RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DEPTOR (Homo sapiens)

Ensembl gene IDs: ENSG00000155792

Ensembl transcript IDs: ENST00000286234.6, ENST00000518057.1, ENST00000523492.5

Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTaGATTGCTTTGTGTCATTCTGGCTTCCCTCACCCACAGGCCACT +
Preference number: 1 (lower is better)
Translates to: DSYVQNHPFAWQSCL*IALCHSGFPHPQAT
Trigger: AGTGGCCTGTGGGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
3UTR CCA 90 bp TGTATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCATTTGCATaGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCT +
Preference number: 1 (lower is better)
Translates to: CMCGEDSYVQNHPFA*QSCLCIALCHSGFP
Trigger: AGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTCTTCTCCGCACATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
3UTR GCA 90 bp GACATGTATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCATTTaGATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTT +
Preference number: 1 (lower is better)
Translates to: DMYVRRRLVCPKPSI*MAILSLHCFVSFWL
Trigger: AAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTCTTCTCCGCACATACATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
3UTR CCA 90 bp CCATTATTTGGAATGAAGAATTTAGTATTTCCTGACTGCCTAATTTaGCACTTTGAGGAATTTCCTCTGCACGCTGAGCCCCAAAATGCA +
Preference number: 1 (lower is better)
Translates to: PLFGMKNLVFPDCLI*HFEEFPLHAEPQNA
Trigger: TGCATTTTGGGGCTCAGCGTGCAGAGGAAATTCCTCAAAGTGCCAAATTAGGCAGTCAGGAAATACTAAATTCTTCATTCCAAATAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286234.6
3UTR-3UTR CCA 90 bp TCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTTCACCCACAGGCCACTaGAGGGCTGGGAGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: SKTIHLHGNLVFALLCVISPTGH*RAGRPR
Trigger: CCTGGGCCTCCCAGCCCTCCAGTGGCCTGTGGGTGA...AATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
3UTR-3UTR CCA 90 bp GATACCCGGTTCTTCCACATTCAGTGTATAAAACTCAACTTTAGACATGTATGTTCACCCACAGGCCACTaGAGGGCTGGGAGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: DTRFFHIQCIKLNFRHVCSPTGH*RAGRPR
Trigger: CCTGGGCCTCCCAGCCCTCCAGTGGCCTGTGGGTGA...ACATACATGTCTAAAGTTGAGTTTTATACACTGAATGTGGAAGAACCGGGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
3UTR CAA 90 bp AGACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTaGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCCACAGGCCAC +
Preference number: 2 (lower is better)
Translates to: RLVCPKPSICMAILS*HCFVSFWLPSPTGH
Trigger: GTGGCCTGTGGGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
3UTR CAA 90 bp CGGAGAAGACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTaGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCCACA +
Preference number: 2 (lower is better)
Translates to: RRRLVCPKPSICMAI*SLHCFVSFWLPSPT
Trigger: TGTGGGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTCTTCTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
3UTR CAA 90 bp AGACATGTATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCATTaGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCT +
Preference number: 2 (lower is better)
Translates to: RHVCAEKTRMSKTIH*HGNLVFALLCVILA
Trigger: AGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTCTTCTCCGCACATACATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
3UTR-3UTR CCA 90 bp GCTACAAATAGAAATCTAGTAAGGCAGTTCTATCATGTAGGAAAATGGTTTCCCTGCTTTGTGTCATTCTaGCTTCCCTCACCCACAGGC +
Preference number: 2 (lower is better)
Translates to: ATNRNLVRQFYHVGKWFPCFVSF*LPSPTG
Trigger: GCCTGTGGGTGAGGGAAGCCAGAATGACACAAAGCA...GGGAAACCATTTTCCTACATGATAGAACTGCCTTACTAGATTTCTATTTGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
3UTR CCA 72 bp ATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTaGCTTCCCTCACCCACAGGCCACTGGAGGGCTGGG +
Preference number: 3 (lower is better)
Translates to: MAILSLHCFVSF*LPSPTGHWRAG
Trigger: CCCAGCCCTCCAGTGGCCTGTGGGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
3UTR GCA 72 bp GTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTaGATTGCTTTGTGTCATTCTGGCTTCCCTCACCCA +
Preference number: 3 (lower is better)
Translates to: VQNHPFAWQSCL*IALCHSGFPHP
Trigger: TGGGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
3UTR-3UTR CAA 90 bp GGGGACTTTAGCATGTCGCTGTTTGGGCTAGAGAAGCATTTCAACACCTTTCTGTCCAAAACCATCCATTaGCATGGCAATCTTGTCTTT +
Preference number: 3 (lower is better)
Translates to: GDFSMSLFGLEKHFNTFLSKTIH*HGNLVF
Trigger: AAAGACAAGATTGCCATGCAAATGGATGGTTTTGGA...CAGAAAGGTGTTGAAATGCTTCTCTAGCCCAAACAGCGACATGCTAAAGTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286234.6
3UTR CCA 72 bp GGAGAAGACTCGTATGTCCAAAACCATCCATTTGCATaGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCT +
Preference number: 3 (lower is better)
Translates to: GEDSYVQNHPFA*QSCLCIALCHS
Trigger: AGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTCTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
3UTR-3UTR CAA 90 bp AAACTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTATGTCCAAAACCATCATTTGCATGGCAATCTaGTCTTTGCATTGCTTTGTG +
Preference number: 3 (lower is better)
Translates to: KLNFRHVCAEKTRMSKTIICMAI*SLHCFV
Trigger: CACAAAGCAATGCAAAGACAAGATTGCCATGCAAAT...GATGGTTTTGGACATACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp TTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCCGCTCCAGCTCCCTTTaGTGCGCCCCGCCACTCCCG +
Preference number: 4 (lower is better)
Translates to: LHGNLVFALLCVILASLTRSSSL*CAPPLP
Trigger: CGGGAGTGGCGGGGCGCAGCAAAGGGAGCTGGAGCG...GGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp GCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCCACAGGCCACTCCCGCTGGTGCTaGTGTCACTGCCAGCACTGC +
Preference number: 4 (lower is better)
Translates to: AILSLHCFVSFWLPSPTGHSRWC*CHCQHC
Trigger: GCAGTGCTGGCAGTGACAGCAGCACCAGCGGGAGTG...GCCTGTGGGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp CTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCATCGCTCCAGCTCCCTTTaGTGCGCCCCGCCACTCCCG +
Preference number: 4 (lower is better)
Translates to: LNFRHVCAEKTRMSKTIHRSSSL*CAPPLP
Trigger: CGGGAGTGGCGGGGCGCAGCAAAGGGAGCTGGAGCG...ATGGATGGTTTTGGACATACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp ATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCCGTGCGGCTACCACTaGCTCCGCTGTCCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: IHLHGNLVFALLCVILASPCGYH*LRCPPR
Trigger: CCTCGGCGGACAGCGGAGCCAGTGGTAGCCGCACGG...GGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR TCA 90 bp CTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCATGGGTGGGGCTGCTGCTaGAGTAGCCGCTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LNFRHVCAEKTRMSKTIHGWGCC*SSRCCH
Trigger: GTGGCAGCAGCGGCTACTTCAGCAGCAGCCCCACCC...ATGGATGGTTTTGGACATACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp GCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCCACAGGCGTGGCAAAGCTGCTCTaGCTCTTTCCTCGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: AILSLHCFVSFWLPSPTGVAKLL*LFPRGG
Trigger: GCCACCACGAGGAAAGAGGCAGAGCAGCTTTGCCAC...GCCTGTGGGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp GCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCCACAGGCAGCCGGTGGCAAAGCTaGTCTGCCTCTTTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: AILSLHCFVSFWLPSPTGSRWQS*SASFLV
Trigger: CACGAGGAAAGAGGCAGAGCAGCTTTGCCACCGGCT...GCCTGTGGGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp TTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCCATTCCTGCTGCGGCTaGAGGGCCACTGGGGTCTAC +
Preference number: 4 (lower is better)
Translates to: LHGNLVFALLCVILASLTHSCCG*RATGVY
