Pregenerated sensors for DEPDC7 (Homo sapiens)
Ensembl gene IDs: ENSG00000121690Ensembl transcript IDs: ENST00000241051.8, ENST00000311388.7, ENST00000427755.2, ENST00000532078.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCGGGGCTGTGGAGAGCCGAGAGGTTCAGCGCAGCAGCCTTCTCCTaGACGGTGGCCATGGCCCTTGCTCCCCGGACGCCAACTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: AGLWRAERFSAAAFS*TVAMALAPRTPTPP Trigger: TGGAGGAGTTGGCGTCCGGGGAGCAAGGGCCATGGCCACCGTGCAGGAGAAGGCTGCTGCGCTGAACCTCTCGGCTCTCCACAGCCCCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000241051.8 ENST00000427755.2 ENST00000532078.1 |
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| CDS CCA 90 bp | CCGGTAGCACCGCGGAGCATATCCCGGAGCTCCCCGGCGCGTGCCTaGCACGTTAGCGGGCGCACAGACCAACGCGCGGTCAAGTTGAGA | + |
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Preference number: 5 (lower is better) Translates to: PVAPRSISRSSPARA*HVSGRTDQRAVKLR Trigger: TCTCAACTTGACCGCGCGTTGGTCTGTGCGCCCGCTAACGTGCCAGGCACGCGCCGGGGAGCTCCGGGATATGCTCCGCGGTGCTACCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311388.7 |
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| CDS CCA 90 bp | GAGCCGAGAGGTTCAGCGCAGCAGCCTTCTCCTGCACGGTGGCCATaGCCCTTGCTCCCCGGACGCCAACTCCTCCAGCAGCTTCACAGC | + |
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Preference number: 5 (lower is better) Translates to: EPRGSAQQPSPARWP*PLLPGRQLLQQLHS Trigger: GCTGTGAAGCTGCTGGAGGAGTTGGCGTCCGGGGAGCAAGGGCCATGGCCACCGTGCAGGAGAAGGCTGCTGCGCTGAACCTCTCGGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000241051.8 ENST00000427755.2 ENST00000532078.1 |
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| CDS CCA 90 bp | TGTGGAGAGCCGAGAGGTTCAGCGCAGCAGCCTTCTCCTGCACGGTaGCCATGGCCCTTGCTCCCCGGACGCCAACTCCTCCAGCAGCTT | + |
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Preference number: 5 (lower is better) Translates to: CGEPRGSAQQPSPAR*PWPLLPGRQLLQQL Trigger: AAGCTGCTGGAGGAGTTGGCGTCCGGGGAGCAAGGGCCATGGCCACCGTGCAGGAGAAGGCTGCTGCGCTGAACCTCTCGGCTCTCCACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000241051.8 ENST00000427755.2 ENST00000532078.1 |
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| CDS CCA 90 bp | AAGGGAGGAGCTCGGCCCCTGGCCATACTGTGTCGTCAAGGTTTGTaGTTGAGACAGGGGGCAAAGAACTACACAAATTCCAGATACCAC | + |
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Preference number: 5 (lower is better) Translates to: KGGARPLAILCRQGL*LRQGAKNYTNSRYH Trigger: GTGGTATCTGGAATTTGTGTAGTTCTTTGCCCCCTGTCTCAACCACAAACCTTGACGACACAGTATGGCCAGGGGCCGAGCTCCTCCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311388.7 |
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| CDS TCA 90 bp | GAGGAGCTCGGCCCCTGGCCATACTGTGTCGTCAAGGTTTGTGGTTaGGACAGGGGGCAAAGAACTACACAAATTCCAGATACCACACTT | + |
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Preference number: 5 (lower is better) Translates to: EELGPWPYCVVKVCG*DRGQRTTQIPDTTL Trigger: AAGTGTGGTATCTGGAATTTGTGTAGTTCTTTGCCCCCTGTCTCAACCACAAACCTTGACGACACAGTATGGCCAGGGGCCGAGCTCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311388.7 |
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| CDS CCA 90 bp | CGGTCTGGTTGCTCAGGAAAGCTTCTGCTTATTTCCACCACCATTTaGTCTGGAAGGTATTCTAAACAGTCAATTGCTGCCGAGAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: RSGCSGKLLLISTTI*SGRYSKQSIAAESH Trigger: GTGGCTCTCGGCAGCAATTGACTGTTTAGAATACCTTCCAGACCAAATGGTGGTGGAAATAAGCAGAAGCTTTCCTGAGCAACCAGACCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000241051.8 ENST00000311388.7 |
