RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DENND6B (Homo sapiens)

Ensembl gene IDs: ENSG00000205593

Ensembl transcript IDs: ENST00000413817.8, ENST00000433760.1, ENST00000460087.1, ENST00000471942.6, ENST00000495607.5

Found 353 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCCAAGGAAGGGGAGCGTGTGCTTGGCCCAGTGCCGCCACCACTaGGGAGTGGGAGGCTCAGGCAGACCTAGGGCCCTGGGACCGTGG +
Preference number: 1 (lower is better)
Translates to: GPRKGSVCLAQCRHH*GVGGSGRPRALGPW
Trigger: CCACGGTCCCAGGGCCCTAGGTCTGCCTGAGCCTCCCACTCCCCAGTGGTGGCGGCACTGGGCCAAGCACACGCTCCCCTTCCTTGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CCA 90 bp CCAGAAGGGACGCACGGAGCTGGTGCCTGGTGGGGGCTCCAGGACTaGGAGCCAGGAAGGTGCTGTGGCTCTCCGAGAGCCAGGCTGAGC +
Preference number: 1 (lower is better)
Translates to: PEGTHGAGAWWGLQD*EPGRCCGSPRARLS
Trigger: GCTCAGCCTGGCTCTCGGAGAGCCACAGCACCTTCCTGGCTCCCAGTCCTGGAGCCCCCACCAGGCACCAGCTCCGTGCGTCCCTTCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR TCA 90 bp GGCCAGCACCCGCCCGGCCTCACAGGGTACAAAGCCCAGTCTCCATaGGTGGCCCTCCCAGCACCCTGTCGGGCATCTGCATGGCTGGCT +
Preference number: 1 (lower is better)
Translates to: GQHPPGLTGYKAQSP*VALPAPCRASAWLA
Trigger: AGCCAGCCATGCAGATGCCCGACAGGGTGCTGGGAGGGCCACTCATGGAGACTGGGCTTTGTACCCTGTGAGGCCGGGCGGGTGCTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CCA 90 bp GGGGACCTGCTCCCGGGCACACAGTGCGTGATGCTGAGCAGGGCTTaGCTGTCCGGAGCCCTGACAGTACCGTCACTGTGTGCTGTGCAG +
Preference number: 1 (lower is better)
Translates to: GDLLPGTQCVMLSRA*LSGALTVPSLCAVQ
Trigger: CTGCACAGCACACAGTGACGGTACTGTCAGGGCTCCGGACAGCCAAGCCCTGCTCAGCATCACGCACTGTGTGCCCGGGAGCAGGTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR GCA 90 bp TCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTaGATGTGGGGGATGGACGGACACACTTGGACAACAGGAGCCCTG +
Preference number: 1 (lower is better)
Translates to: SSQRQGQAEVQSPLG*MWGMDGHTWTTGAL
Trigger: CAGGGCTCCTGTTGTCCAAGTGTGTCCGTCCATCCCCCACATGCAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR GCA 90 bp GAGCAGGGCTTGGCTGTCCGGAGCCCTGACAGTACCGTCACTGTGTaGTGTGCAGGGTCAACACCGTACCTCACCGGCCTCAGTGCCTGC +
Preference number: 1 (lower is better)
Translates to: EQGLAVRSPDSTVTV*CAGSTPYLTGLSAC
Trigger: GCAGGCACTGAGGCCGGTGAGGTACGGTGTTGACCCTGCACAGCACACAGTGACGGTACTGTCAGGGCTCCGGACAGCCAAGCCCTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR TCA 90 bp GGACACCTGACCCCGCTGTCCTTGTGGCTCAGTCACATCCTGCACTaGAGTGGCTGGCAGTGCTCGCTCTCCACCACCTGGCTGGAGGTC +
Preference number: 1 (lower is better)
Translates to: GHLTPLSLWLSHILH*SGWQCSLSTTWLEV
Trigger: GACCTCCAGCCAGGTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTGAGCCACAAGGACAGCGGGGTCAGGTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR TCA 90 bp GGTCTGCAGCCCTCTGTGCTGTGCGGCAGCCCTCAGAAAGCCAAGTaGGGCGAGACTGTGCTGTGGGGAAGCACATGCTGCCACGGTCCT +
Preference number: 1 (lower is better)
Translates to: GLQPSVLCGSPQKAK*GETVLWGSTCCHGP
Trigger: AGGACCGTGGCAGCATGTGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACAGCACAGAGGGCTGCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CCA 90 bp AGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGCATGTGGGGGATaGACGGACACACTTGGACAACAGGAGCCCTGTCCACCTCCCAGA +
Preference number: 1 (lower is better)
Translates to: RVRPKSRAPWAACGG*TDTLGQQEPCPPPR
Trigger: TCTGGGAGGTGGACAGGGCTCCTGTTGTCCAAGTGTGTCCGTCCATCCCCCACATGCAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CCA 90 bp CCCCTTGGTCACCCTCCCGGCTGCCTCCGCGTCTTGTCTGTAGAATaGGAACAGGGACAGGCTGTCCTGGGCTGCAGTTGGGCTGGACAA +
Preference number: 1 (lower is better)
Translates to: PLGHPPGCLRVLSVE*EQGQAVLGCSWAGQ
Trigger: TTGTCCAGCCCAACTGCAGCCCAGGACAGCCTGTCCCTGTTCCCATTCTACAGACAAGACGCGGAGGCAGCCGGGAGGGTGACCAAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR GCA 90 bp CCAGACATCTGGGGCTTAACAGCTCCCCTTGGTCACCCTCCCGGCTaGCTCCGCGTCTTGTCTGTAGAATGGGAACAGGGACAGGCTGTC +
Preference number: 1 (lower is better)
Translates to: PDIWGLTAPLGHPPG*LRVLSVEWEQGQAV
Trigger: GACAGCCTGTCCCTGTTCCCATTCTACAGACAAGACGCGGAGGCAGCCGGGAGGGTGACCAAGGGGAGCTGTTAAGCCCCAGATGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR GCA 90 bp GGAGGTCAGCATTCAAGCTGCCCACACAAGAGGTGCCAGCATCTCTaGAGACCCTCTAGAGACCAAGCCCTCAGTGGGGAGGCTGGTCCC +
Preference number: 1 (lower is better)
Translates to: GGQHSSCPHKRCQHL*RPSRDQALSGEAGP
Trigger: GGGACCAGCCTCCCCACTGAGGGCTTGGTCTCTAGAGGGTCTGCAGAGATGCTGGCACCTCTTGTGTGGGCAGCTTGAATGCTGACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR GCA 90 bp CGCCACTATGTGGCCTCACCAGAGCCCTCCAGGGAAATCTGCTTGTaGATTTCTGGATACACAGTGGCCAGGGTCCCTGGGGGCTCCTCA +
Preference number: 1 (lower is better)
Translates to: RHYVASPEPSREICL*ISGYTVARVPGGSS
Trigger: TGAGGAGCCCCCAGGGACCCTGGCCACTGTGTATCCAGAAATGCACAAGCAGATTTCCCTGGAGGGCTCTGGTGAGGCCACATAGTGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CCA 90 bp ATCCTTGGACCCTGCACCAGACATCTGGGGCTTAACAGCTCCCCTTaGTCACCCTCCCGGCTGCCTCCGCGTCTTGTCTGTAGAATGGGA +
Preference number: 1 (lower is better)
Translates to: ILGPCTRHLGLNSSP*SPSRLPPRLVCRMG
Trigger: TCCCATTCTACAGACAAGACGCGGAGGCAGCCGGGAGGGTGACCAAGGGGAGCTGTTAAGCCCCAGATGTCTGGTGCAGGGTCCAAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CCA 90 bp GTTCTGTTTCATGTGGTCACATCCTTGGACCCTGCACCAGACATCTaGGGCTTAACAGCTCCCCTTGGTCACCCTCCCGGCTGCCTCCGC +
Preference number: 1 (lower is better)
Translates to: VLFHVVTSLDPAPDI*GLTAPLGHPPGCLR
Trigger: GCGGAGGCAGCCGGGAGGGTGACCAAGGGGAGCTGTTAAGCCCCAGATGTCTGGTGCAGGGTCCAAGGATGTGACCACATGAAACAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR TCA 90 bp TCCTGGGCTGCAGTTGGGCTGGACAAGTTGACATGTACCAAGTTCTaGGAACTACCTGGCGCCCGGACACCTGACCCCGCTGTCCTTGTG +
Preference number: 1 (lower is better)
Translates to: SWAAVGLDKLTCTKF*ELPGARTPDPAVLV
Trigger: CACAAGGACAGCGGGGTCAGGTGTCCGGGCGCCAGGTAGTTCTCAGAACTTGGTACATGTCAACTTGTCCAGCCCAACTGCAGCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR TCA 90 bp GGAACAGGGACAGGCTGTCCTGGGCTGCAGTTGGGCTGGACAAGTTaGCATGTACCAAGTTCTGAGAACTACCTGGCGCCCGGACACCTG +
Preference number: 1 (lower is better)
Translates to: GTGTGCPGLQLGWTS*HVPSSENYLAPGHL
Trigger: CAGGTGTCCGGGCGCCAGGTAGTTCTCAGAACTTGGTACATGTCAACTTGTCCAGCCCAACTGCAGCCCAGGACAGCCTGTCCCTGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR GCA 90 bp TTTGGGGCCAGGACCTTTCTCACCCTCGGGTCCCCGGCTTGTCCCTaGCACAGAACAGGTTTGCCACCTCGGCCTCTATGTGTTCTGTTT +
Preference number: 1 (lower is better)
Translates to: FGARTFLTLGSPACP*HRTGLPPRPLCVLF
Trigger: AAACAGAACACATAGAGGCCGAGGTGGCAAACCTGTTCTGTGGCAGGGACAAGCCGGGGACCCGAGGGTGAGAAAGGTCCTGGCCCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR GCA 90 bp TTCACACGCCACTATGTGGCCTCACCAGAGCCCTCCAGGGAAATCTaGTTGTGCATTTCTGGATACACAGTGGCCAGGGTCCCTGGGGGC +
Preference number: 1 (lower is better)
Translates to: FTRHYVASPEPSREI*LCISGYTVARVPGG
Trigger: GCCCCCAGGGACCCTGGCCACTGTGTATCCAGAAATGCACAAGCAGATTTCCCTGGAGGGCTCTGGTGAGGCCACATAGTGGCGTGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CCA 90 bp TCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACCTGGCTaGAGGTCTGAGAGCACCAATGAGAACACAAACAGTACGTTGCGC +
Preference number: 1 (lower is better)
Translates to: SCTEVAGSARSPPPG*RSESTNENTNSTLR
Trigger: GCGCAACGTACTGTTTGTGTTCTCATTGGTGCTCTCAGACCTCCAGCCAGGTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR TCA 90 bp GTTGACATGTACCAAGTTCTGAGAACTACCTGGCGCCCGGACACCTaGCCCCGCTGTCCTTGTGGCTCAGTCACATCCTGCACTGAAGTG +
Preference number: 1 (lower is better)
Translates to: VDMYQVLRTTWRPDT*PRCPCGSVTSCTEV
Trigger: CACTTCAGTGCAGGATGTGACTGAGCCACAAGGACAGCGGGGTCAGGTGTCCGGGCGCCAGGTAGTTCTCAGAACTTGGTACATGTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR TCA 90 bp AGTTGTGAGAGAGGTGGGTTGTCTTCCCAAGCTGCCCCGACACCTTaGAGTGGTGGTCCTCAGGGGGCTGGTCACCAGCATAAGGCTTTT +
Preference number: 1 (lower is better)
Translates to: SCERGGLSSQAAPTP*SGGPQGAGHQHKAF
Trigger: AAAAGCCTTATGCTGGTGACCAGCCCCCTGAGGACCACCACTTCAAGGTGTCGGGGCAGCTTGGGAAGACAACCCACCTCTCTCACAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR GCA 90 bp TTCTCACCCTCGGGTCCCCGGCTTGTCCCTGCCACAGAACAGGTTTaGCACCTCGGCCTCTATGTGTTCTGTTTCATGTGGTCACATCCT +
Preference number: 1 (lower is better)
Translates to: FSPSGPRLVPATEQV*HLGLYVFCFMWSHP
Trigger: AGGATGTGACCACATGAAACAGAACACATAGAGGCCGAGGTGGCAAACCTGTTCTGTGGCAGGGACAAGCCGGGGACCCGAGGGTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR GCA 90 bp TCGGCCTCTATGTGTTCTGTTTCATGTGGTCACATCCTTGGACCCTaGACCAGACATCTGGGGCTTAACAGCTCCCCTTGGTCACCCTCC +
Preference number: 1 (lower is better)
Translates to: SASMCSVSCGHILGP*TRHLGLNSSPWSPS
Trigger: GGAGGGTGACCAAGGGGAGCTGTTAAGCCCCAGATGTCTGGTGCAGGGTCCAAGGATGTGACCACATGAAACAGAACACATAGAGGCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR GCA 90 bp CGCGTCTTGTCTGTAGAATGGGAACAGGGACAGGCTGTCCTGGGCTaGAGTTGGGCTGGACAAGTTGACATGTACCAAGTTCTGAGAACT +
Preference number: 1 (lower is better)
Translates to: RVLSVEWEQGQAVLG*SWAGQVDMYQVLRT
Trigger: AGTTCTCAGAACTTGGTACATGTCAACTTGTCCAGCCCAACTGCAGCCCAGGACAGCCTGTCCCTGTTCCCATTCTACAGACAAGACGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CCA 90 bp TTGTCTGTAGAATGGGAACAGGGACAGGCTGTCCTGGGCTGCAGTTaGGCTGGACAAGTTGACATGTACCAAGTTCTGAGAACTACCTGG +
Preference number: 1 (lower is better)
Translates to: LSVEWEQGQAVLGCS*AGQVDMYQVLRTTW
Trigger: CCAGGTAGTTCTCAGAACTTGGTACATGTCAACTTGTCCAGCCCAACTGCAGCCCAGGACAGCCTGTCCCTGTTCCCATTCTACAGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR TCA 90 bp TGGAGGTCTGAGAGCACCAATGAGAACACAAACAGTACGTTGCGCTaGATGAAGGCTACATTCCTCGGACTGAATGGGGGCCTCAGAAGA +
Preference number: 1 (lower is better)
Translates to: WRSESTNENTNSTLR*MKATFLGLNGGLRR
Trigger: TCTTCTGAGGCCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAGCGCAACGTACTGTTTGTGTTCTCATTGGTGCTCTCAGACCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR GCA 90 bp GGTGTCCAGAGGAGCACCAGGGGTGGTGAGCAGAGCTCTTCACACTaGAAAGTGGTCTCTCCCTTTCTCAAGTTGATGACTATATGCAAA +
Preference number: 1 (lower is better)
Translates to: GVQRSTRGGEQSSSH*KVVSPFLKLMTICK
Trigger: TTTGCATATAGTCATCAACTTGAGAAAGGGAGAGACCACTTTGCAGTGTGAAGAGCTCTGCTCACCACCCCTGGTGCTCCTCTGGACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR GCA 90 bp TGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGGACGCACGGAGCTGGTaGCTGGTGGGGGCTCCAGGA +
Preference number: 2 (lower is better)
Translates to: CRLQPEAGSGRSPEPLGLDARSW*LVGAPG
Trigger: TCCTGGAGCCCCCACCAGGCACCAGCTCCGTGCGTC...CAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR TCA 90 bp TGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGCTCCGAGAGCCAGGCTaGGCCAGCTCTCCTAGCAGA +
Preference number: 2 (lower is better)
Translates to: CRLQPEAGSGRSPEPLGLLREPG*ASSPSR
Trigger: TCTGCTAGGAGAGCTGGCTCAGCCTGGCTCTCGGAG...CAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR CCA 90 bp AGGCCAGGTGGGACCCAGGAGGAGGCAAGGCTCTGCCTGCGAGGAACCCCTATGAGGGGAGCGTGTGCTTaGCCCAGTGCCGCCACCACT +
Preference number: 2 (lower is better)
Translates to: RPGGTQEEARLCLRGTPMRGACA*PSAATT
Trigger: AGTGGTGGCGGCACTGGGCCAAGCACACGCTCCCCT...CATAGGGGTTCCTCGCAGGCAGAGCCTTGCCTCCTCCTGGGTCCCACCTGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR GCA 90 bp GGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGCATGTGGGGGATGGACGGACACTGGGAGCCAGGAAGGTaGTGTGGCTCTCCGAGAGCC +
Preference number: 2 (lower is better)
Translates to: GQAEVQSPLGCMWGMDGHWEPGR*CGSPRA
Trigger: GGCTCTCGGAGAGCCACAGCACCTTCCTGGCTCCCA...GTGTCCGTCCATCCCCCACATGCAGCCCAAGGGGCTCTGGACTTCGGCCTGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CAA 90 bp GCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTaGGGCTGCATGTGGGGGATGGACGGACACACTTGGACAACAGGA +
Preference number: 2 (lower is better)
Translates to: AGSSQRQGQAEVQSP*GCMWGMDGHTWTTG
Trigger: TCCTGTTGTCCAAGTGTGTCCGTCCATCCCCCACATGCAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CAA 90 bp AGGGGACCTGCTCCCGGGCACACAGTGCGTGATGCTGAGCAGGGCTaGGCTGTCCGGAGCCCTGACAGTACCGTCACTGTGTGCTGTGCA +
Preference number: 2 (lower is better)
Translates to: RGPAPGHTVRDAEQG*AVRSPDSTVTVCCA
Trigger: TGCACAGCACACAGTGACGGTACTGTCAGGGCTCCGGACAGCCAAGCCCTGCTCAGCATCACGCACTGTGTGCCCGGGAGCAGGTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CAA 90 bp AGCAGTCCTCACCCTCGCCAACTAAGTTCTGCCCAGCAAGCCCTCTaGCCTGCGGGGGCTGGCACTCTGGCCAGGGGTAGAGCTGTCTGG +
Preference number: 2 (lower is better)
Translates to: SSPHPRQLSSAQQAL*PAGAGTLARGRAVW
Trigger: CCAGACAGCTCTACCCCTGGCCAGAGTGCCAGCCCCCGCAGGCAAGAGGGCTTGCTGGGCAGAACTTAGTTGGCGAGGGTGAGGACTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR GCA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTTCCCAGCCTAAGGTCTaGAGAGGCCAGGTGGGACCC +
Preference number: 2 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLSQPKV*RGQVGP
Trigger: GGGTCCCACCTGGCCTCTGCAGACCTTAGGCTGGGA...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR CCA 90 bp GTGGCTCAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACTCGGGGGCCAACAGATaGGCACCGGGAGGGGCAGAC +
Preference number: 2 (lower is better)
Translates to: VAQSHPALKWLAVLALHHSGANR*APGGAD
Trigger: GTCTGCCCCTCCCGGTGCCCATCTGTTGGCCCCCGA...GTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTGAGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR TCA 90 bp CAGTCAGGAGGCCCAAGCTGCATTTGGGGCCAGGACCTTTCTCACCCTCGGGTCAAAGCCCAGTCTCCATaGGTGGCCCTCCCAGCACCC +
Preference number: 2 (lower is better)
Translates to: QSGGPSCIWGQDLSHPRVKAQSP*VALPAP
Trigger: GGGTGCTGGGAGGGCCACTCATGGAGACTGGGCTTT...GACCCGAGGGTGAGAAAGGTCCTGGCCCCAAATGCAGCTTGGGCCTCCTGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR GCA 90 bp AAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCACATGCTGCCACGGTCCTTCCTCACCGGCCTCAGTaGCTGCAGGTGTCACGGGGG +
Preference number: 2 (lower is better)
Translates to: KPSEARLCCGEAHAATVLPHRPQ*LQVSRG
Trigger: CCCCCGTGACACCTGCAGGCACTGAGGCCGGTGAGG...AAGGACCGTGGCAGCATGTGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR CCA 90 bp CTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGCATGTGCTGCTGAGACAATGGTaGTGCAGGAAGGGGAGCCTG +
Preference number: 2 (lower is better)
Translates to: LQPEAGSGRSPEPLGLHVLLRQW*CRKGSL
Trigger: CAGGCTCCCCTTCCTGCACCACCATTGTCTCAGCAG...CACATGCAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR CCA 90 bp GCCCTCTGTGCTGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTGCCAGGAAGGTGCTGTaGCTCTCCGAGAGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: ALCAVRQPSESQVRRDCAARKVL*LSESQA
Trigger: AGCCTGGCTCTCGGAGAGCCACAGCACCTTCCTGGC...AGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACAGCACAGAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CAA 90 bp GGCTTAACAGCTCCCCTTGGTCACCCTCCCGGCTGCCTCCGCGTCTaGTCTGTAGAATGGGAACAGGGACAGGCTGTCCTGGGCTGCAGT +
Preference number: 2 (lower is better)
Translates to: GLTAPLGHPPGCLRV*SVEWEQGQAVLGCS