Trigger: GTAGACCCCAGTGGCCCTGCAGCCGCAGCAGGAATG...GGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp ACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTCCCCGCCACTCCCGCTaGTGCTGCTGTCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: TIHLHGNLVFALLCVILAPRHSR*CCCHCQ
Trigger: CTGGCAGTGACAGCAGCACCAGCGGGAGTGGCGGGG...AGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp TTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCCGGCTGCAGGGCCACTaGGGTCTACAGCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: LHGNLVFALLCVILASLTRLQGH*GLQPGC
Trigger: ACATCCAGGCTGTAGACCCCAGTGGCCCTGCAGCCG...GGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp CTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCATTCACCCACAGGCCACTaGAGGGCTGGGAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LNFRHVCAEKTRMSKTIHSPTGH*RAGRPR
Trigger: CCTGGGCCTCCCAGCCCTCCAGTGGCCTGTGGGTGA...ATGGATGGTTTTGGACATACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR TCA 90 bp GCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCCACAGGCCTGCAGACACGATCTTaGTCTCCTTGCTGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: AILSLHCFVSFWLPSPTGLQTRS*SPCWGS
Trigger: TGAGCCCCAGCAAGGAGATCAAGATCGTGTCTGCAG...GCCTGTGGGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp AAACTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTATGTCCAAAACCATCTCCAGCTCCCTTTGCTaGGCCCCGCCACTCCCGCTG +
Preference number: 4 (lower is better)
Translates to: KLNFRHVCAEKTRMSKTISSSLC*APPLPL
Trigger: CAGCGGGAGTGGCGGGGCGCAGCAAAGGGAGCTGGA...GATGGTTTTGGACATACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp TCAACTTTAGACATGTATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCATTTCCAGCTCCCTTTGCTaGGCCCCGCCACTCCCGCTG +
Preference number: 4 (lower is better)
Translates to: STLDMYVRRRLVCPKPSISSSLC*APPLPL
Trigger: CAGCGGGAGTGGCGGGGCGCAGCAAAGGGAGCTGGA...AATGGATGGTTTTGGACATACGAGTCTTCTCCGCACATACATGTCTAAAGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp GCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCCACAGGCTGCCACAGCTGCTCATaGTGCTTCTCCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: AILSLHCFVSFWLPSPTGCHSCS*CFSSLQ
Trigger: CTGCAGTGAGGAGAAGCAGCATGAGCAGCTGTGGCA...GCCTGTGGGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp CCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCAGGCCACTGGAGGGCTaGGAGGCCCAGGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PKPSICMAILSLHCFVSFRPLEG*EAQELS
Trigger: GCTGAGCTCCTGGGCCTCCCAGCCCTCCAGTGGCCT...GAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR TCA 90 bp CACATTCAGTGTATAAAACTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTGGGTGGGGCTGCTGCTaGAGTAGCCGCTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: HIQCIKLNFRHVCAEKTRGWGCC*SSRCCH
Trigger: GTGGCAGCAGCGGCTACTTCAGCAGCAGCCCCACCC...ACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAGTTTTATACACTGAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp ATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTGTGCTCGGATCAGTCTaGCCTCACAGACGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: MCGEDSYVQNHPFAWQSCVLGSV*PHRRFP
Trigger: CGGGAAGCGTCTGTGAGGGCAGACTGATCCGAGCAC...ACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTCTTCTCCGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp ATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTATGGTTTTAGGGCCGTaGGGCTACCACTGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: MCGEDSYVQNHPFAWQSCMVLGP*GYHWLR
Trigger: GCGGAGCCAGTGGTAGCCGCACGGCCCTAAAACCAT...ACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTCTTCTCCGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp GTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTGCCAGCACTGCCAGTaGTGCCGCCCTCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: VQNHPFAWQSCLCIALCHCQHCQ*CRPPPW
Trigger: CCATGGAGGAGGGCGGCAGCACTGGCAGTGCTGGCA...ATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp GTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTGCCAGCACTGCCAGTaGTGCCGCCCTCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: VCPKPSICMAILSLHCFVCQHCQ*CRPPPW
Trigger: CCATGGAGGAGGGCGGCAGCACTGGCAGTGCTGGCA...CACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp ATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCTGTCACTGCCAGCACTaGCAGTGCTGCCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: IHLHGNLVFALLCVILASCHCQH*QCCRPP
Trigger: AGGAGGGCGGCAGCACTGGCAGTGCTGGCAGTGACA...GGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp GCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCCACAGGCTGCTGGATGATGCCATaGTCCATAAGCCGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: AILSLHCFVSFWLPSPTGCWMMP*SISRWQ
Trigger: TTGCCACCGGCTTATGGAGCATGGCATCATCCAGCA...GCCTGTGGGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp CTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCATCATTCCTGCTGCGGCTaGAGGGCCACTGGGGTCTAC +
Preference number: 4 (lower is better)
Translates to: LNFRHVCAEKTRMSKTIHHSCCG*RATGVY
Trigger: GTAGACCCCAGTGGCCCTGCAGCCGCAGCAGGAATG...ATGGATGGTTTTGGACATACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp TTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCACAGACCTTCATTCCTaGTGCGGCTGCAGGGCCACT +
Preference number: 4 (lower is better)
Translates to: LHGNLVFALLCVILASLTTDLHS*CGCRAT
Trigger: AGTGGCCCTGCAGCCGCAGCAGGAATGAAGGTCTGT...GGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp GCTACAAATAGAAATCTAGTAAGGCAGTTCTATCATGTAGGAAAATGGTTTCCCCCGTGCGGCTACCACTaGCTCCGCTGTCCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: ATNRNLVRQFYHVGKWFPPCGYH*LRCPPR
Trigger: CCTCGGCGGACAGCGGAGCCAGTGGTAGCCGCACGG...GGGAAACCATTTTCCTACATGATAGAACTGCCTTACTAGATTTCTATTTGTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp TATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTAGGCCACTGGAGGGCTaGGAGGCCCAGGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: YVQNHPFAWQSCLCIALCRPLEG*EAQELS
Trigger: GCTGAGCTCCTGGGCCTCCCAGCCCTCCAGTGGCCT...ACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR TCA 90 bp ATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCAGGTGCGCTCATACTTaGCCCCTTCCTCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: IHLHGNLVFALLCVILASRCAHT*PLPPPW
Trigger: CCAGGGAGGAGGAAGGGGTCAAGTATGAGCGCACCT...GGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp GTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATCGCCGAGGGTTTGGGTaGTCGGATCAGTCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: VQNHPFAWQSCLCIALCHRRGFG*SDQSAL
Trigger: GAGGGCAGACTGATCCGAGCACCCAAACCCTCGGCG...ATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp ATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCTGTCACTGCCAGCACTaGCAGTGCTGCCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: MSKTIHLHGNLVFALLCVCHCQH*QCCRPP
Trigger: AGGAGGGCGGCAGCACTGGCAGTGCTGGCAGTGACA...GACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp ACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTGGTGCTGCTGTCACTaGCAGCACTGCCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: TIHLHGNLVFALLCVILAWCCCH*QHCQCC
Trigger: GCAGCACTGGCAGTGCTGGCAGTGACAGCAGCACCA...AGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp CCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCCACTCCCGCTGGTGCTaGTGTCACTGCCAGCACTGC +
Preference number: 4 (lower is better)
Translates to: PKPSICMAILSLHCFVSFHSRWC*CHCQHC
Trigger: GCAGTGCTGGCAGTGACAGCAGCACCAGCGGGAGTG...GAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp GGGGACTTTAGCATGTCGCTGTTTGGGCTAGAGAAGCATTTCAACACCTTTCTGTGCTGGATGATGCCATaGTCCATAAGCCGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: GDFSMSLFGLEKHFNTFLCWMMP*SISRWQ