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| CDS TCA 90 bp | ATCCTTAGCTTACCTTGTGGAGACAAGGTTGCAGAGATATTTACATaGGGGGAGTTGGCAGGCTTTAAACTCAGATTTTCCCACAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: ILSLPCGDKVAEIFT*GELAGFKLRFSHRS Trigger: GGACCTGTGGGAAAATCTGAGTTTAAAGCCTGCCAACTCCCCTCATGTAAATATCTCTGCAACCTTGTCTCCACAAGGTAAGCTAAGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000532078.1 |
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| CDS CCA 90 bp | TACCTTGTGGAGACAAGGTTGCAGAGATATTTACATGAGGGGAGTTaGCAGGCTTTAAACTCAGATTTTCCCACAGGTCCTCTAAACTGG | + |
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Preference number: 5 (lower is better) Translates to: YLVETRLQRYLHEGS*QALNSDFPTGPLNW Trigger: CCAGTTTAGAGGACCTGTGGGAAAATCTGAGTTTAAAGCCTGCCAACTCCCCTCATGTAAATATCTCTGCAACCTTGTCTCCACAAGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000532078.1 |
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| CDS GCA 90 bp | ATGGCATCAAACAGAAGTTCTTTCACTAAGTCTGTTCGGTCTGGTTaGTCAGGAAAGCTTCTGCTTATTTCCACCACCATTTGGTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: MASNRSSFTKSVRSG*SGKLLLISTTIWSG Trigger: TCCAGACCAAATGGTGGTGGAAATAAGCAGAAGCTTTCCTGAGCAACCAGACCGAACAGACTTAGTGAAAGAACTTCTGTTTGATGCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000241051.8 ENST00000311388.7 |
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| CDS TCA 90 bp | ACTTCATTAATAACTTGTGGAGACAAGGTTGCAGAGATATTTACATaGGGGGAGTTGGCAGGCTTTAAACTCAGATTTTCCCACAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: TSLITCGDKVAEIFT*GELAGFKLRFSHRS Trigger: GGACCTGTGGGAAAATCTGAGTTTAAAGCCTGCCAACTCCCCTCATGTAAATATCTCTGCAACCTTGTCTCCACAAGTTATTAATGAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000241051.8 ENST00000311388.7 |
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| CDS GCA 90 bp | CGTCAGATAAGTGATTTAACAGAGGTTCCCTACTACTGTAATATCTaGCAATGGCATCAAACAGAAGTTCTTTCACTAAGTCTGTTCGGT | + |
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Preference number: 5 (lower is better) Translates to: RQISDLTEVPYYCNI*QWHQTEVLSLSLFG Trigger: ACCGAACAGACTTAGTGAAAGAACTTCTGTTTGATGCCATTGGCAGATATTACAGTAGTAGGGAACCTCTGTTAAATCACTTATCTGACG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000241051.8 ENST00000311388.7 |
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| CDS CCA 90 bp | GCTGTAAGTTCATTATGCATTATCACCCACATCCATTTCAATCACTaGATTCCACAATTCTGTCTCCCCAGTTTCCCTTTAAATAATTCC | + |
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Preference number: 5 (lower is better) Translates to: AVSSLCIITHIHFNH*IPQFCLPSFPLNNS Trigger: GGAATTATTTAAAGGGAAACTGGGGAGACAGAATTGTGGAATCCAGTGATTGAAATGGATGTGGGTGATAATGCATAATGAACTTACAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427755.2 |
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| CDS TCA 90 bp | ACACACGAAAATGAATACACTAAAACTCTGACTTTAGGTCAGATCTaGTATAAGAGCTTCAATTATACCTCTGTGTCACCACTGCACAGT | + |
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Preference number: 5 (lower is better) Translates to: THENEYTKTLTLGQI*YKSFNYTSVSPLHS Trigger: ACTGTGCAGTGGTGACACAGAGGTATAATTGAAGCTCTTATATCAGATCTGACCTAAAGTCAGAGTTTTAGTGTATTCATTTTCGTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427755.2 |
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| CDS CCA 72 bp | CCGCGGAGCATATCCCGGAGCTCCCCGGCGCGTGCCTaGCACGTTAGCGGGCGCACAGACCAACGCGCGGTC | + |
