RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DENND4C (Homo sapiens)

Ensembl gene IDs: ENSG00000137145

Ensembl transcript IDs: ENST00000361024.6, ENST00000380424.1, ENST00000380427.5, ENST00000380437.8, ENST00000434457.7, ENST00000494124.2, ENST00000602442.1, ENST00000602708.1, ENST00000602925.5

Found 845 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTACATCTCCACTACTGCTGCTACTGCCAAGACTTGTGTTGCTCTaGGTAAGTTCACTGGGGACCAACCCTGAGATACTTGTGTTAGGC +
Preference number: 1 (lower is better)
Translates to: PTSPLLLLLPRLVLL*VSSLGTNPEILVLG
Trigger: GCCTAACACAAGTATCTCAGGGTTGGTCCCCAGTGAACTTACCCAGAGCAACACAAGTCTTGGCAGTAGCAGCAGTAGTGGAGATGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR TCA 90 bp CCATGCAGGAGGTTCAGTAGGACTGTGAGGCTCTGGACTAGGTTGTaGATGTTTTGCCACAATAGCAGAGGCATCACACACCTCTTCTGT +
Preference number: 1 (lower is better)
Translates to: PCRRFSRTVRLWTRL*MFCHNSRGITHLFC
Trigger: ACAGAAGAGGTGTGTGATGCCTCTGCTATTGTGGCAAAACATTCACAACCTAGTCCAGAGCCTCACAGTCCTACTGAACCTCCTGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR GCA 90 bp GATATTGAGGAGACCTGTGACCTTTGCACAGTCTTTTTAAGCGGCTaGCTAAACTGTGCCAAGCCACGTACCACATTCCGTACCTTCGTC +
Preference number: 1 (lower is better)
Translates to: DIEETCDLCTVFLSG*LNCAKPRTTFRTFV
Trigger: GACGAAGGTACGGAATGTGGTACGTGGCTTGGCACAGTTTAGGCAGCCGCTTAAAAAGACTGTGCAAAGGTCACAGGTCTCCTCAATATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR TCA 90 bp TCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCTATTTAAATaGGAGGCGCTCCAAAACACTTCCTGCACCACTCGACACTGGCAC +
Preference number: 1 (lower is better)
Translates to: SPSLVCQHSSESLFK*EALQNTSCTTRHWH
Trigger: GTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAATGTTGACACACAAGGCTTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
3UTR TCA 90 bp GGCGAAGAACGCACCAGTGCTGACAAAGAAGTTGAACGTTCTTTATaGGTTCGAGAGGGGGTTTGCTGCTTGAAACGCCCAGTAAAAGTT +
Preference number: 1 (lower is better)
Translates to: GEERTSADKEVERSL*VREGVCCLKRPVKV
Trigger: AACTTTTACTGGGCGTTTCAAGCAGCAAACCCCCTCTCGAACTCATAAAGAACGTTCAACTTCTTTGTCAGCACTGGTGCGTTCTTCGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR CCA 90 bp CATCTGAGTAGCTGTAGGCAGACGCAACAGCTACCCACATCTTACTaGCTACTGTCGCTGCTTGTTTCATACCAGATTTCAGGACATCTA +
Preference number: 1 (lower is better)
Translates to: HLSSCRQTQQLPTSY*LLSLLVSYQISGHL
Trigger: TAGATGTCCTGAAATCTGGTATGAAACAAGCAGCGACAGTAGCCAGTAAGATGTGGGTAGCTGTTGCGTCTGCCTACAGCTACTCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR CCA 90 bp GGAGTACTAGAGGACTCAAGTAGGGCACAGAAACAGGGGGAGGATTaGGTCTTTTTCCTAAAGGATCCACAACTTCCTGCAGACTATTTG +
Preference number: 1 (lower is better)
Translates to: GVLEDSSRAQKQGED*VFFLKDPQLPADYL
Trigger: CAAATAGTCTGCAGGAAGTTGTGGATCCTTTAGGAAAAAGACCCAATCCTCCCCCTGTTTCTGTGCCCTACTTGAGTCCTCTAGTACTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR GCA 90 bp AGTTCTTGGCTTTCCTCAAGCATCTCTGGCACCGGAGATGATCTGTaGTCAGGATTCCAAGTGCTTTCAGACATACAAGTCCTACTATCA +
Preference number: 1 (lower is better)
Translates to: SSWLSSSISGTGDDL*SGFQVLSDIQVLLS
Trigger: TGATAGTAGGACTTGTATGTCTGAAAGCACTTGGAATCCTGAGCACAGATCATCTCCGGTGCCAGAGATGCTTGAGGAAAGCCAAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR TCA 90 bp ACAACTTCCTGCAGACTATTTGGAAGACTAACTGTTGAGATGCCATaGAACGGTCGCTGGGTAAAGTCAATATTCTGCAATGGGCCTCCA +
Preference number: 1 (lower is better)
Translates to: TTSCRLFGRLTVEMP*NGRWVKSIFCNGPP
Trigger: TGGAGGCCCATTGCAGAATATTGACTTTACCCAGCGACCGTTTCATGGCATCTCAACAGTTAGTCTTCCAAATAGTCTGCAGGAAGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR TCA 90 bp GGTCGCTGGGTAAAGTCAATATTCTGCAATGGGCCTCCAACACTGTaGCTTCGAGTCAAAGACACATTTCGCTTTGATAAACTATTAGGC +
Preference number: 1 (lower is better)
Translates to: GRWVKSIFCNGPPTL*LRVKDTFRFDKLLG
Trigger: GCCTAATAGTTTATCAAAGCGAAATGTGTCTTTGACTCGAAGTCACAGTGTTGGAGGCCCATTGCAGAATATTGACTTTACCCAGCGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR GCA 90 bp TTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTCTaGAACCTTTCAAGAATCTCTGAAGACAGACTATTGTATGCAATT +
Preference number: 1 (lower is better)
Translates to: FLHHSTLALGGASIF*NLSRISEDRLLYAI
Trigger: AATTGCATACAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
3UTR CCA 90 bp CACTACTCGATAGCACACCTGTTTAGTTCTCTTAGCCATGAGAGGTaGACTCTTTGTAATGCTATTCCCAGTAGGGTGTCTACTAAAACA +
Preference number: 1 (lower is better)
Translates to: HYSIAHLFSSLSHER*TLCNAIPSRVSTKT
Trigger: TGTTTTAGTAGACACCCTACTGGGAATAGCATTACAAAGAGTCCACCTCTCATGGCTAAGAGAACTAAACAGGTGTGCTATCGAGTAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR CCA 90 bp CTACTGTCGCTGCTTGTTTCATACCAGATTTCAGGACATCTATCTTaGGCCCTGAGAGTATATTATCCAGCTTTAGCCCTGACAAAGAAT +
Preference number: 1 (lower is better)
Translates to: LLSLLVSYQISGHLS*ALRVYYPALALTKN
Trigger: ATTCTTTGTCAGGGCTAAAGCTGGATAATATACTCTCAGGGCCCAAGATAGATGTCCTGAAATCTGGTATGAAACAAGCAGCGACAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR TCA 90 bp TGTGAGAATCTTGGCATCTGCTCCCATCATGATAGCCATTTCACTTaGATTCGAATCCAAACTACTCTTCTTAAGCAACATTCCTGCTCG +
Preference number: 1 (lower is better)
Translates to: CENLGICSHHDSHFT*IRIQTTLLKQHSCS
Trigger: CGAGCAGGAATGTTGCTTAAGAAGAGTAGTTTGGATTCGAATTCAAGTGAAATGGCTATCATGATGGGAGCAGATGCCAAGATTCTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR GCA 90 bp ATGCTATTCCCAGTAGGGTGTCTACTAAAACAAAGTTTCAACTCCTaGGGTCTGTCAAAAAGCTTAAGGTCCAGTCTTGGAAAGTATTTG +
Preference number: 1 (lower is better)
Translates to: MLFPVGCLLKQSFNS*GLSKSLRSSLGKYL
Trigger: CAAATACTTTCCAAGACTGGACCTTAAGCTTTTTGACAGACCGCAGGAGTTGAAACTTTGTTTTAGTAGACACCCTACTGGGAATAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR GCA 90 bp AGTTATCAATTCTCTTGCTGCCTGTTCTTCAGGCACATGAATTTCTaGATCATCCTTTATAAGTTCATCCTTAGACCCGTATCCTTGGTC +
Preference number: 1 (lower is better)
Translates to: SYQFSCCLFFRHMNF*IILYKFILRPVSLV
Trigger: GACCAAGGATACGGGTCTAAGGATGAACTTATAAAGGATGATGCAGAAATTCATGTGCCTGAAGAACAGGCAGCAAGAGAATTGATAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR TCA 90 bp TTGAGATTAGTAGCTTCGCCAAAGACTGCATCTTCAACTGGATCTTaGGTAGAAAACAGCACATTTGATATACTACCAGTGCTACTTTTC +
Preference number: 1 (lower is better)
Translates to: LRLVASPKTASSTGS*VENSTFDILPVLLF
Trigger: GAAAAGTAGCACTGGTAGTATATCAAATGTGCTGTTTTCTACTCAAGATCCAGTTGAAGATGCAGTCTTTGGCGAAGCTACTAATCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR TCA 90 bp GCTAAAAGAGACAAAGGATCTAGTCCAGTTTCAACATCTTCCCTCTaGACCACCTTAGCAATACCATATAAACTACTTCTCTTATTCCTC +