Trigger: ACTGCAGCCCAGGACAGCCTGTCCCTGTTCCCATTCTACAGACAAGACGCGGAGGCAGCCGGGAGGGTGACCAAGGGGAGCTGTTAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR TCA 90 bp TGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGTGTCGCCTTTACTGCTaGGACAATGGTGGTGCAGGA +
Preference number: 2 (lower is better)
Translates to: CRLQPEAGSGRSPEPLGLCRLYC*DNGGAG
Trigger: TCCTGCACCACCATTGTCTCAGCAGTAAAGGCGACA...CAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR GCA 90 bp GTGGCTCAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACCTCCCGGGCACACAGTaGGTGATGCTGAGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: VAQSHPALKWLAVLALHHLPGTQ*VMLSRA
Trigger: AGCCCTGCTCAGCATCACGCACTGTGTGCCCGGGAG...GTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTGAGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR CCA 90 bp AAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCACATGCTGCCACGGTCCTTGCAGACCTAGGGCCCTaGGACCGTGGCCCTTGGCTT +
Preference number: 2 (lower is better)
Translates to: KPSEARLCCGEAHAATVLADLGP*DRGPWL
Trigger: AAGCCAAGGGCCACGGTCCCAGGGCCCTAGGTCTGC...AAGGACCGTGGCAGCATGTGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR CCA 90 bp GTGGCTCAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACGCCACCACTGGGGAGTaGGAGGCTCAGGCAGACCTA +
Preference number: 2 (lower is better)
Translates to: VAQSHPALKWLAVLALHHATTGE*EAQADL
Trigger: TAGGTCTGCCTGAGCCTCCCACTCCCCAGTGGTGGC...GTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTGAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR CCA 90 bp TGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCATCTGCAGAGGCCAGGTaGGACCCAGGAGGAGGCAAG +
Preference number: 2 (lower is better)
Translates to: CAAALRKPSEARLCCGEASAEAR*DPGGGK
Trigger: CTTGCCTCCTCCTGGGTCCCACCTGGCCTCTGCAGA...TGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR CCA 90 bp CAGTCAGGAGGCCCAAGCTGCATTTGGGGCCAGGACCTTTCTCACCCTCGGGTCCCCTTGGGCTGCATGTaGGGGATGGACGGACACACT +
Preference number: 2 (lower is better)
Translates to: QSGGPSCIWGQDLSHPRVPLGCM*GMDGHT
Trigger: AGTGTGTCCGTCCATCCCCCACATGCAGCCCAAGGG...GACCCGAGGGTGAGAAAGGTCCTGGCCCCAAATGCAGCTTGGGCCTCCTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CAA 90 bp AGCTGCATTTGGGGCCAGGACCTTTCTCACCCTCGGGTCCCCGGCTaGTCCCTGCCACAGAACAGGTTTGCCACCTCGGCCTCTATGTGT +
Preference number: 2 (lower is better)
Translates to: SCIWGQDLSHPRVPG*SLPQNRFATSASMC
Trigger: ACACATAGAGGCCGAGGTGGCAAACCTGTTCTGTGGCAGGGACAAGCCGGGGACCCGAGGGTGAGAAAGGTCCTGGCCCCAAATGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CAA 90 bp ACACGCCACTATGTGGCCTCACCAGAGCCCTCCAGGGAAATCTGCTaGTGCATTTCTGGATACACAGTGGCCAGGGTCCCTGGGGGCTCC +
Preference number: 2 (lower is better)
Translates to: TRHYVASPEPSREIC*CISGYTVARVPGGS
Trigger: GGAGCCCCCAGGGACCCTGGCCACTGTGTATCCAGAAATGCACAAGCAGATTTCCCTGGAGGGCTCTGGTGAGGCCACATAGTGGCGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR GCA 90 bp TGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCACAGGCTGTCCTGGGCTaGAGTTGGGCTGGACAAGTT +
Preference number: 2 (lower is better)
Translates to: CAAALRKPSEARLCCGEAQAVLG*SWAGQV
Trigger: AACTTGTCCAGCCCAACTGCAGCCCAGGACAGCCTG...TGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR GCA 90 bp AATCTGCTTGTGCATTTCTGGATACACAGTGGCCAGGGTCCCTGGGGGCTCCTCGCAGCCATGTGGGTCTaGAGCCCTCTGTGCTGTGCG +
Preference number: 2 (lower is better)
Translates to: NLLVHFWIHSGQGPWGLLAAMWV*SPLCCA
Trigger: CGCACAGCACAGAGGGCTGCAGACCCACATGGCTGC...GAGGAGCCCCCAGGGACCCTGGCCACTGTGTATCCAGAAATGCACAAGCAGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR TCA 90 bp CAGGGACAGGCTGTCCTGGGCTGCAGTTGGGCTGGACAAGTTGACATGTACCAAGGCAGCCTGTTGGGCTaGGGGAAGCATCACACACAG +
Preference number: 2 (lower is better)
Translates to: QGQAVLGCSWAGQVDMYQGSLLG*GKHHTQ
Trigger: CTGTGTGTGATGCTTCCCTCAGCCCAACAGGCTGCC...TTGGTACATGTCAACTTGTCCAGCCCAACTGCAGCCCAGGACAGCCTGTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR TCA 90 bp CAGTCAGGAGGCCCAAGCTGCATTTGGGGCCAGGACCTTTCTCACCCTCGGGTCGTACGTTGCGCTGAATaGAGGCTACATTCCTCGGAC +
Preference number: 2 (lower is better)
Translates to: QSGGPSCIWGQDLSHPRVVRCAE*RLHSSD
Trigger: GTCCGAGGAATGTAGCCTTCATTCAGCGCAACGTAC...GACCCGAGGGTGAGAAAGGTCCTGGCCCCAAATGCAGCTTGGGCCTCCTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR GCA 90 bp TGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCAGGCTCAGTCACATCCTaGACTGAAGTGGCTGGCAGT +
Preference number: 2 (lower is better)
Translates to: CAAALRKPSEARLCCGEAGSVTS*TEVAGS
Trigger: ACTGCCAGCCACTTCAGTGCAGGATGTGACTGAGCC...TGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR CCA 90 bp CACAAACAGTACGTTGCGCTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGCAGTGCCGCCACCACTaGGGAGTGGGAGGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: HKQYVALNEGYIPRTEWGQCRHH*GVGGSG
Trigger: GCCTGAGCCTCCCACTCCCCAGTGGTGGCGGCACTG...CCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAGCGCAACGTACTGTTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR CCA 90 bp GTACCAAGTTCTGAGAACTACCTGGCGCCCGGACACCTGACCCCGCTGTCCTTGATGGACGGACACACTTaGACAACAGGAGCCCTGTCC +
Preference number: 2 (lower is better)
Translates to: VPSSENYLAPGHLTPLSLMDGHT*TTGALS
Trigger: GGACAGGGCTCCTGTTGTCCAAGTGTGTCCGTCCAT...CAAGGACAGCGGGGTCAGGTGTCCGGGCGCCAGGTAGTTCTCAGAACTTGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR CCA 90 bp GCCCTCTGTGCTGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTATTAACCAAGCGCAGTaGTGGGTGCCTGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: ALCAVRQPSESQVRRDCAINQAQ*WVPVVP
Trigger: TGGGACTACAGGCACCCACCACTGCGCTTGGTTAAT...AGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACAGCACAGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR GCA 90 bp CACAAACAGTACGTTGCGCTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGAGGAAGGGGAGCGTGTaGTTGGCCCAGTGCCGCCAC +
Preference number: 2 (lower is better)
Translates to: HKQYVALNEGYIPRTEWGRKGSV*LAQCRH
Trigger: GTGGCGGCACTGGGCCAAGCACACGCTCCCCTTCCT...CCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAGCGCAACGTACTGTTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR GCA 90 bp AAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCACATGCTGCCACGGTCCTTCGTCACTGTGTGCTGTaGAGGGTCAACACCGTACCT +
Preference number: 2 (lower is better)
Translates to: KPSEARLCCGEAHAATVLRHCVL*RVNTVP
Trigger: AGGTACGGTGTTGACCCTGCACAGCACACAGTGACG...AAGGACCGTGGCAGCATGTGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR CCA 90 bp CAGGGACAGGCTGTCCTGGGCTGCAGTTGGGCTGGACAAGTTGACATGTACCAAGGGCATCTGCATGGCTaGCTCGCTCAGATGAGGAGT +
Preference number: 2 (lower is better)
Translates to: QGQAVLGCSWAGQVDMYQGHLHG*LAQMRS
Trigger: ACTCCTCATCTGAGCGAGCCAGCCATGCAGATGCCC...TTGGTACATGTCAACTTGTCCAGCCCAACTGCAGCCCAGGACAGCCTGTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR CCA 90 bp AATCTGCTTGTGCATTTCTGGATACACAGTGGCCAGGGTCCCTGGGGGCTCCTCACCCCGCTGTCCTTGTaGCTCAGTCACATCCTGCAC +
Preference number: 2 (lower is better)
Translates to: NLLVHFWIHSGQGPWGLLTPLSL*LSHILH
Trigger: GTGCAGGATGTGACTGAGCCACAAGGACAGCGGGGT...GAGGAGCCCCCAGGGACCCTGGCCACTGTGTATCCAGAAATGCACAAGCAGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CAA 90 bp TTTCTCACCCTCGGGTCCCCGGCTTGTCCCTGCCACAGAACAGGTTaGCCACCTCGGCCTCTATGTGTTCTGTTTCATGTGGTCACATCC +
Preference number: 2 (lower is better)
Translates to: FLTLGSPACPCHRTG*PPRPLCVLFHVVTS
Trigger: GGATGTGACCACATGAAACAGAACACATAGAGGCCGAGGTGGCAAACCTGTTCTGTGGCAGGGACAAGCCGGGGACCCGAGGGTGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR TCA 90 bp AATCTGCTTGTGCATTTCTGGATACACAGTGGCCAGGGTCCCTGGGGGCTCCTCACATGTACCAAGTTCTaGGAACTACCTGGCGCCCGG +
Preference number: 2 (lower is better)
Translates to: NLLVHFWIHSGQGPWGLLTCTKF*ELPGAR
Trigger: CCGGGCGCCAGGTAGTTCTCAGAACTTGGTACATGT...GAGGAGCCCCCAGGGACCCTGGCCACTGTGTATCCAGAAATGCACAAGCAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR CCA 90 bp AATCTGCTTGTGCATTTCTGGATACACAGTGGCCAGGGTCCCTGGGGGCTCCTCGTGCGCTCCCCAAAGTaGGGTCACAGTTGTGAGAGA +
Preference number: 2 (lower is better)
Translates to: NLLVHFWIHSGQGPWGLLVRSPK*GHSCER
Trigger: TCTCTCACAACTGTGACCCCACTTTGGGGAGCGCAC...GAGGAGCCCCCAGGGACCCTGGCCACTGTGTATCCAGAAATGCACAAGCAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR TCA 90 bp CAGGGACAGGCTGTCCTGGGCTGCAGTTGGGCTGGACAAGTTGACATGTACCAACTACATTCCTCGGACTaGATGGGGGCCTCAGAAGAA +
Preference number: 2 (lower is better)
Translates to: QGQAVLGCSWAGQVDMYQLHSSD*MGASEE
Trigger: TTCTTCTGAGGCCCCCATTCAGTCCGAGGAATGTAG...TTGGTACATGTCAACTTGTCCAGCCCAACTGCAGCCCAGGACAGCCTGTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR TCA 90 bp GTGGCTCAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACAACAGTACGTTGCGCTaGATGAAGGCTACATTCCTC +
Preference number: 2 (lower is better)
Translates to: VAQSHPALKWLAVLALHHNSTLR*MKATFL
Trigger: GAGGAATGTAGCCTTCATTCAGCGCAACGTACTGTT...GTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTGAGCCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR GCA 90 bp CACAAACAGTACGTTGCGCTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGCCGGGAGGCAGAGCTTaGAGTGAGCCGAGATCATGC +
Preference number: 2 (lower is better)
Translates to: HKQYVALNEGYIPRTEWGPGGRA*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAAGCTCTGCCTCCCGG...CCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAGCGCAACGTACTGTTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR CCA 90 bp CACAAACAGTACGTTGCGCTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGACAGCCCCAAGCAGGTaGGTGTCCAGAGGAGCACCA +
Preference number: 2 (lower is better)
Translates to: HKQYVALNEGYIPRTEWGTAPSR*VSRGAP
Trigger: TGGTGCTCCTCTGGACACCCACCTGCTTGGGGCTGT...CCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAGCGCAACGTACTGTTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CAA 90 bp TTGCCACCTCGGCCTCTATGTGTTCTGTTTCATGTGGTCACATCCTaGGACCCTGCACCAGACATCTGGGGCTTAACAGCTCCCCTTGGT +
Preference number: 2 (lower is better)
Translates to: LPPRPLCVLFHVVTS*DPAPDIWGLTAPLG
Trigger: ACCAAGGGGAGCTGTTAAGCCCCAGATGTCTGGTGCAGGGTCCAAGGATGTGACCACATGAAACAGAACACATAGAGGCCGAGGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR CCA 90 bp CACAAACAGTACGTTGCGCTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGAACCAAGCGCAGTGGTaGGTGCCTGTAGTCCCAGCT +
Preference number: 2 (lower is better)
Translates to: HKQYVALNEGYIPRTEWGNQAQW*VPVVPA
Trigger: AGCTGGGACTACAGGCACCCACCACTGCGCTTGGTT...CCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAGCGCAACGTACTGTTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR GCA 90 bp GCCCTCTGTGCTGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTAAGTTGATGACTATATaGAAAATAGCCTCCCATCCC +
Preference number: 2 (lower is better)
Translates to: ALCAVRQPSESQVRRDCAKLMTI*KIASHP
Trigger: GGGATGGGAGGCTATTTTGCATATAGTCATCAACTT...AGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACAGCACAGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR GCA 90 bp CAGGGACAGGCTGTCCTGGGCTGCAGTTGGGCTGGACAAGTTGACATGTACCAACAGAGCTCTTCACACTaGAAAGTGGTCTCTCCCTTT +
Preference number: 2 (lower is better)
Translates to: QGQAVLGCSWAGQVDMYQQSSSH*KVVSPF
Trigger: AAAGGGAGAGACCACTTTGCAGTGTGAAGAGCTCTG...TTGGTACATGTCAACTTGTCCAGCCCAACTGCAGCCCAGGACAGCCTGTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR CCA 90 bp CAGGGACAGGCTGTCCTGGGCTGCAGTTGGGCTGGACAAGTTGACATGTACCAAATTCCTCGGACTGAATaGGGGCCTCAGAAGAAAAAG +
Preference number: 2 (lower is better)
Translates to: QGQAVLGCSWAGQVDMYQIPRTE*GPQKKK
Trigger: CTTTTTCTTCTGAGGCCCCCATTCAGTCCGAGGAAT...TTGGTACATGTCAACTTGTCCAGCCCAACTGCAGCCCAGGACAGCCTGTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR CCA 90 bp CTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGCCTCAGAAGAAAAAGAAAATGCTGAGCAGGGCTTaGCTGTCCGGAGCCCTGACA +
Preference number: 2 (lower is better)
Translates to: LNEGYIPRTEWGPQKKKKMLSRA*LSGALT
Trigger: TGTCAGGGCTCCGGACAGCCAAGCCCTGCTCAGCAT...TTTCTTTTTCTTCTGAGGCCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR CCA 90 bp CTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGCCTCAGAAGAAAAAGAAAGCTGCATGTGGGGGATaGACGGACACACTTGGACAA +
Preference number: 2 (lower is better)
Translates to: LNEGYIPRTEWGPQKKKKAACGG*TDTLGQ
Trigger: TTGTCCAAGTGTGTCCGTCCATCCCCCACATGCAGC...TTTCTTTTTCTTCTGAGGCCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CCA 72 bp AAGGGGAGCGTGTGCTTGGCCCAGTGCCGCCACCACTaGGGAGTGGGAGGCTCAGGCAGACCTAGGGCCCTG +
Preference number: 3 (lower is better)
Translates to: KGSVCLAQCRHH*GVGGSGRPRAL
Trigger: CAGGGCCCTAGGTCTGCCTGAGCCTCCCACTCCCCAGTGGTGGCGGCACTGGGCCAAGCACACGCTCCCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CCA 72 bp ACGCACGGAGCTGGTGCCTGGTGGGGGCTCCAGGACTaGGAGCCAGGAAGGTGCTGTGGCTCTCCGAGAGCC +
Preference number: 3 (lower is better)
Translates to: THGAGAWWGLQD*EPGRCCGSPRA
Trigger: GGCTCTCGGAGAGCCACAGCACCTTCCTGGCTCCCAGTCCTGGAGCCCCCACCAGGCACCAGCTCCGTGCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR GCA 72 bp GTAGAGCTGTCTGGACCTTCCTGCCTCTTCACTGACTaGCCCTGGCCTGGAGTGCGTGGGGCGGGGAGGGCC +
Preference number: 3 (lower is better)
Translates to: VELSGPSCLFTD*PWPGVRGAGRA
Trigger: GGCCCTCCCCGCCCCACGCACTCCAGGCCAGGGGCAGTCAGTGAAGAGGCAGGAAGGTCCAGACAGCTCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CCA 72 bp CCCAGCAAGCCCTCTTGCCTGCGGGGGCTGGCACTCTaGCCAGGGGTAGAGCTGTCTGGACCTTCCTGCCTC +
Preference number: 3 (lower is better)
Translates to: PSKPSCLRGLAL*PGVELSGPSCL
Trigger: GAGGCAGGAAGGTCCAGACAGCTCTACCCCTGGCCAGAGTGCCAGCCCCCGCAGGCAAGAGGGCTTGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR CAA 90 bp GCCCTCTGTGCTGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTCCTCGGGTCCCCGGCTaGTCCCTGCCACAGAACAGG +
Preference number: 3 (lower is better)
Translates to: ALCAVRQPSESQVRRDCAPRVPG*SLPQNR
Trigger: CCTGTTCTGTGGCAGGGACAAGCCGGGGACCCGAGG...AGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACAGCACAGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR GCA 72 bp CAGAGGCCAGGTGGGACCCAGGAGGAGGCAAGGCTCTaGCTGCGAGGAACCCCTATGGTCAAGGCCATGCTG +
Preference number: 3 (lower is better)
Translates to: QRPGGTQEEARL*LRGTPMVKAML
Trigger: CAGCATGGCCTTGACCATAGGGGTTCCTCGCAGGCAGAGCCTTGCCTCCTCCTGGGTCCCACCTGGCCTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CCA 72 bp CCGGCCTCACAGGGTACAAAGCCCAGTCTCCATGAGTaGCCCTCCCAGCACCCTGTCGGGCATCTGCATGGC +
Preference number: 3 (lower is better)
Translates to: PASQGTKPSLHE*PSQHPVGHLHG
Trigger: GCCATGCAGATGCCCGACAGGGTGCTGGGAGGGCCACTCATGGAGACTGGGCTTTGTACCCTGTGAGGCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR TCA 72 bp CATGGCTGGCTCGCTCAGATGAGGAGTCTGAGGGTCTaGGTGGTCAGGGGACCTGCTCCCGGGCACACAGTG +
Preference number: 3 (lower is better)
Translates to: HGWLAQMRSLRV*VVRGPAPGHTV