Trigger: TTGCCACCGGCTTATGGAGCATGGCATCATCCAGCA...CAGAAAGGTGTTGAAATGCTTCTCTAGCCCAAACAGCGACATGCTAAAGTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS-3UTR CCA 90 bp ACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTGTCCGCCGAGGGTTTaGGTGCTCGGATCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: TIHLHGNLVFALLCVILACPPRV*VLGSVC
Trigger: GCAGACTGATCCGAGCACCCAAACCCTCGGCGGACA...AGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp ATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTTCTTCAGCACGGACTTaGGGTTGCAGAGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: MCGEDSYVQNHPFAWQSCSSART*GCRAQG
Trigger: CCCCTGTGCTCTGCAACCCCAAGTCCGTGCTGAAGA...ACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTCTTCTCCGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR TCA 90 bp GAGAAGACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCACAGAAGGGACTGTCATaGGTTTCCTGGGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: EKTRMSKTIHLHGNLVFAQKGLS*VSWEEG
Trigger: CCCCTCCTCCCAGGAAACTCATGACAGTCCCTTCTG...TGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR TCA 90 bp GCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCCACAGGCATTTCCTCTGCACGCTaGGCCCCAAAATGCACTATT +
Preference number: 4 (lower is better)
Translates to: AILSLHCFVSFWLPSPTGISSAR*APKCTI
Trigger: AATAGTGCATTTTGGGGCTCAGCGTGCAGAGGAAAT...GCCTGTGGGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS-3UTR GCA 90 bp GAAGACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGTGCTCGGATCAGTCTaGCCTCACAGACGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: EDSYVQNHPFAWQSCLCIVLGSV*PHRRFP
Trigger: CGGGAAGCGTCTGTGAGGGCAGACTGATCCGAGCAC...AATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp TATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCGCCGAGGGTTTGGGTaGTCGGATCAGTCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: YVQNHPFAWQSCLCIALCRRGFG*SDQSAL
Trigger: GAGGGCAGACTGATCCGAGCACCCAAACCCTCGGCG...ACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp GCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCCACAGGCATAACCTTTTCTTCGTaGAGCCTGAGCCGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: AILSLHCFVSFWLPSPTGITFSS*SLSRSC
Trigger: ACAGCTACGGCTCAGGCTGCACGAAGAAAAGGTTAT...GCCTGTGGGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS-3UTR GCA 90 bp TTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCCACAGCTGCTCATGCTaGTTCTCCTCACTGCAGACA +
Preference number: 4 (lower is better)
Translates to: LHGNLVFALLCVILASLTHSCSC*FSSLQT
Trigger: TGTCTGCAGTGAGGAGAAGCAGCATGAGCAGCTGTG...GGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp ACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTACAGACCTTCATTCCTaGTGCGGCTGCAGGGCCACT +
Preference number: 4 (lower is better)
Translates to: TIHLHGNLVFALLCVILATDLHS*CGCRAT
Trigger: AGTGGCCCTGCAGCCGCAGCAGGAATGAAGGTCTGT...AGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp GCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCCACAGGCTTGAGGAATTTCCTCTaGACGCTGAGCCCCAAAATG +
Preference number: 4 (lower is better)
Translates to: AILSLHCFVSFWLPSPTGLRNFL*TLSPKM
Trigger: CATTTTGGGGCTCAGCGTGCAGAGGAAATTCCTCAA...GCCTGTGGGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS-3UTR CCA 90 bp ATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTGCCTCTTTCCTCGTaGTGGCCTCACCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: MCGEDSYVQNHPFAWQSCLPLSS*WPHLPE
Trigger: TTCAGGAAGGTGAGGCCACCACGAGGAAAGAGGCAG...ACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTCTTCTCCGCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp ATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTTGCTCCATAAGCCGGTaGCAAAGCTGCTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: MCGEDSYVQNHPFAWQSCCSISR*QSCSAS
Trigger: AGAGGCAGAGCAGCTTTGCCACCGGCTTATGGAGCA...ACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTCTTCTCCGCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp TTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCTCTACAGCCTGGATGTaGCATGGCTTACTTCCTCGC +
Preference number: 4 (lower is better)
Translates to: LHGNLVFALLCVILASLTSTAWM*HGLLPR
Trigger: GCGAGGAAGTAAGCCATGCCACATCCAGGCTGTAGA...GGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR TCA 90 bp TCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTGTAGCTGTTCCCCGGTaGCCAAGACCTCAGCCATGC +
Preference number: 4 (lower is better)
Translates to: SKTIHLHGNLVFALLCVIVAVPR*PRPQPC
Trigger: GCATGGCTGAGGTCTTGGTCACCGGGGAACAGCTAC...AATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR TCA 90 bp GAAGACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTCAGAAGGGACTGTCATaGGTTTCCTGGGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: EDSYVQNHPFAWQSCLCIQKGLS*VSWEEG
Trigger: CCCCTCCTCCCAGGAAACTCATGACAGTCCCTTCTG...AATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR TCA 90 bp CCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCGGAGTTCCTCAGAGGTaGCAGGTCTCTTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: PKPSICMAILSLHCFVSFGVPQR*QVSSAR
Trigger: CCGTGCTGAAGAGACCTGTCACCTCTGAGGAACTCC...GAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp TATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTTGGTGCTGCTGTCACTaGCAGCACTGCCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: YVQNHPFAWQSCLCIALCWCCCH*QHCQCC
Trigger: GCAGCACTGGCAGTGCTGGCAGTGACAGCAGCACCA...ACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp ATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCTGCCACAGCTGCTCATaGTGCTTCTCCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: IHLHGNLVFALLCVILASCHSCS*CFSSLQ
Trigger: CTGCAGTGAGGAGAAGCAGCATGAGCAGCTGTGGCA...GGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp TCAACTTTAGACATGTATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCATTCGCTGCTGCCACAGCTaGTCATGCTGCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: STLDMYVRRRLVCPKPSIRCCHS*SCCFSS
Trigger: TGAGGAGAAGCAGCATGAGCAGCTGTGGCAGCAGCG...AATGGATGGTTTTGGACATACGAGTCTTCTCCGCACATACATGTCTAAAGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp ATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCGTGAATGTCTTCCTTaGATACGGAGCCCCGGGAGT +
Preference number: 4 (lower is better)
Translates to: IHLHGNLVFALLCVILASRECLP*IRSPGS
Trigger: ACTCCCGGGGCTCCGTATGCAAGGAAGACATTCACG...GGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp GAGAAGACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCACGTGAATGTCTTCCTTaGATACGGAGCCCCGGGAGT +
Preference number: 4 (lower is better)
Translates to: EKTRMSKTIHLHGNLVFARECLP*IRSPGS
Trigger: ACTCCCGGGGCTCCGTATGCAAGGAAGACATTCACG...TGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp TATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTTGTCCGCCGAGGGTTTaGGTGCTCGGATCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: YVQNHPFAWQSCLCIALCCPPRV*VLGSVC
Trigger: GCAGACTGATCCGAGCACCCAAACCCTCGGCGGACA...ACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp CTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCATTGCTCCATAAGCCGGTaGCAAAGCTGCTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LNFRHVCAEKTRMSKTIHCSISR*QSCSAS
Trigger: AGAGGCAGAGCAGCTTTGCCACCGGCTTATGGAGCA...ATGGATGGTTTTGGACATACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp ACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTCTTCAGCACGGACTTaGGGTTGCAGAGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: TRMSKTIHLHGNLVFALLSSART*GCRAQG
Trigger: CCCCTGTGCTCTGCAACCCCAAGTCCGTGCTGAAGA...AAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp ATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCAGCCTGGATGTGGCATaGCTTACTTCCTCGCACCAC +