Preference number: 1 (lower is better)
Translates to: AKRDKGSSPVSTSSL*TTLAIPYKLLLLFL
Trigger: GAGGAATAAGAGAAGTAGTTTATATGGTATTGCTAAGGTGGTTCAGAGGGAAGATGTTGAAACTGGACTAGATCCTTTGTCTCTTTTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR TCA 90 bp GGCACTTGGTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTaGAGACAGACTATTGTATGCAATTCCATATTCATTGTCAAATGC +
Preference number: 1 (lower is better)
Translates to: GTWWSINFLQPFKNL*RQTIVCNSIFIVKC
Trigger: GCATTTGACAATGAATATGGAATTGCATACAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCACCAAGTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR GCA 90 bp TTTGAGAAGAACCATGATCTGATTTTTCAAAGTCTTGCCCTTTCATaGCTCTTGGAAATGGAACTTCACCTGTTGGATAATGCAGTTTTC +
Preference number: 1 (lower is better)
Translates to: FEKNHDLIFQSLALS*LLEMELHLLDNAVF
Trigger: GAAAACTGCATTATCCAACAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGGCAAGACTTTGAAAAATCAGATCATGGTTCTTCTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR GCA 90 bp ATAAAGTTGATCAAGTCAGGTTCTGCTAAACTGGATACAGGTTTGTaGTCCAAGGATTCATTTGCCAATGGAATGCTTCCACTTTGTAAA +
Preference number: 1 (lower is better)
Translates to: IKLIKSGSAKLDTGL*SKDSFANGMLPLCK
Trigger: TTTACAAAGTGGAAGCATTCCATTGGCAAATGAATCCTTGGAGCACAAACCTGTATCCAGTTTAGCAGAACCTGACTTGATCAACTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR TCA 90 bp CTCTTATTCCTCAGATCTTTGGATACTGTTTTCAAGTCTCTGGACTaGTTACTGTTACTATCACTTAGTAGACTCTCATATGTATCTACT +
Preference number: 1 (lower is better)
Translates to: LLFLRSLDTVFKSLD*LLLLSLSRLSYVST
Trigger: AGTAGATACATATGAGAGTCTACTAAGTGATAGTAACAGTAATCAGTCCAGAGACTTGAAAACAGTATCCAAAGATCTGAGGAATAAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR CCA 90 bp TGTGACCTTTGCACAGTCTTTTTAAGCGGCTGCCTAAACTGTGCCAAGCCACGTTGCACCACTCGACACTaGCACTTGGTGGAGCATCAA +
Preference number: 2 (lower is better)
Translates to: CDLCTVFLSGCLNCAKPRCTTRH*HLVEHQ
Trigger: TTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCA...ACGTGGCTTGGCACAGTTTAGGCAGCCGCTTAAAAAGACTGTGCAAAGGTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR TCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCCCTTTCAAGAATCTCTaGAGACAGACTATTGTATGC +
Preference number: 2 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAPFKNL*RQTIVC
Trigger: GCATACAATAGTCTGTCTTCAGAGATTCTTGAAAGG...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380427.5
3UTR CAA 90 bp AGTTTTCCTACATCTCCACTACTGCTGCTACTGCCAAGACTTGTGTaGCTCTGGGTAAGTTCACTGGGGACCAACCCTGAGATACTTGTG +
Preference number: 2 (lower is better)
Translates to: SFPTSPLLLLLPRLV*LWVSSLGTNPEILV
Trigger: CACAAGTATCTCAGGGTTGGTCCCCAGTGAACTTACCCAGAGCAACACAAGTCTTGGCAGTAGCAGCAGTAGTGGAGATGTAGGAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR GCA 90 bp AAGAATTTACTACAGAACCCAACGAGCCATGTGGCGAAGAACGCACCAGTGCTGGAGACCTGTGACCTTTaGACAGTCTTTTTAAGCGGC +
Preference number: 2 (lower is better)
Translates to: KNLLQNPTSHVAKNAPVLETCDL*TVFLSG
Trigger: GCCGCTTAAAAAGACTGTGCAAAGGTCACAGGTCTC...CAGCACTGGTGCGTTCTTCGCCACATGGCTCGTTGGGTTCTGTAGTAAATTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR TCA 90 bp TGCCTGATGGTTTCTACTAAAGTGCTTGTTTCTTGTTGTTCCTCTGACAGGAGAGGTTCAGTAGGACTGTaGGGCTCTGGACTAGGTTGT +
Preference number: 2 (lower is better)
Translates to: CLMVSTKVLVSCCSSDRRGSVGL*GSGLGC
Trigger: ACAACCTAGTCCAGAGCCTCACAGTCCTACTGAACC...TCTCCTGTCAGAGGAACAACAAGAAACAAGCACTTTAGTAGAAACCATCAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR GCA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTGTGATCCACCCACCTTaGTCAGCCTCCCAAAGTGCT +
Preference number: 2 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGVIHPP*SASQSA
Trigger: AGCACTTTGGGAGGCTGAGCAAGGTGGGTGGATCAC...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
3UTR-3UTR GCA 90 bp AAGAATTTACTACAGAACCCAACGAGCCATGTGGCGAAGAACGCACCAGTGCTGAGTTATCAATTCTCTTaGTGCCTGTTCTTCAGGCAC +
Preference number: 2 (lower is better)
Translates to: KNLLQNPTSHVAKNAPVLSYQFS*CLFFRH
Trigger: GTGCCTGAAGAACAGGCAGCAAGAGAATTGATAACT...CAGCACTGGTGCGTTCTTCGCCACATGGCTCGTTGGGTTCTGTAGTAAATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR CCA 90 bp ACATCAAATATACCAGACGGAACTTTCACAATACTGCTGCCCCATGCAGGAGGTTCCATCATCAGGAGGTaGCTCTGGCGGCATTATAAA +
Preference number: 2 (lower is better)
Translates to: TSNIPDGTFTILLPHAGGSIIRR*LWRHYK
Trigger: TTTATAATGCCGCCAGAGCCACCTCCTGATGATGGA...ACCTCCTGCATGGGGCAGCAGTATTGTGAAAGTTCCGTCTGGTATATTTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR CAA 90 bp GCTACTGTCGCTGCTTGTTTCATACCAGATTTCAGGACATCTATCTaGGGCCCTGAGAGTATATTATCCAGCTTTAGCCCTGACAAAGAA +
Preference number: 2 (lower is better)
Translates to: ATVAACFIPDFRTSI*GPESILSSFSPDKE
Trigger: TTCTTTGTCAGGGCTAAAGCTGGATAATATACTCTCAGGGCCCAAGATAGATGTCCTGAAATCTGGTATGAAACAAGCAGCGACAGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR CAA 90 bp CAGGTTCTGCTAAACTGGATACAGGTTTGTGCTCCAAGGATTCATTaGCCAATGGAATGCTTCCACTTTGTAAACTGTCACCAGAGGTAC +
Preference number: 2 (lower is better)
Translates to: QVLLNWIQVCAPRIH*PMECFHFVNCHQRY
Trigger: GTACCTCTGGTGACAGTTTACAAAGTGGAAGCATTCCATTGGCAAATGAATCCTTGGAGCACAAACCTGTATCCAGTTTAGCAGAACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR TCA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGTCTCCTGCCTCAGCCTaGGTAGCTGGGACTACAGTG +
Preference number: 2 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMSPASA*VAGTTV
Trigger: CACTGTAGTCCCAGCTACTCAGGCTGAGGCAGGAGA...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
3UTR-3UTR GCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGAGGCCTGAGCCACCGTaGCCGGCCATGTTGCTTTTA +
Preference number: 2 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRRPEPP*PAMLLL
Trigger: TAAAAGCAACATGGCCGGGCACGGTGGCTCAGGCCT...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
3UTR-3UTR GCA 90 bp AAGAATTTACTACAGAACCCAACGAGCCATGTGGCGAAGAACGCACCAGTGCTGCTTAAGCAACATTCCTaGTCGACTTTCAGAACTAAA +
Preference number: 2 (lower is better)
Translates to: KNLLQNPTSHVAKNAPVLLKQHS*STFRTK
Trigger: TTTAGTTCTGAAAGTCGAGCAGGAATGTTGCTTAAG...CAGCACTGGTGCGTTCTTCGCCACATGGCTCGTTGGGTTCTGTAGTAAATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR CCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGCTCAGCCTGAGTAGCTaGGACTACAGTGGTGCGCCT +