Trigger: CACTGTGTGCCCGGGAGCAGGTCCCCTGACCACTCAGACCCTCAGACTCCTCATCTGAGCGAGCCAGCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR GCA 72 bp GCTGGTCCCCCTGTGCTACAGTCAGGAGGCCCAAGCTaGATTTGGGGCCAGGACCTTTCTCACCCTCGGGTC +
Preference number: 3 (lower is better)
Translates to: AGPPVLQSGGPS*IWGQDLSHPRV
Trigger: GACCCGAGGGTGAGAAAGGTCCTGGCCCCAAATGCAGCTTGGGCCTCCTGACTGTAGCACAGGGGGACCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CCA 72 bp CTCCCGGGCACACAGTGCGTGATGCTGAGCAGGGCTTaGCTGTCCGGAGCCCTGACAGTACCGTCACTGTGT +
Preference number: 3 (lower is better)
Translates to: LPGTQCVMLSRA*LSGALTVPSLC
Trigger: ACACAGTGACGGTACTGTCAGGGCTCCGGACAGCCAAGCCCTGCTCAGCATCACGCACTGTGTGCCCGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CCA 72 bp CACCCTCCCGGCTGCCTCCGCGTCTTGTCTGTAGAATaGGAACAGGGACAGGCTGTCCTGGGCTGCAGTTGG +
Preference number: 3 (lower is better)
Translates to: HPPGCLRVLSVE*EQGQAVLGCSW
Trigger: CCAACTGCAGCCCAGGACAGCCTGTCCCTGTTCCCATTCTACAGACAAGACGCGGAGGCAGCCGGGAGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CCA 72 bp CCCTGCACCAGACATCTGGGGCTTAACAGCTCCCCTTaGTCACCCTCCCGGCTGCCTCCGCGTCTTGTCTGT +
Preference number: 3 (lower is better)
Translates to: PCTRHLGLNSSP*SPSRLPPRLVC
Trigger: ACAGACAAGACGCGGAGGCAGCCGGGAGGGTGACCAAGGGGAGCTGTTAAGCCCCAGATGTCTGGTGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR TCA 72 bp ACCCCGCTGTCCTTGTGGCTCAGTCACATCCTGCACTaGAGTGGCTGGCAGTGCTCGCTCTCCACCACCTGG +
Preference number: 3 (lower is better)
Translates to: TPLSLWLSHILH*SGWQCSLSTTW
Trigger: CCAGGTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTGAGCCACAAGGACAGCGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR TCA 72 bp CCCTCTGTGCTGTGCGGCAGCCCTCAGAAAGCCAAGTaGGGCGAGACTGTGCTGTGGGGAAGCACATGCTGC +
Preference number: 3 (lower is better)
Translates to: PSVLCGSPQKAK*GETVLWGSTCC
Trigger: GCAGCATGTGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACAGCACAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR GCA 72 bp AGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTaGATGTGGGGGATGGACGGACACACTTGGACAACA +
Preference number: 3 (lower is better)
Translates to: RQGQAEVQSPLG*MWGMDGHTWTT
Trigger: TGTTGTCCAAGTGTGTCCGTCCATCCCCCACATGCAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR GCA 72 bp TTGGCTGTCCGGAGCCCTGACAGTACCGTCACTGTGTaGTGTGCAGGGTCAACACCGTACCTCACCGGCCTC +
Preference number: 3 (lower is better)
Translates to: LAVRSPDSTVTV*CAGSTPYLTGL
Trigger: GAGGCCGGTGAGGTACGGTGTTGACCCTGCACAGCACACAGTGACGGTACTGTCAGGGCTCCGGACAGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR TCA 72 bp AGAGGTGGGTTGTCTTCCCAAGCTGCCCCGACACCTTaGAGTGGTGGTCCTCAGGGGGCTGGTCACCAGCAT +
Preference number: 3 (lower is better)
Translates to: RGGLSSQAAPTP*SGGPQGAGHQH
Trigger: ATGCTGGTGACCAGCCCCCTGAGGACCACCACTTCAAGGTGTCGGGGCAGCTTGGGAAGACAACCCACCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CCA 72 bp CATGTGGTCACATCCTTGGACCCTGCACCAGACATCTaGGGCTTAACAGCTCCCCTTGGTCACCCTCCCGGC +
Preference number: 3 (lower is better)
Translates to: HVVTSLDPAPDI*GLTAPLGHPPG
Trigger: GCCGGGAGGGTGACCAAGGGGAGCTGTTAAGCCCCAGATGTCTGGTGCAGGGTCCAAGGATGTGACCACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR CAA 90 bp GTGGCTCAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACGATGGACGGACACACTaGGACAACAGGAGCCCTGTC +
Preference number: 3 (lower is better)
Translates to: VAQSHPALKWLAVLALHHDGRTH*DNRSPV
Trigger: GACAGGGCTCCTGTTGTCCAAGTGTGTCCGTCCATC...GTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTGAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR TCA 72 bp CAAGCAGGTGGGTGTCCAGAGGAGCACCAGGGGTGGTaGGCAGAGCTCTTCACACTGCAAAGTGGTCTCTCC +
Preference number: 3 (lower is better)
Translates to: QAGGCPEEHQGW*AELFTLQSGLS
Trigger: GGAGAGACCACTTTGCAGTGTGAAGAGCTCTGCTCACCACCCCTGGTGCTCCTCTGGACACCCACCTGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR TCA 72 bp TACCAAGTTCTGAGAACTACCTGGCGCCCGGACACCTaGCCCCGCTGTCCTTGTGGCTCAGTCACATCCTGC +
Preference number: 3 (lower is better)
Translates to: YQVLRTTWRPDT*PRCPCGSVTSC
Trigger: GCAGGATGTGACTGAGCCACAAGGACAGCGGGGTCAGGTGTCCGGGCGCCAGGTAGTTCTCAGAACTTGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR GCA 72 bp CCCCAGGCCCCATCTTATGGAGGTCAGCATTCAAGCTaGCCACACAAGAGGTGCCAGCATCTCTGCAGACCC +
Preference number: 3 (lower is better)
Translates to: PQAPSYGGQHSS*PHKRCQHLCRP
Trigger: GGGTCTGCAGAGATGCTGGCACCTCTTGTGTGGGCAGCTTGAATGCTGACCTCCATAAGATGGGGCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR TCA 72 bp GCAGTTGGGCTGGACAAGTTGACATGTACCAAGTTCTaGGAACTACCTGGCGCCCGGACACCTGACCCCGCT +
Preference number: 3 (lower is better)
Translates to: AVGLDKLTCTKF*ELPGARTPDPA
Trigger: AGCGGGGTCAGGTGTCCGGGCGCCAGGTAGTTCTCAGAACTTGGTACATGTCAACTTGTCCAGCCCAACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR TCA 72 bp TCTAGGTTCTGTGGTCCCTGTCCTTCGGGAGGCCTGTaGCCACAGCAGTCCTCACCCTCGCCAACTAAGTTC +
Preference number: 3 (lower is better)
Translates to: SRFCGPCPSGGL*PQQSSPSPTKF
Trigger: GAACTTAGTTGGCGAGGGTGAGGACTGCTGTGGTCACAGGCCTCCCGAAGGACAGGGACCACAGAACCTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR GCA 72 bp TCGGGTCCCCGGCTTGTCCCTGCCACAGAACAGGTTTaGCACCTCGGCCTCTATGTGTTCTGTTTCATGTGG +
Preference number: 3 (lower is better)
Translates to: SGPRLVPATEQV*HLGLYVFCFMW
Trigger: CCACATGAAACAGAACACATAGAGGCCGAGGTGGCAAACCTGTTCTGTGGCAGGGACAAGCCGGGGACCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR GCA 72 bp CATTCAAGCTGCCCACACAAGAGGTGCCAGCATCTCTaGAGACCCTCTAGAGACCAAGCCCTCAGTGGGGAG +
Preference number: 3 (lower is better)
Translates to: HSSCPHKRCQHL*RPSRDQALSGE
Trigger: CTCCCCACTGAGGGCTTGGTCTCTAGAGGGTCTGCAGAGATGCTGGCACCTCTTGTGTGGGCAGCTTGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR TCA 72 bp ACAGGCTGTCCTGGGCTGCAGTTGGGCTGGACAAGTTaGCATGTACCAAGTTCTGAGAACTACCTGGCGCCC +
Preference number: 3 (lower is better)
Translates to: TGCPGLQLGWTS*HVPSSENYLAP
Trigger: GGGCGCCAGGTAGTTCTCAGAACTTGGTACATGTCAACTTGTCCAGCCCAACTGCAGCCCAGGACAGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR-3UTR CAA 90 bp CTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGCCTCAGAAGAAAAAGAAAAAGGGGAGCGTGTGCTaGGCCCAGTGCCGCCACCAC +
Preference number: 3 (lower is better)
Translates to: LNEGYIPRTEWGPQKKKKKGSVC*AQCRHH
Trigger: GTGGTGGCGGCACTGGGCCAAGCACACGCTCCCCTT...TTTCTTTTTCTTCTGAGGCCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR GCA 72 bp CACTATGTGGCCTCACCAGAGCCCTCCAGGGAAATCTaGTTGTGCATTTCTGGATACACAGTGGCCAGGGTC +
Preference number: 3 (lower is better)
Translates to: HYVASPEPSREI*LCISGYTVARV
Trigger: GACCCTGGCCACTGTGTATCCAGAAATGCACAAGCAGATTTCCCTGGAGGGCTCTGGTGAGGCCACATAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CCA 72 bp GAATGGGAACAGGGACAGGCTGTCCTGGGCTGCAGTTaGGCTGGACAAGTTGACATGTACCAAGTTCTGAGA +
Preference number: 3 (lower is better)
Translates to: EWEQGQAVLGCS*AGQVDMYQVLR
Trigger: TCTCAGAACTTGGTACATGTCAACTTGTCCAGCCCAACTGCAGCCCAGGACAGCCTGTCCCTGTTCCCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR TCA 72 bp GAGAGCACCAATGAGAACACAAACAGTACGTTGCGCTaGATGAAGGCTACATTCCTCGGACTGAATGGGGGC +
Preference number: 3 (lower is better)
Translates to: ESTNENTNSTLR*MKATFLGLNGG
Trigger: GCCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAGCGCAACGTACTGTTTGTGTTCTCATTGGTGCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp TGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGGGGCGGGGAGGGCCATaGCCTAGCCCTGGACAGAGG +
Preference number: 4 (lower is better)
Translates to: CRLQPEAGSGRSPEPLGLGRGGP*PSPGQR
Trigger: CCTCTGTCCAGGGCTAGGCCATGGCCCTCCCCGCCC...CAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp TGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGTGCCCAGGGCAATGCTaGCCACCCAGCCCGGTTCCC +
Preference number: 4 (lower is better)
Translates to: CRLQPEAGSGRSPEPLGLCPGQC*PPSPVP
Trigger: GGGAACCGGGCTGGGTGGCCAGCATTGCCCTGGGCA...CAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp CTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGCATGTGAGTCGCAGCAGAACCTaGGGGGCTGCAGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LQPEAGSGRSPEPLGLHVSRSRT*GAAGSW
Trigger: CCAGCTGCCTGCAGCCCCTCAGGTTCTGCTGCGACT...CACATGCAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp GGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGCATGTGGGGGATGGACGGACACGCTGCCCCGACACCTTaGAGTGGTGGTCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: GQAEVQSPLGCMWGMDGHAAPTP*SGGPQG
Trigger: CCCCTGAGGACCACCACTTCAAGGTGTCGGGGCAGC...GTGTCCGTCCATCCCCCACATGCAGCCCAAGGGGCTCTGGACTTCGGCCTGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp GGGCACACAGTGCGTGATGCTGAGCAGGGCTTGGCTGTCCGGAGCCCTGACAGTTGTGCCGGCTCCCTCTaGAGTGCCACAGGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GHTVRDAEQGLAVRSPDSCAGSL*SATGAL
Trigger: CAGGGCCCCTGTGGCACTGCAGAGGGAGCCGGCACA...ACTGTCAGGGCTCCGGACAGCCAAGCCCTGCTCAGCATCACGCACTGTGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTCCTCACCGGCCTCAGTaGCTGCAGGTGTCACGGGGG +
Preference number: 4 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLPHRPQ*LQVSRG
Trigger: CCCCCGTGACACCTGCAGGCACTGAGGCCGGTGAGG...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp TGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCACCAACAGCGCGTCCATaGCGGCGGCCGCGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: CAAALRKPSEARLCCGEAPTARP*RRPRVA
Trigger: GGCAACCCGCGGCCGCCGCCATGGACGCGCTGTTGG...TGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp TGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGTCTGCAGAGGCCAGGTaGGACCCAGGAGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: CRLQPEAGSGRSPEPLGLSAEAR*DPGGGK
Trigger: CTTGCCTCCTCCTGGGTCCCACCTGGCCTCTGCAGA...CAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTTCGGGGGCCAACAGATaGGCACCGGGAGGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLSGANR*APGGAD
Trigger: GTCTGCCCCTCCCGGTGCCCATCTGTTGGCCCCCGA...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp TGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGTGCTGCCACGGTCCTTaGGGTGCGCTCCCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: CRLQPEAGSGRSPEPLGLCCHGP*GALPKV
Trigger: CACTTTGGGGAGCGCACCCCAAGGACCGTGGCAGCA...CAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GTGGCTCAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACCTGGCCTGGAGTGCGTaGGGCGGGGAGGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: VAQSHPALKWLAVLALHHLAWSA*GGEGHG
Trigger: GCCATGGCCCTCCCCGCCCCACGCACTCCAGGCCAG...GTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTGAGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CAA 72 bp TGGGGCCAGGACCTTTCTCACCCTCGGGTCCCCGGCTaGTCCCTGCCACAGAACAGGTTTGCCACCTCGGCC +
Preference number: 4 (lower is better)
Translates to: WGQDLSHPRVPG*SLPQNRFATSA
Trigger: GGCCGAGGTGGCAAACCTGTTCTGTGGCAGGGACAAGCCGGGGACCCGAGGGTGAGAAAGGTCCTGGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp GTGGCTCAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACTGGCGCCCGGACACCTaGCCCCGCTGTCCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: VAQSHPALKWLAVLALHHWRPDT*PRCPCG
Trigger: GCCACAAGGACAGCGGGGTCAGGTGTCCGGGCGCCA...GTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTGAGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp TGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCACCCGGCGAGGCCCTGTaGCCAACAGCGCGTCCATGG +
Preference number: 4 (lower is better)
Translates to: CAAALRKPSEARLCCGEAPGEAL*PTARPW
Trigger: CCATGGACGCGCTGTTGGGCACAGGGCCTCGCCGGG...TGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTCGGCTCCCTCTGCAGTaGCACAGGGGCCCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLRLPLQ*HRGPAV
Trigger: AACAGCAGGGCCCCTGTGGCACTGCAGAGGGAGCCG...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp GTACCAAGTTCTGAGAACTACCTGGCGCCCGGACACCTGACCCCGCTGTCCTTGCAGGGTCTGCCCAGGTaGAGGCGCCGGCCACTGGTC +
Preference number: 4 (lower is better)
Translates to: VPSSENYLAPGHLTPLSLQGLPR*RRRPLV
Trigger: GACCAGTGGCCGGCGCCTGCACCTGGGCAGACCCTG...CAAGGACAGCGGGGTCAGGTGTCCGGGCGCCAGGTAGTTCTCAGAACTTGGTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTCGCAGCAGGGCGCTCTaGACATCTGACGGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLRSRAL*TSDGRF
Trigger: GAAGCGGCCGTCAGATGTGCAGAGCGCCCTGCTGCG...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp TGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCAGTGAGCTCCAGGAGGTaGCGCCGCAGCAGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: CAAALRKPSEARLCCGEAVSSRR*RRSRAL
Trigger: GAGCGCCCTGCTGCGGCGGCACCTCCTGGAGCTCAC...TGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp CTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGCATGTGTCCCAGCCTAAGGTCTaGAGAGGCCAGGTGGGACCC +
Preference number: 4 (lower is better)
Translates to: LQPEAGSGRSPEPLGLHVSQPKV*RGQVGP
Trigger: GGGTCCCACCTGGCCTCTGCAGACCTTAGGCTGGGA...CACATGCAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp CTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGCATGTGTGGGGAAGCACATGCTaGCACGGTCCTTGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: LQPEAGSGRSPEPLGLHVWGSTC*HGPWGA
Trigger: CGCACCCCAAGGACCGTGGCAGCATGTGCTTCCCCA...CACATGCAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp CTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGCATGTGGTCTGCAGCCCTCTGTaGTGTGCGGCAGCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LQPEAGSGRSPEPLGLHVVCSPL*CAAALR
Trigger: TCTGAGGGCTGCCGCACAGCACAGAGGGCTGCAGAC...CACATGCAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp TGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGTGCCTCTTCACTGACTaGCCCTGGCCTGGAGTGCGT +
Preference number: 4 (lower is better)
Translates to: CRLQPEAGSGRSPEPLGLCLFTD*PWPGVR
Trigger: ACGCACTCCAGGCCAGGGGCAGTCAGTGAAGAGGCA...CAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp GTACCAAGTTCTGAGAACTACCTGGCGCCCGGACACCTGACCCCGCTGTCCTTGAGCAGGCCCCCTGTGTaGACCCTCAGCCCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: VPSSENYLAPGHLTPLSLSRPPV*TLSPEP
Trigger: GGGCTCGGGGCTGAGGGTGCACACAGGGGGCCTGCT...CAAGGACAGCGGGGTCAGGTGTCCGGGCGCCAGGTAGTTCTCAGAACTTGGTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp AGGCCAGGTGGGACCCAGGAGGAGGCAAGGCTCTGCCTGCGAGGAACCCCTATGCAGGACCACGTTTGGTaGGGCCTGCGTGCGTGTGGT +
Preference number: 4 (lower is better)
Translates to: RPGGTQEEARLCLRGTPMQDHVW*GLRACG
Trigger: ACCACACGCACGCAGGCCCCACCAAACGTGGTCCTG...CATAGGGGTTCCTCGCAGGCAGAGCCTTGCCTCCTCCTGGGTCCCACCTGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp CTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGCATGTGAGGATGCAGGTGAGCTaGGGCCCAGCATGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LQPEAGSGRSPEPLGLHVRMQVS*GPACSR
