Pregenerated sensors for DENND6A-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000241933Ensembl transcript IDs: ENST00000465933.1
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAGGCTGGAGTGCAATGGCTGTTCGCAGGCGCGATCATAGCGCGCTaGAGCCTGGAACTCCTGCTCAAGCGATCCTCCTTGAACTTAGCC | + |
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Preference number: 5 (lower is better) Translates to: QAGVQWLFAGAIIAR*SLELLLKRSSLNLA Trigger: GGCTAAGTTCAAGGAGGATCGCTTGAGCAGGAGTTCCAGGCTGCAGCGCGCTATGATCGCGCCTGCGAACAGCCATTGCACTCCAGCCTG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS CCA 90 bp | GAGACCAGGCCCTTGCCCCAGTGTTCAGAGATCCACAGGTTGCTGTaGAGGCCAATCTGCCCAACCTGGAGTTCCAGAAAGGTCTGGGGA | + |
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Preference number: 5 (lower is better) Translates to: ETRPLPQCSEIHRLL*RPICPTWSSRKVWG Trigger: TCCCCAGACCTTTCTGGAACTCCAGGTTGGGCAGATTGGCCTCCACAGCAACCTGTGGATCTCTGAACACTGGGGCAAGGGCCTGGTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS GCA 90 bp | TGCTTGAGACCAGGCCCTTGCCCCAGTGTTCAGAGATCCACAGGTTaGTGTGGAGGCCAATCTGCCCAACCTGGAGTTCCAGAAAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: CLRPGPCPSVQRSTG*CGGQSAQPGVPERS Trigger: AGACCTTTCTGGAACTCCAGGTTGGGCAGATTGGCCTCCACAGCAACCTGTGGATCTCTGAACACTGGGGCAAGGGCCTGGTCTCAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS CCA 90 bp | TGTTCAGAGATCCACAGGTTGCTGTGGAGGCCAATCTGCCCAACCTaGAGTTCCAGAAAGGTCTGGGGATGTGTGTTGAGTGAGTCACAG | + |
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Preference number: 5 (lower is better) Translates to: CSEIHRLLWRPICPT*SSRKVWGCVLSESQ Trigger: CTGTGACTCACTCAACACACATCCCCAGACCTTTCTGGAACTCCAGGTTGGGCAGATTGGCCTCCACAGCAACCTGTGGATCTCTGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS GCA 90 bp | GTAAAAACTGATCTCAGAATACGAAGCTGCTTGAGACCAGGCCCTTaGCCCAGTGTTCAGAGATCCACAGGTTGCTGTGGAGGCCAATCT | + |
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Preference number: 5 (lower is better) Translates to: VKTDLRIRSCLRPGP*PSVQRSTGCCGGQS Trigger: AGATTGGCCTCCACAGCAACCTGTGGATCTCTGAACACTGGGGCAAGGGCCTGGTCTCAAGCAGCTTCGTATTCTGAGATCAGTTTTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS GCA 90 bp | TGGCTGGTCCAATACTCAGTAAAAACTGATCTCAGAATACGAAGCTaGTTGAGACCAGGCCCTTGCCCCAGTGTTCAGAGATCCACAGGT | + |
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Preference number: 5 (lower is better) Translates to: WLVQYSVKTDLRIRS*LRPGPCPSVQRSTG Trigger: ACCTGTGGATCTCTGAACACTGGGGCAAGGGCCTGGTCTCAAGCAGCTTCGTATTCTGAGATCAGTTTTTACTGAGTATTGGACCAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS TCA 90 bp | GAACTTAGCCGGCCTCAGCTTCCCAAGAACCTGGGACTACAGGCGTaGCACCTCGCTGGTTTACTCATTTTTCTGTTGAGGTATTATTGT | + |
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Preference number: 5 (lower is better) Translates to: ELSRPQLPKNLGLQA*HLAGLLIFLLRYYC Trigger: ACAATAATACCTCAACAGAAAAATGAGTAAACCAGCGAGGTGTCACGCCTGTAGTCCCAGGTTCTTGGGAAGCTGAGGCCGGCTAAGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS CCA 90 bp | GCCTCAGCTTCCCAAGAACCTGGGACTACAGGCGTGACACCTCGCTaGTTTACTCATTTTTCTGTTGAGGTATTATTGTGTGTTTCCTAC | + |
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Preference number: 5 (lower is better) Translates to: ASASQEPGTTGVTPR*FTHFSVEVLLCVSY Trigger: GTAGGAAACACACAATAATACCTCAACAGAAAAATGAGTAAACCAGCGAGGTGTCACGCCTGTAGTCCCAGGTTCTTGGGAAGCTGAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS TCA 90 bp | ATTCCACGAATAATTTATTCCCTGGTCGTTGACTGCGAACGAGGTTaGCAAGGATTCATAAACAGCCATTTCAGTCCCAAAGAGCTTTTA | + |