Preference number: 2 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRLSLSS*DYSGAP
Trigger: AGGCGCACCACTGTAGTCCCAGCTACTCAGGCTGAG...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
3UTR-3UTR TCA 90 bp TTGCCAATGGAATGCTTCCACTTTGTAAACTGTCACCAGAGGTACTTGGTTTCACTGTCTGTGCTAGAGTaGTTATCAATGGACTCAAGC +
Preference number: 2 (lower is better)
Translates to: LPMECFHFVNCHQRYLVSLSVLE*LSMDSS
Trigger: GCTTGAGTCCATTGATAATCACTCTAGCACAGACAG...TGAAACCAAGTACCTCTGGTGACAGTTTACAAAGTGGAAGCATTCCATTGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR GCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATCTCCAAAACACTTCCTaGACCACTCGACACTGGCAC +
Preference number: 2 (lower is better)
Translates to: GLKIFNINKPWDIQMALHLQNTS*TTRHWH
Trigger: GTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGAG...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
3UTR-3UTR GCA 90 bp TTGCCAATGGAATGCTTCCACTTTGTAAACTGTCACCAGAGGTACTTGGTTTCAGAGAATCTTGGCATCTaGTCCCATCATGATAGCCAT +
Preference number: 2 (lower is better)
Translates to: LPMECFHFVNCHQRYLVSENLGI*SHHDSH
Trigger: ATGGCTATCATGATGGGAGCAGATGCCAAGATTCTC...TGAAACCAAGTACCTCTGGTGACAGTTTACAAAGTGGAAGCATTCCATTGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR GCA 90 bp AAGAATTTACTACAGAACCCAACGAGCCATGTGGCGAAGAACGCACCAGTGCTGATATGTATCTACTGTTaGAGTAGTTTTAGGTACGTC +
Preference number: 2 (lower is better)
Translates to: KNLLQNPTSHVAKNAPVLICIYC*SSFRYV
Trigger: GACGTACCTAAAACTACTGCAACAGTAGATACATAT...CAGCACTGGTGCGTTCTTCGCCACATGGCTCGTTGGGTTCTGTAGTAAATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR CCA 90 bp TGTGACCTTTGCACAGTCTTTTTAAGCGGCTGCCTAAACTGTGCCAAGCCACGTCTAGTTCTATCAATCTaGTATCTTCTGCTGAATCAA +
Preference number: 2 (lower is better)
Translates to: CDLCTVFLSGCLNCAKPRLVLSI*YLLLNQ
Trigger: TTGATTCAGCAGAAGATACCAGATTGATAGAACTAG...ACGTGGCTTGGCACAGTTTAGGCAGCCGCTTAAAAAGACTGTGCAAAGGTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR CCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGCTATCCACACTACCGTaGCTCACCGTGTCCCCATCA +
Preference number: 2 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRLSTLP*LTVSPS
Trigger: TGATGGGGACACGGTGAGCCACGGTAGTGTGGATAG...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR CCA 90 bp GATTTTTCAAAGTCTTGCCCTTTCATGCCTCTTGGAAATGGAACTTCACCTGTTCTACCCACATCTTACTaGCTACTGTCGCTGCTTGTT +
Preference number: 2 (lower is better)
Translates to: DFSKSCPFMPLGNGTSPVLPTSY*LLSLLV
Trigger: AACAAGCAGCGACAGTAGCCAGTAAGATGTGGGTAG...AACAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGGCAAGACTTTGAAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR CCA 90 bp TGCCTGATGGTTTCTACTAAAGTGCTTGTTTCTTGTTGTTCCTCTGACAGGAGACCCTTTCATGCCTCTTaGAAATGGAACTTCACCTGT +
Preference number: 2 (lower is better)
Translates to: CLMVSTKVLVSCCSSDRRPFHAS*KWNFTC
Trigger: ACAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGG...TCTCCTGTCAGAGGAACAACAAGAAACAAGCACTTTAGTAGAAACCATCAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR GCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTCTCCAAAACACTTCCTaGACCACTCGACACTGGCAC +
Preference number: 2 (lower is better)
Translates to: YILSPRVTSIPYSPVLTILQNTS*TTRHWH
Trigger: GTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGAG...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
3UTR-3UTR GCA 90 bp GATTTTTCAAAGTCTTGCCCTTTCATGCCTCTTGGAAATGGAACTTCACCTGTTCTTAGGACATGTCAATaGTGCTGTGAGAATCTTGGC +
Preference number: 2 (lower is better)
Translates to: DFSKSCPFMPLGNGTSPVLRTCQ*CCENLG
Trigger: GCCAAGATTCTCACAGCAGCATTGACATGTCCTAAG...AACAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGGCAAGACTTTGAAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR GCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGGTTCGAGAGGGGGTTTaGTGCTTGAAACGCCCAGTA +
Preference number: 2 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRVREGV*CLKRPV
Trigger: TACTGGGCGTTTCAAGCAGCAAACCCCCTCTCGAAC...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR GCA 90 bp TTGCCAATGGAATGCTTCCACTTTGTAAACTGTCACCAGAGGTACTTGGTTTCAACTGGCTACTGTCGCTaGTTGTTTCATACCAGATTT +
Preference number: 2 (lower is better)
Translates to: LPMECFHFVNCHQRYLVSTGYCR*LFHTRF
Trigger: AAATCTGGTATGAAACAAGCAGCGACAGTAGCCAGT...TGAAACCAAGTACCTCTGGTGACAGTTTACAAAGTGGAAGCATTCCATTGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR CAA 90 bp TCCATAAAGTTGATCAAGTCAGGTTCTGCTAAACTGGATACAGGTTaGTGCTCCAAGGATTCATTTGCCAATGGAATGCTTCCACTTTGT +
Preference number: 2 (lower is better)
Translates to: SIKLIKSGSAKLDTG*CSKDSFANGMLPLC
Trigger: ACAAAGTGGAAGCATTCCATTGGCAAATGAATCCTTGGAGCACAAACCTGTATCCAGTTTAGCAGAACCTGACTTGATCAACTTTATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR TCA 90 bp AAGATTCAAGTTCTTTACGGAGTACTAGAGGACTCAAGTAGGGCACAGAAACAGTGGGTTCTTGCAATATaGAGTAGAGAAGTCTTAGGA +
Preference number: 2 (lower is better)
Translates to: KIQVLYGVLEDSSRAQKQWVLAI*SREVLG
Trigger: TCCTAAGACTTCTCTACTTCATATTGCAAGAACCCA...CTGTTTCTGTGCCCTACTTGAGTCCTCTAGTACTCCGTAAAGAACTTGAATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR CAA 90 bp GTTTCTTCAGTTATGATCTGGTTATGTTTTGGGAAGTCCATAAAGTaGATCAAGTCAGGTTCTGCTAAACTGGATACAGGTTTGTGCTCC +
Preference number: 2 (lower is better)
Translates to: VSSVMIWLCFGKSIK*IKSGSAKLDTGLCS
Trigger: GGAGCACAAACCTGTATCCAGTTTAGCAGAACCTGACTTGATCAACTTTATGGACTTCCCAAAACATAACCAGATCATAACTGAAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR TCA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTTTGAATGTTTCCAGATaGAATCTAATCCCCAAGCCT +
Preference number: 2 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGLNVSR*NLIPKP
Trigger: AGGCTTGGGGATTAGATTTCATCTGGAAACATTCAA...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
3UTR-3UTR TCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCTTGAATGTTTCCAGATaGAATCTAATCCCCAAGCCT +
Preference number: 2 (lower is better)
Translates to: FQMKSNPQALCVNILVNLLNVSR*NLIPKP
Trigger: AGGCTTGGGGATTAGATTTCATCTGGAAACATTCAA...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
3UTR-3UTR TCA 90 bp TGCCTGATGGTTTCTACTAAAGTGCTTGTTTCTTGTTGTTCCTCTGACAGGAGACTGTTTCTTCAGTTATaGTCTGGTTATGTTTTGGGA +
Preference number: 2 (lower is better)
Translates to: CLMVSTKVLVSCCSSDRRLFLQL*SGYVLG
