCCTGCGGAGGGCCCAGTCCT +
Preference number: 3 (lower is better)
Translates to: VSRWSGYCQLGP*CSEVPCGGPSP
Trigger: AGGACTGGGCCCTCCGCAGGGGACTTCAGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR CCA 72 bp GCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTaGGGCCTTGCTGCTCTGAAGTCCCCTGCGGAGGGC +
Preference number: 3 (lower is better)
Translates to: ALLCPDGQATAS*GLAALKSPAEG
Trigger: GCCCTCCGCAGGGGACTTCAGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR CCA 72 bp AGGCCTATGGTGGGCAGGACTTGCCCAAGGCCCTGGTaGGGCCAGGATGAGAACCCTGAGCCTGTCACCTGT +
Preference number: 3 (lower is better)
Translates to: RPMVGRTCPRPW*GQDENPEPVTC
Trigger: ACAGGTGACAGGCTCAGGGTTCTCATCCTGGCCCCACCAGGGCCTTGGGCAAGTCCTGCCCACCATAGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CAA 90 bp CCCTGGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGCCATGGGCAGTTTCTTaGCCCTCTGTGGGCACCCCT +
Preference number: 3 (lower is better)
Translates to: PWLCCVQMVRLLPAGALLPWAVS*PSVGTP
Trigger: AGGGGTGCCCACAGAGGGCAAAGAAACTGCCCATGG...CAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CAA 90 bp GGCACAGATCCGGGCACAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGCTCTTCCCAGGGAGTTaGCACTCAGGGCCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: GTDPGTDPSTDCCHPQLLLFPGS*HSGPLP
Trigger: GGGCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAG...CAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTGTGCCCGGATCTGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CAA 90 bp CAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGCTGCCCATGGGCAGTTTCTTaGCCCTCTGTGGGCACCCCT +
Preference number: 3 (lower is better)
Translates to: QIPAQTAATLSCWQVPCCPWAVS*PSVGTP
Trigger: AGGGGTGCCCACAGAGGGCAAAGAAACTGCCCATGG...GCAGCATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CAA 90 bp GAGGGCCCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGACCTTACTGGAAGGCCTaGAACAAAGGGGAAGATTCC +
Preference number: 3 (lower is better)
Translates to: EGPVLCGHCWAVASLGAGPYWKA*NKGEDS
Trigger: GGAATCTTCCCCTTTGTTCAAGGCCTTCCAGTAAGG...TCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR TCA 72 bp TGGCCCCAGCAGCCGAAATCTGGTGAACTTCCCCGCTaGCTGGCAGGTAGCAGAGGCCTATGGTGGGCAGGA +
Preference number: 3 (lower is better)
Translates to: WPQQPKSGELPR*LAGSRGLWWAG
Trigger: TCCTGCCCACCATAGGCCTCTGCTACCTGCCAGTCAGCGGGGAAGTTCACCAGATTTCGGCTGCTGGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CAA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCTATGGTGGGCAGGACTaGCCCAAGGCCCTGGTGGGG +
Preference number: 3 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLYGGQD*PKALVG
Trigger: CCCCACCAGGGCCTTGGGCAAGTCCTGCCCACCATA...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR GCA 72 bp GCTGTGAGGAATATGGGAATAGCCCTCCCGGCCTGGTaGCAGCTCTTGGAGTTGACACGGTACAGGGAGGAG +
Preference number: 3 (lower is better)
Translates to: AVRNMGIALPAW*QLLELTRYREE
Trigger: CTCCTCCCTGTACCGTGTCAACTCCAAGAGCTGGCACCAGGCCGGGAGGGCTATTCCCATATTCCTCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CAA 90 bp GAGGAGGGCTCCTTTGAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCGGGATGGAAGGAACCTaGGCTGCCTCACCCCACAGG +
Preference number: 3 (lower is better)
Translates to: EEGSFEHMLAWDSSQGVCGMEGT*AASPHR
Trigger: CCTGTGGGGTGAGGCAGCCAAGGTTCCTTCCATCCC...GCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTCAAAGGAGCCCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CAA 90 bp GGAGGTGTCCCCATTCTTCAGAATGGACACAGGATCTGGGAGGGCAGCAAACTGCTCTTCCCAGGGAGTTaGCACTCAGGGCCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: GGVPILQNGHRIWEGSKLLFPGS*HSGPLP
Trigger: GGGCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAG...CAGTTTGCTGCCCTCCCAGATCCTGTGTCCATTCTGAAGAATGGGGACACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR GCA 72 bp CTCAAAGCTCTGCCAGGCAACCATGGGCAGTTTCTTTaGCCTCTGTGGGCACCCCTATCCTACCACCTGCAG +
Preference number: 3 (lower is better)
Translates to: LKALPGNHGQFL*PLWAPLSYHLQ
Trigger: CTGCAGGTGGTAGGATAGGGGTGCCCACAGAGGGCAAAGAAACTGCCCATGGTTGCCTGGCAGAGCTTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR CCA 72 bp CCTGAGCCTGTCACCTGTGAGCTCAAAAGCTCTGCCTaGCAACCTGTGAGCTCAAAGCTCTGCCAGGCAACC +
Preference number: 3 (lower is better)
Translates to: PEPVTCELKSSA*QPVSSKLCQAT
Trigger: GGTTGCCTGGCAGAGCTTTGAGCTCACAGGTTGCCAGGCAGAGCTTTTGAGCTCACAGGTGACAGGCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR CCA 72 bp CCCATGTGGGGCAGAGGCAGAGCTCTGATTAGGGATTaGGGTTCTTGGTCGCTGAGATGTGAGAGGAGGGCT +
Preference number: 3 (lower is better)
Translates to: PMWGRGRALIRD*GSWSLRCERRA
Trigger: AGCCCTCCTCTCACATCTCAGCGACCAAGAACCCCAATCCCTAATCAGAGCTCTGCCTCTGCCCCACATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CAA 90 bp TGGCCCTCTTCTGCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATTATGGTGGGCAGGACTaGCCCAAGGCCCTGGTGGGG +
Preference number: 3 (lower is better)
Translates to: WPSSAPESMGLWHHQMKNYGGQD*PKALVG
Trigger: CCCCACCAGGGCCTTGGGCAAGTCCTGCCCACCATA...ATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAGAAGAGGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR TCA 72 bp ACAGCAAGGGGACAGCTGGGCCTTACTGGAAGGCCTTaGACAAAGGGGAAGATTCCCAGCCCAGCTGCTCTT +
Preference number: 3 (lower is better)
Translates to: TARGQLGLTGRP*TKGKIPSPAAL
Trigger: AAGAGCAGCTGGGCTGGGAATCTTCCCCTTTGTTCAAGGCCTTCCAGTAAGGCCCAGCTGTCCCCTTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR CCA 72 bp GGCAGAGGCAGAGCTCTGATTAGGGATTGGGGTTCTTaGTCGCTGAGATGTGAGAGGAGGGCTCCTTTGAGC +
Preference number: 3 (lower is better)
Translates to: GRGRALIRDWGS*SLRCERRAPLS
Trigger: GCTCAAAGGAGCCCTCCTCTCACATCTCAGCGACCAAGAACCCCAATCCCTAATCAGAGCTCTGCCTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CAA 90 bp TTTGAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCAATGACAACCTGTCTTaGGAGGAGGCCCCGTGCCAC +
Preference number: 3 (lower is better)
Translates to: FEHMLAWDSSQGVCTQGLNDNLS*EEAPCH
Trigger: GTGGCACGGGGCCTCCTCCAAAGACAGGTTGTCATT...GAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR TCA 72 bp TCACCTGTGAGCTCAAAAGCTCTGCCTGGCAACCTGTaGGCTCAAAGCTCTGCCAGGCAACCATGGGCAGTT +
Preference number: 3 (lower is better)
Translates to: SPVSSKALPGNL*AQSSARQPWAV
Trigger: AACTGCCCATGGTTGCCTGGCAGAGCTTTGAGCTCACAGGTTGCCAGGCAGAGCTTTTGAGCTCACAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR TCA 72 bp CTGCACCTGAATCCATGGGGCTTTGGCATCACCAGATaGAAAATGAGGCATACGCCCACCTGTCAGGGTGGC +
Preference number: 3 (lower is better)
Translates to: LHLNPWGFGITR*KMRHTPTCQGG
Trigger: GCCACCCTGACAGGTGGGCGTATGCCTCATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR CCA 72 bp GGGCCAAGAGACTGCAGCTCATTCTGTTTATTCAGGTaGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTT +
Preference number: 3 (lower is better)
Translates to: GPRDCSSFCLFR*ALAWAQPLGWV
Trigger: AACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTGCAGTCTCTTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR CCA 72 bp TTCAGAATGGACACAGGATCTGGGAGGGCAGCAAACTaGCTCGCAGCTCCAGCCTTACTGAAGAGAATGGGC +
Preference number: 3 (lower is better)
Translates to: FRMDTGSGRAAN*LAAPALLKRMG
Trigger: GCCCATTCTCTTCAGTAAGGCTGGAGCTGCGAGCCAGTTTGCTGCCCTCCCAGATCCTGTGTCCATTCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CAA 90 bp ATTCCCAGCCCAGCTGCTCTTAGACATGAACAGGTTTCATTGCTGAGGTGTTTGGGGATGGAAGGAACCTaGGCTGCCTCACCCCACAGG +
Preference number: 3 (lower is better)
Translates to: IPSPAALRHEQVSLLRCLGMEGT*AASPHR
Trigger: CCTGTGGGGTGAGGCAGCCAAGGTTCCTTCCATCCC...CAAACACCTCAGCAATGAAACCTGTTCATGTCTAAGAGCAGCTGGGCTGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR CCA 72 bp TCCTGGCCCTCTTCTGCACCTGAATCCATGGGGCTTTaGCATCACCAGATGAAAAATGAGGCATACGCCCAC +
Preference number: 3 (lower is better)
Translates to: SWPSSAPESMGL*HHQMKNEAYAH
Trigger: GTGGGCGTATGCCTCATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAGAAGAGGGCCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR TCA 72 bp AGGGCAGAAGACCTAGTCCTGGCCCTCTTCTGCACCTaGATCCATGGGGCTTTGGCATCACCAGATGAAAAA +
Preference number: 3 (lower is better)
Translates to: RAEDLVLALFCT*IHGALASPDEK
Trigger: TTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAGAAGAGGGCCAGGACTAGGTCTTCTGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR CCA 72 bp TCATCTGTAATAGGGAGGTGTCCCCATTCTTCAGAATaGACACAGGATCTGGGAGGGCAGCAAACTGGCTCG +
Preference number: 3 (lower is better)
Translates to: SSVIGRCPHSSE*TQDLGGQQTGS
Trigger: CGAGCCAGTTTGCTGCCCTCCCAGATCCTGTGTCCATTCTGAAGAATGGGGACACCTCCCTATTACAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR-3UTR CAA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCCATGAACAGGTTTCATaGCTGAGGTGTTTGTTCTGT +
Preference number: 3 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLHEQVS*LRCLFC
Trigger: ACAGAACAAACACCTCAGCAATGAAACCTGTTCATG...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR TCA 72 bp GCCCAGCTGCTCTTAGACATGAACAGGTTTCATTGCTaGGGTGTTTGTTCTGTCCATGAGGTAGGAACCTCG +
Preference number: 3 (lower is better)
Translates to: AQLLLDMNRFHC*GVCSVHEVGTS
Trigger: CGAGGTTCCTACCTCATGGACAGAACAAACACCTCAGCAATGAAACCTGTTCATGTCTAAGAGCAGCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GCCTCAGGAAGGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGAGACGAAGTCGGCCGTaGGGCCGCGGAAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: ASGRCRELSCRPWAALALRRSRP*GRGRSP
Trigger: AGGGCTCCTTCCGCGGCCGCACGGCCGACTTCGTCT...CAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACCTTCCTGAGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGAGGGCTGAGGCCTGGCCCTGGGTaGGGGTCACTGCTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: PVLCGHCWAVASLGAGGLRPGPG*GSLLRG
Trigger: CCCCCGCAGCAGTGACCCCCACCCAGGGCCAGGCCT...CAGCCCTCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGCTGTGTCCAGGTCACCGCCGGCACCTaGAGGAACTCGGCCGCTAGT +
Preference number: 4 (lower is better)
Translates to: GAASSPAVPGPPWLCCVQVTAGT*RNSAAS
Trigger: ACTAGCGGCCGAGTTCCTGCAGGTGCCGGCGGTGAC...CTGGACACAGCAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGCTGTGTCCAGTGGCAGGTCCCATGCTaGCAGGGCAGGGCTAGGGTC +
Preference number: 4 (lower is better)
Translates to: GAASSPAVPGPPWLCCVQWQVPC*QGRARV
Trigger: GACCCTAGCCCTGCCCTGGCAGCATGGGACCTGCCA...CTGGACACAGCAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGAGGGCTGGCAGGGCCACCTGGCTaGGAGGTGCCGGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PVLCGHCWAVASLGAGGLAGPPG*EVPGRL
Trigger: CAGCCTTCCCGGCACCTCCCAGCCAGGTGGCCCTGC...CAGCCCTCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGCTGTGTCCAGCTGTGTGGGCACTGCTaGGCTGTCGCCAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GAASSPAVPGPPWLCCVQLCGHC*AVASLG
Trigger: ACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAG...CTGGACACAGCAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGCTGTGTCCAGCCTGCTCCCCTTGCTTaGCCTCAGGAAGGTGCCGCG +
Preference number: 4 (lower is better)
Translates to: GAASSPAVPGPPWLCCVQPAPLA*PQEGAA
Trigger: CGCGGCACCTTCCTGAGGCCAAGCAAGGGGAGCAGG...CTGGACACAGCAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGAGGGCTGGTGGGCAGGTGGGGGTaGATGGGGCTCCGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: PVLCGHCWAVASLGAGGLVGRWG*MGLRVA
Trigger: TGCTACCCGGAGCCCCATTCACCCCCACCTGCCCAC...CAGCCCTCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GGAGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGGTCCTGCCGCGAGCTCTCCTaGCGTCCCTGGGCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: GAAFCGEGPVLSTGQHRSCRELS*RPWAAL
Trigger: CAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCA...GGACCTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGAGGTGCCGGGAAGGCTGGGCCCTCACTCCTGACCGCCAGCTCACACCGCCGCTGCCCAAGGCCCTGGTaGGGCCAGGATGAGAACCCT +
Preference number: 4 (lower is better)
Translates to: GGAGKAGPSLLTASSHRRCPRPW*GQDENP
Trigger: AGGGTTCTCATCCTGGCCCCACCAGGGCCTTGGGCA...GCGGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAGCCTTCCCGGCACCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGAGGGCTGGCTGAGAGGCCACACTaGGTGAGGACGGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PVLCGHCWAVASLGAGGLAERPH*VRTGQA
Trigger: TGCCTGCCCCGTCCTCACTCAGTGTGGCCTCTCAGC...CAGCCCTCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp GCCTCAGGAAGGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGCACCTGCAGTTGGGCTaGGAGGCCACACTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: ASGRCRELSCRPWAALALHLQLG*EATLSE
Trigger: CTCACTCAGTGTGGCCTCTCAGCCCAACTGCAGGTG...CAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACCTTCCTGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGAGGTGCCGGGAAGGCTGGGCCCTCACTCCTGACCGCCAGCTCACACCGCCGCAGGAGACGCCTGTCCTaGCCCCAGCAGCCGAAATCT +
Preference number: 4 (lower is better)
Translates to: GGAGKAGPSLLTASSHRRRRRLS*PQQPKS
Trigger: AGATTTCGGCTGCTGGGGCCAGGACAGGCGTCTCCT...GCGGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAGCCTTCCCGGCACCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGCTGTGTCCAGGGGAGGGCAGCAAACTaGCTCGCAGCTCCAGCCTTA +
Preference number: 4 (lower is better)
Translates to: GAASSPAVPGPPWLCCVQGRAAN*LAAPAL
Trigger: TAAGGCTGGAGCTGCGAGCCAGTTTGCTGCCCTCCC...CTGGACACAGCAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGAGGTGCCGGGAAGGCTGGGCCCTCACTCCTGACCGCCAGCTCACACCGCCGCGGGAGGGCAGCAAACTaGCTCGCAGCTCCAGCCTTA +
Preference number: 4 (lower is better)
Translates to: GGAGKAGPSLLTASSHRRGRAAN*LAAPAL
Trigger: TAAGGCTGGAGCTGCGAGCCAGTTTGCTGCCCTCCC...GCGGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAGCCTTCCCGGCACCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGTGGGGGTCACCGGGGCGGCCTCACCTaGAACACCGCGGCGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GRMEAARSLLGLALGGGHRGGLT*NTAAVV
Trigger: CACCACCGCCGCGGTGTTCCAGGTGAGGCCGCCCCG...GTGACCCCCACCCAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CCCTGGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGCGGTCAGGTGCGGGGTaGGTGGGTCGGGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: PWLCCVQMVRLLPAGALLRSGAG*VGRAHR
Trigger: CCTGTGGGCCCGACCCACCCACCCCGCACCTGACCG...CAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp GCCTCAGGAAGGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGGCCCTCTTCTGCACCTaGATCCATGGGGCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: ASGRCRELSCRPWAALALALFCT*IHGALA
Trigger: TGCCAAAGCCCCATGGATTCAGGTGCAGAAGAGGGC...CAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACCTTCCTGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp GGAGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGGTCCGTGGGCAGGTGGGGGTaGATGGGGCTCCGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: GAAFCGEGPVLSTGQHRSVGRWG*MGLRVA
Trigger: TGCTACCCGGAGCCCCATTCACCCCCACCTGCCCAC...GGACCTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGCTGTGTCCAGTCGGCCGCTAGTCCCTaGCACGCCATTGAACCTTCT +
Preference number: 4 (lower is better)
Translates to: GAASSPAVPGPPWLCCVQSAASP*HAIEPS
Trigger: AGAAGGTTCAATGGCGTGGCAGGGACTAGCGGCCGA...CTGGACACAGCAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GGAGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGGTCCAGACGAAGTCGGCCGTaGGGCCGCGGAAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GAAFCGEGPVLSTGQHRSRRSRP*GRGRSP
Trigger: AGGGCTCCTTCCGCGGCCGCACGGCCGACTTCGTCT...GGACCTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
CDS-3UTR GCA 90 bp GGAGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGGTCCCTGGGTGGGGGTCACTaGTGCGGGGGTGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: GAAFCGEGPVLSTGQHRSLGGGH*CGGGRW
Trigger: CCATCTGCCACCCCCGCAGCAGTGACCCCCACCCAG...GGACCTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
CDS-3UTR GCA 90 bp GGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGCTGTGTCCAGGTCCCTTCCCAGCCCTaGCTCCAAGGAGTTCATGTC +
Preference number: 4 (lower is better)
Translates to: GAASSPAVPGPPWLCCVQVPSQP*LQGVHV
Trigger: GACATGAACTCCTTGGAGGCAGGGCTGGGAAGGGAC...CTGGACACAGCAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GAGGGCCCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGAGCCCTCCCGGCCTGGTaGCAGCTCTTGGAGTTGACA +
Preference number: 4 (lower is better)
Translates to: EGPVLCGHCWAVASLGAGALPAW*QLLELT
Trigger: TGTCAACTCCAAGAGCTGGCACCAGGCCGGGAGGGC...TCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGGGCCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GGAGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGGTCCCTGAGGAGCTCCAGCTaGACCGCGGCGGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GAAFCGEGPVLSTGQHRSLRSSS*TAAVVR
Trigger: CCTCACCACCGCCGCGGTGCAGCTGGAGCTCCTCAG...GGACCTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476077.1
ENST00000628868.1
CDS-3UTR GCA 90 bp GGAGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGGTCCCCCTCACCCGAGGGCTaGGGCGGCTCCACACGTACA +
Preference number: 4 (lower is better)
Translates to: GAAFCGEGPVLSTGQHRSPSPEG*GGSTRT
Trigger: TGTACGTGTGGAGCCGCCGCAGCCCTCGGGTGAGGG...GGACCTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000476077.1
ENST00000628868.1
CDS-3UTR GCA 90 bp AGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGGTCCCCCCCTCACCCGAGGGCTaGGGCGGCTCCACACGTACA +
Preference number: 4 (lower is better)
Translates to: SSFLWGGARVEHRPAQVPPSPEG*GGSTRT
Trigger: TGTACGTGTGGAGCCGCCGCAGCCCTCGGGTGAGGG...GGGGACCTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000476077.1
ENST00000628868.1
CDS-3UTR CCA 90 bp GGAGGTGCCGGGAAGGCTGGGCCCTCACTCCTGACCGCCAGCTCACACCGCCGCGGAGGGGCAGGTAATTaGGGTCTTCTGCAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: GGAGKAGPSLLTASSHRRGGAGN*GLLQGH
Trigger: ATGCCCCTGCAGAAGACCCCAATTACCTGCCCCTCC...GCGGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAGCCTTCCCGGCACCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GAGGGCCCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGATGCGGGGGTGGCAGATaGGGTCCTGGCTGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: EGPVLCGHCWAVASLGAGCGGGR*GPGCSS
Trigger: TGAGGAACAGCCAGGACCCCATCTGCCACCCCCGCA...TCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGGGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGCTCTAGGCCTGGCCCTGGGTaGGGGTCACTGCTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: GSAVSRWSGYCQLGPCCSRPGPG*GSLLRG
Trigger: CCCCCGCAGCAGTGACCCCCACCCAGGGCCAGGCCT...AGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGCACAGATCCGGGCACAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGAGGCCTGGCCCTGGGTaGGGGTCACTGCTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: GTDPGTDPSTDCCHPQLLRPGPG*GSLLRG
Trigger: CCCCCGCAGCAGTGACCCCCACCCAGGGCCAGGCCT...CAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTGTGCCCGGATCTGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp ATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGTGGGGGTAGGCCTGGCCCTGGGTaGGGGTCACTGCTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: MGRMEAARSLLGLALGGGRPGPG*GSLLRG
Trigger: CCCCCGCAGCAGTGACCCCCACCCAGGGCCAGGCCT...ACCCCCACCCAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
CDS-3UTR CCA 90 bp GAGGGCCCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGATGCCCAAGGCCCTGGTaGGGCCAGGATGAGAACCCT +
Preference number: 4 (lower is better)
Translates to: EGPVLCGHCWAVASLGAGCPRPW*GQDENP
Trigger: AGGGTTCTCATCCTGGCCCCACCAGGGCCTTGGGCA...TCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGGGCCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGTGGGGGTCACTCGGGCAGGGCCACCTaGCTGGGAGGTGCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: GRMEAARSLLGLALGGGHSGRAT*LGGAGK
Trigger: CTTCCCGGCACCTCCCAGCCAGGTGGCCCTGCCCGA...GTGACCCCCACCCAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp GGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGCTGTGTCCAGAGATTGGCATCAGCCTaGAGGCACCACTGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GAASSPAVPGPPWLCCVQRLASA*RHHWQE
Trigger: TTCCTGCCAGTGGTGCCTTCAGGCTGATGCCAATCT...CTGGACACAGCAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGCTGCCTGGGCCCTCACTCCTaGCCGCCAGCTCACACCGCC +
Preference number: 4 (lower is better)
Translates to: QIPAQTAATLSCWQVPCCLGPHS*PPAHTA
Trigger: GGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAG...GCAGCATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp GGCTGGGCCCTCACTCCTGACCGCCAGCTCACACCGCCGCAAAGCCATCTCCACCCACCGCAATCCCTGTaGGACAGCCACGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: GWALTPDRQLTPPQSHLHPPQSL*DSHGLW
Trigger: CCACAGTCCGTGGCTGTCTCACAGGGATTGCGGTGG...GTGGAGATGGCTTTGCGGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GAGGGCCCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGAGCTAGGGTCAGAGGCTaGTGTGCTCCCTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: EGPVLCGHCWAVASLGAGARVRG*CAPWKW
Trigger: CCACTTCCAGGGAGCACAGCAGCCTCTGACCCTAGC...TCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGGGCCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGTGCCGCGAGCTCTCCTaGCGTCCCTGGGCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELCRELS*RPWAAL
