Pregenerated sensors for DEPDC4 (Homo sapiens)
Ensembl gene IDs: ENSG00000166153Ensembl transcript IDs: ENST00000299185.12, ENST00000378244.6, ENST00000416321.5, ENST00000547823.1, ENST00000548313.5, ENST00000549100.5, ENST00000549249.5, ENST00000549341.1, ENST00000550587.6, ENST00000551642.1
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTTCTGTGTTAAAGCCAGAAAGACTAGGACCTTTACCAAAGCACTaGCTTTCGCCTCTGCAGTGGCGGAAGCAATACTTACCTGTAAGG | + |
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Preference number: 1 (lower is better) Translates to: LSVLKPERLGPLPKH*LSPLQWRKQYLPVR Trigger: CCTTACAGGTAAGTATTGCTTCCGCCACTGCAGAGGCGAAAGCCAGTGCTTTGGTAAAGGTCCTAGTCTTTCTGGCTTTAACACAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR CCA 90 bp | ATGGCAACTTTCCAAATAAGGAGACTTCTATCGAAGAGGGCTTGGTaGCATGTTTCCAATATTTTCCCGGTATCTCTTCAGGTACCCTCT | + |
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Preference number: 1 (lower is better) Translates to: MATFQIRRLLSKRAW*HVSNIFPVSLQVPS Trigger: AGAGGGTACCTGAAGAGATACCGGGAAAATATTGGAAACATGCCACCAAGCCCTCTTCGATAGAAGTCTCCTTATTTGGAAAGTTGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR CCA 90 bp | AAAATGGCAACTTTCCAAATAAGGAGACTTCTATCGAAGAGGGCTTaGTGGCATGTTTCCAATATTTTCCCGGTATCTCTTCAGGTACCC | + |
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Preference number: 1 (lower is better) Translates to: KMATFQIRRLLSKRA*WHVSNIFPVSLQVP Trigger: GGGTACCTGAAGAGATACCGGGAAAATATTGGAAACATGCCACCAAGCCCTCTTCGATAGAAGTCTCCTTATTTGGAAAGTTGCCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR TCA 90 bp | ATGCTGGGGTTACTATTAATCTCAAGAGCCAACTGGTGTAGATACTaGATTGTCCTTCCCTTCTGCTTTTCAAACTCCTTGTATGTCAAG | + |
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Preference number: 1 (lower is better) Translates to: MLGLLLISRANWCRY*IVLPFCFSNSLYVK Trigger: CTTGACATACAAGGAGTTTGAAAAGCAGAAGGGAAGGACAATTCAGTATCTACACCAGTTGGCTCTTGAGATTAATAGTAACCCCAGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR TCA 90 bp | TCGCCTCTGCAGTGGCGGAAGCAATACTTACCTGTAAGGATTTCTTaGGGATTATTAGAGAAAGAAAGGATCCAGTATAGAACTTGTTAC | + |
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Preference number: 1 (lower is better) Translates to: SPLQWRKQYLPVRIS*GLLEKERIQYRTCY Trigger: GTAACAAGTTCTATACTGGATCCTTTCTTTCTCTAATAATCCTCAAGAAATCCTTACAGGTAAGTATTGCTTCCGCCACTGCAGAGGCGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR TCA 90 bp | TGTTCTTTCCAAACATCTTCTTTTGAAAGCCGGAGAAAAGGTTTCTaGACTGTGATATTTGGACATAAAGCTGGATTCCCATTTATTGTA | + |
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Preference number: 1 (lower is better) Translates to: CSFQTSSFESRRKGF*TVIFGHKAGFPFIV Trigger: TACAATAAATGGGAATCCAGCTTTATGTCCAAATATCACAGTTCAGAAACCTTTTCTCCGGCTTTCAAAAGAAGATGTTTGGAAAGAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299185.12 ENST00000549341.1 |
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| 3UTR TCA 90 bp | CATCAGTTAATAGGCAATCTCTCTCTTGAGCATAGTATTTTGCTATaGCATCAAAGAGTATCTTCTTCTGACTGTTCAATCTTGTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: HQLIGNLSLEHSILL*HQRVSSSDCSILSL Trigger: AAGAGACAAGATTGAACAGTCAGAAGAAGATACTCTTTGATGTCATAGCAAAATACTATGCTCAAGAGAGAGATTGCCTATTAACTGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299185.12 |
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| 3UTR-3UTR TCA 90 bp | CCTTCCTCTGTAATTCTACCACTTTGGGTGGCCAAGGTAGGGAGATGGCTTGAGAACTGGTGTAGATACTaGATTGTCCTTCCCTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: PSSVILPLWVAKVGRWLENWCRY*IVLPFC Trigger: GCAGAAGGGAAGGACAATTCAGTATCTACACCAGTT...CTCAAGCCATCTCCCTACCTTGGCCACCCAAAGTGGTAGAATTACAGAGGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR-3UTR CCA 90 bp | ACTTCTATCGAAGAGGGCTTGGTGGCATGTTTCCAATATTTTCCCGGTATCTCTGCAACTTGTAGGCATTaGGCTCTGATGCCATTGCCA | + |
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Preference number: 2 (lower is better) Translates to: TSIEEGLVACFQYFPGISATCRH*ALMPLP Trigger: TGGCAATGGCATCAGAGCCCAATGCCTACAAGTTGC...AGAGATACCGGGAAAATATTGGAAACATGCCACCAAGCCCTCTTCGATAGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR-3UTR CCA 90 bp | ATCCTCCTGCCTCAGCCTTCCTCTGTAATTCTACCACTTTGGGTGGCCAAGGTATTGTATGTCAAGGGTTaGCAAAACGTAAAGCCATGT | + |
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Preference number: 2 (lower is better) Translates to: ILLPQPSSVILPLWVAKVLYVKG*QNVKPC Trigger: ACATGGCTTTACGTTTTGCCAACCCTTGACATACAA...TACCTTGGCCACCCAAAGTGGTAGAATTACAGAGGAAGGCTGAGGCAGGAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR-3UTR TCA 90 bp | GCAGTGGCGGAAGCAATACTTACCTGTAAGGATTTCTTGAGGATTATTAGAGAAGGTAGGGAGATGGCTTaGGTCCAGGAGTTTGAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: AVAEAILTCKDFLRIIREGREMA*VQEFEV Trigger: AACCTCAAACTCCTGGACTCAAGCCATCTCCCTACC...TTCTCTAATAATCCTCAAGAAATCCTTACAGGTAAGTATTGCTTCCGCCACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR-3UTR GCA 90 bp | GCAGTGGCGGAAGCAATACTTACCTGTAAGGATTTCTTGAGGATTATTAGAGAACCACCCAGGCTGGAATaGAGTAGTGGGATCACAGTT | + |
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Preference number: 2 (lower is better) Translates to: AVAEAILTCKDFLRIIREPPRLE*SSGITV Trigger: AACTGTGATCCCACTACTGCATTCCAGCCTGGGTGG...TTCTCTAATAATCCTCAAGAAATCCTTACAGGTAAGTATTGCTTCCGCCACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR-3UTR CCA 90 bp | GCAGTGGCGGAAGCAATACTTACCTGTAAGGATTTCTTGAGGATTATTAGAGAATCTGTCCACCCAGGCTaGAATGCAGTAGTGGGATCA | + |
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Preference number: 2 (lower is better) Translates to: AVAEAILTCKDFLRIIRESVHPG*NAVVGS Trigger: TGATCCCACTACTGCATTCCAGCCTGGGTGGACAGA...TTCTCTAATAATCCTCAAGAAATCCTTACAGGTAAGTATTGCTTCCGCCACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR-3UTR TCA 90 bp | ATATTTTCCCGGTATCTCTTCAGGTACCCTCTCAGGTCTTCCACTGGAAGTATATTTTCAGCCATACCTTaGAGAGCTCAGAGTGGTACT | + |
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Preference number: 2 (lower is better) Translates to: IFSRYLFRYPLRSSTGSIFSAIP*RAQSGT Trigger: AGTACCACTCTGAGCTCTTCAAGGTATGGCTGAAAA...TATACTTCCAGTGGAAGACCTGAGAGGGTACCTGAAGAGATACCGGGAAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR-3UTR CCA 90 bp | ACTTCTATCGAAGAGGGCTTGGTGGCATGTTTCCAATATTTTCCCGGTATCTCTTCTCAGGTCTTCCACTaGAAGTATACTAACTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: TSIEEGLVACFQYFPGISSQVFH*KYTNFL Trigger: GAGGAAGTTAGTATACTTCCAGTGGAAGACCTGAGA...AGAGATACCGGGAAAATATTGGAAACATGCCACCAAGCCCTCTTCGATAGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR-3UTR CCA 90 bp | ACTTCTATCGAAGAGGGCTTGGTGGCATGTTTCCAATATTTTCCCGGTATCTCTCTTGCAAAACTGATTTaGCAAGAGTTTTCAGGACCA | + |