Trigger: TCCCAAAACATAACCAGATCATAACTGAAGAAACAG...TCTCCTGTCAGAGGAACAACAAGAAACAAGCACTTTAGTAGAAACCATCAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR GCA 90 bp TTGCCAATGGAATGCTTCCACTTTGTAAACTGTCACCAGAGGTACTTGGTTTCAGGAGCATCAATTTTCTaGAACCTTTCAAGAATCTCT +
Preference number: 2 (lower is better)
Translates to: LPMECFHFVNCHQRYLVSGASIF*NLSRIS
Trigger: AGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCC...TGAAACCAAGTACCTCTGGTGACAGTTTACAAAGTGGAAGCATTCCATTGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR TCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGATTGAATGTTTCCAGATaGAATCTAATCCCCAAGCCT +
Preference number: 2 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGLNVSR*NLIPKP
Trigger: AGGCTTGGGGATTAGATTTCATCTGGAAACATTCAA...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
3UTR-3UTR TCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGTCAACATCTTCCCTCTaGACCACCTTAGCAATACCA +
Preference number: 2 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRSTSSL*TTLAIP
Trigger: TGGTATTGCTAAGGTGGTTCAGAGGGAAGATGTTGA...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR CCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGGACACTGGCACTTGGTaGAGCATCAATTTTCTGCAA +
Preference number: 2 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRDTGTW*SINFLQ
Trigger: TTGCAGAAAATTGATGCTCCACCAAGTGCCAGTGTC...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
3UTR-3UTR CCA 90 bp TTGCCAATGGAATGCTTCCACTTTGTAAACTGTCACCAGAGGTACTTGGTTTCACTGTTTTCAAGTCTCTaGACTGATTACTGTTACTAT +
Preference number: 2 (lower is better)
Translates to: LPMECFHFVNCHQRYLVSLFSSL*TDYCYY
Trigger: ATAGTAACAGTAATCAGTCCAGAGACTTGAAAACAG...TGAAACCAAGTACCTCTGGTGACAGTTTACAAAGTGGAAGCATTCCATTGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR GCA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGAAATGCCAGAACTTATaGCTATATGAGTCAGGTTGT +
Preference number: 2 (lower is better)
Translates to: LVFKGQVYISQKENISPLKCQNL*LYESGC
Trigger: ACAACCTGACTCATATAGGCATAAGTTCTGGCATTT...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
3UTR-3UTR TCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTTGAATGTTTCCAGATaGAATCTAATCCCCAAGCCT +
Preference number: 2 (lower is better)
Translates to: YILSPRVTSIPYSPVLTILNVSR*NLIPKP
Trigger: AGGCTTGGGGATTAGATTTCATCTGGAAACATTCAA...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
3UTR-3UTR TCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTCCTTTCAAGAATCTCTaGAGACAGACTATTGTATGC +
Preference number: 2 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIPFKNL*RQTIVC
Trigger: GCATACAATAGTCTGTCTTCAGAGATTCTTGAAAGG...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
3UTR-3UTR TCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGGAATCTCTATTTAAATaGGAGGCGCTCCAAAACACT +
Preference number: 2 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRESLFK*EALQNT
Trigger: AGTGTTTTGGAGCGCCTCTCATTTAAATAGAGATTC...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
3UTR-3UTR GCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGCATCAAAACCTCCATTaGACAATTCTGATAGATGCT +
Preference number: 2 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRHQNLH*TILIDA
Trigger: AGCATCTATCAGAATTGTGCAATGGAGGTTTTGATG...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR CCA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGCTACAGTGGTGCGCCTaGCTAATTTTTGTATTTTTA +
Preference number: 2 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMLQWCA*LIFVFL
Trigger: TAAAAATACAAAAATTAGCCAGGCGCACCACTGTAG...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
3UTR-3UTR CAA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCTCTAATCCCCAAGCCTaGTGTGTCAACATTCTAGTG +
Preference number: 3 (lower is better)
Translates to: GVISTHCSLCLSSSDSPASNPQA*CVNILV
Trigger: CACTAGAATGTTGACACACAAGGCTTGGGGATTAGA...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
3UTR GCA 72 bp CCTTTGCACAGTCTTTTTAAGCGGCTGCCTAAACTGTaGCAAGCCACGTACCACATTCCGTACCTTCGTCCA +
Preference number: 3 (lower is better)
Translates to: PLHSLFKRLPKL*QATYHIPYLRP
Trigger: TGGACGAAGGTACGGAATGTGGTACGTGGCTTGGCACAGTTTAGGCAGCCGCTTAAAAAGACTGTGCAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR CCA 72 bp GAGGCGCTCCAAAACACTTCCTGCACCACTCGACACTaGCACTTGGTGGAGCATCAATTTTCTGCAACCTTT +
Preference number: 3 (lower is better)
Translates to: EALQNTSCTTRH*HLVEHQFSATF
Trigger: AAAGGTTGCAGAAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGAGCGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
3UTR CCA 72 bp CCACTACTGCTGCTACTGCCAAGACTTGTGTTGCTCTaGGTAAGTTCACTGGGGACCAACCCTGAGATACTT +
Preference number: 3 (lower is better)
Translates to: PLLLLLPRLVLL*VSSLGTNPEIL
Trigger: AAGTATCTCAGGGTTGGTCCCCAGTGAACTTACCCAGAGCAACACAAGTCTTGGCAGTAGCAGCAGTAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR TCA 72 bp CGCACCAGTGCTGACAAAGAAGTTGAACGTTCTTTATaGGTTCGAGAGGGGGTTTGCTGCTTGAAACGCCCA +
Preference number: 3 (lower is better)
Translates to: RTSADKEVERSL*VREGVCCLKRP
Trigger: TGGGCGTTTCAAGCAGCAAACCCCCTCTCGAACTCATAAAGAACGTTCAACTTCTTTGTCAGCACTGGTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR CCA 72 bp CCATTGTTAGCATCATTAGAACTATCCACACTACCGTaGCTCACCGTGTCCCCATCACTTCCACCTGTGACA +
Preference number: 3 (lower is better)
Translates to: PLLASLELSTLP*LTVSPSLPPVT
Trigger: TGTCACAGGTGGAAGTGATGGGGACACGGTGAGCCACGGTAGTGTGGATAGTTCTAATGATGCTAACAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR CCA 72 bp GAGGACTCAAGTAGGGCACAGAAACAGGGGGAGGATTaGGTCTTTTTCCTAAAGGATCCACAACTTCCTGCA +
Preference number: 3 (lower is better)
Translates to: EDSSRAQKQGED*VFFLKDPQLPA
Trigger: TGCAGGAAGTTGTGGATCCTTTAGGAAAAAGACCCAATCCTCCCCCTGTTTCTGTGCCCTACTTGAGTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR TCA 72 bp AGGTTCAGTAGGACTGTGAGGCTCTGGACTAGGTTGTaGATGTTTTGCCACAATAGCAGAGGCATCACACAC +
Preference number: 3 (lower is better)
Translates to: RFSRTVRLWTRL*MFCHNSRGITH
Trigger: GTGTGTGATGCCTCTGCTATTGTGGCAAAACATTCACAACCTAGTCCAGAGCCTCACAGTCCTACTGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR TCA 72 bp TGTGTTGCTCTGGGTAAGTTCACTGGGGACCAACCCTaGGATACTTGTGTTAGGCGATATATTCTCCCCCAA +
Preference number: 3 (lower is better)
Translates to: CVALGKFTGDQP*DTCVRRYILPQ