Trigger: CCTGGAGCATGCTGGGCCCCAGCTCACCTGCATCCT...CACATGCAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTCCGGACAGATGGAGCTaGCAGGTCTCCACGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLPDRWS*QVSTPS
Trigger: GCTGGGCGTGGAGACCTGCCAGCTCCATCTGTCCGG...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTCGGGGGCTGGCACTCTaGCCAGGGGTAGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLRGLAL*PGVELS
Trigger: AGACAGCTCTACCCCTGGCCAGAGTGCCAGCCCCCG...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CAA 72 bp CACCCTCGCCAACTAAGTTCTGCCCAGCAAGCCCTCTaGCCTGCGGGGGCTGGCACTCTGGCCAGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: HPRQLSSAQQAL*PAGAGTLARGR
Trigger: TCTACCCCTGGCCAGAGTGCCAGCCCCCGCAGGCAAGAGGGCTTGCTGGGCAGAACTTAGTTGGCGAGGGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTCAGGCCGGAAGCACCTaGACAGGTCCAGCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLQAGST*TGPARG
Trigger: TCCACGAGCTGGACCTGTTCAGGTGCTTCCGGCCTG...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp CTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGCATGTGTGGGCAGGGAGCCGATaGCCGTCTCGATGTACAGCT +
Preference number: 4 (lower is better)
Translates to: LQPEAGSGRSPEPLGLHVWAGSR*PSRCTA
Trigger: AGCTGTACATCGAGACGGTCATCGGCTCCCTGCCCA...CACATGCAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTCAGAACCTGAGGGGCTaGAGGCAGCTGGTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLQNLRG*RQLVKA
Trigger: GGCCTTGACCAGCTGCCTGCAGCCCCTCAGGTTCTG...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp GCCCTCTGTGCTGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTAGGAAGGGGAGCGTGTaGTTGGCCCAGTGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: ALCAVRQPSESQVRRDCARKGSV*LAQCRH
Trigger: GTGGCGGCACTGGGCCAAGCACACGCTCCCCTTCCT...AGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACAGCACAGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp CTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGCATGTGGAGGAGGCAAGGCTCTaGCTGCGAGGAACCCCTATG +
Preference number: 4 (lower is better)
Translates to: LQPEAGSGRSPEPLGLHVEEARL*LRGTPM
Trigger: CATAGGGGTTCCTCGCAGGCAGAGCCTTGCCTCCTC...CACATGCAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp GGGCACACAGTGCGTGATGCTGAGCAGGGCTTGGCTGTCCGGAGCCCTGACAGTCAGAGCCCCTTGGGCTaGATGTGGGGGATGGACGGA +
Preference number: 4 (lower is better)
Translates to: GHTVRDAEQGLAVRSPDSQSPLG*MWGMDG
Trigger: TCCGTCCATCCCCCACATGCAGCCCAAGGGGCTCTG...ACTGTCAGGGCTCCGGACAGCCAAGCCCTGCTCAGCATCACGCACTGTGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp AGGCCAGGTGGGACCCAGGAGGAGGCAAGGCTCTGCCTGCGAGGAACCCCTATGGGTCTCCTGACATCTTaGGCTCCCCGACTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: RPGGTQEEARLCLRGTPMGLLTS*APRLGG
Trigger: TCCTCCGAGTCGGGGAGCCCAAGATGTCAGGAGACC...CATAGGGGTTCCTCGCAGGCAGAGCCTTGCCTCCTCCTGGGTCCCACCTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp CTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGCATGTGTGGGACCGTGGCCCTTaGCTTTGTTCTAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LQPEAGSGRSPEPLGLHVWDRGP*LCSREG
Trigger: GCCCTCCCTAGAACAAAGCCAAGGGCCACGGTCCCA...CACATGCAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTCCTCAGTGGGGAGGCTaGTCCCCCTGTGCTACAGTC +
Preference number: 4 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLPQWGG*SPCATV
Trigger: GACTGTAGCACAGGGGGACCAGCCTCCCCACTGAGG...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CAA 72 bp CCCCTTGGGCTGCATGTGGGGGATGGACGGACACACTaGGACAACAGGAGCCCTGTCCACCTCCCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: PLGLHVGDGRTH*DNRSPVHLPEG
Trigger: CCCTTCTGGGAGGTGGACAGGGCTCCTGTTGTCCAAGTGTGTCCGTCCATCCCCCACATGCAGCCCAAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CAA 72 bp GCTCCCCTTGGTCACCCTCCCGGCTGCCTCCGCGTCTaGTCTGTAGAATGGGAACAGGGACAGGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: APLGHPPGCLRV*SVEWEQGQAVL
Trigger: CAGGACAGCCTGTCCCTGTTCCCATTCTACAGACAAGACGCGGAGGCAGCCGGGAGGGTGACCAAGGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGCGCATGCGGAAGCTaGACTGAGTGTCTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLGACGS*TECLQG
Trigger: GCCTTGGAGACACTCAGTTCAGCTTCCGCATGCGCC...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp GTACCAAGTTCTGAGAACTACCTGGCGCCCGGACACCTGACCCCGCTGTCCTTGCTGGTGGAGGGCAGCTaGTGGCAGGGCCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: VPSSENYLAPGHLTPLSLLVEGS*WQGLYW
Trigger: CCAGTACAGGCCCTGCCATCAGCTGCCCTCCACCAG...CAAGGACAGCGGGGTCAGGTGTCCGGGCGCCAGGTAGTTCTCAGAACTTGGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp AAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCACATGCTGCCACGGTCCTTGGTGGGGACAGGCCCTaGGGAAGAGGGGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: KPSEARLCCGEAHAATVLGGDRP*GRGAGT
Trigger: TGTCCCAGCCCCTCTTCCTCAGGGCCTGTCCCCACC...AAGGACCGTGGCAGCATGTGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp CAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACCTGGCTCCTTCGGGAGGCCTGTaGCCACAGCAGTCCTCACCC +
Preference number: 4 (lower is better)
Translates to: QSHPALKWLAVLALHHLAPSGGL*PQQSSP
Trigger: GGGTGAGGACTGCTGTGGTCACAGGCCTCCCGAAGG...AGCCAGGTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp CAGTCAGGAGGCCCAAGCTGCATTTGGGGCCAGGACCTTTCTCACCCTCGGGTCTGTCCTTCCTGTCCCTaGGCAGGCCCCCTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: QSGGPSCIWGQDLSHPRVCPSCP*AGPLCA
Trigger: TGCACACAGGGGGCCTGCTCAGGGACAGGAAGGACA...GACCCGAGGGTGAGAAAGGTCCTGGCCCCAAATGCAGCTTGGGCCTCCTGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp GCCCTCTGTGCTGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTGGCGTGATGCTCTTCTaGAGGGGCATGAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: ALCAVRQPSESQVRRDCAGVMLF*RGMRLA
Trigger: GGCCAGCCTCATGCCCCTGCAGAAGAGCATCACGCC...AGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACAGCACAGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTCTCGATGTACAGCTGTaGCCGCTGCAGCGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLLDVQL*PLQRSL
Trigger: GAGGCTACGCTGCAGCGGGCACAGCTGTACATCGAG...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCACAAGACAGCCTaGAGGTCTTTGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLGHKTA*RSLGRE
Trigger: CTCCCTGCCCAAAGACCTGCAGGCTGTCTTGTGCCC...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp TGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCAAGGGGAGCGTGTGCTTaGCCCAGTGCCGCCACCACT +
Preference number: 4 (lower is better)
Translates to: CAAALRKPSEARLCCGEARGACA*PSAATT
Trigger: AGTGGTGGCGGCACTGGGCCAAGCACACGCTCCCCT...TGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTACAGCCCCAAGCAGGTaGGTGTCCAGAGGAGCACCA +
Preference number: 4 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLTAPSR*VSRGAP
Trigger: TGGTGCTCCTCTGGACACCCACCTGCTTGGGGCTGT...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTCCCTTGGGCTGCATGTaGGGGATGGACGGACACACT +
Preference number: 4 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLPLGCM*GMDGHT
Trigger: AGTGTGTCCGTCCATCCCCCACATGCAGCCCAAGGG...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTATGCTGAGCAGGGCTTaGCTGTCCGGAGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLMLSRA*LSGALT
Trigger: TGTCAGGGCTCCGGACAGCCAAGCCCTGCTCAGCAT...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTCCTCTTCTGCACAGGTaGGGACAGGCCCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLPLLHR*GQALRK
Trigger: CTTCCTCAGGGCCTGTCCCCACCTGTGCAGAAGAGG...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTAGGCATCCGGACAGATaGAGCTGGCAGGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLRHPDR*SWQVST
Trigger: CGTGGAGACCTGCCAGCTCCATCTGTCCGGATGCCT...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp GCCCTCTGTGCTGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTAGTACTCGGGGGCGATaGGGCTTAGCAGCGCTTGGA +
Preference number: 4 (lower is better)
Translates to: ALCAVRQPSESQVRRDCASTRGR*GLAALG
Trigger: TCCAAGCGCTGCTAAGCCTCATCGCCCCCGAGTACT...AGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACAGCACAGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp GGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGCATGTGGGGGATGGACGGACACGGACAACAACGCCCATaGCAGGTAGGTTCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: GQAEVQSPLGCMWGMDGHGQQRP*QVGSGS
Trigger: AGACCCTGAACCTACCTGTCATGGGCGTTGTTGTCC...GTGTCCGTCCATCCCCCACATGCAGCCCAAGGGGCTCTGGACTTCGGCCTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp TGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCACTCCGAGAGCCAGGCTaGGCCAGCTCTCCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: CAAALRKPSEARLCCGEALREPG*ASSPSR
Trigger: TCTGCTAGGAGAGCTGGCTCAGCCTGGCTCTCGGAG...TGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp AGGCCAGGTGGGACCCAGGAGGAGGCAAGGCTCTGCCTGCGAGGAACCCCTATGACATGTACCAAGTTCTaGGAACTACCTGGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: RPGGTQEEARLCLRGTPMTCTKF*ELPGAR
Trigger: CCGGGCGCCAGGTAGTTCTCAGAACTTGGTACATGT...CATAGGGGTTCCTCGCAGGCAGAGCCTTGCCTCCTCCTGGGTCCCACCTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp TGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCATGGGAGCCAGGAAGGTaGTGTGGCTCTCCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: CAAALRKPSEARLCCGEAWEPGR*CGSPRA
Trigger: GGCTCTCGGAGAGCCACAGCACCTTCCTGGCTCCCA...TGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp AGGCCAGGTGGGACCCAGGAGGAGGCAAGGCTCTGCCTGCGAGGAACCCCTATGGTTGTCTTCCCAAGCTaGCCCGACACCTTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: RPGGTQEEARLCLRGTPMVVFPS*PDTLKW
Trigger: CCACTTCAAGGTGTCGGGGCAGCTTGGGAAGACAAC...CATAGGGGTTCCTCGCAGGCAGAGCCTTGCCTCCTCCTGGGTCCCACCTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp AGGCCAGGTGGGACCCAGGAGGAGGCAAGGCTCTGCCTGCGAGGAACCCCTATGCTTAGCCTTAGCTTCTaGCCAGGGCAATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RPGGTQEEARLCLRGTPMLSLSF*PGQCWP
Trigger: TGGCCAGCATTGCCCTGGGCAGAAGCTAAGGCTAAG...CATAGGGGTTCCTCGCAGGCAGAGCCTTGCCTCCTCCTGGGTCCCACCTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp CAGGGACAGGCTGTCCTGGGCTGCAGTTGGGCTGGACAAGTTGACATGTACCAACCCAGCAAGCCCTCTTaGCTGCGGGGGCTGGCACTC +
Preference number: 4 (lower is better)
Translates to: QGQAVLGCSWAGQVDMYQPSKPS*LRGLAL
Trigger: GAGTGCCAGCCCCCGCAGGCAAGAGGGCTTGCTGGG...TTGGTACATGTCAACTTGTCCAGCCCAACTGCAGCCCAGGACAGCCTGTCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp CAGTCAGGAGGCCCAAGCTGCATTTGGGGCCAGGACCTTTCTCACCCTCGGGTCCTCTGCCCTCCACACTaGCGCATGCGGAAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: QSGGPSCIWGQDLSHPRVLCPPH*RMRKLN
Trigger: GTTCAGCTTCCGCATGCGCCAGTGTGGAGGGCAGAG...GACCCGAGGGTGAGAAAGGTCCTGGCCCCAAATGCAGCTTGGGCCTCCTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GGGCACACAGTGCGTGATGCTGAGCAGGGCTTGGCTGTCCGGAGCCCTGACAGTAGGCTTAGCAGCGCTTaGAACAGCCGGACAAAGGGC +
Preference number: 4 (lower is better)
Translates to: GHTVRDAEQGLAVRSPDSRLSSA*NSRTKG
Trigger: GCCCTTTGTCCGGCTGTTCCAAGCGCTGCTAAGCCT...ACTGTCAGGGCTCCGGACAGCCAAGCCCTGCTCAGCATCACGCACTGTGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp TGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCAGCAGGCGCCGGCCACTaGTCGATCTCACTGCACACT +
Preference number: 4 (lower is better)
Translates to: CAAALRKPSEARLCCGEAAGAGH*SISLHT
Trigger: AGTGTGCAGTGAGATCGACCAGTGGCCGGCGCCTGC...TGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp CAGTCAGGAGGCCCAAGCTGCATTTGGGGCCAGGACCTTTCTCACCCTCGGGTCCCGACTCGGAGGATGTaGGGCCAGTGCTGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: QSGGPSCIWGQDLSHPRVPTRRM*GQCWSV
Trigger: AACACTCCAGCACTGGCCCCACATCCTCCGAGTCGG...GACCCGAGGGTGAGAAAGGTCCTGGCCCCAAATGCAGCTTGGGCCTCCTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GGGCACACAGTGCGTGATGCTGAGCAGGGCTTGGCTGTCCGGAGCCCTGACAGTAGCGGTGTAGAGGCCTaGCTTGGTGTCCAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: GHTVRDAEQGLAVRSPDSSGVEA*LGVQGL
Trigger: AAGACCCTGGACACCAAGCCAGGCCTCTACACCGCT...ACTGTCAGGGCTCCGGACAGCCAAGCCCTGCTCAGCATCACGCACTGTGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp CAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACCTGGCTGCCACCACTGGGGAGTaGGAGGCTCAGGCAGACCTA +
Preference number: 4 (lower is better)
Translates to: QSHPALKWLAVLALHHLAATTGE*EAQADL
Trigger: TAGGTCTGCCTGAGCCTCCCACTCCCCAGTGGTGGC...AGCCAGGTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GTGGCTCAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACGCCAGGAAGGTGCTGTaGCTCTCCGAGAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: VAQSHPALKWLAVLALHHARKVL*LSESQA
Trigger: AGCCTGGCTCTCGGAGAGCCACAGCACCTTCCTGGC...GTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTGAGCCAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp AGGCCAGGTGGGACCCAGGAGGAGGCAAGGCTCTGCCTGCGAGGAACCCCTATGGCTGCATGTGGGGGATaGACGGACACACTTGGACAA +
Preference number: 4 (lower is better)
Translates to: RPGGTQEEARLCLRGTPMAACGG*TDTLGQ
Trigger: TTGTCCAAGTGTGTCCGTCCATCCCCCACATGCAGC...CATAGGGGTTCCTCGCAGGCAGAGCCTTGCCTCCTCCTGGGTCCCACCTGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp TGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCAAGACCAAGCCCTCAGTaGGGAGGCTGGTCCCCCTGT +
Preference number: 4 (lower is better)
Translates to: CAAALRKPSEARLCCGEARPSPQ*GGWSPC
Trigger: ACAGGGGGACCAGCCTCCCCACTGAGGGCTTGGTCT...TGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GTGGCTCAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACCCCGACACCTTGAAGTaGTGGTCCTCAGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VAQSHPALKWLAVLALHHPDTLK*WSSGGW
Trigger: CCAGCCCCCTGAGGACCACCACTTCAAGGTGTCGGG...GTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTGAGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp AGGCCAGGTGGGACCCAGGAGGAGGCAAGGCTCTGCCTGCGAGGAACCCCTATGAGGGGTAGAGCTGTCTaGACCTTCCTGCCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RPGGTQEEARLCLRGTPMRGRAV*TFLPLH
Trigger: GTGAAGAGGCAGGAAGGTCCAGACAGCTCTACCCCT...CATAGGGGTTCCTCGCAGGCAGAGCCTTGCCTCCTCCTGGGTCCCACCTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CAA 72 bp GAGAGGTGGGTTGTCTTCCCAAGCTGCCCCGACACCTaGAAGTGGTGGTCCTCAGGGGGCTGGTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: ERWVVFPSCPDT*KWWSSGGWSPA
Trigger: TGCTGGTGACCAGCCCCCTGAGGACCACCACTTCAAGGTGTCGGGGCAGCTTGGGAAGACAACCCACCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp CTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGCATGTGTGTCGCCTTTACTGCTaGGACAATGGTGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LQPEAGSGRSPEPLGLHVCRLYC*DNGGAG
Trigger: TCCTGCACCACCATTGTCTCAGCAGTAAAGGCGACA...CACATGCAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp GTACCAAGTTCTGAGAACTACCTGGCGCCCGGACACCTGACCCCGCTGTCCTTGGGCAGCCTGTTGGGCTaGGGGAAGCATCACACACAG +
Preference number: 4 (lower is better)
Translates to: VPSSENYLAPGHLTPLSLGSLLG*GKHHTQ