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Preference number: 2 (lower is better) Translates to: TSIEEGLVACFQYFPGISLAKLI*QEFSGP Trigger: TGGTCCTGAAAACTCTTGCCAAATCAGTTTTGCAAG...AGAGATACCGGGAAAATATTGGAAACATGCCACCAAGCCCTCTTCGATAGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR-3UTR TCA 90 bp | CTGGAGGCTCCAAAATATTGTCCAAGAATGGAAGGTGAATCAATTGAAGAAGACCGGAGAAAAGGTTTCTaGACTGTGATATTTGGACAT | + |
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Preference number: 2 (lower is better) Translates to: LEAPKYCPRMEGESIEEDRRKGF*TVIFGH Trigger: ATGTCCAAATATCACAGTTCAGAAACCTTTTCTCCG...GTCTTCTTCAATTGATTCACCTTCCATTCTTGGACAATATTTTGGAGCCTCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299185.12 ENST00000549341.1 |
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| 3UTR-3UTR TCA 90 bp | CTGGAGGCTCCAAAATATTGTCCAAGAATGGAAGGTGAATCAATTGAAGAAGACCCAAACATCTTCTTTTaGAAGCCGGAGAAAAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: LEAPKYCPRMEGESIEEDPNIFF*KPEKRF Trigger: AAACCTTTTCTCCGGCTTTCAAAAGAAGATGTTTGG...GTCTTCTTCAATTGATTCACCTTCCATTCTTGGACAATATTTTGGAGCCTCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000299185.12 ENST00000549341.1 |
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| 3UTR-3UTR CCA 90 bp | CAAATGGTATTAAGACTTTCTGTGTTAAAGCCAGAAAGACTAGGACCTTTACCACTATCGAAGAGGGCTTaGTGGCATGTTTCCAATATT | + |
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Preference number: 2 (lower is better) Translates to: QMVLRLSVLKPERLGPLPLSKRA*WHVSNI Trigger: AATATTGGAAACATGCCACCAAGCCCTCTTCGATAG...TGGTAAAGGTCCTAGTCTTTCTGGCTTTAACACAGAAAGTCTTAATACCATTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR-3UTR TCA 90 bp | TTTAACTGGAGGCTCCAAAATATTGTCCAAGAATGGAAGGTGAATCAATTGAAGCGGAGAAAAGGTTTCTaGACTGTGATATTTGGACAT | + |
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Preference number: 2 (lower is better) Translates to: FNWRLQNIVQEWKVNQLKRRKGF*TVIFGH Trigger: ATGTCCAAATATCACAGTTCAGAAACCTTTTCTCCG...CTTCAATTGATTCACCTTCCATTCTTGGACAATATTTTGGAGCCTCCAGTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299185.12 ENST00000549341.1 |
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| 3UTR-3UTR TCA 90 bp | CATTTTTCAGGTAGACATAAGCTTGGAATAAGTTCTCTGTCTAGGCAAGTGTTACCAAACATCTTCTTTTaGAAGCCGGAGAAAAGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: HFSGRHKLGISSLSRQVLPNIFF*KPEKRF Trigger: AAACCTTTTCTCCGGCTTTCAAAAGAAGATGTTTGG...TAACACTTGCCTAGACAGAGAACTTATTCCAAGCTTATGTCTACCTGAAAAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000549341.1 |
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| 3UTR CCA 72 bp | CTCCTGCCTCAGCCTTCCTCTGTAATTCTACCACTTTaGGTGGCCAAGGTAGGGAGATGGCTTGAGTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: LLPQPSSVILPL*VAKVGRWLESR Trigger: CCTGGACTCAAGCCATCTCCCTACCTTGGCCACCCAAAGTGGTAGAATTACAGAGGAAGGCTGAGGCAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR CCA 72 bp | CCGGTATCTCTTCAGGTACCCTCTCAGGTCTTCCACTaGAAGTATACTAACTTCCTCCCCAAAAATTGTAGT | + |
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Preference number: 3 (lower is better) Translates to: PVSLQVPSQVFH*KYTNFLPKNCS Trigger: ACTACAATTTTTGGGGAGGAAGTTAGTATACTTCCAGTGGAAGACCTGAGAGGGTACCTGAAGAGATACCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR-3UTR CAA 90 bp | ATATTTTCCCGGTATCTCTTCAGGTACCCTCTCAGGTCTTCCACTGGAAGTATAGCTTGCAAAACTGATTaGGCAAGAGTTTTCAGGACC | + |
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Preference number: 3 (lower is better) Translates to: IFSRYLFRYPLRSSTGSIACKTD*ARVFRT Trigger: GGTCCTGAAAACTCTTGCCAAATCAGTTTTGCAAGC...TATACTTCCAGTGGAAGACCTGAGAGGGTACCTGAAGAGATACCGGGAAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR-3UTR CAA 90 bp | TTTTCCCGGTATCTCTTCAGGTACCCTCTCAGGTCTTCCACTGGAAGTATACTATGCTTTTCAAACTCCTaGTATGTCAAGGGTTGGCAA | + |
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Preference number: 3 (lower is better) Translates to: FSRYLFRYPLRSSTGSILCFSNS*YVKGWQ Trigger: TTGCCAACCCTTGACATACAAGGAGTTTGAAAAGCA...TAGTATACTTCCAGTGGAAGACCTGAGAGGGTACCTGAAGAGATACCGGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR-3UTR CAA 90 bp | ATATTTTCCCGGTATCTCTTCAGGTACCCTCTCAGGTCTTCCACTGGAAGTATAGGTGTAGATACTGAATaGTCCTTCCCTTCTGCTTTT | + |
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Preference number: 3 (lower is better) Translates to: IFSRYLFRYPLRSSTGSIGVDTE*SFPSAF Trigger: AAAAGCAGAAGGGAAGGACAATTCAGTATCTACACC...TATACTTCCAGTGGAAGACCTGAGAGGGTACCTGAAGAGATACCGGGAAAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR CCA 72 bp | TTCCAAATAAGGAGACTTCTATCGAAGAGGGCTTGGTaGCATGTTTCCAATATTTTCCCGGTATCTCTTCAG | + |
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Preference number: 3 (lower is better) Translates to: FQIRRLLSKRAW*HVSNIFPVSLQ Trigger: CTGAAGAGATACCGGGAAAATATTGGAAACATGCCACCAAGCCCTCTTCGATAGAAGTCTCCTTATTTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR-3UTR CAA 90 bp | GCAGTGGCGGAAGCAATACTTACCTGTAAGGATTTCTTGAGGATTATTAGAGAATCTATCGAAGAGGGCTaGGTGGCATGTTTCCAATAT | + |
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Preference number: 3 (lower is better) Translates to: AVAEAILTCKDFLRIIRESIEEG*VACFQY Trigger: ATATTGGAAACATGCCACCAAGCCCTCTTCGATAGA...TTCTCTAATAATCCTCAAGAAATCCTTACAGGTAAGTATTGCTTCCGCCACTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR-3UTR CAA 90 bp | ATATTTTCCCGGTATCTCTTCAGGTACCCTCTCAGGTCTTCCACTGGAAGTATAATTATCATACTGTTTTaGCAACTTGTAGGCATTGGG | + |
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Preference number: 3 (lower is better) Translates to: IFSRYLFRYPLRSSTGSIIIILF*QLVGIG Trigger: CCCAATGCCTACAAGTTGCAAAAACAGTATGATAAT...TATACTTCCAGTGGAAGACCTGAGAGGGTACCTGAAGAGATACCGGGAAAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR TCA 72 bp | TTACTATTAATCTCAAGAGCCAACTGGTGTAGATACTaGATTGTCCTTCCCTTCTGCTTTTCAAACTCCTTG | + |
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Preference number: 3 (lower is better) Translates to: LLLISRANWCRY*IVLPFCFSNSL Trigger: CAAGGAGTTTGAAAAGCAGAAGGGAAGGACAATTCAGTATCTACACCAGTTGGCTCTTGAGATTAATAGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| 3UTR TCA 72 bp | CAGTGGCGGAAGCAATACTTACCTGTAAGGATTTCTTaGGGATTATTAGAGAAAGAAAGGATCCAGTATAGA | + |
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Preference number: 3 (lower is better) Translates to: QWRKQYLPVRIS*GLLEKERIQYR Trigger: TCTATACTGGATCCTTTCTTTCTCTAATAATCCTCAAGAAATCCTTACAGGTAAGTATTGCTTCCGCCACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| CDS-3UTR CCA 90 bp | TTTTCCCGGTATCTCTTCAGGTACCCTCTCAGGTCTTCCACTGGAAGTATACTACATAAGCTCGCGCGCTaGCTCCTCCCCTGGCACCAT | + |