Preference number: 4 (lower is better)
Translates to: IHLHGNLVFALLCVILASSLDVA*LTSSHH
Trigger: GTGGTGCGAGGAAGTAAGCCATGCCACATCCAGGCT...GGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp GATACCCGGTTCTTCCACATTCAGTGTATAAAACTCAACTTTAGACATGTATGTCGGCTGCAGGGCCACTaGGGTCTACAGCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: DTRFFHIQCIKLNFRHVCRLQGH*GLQPGC
Trigger: ACATCCAGGCTGTAGACCCCAGTGGCCCTGCAGCCG...ACATACATGTCTAAAGTTGAGTTTTATACACTGAATGTGGAAGAACCGGGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR TCA 90 bp GCTACAAATAGAAATCTAGTAAGGCAGTTCTATCATGTAGGAAAATGGTTTCCCGTAGCTGTTCCCCGGTaGCCAAGACCTCAGCCATGC +
Preference number: 4 (lower is better)
Translates to: ATNRNLVRQFYHVGKWFPVAVPR*PRPQPC
Trigger: GCATGGCTGAGGTCTTGGTCACCGGGGAACAGCTAC...GGGAAACCATTTTCCTACATGATAGAACTGCCTTACTAGATTTCTATTTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp CACATTCAGTGTATAAAACTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTGTGGCAAAGCTGCTCTaGCTCTTTCCTCGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: HIQCIKLNFRHVCAEKTRVAKLL*LFPRGG
Trigger: GCCACCACGAGGAAAGAGGCAGAGCAGCTTTGCCAC...ACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAGTTTTATACACTGAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp ATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTGCTGCTTCTCCTCACTaGAGACACGATCTTGATCTC +
Preference number: 4 (lower is better)
Translates to: MCGEDSYVQNHPFAWQSCAASPH*RHDLDL
Trigger: GAGATCAAGATCGTGTCTGCAGTGAGGAGAAGCAGC...ACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTCTTCTCCGCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp TCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCGCTGCTGCCACAGCTaGTCATGCTGCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SKTIHLHGNLVFALLCVIRCCHS*SCCFSS
Trigger: TGAGGAGAAGCAGCATGAGCAGCTGTGGCAGCAGCG...AATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp AAACTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCCTCTTTCCTCGTGGTaGCCTCACCTTCCTGAACCA +
Preference number: 4 (lower is better)
Translates to: KLNFRHVCAEKTRMSKTIPLSSW*PHLPEP
Trigger: TGGTTCAGGAAGGTGAGGCCACCACGAGGAAAGAGG...GATGGTTTTGGACATACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp CCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCCTGCCTCTTTCCTCGTaGTGGCCTCACCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: PKPSICMAILSLHCFVSFLPLSS*WPHLPE
Trigger: TTCAGGAAGGTGAGGCCACCACGAGGAAAGAGGCAG...GAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp ATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTGATTTCCGATTGTCATaGCTCTGCTTCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: MCGEDSYVQNHPFAWQSCDFRLS*LCFLRQ
Trigger: CTGCCTGAGGAAGCAGAGCCATGACAATCGGAAATC...ACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTCTTCTCCGCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp GAAGACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTAGCCTGGATGTGGCATaGCTTACTTCCTCGCACCAC +
Preference number: 4 (lower is better)
Translates to: EDSYVQNHPFAWQSCLCISLDVA*LTSSHH
Trigger: GTGGTGCGAGGAAGTAAGCCATGCCACATCCAGGCT...AATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp CTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCATCTGGGGTCTACAGCCTaGATGTGGCATGGCTTACTT +
Preference number: 4 (lower is better)
Translates to: LNFRHVCAEKTRMSKTIHLGSTA*MWHGLL
Trigger: AAGTAAGCCATGCCACATCCAGGCTGTAGACCCCAG...ATGGATGGTTTTGGACATACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR TCA 90 bp ATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTGCCGGAAGTTCATTCTaGACTGGTAGAGAAGATTGC +
Preference number: 4 (lower is better)
Translates to: MCGEDSYVQNHPFAWQSCAGSSF*TGREDC
Trigger: GCAATCTTCTCTACCAGTTCAGAATGAACTTCCGGC...ACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTCTTCTCCGCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp TTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCCTGCATGAGTTTAATTaGCGTCTCTCTGTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LHGNLVFALLCVILASLTLHEFN*RLSVRS
Trigger: GCTTCTGACAGAGAGACGGCAATTAAACTCATGCAG...GGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS-3UTR GCA 90 bp TTTAGAACCCCCTTGAAAATGCTAGTGAACAGGTCTTATTCCTTTAAATGTTGCAGCCGGTGGCAAAGCTaGTCTGCCTCTTTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: FRTPLKMLVNRSYSFKCCSRWQS*SASFLV
Trigger: CACGAGGAAAGAGGCAGAGCAGCTTTGCCACCGGCT...GCAACATTTAAAGGAATAAGACCTGTTCACTAGCATTTTCAAGGGGGTTCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS-3UTR GCA 90 bp CCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCCACAGCTGCTCATGCTaGTTCTCCTCACTGCAGACA +
Preference number: 4 (lower is better)
Translates to: PKPSICMAILSLHCFVSFHSCSC*FSSLQT
Trigger: TGTCTGCAGTGAGGAGAAGCAGCATGAGCAGCTGTG...GAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp ACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTCCGTCAGAATCAGATTaGTCACGGTCCGGTAGTCTA +
Preference number: 4 (lower is better)
Translates to: TIHLHGNLVFALLCVILAPSESD*SRSGSL
Trigger: TAGACTACCGGACCGTGAGCAATCTGATTCTGACGG...AGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp CACATTCAGTGTATAAAACTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTCCTCTTTCCTCGTGGTaGCCTCACCTTCCTGAACCA +
Preference number: 4 (lower is better)
Translates to: HIQCIKLNFRHVCAEKTRPLSSW*PHLPEP
Trigger: TGGTTCAGGAAGGTGAGGCCACCACGAGGAAAGAGG...ACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAGTTTTATACACTGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp ATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCGATTTCCGATTGTCATaGCTCTGCTTCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: IHLHGNLVFALLCVILASDFRLS*LCFLRQ
Trigger: CTGCCTGAGGAAGCAGAGCCATGACAATCGGAAATC...GGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR TCA 90 bp AAACTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTATGTCCAAAACCATCTCATCACACACATGGTaGATAATGCCCCGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: KLNFRHVCAEKTRMSKTISSHTW*IMPRSA
Trigger: AGCAGACCGGGGCATTATTCACCATGTGTGTGATGA...GATGGTTTTGGACATACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS-3UTR TCA 90 bp GTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATAGGGGGACTTTTCATTaGGCAGCTCCATCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: VQNHPFAWQSCLCIALCHRGTFH*AAPSVF
Trigger: GAAGACTGATGGAGCTGCTCAATGAAAAGTCCCCCT...ATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR TCA 90 bp CCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCAGGGGGACTTTTCATTaGGCAGCTCCATCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: PKPSICMAILSLHCFVSFRGTFH*AAPSVF
Trigger: GAAGACTGATGGAGCTGCTCAATGAAAAGTCCCCCT...GAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR TCA 90 bp GCTACAAATAGAAATCTAGTAAGGCAGTTCTATCATGTAGGAAAATGGTTTCCCCTGCAGACACGATCTTaGTCTCCTTGCTGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: ATNRNLVRQFYHVGKWFPLQTRS*SPCWGS
Trigger: TGAGCCCCAGCAAGGAGATCAAGATCGTGTCTGCAG...GGGAAACCATTTTCCTACATGATAGAACTGCCTTACTAGATTTCTATTTGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR TCA 90 bp ACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTACAGAGACGACAAACTaGCAGACCTTCATTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TIHLHGNLVFALLCVILATETTN*QTFIPA
Trigger: AGCAGGAATGAAGGTCTGTCAGTTTGTCGTCTCTGT...AGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR TCA 90 bp GCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCCACAGGCGAATTTAGTATTTCCTaGCTGCCTAATTTGGCACTT +
Preference number: 4 (lower is better)
Translates to: AILSLHCFVSFWLPSPTGEFSIS*LPNLAL