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Preference number: 5 (lower is better) Translates to: IPRIIYSLVVDCERG*QGFINSHFSPKELL Trigger: TAAAAGCTCTTTGGGACTGAAATGGCTGTTTATGAATCCTTGTCAACCTCGTTCGCAGTCAACGACCAGGGAATAAATTATTCGTGGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS TCA 90 bp | AATTATGAACTGTGTCATTCCACGAATAATTTATTCCCTGGTCGTTaGCTGCGAACGAGGTTGACAAGGATTCATAAACAGCCATTTCAG | + |
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Preference number: 5 (lower is better) Translates to: NYELCHSTNNLFPGR*LRTRLTRIHKQPFQ Trigger: CTGAAATGGCTGTTTATGAATCCTTGTCAACCTCGTTCGCAGTCAACGACCAGGGAATAAATTATTCGTGGAATGACACAGTTCATAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS GCA 72 bp | GTGCAATGGCTGTTCGCAGGCGCGATCATAGCGCGCTaGAGCCTGGAACTCCTGCTCAAGCGATCCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: VQWLFAGAIIAR*SLELLLKRSSL Trigger: CAAGGAGGATCGCTTGAGCAGGAGTTCCAGGCTGCAGCGCGCTATGATCGCGCCTGCGAACAGCCATTGCAC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS GCA 72 bp | CCAGGCCCTTGCCCCAGTGTTCAGAGATCCACAGGTTaGTGTGGAGGCCAATCTGCCCAACCTGGAGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: PGPCPSVQRSTG*CGGQSAQPGVP Trigger: TGGAACTCCAGGTTGGGCAGATTGGCCTCCACAGCAACCTGTGGATCTCTGAACACTGGGGCAAGGGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS CAA 72 bp | ACCAGGCCCTTGCCCCAGTGTTCAGAGATCCACAGGTaGCTGTGGAGGCCAATCTGCCCAACCTGGAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: TRPLPQCSEIHR*LWRPICPTWSS Trigger: GGAACTCCAGGTTGGGCAGATTGGCCTCCACAGCAACCTGTGGATCTCTGAACACTGGGGCAAGGGCCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS CAA 90 bp | CTGCTTGAGACCAGGCCCTTGCCCCAGTGTTCAGAGATCCACAGGTaGCTGTGGAGGCCAATCTGCCCAACCTGGAGTTCCAGAAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: LLETRPLPQCSEIHR*LWRPICPTWSSRKV Trigger: GACCTTTCTGGAACTCCAGGTTGGGCAGATTGGCCTCCACAGCAACCTGTGGATCTCTGAACACTGGGGCAAGGGCCTGGTCTCAAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS TCA 72 bp | CGGCCTCAGCTTCCCAAGAACCTGGGACTACAGGCGTaGCACCTCGCTGGTTTACTCATTTTTCTGTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: RPQLPKNLGLQA*HLAGLLIFLLR Trigger: CCTCAACAGAAAAATGAGTAAACCAGCGAGGTGTCACGCCTGTAGTCCCAGGTTCTTGGGAAGCTGAGGCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS GCA 72 bp | GATCTCAGAATACGAAGCTGCTTGAGACCAGGCCCTTaGCCCAGTGTTCAGAGATCCACAGGTTGCTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: DLRIRSCLRPGP*PSVQRSTGCCG Trigger: TCCACAGCAACCTGTGGATCTCTGAACACTGGGGCAAGGGCCTGGTCTCAAGCAGCTTCGTATTCTGAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS CCA 72 bp | ATCCACAGGTTGCTGTGGAGGCCAATCTGCCCAACCTaGAGTTCCAGAAAGGTCTGGGGATGTGTGTTGAGT | + |
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Preference number: 6 (lower is better) Translates to: IHRLLWRPICPT*SSRKVWGCVLS Trigger: ACTCAACACACATCCCCAGACCTTTCTGGAACTCCAGGTTGGGCAGATTGGCCTCCACAGCAACCTGTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS CAA 90 bp | CTGGTCCAATACTCAGTAAAAACTGATCTCAGAATACGAAGCTGCTaGAGACCAGGCCCTTGCCCCAGTGTTCAGAGATCCACAGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: LVQYSVKTDLRIRSC*RPGPCPSVQRSTGC Trigger: GCAACCTGTGGATCTCTGAACACTGGGGCAAGGGCCTGGTCTCAAGCAGCTTCGTATTCTGAGATCAGTTTTTACTGAGTATTGGACCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS CAA 72 bp | CACTCTCATTTACCAGAAACTGGGTTTTGGAGCAGCTaGCCTACCACGATCGTGGTAGATTCTAGCTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: HSHLPETGFWSS*PTTIVVDSSWH Trigger: GTGCCAGCTAGAATCTACCACGATCGTGGTAGGCAAGCTGCTCCAAAACCCAGTTTCTGGTAAATGAGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS GCA 72 bp | CAATACTCAGTAAAAACTGATCTCAGAATACGAAGCTaGTTGAGACCAGGCCCTTGCCCCAGTGTTCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: QYSVKTDLRIRS*LRPGPCPSVQR Trigger: TCTCTGAACACTGGGGCAAGGGCCTGGTCTCAAGCAGCTTCGTATTCTGAGATCAGTTTTTACTGAGTATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS CAA 72 bp | TCTCCAGCAAACGTCACTACTGATGTCTGTGCATACTaGACCACCTCCTTGAAAACAGGGACGCTAACACTT | + |