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Preference number: 4 (lower is better) Translates to: FSRYLFRYPLRSSTGSILHKLAR*LLPWHH Trigger: ATGGTGCCAGGGGAGGAGCCAGCGCGCGAGCTTATG...TAGTATACTTCCAGTGGAAGACCTGAGAGGGTACCTGAAGAGATACCGGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| CDS-3UTR CCA 90 bp | CTGGTCAGGGAAATACTCCAAGCATTCAATTGCTGCATTAAGCCAGTTATCGATTGGCCCGTTCAGCCCTaGGCCCGGAAGCTCGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LVREILQAFNCCIKPVIDWPVQP*ARKLVL Trigger: CAGAACGAGCTTCCGGGCCCAGGGCTGAACGGGCCA...ATCGATAACTGGCTTAATGCAGCAATTGAATGCTTGGAGTATTTCCCTGACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299185.12 |
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| CDS-3UTR CCA 90 bp | CTGGTCAGGGAAATACTCCAAGCATTCAATTGCTGCATTAAGCCAGTTATCGATCATAAGCTCGCGCGCTaGCTCCTCCCCTGGCACCAT | + |
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Preference number: 4 (lower is better) Translates to: LVREILQAFNCCIKPVIDHKLAR*LLPWHH Trigger: ATGGTGCCAGGGGAGGAGCCAGCGCGCGAGCTTATG...ATCGATAACTGGCTTAATGCAGCAATTGAATGCTTGGAGTATTTCCCTGACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299185.12 |
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| CDS-3UTR CCA 90 bp | CCTTCCTCTGTAATTCTACCACTTTGGGTGGCCAAGGTAGGGAGATGGCTTGAGGCAACTTGTAGGCATTaGGCTCTGATGCCATTGCCA | + |
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Preference number: 4 (lower is better) Translates to: PSSVILPLWVAKVGRWLEATCRH*ALMPLP Trigger: TGGCAATGGCATCAGAGCCCAATGCCTACAAGTTGC...CTCAAGCCATCTCCCTACCTTGGCCACCCAAAGTGGTAGAATTACAGAGGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| CDS-3UTR CCA 90 bp | GCCATTGCCATAAAAGTAAGTAGCCGTCGTAATTCTTCTCTAATGTTCAGCAACCATAAGCTCGCGCGCTaGCTCCTCCCCTGGCACCAT | + |
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Preference number: 4 (lower is better) Translates to: AIAIKVSSRRNSSLMFSNHKLAR*LLPWHH Trigger: ATGGTGCCAGGGGAGGAGCCAGCGCGCGAGCTTATG...GTTGCTGAACATTAGAGAAGAATTACGACGGCTACTTACTTTTATGGCAATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378244.6 ENST00000416321.5 |
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| CDS-3UTR CCA 90 bp | CTGGAGGCTCCAAAATATTGTCCAAGAATGGAAGGTGAATCAATTGAAGAAGACCATAAGCTCGCGCGCTaGCTCCTCCCCTGGCACCAT | + |
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Preference number: 4 (lower is better) Translates to: LEAPKYCPRMEGESIEEDHKLAR*LLPWHH Trigger: ATGGTGCCAGGGGAGGAGCCAGCGCGCGAGCTTATG...GTCTTCTTCAATTGATTCACCTTCCATTCTTGGACAATATTTTGGAGCCTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299185.12 ENST00000549341.1 |
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| CDS-3UTR TCA 90 bp | AGTATCCTAAGCTGTAGATGTGTAGCTGTTATTTTCAGCCATACCTTGAAGAGCGATCTCCTGACCTCGTaGTCTGCCTGTCTCGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SILSCRCVAVIFSHTLKSDLLTS*SACLGL Trigger: GAGGCCGAGACAGGCAGATCACGAGGTCAGGAGATC...GCTCTTCAAGGTATGGCTGAAAATAACAGCTACACATCTACAGCTTAGGATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| CDS-3UTR TCA 90 bp | ATATTTTCCCGGTATCTCTTCAGGTACCCTCTCAGGTCTTCCACTGGAAGTATAGAAGCTCGTTCTGACTaGCAAGTCTACGGAACCTCG | + |
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Preference number: 4 (lower is better) Translates to: IFSRYLFRYPLRSSTGSIEARSD*QVYGTS Trigger: CGAGGTTCCGTAGACTTGTCAGTCAGAACGAGCTTC...TATACTTCCAGTGGAAGACCTGAGAGGGTACCTGAAGAGATACCGGGAAAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| CDS-3UTR TCA 90 bp | ATATTTTCCCGGTATCTCTTCAGGTACCCTCTCAGGTCTTCCACTGGAAGTATAGGTAGGGAGATGGCTTaGGTCCAGGAGTTTGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: IFSRYLFRYPLRSSTGSIGREMA*VQEFEV Trigger: AACCTCAAACTCCTGGACTCAAGCCATCTCCCTACC...TATACTTCCAGTGGAAGACCTGAGAGGGTACCTGAAGAGATACCGGGAAAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| CDS-3UTR CCA 90 bp | ACTTCTATCGAAGAGGGCTTGGTGGCATGTTTCCAATATTTTCCCGGTATCTCTTCTGTCCACCCAGGCTaGAATGCAGTAGTGGGATCA | + |
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Preference number: 4 (lower is better) Translates to: TSIEEGLVACFQYFPGISSVHPG*NAVVGS Trigger: TGATCCCACTACTGCATTCCAGCCTGGGTGGACAGA...AGAGATACCGGGAAAATATTGGAAACATGCCACCAAGCCCTCTTCGATAGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| CDS-3UTR GCA 90 bp | TATTTTCCCGGTATCTCTTCAGGTACCCTCTCAGGTCTTCCACTGGAAGTATACACAGTTCATTGCAGCTaGAGACTCCTGCGTTTAAGC | + |
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Preference number: 4 (lower is better) Translates to: YFPGISSGTLSGLPLEVYTVHCS*RLLRLS Trigger: GCTTAAACGCAGGAGTCTGCAGCTGCAATGAACTGT...GTATACTTCCAGTGGAAGACCTGAGAGGGTACCTGAAGAGATACCGGGAAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| CDS-3UTR TCA 90 bp | GCCATTGCCATAAAAGTAAGTAGCCGTCGTAATTCTTCTCTAATGTTCAGCAACGAAGCTCGTTCTGACTaGCAAGTCTACGGAACCTCG | + |
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Preference number: 4 (lower is better) Translates to: AIAIKVSSRRNSSLMFSNEARSD*QVYGTS Trigger: CGAGGTTCCGTAGACTTGTCAGTCAGAACGAGCTTC...GTTGCTGAACATTAGAGAAGAATTACGACGGCTACTTACTTTTATGGCAATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378244.6 ENST00000416321.5 |
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| CDS-3UTR TCA 90 bp | TACTCCAAGCATTCAATTGCTGCATTAAGCCAGTTATCGATTTCAGGTAGACATCCCGGAAGCTCGTTCTaGCTGACAAGTCTACGGAAC | + |
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Preference number: 4 (lower is better) Translates to: YSKHSIAALSQLSISGRHPGSSF*LTSLRN Trigger: GTTCCGTAGACTTGTCAGTCAGAACGAGCTTCCGGG...ATGTCTACCTGAAATCGATAACTGGCTTAATGCAGCAATTGAATGCTTGGAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299185.12 |
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| CDS-3UTR TCA 90 bp | TATTTTCCCGGTATCTCTTCAGGTACCCTCTCAGGTCTTCCACTGGAAGTATACAACTGGTGTAGATACTaGATTGTCCTTCCCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: YFPGISSGTLSGLPLEVYNWCRY*IVLPFC Trigger: GCAGAAGGGAAGGACAATTCAGTATCTACACCAGTT...GTATACTTCCAGTGGAAGACCTGAGAGGGTACCTGAAGAGATACCGGGAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| CDS-3UTR TCA 90 bp | TTTTCCCGGTATCTCTTCAGGTACCCTCTCAGGTCTTCCACTGGAAGTATACTAGCCCGGCCTAACTTGTaGATCTTTAATCCAAATGGT | + |
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Preference number: 4 (lower is better) Translates to: FSRYLFRYPLRSSTGSILARPNL*IFNPNG Trigger: ACCATTTGGATTAAAGATTCACAAGTTAGGCCGGGC...TAGTATACTTCCAGTGGAAGACCTGAGAGGGTACCTGAAGAGATACCGGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| CDS-3UTR GCA 90 bp | ATCCTCCTGCCTCAGCCTTCCTCTGTAATTCTACCACTTTGGGTGGCCAAGGTACGTAAGATGATTTATTaGCTAGAAACCTGTAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ILLPQPSSVILPLWVAKVRKMIY*LETCRD Trigger: GTCTCTACAGGTTTCTAGGCAATAAATCATCTTACG...TACCTTGGCCACCCAAAGTGGTAGAATTACAGAGGAAGGCTGAGGCAGGAGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378244.6 |