Trigger: TTGGGGGAGAATATATCGCCTAACACAAGTATCTCAGGGTTGGTCCCCAGTGAACTTACCCAGAGCAACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR GCA 72 bp CTTTCCTCAAGCATCTCTGGCACCGGAGATGATCTGTaGTCAGGATTCCAAGTGCTTTCAGACATACAAGTC +
Preference number: 3 (lower is better)
Translates to: LSSSISGTGDDL*SGFQVLSDIQV
Trigger: GACTTGTATGTCTGAAAGCACTTGGAATCCTGAGCACAGATCATCTCCGGTGCCAGAGATGCTTGAGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR CCA 72 bp AGCTGTAGGCAGACGCAACAGCTACCCACATCTTACTaGCTACTGTCGCTGCTTGTTTCATACCAGATTTCA +
Preference number: 3 (lower is better)
Translates to: SCRQTQQLPTSY*LLSLLVSYQIS
Trigger: TGAAATCTGGTATGAAACAAGCAGCGACAGTAGCCAGTAAGATGTGGGTAGCTGTTGCGTCTGCCTACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR CAA 90 bp AAGAATTTACTACAGAACCCAACGAGCCATGTGGCGAAGAACGCACCAGTGCTGTCTAATCCCCAAGCCTaGTGTGTCAACATTCTAGTG +
Preference number: 3 (lower is better)
Translates to: KNLLQNPTSHVAKNAPVLSNPQA*CVNILV
Trigger: CACTAGAATGTTGACACACAAGGCTTGGGGATTAGA...CAGCACTGGTGCGTTCTTCGCCACATGGCTCGTTGGGTTCTGTAGTAAATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR CCA 72 bp ATGAAACGGTCGCTGGGTAAAGTCAATATTCTGCAATaGGCCTCCAACACTGTGACTTCGAGTCAAAGACAC +
Preference number: 3 (lower is better)
Translates to: MKRSLGKVNILQ*ASNTVTSSQRH
Trigger: GTGTCTTTGACTCGAAGTCACAGTGTTGGAGGCCCATTGCAGAATATTGACTTTACCCAGCGACCGTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR CAA 90 bp TGCCTGATGGTTTCTACTAAAGTGCTTGTTTCTTGTTGTTCCTCTGACAGGAGAGAGGGGGTTTGCTGCTaGAAACGCCCAGTAAAAGTT +
Preference number: 3 (lower is better)
Translates to: CLMVSTKVLVSCCSSDRREGVCC*KRPVKV
Trigger: AACTTTTACTGGGCGTTTCAAGCAGCAAACCCCCTC...TCTCCTGTCAGAGGAACAACAAGAAACAAGCACTTTAGTAGAAACCATCAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR GCA 72 bp CACTCGACACTGGCACTTGGTGGAGCATCAATTTTCTaGAACCTTTCAAGAATCTCTGAAGACAGACTATTG +
Preference number: 3 (lower is better)
Translates to: HSTLALGGASIF*NLSRISEDRLL
Trigger: CAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
3UTR CCA 72 bp ATAGCACACCTGTTTAGTTCTCTTAGCCATGAGAGGTaGACTCTTTGTAATGCTATTCCCAGTAGGGTGTCT +
Preference number: 3 (lower is better)
Translates to: IAHLFSSLSHER*TLCNAIPSRVS
Trigger: AGACACCCTACTGGGAATAGCATTACAAAGAGTCCACCTCTCATGGCTAAGAGAACTAAACAGGTGTGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR TCA 72 bp CTTGTGTGTCAACATTCTAGTGAATCTCTATTTAAATaGGAGGCGCTCCAAAACACTTCCTGCACCACTCGA +
Preference number: 3 (lower is better)
Translates to: LVCQHSSESLFK*EALQNTSCTTR
Trigger: TCGAGTGGTGCAGGAAGTGTTTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAATGTTGACACACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
3UTR TCA 72 bp GTGCTTTCAGACATACAAGTCCTACTATCAGGTAGGTaGCAGCTAACATTCTCAAAGCTATGGGTTCTTGCA +
Preference number: 3 (lower is better)
Translates to: VLSDIQVLLSGR*QLTFSKLWVLA
Trigger: TGCAAGAACCCATAGCTTTGAGAATGTTAGCTGTCACCTACCTGATAGTAGGACTTGTATGTCTGAAAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR TCA 72 bp TTTTCACTTTCAGGATTTTCCTGTGCTGGTGAACCATaGTCTAAAGGTAGGCTTGATCTCCTCTCTAGAGCA +
Preference number: 3 (lower is better)
Translates to: FSLSGFSCAGEP*SKGRLDLLSRA
Trigger: TGCTCTAGAGAGGAGATCAAGCCTACCTTTAGATCATGGTTCACCAGCACAGGAAAATCCTGAAAGTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR CAA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCTCTAATCCCCAAGCCTaGTGTGTCAACATTCTAGTG +
Preference number: 3 (lower is better)
Translates to: FQMKSNPQALCVNILVNLSNPQA*CVNILV
Trigger: CACTAGAATGTTGACACACAAGGCTTGGGGATTAGA...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
3UTR TCA 72 bp TGCAGACTATTTGGAAGACTAACTGTTGAGATGCCATaGAACGGTCGCTGGGTAAAGTCAATATTCTGCAAT +
Preference number: 3 (lower is better)
Translates to: CRLFGRLTVEMP*NGRWVKSIFCN
Trigger: ATTGCAGAATATTGACTTTACCCAGCGACCGTTTCATGGCATCTCAACAGTTAGTCTTCCAAATAGTCTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR GCA 72 bp TTCTCTTGCTGCCTGTTCTTCAGGCACATGAATTTCTaGATCATCCTTTATAAGTTCATCCTTAGACCCGTA +
Preference number: 3 (lower is better)
Translates to: FSCCLFFRHMNF*IILYKFILRPV
Trigger: TACGGGTCTAAGGATGAACTTATAAAGGATGATGCAGAAATTCATGTGCCTGAAGAACAGGCAGCAAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR CAA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGACTCGACACTGGCACTaGGTGGAGCATCAATTTTCT +
Preference number: 3 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRTRHWH*VEHQFS
Trigger: AGAAAATTGATGCTCCACCAAGTGCCAGTGTCGAGT...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
3UTR-3UTR CAA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGGAAACAGGGGGAGGATaGGGTCTTTTTCCTAAAGGA +
Preference number: 3 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRETGGG*GLFPKG
Trigger: TCCTTTAGGAAAAAGACCCAATCCTCCCCCTGTTTC...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR TCA 72 bp CTTGGCATCTGCTCCCATCATGATAGCCATTTCACTTaGATTCGAATCCAAACTACTCTTCTTAAGCAACAT +
Preference number: 3 (lower is better)
Translates to: LGICSHHDSHFT*IRIQTTLLKQH
Trigger: ATGTTGCTTAAGAAGAGTAGTTTGGATTCGAATTCAAGTGAAATGGCTATCATGATGGGAGCAGATGCCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR TCA 72 bp GACAAAGGATCTAGTCCAGTTTCAACATCTTCCCTCTaGACCACCTTAGCAATACCATATAAACTACTTCTC +
Preference number: 3 (lower is better)
Translates to: DKGSSPVSTSSL*TTLAIPYKLLL
Trigger: GAGAAGTAGTTTATATGGTATTGCTAAGGTGGTTCAGAGGGAAGATGTTGAAACTGGACTAGATCCTTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR TCA 72 bp GTAAAGTCAATATTCTGCAATGGGCCTCCAACACTGTaGCTTCGAGTCAAAGACACATTTCGCTTTGATAAA +
Preference number: 3 (lower is better)
Translates to: VKSIFCNGPPTL*LRVKDTFRFDK
Trigger: TTTATCAAAGCGAAATGTGTCTTTGACTCGAAGTCACAGTGTTGGAGGCCCATTGCAGAATATTGACTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR CCA 72 bp AGAGCCTGTTTCTTCAGTTATGATCTGGTTATGTTTTaGGAAGTCCATAAAGTTGATCAAGTCAGGTTCTGC +
Preference number: 3 (lower is better)
Translates to: RACFFSYDLVMF*EVHKVDQVRFC
Trigger: GCAGAACCTGACTTGATCAACTTTATGGACTTCCCAAAACATAACCAGATCATAACTGAAGAAACAGGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR-3UTR CAA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTCTAATCCCCAAGCCTaGTGTGTCAACATTCTAGTG +
Preference number: 3 (lower is better)
Translates to: YILSPRVTSIPYSPVLTISNPQA*CVNILV
Trigger: CACTAGAATGTTGACACACAAGGCTTGGGGATTAGA...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
3UTR GCA 72 bp ATTCGAATCCAAACTACTCTTCTTAAGCAACATTCCTaGTCGACTTTCAGAACTAAAACTACAACTCCTCTC +