Trigger: CAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCA...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR GCA 90 bp GCCTCAGGAAGGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGGGGCAAGAGGCTCTCTaGCTTTCAGGAACAGCCCTA +
Preference number: 4 (lower is better)
Translates to: ASGRCRELSCRPWAALALGQEAL*LSGTAL
Trigger: TAGGGCTGTTCCTGAAAGGCAGAGAGCCTCTTGCCC...CAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACCTTCCTGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGAGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGGTCCTCACTGCTGCGGGGGTaGCAGATGGGGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GAAFCGEGPVLSTGQHRSSLLRG*QMGSWL
Trigger: CAGCCAGGACCCCATCTGCCACCCCCGCAGCAGTGA...GGACCTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
CDS-3UTR CCA 90 bp GTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGAGGCCTGGCCCTGGGTaGGGGTCACTGCTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: VGVMGRMEAARSLLGLALRPGPG*GSLLRG
Trigger: CCCCCGCAGCAGTGACCCCCACCCAGGGCCAGGCCT...CAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp GAGGGCCCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGAGGGAAGCCAGTGCTGTaGGCCAAGAGACTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: EGPVLCGHCWAVASLGAGGKPVL*AKRLQL
Trigger: GAGCTGCAGTCTCTTGGCCCACAGCACTGGCTTCCC...TCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGGGCCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GCCTCAGGAAGGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGAACTTCCCCGCTGACTaGCAGGTAGCAGAGGCCTAT +
Preference number: 4 (lower is better)
Translates to: ASGRCRELSCRPWAALALNFPAD*QVAEAY
Trigger: ATAGGCCTCTGCTACCTGCCAGTCAGCGGGGAAGTT...CAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACCTTCCTGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGAGGTGCCGGGAAGGCTGGGCCCTCACTCCTGACCGCCAGCTCACACCGCCGCCAGGAGAGGCTAGATTaGCATCAGCCTGAAGGCACC +
Preference number: 4 (lower is better)
Translates to: GGAGKAGPSLLTASSHRRQERLD*HQPEGT
Trigger: GGTGCCTTCAGGCTGATGCCAATCTAGCCTCTCCTG...GCGGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAGCCTTCCCGGCACCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGCTCTTCGGGCAGGGCCACCTaGCTGGGAGGTGCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: GSAVSRWSGYCQLGPCCSSGRAT*LGGAGK
Trigger: CTTCCCGGCACCTCCCAGCCAGGTGGCCCTGCCCGA...AGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGCTGGGCCCTCACTCCTGACCGCCAGCTCACACCGCCGCAAAGCCATCTCCACTGTGCTCCCTGGAAGTaGGGTAGGGCCCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: GWALTPDRQLTPPQSHLHCAPWK*GRAPCG
Trigger: CCCACATGGGGCCCTACCCCACTTCCAGGGAGCACA...GTGGAGATGGCTTTGCGGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp GAGGGCCCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGACCCCGAAGAGAAACATaGAGACGAAGTCGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: EGPVLCGHCWAVASLGAGPRRET*RRSRPC
Trigger: GCACGGCCGACTTCGTCTTCATGTTTCTCTTCGGGG...TCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGGGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp AGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGGTCCCCACACCAGCATGGCCATaGGGGCCTGGCCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SSFLWGGARVEHRPAQVPTPAWP*GPGPGR
Trigger: TCTTCCTGGGCCAGGCCCTCATGGCCATGCTGGTGT...GGGGACCTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000476077.1
ENST00000628868.1
CDS-3UTR TCA 90 bp GGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGTGGGGGTCACGCAGGCCGAAGAAGTTaGCCCTCACCCGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GRMEAARSLLGLALGGGHAGRRS*PSPEGC
Trigger: GCAGCCCTCGGGTGAGGGTCAACTTCTTCGGCCTGC...GTGACCCCCACCCAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476077.1
ENST00000628868.1
CDS-3UTR TCA 90 bp TCCAGGAGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGGCAGGCCGAAGAAGTTaGCCCTCACCCGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SRSSFLWGGARVEHRPAQAGRRS*PSPEGC
Trigger: GCAGCCCTCGGGTGAGGGTCAACTTCTTCGGCCTGC...CTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476077.1
ENST00000628868.1
CDS-3UTR GCA 90 bp CCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGAGGGCTGATTCAGGTGGGCCCTTaGATGGGCCCAGCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: PVLCGHCWAVASLGAGGLIQVGP*MGPAFR
Trigger: CCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAAT...CAGCCCTCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GGCTGGGCCCTCACTCCTGACCGCCAGCTCACACCGCCGCAAAGCCATCTCCACCCCAGCACAGACTGCTaGCACCCTCAGCTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: GWALTPDRQLTPPQSHLHPSTDC*HPQLLA
Trigger: TGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGG...GTGGAGATGGCTTTGCGGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTGCCGCGAGCTCTCCTaGCGTCCCTGGGCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGCRELS*RPWAAL
Trigger: CAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCA...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR GCA 90 bp GGCTGGGCCCTCACTCCTGACCGCCAGCTCACACCGCCGCAAAGCCATCTCCACGGCCTCACCCTCCTCTaGCTCAGATTCCCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: GWALTPDRQLTPPQSHLHGLTLL*LRFPSG
Trigger: CCCACTTGGGAATCTGAGGCAGAGGAGGGTGAGGCC...GTGGAGATGGCTTTGCGGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp ATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGTGGGGGTCTGAGGAGCTCCAGCTaGACCGCGGCGGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: MGRMEAARSLLGLALGGGLRSSS*TAAVVR
Trigger: CCTCACCACCGCCGCGGTGCAGCTGGAGCTCCTCAG...ACCCCCACCCAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476077.1
ENST00000628868.1
CDS-3UTR CCA 90 bp GCCTCAGGAAGGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGTTTCTTTGCCCTCTGTaGGCACCCCTATCCTACCAC +
Preference number: 4 (lower is better)
Translates to: ASGRCRELSCRPWAALALFLCPL*APLSYH
Trigger: GTGGTAGGATAGGGGTGCCCACAGAGGGCAAAGAAA...CAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACCTTCCTGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGCACAGATCCGGGCACAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGAGGTGCCGGGAAGGCTaGGCCCTCACTCCTGACCGC +
Preference number: 4 (lower is better)
Translates to: GTDPGTDPSTDCCHPQLLRCREG*ALTPDR
Trigger: GCGGTCAGGAGTGAGGGCCCAGCCTTCCCGGCACCT...CAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTGTGCCCGGATCTGTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGTGCCGCGAGCTCTCCTGCCGTCCCTGGGCCGCCCTGGCTCTGCTGTGTCCAGCTGTGTCTCCACAACTaGGGGGATGGAAGGAACCTT +
Preference number: 4 (lower is better)
Translates to: GAASSPAVPGPPWLCCVQLCLHN*GDGRNL
Trigger: AAGGTTCCTTCCATCCCCCCAGTTGTGGAGACACAG...CTGGACACAGCAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp AGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGGTCCCCTGTGCTCCCTGGAAGTaGGGTAGGGCCCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: SSFLWGGARVEHRPAQVPCAPWK*GRAPCG
Trigger: CCCACATGGGGCCCTACCCCACTTCCAGGGAGCACA...GGGGACCTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGAGGTGCCGGGAAGGCTGGGCCCTCACTCCTGACCGCCAGCTCACACCGCCGCAATGGACACAGGATCTaGGAGGGCAGCAAACTGGCT +
Preference number: 4 (lower is better)
Translates to: GGAGKAGPSLLTASSHRRNGHRI*EGSKLA
Trigger: AGCCAGTTTGCTGCCCTCCCAGATCCTGTGTCCATT...GCGGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAGCCTTCCCGGCACCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGCCCTCACTCCTaGCCGCCAGCTCACACCGCC +
Preference number: 4 (lower is better)
Translates to: QVGVMGRMEAARSLLGLALGPHS*PPAHTA
Trigger: GGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAG...GGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGGTGGGCAGGTGGGGGTaGATGGGGCTCCGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELVGRWG*MGLRVA
Trigger: TGCTACCCGGAGCCCCATTCACCCCCACCTGCCCAC...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR TCA 90 bp GGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGCTCTGCAGGCCGAAGAAGTTaGCCCTCACCCGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GSAVSRWSGYCQLGPCCSAGRRS*PSPEGC
Trigger: GCAGCCCTCGGGTGAGGGTCAACTTCTTCGGCCTGC...AGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318109.12
CDS-3UTR GCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGAGACGAAGTCGGCCGTaGGGCCGCGGAAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELRRSRP*GRGRSP
Trigger: AGGGCTCCTTCCGCGGCCGCACGGCCGACTTCGTCT...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR GCA 90 bp GTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGCTGGGTGGGGGTCACTaGTGCGGGGGTGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: VGVMGRMEAARSLLGLALLGGGH*CGGGRW
Trigger: CCATCTGCCACCCCCGCAGCAGTGACCCCCACCCAG...CAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR GCA 90 bp GGCACAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGTGGCAGGTCCCATGCTaGCAGGGCAGGGCTAGGGTC +
Preference number: 4 (lower is better)
Translates to: GTDPSTDCCHPQLLAGPMWQVPC*QGRARV
Trigger: GACCCTAGCCCTGCCCTGGCAGCATGGGACCTGCCA...CATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GGCTGGGCCCTCACTCCTGACCGCCAGCTCACACCGCCGCAAAGCCATCTCCACGATCCCAGCACAGACTaGTGCCACCCTCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: GWALTPDRQLTPPQSHLHDPSTD*CHPQLL
Trigger: CAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATC...GTGGAGATGGCTTTGCGGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGCTGAGGAGCTCCAGCTaGACCGCGGCGGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELLRSSS*TAAVVR
Trigger: CCTCACCACCGCCGCGGTGCAGCTGGAGCTCCTCAG...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR GCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGCCCTCACCCGAGGGCTaGGGCGGCTCCACACGTACA +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELPSPEG*GGSTRT
Trigger: TGTACGTGTGGAGCCGCCGCAGCCCTCGGGTGAGGG...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR CCA 90 bp CCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGAGGGCTGACGAGCCTCCAGACCTaGAACTTCCGGAACACAAGG +
Preference number: 4 (lower is better)
Translates to: PVLCGHCWAVASLGAGGLTSLQT*NFRNTR
Trigger: CCTTGTGTTCCGGAAGTTCCAGGTCTGGAGGCTCGT...CAGCCCTCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318109.12
CDS-3UTR CCA 90 bp AGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGGTCCCCAGGAGCAGCTTTCTGTaGGGAGGGGCCCGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: SSFLWGGARVEHRPAQVPRSSFL*GGARVE
Trigger: CTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCCT...GGGGACCTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
CDS-3UTR CCA 90 bp GGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGTGGGGGTCACTGGCAGATGGGGTCCTaGCTGTTCCTCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GRMEAARSLLGLALGGGHWQMGS*LFLREG
Trigger: CCCCTCCCTGAGGAACAGCCAGGACCCCATCTGCCA...GTGACCCCCACCCAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
CDS-3UTR CCA 90 bp GAGGGCCCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGAGGGTCATGGGTAGGATaGAAGCTGCCAGAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: EGPVLCGHCWAVASLGAGGSWVG*KLPEAS
Trigger: AGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCC...TCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGGGCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCGCAGGGCCACCTGGCTaGGAGGTGCCGGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: QVGVMGRMEAARSLLGLAAGPPG*EVPGRL
Trigger: CAGCCTTCCCGGCACCTCCCAGCCAGGTGGCCCTGC...GGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGCTGGGCCCTCACTCCTGACCGCCAGCTCACACCGCCGCAAAGCCATCTCCACGGATGGAAGGAACCTTaGCTGCCTCACCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: GWALTPDRQLTPPQSHLHGWKEP*LPHPTG
Trigger: ACCTGTGGGGTGAGGCAGCCAAGGTTCCTTCCATCC...GTGGAGATGGCTTTGCGGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp AACTTCCCCGCTGACTGGCAGGTAGCAGAGGCCTATGGTGGGCAGGACTTGCCCGGCTGCTGTGCTCCCTaGAAGTGGGGTAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: NFPADWQVAEAYGGQDLPGCCAP*KWGRAP
Trigger: TGGGGCCCTACCCCACTTCCAGGGAGCACAGCAGCC...GGGCAAGTCCTGCCCACCATAGGCCTCTGCTACCTGCCAGTCAGCGGGGAAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp AACTTCCCCGCTGACTGGCAGGTAGCAGAGGCCTATGGTGGGCAGGACTTGCCCGGGCTGTCGCCAGCCTaGGTGCAGGAGGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: NFPADWQVAEAYGGQDLPGLSPA*VQEGCS
Trigger: AGAACAGCCCTCCTGCACCCAGGCTGGCGACAGCCC...GGGCAAGTCCTGCCCACCATAGGCCTCTGCTACCTGCCAGTCAGCGGGGAAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CCTGGGTGCAGGAGGGCTGTTCTAGCTCCAGTGGCACCCATAGCCAGGTCAGCTGGGCTGTCGCCAGCCTaGGTGCAGGAGGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: PGCRRAVLAPVAPIARSAGLSPA*VQEGCS
Trigger: AGAACAGCCCTCCTGCACCCAGGCTGGCGACAGCCC...AGCTGACCTGGCTATGGGTGCCACTGGAGCTAGAACAGCCCTCCTGCACCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCCTCTCCTGCCGTCCCTaGGCCGCCCTGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGLSCRP*AALALL
Trigger: CAGCAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAG...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR CCA 90 bp GGCACAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGCCTGCTCCCCTTGCTTaGCCTCAGGAAGGTGCCGCG +
Preference number: 4 (lower is better)
Translates to: GTDPSTDCCHPQLLAGPMPAPLA*PQEGAA
Trigger: CGCGGCACCTTCCTGAGGCCAAGCAAGGGGAGCAGG...CATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR CAA 72 bp GGAATAGCCCTCCCGGCCTGGTGCCAGCTCTTGGAGTaGACACGGTACAGGGAGGAGACACAGCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GIALPAWCQLLE*TRYREETQPRV
Trigger: GACCCTGGGCTGTGTCTCCTCCCTGTACCGTGTCAACTCCAAGAGCTGGCACCAGGCCGGGAGGGCTATTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGGCAGCGAGAAGCCCATaGGCGCCCAAGGCAGGAACG +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELAARSP*APKAGT
Trigger: CGTTCCTGCCTTGGGCGCTCATGGGCTTCTCGCTGC...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR TCA 90 bp GTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGCTGAGAGGCCACACTaGGTGAGGACGGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: VGVMGRMEAARSLLGLALAERPH*VRTGQA
Trigger: TGCCTGCCCCGTCCTCACTCAGTGTGGCCTCTCAGC...CAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp GGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGTGGGGGTCACCTGCCTGGCAACCTGTaGGCTCAAAGCTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GRMEAARSLLGLALGGGHLPGNL*AQSSAR
Trigger: CCTGGCAGAGCTTTGAGCTCACAGGTTGCCAGGCAG...GTGACCCCCACCCAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp GGCTGGGCCCTCACTCCTGACCGCCAGCTCACACCGCCGCAAAGCCATCTCCACTTGGTCGCTGAGATGTaGGAGGAGGGCTCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: GWALTPDRQLTPPQSHLHLVAEM*EEGSFE
Trigger: CTCAAAGGAGCCCTCCTCTCACATCTCAGCGACCAA...GTGGAGATGGCTTTGCGGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp GAGGGCCCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGAGCAGAGGCAGAGCTCTaGTTAGGGATTGGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: EGPVLCGHCWAVASLGAGAEAEL*LGIGVL
Trigger: AAGAACCCCAATCCCTAATCAGAGCTCTGCCTCTGC...TCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCGTGGGCAGGTGGGGGTaGATGGGGCTCCGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGVGRWG*MGLRVA
Trigger: TGCTACCCGGAGCCCCATTCACCCCCACCTGCCCAC...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR TCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGGCAGGCCGAAGAAGTTaGCCCTCACCCGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELAGRRS*PSPEGC
Trigger: GCAGCCCTCGGGTGAGGGTCAACTTCTTCGGCCTGC...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR TCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGGGGGCCTTGCTGCTCTaGAGTCCCAGGAAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELGALLL*SPRKPG
Trigger: CCCTGGCTTCCTGGGACTTCAGAGCAGCAAGGCCCC...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406855.7
ENST00000620697.3
CDS-3UTR GCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGGTCACCGCCGGCACCTaGAGGAACTCGGCCGCTAGT +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELVTAGT*RNSAAS
Trigger: ACTAGCGGCCGAGTTCCTGCAGGTGCCGGCGGTGAC...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR GCA 90 bp ATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGTGGGGGTGGTGAGGACACAGGCTaGGGTGTAAGCCCGCGTCAC +
Preference number: 4 (lower is better)
Translates to: MGRMEAARSLLGLALGGGGEDTG*GVSPRH
Trigger: GTGACGCGGGCTTACACCGCAGCCTGTGTCCTCACC...ACCCCCACCCAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
CDS-3UTR GCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCAGACGAAGTCGGCCGTaGGGCCGCGGAAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGRRSRP*GRGRSP
Trigger: AGGGCTCCTTCCGCGGCCGCACGGCCGACTTCGTCT...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR GCA 90 bp CAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGAGGAGCTCCAGCTaGACCGCGGCGGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: QVGVMGRMEAARSLLGLALRSSS*TAAVVR
Trigger: CCTCACCACCGCCGCGGTGCAGCTGGAGCTCCTCAG...GGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR GCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCCCCTCACCCGAGGGCTaGGGCGGCTCCACACGTACA +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGPSPEG*GGSTRT
Trigger: TGTACGTGTGGAGCCGCCGCAGCCCTCGGGTGAGGG...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR CCA 90 bp ATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGTGGGGGTGCAGGTCCACGAGGATaGAGTTGCCCAGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: MGRMEAARSLLGLALGGGAGPRG*SCPAAA
Trigger: CGCTGCTGCTGGGCAACTCCATCCTCGTGGACCTGC...ACCCCCACCCAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476077.1
ENST00000628868.1
CDS-3UTR CCA 90 bp TCCAGGAGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGCTCTTGCCTCCAGGCTaGTTGGGGAAGACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SRSSFLWGGARVEHRPAQLLPPG*LGKTSS
Trigger: GGAGGACGTCTTCCCCAACCAGCCTGGAGGCAAGAG...CTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
CDS-3UTR CCA 90 bp TCCAGGAGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGAGGTGGGCCCTTGCATaGGCCCAGCCTTTAGGATGG +
Preference number: 4 (lower is better)
Translates to: SRSSFLWGGARVEHRPAQRWALA*AQPLGW
Trigger: CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCT...CTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
CDS-3UTR CCA 90 bp AACTTCCCCGCTGACTGGCAGGTAGCAGAGGCCTATGGTGGGCAGGACTTGCCCTGCCCAAGGCCCTGGTaGGGCCAGGATGAGAACCCT +
Preference number: 4 (lower is better)
Translates to: NFPADWQVAEAYGGQDLPCPRPW*GQDENP
Trigger: AGGGTTCTCATCCTGGCCCCACCAGGGCCTTGGGCA...GGGCAAGTCCTGCCCACCATAGGCCTCTGCTACCTGCCAGTCAGCGGGGAAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGAGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGGTCCGGTAGCAGAGGCCTATaGTGGGCAGGACTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: GAAFCGEGPVLSTGQHRSGSRGL*WAGLAQ
Trigger: TTGGGCAAGTCCTGCCCACCATAGGCCTCTGCTACC...GGACCTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCAGGTGCCGGGAAGGCTaGGCCCTCACTCCTGACCGC +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGRCREG*ALTPDR
Trigger: GCGGTCAGGAGTGAGGGCCCAGCCTTCCCGGCACCT...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCCCTTCGGGCAGGGCCACCTaGCTGGGAGGTGCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: HMLAWDSSQGVCTQGLCPSGRAT*LGGAGK
Trigger: CTTCCCGGCACCTCCCAGCCAGGTGGCCCTGCCCGA...AGGGCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGAGGGCTGCCCCATTCTTCAGAATaGACACAGGATCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PVLCGHCWAVASLGAGGLPHSSE*TQDLGG
Trigger: CCCTCCCAGATCCTGTGTCCATTCTGAAGAATGGGG...CAGCCCTCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGTGGGGGTCACCAGGCTACTGCCAGCTaGGGCCTTGCTGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: GRMEAARSLLGLALGGGHQATAS*GLAALK
Trigger: CTTCAGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTG...GTGACCCCCACCCAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCCTCTCCTGCCGTCCCTaGGCCGCCCTGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLLSCRP*AALALL
Trigger: CAGCAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAG...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR CCA 90 bp ACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCCCTCCATCAAAGAGTGGAACGGGGCGGCCTCACCTaGAACACCGCGGCGGTGGTG +
Preference number: 4 (lower is better)
Translates to: TLPREFALRASALHQRVERGGLT*NTAAVV
Trigger: CACCACCGCCGCGGTGTTCCAGGTGAGGCCGCCCCG...TTCCACTCTTTGATGGAGGGCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp ACCACTGGCAGGAACATCTGTAGGCTGGTTTGGCACAACCTAGGAGACGCCTGTCAGGTGCGGGGTGGGTaGGTCGGGCCCACAGGTGCG +
Preference number: 4 (lower is better)
Translates to: TTGRNICRLVWHNLGDACQVRGG*VGPTGA
Trigger: CGCACCTGTGGGCCCGACCCACCCACCCCGCACCTG...ACAGGCGTCTCCTAGGTTGTGCCAAACCAGCCTACAGATGTTCCTGCCAGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp TCCAGGAGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGTCCCTGCCACGCCATTaGACCTTCTCAAGCACGCGT +