||
| CDS-3UTR GCA 90 bp | GCCATTGCCATAAAAGTAAGTAGCCGTCGTAATTCTTCTCTAATGTTCAGCAACCCACCCAGGCTGGAATaGAGTAGTGGGATCACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AIAIKVSSRRNSSLMFSNPPRLE*SSGITV Trigger: AACTGTGATCCCACTACTGCATTCCAGCCTGGGTGG...GTTGCTGAACATTAGAGAAGAATTACGACGGCTACTTACTTTTATGGCAATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
||
| CDS-3UTR GCA 90 bp | AGTATCCTAAGCTGTAGATGTGTAGCTGTTATTTTCAGCCATACCTTGAAGAGCTTCACGCCATTCTCCTaGCTCAGCCTTCCAAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SILSCRCVAVIFSHTLKSFTPFS*LSLPSS Trigger: GCTACTTGGAAGGCTGAGGCAGGAGAATGGCGTGAA...GCTCTTCAAGGTATGGCTGAAAATAACAGCTACACATCTACAGCTTAGGATACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
||
| CDS-3UTR CCA 90 bp | GCCATTGCCATAAAAGTAAGTAGCCGTCGTAATTCTTCTCTAATGTTCAGCAACCCTTTACCAAAGCACTaGCTTTCGCCTCTGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AIAIKVSSRRNSSLMFSNPLPKH*LSPLQW Trigger: CCACTGCAGAGGCGAAAGCCAGTGCTTTGGTAAAGG...GTTGCTGAACATTAGAGAAGAATTACGACGGCTACTTACTTTTATGGCAATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
||
| CDS-3UTR TCA 90 bp | ACTTCTATCGAAGAGGGCTTGGTGGCATGTTTCCAATATTTTCCCGGTATCTCTTTTTCAGCCATACCTTaGAGAGCTCAGAGTGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: TSIEEGLVACFQYFPGISFSAIP*RAQSGT Trigger: AGTACCACTCTGAGCTCTTCAAGGTATGGCTGAAAA...AGAGATACCGGGAAAATATTGGAAACATGCCACCAAGCCCTCTTCGATAGAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378244.6 |
||
| CDS-3UTR GCA 90 bp | CTGCCCGCACTTTTAATAATGATTTGGCTTGCAAAACTGATTTGGCAAGAGTTTTTAGGATTGCGTCACTaGACTCCAGCCTGGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LPALLIMIWLAKLIWQEFLGLRH*TPAWAT Trigger: TGTTGCCCAGGCTGGAGTGCAGTGACGCAATCCTAA...AAACTCTTGCCAAATCAGTTTTGCAAGCCAAATCATTATTAAAAGTGCGGGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000378244.6 |
||
| CDS-3UTR CCA 90 bp | TTTTCCCGGTATCTCTTCAGGTACCCTCTCAGGTCTTCCACTGGAAGTATACTATCGAAGAGGGCTTGGTaGCATGTTTCCAATATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSRYLFRYPLRSSTGSILSKRAW*HVSNIF Trigger: GAAAATATTGGAAACATGCCACCAAGCCCTCTTCGA...TAGTATACTTCCAGTGGAAGACCTGAGAGGGTACCTGAAGAGATACCGGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378244.6 |
||
| CDS-3UTR CCA 90 bp | TTTTCCCGGTATCTCTTCAGGTACCCTCTCAGGTCTTCCACTGGAAGTATACTACTATCGAAGAGGGCTTaGTGGCATGTTTCCAATATT | + |
|
Preference number: 4 (lower is better) Translates to: FSRYLFRYPLRSSTGSILLSKRA*WHVSNI Trigger: AATATTGGAAACATGCCACCAAGCCCTCTTCGATAG...TAGTATACTTCCAGTGGAAGACCTGAGAGGGTACCTGAAGAGATACCGGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
||
| CDS-3UTR CCA 90 bp | GCCATTGCCATAAAAGTAAGTAGCCGTCGTAATTCTTCTCTAATGTTCAGCAACCTTTCGCCTCTGCAGTaGCGGAAGCAATACTTACCT | + |
|
Preference number: 4 (lower is better) Translates to: AIAIKVSSRRNSSLMFSNLSPLQ*RKQYLP Trigger: AGGTAAGTATTGCTTCCGCCACTGCAGAGGCGAAAG...GTTGCTGAACATTAGAGAAGAATTACGACGGCTACTTACTTTTATGGCAATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
||
| CDS-3UTR TCA 90 bp | TTTAACTGGAGGCTCCAAAATATTGTCCAAGAATGGAAGGTGAATCAATTGAAGGAAGCTCGTTCTGACTaGCAAGTCTACGGAACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FNWRLQNIVQEWKVNQLKEARSD*QVYGTS Trigger: CGAGGTTCCGTAGACTTGTCAGTCAGAACGAGCTTC...CTTCAATTGATTCACCTTCCATTCTTGGACAATATTTTGGAGCCTCCAGTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299185.12 ENST00000549341.1 |
||
| CDS-3UTR TCA 90 bp | TATTTTCCCGGTATCTCTTCAGGTACCCTCTCAGGTCTTCCACTGGAAGTATACCCAAACATCTTCTTTTaGAAGCCGGAGAAAAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YFPGISSGTLSGLPLEVYPNIFF*KPEKRF Trigger: AAACCTTTTCTCCGGCTTTCAAAAGAAGATGTTTGG...GTATACTTCCAGTGGAAGACCTGAGAGGGTACCTGAAGAGATACCGGGAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378244.6 |
||
| CDS-3UTR TCA 90 bp | ATATTTTCCCGGTATCTCTTCAGGTACCCTCTCAGGTCTTCCACTGGAAGTATAAGAACTTGGCAAAGATaGACCCCTTTAAGACAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IFSRYLFRYPLRSSTGSIRTWQR*TPLRQE Trigger: CTCTTGTCTTAAAGGGGTTCATCTTTGCCAAGTTCT...TATACTTCCAGTGGAAGACCTGAGAGGGTACCTGAAGAGATACCGGGAAAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378244.6 |
||
| CDS-3UTR GCA 90 bp | CAAATGGTATTAAGACTTTCTGTGTTAAAGCCAGAAAGACTAGGACCTTTACCAACTGGCTTTCGCCTCTaGAGTGGCGGAAGCAATACT | + |
|
Preference number: 4 (lower is better) Translates to: QMVLRLSVLKPERLGPLPTGFRL*SGGSNT Trigger: AGTATTGCTTCCGCCACTGCAGAGGCGAAAGCCAGT...TGGTAAAGGTCCTAGTCTTTCTGGCTTTAACACAGAAAGTCTTAATACCATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378244.6 |
||
| CDS-3UTR TCA 90 bp | TGCTATGACATCAAAGAGTATCTTCTTCTGACTGTTCAATCTTGTCTCTTCATTGAAGCTCGTTCTGACTaGCAAGTCTACGGAACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: CYDIKEYLLLTVQSCLFIEARSD*QVYGTS Trigger: CGAGGTTCCGTAGACTTGTCAGTCAGAACGAGCTTC...AATGAAGAGACAAGATTGAACAGTCAGAAGAAGATACTCTTTGATGTCATAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299185.12 |
||
| CDS-3UTR TCA 90 bp | CAAGAGCCAACTGGTGTAGATACTGAATTGTCCTTCCCTTCTGCTTTTCAAACTGTCTCAAGGTTTCATTaGACTCATTCTCAGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: QEPTGVDTELSFPSAFQTVSRFH*THSQHP Trigger: AGGATGCTGAGAATGAGTTCAATGAAACCTTGAGAC...AGTTTGAAAAGCAGAAGGGAAGGACAATTCAGTATCTACACCAGTTGGCTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
||
| CDS-3UTR CCA 90 bp | AGCCGTCGTAATTCTTCTCTAATGTTCAGCAACAGCAATCTTAGATATAGTTGTGCAACTTGTAGGCATTaGGCTCTGATGCCATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRRNSSLMFSNSNLRYSCATCRH*ALMPLP Trigger: TGGCAATGGCATCAGAGCCCAATGCCTACAAGTTGC...ACAACTATATCTAAGATTGCTGTTGCTGAACATTAGAGAAGAATTACGACGGCT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378244.6 ENST00000416321.5 |
||
| CDS-3UTR TCA 90 bp | GCCATTGCCATAAAAGTAAGTAGCCGTCGTAATTCTTCTCTAATGTTCAGCAACCAGCATCAGAACCAGTaGAACAGTCTTTGTATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AIAIKVSSRRNSSLMFSNQHQNQ*NSLCMS Trigger: AGACATACAAAGACTGTTTCACTGGTTCTGATGCTG...GTTGCTGAACATTAGAGAAGAATTACGACGGCTACTTACTTTTATGGCAATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378244.6 ENST00000416321.5 |
||
| CDS-3UTR TCA 90 bp | GCCATTGCCATAAAAGTAAGTAGCCGTCGTAATTCTTCTCTAATGTTCAGCAACGTCTCAAGGTTTCATTaGACTCATTCTCAGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: AIAIKVSSRRNSSLMFSNVSRFH*THSQHP Trigger: AGGATGCTGAGAATGAGTTCAATGAAACCTTGAGAC...GTTGCTGAACATTAGAGAAGAATTACGACGGCTACTTACTTTTATGGCAATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378244.6 ENST00000416321.5 |
||