Preference number: 3 (lower is better)
Translates to: IRIQTTLLKQHS*STFRTKTTTPL
Trigger: GAGAGGAGTTGTAGTTTTAGTTCTGAAAGTCGAGCAGGAATGTTGCTTAAGAAGAGTAGTTTGGATTCGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR GCA 72 bp AACCATGATCTGATTTTTCAAAGTCTTGCCCTTTCATaGCTCTTGGAAATGGAACTTCACCTGTTGGATAAT +
Preference number: 3 (lower is better)
Translates to: NHDLIFQSLALS*LLEMELHLLDN
Trigger: ATTATCCAACAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGGCAAGACTTTGAAAAATCAGATCATGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR TCA 72 bp GTTATCAATTCTCTTGCTGCCTGTTCTTCAGGCACATaGATTTCTGCATCATCCTTTATAAGTTCATCCTTA +
Preference number: 3 (lower is better)
Translates to: VINSLAACSSGT*ISASSFISSSL
Trigger: TAAGGATGAACTTATAAAGGATGATGCAGAAATTCATGTGCCTGAAGAACAGGCAGCAAGAGAATTGATAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR TCA 72 bp CATTTGATATACTACCAGTGCTACTTTTCCTGCTGTTaGCATCAAATATACCAGACGGAACTTTCACAATAC +
Preference number: 3 (lower is better)
Translates to: HLIYYQCYFSCC*HQIYQTELSQY
Trigger: GTATTGTGAAAGTTCCGTCTGGTATATTTGATGTCAACAGCAGGAAAAGTAGCACTGGTAGTATATCAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR TCA 72 bp CTCAGATCTTTGGATACTGTTTTCAAGTCTCTGGACTaGTTACTGTTACTATCACTTAGTAGACTCTCATAT +
Preference number: 3 (lower is better)
Translates to: LRSLDTVFKSLD*LLLLSLSRLSY
Trigger: ATATGAGAGTCTACTAAGTGATAGTAACAGTAATCAGTCCAGAGACTTGAAAACAGTATCCAAAGATCTGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR CCA 72 bp GCTCACTTTTCTGTGAATCATCTAGTTCTATCAATCTaGTATCTTCTGCTGAATCAAAATCAACCTTATCTG +
Preference number: 3 (lower is better)
Translates to: AHFSVNHLVLSI*YLLLNQNQPYL
Trigger: CAGATAAGGTTGATTTTGATTCAGCAGAAGATACCAGATTGATAGAACTAGATGATTCACAGAAAAGTGAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR CCA 72 bp TATTCCTCAGATCTTTGGATACTGTTTTCAAGTCTCTaGACTGATTACTGTTACTATCACTTAGTAGACTCT +
Preference number: 3 (lower is better)
Translates to: YSSDLWILFSSL*TDYCYYHLVDS
Trigger: AGAGTCTACTAAGTGATAGTAACAGTAATCAGTCCAGAGACTTGAAAACAGTATCCAAAGATCTGAGGAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR GCA 72 bp ACACTATGTGGTAATAAGTTAAGATGTACTCTTAAATaGCAGAACTTATGCCTATATGAGTCAGGTTGTCTT +
Preference number: 3 (lower is better)
Translates to: TLCGNKLRCTLK*QNLCLYESGCL
Trigger: AAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAAGAGTACATCTTAACTTATTACCACATAGTGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCACCGGATTCGCGGACTaGGCGCGCTCGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPATGFAD*ARSAGQ
Trigger: CTGCCCTGCCGAGCGCGCCCAGTCCGCGAATCCGGT...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCACAGCCAAGGAATTCTaGGGTCGAACTGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPATAKEF*GRTGGA
Trigger: GGCTCCTCCAGTTCGACCCCAGAATTCCTTGGCTGT...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR TCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCCCTGGACACTGCAGGTaGGCTCTTTTCACTTTCAGG +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAPGHCR*ALFTFR
Trigger: CCTGAAAGTGAAAAGAGCTCACCTGCAGTGTCCAGG...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR TCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCACTGGGGACCAACCCTaGGATACTTGTGTTAGGCGA +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPATGDQP*DTCVRR
Trigger: TCGCCTAACACAAGTATCTCAGGGTTGGTCCCCAGT...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR TCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCGGTTCAGTAGGACTGTaGGGCTCTGGACTAGGTTGT +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAGSVGL*GSGLGC
Trigger: ACAACCTAGTCCAGAGCCTCACAGTCCTACTGAACC...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCCCCAGTCAAGACAGCTaGCCTAAGAGAATGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAPSQDS*PKRMQQ
Trigger: CTGCTGCATTCTCTTAGGCCAGCTGTCTTGACTGGG...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR GCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCCGAGAGGGGGTTTGCTaGTTGAAACGCCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAREGVC*LKRPVK
Trigger: TTTTACTGGGCGTTTCAAGCAGCAAACCCCCTCTCG...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR GCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCCACTACTGCTGCTACTaGCAAGACTTGTGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAHYCCY*QDLCCS
Trigger: AGAGCAACACAAGTCTTGGCAGTAGCAGCAGTAGTG...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCACCGGATTCGCGGACTaGGCGCGCTCGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLTGFAD*ARSAGQ
Trigger: CTGCCCTGCCGAGCGCGCCCAGTCCGCGAATCCGGT...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR TCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATGGTGCCTCCGCGCTGTaGGCCGTCGGACAGTGCGGG +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHGASAL*AVGQCG
Trigger: CCCGCACTGTCCGACGGCTCACAGCGCGGAGGCACC...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602925.5
CDS-3UTR GCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCCTGGATACAGGTTTGTaGTCCAAGGATTCATTTGCC +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPALDTGL*SKDSFA
Trigger: GGCAAATGAATCCTTGGAGCACAAACCTGTATCCAG...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCCCCTTTCATGCCTCTTaGAAATGGAACTTCACCTGT +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAPFHAS*KWNFTC
Trigger: ACAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGG...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCGTCACCAGAGGTACTTaGTTTCAGGAAAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAVTRGT*FQEKAC
Trigger: GCAAGCTTTTTCCTGAAACCAAGTACCTCTGGTGAC...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCTGTGAGGATAAGTCCTaGCAAGTTACTAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPACEDKS*QVTRKV
Trigger: GACCTTCCTAGTAACTTGCCAGGACTTATCCTCACA...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCCTGGAAGTGGATATTTaGTTTCAGGATCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPALEVDI*FQDPST
Trigger: AGTGCTGGGATCCTGAAACCAAATATCCACTTCCAG...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCATCAGGAGGTGGCTCTaGCGGCATTATAAATACAGT +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAIRRWL*RHYKYS
Trigger: ACTGTATTTATAATGCCGCCAGAGCCACCTCCTGAT...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCAACACAGAAACACGCTaGAACCCCACATTCCACAAT +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPANTETR*NPTFHN