Preference number: 4 (lower is better)
Translates to: SRSSFLWGGARVEHRPAQSLPRH*TFSSTR
Trigger: ACGCGTGCTTGAGAAGGTTCAATGGCGTGGCAGGGA...CTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476077.1
ENST00000628868.1
CDS-3UTR TCA 90 bp TCCAGGAGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGCCCCGAAGAGAAACATaGAGACGAAGTCGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: SRSSFLWGGARVEHRPAQPRRET*RRSRPC
Trigger: GCACGGCCGACTTCGTCTTCATGTTTCTCTTCGGGG...CTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
CDS-3UTR TCA 90 bp CAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCGCAGCGAGAAGCCCATaGGCGCCCAAGGCAGGAACG +
Preference number: 4 (lower is better)
Translates to: QVGVMGRMEAARSLLGLAAARSP*APKAGT
Trigger: CGTTCCTGCCTTGGGCGCTCATGGGCTTCTCGCTGC...GGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR TCA 90 bp CTCCCGGCCTGGTGCCAGCTCTTGGAGTTGACACGGTACAGGGAGGAGACACAGCACCTGCAGTTGGGCTaGGAGGCCACACTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: LPAWCQLLELTRYREETQHLQLG*EATLSE
Trigger: CTCACTCAGTGTGGCCTCTCAGCCCAACTGCAGGTG...CTGTGTCTCCTCCCTGTACCGTGTCAACTCCAAGAGCTGGCACCAGGCCGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CCTGGGTGCAGGAGGGCTGTTCTAGCTCCAGTGGCACCCATAGCCAGGTCAGCTCTGCCTGGCAACCTGTaGGCTCAAAGCTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PGCRRAVLAPVAPIARSALPGNL*AQSSAR
Trigger: CCTGGCAGAGCTTTGAGCTCACAGGTTGCCAGGCAG...AGCTGACCTGGCTATGGGTGCCACTGGAGCTAGAACAGCCCTCCTGCACCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp GGAGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGGTCCGAGGCCCCGTGCCACTaGGCATCCAGAAATAAACCA +
Preference number: 4 (lower is better)
Translates to: GAAFCGEGPVLSTGQHRSEAPCH*ASRNKP
Trigger: TGGTTTATTTCTGGATGCTCAGTGGCACGGGGCCTC...GGACCTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CATCAGCCTGAAGGCACCACTGGCAGGAACATCTGTAGGCTGGTTTGGCACAACCTGGGCCCTCACTCCTaGCCGCCAGCTCACACCGCC +
Preference number: 4 (lower is better)
Translates to: HQPEGTTGRNICRLVWHNLGPHS*PPAHTA
Trigger: GGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAG...GTTGTGCCAAACCAGCCTACAGATGTTCCTGCCAGTGGTGCCTTCAGGCTGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGACACCAGCATGGCCATaGGGGCCTGGCCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELTPAWP*GPGPGR
Trigger: TCTTCCTGGGCCAGGCCCTCATGGCCATGCTGGTGT...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR TCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCGCAGGCCGAAGAAGTTaGCCCTCACCCGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGAGRRS*PSPEGC
Trigger: GCAGCCCTCGGGTGAGGGTCAACTTCTTCGGCCTGC...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR TCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCGGGGCCTTGCTGCTCTaGAGTCCCAGGAAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGGALLL*SPRKPG
Trigger: CCCTGGCTTCCTGGGACTTCAGAGCAGCAAGGCCCC...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406855.7
ENST00000620697.3
CDS-3UTR TCA 90 bp AGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGGTCCCCAGAAGAGGAAGTTGGTaGCGAGCCTCCAGACCTACG +
Preference number: 4 (lower is better)
Translates to: SSFLWGGARVEHRPAQVPRRGSW*RASRPT
Trigger: CGTAGGTCTGGAGGCTCGTCACCAACTTCCTCTTCT...GGGGACCTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp CTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCGTCACCGCCGGCACCTaGAGGAACTCGGCCGCTAGT +
Preference number: 4 (lower is better)
Translates to: LPQVGVMGRMEAARSLLGVTAGT*RNSAAS
Trigger: ACTAGCGGCCGAGTTCCTGCAGGTGCCGGCGGTGAC...GCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR GCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCCTGGGTGGGGGTCACTaGTGCGGGGGTGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLLGGGH*CGGGRW
Trigger: CCATCTGCCACCCCCGCAGCAGTGACCCCCACCCAG...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp CCCTGGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGATTCAGGTGGGCCCTTaGATGGGCCCAGCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: PWLCCVQMVRLLPAGALLIQVGP*MGPAFR
Trigger: CCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAAT...CAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GGCACAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGCCCAGCACAGACTGCTaGCACCCTCAGCTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: GTDPSTDCCHPQLLAGPMPSTDC*HPQLLA
Trigger: TGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGG...CATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp CCCTGGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGGTCCCTTCCCAGCCCTaGCTCCAAGGAGTTCATGTC +
Preference number: 4 (lower is better)
Translates to: PWLCCVQMVRLLPAGALLVPSQP*LQGVHV
Trigger: GACATGAACTCCTTGGAGGCAGGGCTGGGAAGGGAC...CAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGTGCCAGCTGGGGCCTTaGTGCTCTGAAGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: VGVMGRMEAARSLLGLALCQLGP*CSEVPC
Trigger: GCAGGGGACTTCAGAGCAGCAAGGCCCCAGCTGGCA...CAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGTTGGCCTCAGGAAGGTaGCGCGAGCTCTCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: VGVMGRMEAARSLLGLALLASGR*RELSCR
Trigger: ACGGCAGGAGAGCTCGCGGCACCTTCCTGAGGCCAA...CAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGTTGGCCTCAGGAAGGTaGCGCGAGCTCTCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELLASGR*RELSCR
Trigger: ACGGCAGGAGAGCTCGCGGCACCTTCCTGAGGCCAA...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR GCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCCTGAGGAGCTCCAGCTaGACCGCGGCGGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLLRSSS*TAAVVR
Trigger: CCTCACCACCGCCGCGGTGCAGCTGGAGCTCCTCAG...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR CCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGGCAGGTCCACGAGGATaGAGTTGCCCAGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELAGPRG*SCPAAA
Trigger: CGCTGCTGCTGGGCAACTCCATCCTCGTGGACCTGC...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR CCA 90 bp GTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGCAGGTCCACGAGGATaGAGTTGCCCAGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: VGVMGRMEAARSLLGLALAGPRG*SCPAAA
Trigger: CGCTGCTGCTGGGCAACTCCATCCTCGTGGACCTGC...CAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp ATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGTGGGGGTTGCCTCCAGGCTGGTTaGGGAAGACGTCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: MGRMEAARSLLGLALGGGCLQAG*GRRPPG
Trigger: TCCTGGAGGACGTCTTCCCCAACCAGCCTGGAGGCA...ACCCCCACCCAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
CDS-3UTR CCA 90 bp CAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGCTGCAGGAGCAGCTTTCTGTaGGGAGGGGCCCGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: QIPAQTAATLSCWQVPCCRSSFL*GGARVE
Trigger: CTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCCT...GCAGCATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCACTGCTGCGGGGGTaGCAGATGGGGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGSLLRG*QMGSWL
Trigger: CAGCCAGGACCCCATCTGCCACCCCCGCAGCAGTGA...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp TGCAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGAAGGCCTGGCCCTGGGTaGGGGTCACTGCTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: CSSFCLFRWALAWAQPLGRPGPG*GSLLRG
Trigger: CCCCCGCAGCAGTGACCCCCACCCAGGGCCAGGCCT...TCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp CAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGCTGCAGGTGGGCCCTTGCATaGGCCCAGCCTTTAGGATGG +
Preference number: 4 (lower is better)
Translates to: QIPAQTAATLSCWQVPCCRWALA*AQPLGW
Trigger: CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCT...GCAGCATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGCTCTGGGAAGCCAGTGCTGTaGGCCAAGAGACTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GSAVSRWSGYCQLGPCCSGKPVL*AKRLQL
Trigger: GAGCTGCAGTCTCTTGGCCCACAGCACTGGCTTCCC...AGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CCTGGGTGCAGGAGGGCTGTTCTAGCTCCAGTGGCACCCATAGCCAGGTCAGCTGGGAAGCCAGTGCTGTaGGCCAAGAGACTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PGCRRAVLAPVAPIARSAGKPVL*AKRLQL
Trigger: GAGCTGCAGTCTCTTGGCCCACAGCACTGGCTTCCC...AGCTGACCTGGCTATGGGTGCCACTGGAGCTAGAACAGCCCTCCTGCACCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GAGGGCCCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGACTCAAAAGCTCTGCCTaGCAACCTGTGAGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: EGPVLCGHCWAVASLGAGLKSSA*QPVSSK
Trigger: CTTTGAGCTCACAGGTTGCCAGGCAGAGCTTTTGAG...TCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CTCCCGGCCTGGTGCCAGCTCTTGGAGTTGACACGGTACAGGGAGGAGACACAGACTTGCCCAAGGCCCTaGTGGGGCCAGGATGAGAAC +
Preference number: 4 (lower is better)
Translates to: LPAWCQLLELTRYREETQTCPRP*WGQDEN
Trigger: GTTCTCATCCTGGCCCCACCAGGGCCTTGGGCAAGT...CTGTGTCTCCTCCCTGTACCGTGTCAACTCCAAGAGCTGGCACCAGGCCGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGCACAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGAGGAGACGCCTGTCCTaGCCCCAGCAGCCGAAATCT +
Preference number: 4 (lower is better)
Translates to: GTDPSTDCCHPQLLAGPMRRRLS*PQQPKS
Trigger: AGATTTCGGCTGCTGGGGCCAGGACAGGCGTCTCCT...CATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGCTGGGCCCTCACTCCTGACCGCCAGCTCACACCGCCGCAAAGCCATCTCCACCTGTGTCTCCACAACTaGGGGGATGGAAGGAACCTT +
Preference number: 4 (lower is better)
Translates to: GWALTPDRQLTPPQSHLHLCLHN*GDGRNL
Trigger: AAGGTTCCTTCCATCCCCCCAGTTGTGGAGACACAG...GTGGAGATGGCTTTGCGGCGGTGTGAGCTGGCGGTCAGGAGTGAGGGCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CCCTGGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGCAGCAAGGGGACAGCTaGGCCTTACTGGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: PWLCCVQMVRLLPAGALLQQGDS*ALLEGL
Trigger: AAGGCCTTCCAGTAAGGCCCAGCTGTCCCCTTGCTG...CAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCGGCTGCTGTGCTCCCTaGAAGTGGGGTAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: QVGVMGRMEAARSLLGLAGCCAP*KWGRAP
Trigger: TGGGGCCCTACCCCACTTCCAGGGAGCACAGCAGCC...GGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGGCTGCTGTGCTCCCTaGAAGTGGGGTAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PQVGVMGRMEAARSLLGLGCCAP*KWGRAP
Trigger: TGGGGCCCTACCCCACTTCCAGGGAGCACAGCAGCC...CAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGCATAGCCAGGTCAGCTaGGGCCCTTTCCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: VGVMGRMEAARSLLGLALHSQVS*GPFPPQ
Trigger: CTGGGGTGGGAAAGGGCCCCAGCTGACCTGGCTATG...CAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGAGGTGTCCCCATTCTTCAGAATGGACACAGGATCTGGGAGGGCAGCAAACTGCTCTCCTGCCGTCCCTaGGCCGCCCTGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GGVPILQNGHRIWEGSKLLSCRP*AALALL
Trigger: CAGCAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAG...CAGTTTGCTGCCCTCCCAGATCCTGTGTCCATTCTGAAGAATGGGGACACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCCCTGCTCCCCTTGCTTaGCCTCAGGAAGGTGCCGCG +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGPAPLA*PQEGAA
Trigger: CGCGGCACCTTCCTGAGGCCAAGCAAGGGGAGCAGG...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR CCA 90 bp CTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTCAGGTGCGGGGTGGGTaGGTCGGGCCCACAGGTGCG +
Preference number: 4 (lower is better)
Translates to: LILFIQVGPCMGPAFRMGQVRGG*VGPTGA
Trigger: CGCACCTGTGGGCCCGACCCACCCACCCCGCACCTG...ACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGCGGTCAGGTGCGGGGTaGGTGGGTCGGGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: QLILFIQVGPCMGPAFRMRSGAG*VGRAHR
Trigger: CCTGTGGGCCCGACCCACCCACCCCGCACCTGACCG...CATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp ATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGTGGGGGTCCCCGAAGAGAAACATaGAGACGAAGTCGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: MGRMEAARSLLGLALGGGPRRET*RRSRPC
Trigger: GCACGGCCGACTTCGTCTTCATGTTTCTCTTCGGGG...ACCCCCACCCAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
CDS-3UTR TCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCGCAGCGAGAAGCCCATaGGCGCCCAAGGCAGGAACG +
Preference number: 4 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLAARSP*APKAGT
Trigger: CGTTCCTGCCTTGGGCGCTCATGGGCTTCTCGCTGC...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR TCA 90 bp AACTTCCCCGCTGACTGGCAGGTAGCAGAGGCCTATGGTGGGCAGGACTTGCCCGCCCTCTTCTGCACCTaGATCCATGGGGCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: NFPADWQVAEAYGGQDLPALFCT*IHGALA
Trigger: TGCCAAAGCCCCATGGATTCAGGTGCAGAAGAGGGC...GGGCAAGTCCTGCCCACCATAGGCCTCTGCTACCTGCCAGTCAGCGGGGAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp AGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGGTCCCCGACGAAGGTGGTATGTaGACAAGGTTGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: SSFLWGGARVEHRPAQVPDEGGM*TRLAHR
Trigger: CCTGTGTGCCAACCTTGTTCACATACCACCTTCGTC...GGGGACCTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCGTCACCGCCGGCACCTaGAGGAACTCGGCCGCTAGT +
Preference number: 4 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLVTAGT*RNSAAS
Trigger: ACTAGCGGCCGAGTTCCTGCAGGTGCCGGCGGTGAC...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR GCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCGGTGAGGACACAGGCTaGGGTGTAAGCCCGCGTCAC +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGGEDTG*GVSPRH
Trigger: GTGACGCGGGCTTACACCGCAGCCTGTGTCCTCACC...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR GCA 90 bp CCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGGTGAGGACACAGGCTaGGGTGTAAGCCCGCGTCAC +
Preference number: 4 (lower is better)
Translates to: PQVGVMGRMEAARSLLGLGEDTG*GVSPRH
Trigger: GTGACGCGGGCTTACACCGCAGCCTGTGTCCTCACC...CAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR GCA 90 bp ATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGTGGGGGTATTCAGGTGGGCCCTTaGATGGGCCCAGCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: MGRMEAARSLLGLALGGGIQVGP*MGPAFR
Trigger: CCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAAT...ACCCCCACCCAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
CDS-3UTR GCA 90 bp GGCACAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGCCCTATCCTACCACCTaGAGTTGGGCTGAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GTDPSTDCCHPQLLAGPMPYPTT*SWAERP
Trigger: TGGCCTCTCAGCCCAACTGCAGGTGGTAGGATAGGG...CATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp CTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCTGCCAGCTGGGGCCTTaGTGCTCTGAAGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LPQVGVMGRMEAARSLLGCQLGP*CSEVPC
Trigger: GCAGGGGACTTCAGAGCAGCAAGGCCCCAGCTGGCA...GCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GTTACCATGAAAATGACAACCTGTCTTTGGAGGAGGCCCCGTGCCACTGAGCATTGCCGCGAGCTCTCCTaGCGTCCCTGGGCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: VTMKMTTCLWRRPRATEHCRELS*RPWAAL
Trigger: CAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCA...ATGCTCAGTGGCACGGGGCCTCCTCCAAAGACAGGTTGTCATTTTCATGGTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp CAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCTTGGCCTCAGGAAGGTaGCGCGAGCTCTCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: QVGVMGRMEAARSLLGLALASGR*RELSCR
Trigger: ACGGCAGGAGAGCTCGCGGCACCTTCCTGAGGCCAA...GGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTTGGCCTCAGGAAGGTaGCGCGAGCTCTCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGLASGR*RELSCR
Trigger: ACGGCAGGAGAGCTCGCGGCACCTTCCTGAGGCCAA...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR GCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGGGCCTCACCCTCCTCTaGCTCAGATTCCCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELGLTLL*LRFPSG
Trigger: CCCACTTGGGAATCTGAGGCAGAGGAGGGTGAGGCC...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR GCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGCAGCTGGGGCCTTGCTaGTCTGAAGTCCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELQLGPC*SEVPGS
Trigger: GCTTCCTGGGACTTCAGAGCAGCAAGGCCCCAGCTG...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406855.7
ENST00000620697.3
CDS-3UTR CCA 90 bp GTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGCTCTTGCCTCCAGGCTaGTTGGGGAAGACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: VGVMGRMEAARSLLGLALLLPPG*LGKTSS
Trigger: GGAGGACGTCTTCCCCAACCAGCCTGGAGGCAAGAG...CAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp GGCACAGATCCGGGCACAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGGAGGGGCAGGTAATTaGGGTCTTCTGCAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: GTDPGTDPSTDCCHPQLLGGAGN*GLLQGH
Trigger: ATGCCCCTGCAGAAGACCCCAATTACCTGCCCCTCC...CAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTGTGCCCGGATCTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCTGGCAGATGGGGTCCTaGCTGTTCCTCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QVGVMGRMEAARSLLGLAWQMGS*LFLREG
Trigger: CCCCTCCCTGAGGAACAGCCAGGACCCCATCTGCCA...GGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp GGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGCTCTGGTAGCAGAGGCCTATaGTGGGCAGGACTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: GSAVSRWSGYCQLGPCCSGSRGL*WAGLAQ
Trigger: TTGGGCAAGTCCTGCCCACCATAGGCCTCTGCTACC...AGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGTGGGGGTCACCAGGAGAGGCTAGATTaGCATCAGCCTGAAGGCACC +
Preference number: 4 (lower is better)
Translates to: GRMEAARSLLGLALGGGHQERLD*HQPEGT
Trigger: GGTGCCTTCAGGCTGATGCCAATCTAGCCTCTCCTG...GTGACCCCCACCCAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGCACAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGGCCCACCTGTCAGGGTaGCTGATGAGAGACAGGAGA +
Preference number: 4 (lower is better)
Translates to: GTDPSTDCCHPQLLAGPMAHLSG*LMRDRR
Trigger: TCTCCTGTCTCTCATCAGCCACCCTGACAGGTGGGC...CATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp AGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGCAGGGCCACCTGGCTaGGAGGTGCCGGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SSFCLFRWALAWAQPLGWAGPPG*EVPGRL
Trigger: CAGCCTTCCCGGCACCTCCCAGCCAGGTGGCCCTGC...CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGCTGCGGATGGAAGGAACCTTaGCTGCCTCACCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: QIPAQTAATLSCWQVPCCGWKEP*LPHPTG
Trigger: ACCTGTGGGGTGAGGCAGCCAAGGTTCCTTCCATCC...GCAGCATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGAGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGGTCCCTGTGTCTCCACAACTaGGGGGATGGAAGGAACCTT +
Preference number: 4 (lower is better)
Translates to: GAAFCGEGPVLSTGQHRSLCLHN*GDGRNL
Trigger: AAGGTTCCTTCCATCCCCCCAGTTGTGGAGACACAG...GGACCTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp AGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGGTCCCCACAGCTGGGCCTTACTaGAAGGCCTTGAACAAAGGG +
Preference number: 4 (lower is better)
Translates to: SSFLWGGARVEHRPAQVPTAGPY*KALNKG
Trigger: CCCTTTGTTCAAGGCCTTCCAGTAAGGCCCAGCTGT...GGGGACCTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGAGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGGTCCCCCCATTCTTCAGAATaGACACAGGATCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GAAFCGEGPVLSTGQHRSPHSSE*TQDLGG
Trigger: CCCTCCCAGATCCTGTGTCCATTCTGAAGAATGGGG...GGACCTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGCAGGCTACTGCCAGCTaGGGCCTTGCTGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELQATAS*GLAALK
Trigger: CTTCAGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTG...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR CCA 90 bp TTTGAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCCTCTCCTGCCGTCCCTaGGCCGCCCTGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: FEHMLAWDSSQGVCTQGLLSCRP*AALALL
Trigger: CAGCAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAG...GAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCCCTGCTCCCCTTGCTTaGCCTCAGGAAGGTGCCGCG +
Preference number: 4 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLPAPLA*PQEGAA
Trigger: CGCGGCACCTTCCTGAGGCCAAGCAAGGGGAGCAGG...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR CCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGGGCAGGAACGGTGCCTaGAAAGTGAGCAGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELGRNGA*KVSRPK
Trigger: CTTCGGCCTGCTCACTTTCCAGGCACCGTTCCTGCC...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR TCA 90 bp GTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGTCCCTGCCACGCCATTaGACCTTCTCAAGCACGCGT +
Preference number: 4 (lower is better)
Translates to: VGVMGRMEAARSLLGLALSLPRH*TFSSTR
Trigger: ACGCGTGCTTGAGAAGGTTCAATGGCGTGGCAGGGA...CAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476077.1
ENST00000628868.1
CDS-3UTR TCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGCCCCGAAGAGAAACATaGAGACGAAGTCGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELPRRET*RRSRPC