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Preference number: 6 (lower is better) Translates to: PRSISRSSPARA*HVSGRTDQRAV Trigger: GACCGCGCGTTGGTCTGTGCGCCCGCTAACGTGCCAGGCACGCGCCGGGGAGCTCCGGGATATGCTCCGCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311388.7 |
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| CDS GCA 72 bp | TGGAGAGCCGAGAGGTTCAGCGCAGCAGCCTTCTCCTaGACGGTGGCCATGGCCCTTGCTCCCCGGACGCCA | + |
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Preference number: 6 (lower is better) Translates to: WRAERFSAAAFS*TVAMALAPRTP Trigger: TGGCGTCCGGGGAGCAAGGGCCATGGCCACCGTGCAGGAGAAGGCTGCTGCGCTGAACCTCTCGGCTCTCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000241051.8 ENST00000427755.2 ENST00000532078.1 |
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| CDS CCA 72 bp | GGTTCAGCGCAGCAGCCTTCTCCTGCACGGTGGCCATaGCCCTTGCTCCCCGGACGCCAACTCCTCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: GSAQQPSPARWP*PLLPGRQLLQQ Trigger: CTGCTGGAGGAGTTGGCGTCCGGGGAGCAAGGGCCATGGCCACCGTGCAGGAGAAGGCTGCTGCGCTGAACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000241051.8 ENST00000427755.2 ENST00000532078.1 |
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| CDS CAA 72 bp | GCGCAGCAGCCTTCTCCTGCACGGTGGCCATGGCCCTaGCTCCCCGGACGCCAACTCCTCCAGCAGCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: AQQPSPARWPWP*LPGRQLLQQLH Trigger: GTGAAGCTGCTGGAGGAGTTGGCGTCCGGGGAGCAAGGGCCATGGCCACCGTGCAGGAGAAGGCTGCTGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000241051.8 ENST00000427755.2 ENST00000532078.1 |
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| CDS CAA 90 bp | AGAGGTTCAGCGCAGCAGCCTTCTCCTGCACGGTGGCCATGGCCCTaGCTCCCCGGACGCCAACTCCTCCAGCAGCTTCACAGCTCCCTA | + |
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Preference number: 6 (lower is better) Translates to: RGSAQQPSPARWPWP*LPGRQLLQQLHSSL Trigger: TAGGGAGCTGTGAAGCTGCTGGAGGAGTTGGCGTCCGGGGAGCAAGGGCCATGGCCACCGTGCAGGAGAAGGCTGCTGCGCTGAACCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000241051.8 ENST00000427755.2 |
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| CDS CAA 90 bp | GTTGAGACAGGGGGCAAAGAACTACACAAATTCCAGATACCACACTaGTCACCGGTAGCACCGCGGAGCATATCCCGGAGCTCCCCGGCG | + |
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Preference number: 6 (lower is better) Translates to: VETGGKELHKFQIPH*SPVAPRSISRSSPA Trigger: CGCCGGGGAGCTCCGGGATATGCTCCGCGGTGCTACCGGTGACAAGTGTGGTATCTGGAATTTGTGTAGTTCTTTGCCCCCTGTCTCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311388.7 |
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| CDS TCA 72 bp | ATGCTGCTCCATACATACGTGGCTCCAAATGGCTTCTaGGCTACACTGAAACCCGGAGGCCTGTGCGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: MLLHTYVAPNGF*ATLKPGGLCAG Trigger: CCCCGCGCACAGGCCTCCGGGTTTCAGTGTAGCTCAGAAGCCATTTGGAGCCACGTATGTATGGAGCAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000241051.8 ENST00000427755.2 ENST00000532078.1 |
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| CDS CAA 72 bp | GGGGGCAAAGAACTACACAAATTCCAGATACCACACTaGTCACCGGTAGCACCGCGGAGCATATCCCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GGKELHKFQIPH*SPVAPRSISRS Trigger: GCTCCGGGATATGCTCCGCGGTGCTACCGGTGACAAGTGTGGTATCTGGAATTTGTGTAGTTCTTTGCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311388.7 |
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| CDS CAA 90 bp | GGCAAGGGAGGAGCTCGGCCCCTGGCCATACTGTGTCGTCAAGGTTaGTGGTTGAGACAGGGGGCAAAGAACTACACAAATTCCAGATAC | + |