Trigger: ATTGTGGAATGTGGGGTTCCAGCGTGTTTCTGTGTT...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATTACAGCCAGGGGCGATaGCCGGAGCGCTGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHYSQGR*PERWPA
Trigger: CGCGGGCCAGCGCTCCGGCCATCGCCCCTGGCTGTA...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602925.5
CDS-3UTR TCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCCTCCTCTCTAGAGCATaGATAAATGCAGTAGTCATG +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPALLSRA*INAVVM
Trigger: CATGACTACTGCATTTATTCATGCTCTAGAGAGGAG...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR TCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCCTACTATCAGGTAGGTaGCAGCTAACATTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPALLSGR*QLTFSK
Trigger: CTTTGAGAATGTTAGCTGTCACCTACCTGATAGTAG...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR GCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCAGTCTTGCCCTTTCATaGCTCTTGGAAATGGAACTT +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPASLALS*LLEMEL
Trigger: AAGTTCCATTTCCAAGAGGCATGAAAGGGCAAGACT...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR GCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCGCTGGCCTAAGAGAATaGAGCAGAATTTTACTCTCA +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAAGLRE*SRILLS
Trigger: TGAGAGTAAAATTCTGCTGCATTCTCTTAGGCCAGC...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR GCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCATATGCCTGCTGAAGTaGTCTGACTTTAGGATGAGA +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAICLLK*SDFRMR
Trigger: TCTCATCCTAAAGTCAGAGCACTTCAGCAGGCATAT...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCCATGCCTCTTGGAAATaGAACTTCACCTGTTGGATA +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAHASWK*NFTCWI
Trigger: TATCCAACAGGTGAAGTTCCATTTCCAAGAGGCATG...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCAAACAGGGGGAGGATTaGGTCTTTTTCCTAAAGGAT +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAKQGED*VFFLKD
Trigger: ATCCTTTAGGAAAAAGACCCAATCCTCCCCCTGTTT...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp GTGTGCTCCCCATTGTTAGCATCATTAGAACTATCCACACTACCGTGGCTCACCTGCACCACTCGACACTaGCACTTGGTGGAGCATCAA +
Preference number: 4 (lower is better)
Translates to: VCSPLLASLELSTLPWLTCTTRH*HLVEHQ
Trigger: TTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCA...GGTGAGCCACGGTAGTGTGGATAGTTCTAATGATGCTAACAATGGGGAGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCCTTGGCCCACTGTGGTaGATTTGTATAACATCTCTT +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPALGPLW*ICITSL
Trigger: AAGAGATGTTATACAAATCCACCACAGTGGGCCAAG...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR TCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCAGAAGAACCATGATCTaGTTTTTCAAAGTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPARRTMI*FFKVLP
Trigger: GGGCAAGACTTTGAAAAATCAGATCATGGTTCTTCT...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR TCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCAGAACATTATTGTGCTaGATACTCTGCCTGATGGTT +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPARTLLC*ILCLMV
Trigger: AACCATCAGGCAGAGTATTCAGCACAATAATGTTCT...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR TCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCTTGAATGTTTCCAGATaGAATCTAATCCCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPALNVSR*NLIPKP
Trigger: AGGCTTGGGGATTAGATTTCATCTGGAAACATTCAA...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR GCA 90 bp AAGAATTTACTACAGAACCCAACGAGCCATGTGGCGAAGAACGCACCAGTGCTGCGAGAGGGGGTTTGCTaGTTGAAACGCCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: KNLLQNPTSHVAKNAPVLREGVC*LKRPVK
Trigger: TTTTACTGGGCGTTTCAAGCAGCAAACCCCCTCTCG...CAGCACTGGTGCGTTCTTCGCCACATGGCTCGTTGGGTTCTGTAGTAAATTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCGAATATACACAAGTTTaGTATCCTGGGACAGAGATG +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAEYTQV*YPGTEM
Trigger: CATCTCTGTCCCAGGATAGCAAACTTGTGTATATTC...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR GCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCAAGGGTATAGAATTTTaGATAGGCACGATCTCGACT +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAKGIEF*IGTIST
Trigger: AGTCGAGATCGTGCCTATGCAAAATTCTATACCCTT...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR GCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCAGTTTTTGTCAACTTTaGAGAAGGTATGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPASFCQL*RRYEEE
Trigger: CTCCTCCTCATACCTTCTGCAAAGTTGACAAAAACT...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp GTGTGCTCCCCATTGTTAGCATCATTAGAACTATCCACACTACCGTGGCTCACCAGACTTGTGTTGCTCTaGGTAAGTTCACTGGGGACC +
Preference number: 4 (lower is better)
Translates to: VCSPLLASLELSTLPWLTRLVLL*VSSLGT
Trigger: GGTCCCCAGTGAACTTACCCAGAGCAACACAAGTCT...GGTGAGCCACGGTAGTGTGGATAGTTCTAATGATGCTAACAATGGGGAGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCGAAATTTTCATAGTTTaGACATCTCCACTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAEIFIV*TSPLAL
Trigger: GAGAGCCAGTGGAGATGTCCAAACTATGAAAATTTC...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCCTCCATATACCTTTTTaGCTGAAGAACCTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPALHIPF*LKNLSR
Trigger: TCTTGACAGGTTCTTCAGCCAAAAAGGTATATGGAG...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCACAGAGGAAAAGTTCTaGGCTTTTCAGACTTCCATA +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPATEEKF*AFQTSI
Trigger: TATGGAAGTCTGAAAAGCCCAGAACTTTTCCTCTGT...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR TCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCCTGTTTCTTCAGTTATaGTCTGGTTATGTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPALFLQL*SGYVLG
Trigger: TCCCAAAACATAACCAGATCATAACTGAAGAAACAG...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR TCA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTACTGTTGAGATGCCATaGAACGGTCGCTGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFTVEMP*NGRWVK
Trigger: CTTTACCCAGCGACCGTTTCATGGCATCTCAACAGT...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR TCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCATTAAAATTCCTCCATaGGACATACAGAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAIKIPP*DIQRFS