Trigger: GCACGGCCGACTTCGTCTTCATGTTTCTCTTCGGGG...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR TCA 90 bp GAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCGGTGAACTTCCCCGCTaGCTGGCAGGTAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: EHMLAWDSSQGVCTQGLCGELPR*LAGSRG
Trigger: GCCTCTGCTACCTGCCAGTCAGCGGGGAAGTTCACC...GCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp GGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGCTCTGAGGCCCCGTGCCACTaGGCATCCAGAAATAAACCA +
Preference number: 4 (lower is better)
Translates to: GSAVSRWSGYCQLGPCCSEAPCH*ASRNKP
Trigger: TGGTTTATTTCTGGATGCTCAGTGGCACGGGGCCTC...AGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp GGCACAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGGAGGCCCCGTGCCACTaGGCATCCAGAAATAAACCA +
Preference number: 4 (lower is better)
Translates to: GTDPSTDCCHPQLLAGPMEAPCH*ASRNKP
Trigger: TGGTTTATTTCTGGATGCTCAGTGGCACGGGGCCTC...CATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGTCGGCAATGAAAGGGTaGGGCAGCCCTGTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELSAMKG*GSPVSP
Trigger: TGGAGACACAGGGCTGCCTCACCCTTTCATTGCCGA...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGGCCAGCTCTTGGAGTTaGCACGGTACAGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELASSWS*HGTGRR
Trigger: TCTCCTCCCTGTACCGTGTCAACTCCAAGAGCTGGC...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp TGCAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGAGTGGGCAGGTGGGGGTaGATGGGGCTCCGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: CSSFCLFRWALAWAQPLGVGRWG*MGLRVA
Trigger: TGCTACCCGGAGCCCCATTCACCCCCACCTGCCCAC...TCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCACACCAGCATGGCCATaGGGGCCTGGCCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLTPAWP*GPGPGR
Trigger: TCTTCCTGGGCCAGGCCCTCATGGCCATGCTGGTGT...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR TCA 90 bp GGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGCTCTAGAAGAGGAAGTTGGTaGCGAGCCTCCAGACCTACG +
Preference number: 4 (lower is better)
Translates to: GSAVSRWSGYCQLGPCCSRRGSW*RASRPT
Trigger: CGTAGGTCTGGAGGCTCGTCACCAACTTCCTCTTCT...AGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGTCGGCCGCTAGTCCCTaGCACGCCATTGAACCTTCT +
Preference number: 4 (lower is better)
Translates to: VGVMGRMEAARSLLGLALSAASP*HAIEPS
Trigger: AGAAGGTTCAATGGCGTGGCAGGGACTAGCGGCCGA...CAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR GCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCGGTGAGGACACAGGCTaGGGTGTAAGCCCGCGTCAC +
Preference number: 4 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLGEDTG*GVSPRH
Trigger: GTGACGCGGGCTTACACCGCAGCCTGTGTCCTCACC...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR GCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGAGCCCTCTTCCAGCATaGGGCAGTAGCGGAACACGA +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELSPLPA*GSSGTR
Trigger: TCGTGTTCCGCTACTGCCGCATGCTGGAAGAGGGCT...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR GCA 90 bp AGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGAGACGAAGTCGGCCGTaGGGCCGCGGAAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SSFCLFRWALAWAQPLGWRRSRP*GRGRSP
Trigger: AGGGCTCCTTCCGCGGCCGCACGGCCGACTTCGTCT...CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR GCA 90 bp TTTGAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCAGACGAAGTCGGCCGTaGGGCCGCGGAAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: FEHMLAWDSSQGVCTQGLRRSRP*GRGRSP
Trigger: AGGGCTCCTTCCGCGGCCGCACGGCCGACTTCGTCT...GAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp TGCAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGACTGGGTGGGGGTCACTaGTGCGGGGGTGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: CSSFCLFRWALAWAQPLGLGGGH*CGGGRW
Trigger: CCATCTGCCACCCCCGCAGCAGTGACCCCCACCCAG...TCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR GCA 90 bp AGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGCTGGGTGGGGGTCACTaGTGCGGGGGTGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: SSFCLFRWALAWAQPLGWLGGGH*CGGGRW
Trigger: CCATCTGCCACCCCCGCAGCAGTGACCCCCACCCAG...CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR GCA 90 bp GGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGCTCTGTGAGCTCAAAGCTCTaGCAGGCAACCATGGGCAGT +
Preference number: 4 (lower is better)
Translates to: GSAVSRWSGYCQLGPCCSVSSKL*QATMGS
Trigger: ACTGCCCATGGTTGCCTGGCAGAGCTTTGAGCTCAC...AGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCGCTAGGGTCAGAGGCTaGTGTGCTCCCTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGARVRG*CAPWKW
Trigger: CCACTTCCAGGGAGCACAGCAGCCTCTGACCCTAGC...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp ACCACTGGCAGGAACATCTGTAGGCTGGTTTGGCACAACCTAGGAGACGCCTGTGTCCTGTGTGGGCACTaGTGGGCTGTCGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TTGRNICRLVWHNLGDACVLCGH*WAVASL
Trigger: CAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGAC...ACAGGCGTCTCCTAGGTTGTGCCAAACCAGCCTACAGATGTTCCTGCCAGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp CAAGGGGACAGCTGGGCCTTACTGGAAGGCCTTGAACAAAGGGGAAGATTCCCAGTCCTGTGTGGGCACTaGTGGGCTGTCGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: QGDSWALLEGLEQRGRFPVLCGH*WAVASL
Trigger: CAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGAC...TGGGAATCTTCCCCTTTGTTCAAGGCCTTCCAGTAAGGCCCAGCTGTCCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGCTCTGGGCAAGAGGCTCTCTaGCTTTCAGGAACAGCCCTA +
Preference number: 4 (lower is better)
Translates to: GSAVSRWSGYCQLGPCCSGQEAL*LSGTAL
Trigger: TAGGGCTGTTCCTGAAAGGCAGAGAGCCTCTTGCCC...AGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCGGCCTCACCCTCCTCTaGCTCAGATTCCCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGGLTLL*LRFPSG
Trigger: CCCACTTGGGAATCTGAGGCAGAGGAGGGTGAGGCC...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR GCA 90 bp TTTCTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTACTGAGGAGCTCCAGCTaGACCGCGGCGGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: FLPQVGVMGRMEAARSLLLRSSS*TAAVVR
Trigger: CCTCACCACCGCCGCGGTGCAGCTGGAGCTCCTCAG...TAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR GCA 90 bp CTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTCCCTCACCCGAGGGCTaGGGCGGCTCCACACGTACA +
Preference number: 4 (lower is better)
Translates to: LILFIQVGPCMGPAFRMGPSPEG*GGSTRT
Trigger: TGTACGTGTGGAGCCGCCGCAGCCCTCGGGTGAGGG...ACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCGCAGGTCCACGAGGATaGAGTTGCCCAGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLAGPRG*SCPAAA
Trigger: CGCTGCTGCTGGGCAACTCCATCCTCGTGGACCTGC...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR CCA 90 bp CAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCTGCCTCCAGGCTGGTTaGGGAAGACGTCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QVGVMGRMEAARSLLGLACLQAG*GRRPPG
Trigger: TCCTGGAGGACGTCTTCCCCAACCAGCCTGGAGGCA...GGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp CTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTCTTGCCTCCAGGCTaGTTGGGGAAGACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LPQVGVMGRMEAARSLLGLLPPG*LGKTSS
Trigger: GGAGGACGTCTTCCCCAACCAGCCTGGAGGCAAGAG...GCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCCTCTTGCCTCCAGGCTaGTTGGGGAAGACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGLLPPG*LGKTSS
Trigger: GGAGGACGTCTTCCCCAACCAGCCTGGAGGCAAGAG...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR CCA 90 bp GTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGAGGGGCAGGTAATTaGGGTCTTCTGCAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: VGVMGRMEAARSLLGLALGGAGN*GLLQGH
Trigger: ATGCCCCTGCAGAAGACCCCAATTACCTGCCCCTCC...CAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp ACCACTGGCAGGAACATCTGTAGGCTGGTTTGGCACAACCTAGGAGACGCCTGTTCACTGCTGCGGGGGTaGCAGATGGGGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TTGRNICRLVWHNLGDACSLLRG*QMGSWL
Trigger: CAGCCAGGACCCCATCTGCCACCCCCGCAGCAGTGA...ACAGGCGTCTCCTAGGTTGTGCCAAACCAGCCTACAGATGTTCCTGCCAGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGAGGTGGGCCCTTGCATaGGCCCAGCCTTTAGGATGG +
Preference number: 4 (lower is better)
Translates to: PQVGVMGRMEAARSLLGLRWALA*AQPLGW
Trigger: CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCT...CAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp CTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCAGGTGGGCCCTTGCATaGGCCCAGCCTTTAGGATGG +
Preference number: 4 (lower is better)
Translates to: LPQVGVMGRMEAARSLLGRWALA*AQPLGW
Trigger: CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCT...GCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp TCCAGGAGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGTTTCTTTGCCCTCTGTaGGCACCCCTATCCTACCAC +
Preference number: 4 (lower is better)
Translates to: SRSSFLWGGARVEHRPAQFLCPL*APLSYH
Trigger: GTGGTAGGATAGGGGTGCCCACAGAGGGCAAAGAAA...CTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CCCTGGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGCTGCACCTGAATCCATaGGGCTTTGGCATCACCAGA +
Preference number: 4 (lower is better)
Translates to: PWLCCVQMVRLLPAGALLLHLNP*GFGITR
Trigger: TCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAG...CAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp AACTTCCCCGCTGACTGGCAGGTAGCAGAGGCCTATGGTGGGCAGGACTTGCCCATGACAACCTGTCTTTaGAGGAGGCCCCGTGCCACT +
Preference number: 4 (lower is better)
Translates to: NFPADWQVAEAYGGQDLPMTTCL*RRPRAT
Trigger: AGTGGCACGGGGCCTCCTCCAAAGACAGGTTGTCAT...GGGCAAGTCCTGCCCACCATAGGCCTCTGCTACCTGCCAGTCAGCGGGGAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGCTGCCATCTCCACAAGGTCTaGCTACAACACGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: QIPAQTAATLSCWQVPCCHLHKV*LQHGGQ
Trigger: CTGCCCTCCGTGTTGTAGCCAGACCTTGTGGAGATG...GCAGCATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp TTTCTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAAGGTGCCGGGAAGGCTaGGCCCTCACTCCTGACCGC +
Preference number: 4 (lower is better)
Translates to: FLPQVGVMGRMEAARSLLRCREG*ALTPDR
Trigger: GCGGTCAGGAGTGAGGGCCCAGCCTTCCCGGCACCT...TAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGCTGCCCCTCCATCAAAGAGTaGAACTCCCCAGAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: QIPAQTAATLSCWQVPCCPSIKE*NSPEPH
Trigger: ATGGGGCTCTGGGGAGTTCCACTCTTTGATGGAGGG...GCAGCATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp TCCAGGAGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGCCCCATTCTTCAGAATaGACACAGGATCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SRSSFLWGGARVEHRPAQPHSSE*TQDLGG
Trigger: CCCTCCCAGATCCTGTGTCCATTCTGAAGAATGGGG...CTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCCAGGCTACTGCCAGCTaGGGCCTTGCTGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGQATAS*GLAALK
Trigger: CTTCAGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTG...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR CCA 90 bp CCCTGGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGGTATGTGAACAAGGTTaGCACACAGGCCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: PWLCCVQMVRLLPAGALLVCEQG*HTGLTL
Trigger: GAGGGTGAGGCCTGTGTGCCAACCTTGTTCACATAC...CAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCGGCAGGAACGGTGCCTaGAAAGTGAGCAGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: QVGVMGRMEAARSLLGLAGRNGA*KVSRPK
Trigger: CTTCGGCCTGCTCACTTTCCAGGCACCGTTCCTGCC...GGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
3UTR CAA 72 bp AATATGGGAATAGCCCTCCCGGCCTGGTGCCAGCTCTaGGAGTTGACACGGTACAGGGAGGAGACACAGCCC +
Preference number: 4 (lower is better)
Translates to: NMGIALPAWCQL*ELTRYREETQP
Trigger: GGGCTGTGTCTCCTCCCTGTACCGTGTCAACTCCAAGAGCTGGCACCAGGCCGGGAGGGCTATTCCCATATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGAGAAGAGGAAGTTGGTaGCGAGCCTCCAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELRRGSW*RASRPG
Trigger: TCCAGGTCTGGAGGCTCGTCACCAACTTCCTCTTCT...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR TCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCCCCCGAAGAGAAACATaGAGACGAAGTCGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGPRRET*RRSRPC
Trigger: GCACGGCCGACTTCGTCTTCATGTTTCTCTTCGGGG...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR TCA 90 bp CTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCCCCGAAGAGAAACATaGAGACGAAGTCGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: LPQVGVMGRMEAARSLLGPRRET*RRSRPC
Trigger: GCACGGCCGACTTCGTCTTCATGTTTCTCTTCGGGG...GCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR TCA 90 bp AGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGCAGCGAGAAGCCCATaGGCGCCCAAGGCAGGAACG +
Preference number: 4 (lower is better)
Translates to: SSFCLFRWALAWAQPLGWAARSP*APKAGT
Trigger: CGTTCCTGCCTTGGGCGCTCATGGGCTTCTCGCTGC...CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR TCA 90 bp AGGAGGCCCCGTGCCACTGAGCATCCAGAAATAAACCACAACATGGACAGGCTTGCTGAGAGGCCACACTaGGTGAGGACGGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RRPRATEHPEINHNMDRLAERPH*VRTGQA
Trigger: TGCCTGCCCCGTCCTCACTCAGTGTGGCCTCTCAGC...AAGCCTGTCCATGTTGTGGTTTATTTCTGGATGCTCAGTGGCACGGGGCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCGCCCTCTTCTGCACCTaGATCCATGGGGCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: QVGVMGRMEAARSLLGLAALFCT*IHGALA
Trigger: TGCCAAAGCCCCATGGATTCAGGTGCAGAAGAGGGC...GGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCTCGGCAATGAAAGGGTaGGGCAGCCCTGTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LPQVGVMGRMEAARSLLGSAMKG*GSPVSP
Trigger: TGGAGACACAGGGCTGCCTCACCCTTTCATTGCCGA...GCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGAGGGCTGAACAGGTTTCATTGCTaGGGTGTTTGTTCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: PVLCGHCWAVASLGAGGLNRFHC*GVCSVH
Trigger: ATGGACAGAACAAACACCTCAGCAATGAAACCTGTT...CAGCCCTCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp GGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGTGGGGGTCACCTTACTGGAAGGCCTTaGACAAAGGGGAAGATTCCC +
Preference number: 4 (lower is better)
Translates to: GRMEAARSLLGLALGGGHLTGRP*TKGKIP
Trigger: GGGAATCTTCCCCTTTGTTCAAGGCCTTCCAGTAAG...GTGACCCCCACCCAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCGGGGTTCTTGGTCGCTaGGATGTGAGAGGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLGVLGR*DVRGGL
Trigger: GAGCCCTCCTCTCACATCTCAGCGACCAAGAACCCC...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CATCAGCCTGAAGGCACCACTGGCAGGAACATCTGTAGGCTGGTTTGGCACAACACACCAGCATGGCCATaGGGGCCTGGCCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: HQPEGTTGRNICRLVWHNTPAWP*GPGPGR
Trigger: TCTTCCTGGGCCAGGCCCTCATGGCCATGCTGGTGT...GTTGTGCCAAACCAGCCTACAGATGTTCCTGCCAGTGGTGCCTTCAGGCTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318109.12
CDS-3UTR TCA 90 bp CTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTGCAGGCCGAAGAAGTTaGCCCTCACCCGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LILFIQVGPCMGPAFRMGAGRRS*PSPEGC
Trigger: GCAGCCCTCGGGTGAGGGTCAACTTCTTCGGCCTGC...ACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR GCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCGGCCGCTAGTCCCTaGCACGCCATTGAACCTTCT +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGSAASP*HAIEPS
Trigger: AGAAGGTTCAATGGCGTGGCAGGGACTAGCGGCCGA...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR GCA 90 bp CTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTGTCACCGCCGGCACCTaGAGGAACTCGGCCGCTAGT +
Preference number: 4 (lower is better)
Translates to: LILFIQVGPCMGPAFRMGVTAGT*RNSAAS
Trigger: ACTAGCGGCCGAGTTCCTGCAGGTGCCGGCGGTGAC...ACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR GCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCAGCCCTCTTCCAGCATaGGGCAGTAGCGGAACACGA +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGSPLPA*GSSGTR
Trigger: TCGTGTTCCGCTACTGCCGCATGCTGGAAGAGGGCT...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR GCA 90 bp GTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGTGAGCTCAAAGCTCTaGCAGGCAACCATGGGCAGT +
Preference number: 4 (lower is better)
Translates to: VGVMGRMEAARSLLGLALVSSKL*QATMGS
Trigger: ACTGCCCATGGTTGCCTGGCAGAGCTTTGAGCTCAC...CAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GAGGAGGGCTCCTTTGAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCGCCCTCCCGGCCTGGTaGCAGCTCTTGGAGTTGACA +
Preference number: 4 (lower is better)
Translates to: EEGSFEHMLAWDSSQGVCALPAW*QLLELT
Trigger: TGTCAACTCCAAGAGCTGGCACCAGGCCGGGAGGGC...GCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTCAAAGGAGCCCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCAGATGGTCAGGCTACTaGCAGCTGGGGCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLRWSGY*QLGPCC
Trigger: GCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCT...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR GCA 90 bp ATTCCCAGCCCAGCTGCTCTTAGACATGAACAGGTTTCATTGCTGAGGTGTTTGTGCCGCGAGCTCTCCTaGCGTCCCTGGGCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: IPSPAALRHEQVSLLRCLCRELS*RPWAAL
Trigger: CAGGGCGGCCCAGGGACGGCAGGAGAGCTCGCGGCA...CAAACACCTCAGCAATGAAACCTGTTCATGTCTAAGAGCAGCTGGGCTGGGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp CAGGAGAGGCTAGATTGGCATCAGCCTGAAGGCACCACTGGCAGGAACATCTGTTTGGCCTCAGGAAGGTaGCGCGAGCTCTCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: QERLDWHQPEGTTGRNICLASGR*RELSCR
Trigger: ACGGCAGGAGAGCTCGCGGCACCTTCCTGAGGCCAA...ACAGATGTTCCTGCCAGTGGTGCCTTCAGGCTGATGCCAATCTAGCCTCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGGGGCAAGAGGCTCTCTaGCTTTCAGGAACAGCCCTA +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELGQEAL*LSGTAL
Trigger: TAGGGCTGTTCCTGAAAGGCAGAGAGCCTCTTGCCC...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR GCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCCAGCTGGGGCCTTGCTaGTCTGAAGTCCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLQLGPC*SEVPGS
Trigger: GCTTCCTGGGACTTCAGAGCAGCAAGGCCCCAGCTG...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406855.7
ENST00000620697.3
CDS-3UTR CCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGACGAGCCTCCAGACCTaGAACTTCCGGAACACAAGG +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELTSLQT*NFRNTR
Trigger: CCTTGTGTTCCGGAAGTTCCAGGTCTGGAGGCTCGT...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR CCA 90 bp ACCACTGGCAGGAACATCTGTAGGCTGGTTTGGCACAACCTAGGAGACGCCTGTGCAGGTCCACGAGGATaGAGTTGCCCAGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: TTGRNICRLVWHNLGDACAGPRG*SCPAAA
Trigger: CGCTGCTGCTGGGCAACTCCATCCTCGTGGACCTGC...ACAGGCGTCTCCTAGGTTGTGCCAAACCAGCCTACAGATGTTCCTGCCAGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318109.12
CDS-3UTR CCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCTGCCTCCAGGCTGGTTaGGGAAGACGTCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLCLQAG*GRRPPG
Trigger: TCCTGGAGGACGTCTTCCCCAACCAGCCTGGAGGCA...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR CCA 90 bp GAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCAGGAGCAGCTTTCTGTaGGGAGGGGCCCGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: EHMLAWDSSQGVCTQGLCRSSFL*GGARVE
Trigger: CTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCCT...GCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp ACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCCCTCCATCAAAGAGTGGAATGCGGGGGTGGCAGATaGGGTCCTGGCTGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: TLPREFALRASALHQRVECGGGR*GPGCSS
Trigger: TGAGGAACAGCCAGGACCCCATCTGCCACCCCCGCA...TTCCACTCTTTGATGGAGGGCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CAAGGGGACAGCTGGGCCTTACTGGAAGGCCTTGAACAAAGGGGAAGATTCCCATGCGGGGGTGGCAGATaGGGTCCTGGCTGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: QGDSWALLEGLEQRGRFPCGGGR*GPGCSS
Trigger: TGAGGAACAGCCAGGACCCCATCTGCCACCCCCGCA...TGGGAATCTTCCCCTTTGTTCAAGGCCTTCCAGTAAGGCCCAGCTGTCCCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp TGCAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATCACTGCTGCGGGGGTaGCAGATGGGGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CSSFCLFRWALAWAQPLGSLLRG*QMGSWL
Trigger: CAGCCAGGACCCCATCTGCCACCCCCGCAGCAGTGA...TCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp TTTCTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTATCACTGCTGCGGGGGTaGCAGATGGGGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: FLPQVGVMGRMEAARSLLSLLRG*QMGSWL
Trigger: CAGCCAGGACCCCATCTGCCACCCCCGCAGCAGTGA...TAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp GTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGGTCATGGGTAGGATaGAAGCTGCCAGAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: VGVMGRMEAARSLLGLALGSWVG*KLPEAS
Trigger: AGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCC...CAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCGCCCACCTGTCAGGGTaGCTGATGAGAGACAGGAGA +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGAHLSG*LMRDRR