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Preference number: 6 (lower is better) Translates to: GKGGARPLAILCRQG*WLRQGAKNYTNSRY Trigger: GTATCTGGAATTTGTGTAGTTCTTTGCCCCCTGTCTCAACCACAAACCTTGACGACACAGTATGGCCAGGGGCCGAGCTCCTCCCTTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311388.7 |
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| CDS CCA 72 bp | GCTCGGCCCCTGGCCATACTGTGTCGTCAAGGTTTGTaGTTGAGACAGGGGGCAAAGAACTACACAAATTCC | + |
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Preference number: 6 (lower is better) Translates to: ARPLAILCRQGL*LRQGAKNYTNS Trigger: GGAATTTGTGTAGTTCTTTGCCCCCTGTCTCAACCACAAACCTTGACGACACAGTATGGCCAGGGGCCGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311388.7 |
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| CDS CAA 72 bp | GGAGCTCGGCCCCTGGCCATACTGTGTCGTCAAGGTTaGTGGTTGAGACAGGGGGCAAAGAACTACACAAAT | + |
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Preference number: 6 (lower is better) Translates to: GARPLAILCRQG*WLRQGAKNYTN Trigger: ATTTGTGTAGTTCTTTGCCCCCTGTCTCAACCACAAACCTTGACGACACAGTATGGCCAGGGGCCGAGCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311388.7 |
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| CDS CAA 90 bp | GGAGGAGCTCGGCCCCTGGCCATACTGTGTCGTCAAGGTTTGTGGTaGAGACAGGGGGCAAAGAACTACACAAATTCCAGATACCACACT | + |
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Preference number: 6 (lower is better) Translates to: GGARPLAILCRQGLW*RQGAKNYTNSRYHT Trigger: AGTGTGGTATCTGGAATTTGTGTAGTTCTTTGCCCCCTGTCTCAACCACAAACCTTGACGACACAGTATGGCCAGGGGCCGAGCTCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311388.7 |
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| CDS CAA 72 bp | CGGCCCCTGGCCATACTGTGTCGTCAAGGTTTGTGGTaGAGACAGGGGGCAAAGAACTACACAAATTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: RPLAILCRQGLW*RQGAKNYTNSR Trigger: TCTGGAATTTGTGTAGTTCTTTGCCCCCTGTCTCAACCACAAACCTTGACGACACAGTATGGCCAGGGGCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311388.7 |
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| CDS CAA 72 bp | CCACCATTTGGTCTGGAAGGTATTCTAAACAGTCAATaGCTGCCGAGAGCCACTCATCTTCCTGAGAGTCAC | + |
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Preference number: 6 (lower is better) Translates to: PPFGLEGILNSQ*LPRATHLPESH Trigger: GTGACTCTCAGGAAGATGAGTGGCTCTCGGCAGCAATTGACTGTTTAGAATACCTTCCAGACCAAATGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000241051.8 ENST00000311388.7 |
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| CDS CAA 72 bp | GTTACTGCTGTTGACCATGGTGGACTGCCTCTTAGGTaGAGGAATTTTAGGTACAGCCTCTTGCTGTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: VTAVDHGGLPLR*RNFRYSLLLFQ Trigger: CTGAAACAGCAAGAGGCTGTACCTAAAATTCCTCAACCTAAGAGGCAGTCCACCATGGTCAACAGCAGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000241051.8 ENST00000311388.7 |
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| CDS TCA 72 bp | TTACTGCTGTTGACCATGGTGGACTGCCTCTTAGGTTaGGGAATTTTAGGTACAGCCTCTTGCTGTTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: LLLLTMVDCLLG*GILGTASCCFS Trigger: ACTGAAACAGCAAGAGGCTGTACCTAAAATTCCTCAACCTAAGAGGCAGTCCACCATGGTCAACAGCAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000241051.8 ENST00000311388.7 |
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| CDS CCA 72 bp | GAGACAAGGTTGCAGAGATATTTACATGAGGGGAGTTaGCAGGCTTTAAACTCAGATTTTCCCACAGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: ETRLQRYLHEGS*QALNSDFPTGP Trigger: AGGACCTGTGGGAAAATCTGAGTTTAAAGCCTGCCAACTCCCCTCATGTAAATATCTCTGCAACCTTGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000241051.8 ENST00000311388.7 ENST00000532078.1 |