Trigger: AAGTGCCAAATTAGGCAGTCAGGAAATACTAAATTC...GCCTGTGGGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS-3UTR GCA 90 bp TTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCCGGTCTGCTAATTTCTaGATGAGTTTAATTGCCGTC +
Preference number: 4 (lower is better)
Translates to: LHGNLVFALLCVILASLTRSANF*MSLIAV
Trigger: GACGGCAATTAAACTCATGCAGAAATTAGCAGACCG...GGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS-3UTR GCA 90 bp ATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCCTGTCCACAAATGGGTaGTTGTTGGACACATGCTGG +
Preference number: 4 (lower is better)
Translates to: MSKTIHLHGNLVFALLCVLSTNG*LLDTCW
Trigger: CCAGCATGTGTCCAACAAGCACCCATTTGTGGACAG...GACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp AAACTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCTGTCCACAAATGGGTaGTTGTTGGACACATGCTGG +
Preference number: 4 (lower is better)
Translates to: KLNFRHVCAEKTRMSKTILSTNG*LLDTCW
Trigger: CCAGCATGTGTCCAACAAGCACCCATTTGTGGACAG...GATGGTTTTGGACATACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp CACATTCAGTGTATAAAACTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTCGATTGTCATGGCTCTaGTTCCTCAGGCAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: HIQCIKLNFRHVCAEKTRRLSWL*FLRQKG
Trigger: TCCCTTCTGCCTGAGGAAGCAGAGCCATGACAATCG...ACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAGTTTTATACACTGAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp TCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCGATTGTCATGGCTCTaGTTCCTCAGGCAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SKTIHLHGNLVFALLCVIRLSWL*FLRQKG
Trigger: TCCCTTCTGCCTGAGGAAGCAGAGCCATGACAATCG...AATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp ACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTCCGTCAGAATCAGATTaGTCACGGTCCGGTAGTCTA +
Preference number: 4 (lower is better)
Translates to: TRMSKTIHLHGNLVFALLPSESD*SRSGSL
Trigger: TAGACTACCGGACCGTGAGCAATCTGATTCTGACGG...AAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp GCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCCACAGGCTGGCAATCTTGTCTTTaGATTGCTTTGTGTCATTCT +
Preference number: 4 (lower is better)
Translates to: AILSLHCFVSFWLPSPTGWQSCL*IALCHS
Trigger: AGAATGACACAAAGCAATGCAAAGACAAGATTGCCA...GCCTGTGGGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp ATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTTTGTTGGACACATGCTaGATGATGCCATGCTCCATA +
Preference number: 4 (lower is better)
Translates to: MCGEDSYVQNHPFAWQSCLLDTC*MMPCSI
Trigger: TATGGAGCATGGCATCATCCAGCATGTGTCCAACAA...ACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTCTTCTCCGCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp TCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTTCTACAGCCTGGATGTaGCATGGCTTACTTCCTCGC +
Preference number: 4 (lower is better)
Translates to: SKTIHLHGNLVFALLCVISTAWM*HGLLPR
Trigger: GCGAGGAAGTAAGCCATGCCACATCCAGGCTGTAGA...AATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp CACATTCAGTGTATAAAACTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTCTGGGGTCTACAGCCTaGATGTGGCATGGCTTACTT +
Preference number: 4 (lower is better)
Translates to: HIQCIKLNFRHVCAEKTRLGSTA*MWHGLL
Trigger: AAGTAAGCCATGCCACATCCAGGCTGTAGACCCCAG...ACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAGTTTTATACACTGAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp CACATTCAGTGTATAAAACTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTTGCTTTGTGTCATTCTaGCTTCCCTCACCCACAGGC +
Preference number: 4 (lower is better)
Translates to: HIQCIKLNFRHVCAEKTRCFVSF*LPSPTG
Trigger: GCCTGTGGGTGAGGGAAGCCAGAATGACACAAAGCA...ACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAGTTTTATACACTGAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
3UTR CAA 72 bp CTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTaGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LVCPKPSICMAI*SLHCFVSFWLP
Trigger: GGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR TCA 90 bp ACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTGCCGGAAGTTCATTCTaGACTGGTAGAGAAGATTGC +
Preference number: 4 (lower is better)
Translates to: TRMSKTIHLHGNLVFALLAGSSF*TGREDC
Trigger: GCAATCTTCTCTACCAGTTCAGAATGAACTTCCGGC...AAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR TCA 90 bp CCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCACAGAGACGACAAACTaGCAGACCTTCATTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PKPSICMAILSLHCFVSFTETTN*QTFIPA
Trigger: AGCAGGAATGAAGGTCTGTCAGTTTGTCGTCTCTGT...GAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR TCA 90 bp GTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATCCTAATTTGGCACTTTaGGGAATTTCCTCTGCACGC +
Preference number: 4 (lower is better)
Translates to: VQNHPFAWQSCLCIALCHPNLAL*GISSAR
Trigger: GCGTGCAGAGGAAATTCCTCAAAGTGCCAAATTAGG...ATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS-3UTR GCA 90 bp GGGGACTTTAGCATGTCGCTGTTTGGGCTAGAGAAGCATTTCAACACCTTTCTGCCAAAAATGAAAACGTaGGTATATACAAGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GDFSMSLFGLEKHFNTFLPKMKT*VYTSEL
Trigger: CAGCTCACTTGTATATACGCACGTTTTCATTTTTGG...CAGAAAGGTGTTGAAATGCTTCTCTAGCCCAAACAGCGACATGCTAAAGTCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS-3UTR CCA 90 bp ATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCATTGCTGTCCACAAATaGGTGCTTGTTGGACACATG +
Preference number: 4 (lower is better)
Translates to: IHLHGNLVFALLCVILASIAVHK*VLVGHM
Trigger: CATGTGTCCAACAAGCACCCATTTGTGGACAGCAAT...GGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp TCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCATGACAATCGTCCGTaGGCCCGTCAGAATCAGATT +
Preference number: 4 (lower is better)
Translates to: SKTIHLHGNLVFALLCVIHDNRP*ARQNQI
Trigger: AATCTGATTCTGACGGGCCCACGGACGATTGTCATG...AATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp ACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTACTGGTAGAGAAGATTaGTGTCCACAAATGGGTGCT +
Preference number: 4 (lower is better)
Translates to: TRMSKTIHLHGNLVFALLTGRED*CPQMGA
Trigger: AGCACCCATTTGTGGACAGCAATCTTCTCTACCAGT...AAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp GATACCCGGTTCTTCCACATTCAGTGTATAAAACTCAACTTTAGACATGTATGTGCTGCTTCTCCTCACTaGAGACACGATCTTGATCTC +
Preference number: 4 (lower is better)
Translates to: DTRFFHIQCIKLNFRHVCAASPH*RHDLDL
Trigger: GAGATCAAGATCGTGTCTGCAGTGAGGAGAAGCAGC...ACATACATGTCTAAAGTTGAGTTTTATACACTGAATGTGGAAGAACCGGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR GCA 90 bp TTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCTTAGTATTTCCTGACTaGCTAATTTGGCACTTTGAG +
Preference number: 4 (lower is better)
Translates to: LHGNLVFALLCVILASLTLVFPD*LIWHFE
Trigger: CTCAAAGTGCCAAATTAGGCAGTCAGGAAATACTAA...GGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS-3UTR CCA 90 bp GTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGCACTTCATTATCCAATaGGAAGGTGCCGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: VCPKPSICMAILSLHCFVHFIIQ*EGAVIL
Trigger: AAGGATGACGGCACCTTCCCATTGGATAATGAAGTG...CACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS-3UTR CCA 90 bp ACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTTGTTGGACACATGCTaGATGATGCCATGCTCCATA +
Preference number: 4 (lower is better)
Translates to: TRMSKTIHLHGNLVFALLLLDTC*MMPCSI
Trigger: TATGGAGCATGGCATCATCCAGCATGTGTCCAACAA...AAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp GTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATATTGCTGTCCACAAATaGGTGCTTGTTGGACACATG +
Preference number: 4 (lower is better)
Translates to: VQNHPFAWQSCLCIALCHIAVHK*VLVGHM
Trigger: CATGTGTCCAACAAGCACCCATTTGTGGACAGCAAT...ATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp TTTAGAACCCCCTTGAAAATGCTAGTGAACAGGTCTTATTCCTTTAAATGTTGCCATGACAATCGTCCGTaGGCCCGTCAGAATCAGATT +