Trigger: TCTCCTGTCTCTCATCAGCCACCCTGACAGGTGGGC...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGCATCTCCACAAGGTCTaGCTACAACACGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELHLHKV*LQHGGQ
Trigger: CTGCCCTCCGTGTTGTAGCCAGACCTTGTGGAGATG...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGCCCTCCATCAAAGAGTaGAACTCCCCAGAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELPSIKE*NSPEPH
Trigger: ATGGGGCTCTGGGGAGTTCCACTCTTTGATGGAGGG...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp TCCAGGAGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGGCTCTGATTAGGGATTaGGGTTCTTGGTCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SRSSFLWGGARVEHRPAQALIRD*GSWSLR
Trigger: TCTCAGCGACCAAGAACCCCAATCCCTAATCAGAGC...CTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGAGGTGTCCCCATTCTTCAGAATGGACACAGGATCTGGGAGGGCAGCAAACTGGCAGGTGCTGTGGCCTaGGCCAGCTCCTGCCTTACA +
Preference number: 4 (lower is better)
Translates to: GGVPILQNGHRIWEGSKLAGAVA*ASSCLT
Trigger: TGTAAGGCAGGAGCTGGCCCAGGCCACAGCACCTGC...CAGTTTGCTGCCCTCCCAGATCCTGTGTCCATTCTGAAGAATGGGGACACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp ACCACTGGCAGGAACATCTGTAGGCTGGTTTGGCACAACCTAGGAGACGCCTGTGCAGGTGCTGTGGCCTaGGCCAGCTCCTGCCTTACA +
Preference number: 4 (lower is better)
Translates to: TTGRNICRLVWHNLGDACAGAVA*ASSCLT
Trigger: TGTAAGGCAGGAGCTGGCCCAGGCCACAGCACCTGC...ACAGGCGTCTCCTAGGTTGTGCCAAACCAGCCTACAGATGTTCCTGCCAGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GAGGAGGGCTCCTTTGAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCCATAGCCAGGTCAGCTaGGGCCCTTTCCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: EEGSFEHMLAWDSSQGVCHSQVS*GPFPPQ
Trigger: CTGGGGTGGGAAAGGGCCCCAGCTGACCTGGCTATG...GCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTCAAAGGAGCCCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCCAGGCTACTGCCAGCTaGGGCCTTGCTGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLQATAS*GLAALK
Trigger: CTTCAGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTG...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR CCA 90 bp TTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTTCTCTCCTGCCGTCCCTaGGCCGCCCTGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: FCLFRWALAWAQPLGWVFLSCRP*AALALL
Trigger: CAGCAGAGCCAGGGCGGCCCAGGGACGGCAGGAGAG...AAAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp TTTCTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTACCTGCTCCCCTTGCTTaGCCTCAGGAAGGTGCCGCG +
Preference number: 4 (lower is better)
Translates to: FLPQVGVMGRMEAARSLLPAPLA*PQEGAA
Trigger: CGCGGCACCTTCCTGAGGCCAAGCAAGGGGAGCAGG...TAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCGGCAGGAACGGTGCCTaGAAAGTGAGCAGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLGRNGA*KVSRPK
Trigger: CTTCGGCCTGCTCACTTTCCAGGCACCGTTCCTGCC...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR CCA 90 bp TGCAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGAGACAGCCACGGACTGTaGGGTCACCCTCCACAGCCC +
Preference number: 4 (lower is better)
Translates to: CSSFCLFRWALAWAQPLGDSHGL*GHPPQP
Trigger: GGGCTGTGGAGGGTGACCCCACAGTCCGTGGCTGTC...TCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTGACAGCCACGGACTGTaGGGTCACCCTCCACAGCCC +
Preference number: 4 (lower is better)
Translates to: LILFIQVGPCMGPAFRMGDSHGL*GHPPQP
Trigger: GGGCTGTGGAGGGTGACCCCACAGTCCGTGGCTGTC...ACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCAGAAGAGGAAGTTGGTaGCGAGCCTCCAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: QVGVMGRMEAARSLLGLARRGSW*RASRPG
Trigger: TCCAGGTCTGGAGGCTCGTCACCAACTTCCTCTTCT...GGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR TCA 90 bp ACCACTGGCAGGAACATCTGTAGGCTGGTTTGGCACAACCTAGGAGACGCCTGTCTGCCTGGCAACCTGTaGGCTCAAAGCTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: TTGRNICRLVWHNLGDACLPGNL*AQSSAR
Trigger: CCTGGCAGAGCTTTGAGCTCACAGGTTGCCAGGCAG...ACAGGCGTCTCCTAGGTTGTGCCAAACCAGCCTACAGATGTTCCTGCCAGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CCTGGGTGCAGGAGGGCTGTTCTAGCTCCAGTGGCACCCATAGCCAGGTCAGCTTCACCAGATGAAAAATaGGGCATACGCCCACCTGTC +
Preference number: 4 (lower is better)
Translates to: PGCRRAVLAPVAPIARSASPDEK*GIRPPV
Trigger: GACAGGTGGGCGTATGCCTCATTTTTCATCTGGTGA...AGCTGACCTGGCTATGGGTGCCACTGGAGCTAGAACAGCCCTCCTGCACCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGACACCAGCATGGCCATaGGGGCCTGGCCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: QLILFIQVGPCMGPAFRMTPAWP*GPGPGR
Trigger: TCTTCCTGGGCCAGGCCCTCATGGCCATGCTGGTGT...CATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR GCA 90 bp CAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTGAGGACACAGGCTaGGGTGTAAGCCCGCGTCAC +
Preference number: 4 (lower is better)
Translates to: QLILFIQVGPCMGPAFRMGEDTG*GVSPRH
Trigger: GTGACGCGGGCTTACACCGCAGCCTGTGTCCTCACC...CATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR GCA 90 bp TTTGAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCGGTGAGGACACAGGCTaGGGTGTAAGCCCGCGTCAC +
Preference number: 4 (lower is better)
Translates to: FEHMLAWDSSQGVCTQGLGEDTG*GVSPRH
Trigger: GTGACGCGGGCTTACACCGCAGCCTGTGTCCTCACC...GAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp TGGCCCTCTTCTGCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATAGACGAAGTCGGCCGTaGGGCCGCGGAAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: WPSSAPESMGLWHHQMKNRRSRP*GRGRSP
Trigger: AGGGCTCCTTCCGCGGCCGCACGGCCGACTTCGTCT...ATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAGAAGAGGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp CCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGTAATTGGGGTCTTCTaGAGGGGCATCCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PQVGVMGRMEAARSLLGLVIGVF*RGIQEQ
Trigger: CTGCTCCTGGATGCCCCTGCAGAAGACCCCAATTAC...CAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR GCA 90 bp GAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCAGATGGGGAAGCCAGTaGTGTGGGCCAAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: EHMLAWDSSQGVCTQGLCRWGSQ*CGPRDC
Trigger: GCAGTCTCTTGGCCCACAGCACTGGCTTCCCCATCT...GCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCGTGAGCTCAAAGCTCTaGCAGGCAACCATGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGVSSKL*QATMGS
Trigger: ACTGCCCATGGTTGCCTGGCAGAGCTTTGAGCTCAC...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GAGGGCCCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGAAACAACAAGGAAAGCTaGCAGGTCAGAAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: EGPVLCGHCWAVASLGAGNNKES*QVRREK
Trigger: TTTTTCTCTTCTGACCTGGCAGCTTTCCTTGTTGTT...TCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGGGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATGAGGCATACGCCTGGCAGGTCCCATGCTaGCAGGGCAGGGCTAGGGTC +
Preference number: 4 (lower is better)
Translates to: APESMGLWHHQMKNEAYAWQVPC*QGRARV
Trigger: GACCCTAGCCCTGCCCTGGCAGCATGGGACCTGCCA...GGCGTATGCCTCATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCGTCCCTTCCCAGCCCTaGCTCCAAGGAGTTCATGTC +
Preference number: 4 (lower is better)
Translates to: EHMLAWDSSQGVCTQGLCVPSQP*LQGVHV
Trigger: GACATGAACTCCTTGGAGGCAGGGCTGGGAAGGGAC...GCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp AGGAGGCCCCGTGCCACTGAGCATCCAGAAATAAACCACAACATGGACAGGCTTGCCCTCCCGGCCTGGTaGCAGCTCTTGGAGTTGACA +
Preference number: 4 (lower is better)
Translates to: RRPRATEHPEINHNMDRLALPAW*QLLELT
Trigger: TGTCAACTCCAAGAGCTGGCACCAGGCCGGGAGGGC...AAGCCTGTCCATGTTGTGGTTTATTTCTGGATGCTCAGTGGCACGGGGCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp TTTCTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTACAGCTGGGGCCTTGCTaGTCTGAAGTCCCCTGCGGA +
Preference number: 4 (lower is better)
Translates to: FLPQVGVMGRMEAARSLLQLGPC*SEVPCG
Trigger: TCCGCAGGGGACTTCAGAGCAGCAAGGCCCCAGCTG...TAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp TTTGAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCCAGCTGGGGCCTTGCTaGTCTGAAGTCCCCTGCGGA +
Preference number: 4 (lower is better)
Translates to: FEHMLAWDSSQGVCTQGLQLGPC*SEVPCG
Trigger: TCCGCAGGGGACTTCAGAGCAGCAAGGCCCCAGCTG...GAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp AGGAGGCCCCGTGCCACTGAGCATCCAGAAATAAACCACAACATGGACAGGCTTCAGCTGGGGCCTTGCTaGTCTGAAGTCCCCTGCGGA +
Preference number: 4 (lower is better)
Translates to: RRPRATEHPEINHNMDRLQLGPC*SEVPCG
Trigger: TCCGCAGGGGACTTCAGAGCAGCAAGGCCCCAGCTG...AAGCCTGTCCATGTTGTGGTTTATTTCTGGATGCTCAGTGGCACGGGGCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCGGGCAAGAGGCTCTCTaGCTTTCAGGAACAGCCCTA +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGGQEAL*LSGTAL
Trigger: TAGGGCTGTTCCTGAAAGGCAGAGAGCCTCTTGCCC...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR GCA 90 bp CATCAGCCTGAAGGCACCACTGGCAGGAACATCTGTAGGCTGGTTTGGCACAACGGCCTCACCCTCCTCTaGCTCAGATTCCCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: HQPEGTTGRNICRLVWHNGLTLL*LRFPSG
Trigger: CCCACTTGGGAATCTGAGGCAGAGGAGGGTGAGGCC...GTTGTGCCAAACCAGCCTACAGATGTTCCTGCCAGTGGTGCCTTCAGGCTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp ATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTCCCTCACCCGAGGGCTaGGGCGGCTCCACACGTACA +
Preference number: 4 (lower is better)
Translates to: ILFIQVGPCMGPAFRMGFPSPEG*GGSTRT
Trigger: TGTACGTGTGGAGCCGCCGCAGCCCTCGGGTGAGGG...AAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCACGAGCCTCCAGACCTaGAACTTCCGGAACACAAGG +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGTSLQT*NFRNTR
Trigger: CCTTGTGTTCCGGAAGTTCCAGGTCTGGAGGCTCGT...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR CCA 90 bp CTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCACGAGCCTCCAGACCTaGAACTTCCGGAACACAAGG +
Preference number: 4 (lower is better)
Translates to: LPQVGVMGRMEAARSLLGTSLQT*NFRNTR
Trigger: CCTTGTGTTCCGGAAGTTCCAGGTCTGGAGGCTCGT...GCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp TGCAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGAGCAGGTCCACGAGGATaGAGTTGCCCAGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: CSSFCLFRWALAWAQPLGAGPRG*SCPAAA
Trigger: CGCTGCTGCTGGGCAACTCCATCCTCGTGGACCTGC...TCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp GGAGGTGTCCCCATTCTTCAGAATGGACACAGGATCTGGGAGGGCAGCAAACTGCTCTTGCCTCCAGGCTaGTTGGGGAAGACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GGVPILQNGHRIWEGSKLLLPPG*LGKTSS
Trigger: GGAGGACGTCTTCCCCAACCAGCCTGGAGGCAAGAG...CAGTTTGCTGCCCTCCCAGATCCTGTGTCCATTCTGAAGAATGGGGACACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp AGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGTGCGGGGGTGGCAGATaGGGTCCTGGCTGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: SSFCLFRWALAWAQPLGWCGGGR*GPGCSS
Trigger: TGAGGAACAGCCAGGACCCCATCTGCCACCCCCGCA...CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp TTTCTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTATGCGGGGGTGGCAGATaGGGTCCTGGCTGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: FLPQVGVMGRMEAARSLLCGGGR*GPGCSS
Trigger: TGAGGAACAGCCAGGACCCCATCTGCCACCCCCGCA...TAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp CATCAGCCTGAAGGCACCACTGGCAGGAACATCTGTAGGCTGGTTTGGCACAACAGGTGGGCCCTTGCATaGGCCCAGCCTTTAGGATGG +
Preference number: 4 (lower is better)
Translates to: HQPEGTTGRNICRLVWHNRWALA*AQPLGW
Trigger: CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCT...GTTGTGCCAAACCAGCCTACAGATGTTCCTGCCAGTGGTGCCTTCAGGCTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGTTCTGTTTATTCAGGTaGGCCCTTGCATGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELFCLFR*ALAWAQ
Trigger: CTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGTTCTGTTTATTCAGGTaGGCCCTTGCATGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VGVMGRMEAARSLLGLALFCLFR*ALAWAQ
Trigger: CTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA...CAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp ACCACTGGCAGGAACATCTGTAGGCTGGTTTGGCACAACCTAGGAGACGCCTGTACTTGCCCAAGGCCCTaGTGGGGCCAGGATGAGAAC +
Preference number: 4 (lower is better)
Translates to: TTGRNICRLVWHNLGDACTCPRP*WGQDEN
Trigger: GTTCTCATCCTGGCCCCACCAGGGCCTTGGGCAAGT...ACAGGCGTCTCCTAGGTTGTGCCAAACCAGCCTACAGATGTTCCTGCCAGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGATCTGTAGGCTGGTTTaGCACAACCTAGGAGACGCC +
Preference number: 4 (lower is better)
Translates to: LSSSQLPSACSPSRPRELICRLV*HNLGDA
Trigger: GGCGTCTCCTAGGTTGTGCCAAACCAGCCTACAGAT...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGACAGCTGGGCCTTACTaGAAGGCCTTGAACAAAGGG +
Preference number: 4 (lower is better)
Translates to: VGVMGRMEAARSLLGLALTAGPY*KALNKG
Trigger: CCCTTTGTTCAAGGCCTTCCAGTAAGGCCCAGCTGT...CAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCCCTCAGCAAGGGGACAGCTaGGCCTTACTGGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: HMLAWDSSQGVCTQGLCPQQGDS*ALLEGL
Trigger: AAGGCCTTCCAGTAAGGCCCAGCTGTCCCCTTGCTG...AGGGCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CTCCCGGCCTGGTGCCAGCTCTTGGAGTTGACACGGTACAGGGAGGAGACACAGGCTCTGATTAGGGATTaGGGTTCTTGGTCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LPAWCQLLELTRYREETQALIRD*GSWSLR
Trigger: TCTCAGCGACCAAGAACCCCAATCCCTAATCAGAGC...CTGTGTCTCCTCCCTGTACCGTGTCAACTCCAAGAGCTGGCACCAGGCCGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR CAA 72 bp GCTCAAAGCTCTGCCAGGCAACCATGGGCAGTTTCTTaGCCCTCTGTGGGCACCCCTATCCTACCACCTGCA +
Preference number: 4 (lower is better)
Translates to: AQSSARQPWAVS*PSVGTPILPPA
Trigger: TGCAGGTGGTAGGATAGGGGTGCCCACAGAGGGCAAAGAAACTGCCCATGGTTGCCTGGCAGAGCTTTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
3UTR CAA 72 bp CACAGCAAGGGGACAGCTGGGCCTTACTGGAAGGCCTaGAACAAAGGGGAAGATTCCCAGCCCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: HSKGTAGPYWKA*NKGEDSQPSCS
Trigger: AGAGCAGCTGGGCTGGGAATCTTCCCCTTTGTTCAAGGCCTTCCAGTAAGGCCCAGCTGTCCCCTTGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCAGAAGAGGAAGTTGGTaGCGAGCCTCCAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLRRGSW*RASRPG
Trigger: TCCAGGTCTGGAGGCTCGTCACCAACTTCCTCTTCT...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR TCA 90 bp ACCACTGGCAGGAACATCTGTAGGCTGGTTTGGCACAACCTAGGAGACGCCTGTCCCCGAAGAGAAACATaGAGACGAAGTCGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: TTGRNICRLVWHNLGDACPRRET*RRSRPC
Trigger: GCACGGCCGACTTCGTCTTCATGTTTCTCTTCGGGG...ACAGGCGTCTCCTAGGTTGTGCCAAACCAGCCTACAGATGTTCCTGCCAGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp ATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTGCAGCGAGAAGCCCATaGGCGCCCAAGGCAGGAACG +
Preference number: 4 (lower is better)
Translates to: ILFIQVGPCMGPAFRMGFAARSP*APKAGT
Trigger: CGTTCCTGCCTTGGGCGCTCATGGGCTTCTCGCTGC...AAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR TCA 90 bp GCCTTACTGGAAGGCCTTGAACAAAGGGGAAGATTCCCAGCCCAGCTGCTCTTACACCTGCAGTTGGGCTaGGAGGCCACACTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: ALLEGLEQRGRFPAQLLLHLQLG*EATLSE
Trigger: CTCACTCAGTGTGGCCTCTCAGCCCAACTGCAGGTG...TAAGAGCAGCTGGGCTGGGAATCTTCCCCTTTGTTCAAGGCCTTCCAGTAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp TGCAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGAGCAGCCGAAATCTGGTaGACTTCCCCGCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: CSSFCLFRWALAWAQPLGAAEIW*TSPLTG
Trigger: GCCAGTCAGCGGGGAAGTTCACCAGATTTCGGCTGC...TCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTGCAGCCGAAATCTGGTaGACTTCCCCGCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: LILFIQVGPCMGPAFRMGAAEIW*TSPLTG
Trigger: GCCAGTCAGCGGGGAAGTTCACCAGATTTCGGCTGC...ACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp GGCCTTGAACAAAGGGGAAGATTCCCAGCCCAGCTGCTCTTAGACATGAACAGGGCAGCCGAAATCTGGTaGACTTCCCCGCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: GLEQRGRFPAQLLLDMNRAAEIW*TSPLTG
Trigger: GCCAGTCAGCGGGGAAGTTCACCAGATTTCGGCTGC...CCTGTTCATGTCTAAGAGCAGCTGGGCTGGGAATCTTCCCCTTTGTTCAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp GTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGTCACCAGATGAAAAATaGGGCATACGCCCACCTGTC +
Preference number: 4 (lower is better)
Translates to: VGVMGRMEAARSLLGLALSPDEK*GIRPPV
Trigger: GACAGGTGGGCGTATGCCTCATTTTTCATCTGGTGA...CAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGCTGCTTTGGCATCACCAGATaGAAAATGAGGCATACGCCC +
Preference number: 4 (lower is better)
Translates to: QIPAQTAATLSCWQVPCCFGITR*KMRHTP
Trigger: GGGCGTATGCCTCATTTTTCATCTGGTGATGCCAAA...GCAGCATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp GGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGCTCTTTTGGCATCACCAGATaGAAAATGAGGCATACGCCC +
Preference number: 4 (lower is better)
Translates to: GSAVSRWSGYCQLGPCCSFGITR*KMRHTP
Trigger: GGGCGTATGCCTCATTTTTCATCTGGTGATGCCAAA...AGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp GAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCTTGGTCGCTGAGATGTaGGAGGAGGGCTCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: EHMLAWDSSQGVCTQGLCLVAEM*EEGSFE
Trigger: CTCAAAGGAGCCCTCCTCTCACATCTCAGCGACCAA...GCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCGCAGAGGCAGAGCTCTaGTTAGGGATTGGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: LPQVGVMGRMEAARSLLGAEAEL*LGIGVL
Trigger: AAGAACCCCAATCCCTAATCAGAGCTCTGCCTCTGC...GCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CATCAGCCTGAAGGCACCACTGGCAGGAACATCTGTAGGCTGGTTTGGCACAACGCCAGCTCTTGGAGTTaGCACGGTACAGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: HQPEGTTGRNICRLVWHNASSWS*HGTGRR
Trigger: TCTCCTCCCTGTACCGTGTCAACTCCAAGAGCTGGC...GTTGTGCCAAACCAGCCTACAGATGTTCCTGCCAGTGGTGCCTTCAGGCTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCGACGAAGGTGGTATGTaGACAAGGTTGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGDEGGM*TRLAHR
Trigger: CCTGTGTGCCAACCTTGTTCACATACCACCTTCGTC...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR GCA 90 bp ATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTGTCACCGCCGGCACCTaGAGGAACTCGGCCGCTAGT +
Preference number: 4 (lower is better)
Translates to: ILFIQVGPCMGPAFRMGFVTAGT*RNSAAS
Trigger: ACTAGCGGCCGAGTTCCTGCAGGTGCCGGCGGTGAC...AAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR GCA 90 bp TTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTTGTCACCGCCGGCACCTaGAGGAACTCGGCCGCTAGT +
Preference number: 4 (lower is better)
Translates to: FCLFRWALAWAQPLGWVFVTAGT*RNSAAS
Trigger: ACTAGCGGCCGAGTTCCTGCAGGTGCCGGCGGTGAC...AAAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR GCA 90 bp CACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCCCTGTAATTGGGGTCTTCTaGAGGGGCATCCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: HMLAWDSSQGVCTQGLCPVIGVF*RGIQEQ
Trigger: CTGCTCCTGGATGCCCCTGCAGAAGACCCCAATTAC...AGGGCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp CAAGGGGACAGCTGGGCCTTACTGGAAGGCCTTGAACAAAGGGGAAGATTCCCACCCTATCCTACCACCTaGAGTTGGGCTGAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QGDSWALLEGLEQRGRFPPYPTT*SWAERP
Trigger: TGGCCTCTCAGCCCAACTGCAGGTGGTAGGATAGGG...TGGGAATCTTCCCCTTTGTTCAAGGCCTTCCAGTAAGGCCCAGCTGTCCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp CAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGCTAGGGTCAGAGGCTaGTGTGCTCCCTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: QLILFIQVGPCMGPAFRMARVRG*CAPWKW
Trigger: CCACTTCCAGGGAGCACAGCAGCCTCTGACCCTAGC...CATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp TTTCTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTACCCAGCACAGACTGCTaGCACCCTCAGCTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: FLPQVGVMGRMEAARSLLPSTDC*HPQLLA
Trigger: TGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGG...TAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp CAGGAGAGGCTAGATTGGCATCAGCCTGAAGGCACCACTGGCAGGAACATCTGTGATCCCAGCACAGACTaGTGCCACCCTCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: QERLDWHQPEGTTGRNICDPSTD*CHPQLL
Trigger: CAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATC...ACAGATGTTCCTGCCAGTGGTGCCTTCAGGCTGATGCCAATCTAGCCTCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp AGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGAGATGGTCAGGCTACTaGCAGCTGGGGCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SSFCLFRWALAWAQPLGWRWSGY*QLGPCC
Trigger: GCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCT...CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGTGCCTCCAGGCTGGTTaGGGAAGACGTCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QLILFIQVGPCMGPAFRMCLQAG*GRRPPG
Trigger: TCCTGGAGGACGTCTTCCCCAACCAGCCTGGAGGCA...CATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp AGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGTGCCTCCAGGCTGGTTaGGGAAGACGTCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SSFCLFRWALAWAQPLGWCLQAG*GRRPPG
Trigger: TCCTGGAGGACGTCTTCCCCAACCAGCCTGGAGGCA...CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp TTTCTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTACTCTTGCCTCCAGGCTaGTTGGGGAAGACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: FLPQVGVMGRMEAARSLLLLPPG*LGKTSS