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| CDS CCA 72 bp | CCTTTAAATAATTCCTTCTTCTCTCCCACCGCAATCTaGGTTTCTCTCTGCCTGCCTTCGCTATGTTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: PLNNSFFSPTAI*VSLCLPSLCSH Trigger: ATGAGAACATAGCGAAGGCAGGCAGAGAGAAACCCAGATTGCGGTGGGAGAGAAGAAGGAATTATTTAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427755.2 |
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| CDS CAA 72 bp | TTTGCTTCATCCTTAGCTTACCTTGTGGAGACAAGGTaGCAGAGATATTTACATGAGGGGAGTTGGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: FASSLAYLVETR*QRYLHEGSWQA Trigger: AGCCTGCCAACTCCCCTCATGTAAATATCTCTGCAACCTTGTCTCCACAAGGTAAGCTAAGGATGAAGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532078.1 |
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| CDS CAA 90 bp | GACTTTGGTTGGAACTGCTTCAAATACTTTGTAGTCCATAAGCGCTaGACACACTCTCACCACTTTGGCTCGAGGAATATCTACATCACC | + |
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Preference number: 6 (lower is better) Translates to: DFGWNCFKYFVVHKR*THSHHFGSRNIYIT Trigger: GGTGATGTAGATATTCCTCGAGCCAAAGTGGTGAGAGTGTGTCAAGCGCTTATGGACTACAAAGTATTTGAAGCAGTTCCAACCAAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000241051.8 ENST00000311388.7 ENST00000427755.2 ENST00000532078.1 |
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| CDS CAA 90 bp | TTATTTCCACCACCATTTGGTCTGGAAGGTATTCTAAACAGTCAATaGCTGCCGAGAGCCACTCATCTTCCTGAGAGTCACTATAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: LFPPPFGLEGILNSQ*LPRATHLPESHYKP Trigger: AGGCTTATAGTGACTCTCAGGAAGATGAGTGGCTCTCGGCAGCAATTGACTGTTTAGAATACCTTCCAGACCAAATGGTGGTGGAAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000241051.8 ENST00000311388.7 |
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| CDS CCA 72 bp | TGCTCAGGAAAGCTTCTGCTTATTTCCACCACCATTTaGTCTGGAAGGTATTCTAAACAGTCAATTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: CSGKLLLISTTI*SGRYSKQSIAA Trigger: GGCAGCAATTGACTGTTTAGAATACCTTCCAGACCAAATGGTGGTGGAAATAAGCAGAAGCTTTCCTGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000241051.8 ENST00000311388.7 |
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| CDS TCA 72 bp | TTACCTTGTGGAGACAAGGTTGCAGAGATATTTACATaGGGGGAGTTGGCAGGCTTTAAACTCAGATTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LPCGDKVAEIFT*GELAGFKLRFS Trigger: GGAAAATCTGAGTTTAAAGCCTGCCAACTCCCCTCATGTAAATATCTCTGCAACCTTGTCTCCACAAGGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000532078.1 |
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| CDS GCA 72 bp | TTGCCACACTTCATTAATAACTTGTGGAGACAAGGTTaGAGAGATATTTACATGAGGGGAGTTGGCAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: LPHFINNLWRQG*RDIYMRGVGRL Trigger: AAGCCTGCCAACTCCCCTCATGTAAATATCTCTGCAACCTTGTCTCCACAAGTTATTAATGAAGTGTGGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000241051.8 ENST00000311388.7 |
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| CDS GCA 72 bp | CAAATCTGCATGCAAAACATCTCAGATCTGAACCTTTaGCAGCTGATCGGACAAAAGTCAGTGTTCAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: QICMQNISDLNL*QLIGQKSVFKS Trigger: ACTCTTGAACACTGACTTTTGTCCGATCAGCTGGCAAAGGTTCAGATCTGAGATGTTTTGCATGCAGATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000532078.1 |
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| CDS TCA 72 bp | ATAACTTGTGGAGACAAGGTTGCAGAGATATTTACATaGGGGGAGTTGGCAGGCTTTAAACTCAGATTTTCC | + |