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Preference number: 6 (lower is better) Translates to: SPANVTTDVCAY*TTSLKTGTLTL Trigger: AAGTGTTAGCGTCCCTGTTTTCAAGGAGGTGGTCAAGTATGCACAGACATCAGTAGTGACGTTTGCTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS CAA 72 bp | TCTGGAGTAGGATGGCAGGCTACTTTGGCCAAAGACTaGGCCTCTAACTTAAGTGCTGTCCCTAAGTTCATT | + |
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Preference number: 6 (lower is better) Translates to: SGVGWQATLAKD*ASNLSAVPKFI Trigger: AATGAACTTAGGGACAGCACTTAAGTTAGAGGCCAAGTCTTTGGCCAAAGTAGCCTGCCATCCTACTCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS CCA 72 bp | TCCCAAGAACCTGGGACTACAGGCGTGACACCTCGCTaGTTTACTCATTTTTCTGTTGAGGTATTATTGTGT | + |
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Preference number: 6 (lower is better) Translates to: SQEPGTTGVTPR*FTHFSVEVLLC Trigger: ACACAATAATACCTCAACAGAAAAATGAGTAAACCAGCGAGGTGTCACGCCTGTAGTCCCAGGTTCTTGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS CAA 90 bp | GGAGAGATGATCCTATCCAAGATCCTTTCAGAGTCAAAGGTTCTTTaGATGAACCATAAGAAGGTGTCAGTACCTTGTTCCTCAGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: GEMILSKILSESKVL*MNHKKVSVPCSSAP Trigger: GGGAGCTGAGGAACAAGGTACTGACACCTTCTTATGGTTCATCAAAAGAACCTTTGACTCTGAAAGGATCTTGGATAGGATCATCTCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS TCA 72 bp | CTGTGTCATTCCACGAATAATTTATTCCCTGGTCGTTaGCTGCGAACGAGGTTGACAAGGATTCATAAACAG | + |
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Preference number: 6 (lower is better) Translates to: LCHSTNNLFPGR*LRTRLTRIHKQ Trigger: CTGTTTATGAATCCTTGTCAACCTCGTTCGCAGTCAACGACCAGGGAATAAATTATTCGTGGAATGACACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS TCA 72 bp | TTTTGTCTAAAGGAAGTCTCCAGCAAACGTCACTACTaGTGTCTGTGCATACTTGACCACCTCCTTGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: FCLKEVSSKRHY*CLCILDHLLEN Trigger: GTTTTCAAGGAGGTGGTCAAGTATGCACAGACATCAGTAGTGACGTTTGCTGGAGACTTCCTTTAGACAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS CAA 72 bp | GTTACGAAGGTAGAGGGAAATAAAGCCATAGCTGCTTaGTTTACCCTAGTGGTTATTCTGTTTCTGTGTATA | + |
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Preference number: 6 (lower is better) Translates to: VTKVEGNKAIAA*FTLVVILFLCI Trigger: TATACACAGAAACAGAATAACCACTAGGGTAAACAAAGCAGCTATGGCTTTATTTCCCTCTACCTTCGTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS CAA 72 bp | TACTGTTCTTTCCTAATACTGGGTTTAGAGCCTTACTaGATCGCAGAATACAGTTTTTCCTCTTTTAACCAC | + |
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Preference number: 6 (lower is better) Translates to: YCSFLILGLEPY*IAEYSFSSFNH Trigger: GTGGTTAAAAGAGGAAAAACTGTATTCTGCGATCAAGTAAGGCTCTAAACCCAGTATTAGGAAAGAACAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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| CDS CAA 72 bp | GGCTCTCCTAATATGTTGTTTTCAGGGTACTGTATTTaGACAAGATCATCCTTAACCCAATATTATAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: GSPNMLFSGYCI*TRSSLTQYYKA Trigger: TGCTTTATAATATTGGGTTAAGGATGATCTTGTCAAAATACAGTACCCTGAAAACAACATATTAGGAGAGCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465933.1 |
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