Trigger: GGAGGACGTCTTCCCCAACCAGCCTGGAGGCAAGAG...TAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp AGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGAGGAGCAGCTTTCTGTaGGGAGGGGCCCGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: SSFCLFRWALAWAQPLGWRSSFL*GGARVE
Trigger: CTCAACACGGGCCCCTCCCCACAGAAAGCTGCTCCT...CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
CDS-3UTR CCA 90 bp TGCAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGAAGGTGGGCCCTTGCATaGGCCCAGCCTTTAGGATGG +
Preference number: 4 (lower is better)
Translates to: CSSFCLFRWALAWAQPLGRWALA*AQPLGW
Trigger: CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCT...TCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp CTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCTTCTGTTTATTCAGGTaGGCCCTTGCATGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LPQVGVMGRMEAARSLLGFCLFR*ALAWAQ
Trigger: CTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA...GCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp TTTCTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAACTTGCCCAAGGCCCTaGTGGGGCCAGGATGAGAAC +
Preference number: 4 (lower is better)
Translates to: FLPQVGVMGRMEAARSLLTCPRP*WGQDEN
Trigger: GTTCTCATCCTGGCCCCACCAGGGCCTTGGGCAAGT...TAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCCCTAACTTCCCCGCTGACTaGCAGGTAGCAGAGGCCTAT +
Preference number: 4 (lower is better)
Translates to: HMLAWDSSQGVCTQGLCPNFPAD*QVAEAY
Trigger: ATAGGCCTCTGCTACCTGCCAGTCAGCGGGGAAGTT...AGGGCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp ACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCCCTCCATCAAAGAGTGGAAGGATGGAAGGAACCTTaGCTGCCTCACCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: TLPREFALRASALHQRVEGWKEP*LPHPTG
Trigger: ACCTGTGGGGTGAGGCAGCCAAGGTTCCTTCCATCC...TTCCACTCTTTGATGGAGGGCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp ACCACTGGCAGGAACATCTGTAGGCTGGTTTGGCACAACCTAGGAGACGCCTGTCAGCAAGGGGACAGCTaGGCCTTACTGGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: TTGRNICRLVWHNLGDACQQGDS*ALLEGL
Trigger: AAGGCCTTCCAGTAAGGCCCAGCTGTCCCCTTGCTG...ACAGGCGTCTCCTAGGTTGTGCCAAACCAGCCTACAGATGTTCCTGCCAGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCAATGGACACAGGATCTaGGAGGGCAGCAAACTGGCT +
Preference number: 4 (lower is better)
Translates to: LPQVGVMGRMEAARSLLGNGHRI*EGSKLA
Trigger: AGCCAGTTTGCTGCCCTCCCAGATCCTGTGTCCATT...GCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp ATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTGGGCTGTCGCCAGCCTaGGTGCAGGAGGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: ILFIQVGPCMGPAFRMGFGLSPA*VQEGCS
Trigger: AGAACAGCCCTCCTGCACCCAGGCTGGCGACAGCCC...AAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp TGGCCCTCTTCTGCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATCTGTGTGGGCACTGCTaGGCTGTCGCCAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: WPSSAPESMGLWHHQMKNLCGHC*AVASLG
Trigger: ACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAG...ATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAGAAGAGGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp ATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTCTGTGTGGGCACTGCTaGGCTGTCGCCAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: ILFIQVGPCMGPAFRMGFLCGHC*AVASLG
Trigger: ACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAG...AAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGCAGGCTACTGCCAGCTaGGGCCTTGCTGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: QLILFIQVGPCMGPAFRMQATAS*GLAALK
Trigger: CTTCAGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTG...CATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCGTATGTGAACAAGGTTaGCACACAGGCCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGVCEQG*HTGLTL
Trigger: GAGGGTGAGGCCTGTGTGCCAACCTTGTTCACATAC...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR CCA 90 bp AGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGGCAGGAACGGTGCCTaGAAAGTGAGCAGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: SSFCLFRWALAWAQPLGWGRNGA*KVSRPK
Trigger: CTTCGGCCTGCTCACTTTCCAGGCACCGTTCCTGCC...CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp TTTCTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCAGGAACGGTGCCTaGAAAGTGAGCAGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: FLPQVGVMGRMEAARSLLGRNGA*KVSRPK
Trigger: CTTCGGCCTGCTCACTTTCCAGGCACCGTTCCTGCC...TAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR TCA 90 bp GAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCACACAAGGTGCGGGTTaGAGTAGAGTTGAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: EHMLAWDSSQGVCTQGLCTQGAG*SRVERG
Trigger: GCCCCTTTCAACTCTACTTCAACCCGCACCTTGTGT...GCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318109.12
CDS-3UTR TCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCACACAAGGTGCGGGTTaGAGTAGAGTTGAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLTQGAG*SRVERG
Trigger: GCCCCTTTCAACTCTACTTCAACCCGCACCTTGTGT...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR TCA 90 bp AGGAGGCCCCGTGCCACTGAGCATCCAGAAATAAACCACAACATGGACAGGCTTCCCCGAAGAGAAACATaGAGACGAAGTCGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: RRPRATEHPEINHNMDRLPRRET*RRSRPC
Trigger: GCACGGCCGACTTCGTCTTCATGTTTCTCTTCGGGG...AAGCCTGTCCATGTTGTGGTTTATTTCTGGATGCTCAGTGGCACGGGGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp ATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTGGTGAACTTCCCCGCTaGCTGGCAGGTAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: ILFIQVGPCMGPAFRMGFGELPR*LAGSRG
Trigger: GCCTCTGCTACCTGCCAGTCAGCGGGGAAGTTCACC...AAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp AGGAGGCCCCGTGCCACTGAGCATCCAGAAATAAACCACAACATGGACAGGCTTTCGGCAATGAAAGGGTaGGGCAGCCCTGTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RRPRATEHPEINHNMDRLSAMKG*GSPVSP
Trigger: TGGAGACACAGGGCTGCCTCACCCTTTCATTGCCGA...AAGCCTGTCCATGTTGTGGTTTATTTCTGGATGCTCAGTGGCACGGGGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp AAAGCTGCCAGGTCAGAAGAGAAAAATGAGCCACAGGGGTCGGATAAGGCTCACGGGGTTCTTGGTCGCTaGGATGTGAGAGGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: KAARSEEKNEPQGSDKAHGVLGR*DVRGGL
Trigger: GAGCCCTCCTCTCACATCTCAGCGACCAAGAACCCC...GTGAGCCTTATCCGACCCCTGTGGCTCATTTTTCTCTTCTGACCTGGCAGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCCAGCTCCAGCCTTACTaGAGAGAATGGGCACAGATC +
Preference number: 4 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLQLQPY*REWAQI
Trigger: GATCTGTGCCCATTCTCTTCAGTAAGGCTGGAGCTG...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp GGCCTTGAACAAAGGGGAAGATTCCCAGCCCAGCTGCTCTTAGACATGAACAGGGCCAGCTCTTGGAGTTaGCACGGTACAGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: GLEQRGRFPAQLLLDMNRASSWS*HGTGRR
Trigger: TCTCCTCCCTGTACCGTGTCAACTCCAAGAGCTGGC...CCTGTTCATGTCTAAGAGCAGCTGGGCTGGGAATCTTCCCCTTTGTTCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCGACGAAGGTGGTATGTaGACAAGGTTGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLDEGGM*TRLAHR
Trigger: CCTGTGTGCCAACCTTGTTCACATACCACCTTCGTC...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR GCA 90 bp AGGAGGCCCCGTGCCACTGAGCATCCAGAAATAAACCACAACATGGACAGGCTTAGCCCTCTTCCAGCATaGGGCAGTAGCGGAACACGA +
Preference number: 4 (lower is better)
Translates to: RRPRATEHPEINHNMDRLSPLPA*GSSGTR
Trigger: TCGTGTTCCGCTACTGCCGCATGCTGGAAGAGGGCT...AAGCCTGTCCATGTTGTGGTTTATTTCTGGATGCTCAGTGGCACGGGGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GGCCTTGAACAAAGGGGAAGATTCCCAGCCCAGCTGCTCTTAGACATGAACAGGAGCCCTCTTCCAGCATaGGGCAGTAGCGGAACACGA +
Preference number: 4 (lower is better)
Translates to: GLEQRGRFPAQLLLDMNRSPLPA*GSSGTR
Trigger: TCGTGTTCCGCTACTGCCGCATGCTGGAAGAGGGCT...CCTGTTCATGTCTAAGAGCAGCTGGGCTGGGAATCTTCCCCTTTGTTCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp TGCAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGAAGCCCTCTTCCAGCATaGGGCAGTAGCGGAACACGA +
Preference number: 4 (lower is better)
Translates to: CSSFCLFRWALAWAQPLGSPLPA*GSSGTR
Trigger: TCGTGTTCCGCTACTGCCGCATGCTGGAAGAGGGCT...TCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR GCA 90 bp GCCTTACTGGAAGGCCTTGAACAAAGGGGAAGATTCCCAGCCCAGCTGCTCTTAAGCCCTCTTCCAGCATaGGGCAGTAGCGGAACACGA +
Preference number: 4 (lower is better)
Translates to: ALLEGLEQRGRFPAQLLLSPLPA*GSSGTR
Trigger: TCGTGTTCCGCTACTGCCGCATGCTGGAAGAGGGCT...TAAGAGCAGCTGGGCTGGGAATCTTCCCCTTTGTTCAAGGCCTTCCAGTAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GGAGGTGTCCCCATTCTTCAGAATGGACACAGGATCTGGGAGGGCAGCAAACTGGTAATTGGGGTCTTCTaGAGGGGCATCCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GGVPILQNGHRIWEGSKLVIGVF*RGIQEQ
Trigger: CTGCTCCTGGATGCCCCTGCAGAAGACCCCAATTAC...CAGTTTGCTGCCCTCCCAGATCCTGTGTCCATTCTGAAGAATGGGGACACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp CAAGGGGACAGCTGGGCCTTACTGGAAGGCCTTGAACAAAGGGGAAGATTCCCAGTAATTGGGGTCTTCTaGAGGGGCATCCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QGDSWALLEGLEQRGRFPVIGVF*RGIQEQ
Trigger: CTGCTCCTGGATGCCCCTGCAGAAGACCCCAATTAC...TGGGAATCTTCCCCTTTGTTCAAGGCCTTCCAGTAAGGCCCAGCTGTCCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp TGCAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGAATTCAGGTGGGCCCTTaGATGGGCCCAGCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: CSSFCLFRWALAWAQPLGIQVGP*MGPAFR
Trigger: CCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAAT...TCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR GCA 90 bp CAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGAGATGGGGAAGCCAGTaGTGTGGGCCAAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: QLILFIQVGPCMGPAFRMRWGSQ*CGPRDC
Trigger: GCAGTCTCTTGGCCCACAGCACTGGCTTCCCCATCT...CATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp TTTCTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTACCCTATCCTACCACCTaGAGTTGGGCTGAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: FLPQVGVMGRMEAARSLLPYPTT*SWAERP
Trigger: TGGCCTCTCAGCCCAACTGCAGGTGGTAGGATAGGG...TAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GGCCTTGAACAAAGGGGAAGATTCCCAGCCCAGCTGCTCTTAGACATGAACAGGGATCCCAGCACAGACTaGTGCCACCCTCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: GLEQRGRFPAQLLLDMNRDPSTD*CHPQLL
Trigger: CAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATC...CCTGTTCATGTCTAAGAGCAGCTGGGCTGGGAATCTTCCCCTTTGTTCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp AAAGCTGCCAGGTCAGAAGAGAAAAATGAGCCACAGGGGTCGGATAAGGCTCACAGATGGTCAGGCTACTaGCAGCTGGGGCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: KAARSEEKNEPQGSDKAHRWSGY*QLGPCC
Trigger: GCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCT...GTGAGCCTTATCCGACCCCTGTGGCTCATTTTTCTCTTCTGACCTGGCAGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATGAGGCATACGCCCTCTTGCCTCCAGGCTaGTTGGGGAAGACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: APESMGLWHHQMKNEAYALLPPG*LGKTSS
Trigger: GGAGGACGTCTTCCCCAACCAGCCTGGAGGCAAGAG...GGCGTATGCCTCATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp AGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGGAGGGGCAGGTAATTaGGGTCTTCTGCAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: SSFCLFRWALAWAQPLGWGGAGN*GLLQGH
Trigger: ATGCCCCTGCAGAAGACCCCAATTACCTGCCCCTCC...CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp CAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGAGGGGCAGGTAATTaGGGTCTTCTGCAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: QLILFIQVGPCMGPAFRMGGAGN*GLLQGH
Trigger: ATGCCCCTGCAGAAGACCCCAATTACCTGCCCCTCC...CATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp TTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTTTGGCAGATGGGGTCCTaGCTGTTCCTCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: FCLFRWALAWAQPLGWVFWQMGS*LFLREG
Trigger: CCCCTCCCTGAGGAACAGCCAGGACCCCATCTGCCA...AAAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp ATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTTGGCAGATGGGGTCCTaGCTGTTCCTCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ILFIQVGPCMGPAFRMGFWQMGS*LFLREG
Trigger: CCCCTCCCTGAGGAACAGCCAGGACCCCATCTGCCA...AAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCTTTCTTTGCCCTCTGTaGGCACCCCTATCCTACCAC +
Preference number: 4 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLFLCPL*APLSYH
Trigger: GTGGTAGGATAGGGGTGCCCACAGAGGGCAAAGAAA...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCTCTGCCAGGCAACCATaGGCAGTTTCTTTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: EHMLAWDSSQGVCTQGLCSARQP*AVSLPS
Trigger: AGAGGGCAAAGAAACTGCCCATGGTTGCCTGGCAGA...GCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTCAAAAGCTCTGCCTaGCAACCTGTGAGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LPQVGVMGRMEAARSLLGLKSSA*QPVSSK
Trigger: CTTTGAGCTCACAGGTTGCCAGGCAGAGCTTTTGAG...GCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp ACCACTGGCAGGAACATCTGTAGGCTGGTTTGGCACAACCTAGGAGACGCCTGTAACTTCCCCGCTGACTaGCAGGTAGCAGAGGCCTAT +
Preference number: 4 (lower is better)
Translates to: TTGRNICRLVWHNLGDACNFPAD*QVAEAY
Trigger: ATAGGCCTCTGCTACCTGCCAGTCAGCGGGGAAGTT...ACAGGCGTCTCCTAGGTTGTGCCAAACCAGCCTACAGATGTTCCTGCCAGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCGCTCTGATTAGGGATTaGGGTTCTTGGTCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PSRPRELRRVAVRLRARGALIRD*GSWSLR
Trigger: TCTCAGCGACCAAGAACCCCAATCCCTAATCAGAGC...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp TGGCCCTCTTCTGCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATTGTGCTCCCTGGAAGTaGGGTAGGGCCCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: WPSSAPESMGLWHHQMKNCAPWK*GRAPCG
Trigger: CCCACATGGGGCCCTACCCCACTTCCAGGGAGCACA...ATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAGAAGAGGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp TTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTTGCAGGTGCTGTGGCCTaGGCCAGCTCCTGCCTTACA +
Preference number: 4 (lower is better)
Translates to: FCLFRWALAWAQPLGWVFAGAVA*ASSCLT
Trigger: TGTAAGGCAGGAGCTGGCCCAGGCCACAGCACCTGC...AAAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCGTATGTGAACAAGGTTaGCACACAGGCCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLVCEQG*HTGLTL
Trigger: GAGGGTGAGGCCTGTGTGCCAACCTTGTTCACATAC...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR CCA 90 bp AAGCTGCCAGGTCAGAAGAGAAAAATGAGCCACAGGGGTCGGATAAGGCTCACAGGCAGGAACGGTGCCTaGAAAGTGAGCAGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: KLPGQKRKMSHRGRIRLTGRNGA*KVSRPK
Trigger: CTTCGGCCTGCTCACTTTCCAGGCACCGTTCCTGCC...TGTGAGCCTTATCCGACCCCTGTGGCTCATTTTTCTCTTCTGACCTGGCAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318109.12
CDS-3UTR TCA 90 bp TGCAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGAAGAAGAGGAAGTTGGTaGCGAGCCTCCAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: CSSFCLFRWALAWAQPLGRRGSW*RASRPG
Trigger: TCCAGGTCTGGAGGCTCGTCACCAACTTCCTCTTCT...TCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR TCA 90 bp CTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTAGAAGAGGAAGTTGGTaGCGAGCCTCCAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: LILFIQVGPCMGPAFRMGRRGSW*RASRPG
Trigger: TCCAGGTCTGGAGGCTCGTCACCAACTTCCTCTTCT...ACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR TCA 90 bp ATTCCCAGCCCAGCTGCTCTTAGACATGAACAGGTTTCATTGCTGAGGTGTTTGGGTGAACTTCCCCGCTaGCTGGCAGGTAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: IPSPAALRHEQVSLLRCLGELPR*LAGSRG
Trigger: GCCTCTGCTACCTGCCAGTCAGCGGGGAAGTTCACC...CAAACACCTCAGCAATGAAACCTGTTCATGTCTAAGAGCAGCTGGGCTGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp TTTCTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAAGATTGGCATCAGCCTaGAGGCACCACTGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: FLPQVGVMGRMEAARSLLRLASA*RHHWQE
Trigger: TTCCTGCCAGTGGTGCCTTCAGGCTGATGCCAATCT...TAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp ACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCCCTCCATCAAAGAGTGGAAAGAGGAGGGCTCCTTTaGGCACATGTTAGCATGGGA +
Preference number: 4 (lower is better)
Translates to: TLPREFALRASALHQRVERGGLL*AHVSMG
Trigger: TCCCATGCTAACATGTGCTCAAAGGAGCCCTCCTCT...TTCCACTCTTTGATGGAGGGCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp TTTCTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTATTGGTCGCTGAGATGTaGGAGGAGGGCTCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: FLPQVGVMGRMEAARSLLLVAEM*EEGSFE
Trigger: CTCAAAGGAGCCCTCCTCTCACATCTCAGCGACCAA...TAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp TTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTTGGGGTTCTTGGTCGCTaGGATGTGAGAGGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: FCLFRWALAWAQPLGWVFGVLGR*DVRGGL
Trigger: GAGCCCTCCTCTCACATCTCAGCGACCAAGAACCCC...AAAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp ACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCCCTCCATCAAAGAGTGGAAGCAGAGGCAGAGCTCTaGTTAGGGATTGGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: TLPREFALRASALHQRVEAEAEL*LGIGVL
Trigger: AAGAACCCCAATCCCTAATCAGAGCTCTGCCTCTGC...TTCCACTCTTTGATGGAGGGCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp GGAGGTGTCCCCATTCTTCAGAATGGACACAGGATCTGGGAGGGCAGCAAACTGGACGAAGGTGGTATGTaGACAAGGTTGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: GGVPILQNGHRIWEGSKLDEGGM*TRLAHR
Trigger: CCTGTGTGCCAACCTTGTTCACATACCACCTTCGTC...CAGTTTGCTGCCCTCCCAGATCCTGTGTCCATTCTGAAGAATGGGGACACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp GCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATGAGGCATACGCCTCGGCCGCTAGTCCCTaGCACGCCATTGAACCTTCT +
Preference number: 4 (lower is better)
Translates to: APESMGLWHHQMKNEAYASAASP*HAIEPS
Trigger: AGAAGGTTCAATGGCGTGGCAGGGACTAGCGGCCGA...GGCGTATGCCTCATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp TTTCTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGTAATTGGGGTCTTCTaGAGGGGCATCCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: FLPQVGVMGRMEAARSLLVIGVF*RGIQEQ
Trigger: CTGCTCCTGGATGCCCCTGCAGAAGACCCCAATTAC...TAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR GCA 90 bp CTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTGTAATTGGGGTCTTCTaGAGGGGCATCCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LILFIQVGPCMGPAFRMGVIGVF*RGIQEQ
Trigger: CTGCTCCTGGATGCCCCTGCAGAAGACCCCAATTAC...ACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR GCA 90 bp TCTTCTGCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATGAGGCATGCCAGCTGGGGCCTTaGTGCTCTGAAGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: SSAPESMGLWHHQMKNEACQLGP*CSEVPC
Trigger: GCAGGGGACTTCAGAGCAGCAAGGCCCCAGCTGGCA...TGCCTCATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp TGGCCCTCTTCTGCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATAGATGGTCAGGCTACTaGCAGCTGGGGCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: WPSSAPESMGLWHHQMKNRWSGY*QLGPCC
Trigger: GCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCT...ATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAGAAGAGGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp AAGCTGCCAGGTCAGAAGAGAAAAATGAGCCACAGGGGTCGGATAAGGCTCACAGGAGGGGCAGGTAATTaGGGTCTTCTGCAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: KLPGQKRKMSHRGRIRLTGGAGN*GLLQGH
Trigger: ATGCCCCTGCAGAAGACCCCAATTACCTGCCCCTCC...TGTGAGCCTTATCCGACCCCTGTGGCTCATTTTTCTCTTCTGACCTGGCAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp ACCACTGGCAGGAACATCTGTAGGCTGGTTTGGCACAACCTAGGAGACGCCTGTAGGCATAGAAGGATGTaGCCAGGTGAGATGGGGAAG +
Preference number: 4 (lower is better)
Translates to: TTGRNICRLVWHNLGDACRHRRM*PGEMGK
Trigger: CTTCCCCATCTCACCTGGCCACATCCTTCTATGCCT...ACAGGCGTCTCCTAGGTTGTGCCAAACCAGCCTACAGATGTTCCTGCCAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp AAGCTGCCAGGTCAGAAGAGAAAAATGAGCCACAGGGGTCGGATAAGGCTCACAGGTAGCAGAGGCCTATaGTGGGCAGGACTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: KLPGQKRKMSHRGRIRLTGSRGL*WAGLAQ
Trigger: TTGGGCAAGTCCTGCCCACCATAGGCCTCTGCTACC...TGTGAGCCTTATCCGACCCCTGTGGCTCATTTTTCTCTTCTGACCTGGCAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp AGGAGGCCCCGTGCCACTGAGCATCCAGAAATAAACCACAACATGGACAGGCTTCAGGAGAGGCTAGATTaGCATCAGCCTGAAGGCACC +
Preference number: 4 (lower is better)
Translates to: RRPRATEHPEINHNMDRLQERLD*HQPEGT
Trigger: GGTGCCTTCAGGCTGATGCCAATCTAGCCTCTCCTG...AAGCCTGTCCATGTTGTGGTTTATTTCTGGATGCTCAGTGGCACGGGGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGGCAGGTCCCATGCTGCGAATCCATGGGGCTTTaGCATCACCAGATGAAAAAT +
Preference number: 4 (lower is better)
Translates to: QIPAQTAATLSCWQVPCCESMGL*HHQMKN
Trigger: ATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTC...GCAGCATGGGACCTGCCAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GAGGAGGGCTCCTTTGAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCCTGCACCTGAATCCATaGGGCTTTGGCATCACCAGA +
Preference number: 4 (lower is better)