| CDS-3UTR CCA 90 bp | TACTCCAGTGGAAACCAGACCAGTTGTTCTGCCCGCACTTTTAATAATGATTTGCTTGCAAAACTGATTTaGCAAGAGTTTTCAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: YSSGNQTSCSARTFNNDLLAKLI*QEFSGP Trigger: TGGTCCTGAAAACTCTTGCCAAATCAGTTTTGCAAG...CAAATCATTATTAAAAGTGCGGGCAGAACAACTGGTCTGGTTTCCACTGGAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378244.6 |
||
| CDS-3UTR TCA 90 bp | GCCATTGCCATAAAAGTAAGTAGCCGTCGTAATTCTTCTCTAATGTTCAGCAACCGGAGAAAAGGTTTCTaGACTGTGATATTTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: AIAIKVSSRRNSSLMFSNRRKGF*TVIFGH Trigger: ATGTCCAAATATCACAGTTCAGAAACCTTTTCTCCG...GTTGCTGAACATTAGAGAAGAATTACGACGGCTACTTACTTTTATGGCAATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378244.6 ENST00000416321.5 |
||
| CDS-3UTR TCA 90 bp | GCCATTGCCATAAAAGTAAGTAGCCGTCGTAATTCTTCTCTAATGTTCAGCAACGTGTTTTGCATAAGATaGCTTAAGACCACATCGACA | + |
|
Preference number: 4 (lower is better) Translates to: AIAIKVSSRRNSSLMFSNVFCIR*LKTTST Trigger: TGTCGATGTGGTCTTAAGTCATCTTATGCAAAACAC...GTTGCTGAACATTAGAGAAGAATTACGACGGCTACTTACTTTTATGGCAATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378244.6 ENST00000416321.5 |
||
| CDS-3UTR TCA 90 bp | TCTGATGCCATTGCCATAAAAGTAAGTAGCCGTCGTAATTCTTCTCTAATGTTCAGAACTTGGCAAAGATaGACCCCTTTAAGACAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SDAIAIKVSSRRNSSLMFRTWQR*TPLRQE Trigger: CTCTTGTCTTAAAGGGGTTCATCTTTGCCAAGTTCT...GAACATTAGAGAAGAATTACGACGGCTACTTACTTTTATGGCAATGGCATCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378244.6 ENST00000416321.5 |
||
| CDS-3UTR GCA 90 bp | GCCATTGCCATAAAAGTAAGTAGCCGTCGTAATTCTTCTCTAATGTTCAGCAACGACAAGAGATGTCATTaGTACTTAGGCACGTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AIAIKVSSRRNSSLMFSNDKRCH*YLGTCF Trigger: AAAACACGTGCCTAAGTAGCAATGACATCTCTTGTC...GTTGCTGAACATTAGAGAAGAATTACGACGGCTACTTACTTTTATGGCAATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378244.6 ENST00000416321.5 |
||
| CDS-3UTR TCA 90 bp | TACTCCAAGCATTCAATTGCTGCATTAAGCCAGTTATCGATTTCAGGTAGACATCGGAGAAAAGGTTTCTaGACTGTGATATTTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: YSKHSIAALSQLSISGRHRRKGF*TVIFGH Trigger: ATGTCCAAATATCACAGTTCAGAAACCTTTTCTCCG...ATGTCTACCTGAAATCGATAACTGGCTTAATGCAGCAATTGAATGCTTGGAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299185.12 |
||
| CDS-3UTR TCA 90 bp | TCTGATGCCATTGCCATAAAAGTAAGTAGCCGTCGTAATTCTTCTCTAATGTTCCGGAGAAAAGGTTTCTaGACTGTGATATTTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: SDAIAIKVSSRRNSSLMFRRKGF*TVIFGH Trigger: ATGTCCAAATATCACAGTTCAGAAACCTTTTCTCCG...GAACATTAGAGAAGAATTACGACGGCTACTTACTTTTATGGCAATGGCATCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378244.6 ENST00000416321.5 |
||
| CDS-3UTR TCA 90 bp | TCTGATGCCATTGCCATAAAAGTAAGTAGCCGTCGTAATTCTTCTCTAATGTTCCCAAACATCTTCTTTTaGAAGCCGGAGAAAAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SDAIAIKVSSRRNSSLMFPNIFF*KPEKRF Trigger: AAACCTTTTCTCCGGCTTTCAAAAGAAGATGTTTGG...GAACATTAGAGAAGAATTACGACGGCTACTTACTTTTATGGCAATGGCATCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000378244.6 ENST00000416321.5 |
||
| CDS-3UTR TCA 90 bp | AGCCGTCGTAATTCTTCTCTAATGTTCAGCAACAGCAATCTTAGATATAGTTGTCAGCATCAGAACCAGTaGAACAGTCTTTGTATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRRNSSLMFSNSNLRYSCQHQNQ*NSLCMS Trigger: AGACATACAAAGACTGTTTCACTGGTTCTGATGCTG...ACAACTATATCTAAGATTGCTGTTGCTGAACATTAGAGAAGAATTACGACGGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378244.6 ENST00000416321.5 |
||
| CDS-3UTR TCA 90 bp | CTGCCCGCACTTTTAATAATGATTTGGCTTGCAAAACTGATTTGGCAAGAGTTTTTTGGCTTGCAAAACTaGTTTGGCAAGAGTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPALLIMIWLAKLIWQEFFGLQN*FGKSFQ Trigger: CTGAAAACTCTTGCCAAATCAGTTTTGCAAGCCAAA...AAACTCTTGCCAAATCAGTTTTGCAAGCCAAATCATTATTAAAAGTGCGGGCAG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENST00000378244.6 |
||
| CDS-3UTR CCA 90 bp | CTGCCCGCACTTTTAATAATGATTTGGCTTGCAAAACTGATTTGGCAAGAGTTTTTGTATGTCAAGGGTTaGCAAAACGTAAAGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: LPALLIMIWLAKLIWQEFLYVKG*QNVKPC Trigger: ACATGGCTTTACGTTTTGCCAACCCTTGACATACAA...AAACTCTTGCCAAATCAGTTTTGCAAGCCAAATCATTATTAAAAGTGCGGGCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000378244.6 |
||
| CDS-3UTR TCA 90 bp | AGCCGTCGTAATTCTTCTCTAATGTTCAGCAACAGCAATCTTAGATATAGTTGTGTGTTTTGCATAAGATaGCTTAAGACCACATCGACA | + |
|
Preference number: 4 (lower is better) Translates to: SRRNSSLMFSNSNLRYSCVFCIR*LKTTST Trigger: TGTCGATGTGGTCTTAAGTCATCTTATGCAAAACAC...ACAACTATATCTAAGATTGCTGTTGCTGAACATTAGAGAAGAATTACGACGGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378244.6 ENST00000416321.5 |
||
| CDS-3UTR GCA 90 bp | AGCCGTCGTAATTCTTCTCTAATGTTCAGCAACAGCAATCTTAGATATAGTTGTGACAAGAGATGTCATTaGTACTTAGGCACGTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SRRNSSLMFSNSNLRYSCDKRCH*YLGTCF Trigger: AAAACACGTGCCTAAGTAGCAATGACATCTCTTGTC...ACAACTATATCTAAGATTGCTGTTGCTGAACATTAGAGAAGAATTACGACGGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378244.6 ENST00000416321.5 |
||
| CDS-3UTR GCA 90 bp | TTTAACTGGAGGCTCCAAAATATTGTCCAAGAATGGAAGGTGAATCAATTGAAGCAAGCATTCAATTGCTaGATTAAGCCAGTTATCGAT | + |
|
Preference number: 4 (lower is better) Translates to: FNWRLQNIVQEWKVNQLKQAFNC*IKPVID Trigger: ATCGATAACTGGCTTAATGCAGCAATTGAATGCTTG...CTTCAATTGATTCACCTTCCATTCTTGGACAATATTTTGGAGCCTCCAGTTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299185.12 |
||
| CDS-3UTR GCA 90 bp | CAAATGGTATTAAGACTTTCTGTGTTAAAGCCAGAAAGACTAGGACCTTTACCATTGTGTTGCTTCAAGTaGTTCTGCTCTTTTCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: QMVLRLSVLKPERLGPLPLCCFK*FCSFLI Trigger: AATGAGAAAAGAGCAGAAGCACTTGAAGCAACACAA...TGGTAAAGGTCCTAGTCTTTCTGGCTTTAACACAGAAAGTCTTAATACCATTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
||
| CDS-3UTR GCA 90 bp | AGCCGTCGTAATTCTTCTCTAATGTTCAGCAACAGCAATCTTAGATATAGTTGTTTGTGTTGCTTCAAGTaGTTCTGCTCTTTTCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: SRRNSSLMFSNSNLRYSCLCCFK*FCSFLI Trigger: AATGAGAAAAGAGCAGAAGCACTTGAAGCAACACAA...ACAACTATATCTAAGATTGCTGTTGCTGAACATTAGAGAAGAATTACGACGGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378244.6 ENST00000416321.5 |
||
| CDS-3UTR GCA 90 bp | CATTTTTCAGGTAGACATAAGCTTGGAATAAGTTCTCTGTCTAGGCAAGTGTTATTGTGTTGCTTCAAGTaGTTCTGCTCTTTTCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: HFSGRHKLGISSLSRQVLLCCFK*FCSFLI Trigger: AATGAGAAAAGAGCAGAAGCACTTGAAGCAACACAA...TAACACTTGCCTAGACAGAGAACTTATTCCAAGCTTATGTCTACCTGAAAAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000549341.1 |
||