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Preference number: 6 (lower is better) Translates to: ITCGDKVAEIFT*GELAGFKLRFS Trigger: GGAAAATCTGAGTTTAAAGCCTGCCAACTCCCCTCATGTAAATATCTCTGCAACCTTGTCTCCACAAGTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000241051.8 ENST00000311388.7 |
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| CDS CCA 72 bp | TCATTATGCATTATCACCCACATCCATTTCAATCACTaGATTCCACAATTCTGTCTCCCCAGTTTCCCTTTA | + |
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Preference number: 6 (lower is better) Translates to: SLCIITHIHFNH*IPQFCLPSFPL Trigger: TAAAGGGAAACTGGGGAGACAGAATTGTGGAATCCAGTGATTGAAATGGATGTGGGTGATAATGCATAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427755.2 |
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| CDS CAA 90 bp | CCACTGCACAGTTTAGCTGAGGGTAACAAAGGGGAAAGGGTAAAGTaGGTTTACTTCATGACAAATAGCTGTAAGTTCATTATGCATTAT | + |
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Preference number: 6 (lower is better) Translates to: PLHSLAEGNKGERVK*VYFMTNSCKFIMHY Trigger: ATAATGCATAATGAACTTACAGCTATTTGTCATGAAGTAAACCAACTTTACCCTTTCCCCTTTGTTACCCTCAGCTAAACTGTGCAGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427755.2 |
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| CDS GCA 72 bp | AGTGATTTAACAGAGGTTCCCTACTACTGTAATATCTaGCAATGGCATCAAACAGAAGTTCTTTCACTAAGT | + |
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Preference number: 6 (lower is better) Translates to: SDLTEVPYYCNI*QWHQTEVLSLS Trigger: ACTTAGTGAAAGAACTTCTGTTTGATGCCATTGGCAGATATTACAGTAGTAGGGAACCTCTGTTAAATCACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000241051.8 ENST00000311388.7 |
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| CDS CCA 72 bp | TCAACAGCTCATCTTTGGTTGTCTTCTCTGTATTGTTaGAATAGTCACGTTGATCAATTCTCTGGCAATAAA | + |
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Preference number: 6 (lower is better) Translates to: STAHLWLSSLYC*NSHVDQFSGNK Trigger: TTTATTGCCAGAGAATTGATCAACGTGACTATTCCAACAATACAGAGAAGACAACCAAAGATGAGCTGTTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000241051.8 ENST00000311388.7 |
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| CDS CAA 72 bp | AGTTTAGCTGAGGGTAACAAAGGGGAAAGGGTAAAGTaGGTTTACTTCATGACAAATAGCTGTAAGTTCATT | + |
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Preference number: 6 (lower is better) Translates to: SLAEGNKGERVK*VYFMTNSCKFI Trigger: AATGAACTTACAGCTATTTGTCATGAAGTAAACCAACTTTACCCTTTCCCCTTTGTTACCCTCAGCTAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427755.2 |
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| CDS CAA 72 bp | TTTGGTTGTCTTCTCTGTATTGTTGGAATAGTCACGTaGATCAATTCTCTGGCAATAAATATATCCTGCATC | + |
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Preference number: 6 (lower is better) Translates to: FGCLLCIVGIVT*INSLAINISCI Trigger: GATGCAGGATATATTTATTGCCAGAGAATTGATCAACGTGACTATTCCAACAATACAGAGAAGACAACCAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000241051.8 ENST00000311388.7 |
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| CDS TCA 72 bp | AATGAATACACTAAAACTCTGACTTTAGGTCAGATCTaGTATAAGAGCTTCAATTATACCTCTGTGTCACCA | + |
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Preference number: 6 (lower is better) Translates to: NEYTKTLTLGQI*YKSFNYTSVSP Trigger: TGGTGACACAGAGGTATAATTGAAGCTCTTATATCAGATCTGACCTAAAGTCAGAGTTTTAGTGTATTCATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427755.2 |
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