Preference number: 4 (lower is better)
Translates to: FRTPLKMLVNRSYSFKCCHDNRP*ARQNQI
Trigger: AATCTGATTCTGACGGGCCCACGGACGATTGTCATG...GCAACATTTAAAGGAATAAGACCTGTTCACTAGCATTTTCAAGGGGGTTCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS-3UTR TCA 90 bp GTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATAGTTTGGGTAGGTCTTaGGATGATGACGTCTATCTT +
Preference number: 4 (lower is better)
Translates to: VQNHPFAWQSCLCIALCHSLGRS*DDDVYL
Trigger: AAGATAGACGTCATCATCTCAAGACCTACCCAAACT...ATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS-3UTR GCA 90 bp TATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTACTGGTAGAGAAGATTaGTGTCCACAAATGGGTGCT +
Preference number: 4 (lower is better)
Translates to: YVQNHPFAWQSCLCIALCTGRED*CPQMGA
Trigger: AGCACCCATTTGTGGACAGCAATCTTCTCTACCAGT...ACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR TCA 90 bp TTTAGAACCCCCTTGAAAATGCTAGTGAACAGGTCTTATTCCTTTAAATGTTGCCAGACACCTTCAAAGTaGAATCTTGCCAGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: FRTPLKMLVNRSYSFKCCQTPSK*NLARRV
Trigger: AACCCTTCTGGCAAGATTTCACTTTGAAGGTGTCTG...GCAACATTTAAAGGAATAAGACCTGTTCACTAGCATTTTCAAGGGGGTTCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS-3UTR TCA 90 bp TATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTGTGCGTATATACAAGTaGGCTGAAAAGTTACAACAC +
Preference number: 4 (lower is better)
Translates to: YVQNHPFAWQSCLCIALCVRIYK*AEKLQH
Trigger: GTGTTGTAACTTTTCAGCTCACTTGTATATACGCAC...ACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS-3UTR GCA 90 bp GTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTGGCAATCTTGTCTTTaGATTGCTTTGTGTCATTCT +
Preference number: 4 (lower is better)
Translates to: VQNHPFAWQSCLCIALCHWQSCL*IALCHS
Trigger: AGAATGACACAAAGCAATGCAAAGACAAGATTGCCA...ATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CCA 90 bp GCTACAAATAGAAATCTAGTAAGGCAGTTCTATCATGTAGGAAAATGGTTTCCCTGCGACAAAACAGTTTaGGTAGGTCTTGAGATGATG +
Preference number: 4 (lower is better)
Translates to: ATNRNLVRQFYHVGKWFPCDKTV*VGLEMM
Trigger: CATCATCTCAAGACCTACCCAAACTGTTTTGTCGCA...GGGAAACCATTTTCCTACATGATAGAACTGCCTTACTAGATTTCTATTTGTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS GCA 90 bp CCAGCACTGCCAGTGCTGCCGCCCTCCTCCATGGTTTTAGGGCCGTaGGGCTACCACTGGCTCCGCTGTCCGCCGAGGGTTTGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: PALPVLPPSSMVLGP*GYHWLRCPPRVWVL
Trigger: GAGCACCCAAACCCTCGGCGGACAGCGGAGCCAGTGGTAGCCGCACGGCCCTAAAACCATGGAGGAGGGCGGCAGCACTGGCAGTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS GCA 90 bp GGCCGTGCGGCTACCACTGGCTCCGCTGTCCGCCGAGGGTTTGGGTaGTCGGATCAGTCTGCCCTCACAGACGCTTCCCGCGCCATCTTT +
Preference number: 5 (lower is better)
Translates to: GRAATTGSAVRRGFG*SDQSALTDASRAIF
Trigger: AAAGATGGCGCGGGAAGCGTCTGTGAGGGCAGACTGATCCGAGCACCCAAACCCTCGGCGGACAGCGGAGCCAGTGGTAGCCGCACGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS CCA 90 bp TTAGGGCCGTGCGGCTACCACTGGCTCCGCTGTCCGCCGAGGGTTTaGGTGCTCGGATCAGTCTGCCCTCACAGACGCTTCCCGCGCCAT +
Preference number: 5 (lower is better)
Translates to: LGPCGYHWLRCPPRV*VLGSVCPHRRFPRH
Trigger: ATGGCGCGGGAAGCGTCTGTGAGGGCAGACTGATCCGAGCACCCAAACCCTCGGCGGACAGCGGAGCCAGTGGTAGCCGCACGGCCCTAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS CCA 90 bp GTGCTGCCGCCCTCCTCCATGGTTTTAGGGCCGTGCGGCTACCACTaGCTCCGCTGTCCGCCGAGGGTTTGGGTGCTCGGATCAGTCTGC +
Preference number: 5 (lower is better)
Translates to: VLPPSSMVLGPCGYH*LRCPPRVWVLGSVC
Trigger: GCAGACTGATCCGAGCACCCAAACCCTCGGCGGACAGCGGAGCCAGTGGTAGCCGCACGGCCCTAAAACCATGGAGGAGGGCGGCAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS GCA 90 bp CACTGGCTCCGCTGTCCGCCGAGGGTTTGGGTGCTCGGATCAGTCTaGCCTCACAGACGCTTCCCGCGCCATCTTTGTTCGGGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: HWLRCPPRVWVLGSV*PHRRFPRHLCSGQL
Trigger: GAGCTGCCCCGAACAAAGATGGCGCGGGAAGCGTCTGTGAGGGCAGACTGATCCGAGCACCCAAACCCTCGGCGGACAGCGGAGCCAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS GCA 90 bp ATGCTGGATGATGCCATGCTCCATAAGCCGGTGGCAAAGCTGCTCTaGCTCTTTCCTCGTGGTGGCCTCACCTTCCTGAACCAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: MLDDAMLHKPVAKLL*LFPRGGLTFLNQPV
Trigger: GACTGGCTGGTTCAGGAAGGTGAGGCCACCACGAGGAAAGAGGCAGAGCAGCTTTGCCACCGGCTTATGGAGCATGGCATCATCCAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS CCA 90 bp TGCTTGTTGGACACATGCTGGATGATGCCATGCTCCATAAGCCGGTaGCAAAGCTGCTCTGCCTCTTTCCTCGTGGTGGCCTCACCTTCC +
Preference number: 5 (lower is better)
Translates to: CLLDTCWMMPCSISR*QSCSASFLVVASPS
Trigger: GGAAGGTGAGGCCACCACGAGGAAAGAGGCAGAGCAGCTTTGCCACCGGCTTATGGAGCATGGCATCATCCAGCATGTGTCCAACAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS TCA 90 bp TTCCGATTGTCATGGCTCTGCTTCCTCAGGCAGAAGGGACTGTCATaGGTTTCCTGGGAGGAGGGGGACTTTTCATTGAGCAGCTCCATC +
Preference number: 5 (lower is better)
Translates to: FRLSWLCFLRQKGLS*VSWEEGDFSLSSSI
Trigger: GATGGAGCTGCTCAATGAAAAGTCCCCCTCCTCCCAGGAAACTCATGACAGTCCCTTCTGCCTGAGGAAGCAGAGCCATGACAATCGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286234.6
ENST00000518057.1
ENST00000523492.5
CDS-3UTR CAA 90 bp TTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCCTGTCCGCCGAGGGTTaGGGTGCTCGGATCAGTCTG +
Preference number: 5 (lower is better)
Translates to: LHGNLVFALLCVILASLTLSAEG*GARISL
Trigger: CAGACTGATCCGAGCACCCAAACCCTCGGCGGACAG...GGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CAA 90 bp GATACCCGGTTCTTCCACATTCAGTGTATAAAACTCAACTTTAGACATGTATGTGCGCTCCAGCTCCCTTaGCTGCGCCCCGCCACTCCC +
Preference number: 5 (lower is better)
Translates to: DTRFFHIQCIKLNFRHVCALQLP*LRPATP
Trigger: GGGAGTGGCGGGGCGCAGCAAAGGGAGCTGGAGCGC...ACATACATGTCTAAAGTTGAGTTTTATACACTGAATGTGGAAGAACCGGGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CAA 90 bp GTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATCTTCCCGCGCCATCTTaGTTCGGGGCAGCTCCGCTG +
Preference number: 5 (lower is better)
Translates to: VQNHPFAWQSCLCIALCHLPAPS*FGAAPL
Trigger: CAGCGGAGCTGCCCCGAACAAAGATGGCGCGGGAAG...ATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CAA 90 bp ACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTCTTCCCGCGCCATCTTaGTTCGGGGCAGCTCCGCTG +
Preference number: 5 (lower is better)
Translates to: TRMSKTIHLHGNLVFALLLPAPS*FGAAPL
Trigger: CAGCGGAGCTGCCCCGAACAAAGATGGCGCGGGAAG...AAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CAA 90 bp ACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTCTGTCCGCCGAGGGTTaGGGTGCTCGGATCAGTCTG +
Preference number: 5 (lower is better)
Translates to: TIHLHGNLVFALLCVILALSAEG*GARISL
Trigger: CAGACTGATCCGAGCACCCAAACCCTCGGCGGACAG...AGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CAA 90 bp TCAACTTTAGACATGTATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCATTCTCTTCAGCACGGACTaGGGGTTGCAGAGCACAGGG +
Preference number: 5 (lower is better)
Translates to: STLDMYVRRRLVCPKPSILFSTD*GLQSTG
Trigger: CCCTGTGCTCTGCAACCCCAAGTCCGTGCTGAAGAG...AATGGATGGTTTTGGACATACGAGTCTTCTCCGCACATACATGTCTAAAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CAA 90 bp GGGGACTTTAGCATGTCGCTGTTTGGGCTAGAGAAGCATTTCAACACCTTTCTGCTGTCAGAAGCCTCTTaGTGTTCAATCAGCCAGTCA +
Preference number: 5 (lower is better)
Translates to: GDFSMSLFGLEKHFNTFLLSEAS*CSISQS
Trigger: TGACTGGCTGATTGAACACAAAGAGGCTTCTGACAG...CAGAAAGGTGTTGAAATGCTTCTCTAGCCCAAACAGCGACATGCTAAAGTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS-3UTR CAA 90 bp TTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCACAAATGGGTGCTTGTaGGACACATGCTGGATGATG +
Preference number: 5 (lower is better)
Translates to: LHGNLVFALLCVILASLTTNGCL*DTCWMM