Trigger: CTGTGTGTGATGCTTCCCTCAGCCCAACAGGCTGCC...CAAGGACAGCGGGGTCAGGTGTCCGGGCGCCAGGTAGTTCTCAGAACTTGGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGTGGGGTCACAGTTGTaGGAGAGGTGGGTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLVGSQL*ERWVVF
Trigger: GAAGACAACCCACCTCTCTCACAACTGTGACCCCAC...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp CAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACCTGGCTGTGCCACAGGGGCCCTaGTGTTGTAGTGCCTGTCGT +
Preference number: 4 (lower is better)
Translates to: QSHPALKWLAVLALHHLAVPQGP*CCSACR
Trigger: ACGACAGGCACTACAACAGCAGGGCCCCTGTGGCAC...AGCCAGGTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp CAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACCTGGCTCCACCCTGGATGGGATaGGCACCTGGACAACAACGC +
Preference number: 4 (lower is better)
Translates to: QSHPALKWLAVLALHHLAPPWMG*APGQQR
Trigger: GCGTTGTTGTCCAGGTGCGCATCCCATCCAGGGTGG...AGCCAGGTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTTCGCCAACTAAGTTCTaGCCAGCAAGCCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLSPTKF*PASPLA
Trigger: GGCAAGAGGGCTTGCTGGGCAGAACTTAGTTGGCGA...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GCCCTCTGTGCTGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTCTTGTCCACCCTGGATaGGATGCGCACCTGGACAAC +
Preference number: 4 (lower is better)
Translates to: ALCAVRQPSESQVRRDCALVHPG*DAHLDN
Trigger: GTTGTCCAGGTGCGCATCCCATCCAGGGTGGACAAG...AGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACAGCACAGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GGGCACACAGTGCGTGATGCTGAGCAGGGCTTGGCTGTCCGGAGCCCTGACAGTTGCGAGGAACCCCTATaGTCAAGGCCATGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: GHTVRDAEQGLAVRSPDSCEEPL*SRPCCG
Trigger: ACCACAGCATGGCCTTGACCATAGGGGTTCCTCGCA...ACTGTCAGGGCTCCGGACAGCCAAGCCCTGCTCAGCATCACGCACTGTGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GCCCTCTGTGCTGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTGGGCATCTGCATGGCTaGCTCGCTCAGATGAGGAGT +
Preference number: 4 (lower is better)
Translates to: ALCAVRQPSESQVRRDCAGHLHG*LAQMRS
Trigger: ACTCCTCATCTGAGCGAGCCAGCCATGCAGATGCCC...AGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACAGCACAGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp CAGTCAGGAGGCCCAAGCTGCATTTGGGGCCAGGACCTTTCTCACCCTCGGGTCAACCAAGCGCAGTGGTaGGTGCCTGTAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: QSGGPSCIWGQDLSHPRVNQAQW*VPVVPA
Trigger: AGCTGGGACTACAGGCACCCACCACTGCGCTTGGTT...GACCCGAGGGTGAGAAAGGTCCTGGCCCCAAATGCAGCTTGGGCCTCCTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp CAGTCAGGAGGCCCAAGCTGCATTTGGGGCCAGGACCTTTCTCACCCTCGGGTCACCCCGCTGTCCTTGTaGCTCAGTCACATCCTGCAC +
Preference number: 4 (lower is better)
Translates to: QSGGPSCIWGQDLSHPRVTPLSL*LSHILH
Trigger: GTGCAGGATGTGACTGAGCCACAAGGACAGCGGGGT...GACCCGAGGGTGAGAAAGGTCCTGGCCCCAAATGCAGCTTGGGCCTCCTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp CAGTCAGGAGGCCCAAGCTGCATTTGGGGCCAGGACCTTTCTCACCCTCGGGTCTCACACGCCACTATGTaGCCTCACCAGAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: QSGGPSCIWGQDLSHPRVSHATM*PHQSPP
Trigger: TGGAGGGCTCTGGTGAGGCCACATAGTGGCGTGTGA...GACCCGAGGGTGAGAAAGGTCCTGGCCCCAAATGCAGCTTGGGCCTCCTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp AAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCACATGCTGCCACGGTCCTTGCTCCAGGTCGAAGGTaGCCACGCACACACACTCCA +
Preference number: 4 (lower is better)
Translates to: KPSEARLCCGEAHAATVLAPGRR*PRTHTP
Trigger: TGGAGTGTGTGTGCGTGGTCACCTTCGACCTGGAGC...AAGGACCGTGGCAGCATGTGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp GGGCACACAGTGCGTGATGCTGAGCAGGGCTTGGCTGTCCGGAGCCCTGACAGTTGTCCTTCACCTGCCTaGAGTACACGTAGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: GHTVRDAEQGLAVRSPDSCPSPA*STRSRS
Trigger: ACTTCGGCTACGTGTACTTCAGGCAGGTGAAGGACA...ACTGTCAGGGCTCCGGACAGCCAAGCCCTGCTCAGCATCACGCACTGTGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp GTACCAAGTTCTGAGAACTACCTGGCGCCCGGACACCTGACCCCGCTGTCCTTGCGCTGTCATGGATGGTaGAGTAGGGACGGAAGTCGC +
Preference number: 4 (lower is better)
Translates to: VPSSENYLAPGHLTPLSLRCHGW*SRDGSR
Trigger: GCGACTTCCGTCCCTACTTCACCATCCATGACAGCG...CAAGGACAGCGGGGTCAGGTGTCCGGGCGCCAGGTAGTTCTCAGAACTTGGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp CAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACCTGGCTCCTCAGAAAGCCAAGTaGGGCGAGACTGTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QSHPALKWLAVLALHHLAPQKAK*GETVLW
Trigger: CCACAGCACAGTCTCGCCTCACTTGGCTTTCTGAGG...AGCCAGGTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp AAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCACATGCTGCCACGGTCCTTCAGATAGCCTCCAGGTaGAGGGCCTCCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KPSEARLCCGEAHAATVLQIASR*RASSFR
Trigger: CCTGAAGCTGGAGGCCCTGCACCTGGAGGCTATCTG...AAGGACCGTGGCAGCATGTGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp AAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCACATGCTGCCACGGTCCTTAGGCTGGTCCCCCTGTaGTACAGTCAGGAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: KPSEARLCCGEAHAATVLRLVPL*YSQEAQ
Trigger: TTGGGCCTCCTGACTGTAGCACAGGGGGACCAGCCT...AAGGACCGTGGCAGCATGTGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp AAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCACATGCTGCCACGGTCCTTCTGTGGGGAAGCACATaGTGCCACGGTCCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: KPSEARLCCGEAHAATVLLWGST*CHGPWG
Trigger: ACCCCAAGGACCGTGGCAGCATGTGCTTCCCCACAG...AAGGACCGTGGCAGCATGTGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GCCCTCTGTGCTGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTGATGGGATGCGCACCTaGACAACAACGCCCATGACA +
Preference number: 4 (lower is better)
Translates to: ALCAVRQPSESQVRRDCADGMRT*TTTPMT
Trigger: TGTCATGGGCGTTGTTGTCCAGGTGCGCATCCCATC...AGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACAGCACAGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GGGCACACAGTGCGTGATGCTGAGCAGGGCTTGGCTGTCCGGAGCCCTGACAGTAACAGGTCCAGCTCGTaGACGCTAGCAAGAACCACT +
Preference number: 4 (lower is better)
Translates to: GHTVRDAEQGLAVRSPDSNRSSS*TLARTT
Trigger: AGTGGTTCTTGCTAGCGTCCACGAGCTGGACCTGTT...ACTGTCAGGGCTCCGGACAGCCAAGCCCTGCTCAGCATCACGCACTGTGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTCATACAACCCAGAGGTaGCTCTTAGGGACGTTCACC +
Preference number: 4 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLHTTQR*LLGTFT
Trigger: GGTGAACGTCCCTAAGAGCCACCTCTGGGTTGTATG...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp AATCTGCTTGTGCATTTCTGGATACACAGTGGCCAGGGTCCCTGGGGGCTCCTCAGGGACAGGCTGTCCTaGGCTGCAGTTGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: NLLVHFWIHSGQGPWGLLRDRLS*AAVGLD
Trigger: GTCCAGCCCAACTGCAGCCCAGGACAGCCTGTCCCT...GAGGAGCCCCCAGGGACCCTGGCCACTGTGTATCCAGAAATGCACAAGCAGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GTGGCTCAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACGACACCTTGAAGTGGTaGTCCTCAGGGGGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: VAQSHPALKWLAVLALHHDTLKW*SSGGWS
Trigger: TGACCAGCCCCCTGAGGACCACCACTTCAAGGTGTC...GTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTGAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp CAGTCAGGAGGCCCAAGCTGCATTTGGGGCCAGGACCTTTCTCACCCTCGGGTCGTGCGCTCCCCAAAGTaGGGTCACAGTTGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: QSGGPSCIWGQDLSHPRVVRSPK*GHSCER
Trigger: TCTCTCACAACTGTGACCCCACTTTGGGGAGCGCAC...GACCCGAGGGTGAGAAAGGTCCTGGCCCCAAATGCAGCTTGGGCCTCCTGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp AGGTGGCTCTTAGGGACGTTCACCCCTTACCAAGGAAAGGGAGACATGCAGGCTTTCACTGACTGCCCCTaGCCTGGAGTGCGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: RWLLGTFTPYQGKGDMQAFTDCP*PGVRGA
Trigger: CGCCCCACGCACTCCAGGCCAGGGGCAGTCAGTGAA...AGCCTGCATGTCTCCCTTTCCTTGGTAAGGGGTGAACGTCCCTAAGAGCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp CTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGCCTCAGAAGAAAAAGAAACCGCGCCGCGCGACCTaGAGACGTGGGTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LNEGYIPRTEWGPQKKKKPRRAT*RRGSSR
Trigger: GCGGCTGGACCCACGTCTTCAGGTCGCGCGGCGCGG...TTTCTTTTTCTTCTGAGGCCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp TGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCACACAGTGTCTGCATATaGGTCAGCACAGGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: CAAALRKPSEARLCCGEAHSVCI*VSTGRK
Trigger: CTTCCGGCCTGTGCTGACTCATATGCAGACACTGTG...TGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp AGGTGGCTCTTAGGGACGTTCACCCCTTACCAAGGAAAGGGAGACATGCAGGCTGGCGCTCTGCACATCTaGCGGCCGCTTCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: RWLLGTFTPYQGKGDMQAGALHI*RPLLLH
Trigger: GTGCAGAAGAAGCGGCCGTCAGATGTGCAGAGCGCC...AGCCTGCATGTCTCCCTTTCCTTGGTAAGGGGTGAACGTCCCTAAGAGCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp CACAAACAGTACGTTGCGCTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGGGGAGCTGGTGGCCCTaGGCCCGCACCAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: HKQYVALNEGYIPRTEWGGSWWP*ARTSFS
Trigger: TGAGAAGCTGGTGCGGGCTCAGGGCCACCAGCTCCC...CCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAGCGCAACGTACTGTTTGTG
59% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp AGGTGGCTCTTAGGGACGTTCACCCCTTACCAAGGAAAGGGAGACATGCAGGCTAAAGCCCAGTCTCCATaGGTGGCCCTCCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: RWLLGTFTPYQGKGDMQAKAQSP*VALPAP
Trigger: GGGTGCTGGGAGGGCCACTCATGGAGACTGGGCTTT...AGCCTGCATGTCTCCCTTTCCTTGGTAAGGGGTGAACGTCCCTAAGAGCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp GGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGCATGTGGGGGATGGACGGACACAACAGTACGTTGCGCTaGATGAAGGCTACATTCCTC +
Preference number: 4 (lower is better)
Translates to: GQAEVQSPLGCMWGMDGHNSTLR*MKATFL
Trigger: GAGGAATGTAGCCTTCATTCAGCGCAACGTACTGTT...GTGTCCGTCCATCCCCCACATGCAGCCCAAGGGGCTCTGGACTTCGGCCTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp AAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCACATGCTGCCACGGTCCTTAGTCACATCCTGCACTaGAGTGGCTGGCAGTGCTCG +
Preference number: 4 (lower is better)
Translates to: KPSEARLCCGEAHAATVLSHILH*SGWQCS
Trigger: CGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACT...AAGGACCGTGGCAGCATGTGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp AATCTGCTTGTGCATTTCTGGATACACAGTGGCCAGGGTCCCTGGGGGCTCCTCGTAGCCGAAGTAGTGTaGCGGCTCCCTCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: NLLVHFWIHSGQGPWGLLVAEVV*RLPLQC
Trigger: GCACTGCAGAGGGAGCCGGCACACTACTTCGGCTAC...GAGGAGCCCCCAGGGACCCTGGCCACTGTGTATCCAGAAATGCACAAGCAGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp AATCTGCTTGTGCATTTCTGGATACACAGTGGCCAGGGTCCCTGGGGGCTCCTCGATCTCACTGCACACTaGTTCCAGGCAGGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: NLLVHFWIHSGQGPWGLLDLTAH*FQAGRQ
Trigger: CTGGCGCCCTGCCTGGAAGCAGTGTGCAGTGAGATC...GAGGAGCCCCCAGGGACCCTGGCCACTGTGTATCCAGAAATGCACAAGCAGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp AGGCCAGGTGGGACCCAGGAGGAGGCAAGGCTCTGCCTGCGAGGAACCCCTATGAGGATGTGGGGCCAGTaGTGGAGTGTTTTGATAAAG +
Preference number: 4 (lower is better)
Translates to: RPGGTQEEARLCLRGTPMRMWGQ*WSVLIK
Trigger: CTTTATCAAAACACTCCAGCACTGGCCCCACATCCT...CATAGGGGTTCCTCGCAGGCAGAGCCTTGCCTCCTCCTGGGTCCCACCTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp AGGTGGCTCTTAGGGACGTTCACCCCTTACCAAGGAAAGGGAGACATGCAGGCTGACGGCCGCTTCTTCTaGACGCCCTTGAGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: RWLLGTFTPYQGKGDMQADGRFF*TPLSSR
Trigger: ACGGCTGCTCAAGGGCGTGCAGAAGAAGCGGCCGTC...AGCCTGCATGTCTCCCTTTCCTTGGTAAGGGGTGAACGTCCCTAAGAGCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp GGGCACACAGTGCGTGATGCTGAGCAGGGCTTGGCTGTCCGGAGCCCTGACAGTCTATGGTCAAGGCCATaGTGTGGTTCCAAATGTCGC +
Preference number: 4 (lower is better)
Translates to: GHTVRDAEQGLAVRSPDSLWSRP*CGSKCR
Trigger: GCGACATTTGGAACCACAGCATGGCCTTGACCATAG...ACTGTCAGGGCTCCGGACAGCCAAGCCCTGCTCAGCATCACGCACTGTGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp GTACCAAGTTCTGAGAACTACCTGGCGCCCGGACACCTGACCCCGCTGTCCTTGCGTCACTGTGTGCTGTaGAGGGTCAACACCGTACCT +
Preference number: 4 (lower is better)
Translates to: VPSSENYLAPGHLTPLSLRHCVL*RVNTVP
Trigger: AGGTACGGTGTTGACCCTGCACAGCACACAGTGACG...CAAGGACAGCGGGGTCAGGTGTCCGGGCGCCAGGTAGTTCTCAGAACTTGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp CAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACCTGGCTGGCTCAGTCACATCCTaGACTGAAGTGGCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: QSHPALKWLAVLALHHLAGSVTS*TEVAGS
Trigger: ACTGCCAGCCACTTCAGTGCAGGATGTGACTGAGCC...AGCCAGGTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp AAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCACATGCTGCCACGGTCCTTTCAGGAGGCCCAAGCTaGATTTGGGGCCAGGACCTT +
Preference number: 4 (lower is better)
Translates to: KPSEARLCCGEAHAATVLSGGPS*IWGQDL
Trigger: AAGGTCCTGGCCCCAAATGCAGCTTGGGCCTCCTGA...AAGGACCGTGGCAGCATGTGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp GTACCAAGTTCTGAGAACTACCTGGCGCCCGGACACCTGACCCCGCTGTCCTTGGGTCAGCATTCAAGCTaGCCACACAAGAGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: VPSSENYLAPGHLTPLSLGQHSS*PHKRCQ
Trigger: CTGGCACCTCTTGTGTGGGCAGCTTGAATGCTGACC...CAAGGACAGCGGGGTCAGGTGTCCGGGCGCCAGGTAGTTCTCAGAACTTGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp CAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACCTGGCTAGTGAGGCGAGACTGTaGTGTGGGGAAGCACATGCT +
Preference number: 4 (lower is better)
Translates to: QSHPALKWLAVLALHHLASEARL*CGEAHA
Trigger: AGCATGTGCTTCCCCACAGCACAGTCTCGCCTCACT...AGCCAGGTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp CTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGCATGTGCCCTCCAGGGAAATCTaGTTGTGCATTTCTGGATAC +
Preference number: 4 (lower is better)
Translates to: LQPEAGSGRSPEPLGLHVPSREI*LCISGY
Trigger: GTATCCAGAAATGCACAAGCAGATTTCCCTGGAGGG...CACATGCAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp AGGTGGCTCTTAGGGACGTTCACCCCTTACCAAGGAAAGGGAGACATGCAGGCTGGGGCTGCAGGCAGCTaGTCAAGGCCAGCACCATCT +
Preference number: 4 (lower is better)
Translates to: RWLLGTFTPYQGKGDMQAGAAGS*SRPAPS
Trigger: AGATGGTGCTGGCCTTGACCAGCTGCCTGCAGCCCC...AGCCTGCATGTCTCCCTTTCCTTGGTAAGGGGTGAACGTCCCTAAGAGCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GCCCTCTGTGCTGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTCCAGGCCCCATCTTATaGAGGTCAGCATTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: ALCAVRQPSESQVRRDCAPGPIL*RSAFKL
Trigger: CAGCTTGAATGCTGACCTCCATAAGATGGGGCCTGG...AGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACAGCACAGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp GTGGCTCAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACCTACATTCCTCGGACTaGATGGGGGCCTCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: VAQSHPALKWLAVLALHHLHSSD*MGASEE