Translates to: EEGSFEHMLAWDSSQGVCLHLNP*GFGITR
Trigger: TCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAG...GCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTCAAAGGAGCCCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGCCTTGAACAAAGGGGAAGATTCCCAGCCCAGCTGCTCTTAGACATGAACAGGATGACAACCTGTCTTTaGAGGAGGCCCCGTGCCACT +
Preference number: 4 (lower is better)
Translates to: GLEQRGRFPAQLLLDMNRMTTCL*RRPRAT
Trigger: AGTGGCACGGGGCCTCCTCCAAAGACAGGTTGTCAT...CCTGTTCATGTCTAAGAGCAGCTGGGCTGGGAATCTTCCCCTTTGTTCAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GGCCTTGAACAAAGGGGAAGATTCCCAGCCCAGCTGCTCTTAGACATGAACAGGCCCTCCATCAAAGAGTaGAACTCCCCAGAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: GLEQRGRFPAQLLLDMNRPSIKE*NSPEPH
Trigger: ATGGGGCTCTGGGGAGTTCCACTCTTTGATGGAGGG...CCTGTTCATGTCTAAGAGCAGCTGGGCTGGGAATCTTCCCCTTTGTTCAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CAGGAGAGGCTAGATTGGCATCAGCCTGAAGGCACCACTGGCAGGAACATCTGTAGGGATTGGGGTTCTTaGTCGCTGAGATGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: QERLDWHQPEGTTGRNICRDWGS*SLRCER
Trigger: CCTCTCACATCTCAGCGACCAAGAACCCCAATCCCT...ACAGATGTTCCTGCCAGTGGTGCCTTCAGGCTGATGCCAATCTAGCCTCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp TCTTCTGCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATGAGGCACATAGCCAGGTCAGCTaGGGCCCTTTCCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: SSAPESMGLWHHQMKNEAHSQVS*GPFPPQ
Trigger: CTGGGGTGGGAAAGGGCCCCAGCTGACCTGGCTATG...TGCCTCATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CATCAGCCTGAAGGCACCACTGGCAGGAACATCTGTAGGCTGGTTTGGCACAACGTATGTGAACAAGGTTaGCACACAGGCCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: HQPEGTTGRNICRLVWHNVCEQG*HTGLTL
Trigger: GAGGGTGAGGCCTGTGTGCCAACCTTGTTCACATAC...GTTGTGCCAAACCAGCCTACAGATGTTCCTGCCAGTGGTGCCTTCAGGCTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp AGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGACACAAGGTGCGGGTTaGAGTAGAGTTGAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: SSFCLFRWALAWAQPLGWTQGAG*SRVERG
Trigger: GCCCCTTTCAACTCTACTTCAACCCGCACCTTGTGT...CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR TCA 90 bp GCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATGAGGCATACGCCAGATTGGCATCAGCCTaGAGGCACCACTGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: APESMGLWHHQMKNEAYARLASA*RHHWQE
Trigger: TTCCTGCCAGTGGTGCCTTCAGGCTGATGCCAATCT...GGCGTATGCCTCATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp TGCAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGAGACGAAGGTGGTATGTaGACAAGGTTGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: CSSFCLFRWALAWAQPLGDEGGM*TRLAHR
Trigger: CCTGTGTGCCAACCTTGTTCACATACCACCTTCGTC...TCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp ATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTAGCCCTCTTCCAGCATaGGGCAGTAGCGGAACACGA +
Preference number: 4 (lower is better)
Translates to: ILFIQVGPCMGPAFRMGFSPLPA*GSSGTR
Trigger: TCGTGTTCCGCTACTGCCGCATGCTGGAAGAGGGCT...AAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR GCA 90 bp TTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTTATTCAGGTGGGCCCTTaGATGGGCCCAGCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: FCLFRWALAWAQPLGWVFIQVGP*MGPAFR
Trigger: CCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAAT...AAAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR GCA 90 bp GGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGCTCTAACAACAAGGAAAGCTaGCAGGTCAGAAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: GSAVSRWSGYCQLGPCCSNNKES*QVRREK
Trigger: TTTTTCTCTTCTGACCTGGCAGCTTTCCTTGTTGTT...AGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp TCTTCTGCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATGAGGCATGCCTCCAGGCTGGTTaGGGAAGACGTCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SSAPESMGLWHHQMKNEACLQAG*GRRPPG
Trigger: TCCTGGAGGACGTCTTCCCCAACCAGCCTGGAGGCA...TGCCTCATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp AAGCTGCCAGGTCAGAAGAGAAAAATGAGCCACAGGGGTCGGATAAGGCTCACAGGGTCATGGGTAGGATaGAAGCTGCCAGAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: KLPGQKRKMSHRGRIRLTGSWVG*KLPEAS
Trigger: AGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCC...TGTGAGCCTTATCCGACCCCTGTGGCTCATTTTTCTCTTCTGACCTGGCAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp GCCTTACTGGAAGGCCTTGAACAAAGGGGAAGATTCCCAGCCCAGCTGCTCTTAAGGCATAGAAGGATGTaGCCAGGTGAGATGGGGAAG +
Preference number: 4 (lower is better)
Translates to: ALLEGLEQRGRFPAQLLLRHRRM*PGEMGK
Trigger: CTTCCCCATCTCACCTGGCCACATCCTTCTATGCCT...TAAGAGCAGCTGGGCTGGGAATCTTCCCCTTTGTTCAAGGCCTTCCAGTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp AGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGTCTGCCAGGCAACCATaGGCAGTTTCTTTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: SSFCLFRWALAWAQPLGWSARQP*AVSLPS
Trigger: AGAGGGCAAAGAAACTGCCCATGGTTGCCTGGCAGA...CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGTCTGCCAGGCAACCATaGGCAGTTTCTTTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: QLILFIQVGPCMGPAFRMSARQP*AVSLPS
Trigger: AGAGGGCAAAGAAACTGCCCATGGTTGCCTGGCAGA...CATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp TTTCTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTACTGCACCTGAATCCATaGGGCTTTGGCATCACCAGA +
Preference number: 4 (lower is better)
Translates to: FLPQVGVMGRMEAARSLLLHLNP*GFGITR
Trigger: TCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAG...TAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp CAGGAGAGGCTAGATTGGCATCAGCCTGAAGGCACCACTGGCAGGAACATCTGTGAGCACATGTTAGCATaGGACTCTTCCCAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: QERLDWHQPEGTTGRNICEHMLA*DSSQGV
Trigger: AACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTC...ACAGATGTTCCTGCCAGTGGTGCCTTCAGGCTGATGCCAATCTAGCCTCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp AGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGAGGGATTGGGGTTCTTaGTCGCTGAGATGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: SSFCLFRWALAWAQPLGWRDWGS*SLRCER
Trigger: CCTCTCACATCTCAGCGACCAAGAACCCCAATCCCT...CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp TGCAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGAAATGGACACAGGATCTaGGAGGGCAGCAAACTGGCT +
Preference number: 4 (lower is better)
Translates to: CSSFCLFRWALAWAQPLGNGHRI*EGSKLA
Trigger: AGCCAGTTTGCTGCCCTCCCAGATCCTGTGTCCATT...TCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp TGGCCCTCTTCTGCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATAGAAGAGGAAGTTGGTaGCGAGCCTCCAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: WPSSAPESMGLWHHQMKNRRGSW*RASRPG
Trigger: TCCAGGTCTGGAGGCTCGTCACCAACTTCCTCTTCT...ATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAGAAGAGGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318109.12
CDS-3UTR TCA 90 bp TTTCTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTATCACCAGATGAAAAATaGGGCATACGCCCACCTGTC +
Preference number: 4 (lower is better)
Translates to: FLPQVGVMGRMEAARSLLSPDEK*GIRPPV
Trigger: GACAGGTGGGCGTATGCCTCATTTTTCATCTGGTGA...TAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGCTTACTGGAAGGCCTTaGACAAAGGGGAAGATTCCC +
Preference number: 4 (lower is better)
Translates to: QLILFIQVGPCMGPAFRMLTGRP*TKGKIP
Trigger: GGGAATCTTCCCCTTTGTTCAAGGCCTTCCAGTAAG...CATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp AAGCTGCCAGGTCAGAAGAGAAAAATGAGCCACAGGGGTCGGATAAGGCTCACAAGAGGAGGGCTCCTTTaGGCACATGTTAGCATGGGA +
Preference number: 4 (lower is better)
Translates to: KLPGQKRKMSHRGRIRLTRGGLL*AHVSMG
Trigger: TCCCATGCTAACATGTGCTCAAAGGAGCCCTCCTCT...TGTGAGCCTTATCCGACCCCTGTGGCTCATTTTTCTCTTCTGACCTGGCAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp TCTTCTGCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATGAGGCATCGGCCGCTAGTCCCTaGCACGCCATTGAACCTTCT +
Preference number: 4 (lower is better)
Translates to: SSAPESMGLWHHQMKNEASAASP*HAIEPS
Trigger: AGAAGGTTCAATGGCGTGGCAGGGACTAGCGGCCGA...TGCCTCATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp ATTCCCAGCCCAGCTGCTCTTAGACATGAACAGGTTTCATTGCTGAGGTGTTTGATTCAGGTGGGCCCTTaGATGGGCCCAGCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: IPSPAALRHEQVSLLRCLIQVGP*MGPAFR
Trigger: CCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAAT...CAAACACCTCAGCAATGAAACCTGTTCATGTCTAAGAGCAGCTGGGCTGGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR GCA 90 bp TCTTCTGCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATGAGGCAAGATGGGGAAGCCAGTaGTGTGGGCCAAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: SSAPESMGLWHHQMKNEARWGSQ*CGPRDC
Trigger: GCAGTCTCTTGGCCCACAGCACTGGCTTCCCCATCT...TGCCTCATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp ATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTACGAGCCTCCAGACCTaGAACTTCCGGAACACAAGG +
Preference number: 4 (lower is better)
Translates to: ILFIQVGPCMGPAFRMGFTSLQT*NFRNTR
Trigger: CCTTGTGTTCCGGAAGTTCCAGGTCTGGAGGCTCGT...AAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp ATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTGGGTCATGGGTAGGATaGAAGCTGCCAGAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: ILFIQVGPCMGPAFRMGFGSWVG*KLPEAS
Trigger: AGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCC...AAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CCA 90 bp GTTACCATGAAAATGACAACCTGTCTTTGGAGGAGGCCCCGTGCCACTGAGCATTTCTGTTTATTCAGGTaGGCCCTTGCATGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VTMKMTTCLWRRPRATEHFCLFR*ALAWAQ
Trigger: CTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA...ATGCTCAGTGGCACGGGGCCTCCTCCAAAGACAGGTTGTCATTTTCATGGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp AGGAGGCCCCGTGCCACTGAGCATCCAGAAATAAACCACAACATGGACAGGCTTCTCAAAAGCTCTGCCTaGCAACCTGTGAGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: RRPRATEHPEINHNMDRLLKSSA*QPVSSK
Trigger: CTTTGAGCTCACAGGTTGCCAGGCAGAGCTTTTGAG...AAGCCTGTCCATGTTGTGGTTTATTTCTGGATGCTCAGTGGCACGGGGCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp AAAGCTGCCAGGTCAGAAGAGAAAAATGAGCCACAGGGGTCGGATAAGGCTCACATCTGTAGGCTGGTTTaGCACAACCTAGGAGACGCC +
Preference number: 4 (lower is better)
Translates to: KAARSEEKNEPQGSDKAHICRLV*HNLGDA
Trigger: GGCGTCTCCTAGGTTGTGCCAAACCAGCCTACAGAT...GTGAGCCTTATCCGACCCCTGTGGCTCATTTTTCTCTTCTGACCTGGCAGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp TTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTTCATCTCCACAAGGTCTaGCTACAACACGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FCLFRWALAWAQPLGWVFHLHKV*LQHGGQ
Trigger: CTGCCCTCCGTGTTGTAGCCAGACCTTGTGGAGATG...AAAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp AAGCTGCCAGGTCAGAAGAGAAAAATGAGCCACAGGGGTCGGATAAGGCTCACAACAGCTGGGCCTTACTaGAAGGCCTTGAACAAAGGG +
Preference number: 4 (lower is better)
Translates to: KLPGQKRKMSHRGRIRLTTAGPY*KALNKG
Trigger: CCCTTTGTTCAAGGCCTTCCAGTAAGGCCCAGCTGT...TGTGAGCCTTATCCGACCCCTGTGGCTCATTTTTCTCTTCTGACCTGGCAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp TTTGAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCGAGCACATGTTAGCATaGGACTCTTCCCAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: FEHMLAWDSSQGVCTQGLEHMLA*DSSQGV
Trigger: AACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTC...GAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp AAAGCTGCCAGGTCAGAAGAGAAAAATGAGCCACAGGGGTCGGATAAGGCTCACAGGGATTGGGGTTCTTaGTCGCTGAGATGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: KAARSEEKNEPQGSDKAHRDWGS*SLRCER
Trigger: CCTCTCACATCTCAGCGACCAAGAACCCCAATCCCT...GTGAGCCTTATCCGACCCCTGTGGCTCATTTTTCTCTTCTGACCTGGCAGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp TTTGAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGTTTGTTCTGTCCATaGGGTAGGAACCTCGGCAAT +
Preference number: 4 (lower is better)
Translates to: FEHMLAWDSSQGVCTQGLCLFCP*GRNLGN
Trigger: ATTGCCGAGGTTCCTACCTCATGGACAGAACAAACA...GAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp CAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGTGTTTGTTCTGTCCATaGGGTAGGAACCTCGGCAAT +
Preference number: 4 (lower is better)
Translates to: QLILFIQVGPCMGPAFRMCLFCP*GRNLGN
Trigger: ATTGCCGAGGTTCCTACCTCATGGACAGAACAAACA...CATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp AGGAGGCCCCGTGCCACTGAGCATCCAGAAATAAACCACAACATGGACAGGCTTTGTTTGTTCTGTCCATaGGGTAGGAACCTCGGCAAT +
Preference number: 4 (lower is better)
Translates to: RRPRATEHPEINHNMDRLCLFCP*GRNLGN
Trigger: ATTGCCGAGGTTCCTACCTCATGGACAGAACAAACA...AAGCCTGTCCATGTTGTGGTTTATTTCTGGATGCTCAGTGGCACGGGGCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp AAGCTGCCAGGTCAGAAGAGAAAAATGAGCCACAGGGGTCGGATAAGGCTCACACTTACTGGAAGGCCTTaGACAAAGGGGAAGATTCCC +
Preference number: 4 (lower is better)
Translates to: KLPGQKRKMSHRGRIRLTLTGRP*TKGKIP
Trigger: GGGAATCTTCCCCTTTGTTCAAGGCCTTCCAGTAAG...TGTGAGCCTTATCCGACCCCTGTGGCTCATTTTTCTCTTCTGACCTGGCAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp TGGCCCTCTTCTGCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATAGAGGAGGGCTCCTTTaGGCACATGTTAGCATGGGA +
Preference number: 4 (lower is better)
Translates to: WPSSAPESMGLWHHQMKNRGGLL*AHVSMG
Trigger: TCCCATGCTAACATGTGCTCAAAGGAGCCCTCCTCT...ATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAGAAGAGGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCGAATCCATGGGGCTTTaGCATCACCAGATGAAAAAT +
Preference number: 4 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLESMGL*HHQMKN
Trigger: ATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTC...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp AAGCTGCCAGGTCAGAAGAGAAAAATGAGCCACAGGGGTCGGATAAGGCTCACAGAGCACATGTTAGCATaGGACTCTTCCCAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: KLPGQKRKMSHRGRIRLTEHMLA*DSSQGV
Trigger: AACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTC...TGTGAGCCTTATCCGACCCCTGTGGCTCATTTTTCTCTTCTGACCTGGCAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp TGGCCCTCTTCTGCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATGTATGTGAACAAGGTTaGCACACAGGCCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: WPSSAPESMGLWHHQMKNVCEQG*HTGLTL
Trigger: GAGGGTGAGGCCTGTGTGCCAACCTTGTTCACATAC...ATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAGAAGAGGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp ACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCCCTCCATCAAAGAGTGGAAAACAGGTTTCATTGCTaGGGTGTTTGTTCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: TLPREFALRASALHQRVENRFHC*GVCSVH
Trigger: ATGGACAGAACAAACACCTCAGCAATGAAACCTGTT...TTCCACTCTTTGATGGAGGGCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp ATTCCCAGCCCAGCTGCTCTTAGACATGAACAGGTTTCATTGCTGAGGTGTTTGCAGCTCCAGCCTTACTaGAGAGAATGGGCACAGATC +
Preference number: 4 (lower is better)
Translates to: IPSPAALRHEQVSLLRCLQLQPY*REWAQI
Trigger: GATCTGTGCCCATTCTCTTCAGTAAGGCTGGAGCTG...CAAACACCTCAGCAATGAAACCTGTTCATGTCTAAGAGCAGCTGGGCTGGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp ATTCCCAGCCCAGCTGCTCTTAGACATGAACAGGTTTCATTGCTGAGGTGTTTGTTCTGTTTATTCAGGTaGGCCCTTGCATGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: IPSPAALRHEQVSLLRCLFCLFR*ALAWAQ
Trigger: CTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA...CAAACACCTCAGCAATGAAACCTGTTCATGTCTAAGAGCAGCTGGGCTGGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp TTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTTTTTGGCATCACCAGATaGAAAATGAGGCATACGCCC +
Preference number: 4 (lower is better)
Translates to: FCLFRWALAWAQPLGWVFFGITR*KMRHTP
Trigger: GGGCGTATGCCTCATTTTTCATCTGGTGATGCCAAA...AAAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA
49% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR TCA 90 bp AGGAGGCCCCGTGCCACTGAGCATCCAGAAATAAACCACAACATGGACAGGCTTAACAGGTTTCATTGCTaGGGTGTTTGTTCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: RRPRATEHPEINHNMDRLNRFHC*GVCSVH
Trigger: ATGGACAGAACAAACACCTCAGCAATGAAACCTGTT...AAGCCTGTCCATGTTGTGGTTTATTTCTGGATGCTCAGTGGCACGGGGCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CCA 90 bp AGGAGGCCCCGTGCCACTGAGCATCCAGAAATAAACCACAACATGGACAGGCTTGAATCCATGGGGCTTTaGCATCACCAGATGAAAAAT +
Preference number: 4 (lower is better)
Translates to: RRPRATEHPEINHNMDRLESMGL*HHQMKN
Trigger: ATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTC...AAGCCTGTCCATGTTGTGGTTTATTTCTGGATGCTCAGTGGCACGGGGCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS GCA 90 bp GCCCGCGTCACCGCCGGCACCTGCAGGAACTCGGCCGCTAGTCCCTaGCACGCCATTGAACCTTCTCAAGCACGCGTGGCCCAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: ARVTAGTCRNSAASP*HAIEPSQARVAQPA
Trigger: TGCTGGCTGGGCCACGCGTGCTTGAGAAGGTTCAATGGCGTGGCAGGGACTAGCGGCCGAGTTCCTGCAGGTGCCGGCGGTGACGCGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290730.11
ENST00000625630.2
CDS CCA 90 bp GTCCCTCTCTGGCATGGCTGTGTTGGCCCCAGGACCAACACAGGCTaGACGCCGAGGCGCCCTAGCCCGAGGTTCCAGAGCCTGCGGGAA +
Preference number: 5 (lower is better)
Translates to: VPLWHGCVGPRTNTG*TPRRPSPRFQSLRE
Trigger: TTCCCGCAGGCTCTGGAACCTCGGGCTAGGGCGCCTCGGCGTCCAGCCTGTGTTGGTCCTGGGGCCAACACAGCCATGCCAGAGAGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290730.11
ENST00000625630.2
CDS-3UTR CAA 90 bp CCAGTCCTGTGTGGGCACTGCTGGGCTGTCGCCAGCCTGGGTGCAGGAGGGCTGAGCAGGCCGAAGAAGTaGACCCTCACCCGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: PVLCGHCWAVASLGAGGLSRPKK*TLTRGL
Trigger: CAGCCCTCGGGTGAGGGTCAACTTCTTCGGCCTGCT...CAGCCCTCCTGCACCCAGGCTGGCGACAGCCCAGCAGTGCCCACACAGGACTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318109.12
CDS GCA 90 bp TCCCTGGGCCGCCCTGGCTCTGCTGTGTCCAGATGGTCAGGCTACTaGCAGCTGGGGCCTTGCTGCTCTGAAGTCCCCTGTCAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: SLGRPGSAVSRWSGY*QLGPCCSEVPCQGG
Trigger: GCCACCCTGACAGGGGACTTCAGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCCAGGGCGGCCCAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464023.1
ENST00000627316.1
CDS-3UTR CAA 90 bp AGCAGCTTTCTGTGGGGAGGGGCCCGTGTTGAGCACAGGCCAGCACAGGTCCCCAGCAGGCCGAAGAAGTaGACCCTCACCCGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: SSFLWGGARVEHRPAQVPSRPKK*TLTRGL
Trigger: CAGCCCTCGGGTGAGGGTCAACTTCTTCGGCCTGCT...GGGGACCTGTGCTGGCCTGTGCTCAACACGGGCCCCTCCCCACAGAAAGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000476077.1
ENST00000628868.1
CDS CCA 90 bp GCCGCCCTGGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTaGGGCCTTGCTGCTCTGAAGTCCCCTGTCAGGGTGGCTGATGAG +
Preference number: 5 (lower is better)
Translates to: AALALLCPDGQATAS*GLAALKSPVRVADE
Trigger: CTCATCAGCCACCCTGACAGGGGACTTCAGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCCAGGGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464023.1
ENST00000627316.1
CDS GCA 90 bp ACACAGGCTGGACGCCGAGGCGCCCTAGCCCGAGGTTCCAGAGCCTaGGGGAAGGATACGGTCATAAGGACGCCCCCGAAGAGAAACATG +
Preference number: 5 (lower is better)
Translates to: TQAGRRGALARGSRA*GKDTVIRTPPKRNM
Trigger: CATGTTTCTCTTCGGGGGCGTCCTTATGACCGTATCCTTCCCGCAGGCTCTGGAACCTCGGGCTAGGGCGCCTCGGCGTCCAGCCTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290730.11
ENST00000625630.2
CDS-3UTR CAA 90 bp CCTGGGTGCAGGAGGGCTGTTCTAGCTCCAGTGGCACCCATAGCCAGGTCAGCTTTGCCTCCAGGCTGGTaGGGGAAGACGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PGCRRAVLAPVAPIARSALPPGW*GKTSSR
Trigger: CCTGGAGGACGTCTTCCCCAACCAGCCTGGAGGCAA...AGCTGACCTGGCTATGGGTGCCACTGGAGCTAGAACAGCCCTCCTGCACCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp GGCACAGATCCGGGCACAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGTTGCCTCCAGGCTGGTaGGGGAAGACGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GTDPGTDPSTDCCHPQLLLPPGW*GKTSSR
Trigger: CCTGGAGGACGTCTTCCCCAACCAGCCTGGAGGCAA...CAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTGTGCCCGGATCTGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp ATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGTGGGGGTTGCCACCCTCAGCTGTaGGCAGGTCCCATGCTGCCA +
Preference number: 5 (lower is better)
Translates to: MGRMEAARSLLGLALGGGCHPQL*AGPMLP
Trigger: TGGCAGCATGGGACCTGCCAACAGCTGAGGGTGGCA...ACCCCCACCCAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGTTGCCTCCAGGCTGGTaGGGGAAGACGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LSSSQLPSACSPSRPRELLPPGW*GKTSSR
Trigger: CCTGGAGGACGTCTTCCCCAACCAGCCTGGAGGCAA...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR CAA 90 bp CCCTGGCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTGCTGAATGACAACCTGTCTTaGGAGGAGGCCCCGTGCCAC +
Preference number: 5 (lower is better)
Translates to: PWLCCVQMVRLLPAGALLNDNLS*EEAPCH
Trigger: GTGGCACGGGGCCTCCTCCAAAGACAGGTTGTCATT...CAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGAGCAGGCCGAAGAAGTaGACCCTCACCCGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: LSSSQLPSACSPSRPRELSRPKK*TLTRGL
Trigger: CAGCCCTCGGGTGAGGGTCAACTTCTTCGGCCTGCT...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS CCA 90 bp CAACACATACTAAGCTGGAGACAGCGACTGTGTCCCTCTCTGGCATaGCTGTGTTGGCCCCAGGACCAACACAGGCTGGACGCCGAGGCG +