Trigger: CATCATCCAGCATGTGTCCAACAAGCACCCATTTGT...GGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CAA 90 bp TTTAGAACCCCCTTGAAAATGCTAGTGAACAGGTCTTATTCCTTTAAATGTTGCCTCTTCAGCACGGACTaGGGGTTGCAGAGCACAGGG +
Preference number: 5 (lower is better)
Translates to: FRTPLKMLVNRSYSFKCCLFSTD*GLQSTG
Trigger: CCCTGTGCTCTGCAACCCCAAGTCCGTGCTGAAGAG...GCAACATTTAAAGGAATAAGACCTGTTCACTAGCATTTTCAAGGGGGTTCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS-3UTR CAA 90 bp CTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCATTCTACATGCAGGACATaGAGCCCGTTGACAGAGACG +
Preference number: 5 (lower is better)
Translates to: LNFRHVCAEKTRMSKTIHSTCRT*SPLTET
Trigger: CGTCTCTGTCAACGGGCTCAATGTCCTGCATGTAGA...ATGGATGGTTTTGGACATACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CAA 90 bp ACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCACAAATGGGTGCTaGTTGGACACATGCTGGATG +
Preference number: 5 (lower is better)
Translates to: TIHLHGNLVFALLCVILASTNGC*LDTCWM
Trigger: CATCCAGCATGTGTCCAACAAGCACCCATTTGTGGA...AGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CAA 90 bp ACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTCTGGTAGATTTCCGATaGTCATGGCTCTGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: TIHLHGNLVFALLCVILALVDFR*SWLCFL
Trigger: GAGGAAGCAGAGCCATGACAATCGGAAATCTACCAG...AGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CAA 90 bp CTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTATGTCCAAAACCATCCATACGATCTTGATCTCCTaGCTGGGGCTCACTGACATA +
Preference number: 5 (lower is better)
Translates to: LNFRHVCAEKTRMSKTIHTILIS*LGLTDI
Trigger: TATGTCAGTGAGCCCCAGCAAGGAGATCAAGATCGT...ATGGATGGTTTTGGACATACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CAA 90 bp TTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCTGCTTTAGAACCCCCTaGAAAATGCTAGTGAACAGG +
Preference number: 5 (lower is better)
Translates to: LHGNLVFALLCVILASLTCFRTP*KMLVNR
Trigger: CCTGTTCACTAGCATTTTCAAGGGGGTTCTAAAGCA...GGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS-3UTR CAA 90 bp CCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTCCACAAATGGGTGCTaGTTGGACACATGCTGGATG +
Preference number: 5 (lower is better)
Translates to: PKPSICMAILSLHCFVSFSTNGC*LDTCWM
Trigger: CATCCAGCATGTGTCCAACAAGCACCCATTTGTGGA...GAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CAA 90 bp GAAGACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTACGATCTTGATCTCCTaGCTGGGGCTCACTGACATA +
Preference number: 5 (lower is better)
Translates to: EDSYVQNHPFAWQSCLCITILIS*LGLTDI
Trigger: TATGTCAGTGAGCCCCAGCAAGGAGATCAAGATCGT...AATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CAA 90 bp CACATTCAGTGTATAAAACTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTTCTACATGCAGGACATaGAGCCCGTTGACAGAGACG +
Preference number: 5 (lower is better)
Translates to: HIQCIKLNFRHVCAEKTRSTCRT*SPLTET
Trigger: CGTCTCTGTCAACGGGCTCAATGTCCTGCATGTAGA...ACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAGTTTTATACACTGAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CAA 90 bp TATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTGAGGGGGACTTTTCATaGAGCAGCTCCATCAGTCTT +
Preference number: 5 (lower is better)
Translates to: YVQNHPFAWQSCLCIALCEGDFS*SSSISL
Trigger: AAGACTGATGGAGCTGCTCAATGAAAAGTCCCCCTC...ACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CAA 90 bp CACATTCAGTGTATAAAACTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTCTGGTAGATTTCCGATaGTCATGGCTCTGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: HIQCIKLNFRHVCAEKTRLVDFR*SWLCFL
Trigger: GAGGAAGCAGAGCCATGACAATCGGAAATCTACCAG...ACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAGTTTTATACACTGAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CAA 90 bp TTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTCATTCTGGCTTCCCTCACCATTTGCATGGCAATCTaGTCTTTGCATTGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: LHGNLVFALLCVILASLTICMAI*SLHCFV
Trigger: CACAAAGCAATGCAAAGACAAGATTGCCATGCAAAT...GGTGAGGGAAGCCAGAATGACACAAAGCAATGCAAAGACAAGATTGCCATGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CAA 90 bp CACATTCAGTGTATAAAACTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTACAAATGGGTGCTTGTaGGACACATGCTGGATGATG +
Preference number: 5 (lower is better)
Translates to: HIQCIKLNFRHVCAEKTRTNGCL*DTCWMM
Trigger: CATCATCCAGCATGTGTCCAACAAGCACCCATTTGT...ACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAGTTTTATACACTGAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CAA 90 bp GATACCCGGTTCTTCCACATTCAGTGTATAAAACTCAACTTTAGACATGTATGTGAGGGGGACTTTTCATaGAGCAGCTCCATCAGTCTT +
Preference number: 5 (lower is better)
Translates to: DTRFFHIQCIKLNFRHVCEGDFS*SSSISL
Trigger: AAGACTGATGGAGCTGCTCAATGAAAAGTCCCCCTC...ACATACATGTCTAAAGTTGAGTTTTATACACTGAATGTGGAAGAACCGGGTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CAA 90 bp GAGAAGACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCAATGGCTTTTAAGCACTaGAATGCTTTAGAACCCCCT +
Preference number: 5 (lower is better)
Translates to: EKTRMSKTIHLHGNLVFAMAFKH*NALEPP
Trigger: AGGGGGTTCTAAAGCATTCAAGTGCTTAAAAGCCAT...TGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTCTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS-3UTR CAA 90 bp GAGAAGACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATCCAAAACCATCCATTaGCATGGCAATCTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: EKTRMSKTIHLHGNLVFASKTIH*HGNLVF
Trigger: AAAGACAAGATTGCCATGCAAATGGATGGTTTTGGA...TGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGTCTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CAA 90 bp ACTCGTATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTAGTCAATCAGTTCTTTaGCGACAAAACAGTTTGGGT +
Preference number: 5 (lower is better)
Translates to: TRMSKTIHLHGNLVFALLSQSVL*RQNSLG
Trigger: ACCCAAACTGTTTTGTCGCAAAAGAACTGATTGACT...AAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATACGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS-3UTR CAA 90 bp CACATTCAGTGTATAAAACTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTATGGCAATCTTGTCTTaGCATTGCTTTGTGTCATTC +
Preference number: 5 (lower is better)
Translates to: HIQCIKLNFRHVCAEKTRMAILS*HCFVSF
Trigger: GAATGACACAAAGCAATGCAAAGACAAGATTGCCAT...ACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAGTTTTATACACTGAATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CAA 90 bp TATGTCCAAAACCATCCATTTGCATGGCAATCTTGTCTTTGCATTGCTTTGTGTTTAACAACTACTCTATaGACTCTGAAGAAGGGGACT +
Preference number: 5 (lower is better)
Translates to: YVQNHPFAWQSCLCIALCLTTTL*TLKKGT
Trigger: AGTCCCCTTCTTCAGAGTCAATAGAGTAGTTGTTAA...ACACAAAGCAATGCAAAGACAAGATTGCCATGCAAATGGATGGTTTTGGACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS-3UTR CAA 90 bp GATACCCGGTTCTTCCACATTCAGTGTATAAAACTCAACTTTAGACATGTATGTATGGCAATCTTGTCTTaGCATTGCTTTGTGTCATTC +
Preference number: 5 (lower is better)
Translates to: DTRFFHIQCIKLNFRHVCMAILS*HCFVSF
Trigger: GAATGACACAAAGCAATGCAAAGACAAGATTGCCAT...ACATACATGTCTAAAGTTGAGTTTTATACACTGAATGTGGAAGAACCGGGTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS-3UTR CAA 90 bp CACATTCAGTGTATAAAACTCAACTTTAGACATGTATGTGCGGAGAAGACTCGTCTTCAAAGTGAAATCTaGCCAGAAGGGTTGATTTTT +
Preference number: 5 (lower is better)
Translates to: HIQCIKLNFRHVCAEKTRLQSEI*PEGLIF
Trigger: AAAAATCAACCCTTCTGGCAAGATTTCACTTTGAAG...ACGAGTCTTCTCCGCACATACATGTCTAAAGTTGAGTTTTATACACTGAATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS GCA 72 bp CCAGTGCTGCCGCCCTCCTCCATGGTTTTAGGGCCGTaGGGCTACCACTGGCTCCGCTGTCCGCCGAGGGTT +
Preference number: 6 (lower is better)
Translates to: PVLPPSSMVLGP*GYHWLRCPPRV