Trigger: TTCTTCTGAGGCCCCCATTCAGTCCGAGGAATGTAG...GTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTGAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp CAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACCTGGCTGTACGTTGCGCTGAATaGAGGCTACATTCCTCGGAC +
Preference number: 4 (lower is better)
Translates to: QSHPALKWLAVLALHHLAVRCAE*RLHSSD
Trigger: GTCCGAGGAATGTAGCCTTCATTCAGCGCAACGTAC...AGCCAGGTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp CACAAACAGTACGTTGCGCTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGTGCCTGTCGTCGGCATaGCAGGGGCTCCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: HKQYVALNEGYIPRTEWGCLSSA*QGLLCP
Trigger: AGGGCAGAGGAGCCCCTGGCATGCCGACGACAGGCA...CCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAGCGCAACGTACTGTTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp AAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCACATGCTGCCACGGTCCTTACTGGTCGATCTCACTaGACACTGCTTCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: KPSEARLCCGEAHAATVLTGRSH*TLLPGR
Trigger: CCTGCCTGGAAGCAGTGTGCAGTGAGATCGACCAGT...AAGGACCGTGGCAGCATGTGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp AGGCCAGGTGGGACCCAGGAGGAGGCAAGGCTCTGCCTGCGAGGAACCCCTATGTTTTTCAGCTTGACTTaGTTAGGCAGGTCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: RPGGTQEEARLCLRGTPMFFSLT*LGRSPD
Trigger: GTCAGGAGACCTGCCTAAGCAAGTCAAGCTGAAAAA...CATAGGGGTTCCTCGCAGGCAGAGCCTTGCCTCCTCCTGGGTCCCACCTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp GGCCATGCTGTGGTTCCAAATGTCGCCTTTACTGCTGAGACAATGGTGGTGCAGAGGGCCATCTCCTTGTaGCGCTGCCGGTACCAGCCA +
Preference number: 4 (lower is better)
Translates to: GHAVVPNVAFTAETMVVQRAISL*RCRYQP
Trigger: TGGCTGGTACCGGCAGCGGCACAAGGAGATGGCCCT...CTGCACCACCATTGTCTCAGCAGTAAAGGCGACATTTGGAACCACAGCATGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp AGGTGGCTCTTAGGGACGTTCACCCCTTACCAAGGAAAGGGAGACATGCAGGCTCGGACTTGTCCACCCTaGATGGGATGCGCACCTGGA +
Preference number: 4 (lower is better)
Translates to: RWLLGTFTPYQGKGDMQARTCPP*MGCAPG
Trigger: TCCAGGTGCGCATCCCATCCAGGGTGGACAAGTCCG...AGCCTGCATGTCTCCCTTTCCTTGGTAAGGGGTGAACGTCCCTAAGAGCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp AATCTGCTTGTGCATTTCTGGATACACAGTGGCCAGGGTCCCTGGGGGCTCCTCCTGCTGAGACAATGGTaGTGCAGGAAGGGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: NLLVHFWIHSGQGPWGLLLLRQW*CRKGSL
Trigger: CAGGCTCCCCTTCCTGCACCACCATTGTCTCAGCAG...GAGGAGCCCCCAGGGACCCTGGCCACTGTGTATCCAGAAATGCACAAGCAGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
3UTR CAA 72 bp CTCGGGTCCCCGGCTTGTCCCTGCCACAGAACAGGTTaGCCACCTCGGCCTCTATGTGTTCTGTTTCATGTG +
Preference number: 4 (lower is better)
Translates to: LGSPACPCHRTG*PPRPLCVLFHV
Trigger: CACATGAAACAGAACACATAGAGGCCGAGGTGGCAAACCTGTTCTGTGGCAGGGACAAGCCGGGGACCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp CAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACCTGGCTTTTTCTCCTTGTCTGTaGGCCGGAAGTCGTTCGGAT +
Preference number: 4 (lower is better)
Translates to: QSHPALKWLAVLALHHLAFSPCL*AGSRSD
Trigger: ATCCGAACGACTTCCGGCTCACAGACAAGGAGAAAA...AGCCAGGTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp CAGGGACAGGCTGTCCTGGGCTGCAGTTGGGCTGGACAAGTTGACATGTACCAAATGCGGAAGCTGAACTaGGTGTCTCCAAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: QGQAVLGCSWAGQVDMYQMRKLN*VSPRQP
Trigger: AGGCTGCCTTGGAGACACTCAGTTCAGCTTCCGCAT...TTGGTACATGTCAACTTGTCCAGCCCAACTGCAGCCCAGGACAGCCTGTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp CAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACCTGGCTTTCTCTTGGTCAAACTaGTTCGGAGGACTGGACTCG +
Preference number: 4 (lower is better)
Translates to: QSHPALKWLAVLALHHLAFSWSN*FGGLDS
Trigger: CGAGTCCAGTCCTCCGAAGCAGTTTGACCAAGAGAA...AGCCAGGTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp CACAAACAGTACGTTGCGCTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGAGCTGGGGCCCAGCATaGTCCAGGCTACGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: HKQYVALNEGYIPRTEWGSWGPA*SRLRRK
Trigger: CTTCCTGCGTAGCCTGGAGCATGCTGGGCCCCAGCT...CCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAGCGCAACGTACTGTTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp GCCCTCTGTGCTGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTCAGAGCTCTTCACACTaGAAAGTGGTCTCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: ALCAVRQPSESQVRRDCAQSSSH*KVVSPF
Trigger: AAAGGGAGAGACCACTTTGCAGTGTGAAGAGCTCTG...AGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACAGCACAGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp AATCTGCTTGTGCATTTCTGGATACACAGTGGCCAGGGTCCCTGGGGGCTCCTCAGTACCGTCACTGTGTaGTGTGCAGGGTCAACACCG +
Preference number: 4 (lower is better)
Translates to: NLLVHFWIHSGQGPWGLLSTVTV*CAGSTP
Trigger: CGGTGTTGACCCTGCACAGCACACAGTGACGGTACT...GAGGAGCCCCCAGGGACCCTGGCCACTGTGTATCCAGAAATGCACAAGCAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp AGGTGGCTCTTAGGGACGTTCACCCCTTACCAAGGAAAGGGAGACATGCAGGCTCAGGCTGTCCTGGGCTaGAGTTGGGCTGGACAAGTT +
Preference number: 4 (lower is better)
Translates to: RWLLGTFTPYQGKGDMQAQAVLG*SWAGQV
Trigger: AACTTGTCCAGCCCAACTGCAGCCCAGGACAGCCTG...AGCCTGCATGTCTCCCTTTCCTTGGTAAGGGGTGAACGTCCCTAAGAGCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp CACAAACAGTACGTTGCGCTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGGCAGCCATGTGGGTCTaGAGCCCTCTGTGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: HKQYVALNEGYIPRTEWGAAMWV*SPLCCA
Trigger: CGCACAGCACAGAGGGCTGCAGACCCACATGGCTGC...CCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAGCGCAACGTACTGTTTGTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp CAGGGACAGGCTGTCCTGGGCTGCAGTTGGGCTGGACAAGTTGACATGTACCAAAAGAACCACTGGGGCTaGCAGCAGGTTCTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: QGQAVLGCSWAGQVDMYQKNHWG*QQVLLV
Trigger: GACCAAGAGAACCTGCTGCCAGCCCCAGTGGTTCTT...TTGGTACATGTCAACTTGTCCAGCCCAACTGCAGCCCAGGACAGCCTGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp AAGCCAAGTGAGGCGAGACTGTGCTGTGGGGAAGCACATGCTGCCACGGTCCTTATTAACCAAGCGCAGTaGTGGGTGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: KPSEARLCCGEAHAATVLINQAQ*WVPVVP
Trigger: TGGGACTACAGGCACCCACCACTGCGCTTGGTTAAT...AAGGACCGTGGCAGCATGTGCTTCCCCACAGCACAGTCTCGCCTCACTTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp AATCTGCTTGTGCATTTCTGGATACACAGTGGCCAGGGTCCCTGGGGGCTCCTCTCTCCACCACCTGGCTaGAGGTCTGAGAGCACCAAT +
Preference number: 4 (lower is better)
Translates to: NLLVHFWIHSGQGPWGLLSPPPG*RSESTN
Trigger: ATTGGTGCTCTCAGACCTCCAGCCAGGTGGTGGAGA...GAGGAGCCCCCAGGGACCCTGGCCACTGTGTATCCAGAAATGCACAAGCAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp CAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACCTGGCTATGTGGTCACATCCTTaGACCCTGCACCAGACATCT +
Preference number: 4 (lower is better)
Translates to: QSHPALKWLAVLALHHLAMWSHP*TLHQTS
Trigger: AGATGTCTGGTGCAGGGTCCAAGGATGTGACCACAT...AGCCAGGTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GGCCATGCTGTGGTTCCAAATGTCGCCTTTACTGCTGAGACAATGGTGGTGCAGGGCGAGACTGTGCTGTaGGGAAGCACATGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GHAVVPNVAFTAETMVVQGETVL*GSTCCH
Trigger: GTGGCAGCATGTGCTTCCCCACAGCACAGTCTCGCC...CTGCACCACCATTGTCTCAGCAGTAAAGGCGACATTTGGAACCACAGCATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GTACCAAGTTCTGAGAACTACCTGGCGCCCGGACACCTGACCCCGCTGTCCTTGCTGCTTGTGCATTTCTaGATACACAGTGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: VPSSENYLAPGHLTPLSLLLVHF*IHSGQG
Trigger: ACCCTGGCCACTGTGTATCCAGAAATGCACAAGCAG...CAAGGACAGCGGGGTCAGGTGTCCGGGCGCCAGGTAGTTCTCAGAACTTGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp CACAAACAGTACGTTGCGCTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGGAGTCTTCCAGGGCGTaGTGCTCTTCTGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: HKQYVALNEGYIPRTEWGESSRA*CSSAGA
Trigger: TGCCCCTGCAGAAGAGCATCACGCCCTGGAAGACTC...CCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAGCGCAACGTACTGTTTGTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp GGCCATGCTGTGGTTCCAAATGTCGCCTTTACTGCTGAGACAATGGTGGTGCAGCCAAGGCAGCCTGAGTaGGAGTCGGGAAAAGACAGG +
Preference number: 4 (lower is better)
Translates to: GHAVVPNVAFTAETMVVQPRQPE*ESGKDR
Trigger: CCTGTCTTTTCCCGACTCGCACTCAGGCTGCCTTGG...CTGCACCACCATTGTCTCAGCAGTAAAGGCGACATTTGGAACCACAGCATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp CTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGCCTCAGAAGAAAAAGAAAGACGCACGGAGCTGGTaGCTGGTGGGGGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LNEGYIPRTEWGPQKKKKDARSW*LVGAPG
Trigger: TCCTGGAGCCCCCACCAGGCACCAGCTCCGTGCGTC...TTTCTTTTTCTTCTGAGGCCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp AATCTGCTTGTGCATTTCTGGATACACAGTGGCCAGGGTCCCTGGGGGCTCCTCAGGTGCCAGCATCTCTaGAGACCCTCTAGAGACCAA +
Preference number: 4 (lower is better)
Translates to: NLLVHFWIHSGQGPWGLLRCQHL*RPSRDQ
Trigger: TTGGTCTCTAGAGGGTCTGCAGAGATGCTGGCACCT...GAGGAGCCCCCAGGGACCCTGGCCACTGTGTATCCAGAAATGCACAAGCAGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTATGTGGGGCCAGTGCTaGAGTGTTTTGATAAAGAAA +
Preference number: 4 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLMWGQC*SVLIKK
Trigger: TTTCTTTATCAAAACACTCCAGCACTGGCCCCACAT...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp AGGTGGCTCTTAGGGACGTTCACCCCTTACCAAGGAAAGGGAGACATGCAGGCTATGGACGGACACACTTaGACAACAGGAGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: RWLLGTFTPYQGKGDMQAMDGHT*TTGALS
Trigger: GGACAGGGCTCCTGTTGTCCAAGTGTGTCCGTCCAT...AGCCTGCATGTCTCCCTTTCCTTGGTAAGGGGTGAACGTCCCTAAGAGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GTGGCTCAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACGTGTTCTGTTTCATGTaGTCACATCCTTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: VAQSHPALKWLAVLALHHVFCFM*SHPWTL
Trigger: CAGGGTCCAAGGATGTGACCACATGAAACAGAACAC...GTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTGAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp CACAAACAGTACGTTGCGCTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGTACAGCTGTGCCCGCTaGAGCGTAGCCTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: HKQYVALNEGYIPRTEWGYSCAR*SVASFT
Trigger: TGTGAAGGAGGCTACGCTGCAGCGGGCACAGCTGTA...CCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAGCGCAACGTACTGTTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp GGCCATGCTGTGGTTCCAAATGTCGCCTTTACTGCTGAGACAATGGTGGTGCAGCACATCCTTGGACCCTaGACCAGACATCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: GHAVVPNVAFTAETMVVQHILGP*TRHLGL
Trigger: AAGCCCCAGATGTCTGGTGCAGGGTCCAAGGATGTG...CTGCACCACCATTGTCTCAGCAGTAAAGGCGACATTTGGAACCACAGCATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp CACAAACAGTACGTTGCGCTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGTCCCCGGCTTGTCCCTaGCACAGAACAGGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: HKQYVALNEGYIPRTEWGSPACP*HRTGLP
Trigger: TGGCAAACCTGTTCTGTGGCAGGGACAAGCCGGGGA...CCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAGCGCAACGTACTGTTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp CTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGCCTCAGAAGAAAAAGAAAACCCCAGGCCTCTTCTaGACAGGTGGGGACAGGCCC +
Preference number: 4 (lower is better)
Translates to: LNEGYIPRTEWGPQKKKKTPGLF*TGGDRP
Trigger: GGGCCTGTCCCCACCTGTGCAGAAGAGGCCTGGGGT...TTTCTTTTTCTTCTGAGGCCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp GGCCATGCTGTGGTTCCAAATGTCGCCTTTACTGCTGAGACAATGGTGGTGCAGATCTCCTTGTGCCGCTaGCGGTACCAGCCATCAAAA +
Preference number: 4 (lower is better)
Translates to: GHAVVPNVAFTAETMVVQISLCR*RYQPSK
Trigger: TTTTGATGGCTGGTACCGGCAGCGGCACAAGGAGAT...CTGCACCACCATTGTCTCAGCAGTAAAGGCGACATTTGGAACCACAGCATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp CTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGCCTCAGAAGAAAAAGAAATTCTGCCCAGGGCAATaGTGGCCACCCAGCCCGGTT +
Preference number: 4 (lower is better)
Translates to: LNEGYIPRTEWGPQKKKKFCPGQ*WPPSPV
Trigger: AACCGGGCTGGGTGGCCAGCATTGCCCTGGGCAGAA...TTTCTTTTTCTTCTGAGGCCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp CTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGCCTCAGAAGAAAAAGAAATCCCCTGCAGCCATGTaGGTCTGCAGCCCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: LNEGYIPRTEWGPQKKKKSPAAM*VCSPLC
Trigger: GCACAGAGGGCTGCAGACCCACATGGCTGCAGGGGA...TTTCTTTTTCTTCTGAGGCCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp CTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGCCTCAGAAGAAAAAGAAAACGTTTGGTGGGGCCTaGGTGCGTGTGGTGAACTCC +
Preference number: 4 (lower is better)
Translates to: LNEGYIPRTEWGPQKKKKTFGGA*VRVVNS
Trigger: GGAGTTCACCACACGCACGCAGGCCCCACCAAACGT...TTTCTTTTTCTTCTGAGGCCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp CACAAACAGTACGTTGCGCTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGGGCAGCAGGTTCTCTTaGTCAAACTGCTTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: HKQYVALNEGYIPRTEWGGSRFS*SNCFGG
Trigger: TCCTCCGAAGCAGTTTGACCAAGAGAACCTGCTGCC...CCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAGCGCAACGTACTGTTTGTG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR TCA 90 bp CTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGCCTCAGAAGAAAAAGAAATCTTCTGCAGGGGCATaGGGCTGGCCATGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: LNEGYIPRTEWGPQKKKKSSAGA*GWPCSA
Trigger: AGCACTACATGGCCAGCCTCATGCCCCTGCAGAAGA...TTTCTTTTTCTTCTGAGGCCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp CTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGCCTCAGAAGAAAAAGAAAACTGCTTCGGAGGACTaGACTCGGACTTGTCCACCC +
Preference number: 4 (lower is better)
Translates to: LNEGYIPRTEWGPQKKKKTASED*TRTCPP
Trigger: GGGTGGACAAGTCCGAGTCCAGTCCTCCGAAGCAGT...TTTCTTTTTCTTCTGAGGCCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp GGCCATGCTGTGGTTCCAAATGTCGCCTTTACTGCTGAGACAATGGTGGTGCAGATTCCTCGGACTGAATaGGGGCCTCAGAAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: GHAVVPNVAFTAETMVVQIPRTE*GPQKKK
Trigger: CTTTTTCTTCTGAGGCCCCCATTCAGTCCGAGGAAT...CTGCACCACCATTGTCTCAGCAGTAAAGGCGACATTTGGAACCACAGCATGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp CTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGCCTCAGAAGAAAAAGAAAGCCACAGAACAGGTTTaGCACCTCGGCCTCTATGTG +
Preference number: 4 (lower is better)
Translates to: LNEGYIPRTEWGPQKKKKATEQV*HLGLYV
Trigger: CACATAGAGGCCGAGGTGGCAAACCTGTTCTGTGGC...TTTCTTTTTCTTCTGAGGCCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CCA 90 bp CTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGCCTCAGAAGAAAAAGAAACCTGCACCAGACATCTaGGGCTTAACAGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: LNEGYIPRTEWGPQKKKKPAPDI*GLTAPL