Preference number: 5 (lower is better)
Translates to: QHILSWRQRLCPSLA*LCWPQDQHRLDAEA
Trigger: CGCCTCGGCGTCCAGCCTGTGTTGGTCCTGGGGCCAACACAGCCATGCCAGAGAGGGACACAGTCGCTGTCTCCAGCTTAGTATGTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290730.11
ENST00000625630.2
CDS-3UTR CAA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTTGCCTCCAGGCTGGTaGGGGAAGACGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PSRPRELRRVAVRLRARGLPPGW*GKTSSR
Trigger: CCTGGAGGACGTCTTCCCCAACCAGCCTGGAGGCAA...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR CAA 90 bp CTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCTTGCCTCCAGGCTGGTaGGGGAAGACGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LPQVGVMGRMEAARSLLGLPPGW*GKTSSR
Trigger: CCTGGAGGACGTCTTCCCCAACCAGCCTGGAGGCAA...GCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CAA 90 bp CCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGCTCTTCCCAGGGAGTTaGCACTCAGGGCCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: PQVGVMGRMEAARSLLGLLFPGS*HSGPLP
Trigger: GGGCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAG...CAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp CCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGTGCCACCCTCAGCTGTaGGCAGGTCCCATGCTGCCA +
Preference number: 5 (lower is better)
Translates to: PQVGVMGRMEAARSLLGLCHPQL*AGPMLP
Trigger: TGGCAGCATGGGACCTGCCAACAGCTGAGGGTGGCA...CAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp CCTGGGTGCAGGAGGGCTGTTCTAGCTCCAGTGGCACCCATAGCCAGGTCAGCTTGCCAGCTCTTGGAGTaGACACGGTACAGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PGCRRAVLAPVAPIARSACQLLE*TRYREE
Trigger: CTCCTCCCTGTACCGTGTCAACTCCAAGAGCTGGCA...AGCTGACCTGGCTATGGGTGCCACTGGAGCTAGAACAGCCCTCCTGCACCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS TCA 90 bp AGACGTCCTCCAGGAAGTAGTAGATATGGCCCACCGCAATCCCTGTaGGACAGCCACGGACTGTGGGGTCACCCTCCACAGCCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: RRPPGSSRYGPPQSL*DSHGLWGHPPQPRV
Trigger: GACTCTGGGCTGTGGAGGGTGACCCCACAGTCCGTGGCTGTCTCACAGGGATTGCGGTGGGCCATATCTACTACTTCCTGGAGGACGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS CCA 90 bp ACCCCTGCAGCTGAGCACAGAGTGGGCCCTCAACACATACTAAGCTaGAGACAGCGACTGTGTCCCTCTCTGGCATGGCTGTGTTGGCCC +
Preference number: 5 (lower is better)
Translates to: TPAAEHRVGPQHILS*RQRLCPSLAWLCWP
Trigger: GGGCCAACACAGCCATGCCAGAGAGGGACACAGTCGCTGTCTCCAGCTTAGTATGTGTTGAGGGCCCACTCTGTGCTCAGCTGCAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290730.11
ENST00000625630.2
CDS-3UTR CAA 90 bp ATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCCTGGGTGGGGGTCGGGTTGAAGTAGAGTaGAAAGGGGCTGAGGAGCTC +
Preference number: 5 (lower is better)
Translates to: MGRMEAARSLLGLALGGGRVEVE*KGAEEL
Trigger: GAGCTCCTCAGCCCCTTTCAACTCTACTTCAACCCG...ACCCCCACCCAGGGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476077.1
ENST00000628868.1
CDS-3UTR CAA 90 bp CCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGTCCACGAGGATGGAGTaGCCCAGCAGCAGCGAGAAG +
Preference number: 5 (lower is better)
Translates to: PQVGVMGRMEAARSLLGLSTRME*PSSSEK
Trigger: CTTCTCGCTGCTGCTGGGCAACTCCATCCTCGTGGA...CAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CAA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCCACGAGGATGGAGTaGCCCAGCAGCAGCGAGAAG +
Preference number: 5 (lower is better)
Translates to: PSRPRELRRVAVRLRARGSTRME*PSSSEK
Trigger: CTTCTCGCTGCTGCTGGGCAACTCCATCCTCGTGGA...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR CAA 90 bp GAGGAGGGCTCCTTTGAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCTATGGTGGGCAGGACTaGCCCAAGGCCCTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: EEGSFEHMLAWDSSQGVCYGGQD*PKALVG
Trigger: CCCCACCAGGGCCTTGGGCAAGTCCTGCCCACCATA...GCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTCAAAGGAGCCCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp GAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCCTCTTCCCAGGGAGTTaGCACTCAGGGCCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: EHMLAWDSSQGVCTQGLCLFPGS*HSGPLP
Trigger: GGGCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAG...GCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp CTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCGCCTGGTGCCAGCTCTaGGAGTTGACACGGTACAGG +
Preference number: 5 (lower is better)
Translates to: LPQVGVMGRMEAARSLLGAWCQL*ELTRYR
Trigger: CCTGTACCGTGTCAACTCCAAGAGCTGGCACCAGGC...GCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCAGCAGGCCGAAGAAGTaGACCCTCACCCGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLSRPKK*TLTRGL
Trigger: CAGCCCTCGGGTGAGGGTCAACTTCTTCGGCCTGCT...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR CAA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCTCCACGAGGATGGAGTaGCCCAGCAGCAGCGAGAAG +
Preference number: 5 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLSTRME*PSSSEK
Trigger: CTTCTCGCTGCTGCTGGGCAACTCCATCCTCGTGGA...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR CAA 90 bp ACCACTGGCAGGAACATCTGTAGGCTGGTTTGGCACAACCTAGGAGACGCCTGTTTGCCTCCAGGCTGGTaGGGGAAGACGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: TTGRNICRLVWHNLGDACLPPGW*GKTSSR
Trigger: CCTGGAGGACGTCTTCCCCAACCAGCCTGGAGGCAA...ACAGGCGTCTCCTAGGTTGTGCCAAACCAGCCTACAGATGTTCCTGCCAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp CAGGAGAGGCTAGATTGGCATCAGCCTGAAGGCACCACTGGCAGGAACATCTGTGGGATGGAAGGAACCTaGGCTGCCTCACCCCACAGG +
Preference number: 5 (lower is better)
Translates to: QERLDWHQPEGTTGRNICGMEGT*AASPHR
Trigger: CCTGTGGGGTGAGGCAGCCAAGGTTCCTTCCATCCC...ACAGATGTTCCTGCCAGTGGTGCCTTCAGGCTGATGCCAATCTAGCCTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp CAAGGGGACAGCTGGGCCTTACTGGAAGGCCTTGAACAAAGGGGAAGATTCCCATGCCACCCTCAGCTGTaGGCAGGTCCCATGCTGCCA +
Preference number: 5 (lower is better)
Translates to: QGDSWALLEGLEQRGRFPCHPQL*AGPMLP
Trigger: TGGCAGCATGGGACCTGCCAACAGCTGAGGGTGGCA...TGGGAATCTTCCCCTTTGTTCAAGGCCTTCCAGTAAGGCCCAGCTGTCCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCCGGGTTGAAGTAGAGTaGAAAGGGGCTGAGGAGCTC +
Preference number: 5 (lower is better)
Translates to: PSRPRELRRVAVRLRARGRVEVE*KGAEEL
Trigger: GAGCTCCTCAGCCCCTTTCAACTCTACTTCAACCCG...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR CAA 90 bp TGCAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATTGCCTCCAGGCTGGTaGGGGAAGACGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: CSSFCLFRWALAWAQPLGLPPGW*GKTSSR
Trigger: CCTGGAGGACGTCTTCCCCAACCAGCCTGGAGGCAA...TCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CAA 90 bp CTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTGCCTCCAGGCTGGTaGGGGAAGACGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LILFIQVGPCMGPAFRMGLPPGW*GKTSSR
Trigger: CCTGGAGGACGTCTTCCCCAACCAGCCTGGAGGCAA...ACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CAA 90 bp GGAGGTGTCCCCATTCTTCAGAATGGACACAGGATCTGGGAGGGCAGCAAACTGCCATGGGCAGTTTCTTaGCCCTCTGTGGGCACCCCT +
Preference number: 5 (lower is better)
Translates to: GGVPILQNGHRIWEGSKLPWAVS*PSVGTP
Trigger: AGGGGTGCCCACAGAGGGCAAAGAAACTGCCCATGG...CAGTTTGCTGCCCTCCCAGATCCTGTGTCCATTCTGAAGAATGGGGACACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp GAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCAATGACAACCTGTCTTaGGAGGAGGCCCCGTGCCAC +
Preference number: 5 (lower is better)
Translates to: EHMLAWDSSQGVCTQGLCNDNLS*EEAPCH
Trigger: GTGGCACGGGGCCTCCTCCAAAGACAGGTTGTCATT...GCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp TTTGAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCGGGATGGAAGGAACCTaGGCTGCCTCACCCCACAGG +
Preference number: 5 (lower is better)
Translates to: FEHMLAWDSSQGVCTQGLGMEGT*AASPHR
Trigger: CCTGTGGGGTGAGGCAGCCAAGGTTCCTTCCATCCC...GAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp GGCACAGATCCGGGCACAGATCCCAGCACAGACTGCTGCCACCCTCAGCTGTTGCCTTACTGGAAGGCCTaGAACAAAGGGGAAGATTCC +
Preference number: 5 (lower is better)
Translates to: GTDPGTDPSTDCCHPQLLPYWKA*NKGEDS
Trigger: GGAATCTTCCCCTTTGTTCAAGGCCTTCCAGTAAGG...CAACAGCTGAGGGTGGCAGCAGTCTGTGCTGGGATCTGTGCCCGGATCTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp TTTGAGCACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCCTCTTCCCAGGGAGTTaGCACTCAGGGCCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: FEHMLAWDSSQGVCTQGLLFPGS*HSGPLP
Trigger: GGGCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAG...GAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTGCTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp TTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCTCCGGGTTGAAGTAGAGTaGAAAGGGGCTGAGGAGCTC +
Preference number: 5 (lower is better)
Translates to: FQTQRAEKSSCEAQGKRLRVEVE*KGAEEL
Trigger: GAGCTCCTCAGCCCCTTTCAACTCTACTTCAACCCG...GAGCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000406855.7
ENST00000620697.3
CDS-3UTR CAA 90 bp CAGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGTCCACGAGGATGGAGTaGCCCAGCAGCAGCGAGAAG +
Preference number: 5 (lower is better)
Translates to: QLILFIQVGPCMGPAFRMSTRME*PSSSEK
Trigger: CTTCTCGCTGCTGCTGGGCAACTCCATCCTCGTGGA...CATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CAA 90 bp AGCTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGTCCACGAGGATGGAGTaGCCCAGCAGCAGCGAGAAG +
Preference number: 5 (lower is better)
Translates to: SSFCLFRWALAWAQPLGWSTRME*PSSSEK
Trigger: CTTCTCGCTGCTGCTGGGCAACTCCATCCTCGTGGA...CCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CAA 90 bp GCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATGAGGCATACGCCGGGATGGAAGGAACCTaGGCTGCCTCACCCCACAGG +
Preference number: 5 (lower is better)
Translates to: APESMGLWHHQMKNEAYAGMEGT*AASPHR
Trigger: CCTGTGGGGTGAGGCAGCCAAGGTTCCTTCCATCCC...GGCGTATGCCTCATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp TTTCTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGCCTGGTGCCAGCTCTaGGAGTTGACACGGTACAGG +
Preference number: 5 (lower is better)
Translates to: FLPQVGVMGRMEAARSLLAWCQL*ELTRYR
Trigger: CCTGTACCGTGTCAACTCCAAGAGCTGGCACCAGGC...TAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp ATTCCCAGCCCAGCTGCTCTTAGACATGAACAGGTTTCATTGCTGAGGTGTTTGTATGGTGGGCAGGACTaGCCCAAGGCCCTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: IPSPAALRHEQVSLLRCLYGGQD*PKALVG
Trigger: CCCCACCAGGGCCTTGGGCAAGTCCTGCCCACCATA...CAAACACCTCAGCAATGAAACCTGTTCATGTCTAAGAGCAGCTGGGCTGGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp CTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTAATGACAACCTGTCTTaGGAGGAGGCCCCGTGCCAC +
Preference number: 5 (lower is better)
Translates to: LILFIQVGPCMGPAFRMGNDNLS*EEAPCH
Trigger: GTGGCACGGGGCCTCCTCCAAAGACAGGTTGTCATT...ACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp CTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCCTTACTGGAAGGCCTaGAACAAAGGGGAAGATTCC +
Preference number: 5 (lower is better)
Translates to: LPQVGVMGRMEAARSLLGPYWKA*NKGEDS
Trigger: GGAATCTTCCCCTTTGTTCAAGGCCTTCCAGTAAGG...GCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp GCCTTACTGGAAGGCCTTGAACAAAGGGGAAGATTCCCAGCCCAGCTGCTCTTATGCCAGCTCTTGGAGTaGACACGGTACAGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: ALLEGLEQRGRFPAQLLLCQLLE*TRYREE
Trigger: CTCCTCCCTGTACCGTGTCAACTCCAAGAGCTGGCA...TAAGAGCAGCTGGGCTGGGAATCTTCCCCTTTGTTCAAGGCCTTCCAGTAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp TTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTTAGCAGGCCGAAGAAGTaGACCCTCACCCGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: FCLFRWALAWAQPLGWVFSRPKK*TLTRGL
Trigger: CAGCCCTCGGGTGAGGGTCAACTTCTTCGGCCTGCT...AAAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CAA 90 bp TTTCTGCCCCAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTACGGGTTGAAGTAGAGTaGAAAGGGGCTGAGGAGCTC +
Preference number: 5 (lower is better)
Translates to: FLPQVGVMGRMEAARSLLRVEVE*KGAEEL
Trigger: GAGCTCCTCAGCCCCTTTCAACTCTACTTCAACCCG...TAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTGGGGCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318109.12
ENST00000476077.1
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CAA 90 bp CTCAGCTCCTCTCAGCTCCCCTCAGCCTGTTCTCCTTCCAGACCCAGAGAGCTGAACACGAAGAGCATGTaGAAGAAGAAGCTGAATCCC +
Preference number: 5 (lower is better)
Translates to: LSSSQLPSACSPSRPRELNTKSM*KKKLNP
Trigger: GGGATTCAGCTTCTTCTTCAACATGCTCTTCGTGTT...CAGCTCTCTGGGTCTGGAAGGAGAACAGGCTGAGGGGAGCTGAGAGGAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR CAA 90 bp TTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTTCCATGGGCAGTTTCTTaGCCCTCTGTGGGCACCCCT +
Preference number: 5 (lower is better)
Translates to: FCLFRWALAWAQPLGWVFPWAVS*PSVGTP
Trigger: AGGGGTGCCCACAGAGGGCAAAGAAACTGCCCATGG...AAAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCAACACGAAGAGCATGTaGAAGAAGAAGCTGAATCCC +
Preference number: 5 (lower is better)
Translates to: PSRPRELRRVAVRLRARGNTKSM*KKKLNP
Trigger: GGGATTCAGCTTCTTCTTCAACATGCTCTTCGTGTT...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000406855.7
ENST00000614504.3
ENST00000620697.3
CDS-3UTR CAA 90 bp CAAGTAGGGGTCATGGGTAGGATGGAAGCTGCCAGAAGCCTCTTAGGCCTGGCCAACACGAAGAGCATGTaGAAGAAGAAGCTGAATCCC +
Preference number: 5 (lower is better)
Translates to: QVGVMGRMEAARSLLGLANTKSM*KKKLNP
Trigger: GGGATTCAGCTTCTTCTTCAACATGCTCTTCGTGTT...GGCCAGGCCTAAGAGGCTTCTGGCAGCTTCCATCCTACCCATGACCCCTACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CAA 90 bp TCTTCTGCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATGAGGCACCATGGGCAGTTTCTTaGCCCTCTGTGGGCACCCCT +
Preference number: 5 (lower is better)
Translates to: SSAPESMGLWHHQMKNEAPWAVS*PSVGTP
Trigger: AGGGGTGCCCACAGAGGGCAAAGAAACTGCCCATGG...TGCCTCATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp TTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTTTGCCAGCTCTTGGAGTaGACACGGTACAGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: FCLFRWALAWAQPLGWVFCQLLE*TRYREE
Trigger: CTCCTCCCTGTACCGTGTCAACTCCAAGAGCTGGCA...AAAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp CCTTCCAGACCCAGAGAGCTGAGAAGAGTAGCTGTGAGGCTCAGGGCAAGAGGCCATGAACAGGTTTCATaGCTGAGGTGTTTGTTCTGT +
Preference number: 5 (lower is better)
Translates to: PSRPRELRRVAVRLRARGHEQVS*LRCLFC
Trigger: ACAGAACAAACACCTCAGCAATGAAACCTGTTCATG...GCCTCTTGCCCTGAGCCTCACAGCTACTCTTCTCAGCTCTCTGGGTCTGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp TCTTCTGCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATGAGGCACGGGTTGAAGTAGAGTaGAAAGGGGCTGAGGAGCTC +
Preference number: 5 (lower is better)
Translates to: SSAPESMGLWHHQMKNEARVEVE*KGAEEL
Trigger: GAGCTCCTCAGCCCCTTTCAACTCTACTTCAACCCG...TGCCTCATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318109.12
CDS-3UTR CAA 90 bp CATCAGCCTGAAGGCACCACTGGCAGGAACATCTGTAGGCTGGTTTGGCACAACAACACGAAGAGCATGTaGAAGAAGAAGCTGAATCCC +
Preference number: 5 (lower is better)
Translates to: HQPEGTTGRNICRLVWHNNTKSM*KKKLNP
Trigger: GGGATTCAGCTTCTTCTTCAACATGCTCTTCGTGTT...GTTGTGCCAAACCAGCCTACAGATGTTCCTGCCAGTGGTGCCTTCAGGCTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp CACATGTTAGCATGGGACTCTTCCCAGGGAGTTTGCACTCAGGGCCTCTGCCCTCATGAACAGGTTTCATaGCTGAGGTGTTTGTTCTGT +
Preference number: 5 (lower is better)
Translates to: HMLAWDSSQGVCTQGLCPHEQVS*LRCLFC
Trigger: ACAGAACAAACACCTCAGCAATGAAACCTGTTCATG...AGGGCAGAGGCCCTGAGTGCAAACTCCCTGGGAAGAGTCCCATGCTAACATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp CTCATTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTAACACGAAGAGCATGTaGAAGAAGAAGCTGAATCCC +
Preference number: 5 (lower is better)
Translates to: LILFIQVGPCMGPAFRMGNTKSM*KKKLNP
Trigger: GGGATTCAGCTTCTTCTTCAACATGCTCTTCGTGTT...ACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS-3UTR CAA 90 bp TCTTCTGCACCTGAATCCATGGGGCTTTGGCATCACCAGATGAAAAATGAGGCACCTTACTGGAAGGCCTaGAACAAAGGGGAAGATTCC +
Preference number: 5 (lower is better)
Translates to: SSAPESMGLWHHQMKNEAPYWKA*NKGEDS
Trigger: GGAATCTTCCCCTTTGTTCAAGGCCTTCCAGTAAGG...TGCCTCATTTTTCATCTGGTGATGCCAAAGCCCCATGGATTCAGGTGCAGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000614504.3
CDS-3UTR CAA 90 bp TTCTGTTTATTCAGGTGGGCCCTTGCATGGGCCCAGCCTTTAGGATGGGTTTTTAACACGAAGAGCATGTaGAAGAAGAAGCTGAATCCC +
Preference number: 5 (lower is better)
Translates to: FCLFRWALAWAQPLGWVFNTKSM*KKKLNP
Trigger: GGGATTCAGCTTCTTCTTCAACATGCTCTTCGTGTT...AAAAACCCATCCTAAAGGCTGGGCCCATGCAAGGGCCCACCTGAATAAACAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318109.12
ENST00000404056.1
ENST00000476077.1
ENST00000614504.3
ENST00000628868.1
ENST00000631305.2
CDS GCA 72 bp GGACGCCGAGGCGCCCTAGCCCGAGGTTCCAGAGCCTaGGGGAAGGATACGGTCATAAGGACGCCCCCGAAG +
Preference number: 6 (lower is better)
Translates to: GRRGALARGSRA*GKDTVIRTPPK
Trigger: CTTCGGGGGCGTCCTTATGACCGTATCCTTCCCGCAGGCTCTGGAACCTCGGGCTAGGGCGCCTCGGCGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290730.11
ENST00000625630.2
CDS CCA 72 bp TGGCATGGCTGTGTTGGCCCCAGGACCAACACAGGCTaGACGCCGAGGCGCCCTAGCCCGAGGTTCCAGAGC +
Preference number: 6 (lower is better)
Translates to: WHGCVGPRTNTG*TPRRPSPRFQS
Trigger: GCTCTGGAACCTCGGGCTAGGGCGCCTCGGCGTCCAGCCTGTGTTGGTCCTGGGGCCAACACAGCCATGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290730.11
ENST00000625630.2
CDS CAA 90 bp CCGCCGGCACCTGCAGGAACTCGGCCGCTAGTCCCTGCCACGCCATaGAACCTTCTCAAGCACGCGTGGCCCAGCCAGCAACGCGCTCTT +
Preference number: 6 (lower is better)
Translates to: PPAPAGTRPLVPATP*NLLKHAWPSQQRAL
Trigger: AAGAGCGCGTTGCTGGCTGGGCCACGCGTGCTTGAGAAGGTTCAATGGCGTGGCAGGGACTAGCGGCCGAGTTCCTGCAGGTGCCGGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290730.11
ENST00000625630.2
CDS GCA 72 bp ACCGCCGGCACCTGCAGGAACTCGGCCGCTAGTCCCTaGCACGCCATTGAACCTTCTCAAGCACGCGTGGCC +
Preference number: 6 (lower is better)
Translates to: TAGTCRNSAASP*HAIEPSQARVA
Trigger: GGCCACGCGTGCTTGAGAAGGTTCAATGGCGTGGCAGGGACTAGCGGCCGAGTTCCTGCAGGTGCCGGCGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290730.11
ENST00000476077.1
ENST00000625630.2
ENST00000628868.1
CDS CAA 72 bp CCCACCGCAATCCCCAGCAGGTCCACGAGGATGGAGTaGCCCAGCAGCAGCGAGAAGCCCATGAGCGCCCAA +
Preference number: 6 (lower is better)
Translates to: PTAIPSRSTRME*PSSSEKPMSAQ
Trigger: TTGGGCGCTCATGGGCTTCTCGCTGCTGCTGGGCAACTCCATCCTCGTGGACCTGCTGGGGATTGCGGTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000290730.11
ENST00000318109.12
ENST00000406855.7
ENST00000464110.1
ENST00000476077.1
ENST00000488272.5
ENST00000620697.3
ENST00000625630.2
ENST00000626238.1
ENST00000626854.2
ENST00000628868.1
ENST00000631305.2
CDS GCA 72 bp GTGTCCAGATGGTCAGGCTACTGCCAGCTGGGGCCTTaGTGCTCTGAAGTCCCAGGAAGCCAGGGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: VSRWSGYCQLGP*CSEVPGSQGSA
Trigger: TGCAGACCCCTGGCTTCCTGGGACTTCAGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406855.7
ENST00000620697.3
CDS CCA 72 bp GCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTaGGGCCTTGCTGCTCTGAAGTCCCAGGAAGCCAGG +
Preference number: 6 (lower is better)
Translates to: ALLCPDGQATAS*GLAALKSQEAR
Trigger: CCTGGCTTCCTGGGACTTCAGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406855.7
ENST00000620697.3
CDS CCA 72 bp GCTCTGCTGTGTCCAGATGGTCAGGCTACTGCCAGCTaGGGCCTTGCTGCTCTGAAGTCCCCTGTCAGGGTG +
Preference number: 6 (lower is better)
Translates to: ALLCPDGQATAS*GLAALKSPVRV
Trigger: CACCCTGACAGGGGACTTCAGAGCAGCAAGGCCCCAGCTGGCAGTAGCCTGACCATCTGGACACAGCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464023.1
ENST00000627316.1
CDS CAA 72 bp AAGAAGCTGAATCCCAGGGGCCCGAAGAAGAGGAAGTaGGTGACGAGCCTCCAGACCTACGGGGGACGGGCG +
Preference number: 6 (lower is better)
Translates to: KKLNPRGPKKRK*VTSLQTYGGRA
Trigger: CGCCCGTCCCCCGTAGGTCTGGAGGCTCGTCACCAACTTCCTCTTCTTCGGGCCCCTGGGATTCAGCTTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS CAA 90 bp ATGTTGAAGAAGAAGCTGAATCCCAGGGGCCCGAAGAAGAGGAAGTaGGTGACGAGCCTCCAGACCTACGGGGGACGGGCGGTCAGGTGC +
Preference number: 6 (lower is better)
Translates to: MLKKKLNPRGPKKRK*VTSLQTYGGRAVRC
Trigger: GCACCTGACCGCCCGTCCCCCGTAGGTCTGGAGGCTCGTCACCAACTTCCTCTTCTTCGGGCCCCTGGGATTCAGCTTCTTCTTCAACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS TCA 72 bp CCAGGAAGTAGTAGATATGGCCCACCGCAATCCCTGTaGGACAGCCACGGACTGTGGGGTCACCCTCCACAG +
Preference number: 6 (lower is better)
Translates to: PGSSRYGPPQSL*DSHGLWGHPPQ
Trigger: CTGTGGAGGGTGACCCCACAGTCCGTGGCTGTCTCACAGGGATTGCGGTGGGCCATATCTACTACTTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404056.1
ENST00000614504.3
CDS CCA 72 bp GCTGAGCACAGAGTGGGCCCTCAACACATACTAAGCTaGAGACAGCGACTGTGTCCCTCTCTGGCATGGCTG +
Preference number: 6 (lower is better)
Translates to: AEHRVGPQHILS*RQRLCPSLAWL
Trigger: CAGCCATGCCAGAGAGGGACACAGTCGCTGTCTCCAGCTTAGTATGTGTTGAGGGCCCACTCTGTGCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290730.11
ENST00000625630.2