| CDS-3UTR CCA 90 bp | TTTAACTGGAGGCTCCAAAATATTGTCCAAGAATGGAAGGTGAATCAATTGAAGACTGTAACTATTAACTaGTCAGGGAAATACTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FNWRLQNIVQEWKVNQLKTVTIN*SGKYSK Trigger: CTTGGAGTATTTCCCTGACCAGTTAATAGTTACAGT...CTTCAATTGATTCACCTTCCATTCTTGGACAATATTTTGGAGCCTCCAGTTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299185.12 |
||
| CDS-3UTR GCA 90 bp | TGCTATGACATCAAAGAGTATCTTCTTCTGACTGTTCAATCTTGTCTCTTCATTTTGTGTTGCTTCAAGTaGTTCTGCTCTTTTCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: CYDIKEYLLLTVQSCLFILCCFK*FCSFLI Trigger: AATGAGAAAAGAGCAGAAGCACTTGAAGCAACACAA...AATGAAGAGACAAGATTGAACAGTCAGAAGAAGATACTCTTTGATGTCATAGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299185.12 |
||
| CDS-3UTR GCA 90 bp | CGTAATTCTTCTCTAATGTTCAGCAACAGCAATCTTAGATATAGTTGTGTTGCTCGTAAGATGATTTATTaGCTAGAAACCTGTAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RNSSLMFSNSNLRYSCVARKMIY*LETCRD Trigger: GTCTCTACAGGTTTCTAGGCAATAAATCATCTTACG...AGCAACACAACTATATCTAAGATTGCTGTTGCTGAACATTAGAGAAGAATTACG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378244.6 ENST00000416321.5 |
||
| CDS CCA 90 bp | CCTGGTCTGTCCTCCTTTTCCGGCAGAAGCCATCTCTACGGTTCCTaGAACTTGGCCCGTTCAGCCCTGGGCCCGGAAGCTCGTTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: PGLSSFSGRSHLYGS*NLARSALGPEARSD Trigger: GTCAGAACGAGCTTCCGGGCCCAGGGCTGAACGGGCCAAGTTCCAGGAACCGTAGAGATGGCTTCTGCCGGAAAAGGAGGACAGACCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299185.12 ENST00000549341.1 |
||
| CDS CCA 90 bp | GAACCCCTGTCCTCCTTTTCCGGCAGAAGCCATCTCTACGGTTCCTaGAACTTGGCCCGTTCAGCCCTGGGCCCGGAAGCTCGTTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: EPLSSFSGRSHLYGS*NLARSALGPEARSD Trigger: GTCAGAACGAGCTTCCGGGCCCAGGGCTGAACGGGCCAAGTTCCAGGAACCGTAGAGATGGCTTCTGCCGGAAAAGGAGGACAGGGGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549249.5 |
||
| CDS CCA 90 bp | GCAGAAGCCATCTCTACGGTTCCTGGAACTTGGCCCGTTCAGCCCTaGGCCCGGAAGCTCGTTCTGACTGACAAGTCTACGGAACCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: AEAISTVPGTWPVQP*ARKLVLTDKSTEPR Trigger: CCGAGGTTCCGTAGACTTGTCAGTCAGAACGAGCTTCCGGGCCCAGGGCTGAACGGGCCAAGTTCCAGGAACCGTAGAGATGGCTTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000299185.12 ENST00000378244.6 ENST00000416321.5 ENST00000549249.5 ENST00000549341.1 ENST00000550587.6 ENST00000551642.1 |
||
| CDS CCA 90 bp | AGCATCCTGTCCTCCTTTTCCGGCAGAAGCCATCTCTACGGTTCCTaGAACTTGGCCCGTTCAGCCCTGGGCCCGGAAGCTCGTTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SILSSFSGRSHLYGS*NLARSALGPEARSD Trigger: GTCAGAACGAGCTTCCGGGCCCAGGGCTGAACGGGCCAAGTTCCAGGAACCGTAGAGATGGCTTCTGCCGGAAAAGGAGGACAGGATGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000378244.6 ENST00000416321.5 ENST00000550587.6 ENST00000551642.1 |
||
| CDS TCA 90 bp | TTCCTGGAACTTGGCCCGTTCAGCCCTGGGCCCGGAAGCTCGTTCTaGCTGACAAGTCTACGGAACCTCGGAGTCAAAAGAACCGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: FLELGPFSPGPGSSF*LTSLRNLGVKRTAI Trigger: TATGGCGGTTCTTTTGACTCCGAGGTTCCGTAGACTTGTCAGTCAGAACGAGCTTCCGGGCCCAGGGCTGAACGGGCCAAGTTCCAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000299185.12 ENST00000378244.6 ENST00000416321.5 ENST00000549249.5 ENST00000549341.1 ENST00000550587.6 ENST00000551642.1 |
||
| CDS-3UTR CAA 90 bp | TTTTCCCGGTATCTCTTCAGGTACCCTCTCAGGTCTTCCACTGGAAGTATACTATACGGTTCCTGGAACTaGGCCCGTTCAGCCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FSRYLFRYPLRSSTGSILYGSWN*ARSALG Trigger: GCCCAGGGCTGAACGGGCCAAGTTCCAGGAACCGTA...TAGTATACTTCCAGTGGAAGACCTGAGAGGGTACCTGAAGAGATACCGGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
||
| CDS-3UTR CAA 90 bp | CTGGTCAGGGAAATACTCCAAGCATTCAATTGCTGCATTAAGCCAGTTATCGATTACGGTTCCTGGAACTaGGCCCGTTCAGCCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVREILQAFNCCIKPVIDYGSWN*ARSALG Trigger: GCCCAGGGCTGAACGGGCCAAGTTCCAGGAACCGTA...ATCGATAACTGGCTTAATGCAGCAATTGAATGCTTGGAGTATTTCCCTGACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299185.12 |
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| CDS-3UTR CAA 90 bp | CTGGAGGCTCCAAAATATTGTCCAAGAATGGAAGGTGAATCAATTGAAGAAGACTACGGTTCCTGGAACTaGGCCCGTTCAGCCCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: LEAPKYCPRMEGESIEEDYGSWN*ARSALG Trigger: GCCCAGGGCTGAACGGGCCAAGTTCCAGGAACCGTA...GTCTTCTTCAATTGATTCACCTTCCATTCTTGGACAATATTTTGGAGCCTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299185.12 ENST00000549341.1 |
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| CDS-3UTR CAA 90 bp | AGCCGTCGTAATTCTTCTCTAATGTTCAGCAACAGCAATCTTAGATATAGTTGTTACGGTTCCTGGAACTaGGCCCGTTCAGCCCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: SRRNSSLMFSNSNLRYSCYGSWN*ARSALG Trigger: GCCCAGGGCTGAACGGGCCAAGTTCCAGGAACCGTA...ACAACTATATCTAAGATTGCTGTTGCTGAACATTAGAGAAGAATTACGACGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378244.6 ENST00000416321.5 |
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| CDS-3UTR CAA 90 bp | CCTTCCTCTGTAATTCTACCACTTTGGGTGGCCAAGGTAGGGAGATGGCTTGAGGGTGTAGATACTGAATaGTCCTTCCCTTCTGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: PSSVILPLWVAKVGRWLEGVDTE*SFPSAF Trigger: AAAAGCAGAAGGGAAGGACAATTCAGTATCTACACC...CTCAAGCCATCTCCCTACCTTGGCCACCCAAAGTGGTAGAATTACAGAGGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| CDS-3UTR CAA 90 bp | CTGCCCGCACTTTTAATAATGATTTGGCTTGCAAAACTGATTTGGCAAGAGTTTTACAGTCAGTTAGGATaGCGTCACTGCACTCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: LPALLIMIWLAKLIWQEFYSQLG*RHCTPA Trigger: GGCTGGAGTGCAGTGACGCAATCCTAACTGACTGTA...AAACTCTTGCCAAATCAGTTTTGCAAGCCAAATCATTATTAAAAGTGCGGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| CDS-3UTR CAA 90 bp | TACTCCAGTGGAAACCAGACCAGTTGTTCTGCCCGCACTTTTAATAATGATTTGGCTTGCAAAACTGATTaGGCAAGAGTTTTCAGGACC | + |
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Preference number: 5 (lower is better) Translates to: YSSGNQTSCSARTFNNDLACKTD*ARVFRT Trigger: GGTCCTGAAAACTCTTGCCAAATCAGTTTTGCAAGC...CAAATCATTATTAAAAGTGCGGGCAGAACAACTGGTCTGGTTTCCACTGGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| CDS-3UTR CAA 90 bp | TACTCCAGTGGAAACCAGACCAGTTGTTCTGCCCGCACTTTTAATAATGATTTGCTTGTATGTCAAGGGTaGGCAAAACGTAAAGCCATG | + |
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Preference number: 5 (lower is better) Translates to: YSSGNQTSCSARTFNNDLLVCQG*AKRKAM Trigger: CATGGCTTTACGTTTTGCCAACCCTTGACATACAAG...CAAATCATTATTAAAAGTGCGGGCAGAACAACTGGTCTGGTTTCCACTGGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| CDS TCA 90 bp | AGACAAGAGATGTCATTGCTACTTAGGCACGTGTTTTGCATAAGATaGCTTAAGACCACATCGACAGCATCAGAACCAGTGAAACAGTCT | + |