Trigger: AACCCTCGGCGGACAGCGGAGCCAGTGGTAGCCGCACGGCCCTAAAACCATGGAGGAGGGCGGCAGCACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS CAA 90 bp TTTAGGGCCGTGCGGCTACCACTGGCTCCGCTGTCCGCCGAGGGTTaGGGTGCTCGGATCAGTCTGCCCTCACAGACGCTTCCCGCGCCA +
Preference number: 6 (lower is better)
Translates to: FRAVRLPLAPLSAEG*GARISLPSQTLPAP
Trigger: TGGCGCGGGAAGCGTCTGTGAGGGCAGACTGATCCGAGCACCCAAACCCTCGGCGGACAGCGGAGCCAGTGGTAGCCGCACGGCCCTAAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS GCA 72 bp GCTACCACTGGCTCCGCTGTCCGCCGAGGGTTTGGGTaGTCGGATCAGTCTGCCCTCACAGACGCTTCCCGC +
Preference number: 6 (lower is better)
Translates to: ATTGSAVRRGFG*SDQSALTDASR
Trigger: GCGGGAAGCGTCTGTGAGGGCAGACTGATCCGAGCACCCAAACCCTCGGCGGACAGCGGAGCCAGTGGTAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS GCA 72 bp GTGACCAAGACCTCAGCCATGCGCTCCAGCTCCCTTTaGTGCGCCCCGCCACTCCCGCTGGTGCTGCTGTCA +
Preference number: 6 (lower is better)
Translates to: VTKTSAMRSSSL*CAPPLPLVLLS
Trigger: TGACAGCAGCACCAGCGGGAGTGGCGGGGCGCAGCAAAGGGAGCTGGAGCGCATGGCTGAGGTCTTGGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS CCA 72 bp CCCTCCTCCATGGTTTTAGGGCCGTGCGGCTACCACTaGCTCCGCTGTCCGCCGAGGGTTTGGGTGCTCGGA +
Preference number: 6 (lower is better)
Translates to: PSSMVLGPCGYH*LRCPPRVWVLG
Trigger: TCCGAGCACCCAAACCCTCGGCGGACAGCGGAGCCAGTGGTAGCCGCACGGCCCTAAAACCATGGAGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS CCA 72 bp TGCGGCTACCACTGGCTCCGCTGTCCGCCGAGGGTTTaGGTGCTCGGATCAGTCTGCCCTCACAGACGCTTC +
Preference number: 6 (lower is better)
Translates to: CGYHWLRCPPRV*VLGSVCPHRRF
Trigger: GAAGCGTCTGTGAGGGCAGACTGATCCGAGCACCCAAACCCTCGGCGGACAGCGGAGCCAGTGGTAGCCGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS CAA 72 bp GTGCGGCTACCACTGGCTCCGCTGTCCGCCGAGGGTTaGGGTGCTCGGATCAGTCTGCCCTCACAGACGCTT +
Preference number: 6 (lower is better)
Translates to: VRLPLAPLSAEG*GARISLPSQTL
Trigger: AAGCGTCTGTGAGGGCAGACTGATCCGAGCACCCAAACCCTCGGCGGACAGCGGAGCCAGTGGTAGCCGCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS GCA 72 bp CGCTGTCCGCCGAGGGTTTGGGTGCTCGGATCAGTCTaGCCTCACAGACGCTTCCCGCGCCATCTTTGTTCG +
Preference number: 6 (lower is better)
Translates to: RCPPRVWVLGSV*PHRRFPRHLCS
Trigger: CGAACAAAGATGGCGCGGGAAGCGTCTGTGAGGGCAGACTGATCCGAGCACCCAAACCCTCGGCGGACAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS CCA 72 bp GCCGGTGGCAAAGCTGCTCTGCCTCTTTCCTCGTGGTaGCCTCACCTTCCTGAACCAGCCAGTCCAGGAATT +
Preference number: 6 (lower is better)
Translates to: AGGKAALPLSSW*PHLPEPASPGI
Trigger: AATTCCTGGACTGGCTGGTTCAGGAAGGTGAGGCCACCACGAGGAAAGAGGCAGAGCAGCTTTGCCACCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS TCA 72 bp TGTTTTCAGGGCTCATCAGCCGTAGCTGTTCCCCGGTaGCCAAGACCTCAGCCATGCGCTCCAGCTCCCTTT +
Preference number: 6 (lower is better)
Translates to: CFQGSSAVAVPR*PRPQPCAPAPF
Trigger: AAAGGGAGCTGGAGCGCATGGCTGAGGTCTTGGTCACCGGGGAACAGCTACGGCTGATGAGCCCTGAAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523492.5
CDS CCA 72 bp GACACATGCTGGATGATGCCATGCTCCATAAGCCGGTaGCAAAGCTGCTCTGCCTCTTTCCTCGTGGTGGCC +
Preference number: 6 (lower is better)
Translates to: DTCWMMPCSISR*QSCSASFLVVA
Trigger: GGCCACCACGAGGAAAGAGGCAGAGCAGCTTTGCCACCGGCTTATGGAGCATGGCATCATCCAGCATGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS GCA 72 bp GCCAACCGCGTCACCAACAATCGTGAATGTCTTCCTTaGATACGGAGCCCCGGGAGTAAGGAGTTCCTCAGA +
Preference number: 6 (lower is better)
Translates to: ANRVTNNRECLP*IRSPGSKEFLR
Trigger: TCTGAGGAACTCCTTACTCCCGGGGCTCCGTATGCAAGGAAGACATTCACGATTGTTGGTGACGCGGTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286234.6
ENST00000518057.1
ENST00000523492.5
CDS TCA 72 bp TCATGGCTCTGCTTCCTCAGGCAGAAGGGACTGTCATaGGTTTCCTGGGAGGAGGGGGACTTTTCATTGAGC +
Preference number: 6 (lower is better)
Translates to: SWLCFLRQKGLS*VSWEEGDFSLS
Trigger: GCTCAATGAAAAGTCCCCCTCCTCCCAGGAAACTCATGACAGTCCCTTCTGCCTGAGGAAGCAGAGCCATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286234.6
ENST00000518057.1
ENST00000523492.5
CDS GCA 72 bp AATGGGTGCTTGTTGGACACATGCTGGATGATGCCATaGTCCATAAGCCGGTGGCAAAGCTGCTCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: NGCLLDTCWMMP*SISRWQSCSAS
Trigger: AGAGGCAGAGCAGCTTTGCCACCGGCTTATGGAGCATGGCATCATCCAGCATGTGTCCAACAAGCACCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS CAA 72 bp CTGGGGCTCACTGACATAAAGCTGGTAGATTTCCGATaGTCATGGCTCTGCTTCCTCAGGCAGAAGGGACTG +
Preference number: 6 (lower is better)
Translates to: LGLTDIKLVDFR*SWLCFLRQKGL
Trigger: CAGTCCCTTCTGCCTGAGGAAGCAGAGCCATGACAATCGGAAATCTACCAGCTTTATGTCAGTGAGCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286234.6
ENST00000518057.1
ENST00000523492.5
CDS CAA 90 bp CTGCCACAGCTGCTCATGCTGCTTCTCCTCACTGCAGACACGATCTaGATCTCCTTGCTGGGGCTCACTGACATAAAGCTGGTAGATTTC +
Preference number: 6 (lower is better)
Translates to: LPQLLMLLLLTADTI*ISLLGLTDIKLVDF
Trigger: GAAATCTACCAGCTTTATGTCAGTGAGCCCCAGCAAGGAGATCAAGATCGTGTCTGCAGTGAGGAGAAGCAGCATGAGCAGCTGTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286234.6
ENST00000518057.1
ENST00000523492.5
CDS TCA 72 bp GCTCCATCAGTCTTCGCCTCCGCCGGAAGTTCATTCTaGACTGGTAGAGAAGATTGCTGTCCACAAATGGGT +
Preference number: 6 (lower is better)
Translates to: APSVFASAGSSF*TGREDCCPQMG
Trigger: ACCCATTTGTGGACAGCAATCTTCTCTACCAGTTCAGAATGAACTTCCGGCGGAGGCGAAGACTGATGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286234.6
ENST00000518057.1
ENST00000523492.5
CDS CAA 72 bp CTGCTTCTCCTCACTGCAGACACGATCTTGATCTCCTaGCTGGGGCTCACTGACATAAAGCTGGTAGATTTC +
Preference number: 6 (lower is better)
Translates to: LLLLTADTILIS*LGLTDIKLVDF
Trigger: GAAATCTACCAGCTTTATGTCAGTGAGCCCCAGCAAGGAGATCAAGATCGTGTCTGCAGTGAGGAGAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286234.6
ENST00000518057.1
ENST00000523492.5
CDS CCA 72 bp CATTCTGAACTGGTAGAGAAGATTGCTGTCCACAAATaGGTGCTTGTTGGACACATGCTGGATGATGCCATG +
Preference number: 6 (lower is better)
Translates to: HSELVEKIAVHK*VLVGHMLDDAM
Trigger: CATGGCATCATCCAGCATGTGTCCAACAAGCACCCATTTGTGGACAGCAATCTTCTCTACCAGTTCAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286234.6
ENST00000523492.5
CDS CCA 72 bp CTGTCCTCTCATAAAGGCCTTCACTTCATTATCCAATaGGAAGGTGCCGTCATCCTTTCTAAAGCGGTAGAA +
Preference number: 6 (lower is better)
Translates to: LSSHKGLHFIIQ*EGAVILSKAVE
Trigger: TTCTACCGCTTTAGAAAGGATGACGGCACCTTCCCATTGGATAATGAAGTGAAGGCCTTTATGAGAGGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS CCA 72 bp CATTCTGAACTGGTAGAGAAGATTGCTGTCCACAAATaGGTGCTTGTTGGACACATGAGCTCTAACATACAC +
Preference number: 6 (lower is better)
Translates to: HSELVEKIAVHK*VLVGHMSSNIH
Trigger: GTGTATGTTAGAGCTCATGTGTCCAACAAGCACCCATTTGTGGACAGCAATCTTCTCTACCAGTTCAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518057.1
CDS CAA 72 bp ATGAGTTTAATTGCCGTCTCTCTGTCAGAAGCCTCTTaGTGTTCAATCAGCCAGTCAATCAGTTCTTTTGCG +
Preference number: 6 (lower is better)
Translates to: MSLIAVSLSEAS*CSISQSISSFA
Trigger: CGCAAAAGAACTGATTGACTGGCTGATTGAACACAAAGAGGCTTCTGACAGAGAGACGGCAATTAAACTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS CAA 90 bp AATTTCTGCATGAGTTTAATTGCCGTCTCTCTGTCAGAAGCCTCTTaGTGTTCAATCAGCCAGTCAATCAGTTCTTTTGCGACAAAACAG +
Preference number: 6 (lower is better)
Translates to: NFCMSLIAVSLSEAS*CSISQSISSFATKQ
Trigger: CTGTTTTGTCGCAAAAGAACTGATTGACTGGCTGATTGAACACAAAGAGGCTTCTGACAGAGAGACGGCAATTAAACTCATGCAGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286234.6
CDS CCA 72 bp CAGCCAGTCAATCAGTTCTTTTGCGACAAAACAGTTTaGGTAGGTCTTGAGATGATGACGTCTATCTTTAAT +
Preference number: 6 (lower is better)
Translates to: QPVNQFFCDKTV*VGLEMMTSIFN
Trigger: ATTAAAGATAGACGTCATCATCTCAAGACCTACCCAAACTGTTTTGTCGCAAAAGAACTGATTGACTGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286234.6