Trigger: AAGGGGAGCTGTTAAGCCCCAGATGTCTGGTGCAGG...TTTCTTTTTCTTCTGAGGCCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp AGGTGGCTCTTAGGGACGTTCACCCCTTACCAAGGAAAGGGAGACATGCAGGCTAAGTTGATGACTATATaGAAAATAGCCTCCCATCCC +
Preference number: 4 (lower is better)
Translates to: RWLLGTFTPYQGKGDMQAKLMTI*KIASHP
Trigger: GGGATGGGAGGCTATTTTGCATATAGTCATCAACTT...AGCCTGCATGTCTCCCTTTCCTTGGTAAGGGGTGAACGTCCCTAAGAGCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR GCA 90 bp GGCCATGCTGTGGTTCCAAATGTCGCCTTTACTGCTGAGACAATGGTGGTGCAGAGGGAAATCTGCTTGTaGATTTCTGGATACACAGTG +
Preference number: 4 (lower is better)
Translates to: GHAVVPNVAFTAETMVVQREICL*ISGYTV
Trigger: CACTGTGTATCCAGAAATGCACAAGCAGATTTCCCT...CTGCACCACCATTGTCTCAGCAGTAAAGGCGACATTTGGAACCACAGCATGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS CCA 90 bp CGCCTTGTCGCGGTGGAGGTGGGCCGTGTAAGCGGTGTAGAGGCCTaGCGGGAGGGCACAGCTGGCGCCCCACCCTTCAAGGGCCTCCCT +
Preference number: 5 (lower is better)
Translates to: RLVAVEVGRVSGVEA*REGTAGAPPFKGLP
Trigger: AGGGAGGCCCTTGAAGGGTGGGGCGCCAGCTGTGCCCTCCCGCCAGGCCTCTACACCGCTTACACGGCCCACCTCCACCGCGACAAGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495607.5
CDS-3UTR CAA 90 bp TGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGAAGGGGAGCGTGTGCTaGGCCCAGTGCCGCCACCAC +
Preference number: 5 (lower is better)
Translates to: CRLQPEAGSGRSPEPLGLKGSVC*AQCRHH
Trigger: GTGGTGGCGGCACTGGGCCAAGCACACGCTCCCCTT...CAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CAA 90 bp AGGCCAGGTGGGACCCAGGAGGAGGCAAGGCTCTGCCTGCGAGGAACCCCTATGGCCCAGCAAGCCCTCTaGCCTGCGGGGGCTGGCACT +
Preference number: 5 (lower is better)
Translates to: RPGGTQEEARLCLRGTPMAQQAL*PAGAGT
Trigger: AGTGCCAGCCCCCGCAGGCAAGAGGGCTTGCTGGGC...CATAGGGGTTCCTCGCAGGCAGAGCCTTGCCTCCTCCTGGGTCCCACCTGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CAA 90 bp TGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGCCCTTGAGCAGCCGTTaGAGCAGCGCCTTGTCGCGG +
Preference number: 5 (lower is better)
Translates to: CRLQPEAGSGRSPEPLGLPLSSR*SSALSR
Trigger: CCGCGACAAGGCGCTGCTCAAACGGCTGCTCAAGGG...CAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CAA 90 bp AGGCCAGGTGGGACCCAGGAGGAGGCAAGGCTCTGCCTGCGAGGAACCCCTATGCCTCGGGTCCCCGGCTaGTCCCTGCCACAGAACAGG +
Preference number: 5 (lower is better)
Translates to: RPGGTQEEARLCLRGTPMPRVPG*SLPQNR
Trigger: CCTGTTCTGTGGCAGGGACAAGCCGGGGACCCGAGG...CATAGGGGTTCCTCGCAGGCAGAGCCTTGCCTCCTCCTGGGTCCCACCTGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS TCA 90 bp GGTGAGCTCCAGGAGGTGCCGCCGCAGCAGGGCGCTCTGCACATCTaGCGGCCGCTTCTTCTGCACGCCCTTGAGCAGCCGTTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: GELQEVPPQQGALHI*RPLLLHALEQPFEQ
Trigger: CTGCTCAAACGGCTGCTCAAGGGCGTGCAGAAGAAGCGGCCGTCAGATGTGCAGAGCGCCCTGCTGCGGCGGCACCTCCTGGAGCTCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413817.8
ENST00000495607.5
CDS GCA 90 bp AAGCTCTGGGTGAGCTCCAGGAGGTGCCGCCGCAGCAGGGCGCTCTaGACATCTGACGGCCGCTTCTTCTGCACGCCCTTGAGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: KLWVSSRRCRRSRAL*TSDGRFFCTPLSSR
Trigger: ACGGCTGCTCAAGGGCGTGCAGAAGAAGCGGCCGTCAGATGTGCAGAGCGCCCTGCTGCGGCGGCACCTCCTGGAGCTCACCCAGAGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413817.8
ENST00000495607.5
CDS-3UTR CAA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTCGTTTGAGCAGCGCCTaGTCGCGGTGGAGGTGGGCC +
Preference number: 5 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLRLSSA*SRWRWA
Trigger: GGCCCACCTCCACCGCGACAAGGCGCTGCTCAAACG...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS GCA 90 bp AGGTGCAGGCGCCGGCCACTGGTCGATCTCACTGCACACTGCGGATaGAGTAGCCCGCATCAGGACCCTCCCCAAGGAGAAGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: RCRRRPLVDLTAHCG*SSPHQDPPQGEAAA
Trigger: GGCAGCAGCTTCTCCTTGGGGAGGGTCCTGATGCGGGCTACTGCATCCGCAGTGTGCAGTGAGATCGACCAGTGGCCGGCGCCTGCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495607.5
CDS GCA 90 bp CTGCCCAGGTGCAGGCGCCGGCCACTGGTCGATCTCACTGCACACTaGGGATGCAGTAGCCCGCATCAGGACCCTCCCCAAGGAGAAGCT +
Preference number: 5 (lower is better)
Translates to: LPRCRRRPLVDLTAH*GCSSPHQDPPQGEA
Trigger: AGCTTCTCCTTGGGGAGGGTCCTGATGCGGGCTACTGCATCCGCAGTGTGCAGTGAGATCGACCAGTGGCCGGCGCCTGCACCTGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495607.5
CDS-3UTR CAA 90 bp TGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGGGACTGGACTCGGACTaGTCCACCCTGGATGGGATG +
Preference number: 5 (lower is better)
Translates to: CRLQPEAGSGRSPEPLGLGLDSD*STLDGM
Trigger: CATCCCATCCAGGGTGGACAAGTCCGAGTCCAGTCC...CAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CAA 90 bp CTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGCATGTGATGCTGCCACGGTCCTaGGGGTGCGCTCCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: LQPEAGSGRSPEPLGLHVMLPRS*GCAPQS
Trigger: ACTTTGGGGAGCGCACCCCAAGGACCGTGGCAGCAT...CACATGCAGCCCAAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS GCA 90 bp CCCAGCCAGTCGCCCTTGAGGATGCAGGTGAGCTGGGGCCCAGCATaGTCCAGGCTACGCAGGAAGTCATCCTGGCTGAAGGGCTGGATC +
Preference number: 5 (lower is better)
Translates to: PSQSPLRMQVSWGPA*SRLRRKSSWLKGWI
Trigger: GATCCAGCCCTTCAGCCAGGATGACTTCCTGCGTAGCCTGGAGCATGCTGGGCCCCAGCTCACCTGCATCCTCAAGGGCGACTGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413817.8
ENST00000495607.5
CDS GCA 90 bp CAGGTCTTTGGGCAGGGAGCCGATGACCGTCTCGATGTACAGCTGTaGCCGCTGCAGCGTAGCCTCCTTCACAGGGAGCTGGTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: QVFGQGADDRLDVQL*PLQRSLLHRELVAL
Trigger: CAGGGCCACCAGCTCCCTGTGAAGGAGGCTACGCTGCAGCGGGCACAGCTGTACATCGAGACGGTCATCGGCTCCCTGCCCAAAGACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413817.8
ENST00000495607.5
CDS-3UTR CAA 90 bp GCCCTCTGTGCTGTGCGGCAGCCCTCAGAAAGCCAAGTGAGGCGAGACTGTGCTGATGCTGAGCAGGGCTaGGCTGTCCGGAGCCCTGAC +
Preference number: 5 (lower is better)
Translates to: ALCAVRQPSESQVRRDCADAEQG*AVRSPD
Trigger: GTCAGGGCTCCGGACAGCCAAGCCCTGCTCAGCATC...AGCACAGTCTCGCCTCACTTGGCTTTCTGAGGGCTGCCGCACAGCACAGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS TCA 90 bp CTGCTTCCAGGCAGGGCGCCAGCTTGTCAAAGTACTCGGGGGCGATaGGGCTTAGCAGCGCTTGGAACAGCCGGACAAAGGGCAAGCGGG +
Preference number: 5 (lower is better)
Translates to: LLPGRAPACQSTRGR*GLAALGTAGQRASG
Trigger: CCCGCTTGCCCTTTGTCCGGCTGTTCCAAGCGCTGCTAAGCCTCATCGCCCCCGAGTACTTTGACAAGCTGGCGCCCTGCCTGGAAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413817.8
ENST00000433760.1
ENST00000471942.6
ENST00000495607.5
CDS CCA 90 bp GGAGAAAACCCAACACTGAACTCCCTGGGTGGCGGCCGGTGGGGCTaGACCCTAGGGCCTTCGGAGGGAAACGCACGGTGGCCAGAATTT +
Preference number: 5 (lower is better)
Translates to: GENPTLNSLGGGRWG*TLGPSEGNARWPEF
Trigger: AAATTCTGGCCACCGTGCGTTTCCCTCCGAAGGCCCTAGGGTCCAGCCCCACCGGCCGCCACCCAGGGAGTTCAGTGTTGGGTTTTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460087.1
CDS GCA 90 bp ATGCGCACCTGGACAACAACGCCCATGACAGGTAGGTTCAGGGTCTaGCCAGGTGCAGGCGCCGGCCACTGGTCGATCTCACTGCACACT +
Preference number: 5 (lower is better)
Translates to: MRTWTTTPMTGRFRV*PGAGAGHWSISLHT
Trigger: AGTGTGCAGTGAGATCGACCAGTGGCCGGCGCCTGCACCTGGGCAGACCCTGAACCTACCTGTCATGGGCGTTGTTGTCCAGGTGCGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413817.8
ENST00000433760.1
ENST00000471942.6
CDS GCA 90 bp GCTCTCACCTGGACAACAACGCCCATGACAGGTAGGTTCAGGGTCTaGCCAGGTGCAGGCGCCGGCCACTGGTCGATCTCACTGCACACT +
Preference number: 5 (lower is better)
Translates to: ALTWTTTPMTGRFRV*PGAGAGHWSISLHT
Trigger: AGTGTGCAGTGAGATCGACCAGTGGCCGGCGCCTGCACCTGGGCAGACCCTGAACCTACCTGTCATGGGCGTTGTTGTCCAGGTGAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495607.5
CDS-3UTR CAA 90 bp GGTCAGGCCGAAGTCCAGAGCCCCTTGGGCTGCATGTGGGGGATGGACGGACACTGGCAGCAGGTTCTCTaGGTCAAACTGCTTCGGAGG +
Preference number: 5 (lower is better)
Translates to: GQAEVQSPLGCMWGMDGHWQQVL*VKLLRR
Trigger: CCTCCGAAGCAGTTTGACCAAGAGAACCTGCTGCCA...GTGTCCGTCCATCCCCCACATGCAGCCCAAGGGGCTCTGGACTTCGGCCTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS CCA 90 bp CTGGGGCTGGCAGCAGGTTCTCTTGGTCAAACTGCTTCGGAGGACTaGACTCGGACTTGTCCACCCTGGATGGGATGCGCACCTGGGAGA +
Preference number: 5 (lower is better)
Translates to: LGLAAGSLGQTASED*TRTCPPWMGCAPGR
Trigger: TCTCCCAGGTGCGCATCCCATCCAGGGTGGACAAGTCCGAGTCCAGTCCTCCGAAGCAGTTTGACCAAGAGAACCTGCTGCCAGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495607.5
CDS-3UTR CAA 90 bp AGGCCAGGTGGGACCCAGGAGGAGGCAAGGCTCTGCCTGCGAGGAACCCCTATGATGCTGCTTTTCTCCTaGTCTGTGAGCCGGAAGTCG +
Preference number: 5 (lower is better)
Translates to: RPGGTQEEARLCLRGTPMMLLFS*SVSRKS
Trigger: CGACTTCCGGCTCACAGACAAGGAGAAAAGCAGCAT...CATAGGGGTTCCTCGCAGGCAGAGCCTTGCCTCCTCCTGGGTCCCACCTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CAA 90 bp CAGGGACAGGCTGTCCTGGGCTGCAGTTGGGCTGGACAAGTTGACATGTACCAAAGGCAGGGCGCCAGCTaGTCAAAGTACTCGGGGGCG +
Preference number: 5 (lower is better)
Translates to: QGQAVLGCSWAGQVDMYQRQGAS*SKYSGA
Trigger: CGCCCCCGAGTACTTTGACAAGCTGGCGCCCTGCCT...TTGGTACATGTCAACTTGTCCAGCCCAACTGCAGCCCAGGACAGCCTGTCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CAA 90 bp GAGACATGCAGGCTCCAGCCAGAGGCAGGGTCAGGCCGAAGTCCAGAGCCCCTTCATGTGGTCACATCCTaGGACCCTGCACCAGACATC +
Preference number: 5 (lower is better)
Translates to: ETCRLQPEAGSGRSPEPLHVVTS*DPAPDI
Trigger: GATGTCTGGTGCAGGGTCCAAGGATGTGACCACATG...AAGGGGCTCTGGACTTCGGCCTGACCCTGCCTCTGGCTGGAGCCTGCATGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS CCA 90 bp GCCAGCTTGTCAAAGTACTCGGGGGCGATGAGGCTTAGCAGCGCTTaGAACAGCCGGACAAAGGGCAAGCGGGACACCAGCACCAAAGAC +
Preference number: 5 (lower is better)
Translates to: ASLSKYSGAMRLSSA*NSRTKGKRDTSTKD
Trigger: GTCTTTGGTGCTGGTGTCCCGCTTGCCCTTTGTCCGGCTGTTCCAAGCGCTGCTAAGCCTCATCGCCCCCGAGTACTTTGACAAGCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413817.8
ENST00000433760.1
ENST00000471942.6
ENST00000495607.5
CDS CCA 90 bp CTGGGGCTGGCAGCAGGTTCTCTTGGTCAAACTGCTTCGGAGGACTaGACTCGGACTTGTCCACCCTGGATGGGATGCGCACCTGGACAA +
Preference number: 5 (lower is better)
Translates to: LGLAAGSLGQTASED*TRTCPPWMGCAPGQ
Trigger: TTGTCCAGGTGCGCATCCCATCCAGGGTGGACAAGTCCGAGTCCAGTCCTCCGAAGCAGTTTGACCAAGAGAACCTGCTGCCAGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413817.8
ENST00000433760.1
ENST00000471942.6
CDS-3UTR CAA 90 bp AATCTGCTTGTGCATTTCTGGATACACAGTGGCCAGGGTCCCTGGGGGCTCCTCAGGTCTCCTGACATCTaGGGCTCCCCGACTCGGAGG +
Preference number: 5 (lower is better)
Translates to: NLLVHFWIHSGQGPWGLLRSPDI*GSPTRR
Trigger: CCTCCGAGTCGGGGAGCCCAAGATGTCAGGAGACCT...GAGGAGCCCCCAGGGACCCTGGCCACTGTGTATCCAGAAATGCACAAGCAGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CAA 90 bp CAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACCTGGCTTTCTTCTGCACGCCCTaGAGCAGCCGTTTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: QSHPALKWLAVLALHHLAFFCTP*SSRLSS
Trigger: GCTGCTCAAACGGCTGCTCAAGGGCGTGCAGAAGAA...AGCCAGGTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CAA 90 bp GTGGCTCAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACAGGCCCAAGCTGCATTaGGGGCCAGGACCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: VAQSHPALKWLAVLALHHRPKLH*GPGPFS
Trigger: TGAGAAAGGTCCTGGCCCCAAATGCAGCTTGGGCCT...GTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTGAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CAA 90 bp CAGGGACAGGCTGTCCTGGGCTGCAGTTGGGCTGGACAAGTTGACATGTACCAAAGCTGCCCCGACACCTaGAAGTGGTGGTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: QGQAVLGCSWAGQVDMYQSCPDT*KWWSSG
Trigger: CCCTGAGGACCACCACTTCAAGGTGTCGGGGCAGCT...TTGGTACATGTCAACTTGTCCAGCCCAACTGCAGCCCAGGACAGCCTGTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CAA 90 bp GGCCATGCTGTGGTTCCAAATGTCGCCTTTACTGCTGAGACAATGGTGGTGCAGCCCAGCCAGTCGCCCTaGAGGATGCAGGTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: GHAVVPNVAFTAETMVVQPSQSP*RMQVSW
Trigger: CCAGCTCACCTGCATCCTCAAGGGCGACTGGCTGGG...CTGCACCACCATTGTCTCAGCAGTAAAGGCGACATTTGGAACCACAGCATGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CAA 90 bp AGGTGGCTCTTAGGGACGTTCACCCCTTACCAAGGAAAGGGAGACATGCAGGCTTTCAGGGCCATCTCCTaGTGCCGCTGCCGGTACCAG +
Preference number: 5 (lower is better)
Translates to: RWLLGTFTPYQGKGDMQAFRAIS*CRCRYQ
Trigger: CTGGTACCGGCAGCGGCACAAGGAGATGGCCCTGAA...AGCCTGCATGTCTCCCTTTCCTTGGTAAGGGGTGAACGTCCCTAAGAGCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CAA 90 bp AATCTGCTTGTGCATTTCTGGATACACAGTGGCCAGGGTCCCTGGGGGCTCCTCCTGACCCCGCTGTCCTaGTGGCTCAGTCACATCCTG +
Preference number: 5 (lower is better)
Translates to: NLLVHFWIHSGQGPWGLLLTPLS*WLSHIL
Trigger: CAGGATGTGACTGAGCCACAAGGACAGCGGGGTCAG...GAGGAGCCCCCAGGGACCCTGGCCACTGTGTATCCAGAAATGCACAAGCAGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CAA 90 bp GTACCAAGTTCTGAGAACTACCTGGCGCCCGGACACCTGACCCCGCTGTCCTTGTGCCACAGAACAGGTTaGCCACCTCGGCCTCTATGT +
Preference number: 5 (lower is better)
Translates to: VPSSENYLAPGHLTPLSLCHRTG*PPRPLC
Trigger: ACATAGAGGCCGAGGTGGCAAACCTGTTCTGTGGCA...CAAGGACAGCGGGGTCAGGTGTCCGGGCGCCAGGTAGTTCTCAGAACTTGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS TCA 90 bp AAGTCGTTCGGATACACCAGCTGCAGAGGAAGACAGAGTGCTTGGTaGCACCATCTGTCCGAGGAGGCGACACCCCTCGACAGCATCTGC +
Preference number: 5 (lower is better)
Translates to: KSFGYTSCRGRQSAW*HHLSEEATPLDSIC
Trigger: GCAGATGCTGTCGAGGGGTGTCGCCTCCTCGGACAGATGGTGTCACCAAGCACTCTGTCTTCCTCTGCAGCTGGTGTATCCGAACGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433760.1
CDS TCA 90 bp CCTTCTGGAAGTAGCCCCTCTTCACAGAGCTGTCCTTCACCTGCCTaGAGTACACGTAGCCGAAGTAGTGTGCCGGCTCCCTCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: PSGSSPSSQSCPSPA*STRSRSSVPAPSAV
Trigger: CACTGCAGAGGGAGCCGGCACACTACTTCGGCTACGTGTACTTCAGGCAGGTGAAGGACAGCTCTGTGAAGAGGGGCTACTTCCAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433760.1
ENST00000460087.1
ENST00000471942.6
CDS-3UTR CAA 90 bp CAGTCACATCCTGCACTGAAGTGGCTGGCAGTGCTCGCTCTCCACCACCTGGCTCGTGTGGTGAACTCCTaGAACTCGCTGTCATGGATG +
Preference number: 5 (lower is better)
Translates to: QSHPALKWLAVLALHHLARVVNS*NSLSWM
Trigger: CATCCATGACAGCGAGTTCAAGGAGTTCACCACACG...AGCCAGGTGGTGGAGAGCGAGCACTGCCAGCCACTTCAGTGCAGGATGTGACTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS TCA 90 bp ACTTCTGGAAGTAGCCCCTCTTCACAGAGCTGTCCTTCACCTGCCTaGAGTACACGTAGCCGAAGTAGTGTGCCGGCTCCCTCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: TSGSSPSSQSCPSPA*STRSRSSVPAPSAV
Trigger: CACTGCAGAGGGAGCCGGCACACTACTTCGGCTACGTGTACTTCAGGCAGGTGAAGGACAGCTCTGTGAAGAGGGGCTACTTCCAGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413817.8
ENST00000495607.5
CDS-3UTR CAA 90 bp GGGCACACAGTGCGTGATGCTGAGCAGGGCTTGGCTGTCCGGAGCCCTGACAGTTCCAGGGAAATCTGCTaGTGCATTTCTGGATACACA +
Preference number: 5 (lower is better)
Translates to: GHTVRDAEQGLAVRSPDSSREIC*CISGYT