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Preference number: 5 (lower is better) Translates to: RQEMSLLLRHVFCIR*LKTTSTASEPVKQS Trigger: AGACTGTTTCACTGGTTCTGATGCTGTCGATGTGGTCTTAAGTCATCTTATGCAAAACACGTGCCTAAGTAGCAATGACATCTCTTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000378244.6 ENST00000416321.5 ENST00000550587.6 ENST00000551642.1 |
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| CDS-3UTR CAA 90 bp | ACTTCTATCGAAGAGGGCTTGGTGGCATGTTTCCAATATTTTCCCGGTATCTCTTTAGATATAGTTGTGTaGCTTCAAGTGCTTCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: TSIEEGLVACFQYFPGISLDIVV*LQVLLL Trigger: GAGCAGAAGCACTTGAAGCAACACAACTATATCTAA...AGAGATACCGGGAAAATATTGGAAACATGCCACCAAGCCCTCTTCGATAGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| CDS-3UTR CAA 90 bp | TACTCCAGTGGAAACCAGACCAGTTGTTCTGCCCGCACTTTTAATAATGATTTGAGACAAGAGATGTCATaGCTACTTAGGCACGTGTTT | + |
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Preference number: 5 (lower is better) Translates to: YSSGNQTSCSARTFNNDLRQEMS*LLRHVF Trigger: AAACACGTGCCTAAGTAGCAATGACATCTCTTGTCT...CAAATCATTATTAAAAGTGCGGGCAGAACAACTGGTCTGGTTTCCACTGGAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| CDS-3UTR CAA 90 bp | TATTTTCCCGGTATCTCTTCAGGTACCCTCTCAGGTCTTCCACTGGAAGTATACATTATCATACTGTTTTaGCAACTTGTAGGCATTGGG | + |
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Preference number: 5 (lower is better) Translates to: YFPGISSGTLSGLPLEVYIIILF*QLVGIG Trigger: CCCAATGCCTACAAGTTGCAAAAACAGTATGATAAT...GTATACTTCCAGTGGAAGACCTGAGAGGGTACCTGAAGAGATACCGGGAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| CDS-3UTR CAA 90 bp | CAAGAGCCAACTGGTGTAGATACTGAATTGTCCTTCCCTTCTGCTTTTCAAACTTGCTTTTCAAACTCCTaGTATGTCAAGGGTTGGCAA | + |
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Preference number: 5 (lower is better) Translates to: QEPTGVDTELSFPSAFQTCFSNS*YVKGWQ Trigger: TTGCCAACCCTTGACATACAAGGAGTTTGAAAAGCA...AGTTTGAAAAGCAGAAGGGAAGGACAATTCAGTATCTACACCAGTTGGCTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| CDS-3UTR CAA 90 bp | CTGCCCGCACTTTTAATAATGATTTGGCTTGCAAAACTGATTTGGCAAGAGTTTTCTATCGAAGAGGGCTaGGTGGCATGTTTCCAATAT | + |
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Preference number: 5 (lower is better) Translates to: LPALLIMIWLAKLIWQEFSIEEG*VACFQY Trigger: ATATTGGAAACATGCCACCAAGCCCTCTTCGATAGA...AAACTCTTGCCAAATCAGTTTTGCAAGCCAAATCATTATTAAAAGTGCGGGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| CDS-3UTR CAA 90 bp | AGCCGTCGTAATTCTTCTCTAATGTTCAGCAACAGCAATCTTAGATATAGTTGTCTTGAGTCCAGGAGTTaGAGGTTACAGTCAGTTAGG | + |
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Preference number: 5 (lower is better) Translates to: SRRNSSLMFSNSNLRYSCLESRS*RLQSVR Trigger: CCTAACTGACTGTAACCTCAAACTCCTGGACTCAAG...ACAACTATATCTAAGATTGCTGTTGCTGAACATTAGAGAAGAATTACGACGGCT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| CDS-3UTR CAA 90 bp | CTGGAGGCTCCAAAATATTGTCCAAGAATGGAAGGTGAATCAATTGAAGAAGACTTAGATATAGTTGTGTaGCTTCAAGTGCTTCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: LEAPKYCPRMEGESIEEDLDIVV*LQVLLL Trigger: GAGCAGAAGCACTTGAAGCAACACAACTATATCTAA...GTCTTCTTCAATTGATTCACCTTCCATTCTTGGACAATATTTTGGAGCCTCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299185.12 ENST00000549341.1 |
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| CDS-3UTR CAA 90 bp | TACTCCAAGCATTCAATTGCTGCATTAAGCCAGTTATCGATTTCAGGTAGACATCCTGTGCTAGAGGATTaGAAATCATTTCATATCCTG | + |
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Preference number: 5 (lower is better) Translates to: YSKHSIAALSQLSISGRHPVLED*KSFHIL Trigger: CAGGATATGAAATGATTTCAAATCCTCTAGCACAGG...ATGTCTACCTGAAATCGATAACTGGCTTAATGCAGCAATTGAATGCTTGGAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299185.12 |
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| CDS-3UTR CAA 90 bp | TCTGATGCCATTGCCATAAAAGTAAGTAGCCGTCGTAATTCTTCTCTAATGTTCTTAGATATAGTTGTGTaGCTTCAAGTGCTTCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: SDAIAIKVSSRRNSSLMFLDIVV*LQVLLL Trigger: GAGCAGAAGCACTTGAAGCAACACAACTATATCTAA...GAACATTAGAGAAGAATTACGACGGCTACTTACTTTTATGGCAATGGCATCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378244.6 ENST00000416321.5 |
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| CDS-3UTR CAA 90 bp | GCAGTGGCGGAAGCAATACTTACCTGTAAGGATTTCTTGAGGATTATTAGAGAAATTCTCAGCATCCTTTaGTCTTTTGCAACAATCGTA | + |
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Preference number: 5 (lower is better) Translates to: AVAEAILTCKDFLRIIREILSIL*SFATIV Trigger: TACGATTGTTGCAAAAGACAAAAGGATGCTGAGAAT...TTCTCTAATAATCCTCAAGAAATCCTTACAGGTAAGTATTGCTTCCGCCACTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378244.6 |
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| CDS-3UTR CAA 90 bp | CGTAATTCTTCTCTAATGTTCAGCAACAGCAATCTTAGATATAGTTGTGTTGCTAGACAAGAGATGTCATaGCTACTTAGGCACGTGTTT | + |
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Preference number: 5 (lower is better) Translates to: RNSSLMFSNSNLRYSCVARQEMS*LLRHVF Trigger: AAACACGTGCCTAAGTAGCAATGACATCTCTTGTCT...AGCAACACAACTATATCTAAGATTGCTGTTGCTGAACATTAGAGAAGAATTACG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378244.6 ENST00000416321.5 |
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| CDS-3UTR CAA 90 bp | TCTGATGCCATTGCCATAAAAGTAAGTAGCCGTCGTAATTCTTCTCTAATGTTCATTCTCAGCATCCTTTaGTCTTTTGCAACAATCGTA | + |
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Preference number: 5 (lower is better) Translates to: SDAIAIKVSSRRNSSLMFILSIL*SFATIV Trigger: TACGATTGTTGCAAAAGACAAAAGGATGCTGAGAAT...GAACATTAGAGAAGAATTACGACGGCTACTTACTTTTATGGCAATGGCATCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378244.6 ENST00000416321.5 |
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| CDS-3UTR CAA 90 bp | AGCCGTCGTAATTCTTCTCTAATGTTCAGCAACAGCAATCTTAGATATAGTTGTATTTTTCACCTGTTTTaGCAACTTGTAGGCATTGGG | + |
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Preference number: 5 (lower is better) Translates to: SRRNSSLMFSNSNLRYSCIFHLF*QLVGIG Trigger: CCCAATGCCTACAAGTTGCAAAAACAGGTGAAAAAT...ACAACTATATCTAAGATTGCTGTTGCTGAACATTAGAGAAGAATTACGACGGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000416321.5 |
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| CDS-3UTR CAA 90 bp | TGCTATGACATCAAAGAGTATCTTCTTCTGACTGTTCAATCTTGTCTCTTCATTTTAGATATAGTTGTGTaGCTTCAAGTGCTTCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: CYDIKEYLLLTVQSCLFILDIVV*LQVLLL Trigger: GAGCAGAAGCACTTGAAGCAACACAACTATATCTAA...AATGAAGAGACAAGATTGAACAGTCAGAAGAAGATACTCTTTGATGTCATAGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299185.12 |