Trigger: TGTGTATCCAGAAATGCACAAGCAGATTTCCCTGGA...ACTGTCAGGGCTCCGGACAGCCAAGCCCTGCTCAGCATCACGCACTGTGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CAA 90 bp GGCCATGCTGTGGTTCCAAATGTCGCCTTTACTGCTGAGACAATGGTGGTGCAGGATGGACGGACACACTaGGACAACAGGAGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: GHAVVPNVAFTAETMVVQDGRTH*DNRSPV
Trigger: GACAGGGCTCCTGTTGTCCAAGTGTGTCCGTCCATC...CTGCACCACCATTGTCTCAGCAGTAAAGGCGACATTTGGAACCACAGCATGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CAA 90 bp GGCCATGCTGTGGTTCCAAATGTCGCCTTTACTGCTGAGACAATGGTGGTGCAGACCTCCACCTCGGACTaGTCTTTCATCCAGGTCTCG +
Preference number: 5 (lower is better)
Translates to: GHAVVPNVAFTAETMVVQTSTSD*SFIQVS
Trigger: CGAGACCTGGATGAAAGACAAGTCCGAGGTGGAGGT...CTGCACCACCATTGTCTCAGCAGTAAAGGCGACATTTGGAACCACAGCATGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS-3UTR CAA 90 bp CTGAATGAAGGCTACATTCCTCGGACTGAATGGGGGCCTCAGAAGAAAAAGAAATGTGAGAGAGGTGGGTaGTCTTCCCAAGCTGCCCCG +
Preference number: 5 (lower is better)
Translates to: LNEGYIPRTEWGPQKKKKCERGG*SSQAAP
Trigger: CGGGGCAGCTTGGGAAGACAACCCACCTCTCTCACA...TTTCTTTTTCTTCTGAGGCCCCCATTCAGTCCGAGGAATGTAGCCTTCATTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000413817.8
CDS CCA 72 bp GCGGTGGAGGTGGGCCGTGTAAGCGGTGTAGAGGCCTaGCGGGAGGGCACAGCTGGCGCCCCACCCTTCAAG +
Preference number: 6 (lower is better)
Translates to: AVEVGRVSGVEA*REGTAGAPPFK
Trigger: CTTGAAGGGTGGGGCGCCAGCTGTGCCCTCCCGCCAGGCCTCTACACCGCTTACACGGCCCACCTCCACCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495607.5
CDS TCA 72 bp CAGGAGGTGCCGCCGCAGCAGGGCGCTCTGCACATCTaGCGGCCGCTTCTTCTGCACGCCCTTGAGCAGCCG +
Preference number: 6 (lower is better)
Translates to: QEVPPQQGALHI*RPLLLHALEQP
Trigger: CGGCTGCTCAAGGGCGTGCAGAAGAAGCGGCCGTCAGATGTGCAGAGCGCCCTGCTGCGGCGGCACCTCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413817.8
ENST00000495607.5
CDS CCA 72 bp CCAACACTGAACTCCCTGGGTGGCGGCCGGTGGGGCTaGACCCTAGGGCCTTCGGAGGGAAACGCACGGTGG +
Preference number: 6 (lower is better)
Translates to: PTLNSLGGGRWG*TLGPSEGNARW
Trigger: CCACCGTGCGTTTCCCTCCGAAGGCCCTAGGGTCCAGCCCCACCGGCCGCCACCCAGGGAGTTCAGTGTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460087.1
CDS GCA 72 bp GTGAGCTCCAGGAGGTGCCGCCGCAGCAGGGCGCTCTaGACATCTGACGGCCGCTTCTTCTGCACGCCCTTG +
Preference number: 6 (lower is better)
Translates to: VSSRRCRRSRAL*TSDGRFFCTPL
Trigger: CAAGGGCGTGCAGAAGAAGCGGCCGTCAGATGTGCAGAGCGCCCTGCTGCGGCGGCACCTCCTGGAGCTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413817.8
ENST00000495607.5
CDS CCA 72 bp AGGTTCAGGGTCTGCCCAGGTGCAGGCGCCGGCCACTaGTCGATCTCACTGCACACTGCTTCCAGGCAGGGC +
Preference number: 6 (lower is better)
Translates to: RFRVCPGAGAGH*SISLHTASRQG
Trigger: GCCCTGCCTGGAAGCAGTGTGCAGTGAGATCGACCAGTGGCCGGCGCCTGCACCTGGGCAGACCCTGAACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413817.8
ENST00000433760.1
ENST00000471942.6
CDS GCA 72 bp GAGCCGATGACCGTCTCGATGTACAGCTGTGCCCGCTaGAGCGTAGCCTCCTTCACAGGGAGCTGGTGGCCC +
Preference number: 6 (lower is better)
Translates to: EPMTVSMYSCAR*SVASFTGSWWP
Trigger: GGGCCACCAGCTCCCTGTGAAGGAGGCTACGCTGCAGCGGGCACAGCTGTACATCGAGACGGTCATCGGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413817.8
ENST00000495607.5
CDS GCA 72 bp GGGCAGGGAGCCGATGACCGTCTCGATGTACAGCTGTaGCCGCTGCAGCGTAGCCTCCTTCACAGGGAGCTG +
Preference number: 6 (lower is better)
Translates to: GQGADDRLDVQL*PLQRSLLHREL
Trigger: CAGCTCCCTGTGAAGGAGGCTACGCTGCAGCGGGCACAGCTGTACATCGAGACGGTCATCGGCTCCCTGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413817.8
ENST00000495607.5
CDS GCA 72 bp TGCAGGCGCCGGCCACTGGTCGATCTCACTGCACACTaGGGATGCAGTAGCCCGCATCAGGACCCTCCCCAA +
Preference number: 6 (lower is better)
Translates to: CRRRPLVDLTAH*GCSSPHQDPPQ
Trigger: TTGGGGAGGGTCCTGATGCGGGCTACTGCATCCGCAGTGTGCAGTGAGATCGACCAGTGGCCGGCGCCTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495607.5
CDS CCA 72 bp CCAACACTGAACTCCCTGGGTGGCGGCCGGTGGGGCTaGACCCTAGGGCCTTCTGGAAGTAGCCCCTCTTCA +
Preference number: 6 (lower is better)
Translates to: PTLNSLGGGRWG*TLGPSGSSPSS
Trigger: TGAAGAGGGGCTACTTCCAGAAGGCCCTAGGGTCCAGCCCCACCGGCCGCCACCCAGGGAGTTCAGTGTTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433760.1
CDS CCA 72 bp GAAAACCCAACACTGAACTCCCTGGGTGGCGGCCGGTaGGGCTGGACCCTAGGGCCTTCTGGAAGTAGCCCC +
Preference number: 6 (lower is better)
Translates to: ENPTLNSLGGGR*GWTLGPSGSSP
Trigger: GGGGCTACTTCCAGAAGGCCCTAGGGTCCAGCCCCACCGGCCGCCACCCAGGGAGTTCAGTGTTGGGTTTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433760.1
CDS CCA 72 bp GAAAACCCAACACTGAACTCCCTGGGTGGCGGCCGGTaGGGCTGGACCCTAGGGCCTTCGGAGGGAAACGCA +
Preference number: 6 (lower is better)
Translates to: ENPTLNSLGGGR*GWTLGPSEGNA
Trigger: TGCGTTTCCCTCCGAAGGCCCTAGGGTCCAGCCCCACCGGCCGCCACCCAGGGAGTTCAGTGTTGGGTTTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460087.1
CDS TCA 72 bp CCCTGGATGGGATGCGCACCTGGACAACAACGCCCATaGCAGGTAGGTTCAGGGTCTGCCCAGGTGCAGGCG +
Preference number: 6 (lower is better)
Translates to: PWMGCAPGQQRP*QVGSGSAQVQA
Trigger: CGCCTGCACCTGGGCAGACCCTGAACCTACCTGTCATGGGCGTTGTTGTCCAGGTGCGCATCCCATCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413817.8
ENST00000433760.1
ENST00000471942.6
CDS TCA 72 bp CCAGCCAGCTGGCTCTCACCTGGACAACAACGCCCATaGCAGGTAGGTTCAGGGTCTGCCCAGGTGCAGGCG +
Preference number: 6 (lower is better)
Translates to: PASWLSPGQQRP*QVGSGSAQVQA
Trigger: CGCCTGCACCTGGGCAGACCCTGAACCTACCTGTCATGGGCGTTGTTGTCCAGGTGAGAGCCAGCTGGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495607.5
CDS GCA 72 bp CGCCGGCCACTGGTCGATCTCACTGCACACTGCGGATaGAGTAGCCCGCATCAGGACCCTCCCCAAGGAGAA +
Preference number: 6 (lower is better)
Translates to: RRPLVDLTAHCG*SSPHQDPPQGE
Trigger: TTCTCCTTGGGGAGGGTCCTGATGCGGGCTACTGCATCCGCAGTGTGCAGTGAGATCGACCAGTGGCCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495607.5
CDS CCA 72 bp AGCACAGGCCGGAAGCACCTGAACAGGTCCAGCTCGTaGACGCTAGCAAGAACCACTGGGGCTGGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: STGRKHLNRSSS*TLARTTGAGSR
Trigger: CCTGCTGCCAGCCCCAGTGGTTCTTGCTAGCGTCCACGAGCTGGACCTGTTCAGGTGCTTCCGGCCTGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413817.8
ENST00000433760.1
ENST00000471942.6
ENST00000495607.5
CDS CCA 72 bp AGACCCAGCCAGTCGCCCTTGAGGATGCAGGTGAGCTaGGGCCCAGCATGCTCCAGGCTACGCAGGAAGTCA +
Preference number: 6 (lower is better)
Translates to: RPSQSPLRMQVS*GPACSRLRRKS
Trigger: TGACTTCCTGCGTAGCCTGGAGCATGCTGGGCCCCAGCTCACCTGCATCCTCAAGGGCGACTGGCTGGGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413817.8
ENST00000495607.5
CDS CCA 72 bp GCTCAGGCAGACCTAGGGCCCTGGGACCGTGGCCCTTaGCTTTGTTCTAGGGAGGGCACAAGACAGCCTGCA +
Preference number: 6 (lower is better)
Translates to: AQADLGPWDRGP*LCSREGTRQPA
Trigger: TGCAGGCTGTCTTGTGCCCTCCCTAGAACAAAGCCAAGGGCCACGGTCCCAGGGCCCTAGGTCTGCCTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413817.8
ENST00000495607.5
CDS CCA 72 bp GGCTGGACCCTAGGGCCTTCGGAGGGAAACGCACGGTaGCCAGAATTTCTAGAACGACCTCCCCAGGGGCTG +
Preference number: 6 (lower is better)
Translates to: GWTLGPSEGNAR*PEFLERPPQGL
Trigger: CAGCCCCTGGGGAGGTCGTTCTAGAAATTCTGGCCACCGTGCGTTTCCCTCCGAAGGCCCTAGGGTCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460087.1
CDS CCA 72 bp CTTCGGAGGACTGGACTCGGACTTGTCCACCCTGGATaGGATGCGCACCTGGGAGAAGGAGGGAGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: LRRTGLGLVHPG*DAHLGEGGSSC
Trigger: GCAGCTGCTCCCTCCTTCTCCCAGGTGCGCATCCCATCCAGGGTGGACAAGTCCGAGTCCAGTCCTCCGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495607.5
CDS TCA 72 bp CTCTGCCCTCCACACTGGCGCATGCGGAAGCTGAACTaGGTGTCTCCAAGGCAGCCTGAGTGCGAGTCGGGA +
Preference number: 6 (lower is better)
Translates to: LCPPHWRMRKLN*VSPRQPECESG
Trigger: TCCCGACTCGCACTCAGGCTGCCTTGGAGACACTCAGTTCAGCTTCCGCATGCGCCAGTGTGGAGGGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413817.8
ENST00000433760.1
ENST00000460087.1
ENST00000471942.6
ENST00000495607.5
CDS TCA 72 bp GGCTCCTCTGCCCTCCACACTGGCGCATGCGGAAGCTaGACTGAGTGTCTCCAAGGCAGCCTGAGTGCGAGT +
Preference number: 6 (lower is better)
Translates to: GSSALHTGACGS*TECLQGSLSAS
Trigger: ACTCGCACTCAGGCTGCCTTGGAGACACTCAGTTCAGCTTCCGCATGCGCCAGTGTGGAGGGCAGAGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413817.8
ENST00000433760.1
ENST00000460087.1
ENST00000471942.6
ENST00000495607.5
CDS TCA 72 bp GGCAGGGCGCCAGCTTGTCAAAGTACTCGGGGGCGATaGGGCTTAGCAGCGCTTGGAACAGCCGGACAAAGG +
Preference number: 6 (lower is better)
Translates to: GRAPACQSTRGR*GLAALGTAGQR
Trigger: CCTTTGTCCGGCTGTTCCAAGCGCTGCTAAGCCTCATCGCCCCCGAGTACTTTGACAAGCTGGCGCCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413817.8
ENST00000433760.1
ENST00000471942.6
ENST00000495607.5
CDS TCA 72 bp ACAAGACAGCCTGCAGGTCTTTGGGCAGGGAGCCGATaGCCGTCTCGATGTACAGCTGTGCCCGCTGCAGCG +
Preference number: 6 (lower is better)
Translates to: TRQPAGLWAGSR*PSRCTAVPAAA
Trigger: CGCTGCAGCGGGCACAGCTGTACATCGAGACGGTCATCGGCTCCCTGCCCAAAGACCTGCAGGCTGTCTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413817.8
ENST00000495607.5
CDS GCA 72 bp CTTCACCTGCCTGAAGTACACGTAGCCGAAGTAGTGTaGCGGCTCCCTCTGCAGTGCCACAGGGGCCCTGCT +
Preference number: 6 (lower is better)
Translates to: LHLPEVHVAEVV*RLPLQCHRGPA
Trigger: AGCAGGGCCCCTGTGGCACTGCAGAGGGAGCCGGCACACTACTTCGGCTACGTGTACTTCAGGCAGGTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413817.8
ENST00000433760.1
ENST00000460087.1
ENST00000471942.6
ENST00000495607.5
CDS CCA 72 bp ACTGCTTCGGAGGACTGGACTCGGACTTGTCCACCCTaGATGGGATGCGCACCTGGGAGAAGGAGGGAGCAG +
Preference number: 6 (lower is better)
Translates to: TASEDWTRTCPP*MGCAPGRRREQ
Trigger: CTGCTCCCTCCTTCTCCCAGGTGCGCATCCCATCCAGGGTGGACAAGTCCGAGTCCAGTCCTCCGAAGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495607.5
CDS CCA 72 bp TCAAAGTACTCGGGGGCGATGAGGCTTAGCAGCGCTTaGAACAGCCGGACAAAGGGCAAGCGGGACACCAGC +
Preference number: 6 (lower is better)
Translates to: SKYSGAMRLSSA*NSRTKGKRDTS
Trigger: GCTGGTGTCCCGCTTGCCCTTTGTCCGGCTGTTCCAAGCGCTGCTAAGCCTCATCGCCCCCGAGTACTTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000413817.8
ENST00000433760.1
ENST00000471942.6
ENST00000495607.5
CDS TCA 72 bp GGATACACCAGCTGCAGAGGAAGACAGAGTGCTTGGTaGCACCATCTGTCCGAGGAGGCGACACCCCTCGAC +
Preference number: 6 (lower is better)
Translates to: GYTSCRGRQSAW*HHLSEEATPLD
Trigger: GTCGAGGGGTGTCGCCTCCTCGGACAGATGGTGTCACCAAGCACTCTGTCTTCCTCTGCAGCTGGTGTATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433760.1
CDS CCA 72 bp GTCCAGCTCGTGGACGCTAGCAAGAACCACTGGGGCTaGCAGCAGGTTCTCTTGGTCAAACTGCTTCGGAGG +
Preference number: 6 (lower is better)
Translates to: VQLVDASKNHWG*QQVLLVKLLRR
Trigger: CCTCCGAAGCAGTTTGACCAAGAGAACCTGCTGCCAGCCCCAGTGGTTCTTGCTAGCGTCCACGAGCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000413817.8
ENST00000433760.1
ENST00000471942.6
ENST00000495607.5
CDS CAA 72 bp ATCTCACTGCACACTGCTTCCAGGCAGGGCGCCAGCTaGTCAAAGTACTCGGGGGCGATGAGGCTTAGCAGC +
Preference number: 6 (lower is better)
Translates to: ISLHTASRQGAS*SKYSGAMRLSS
Trigger: GCTGCTAAGCCTCATCGCCCCCGAGTACTTTGACAAGCTGGCGCCCTGCCTGGAAGCAGTGTGCAGTGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000413817.8
ENST00000433760.1
ENST00000471942.6
CDS CAA 90 bp AGCAGGTTCTCTTGGTCAAACTGCTTCGGAGGACTGGACTCGGACTaGTCCACCCTGGATGGGATGCGCACCTGGGAGAAGGAGGGAGCA +
Preference number: 6 (lower is better)
Translates to: SRFSWSNCFGGLDSD*STLDGMRTWEKEGA
Trigger: TGCTCCCTCCTTCTCCCAGGTGCGCATCCCATCCAGGGTGGACAAGTCCGAGTCCAGTCCTCCGAAGCAGTTTGACCAAGAGAACCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495607.5
CDS CAA 90 bp AGCAGGTTCTCTTGGTCAAACTGCTTCGGAGGACTGGACTCGGACTaGTCCACCCTGGATGGGATGCGCACCTGGACAACAACGCCCATG +
Preference number: 6 (lower is better)
Translates to: SRFSWSNCFGGLDSD*STLDGMRTWTTTPM
Trigger: CATGGGCGTTGTTGTCCAGGTGCGCATCCCATCCAGGGTGGACAAGTCCGAGTCCAGTCCTCCGAAGCAGTTTGACCAAGAGAACCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413817.8
ENST00000433760.1
ENST00000471942.6
CDS TCA 72 bp AGTAGCCCCTCTTCACAGAGCTGTCCTTCACCTGCCTaGAGTACACGTAGCCGAAGTAGTGTGCCGGCTCCC +
Preference number: 6 (lower is better)
Translates to: SSPSSQSCPSPA*STRSRSSVPAP
Trigger: GGGAGCCGGCACACTACTTCGGCTACGTGTACTTCAGGCAGGTGAAGGACAGCTCTGTGAAGAGGGGCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413817.8
ENST00000433760.1
ENST00000460087.1
ENST00000471942.6
ENST00000495607.5
CDS CCA 72 bp GCAGCAGGTTCTCTTGGTCAAACTGCTTCGGAGGACTaGACTCGGACTTGTCCACCCTGGATGGGATGCGCA +
Preference number: 6 (lower is better)
Translates to: AAGSLGQTASED*TRTCPPWMGCA
Trigger: TGCGCATCCCATCCAGGGTGGACAAGTCCGAGTCCAGTCCTCCGAAGCAGTTTGACCAAGAGAACCTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413817.8
ENST00000433760.1
ENST00000471942.6
ENST00000495607.5
CDS CAA 72 bp TCTTGGTCAAACTGCTTCGGAGGACTGGACTCGGACTaGTCCACCCTGGATGGGATGCGCACCTGGGAGAAG +
Preference number: 6 (lower is better)
Translates to: SWSNCFGGLDSD*STLDGMRTWEK
Trigger: CTTCTCCCAGGTGCGCATCCCATCCAGGGTGGACAAGTCCGAGTCCAGTCCTCCGAAGCAGTTTGACCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495607.5
CDS CAA 72 bp TCTTGGTCAAACTGCTTCGGAGGACTGGACTCGGACTaGTCCACCCTGGATGGGATGCGCACCTGGACAACA +
Preference number: 6 (lower is better)
Translates to: SWSNCFGGLDSD*STLDGMRTWTT
Trigger: TGTTGTCCAGGTGCGCATCCCATCCAGGGTGGACAAGTCCGAGTCCAGTCCTCCGAAGCAGTTTGACCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413817.8
ENST00000433760.1
ENST00000471942.6
CDS GCA 72 bp AGCTTTTACTCTCTGCCTATGGCTTCCAGGCTGGGTTaGCCTGACACTGACAGTGTGATGACCCTCCAGCCA +
Preference number: 6 (lower is better)
Translates to: SFYSLPMASRLG*PDTDSVMTLQP
Trigger: TGGCTGGAGGGTCATCACACTGTCAGTGTCAGGGCAACCCAGCCTGGAAGCCATAGGCAGAGAGTAAAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460087.1
CDS CAA 72 bp AGTTTCAGGACCAGGTCCACGACCTCCACCTCGGACTaGTCTTTCATCCAGGTCTCGATGTTCGCCTCACAG +
Preference number: 6 (lower is better)
Translates to: SFRTRSTTSTSD*SFIQVSMFASQ
Trigger: CTGTGAGGCGAACATCGAGACCTGGATGAAAGACAAGTCCGAGGTGGAGGTCGTGGACCTGGTCCTGAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413817.8
ENST00000495607.5
CDS CAA 90 bp CCTGGCTTGGTGTCCAGGGTCTTCAACCTTGAAGGCTTTTTCAGCTaGACTTGCTTAGGCAGGTCTCCTGACATCTTGGGCTCCCCGACT +
Preference number: 6 (lower is better)
Translates to: PGLVSRVFNLEGFFS*TCLGRSPDILGSPT
Trigger: AGTCGGGGAGCCCAAGATGTCAGGAGACCTGCCTAAGCAAGTCAAGCTGAAAAAGCCTTCAAGGTTGAAGACCCTGGACACCAAGCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000413817.8
ENST00000471942.6
ENST00000495607.5
CDS CAA 90 bp TTCTCACGAAGTTTCAGGACCAGGTCCACGACCTCCACCTCGGACTaGTCTTTCATCCAGGTCTCGATGTTCGCCTCACAGATAGCCTCC +
Preference number: 6 (lower is better)
Translates to: FSRSFRTRSTTSTSD*SFIQVSMFASQIAS
Trigger: GGAGGCTATCTGTGAGGCGAACATCGAGACCTGGATGAAAGACAAGTCCGAGGTGGAGGTCGTGGACCTGGTCCTGAAACTTCGTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413817.8
ENST00000495607.5