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| CDS CCA 72 bp | TCCTCCTTTTCCGGCAGAAGCCATCTCTACGGTTCCTaGAACTTGGCCCGTTCAGCCCTGGGCCCGGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: SSFSGRSHLYGS*NLARSALGPEA Trigger: AGCTTCCGGGCCCAGGGCTGAACGGGCCAAGTTCCAGGAACCGTAGAGATGGCTTCTGCCGGAAAAGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000299185.12 ENST00000378244.6 ENST00000416321.5 ENST00000549249.5 ENST00000549341.1 ENST00000550587.6 ENST00000551642.1 |
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| CDS TCA 72 bp | GCCCGTTCAGCCCTGGGCCCGGAAGCTCGTTCTGACTaGCAAGTCTACGGAACCTCGGAGTCAAAAGAACCG | + |
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Preference number: 6 (lower is better) Translates to: ARSALGPEARSD*QVYGTSESKEP Trigger: CGGTTCTTTTGACTCCGAGGTTCCGTAGACTTGTCAGTCAGAACGAGCTTCCGGGCCCAGGGCTGAACGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000299185.12 ENST00000378244.6 ENST00000416321.5 ENST00000549249.5 ENST00000549341.1 ENST00000550587.6 ENST00000551642.1 |
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| CDS CAA 72 bp | TTTTCCGGCAGAAGCCATCTCTACGGTTCCTGGAACTaGGCCCGTTCAGCCCTGGGCCCGGAAGCTCGTTCT | + |
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Preference number: 6 (lower is better) Translates to: FSGRSHLYGSWN*ARSALGPEARS Trigger: AGAACGAGCTTCCGGGCCCAGGGCTGAACGGGCCAAGTTCCAGGAACCGTAGAGATGGCTTCTGCCGGAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000299185.12 ENST00000378244.6 ENST00000416321.5 ENST00000549249.5 ENST00000549341.1 ENST00000550587.6 ENST00000551642.1 |
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| CDS TCA 72 bp | CTTGGCCCGTTCAGCCCTGGGCCCGGAAGCTCGTTCTaGCTGACAAGTCTACGGAACCTCGGAGTCAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: LGPFSPGPGSSF*LTSLRNLGVKR Trigger: TCTTTTGACTCCGAGGTTCCGTAGACTTGTCAGTCAGAACGAGCTTCCGGGCCCAGGGCTGAACGGGCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000299185.12 ENST00000378244.6 ENST00000416321.5 ENST00000549249.5 ENST00000549341.1 ENST00000550587.6 ENST00000551642.1 |
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| CDS CCA 72 bp | ATCTCTACGGTTCCTGGAACTTGGCCCGTTCAGCCCTaGGCCCGGAAGCTCGTTCTGACTGACAAGTCTACG | + |
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Preference number: 6 (lower is better) Translates to: ISTVPGTWPVQP*ARKLVLTDKST Trigger: CGTAGACTTGTCAGTCAGAACGAGCTTCCGGGCCCAGGGCTGAACGGGCCAAGTTCCAGGAACCGTAGAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000299185.12 ENST00000378244.6 ENST00000416321.5 ENST00000549249.5 ENST00000549341.1 ENST00000550587.6 ENST00000551642.1 |
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| CDS CCA 72 bp | CCCTTCTGCTTTTCAAACTCCTTGTATGTCAAGGGTTaGCAAAACGTAAAGCCTGATATGGCATCTGCATCT | + |
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Preference number: 6 (lower is better) Translates to: PFCFSNSLYVKG*QNVKPDMASAS Trigger: AGATGCAGATGCCATATCAGGCTTTACGTTTTGCCAACCCTTGACATACAAGGAGTTTGAAAAGCAGAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547823.1 |
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| CDS TCA 72 bp | GATGACTTAAGACCACATCGACAGCATCAGAACCAGTaGAACAGTCTTTGTATGTCTGTAAATGATGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: DDLRPHRQHQNQ*NSLCMSVNDAS Trigger: GGAGGCATCATTTACAGACATACAAAGACTGTTTCACTGGTTCTGATGCTGTCGATGTGGTCTTAAGTCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000378244.6 ENST00000416321.5 ENST00000550587.6 ENST00000551642.1 |
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| CDS TCA 72 bp | ATGTCATTGCTACTTAGGCACGTGTTTTGCATAAGATaGCTTAAGACCACATCGACAGCATCAGAACCAGTG | + |
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Preference number: 6 (lower is better) Translates to: MSLLLRHVFCIR*LKTTSTASEPV Trigger: CACTGGTTCTGATGCTGTCGATGTGGTCTTAAGTCATCTTATGCAAAACACGTGCCTAAGTAGCAATGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000378244.6 ENST00000416321.5 ENST00000550587.6 ENST00000551642.1 |
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| CDS TCA 72 bp | GAAACTCCTTCTTTTGAAAGCCGGAGAAAAGGTTTCTaGACTGTGATATTTGGACATAAAGCTGGATTCCCA | + |
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Preference number: 6 (lower is better) Translates to: ETPSFESRRKGF*TVIFGHKAGFP Trigger: TGGGAATCCAGCTTTATGTCCAAATATCACAGTTCAGAAACCTTTTCTCCGGCTTTCAAAAGAAGGAGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000548313.5 ENST00000549249.5 |
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| CDS CAA 72 bp | CAATTCTTTCCTCACCAATCTCCTGTGCTAGAGGATTaGAAATCATTTCATATCCTGGTCTGTCCTCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: QFFPHQSPVLED*KSFHILVCPPF Trigger: AAAAGGAGGACAGACCAGGATATGAAATGATTTCAAATCCTCTAGCACAGGAGATTGGTGAGGAAAGAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299185.12 ENST00000549341.1 |
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| CDS CAA 72 bp | CAATTCTTTCCTCACCAATCTCCTGTGCTAGAGGATTaGAAATCATTTCATATCCTGGTCTCAAGGTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: QFFPHQSPVLED*KSFHILVSRFH Trigger: ATGAAACCTTGAGACCAGGATATGAAATGATTTCAAATCCTCTAGCACAGGAGATTGGTGAGGAAAGAATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000378244.6 ENST00000416321.5 ENST00000549249.5 ENST00000550587.6 ENST00000551642.1 |
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| CDS CAA 72 bp | AGCAGACGCAACAACATGGTAATATCCTTAAAGCATTaGTCAAAGTATCCACCATTCATAGTGATGACTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRRNNMVISLKH*SKYPPFIVMTS Trigger: GCTAGTCATCACTATGAATGGTGGATACTTTGACAAATGCTTTAAGGATATTACCATGTTGTTGCGTCTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549100.5 |
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| CDS CAA 90 bp | TTTCTGAACAGCAGACGCAACAACATGGTAATATCCTTAAAGCATTaGTCAAAGTATCCACCATTCATAGTGATGACTAGCAAATCCCTA | + |
|
Preference number: 6 (lower is better) Translates to: FLNSRRNNMVISLKH*SKYPPFIVMTSKSL Trigger: TAGGGATTTGCTAGTCATCACTATGAATGGTGGATACTTTGACAAATGCTTTAAGGATATTACCATGTTGTTGCGTCTGCTGTTCAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549100.5 |
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| CDS TCA 72 bp | AGAAAGAGGAAAGAAAAGGAAGGAGCAGAGAAAGAATaGGAAGGAAAGAAGATAACCATAAAATATGGACTG | + |
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Preference number: 6 (lower is better) Translates to: RKRKEKEGAEKE*EGKKITIKYGL Trigger: CAGTCCATATTTTATGGTTATCTTCTTTCCTTCTCATTCTTTCTCTGCTCCTTCCTTTTCTTTCCTCTTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550587.6 |
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