Trigger: AGAGAACCTCTGTATGTCTCATGGAGGAATTTTAAT...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR TCA 90 bp TGTGACCTTTGCACAGTCTTTTTAAGCGGCTGCCTAAACTGTGCCAAGCCACGTTATCCTTGGTCAGACTaGCCACCTGATGTGGTTAAC +
Preference number: 4 (lower is better)
Translates to: CDLCTVFLSGCLNCAKPRYPWSD*PPDVVN
Trigger: GTTAACCACATCAGGTGGTCAGTCTGACCAAGGATA...ACGTGGCTTGGCACAGTTTAGGCAGCCGCTTAAAAAGACTGTGCAAAGGTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR TCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCTTCAAGTCTCTGGACTaGTTACTGTTACTATCACTT +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAFKSLD*LLLLSL
Trigger: AAGTGATAGTAACAGTAATCAGTCCAGAGACTTGAA...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR GCA 90 bp TGTGACCTTTGCACAGTCTTTTTAAGCGGCTGCCTAAACTGTGCCAAGCCACGTCACTACTGCTGCTACTaGCAAGACTTGTGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: CDLCTVFLSGCLNCAKPRHYCCY*QDLCCS
Trigger: AGAGCAACACAAGTCTTGGCAGTAGCAGCAGTAGTG...ACGTGGCTTGGCACAGTTTAGGCAGCCGCTTAAAAAGACTGTGCAAAGGTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp AAGAATTTACTACAGAACCCAACGAGCCATGTGGCGAAGAACGCACCAGTGCTGCTACATCTCCACTACTaGTGCTACTGCCAAGACTTG +
Preference number: 4 (lower is better)
Translates to: KNLLQNPTSHVAKNAPVLLHLHY*CYCQDL
Trigger: CAAGTCTTGGCAGTAGCAGCAGTAGTGGAGATGTAG...CAGCACTGGTGCGTTCTTCGCCACATGGCTCGTTGGGTTCTGTAGTAAATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCCATTTGCCAATGGAATaGTTCCACTTTGTAAACTGT +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAHLPME*FHFVNC
Trigger: ACAGTTTACAAAGTGGAAGCATTCCATTGGCAAATG...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR GCA 90 bp TGTGACCTTTGCACAGTCTTTTTAAGCGGCTGCCTAAACTGTGCCAAGCCACGTGAACTTTCACAATACTaGTGCCCCATGCAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: CDLCTVFLSGCLNCAKPRELSQY*CPMQEV
Trigger: AACCTCCTGCATGGGGCAGCAGTATTGTGAAAGTTC...ACGTGGCTTGGCACAGTTTAGGCAGCCGCTTAAAAAGACTGTGCAAAGGTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CCA 90 bp TTGCCAATGGAATGCTTCCACTTTGTAAACTGTCACCAGAGGTACTTGGTTTCAACCCAACGAGCCATGTaGCGAAGAACGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: LPMECFHFVNCHQRYLVSTQRAM*RRTHQC
Trigger: GCACTGGTGCGTTCTTCGCCACATGGCTCGTTGGGT...TGAAACCAAGTACCTCTGGTGACAGTTTACAAAGTGGAAGCATTCCATTGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCTCTTCAGTTATGATCTaGTTATGTTTTGGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPASSVMI*LCFGKS
Trigger: GGACTTCCCAAAACATAACCAGATCATAACTGAAGA...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp TTTTTAAGCGGCTGCCTAAACTGTGCCAAGCCACGTACCACATTCCGTACCTTCTCATGGACTGACAGCTaGACAAGGATTCTCGGTCTT +
Preference number: 4 (lower is better)
Translates to: FLSGCLNCAKPRTTFRTFSWTDS*TRILGL
Trigger: AAGACCGAGAATCCTTGTCCAGCTGTCAGTCCATGA...GAAGGTACGGAATGTGGTACGTGGCTTGGCACAGTTTAGGCAGCCGCTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR CAA 72 bp CATGTGGCGAAGAACGCACCAGTGCTGACAAAGAAGTaGAACGTTCTTTATGAGTTCGAGAGGGGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: HVAKNAPVLTKK*NVLYEFERGFA
Trigger: AGCAAACCCCCTCTCGAACTCATAAAGAACGTTCAACTTCTTTGTCAGCACTGGTGCGTTCTTCGCCACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR TCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCTCTCCTGCCTCAGCCTaGGTAGCTGGGACTACAGTG +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLSPASA*VAGTTV
Trigger: CACTGTAGTCCCAGCTACTCAGGCTGAGGCAGGAGA...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR TCA 90 bp GCCTTGTGTGTCAACATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAATCTCCTGCCTCAGCCTaGGTAGCTGGGACTACAGTG +
Preference number: 4 (lower is better)
Translates to: ALCVNILVNLYLNERRSKSPASA*VAGTTV
Trigger: CACTGTAGTCCCAGCTACTCAGGCTGAGGCAGGAGA...TTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAATGTTGACACACAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380427.5
CDS-3UTR GCA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTCACTACTGCTGCTACTaGCAAGACTTGTGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFHYCCY*QDLCCS
Trigger: AGAGCAACACAAGTCTTGGCAGTAGCAGCAGTAGTG...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR GCA 90 bp TGTGACCTTTGCACAGTCTTTTTAAGCGGCTGCCTAAACTGTGCCAAGCCACGTCTGGATACAGGTTTGTaGTCCAAGGATTCATTTGCC +
Preference number: 4 (lower is better)
Translates to: CDLCTVFLSGCLNCAKPRLDTGL*SKDSFA
Trigger: GGCAAATGAATCCTTGGAGCACAAACCTGTATCCAG...ACGTGGCTTGGCACAGTTTAGGCAGCCGCTTAAAAAGACTGTGCAAAGGTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTCTGACGAAGACTGTGTaGTCCCCATTGTTAGCATCA +
Preference number: 4 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFLTKTV*SPLLAS
Trigger: TGATGCTAACAATGGGGAGCACACAGTCTTCGTCAG...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCATATGTATCTACTGTTaGAGTAGTTTTAGGTACGTC +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAICIYC*SSFRYV
Trigger: GACGTACCTAAAACTACTGCAACAGTAGATACATAT...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp GTGTGCTCCCCATTGTTAGCATCATTAGAACTATCCACACTACCGTGGCTCACCATCAGGAGGTGGCTCTaGCGGCATTATAAATACAGT +
Preference number: 4 (lower is better)
Translates to: VCSPLLASLELSTLPWLTIRRWL*RHYKYS
Trigger: ACTGTATTTATAATGCCGCCAGAGCCACCTCCTGAT...GGTGAGCCACGGTAGTGTGGATAGTTCTAATGATGCTAACAATGGGGAGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CCA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCCTTAAGGTCCAGTCTTaGAAAGTATTTGTAACTGTA +
Preference number: 4 (lower is better)
Translates to: GVISTHCSLCLSSSDSPALKVQS*KVFVTV
Trigger: TACAGTTACAAATACTTTCCAAGACTGGACCTTAAG...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTGGCTCAAGGAGTTCTTaGCTTTCCTCAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFGSRSS*LSSSIS
Trigger: AGAGATGCTTGAGGAAAGCCAAGAACTCCTTGAGCC...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR TCA 90 bp TGCCTGATGGTTTCTACTAAAGTGCTTGTTTCTTGTTGTTCCTCTGACAGGAGACCTGGACACTGCAGGTaGGCTCTTTTCACTTTCAGG +
Preference number: 4 (lower is better)
Translates to: CLMVSTKVLVSCCSSDRRPGHCR*ALFTFR
Trigger: CCTGAAAGTGAAAAGAGCTCACCTGCAGTGTCCAGG...TCTCCTGTCAGAGGAACAACAAGAAACAAGCACTTTAGTAGAAACCATCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR TCA 90 bp GCACACCTGTTTAGTTCTCTTAGCCATGAGAGGTGGACTCTTTGTAATGCTATTACTGGGGACCAACCCTaGGATACTTGTGTTAGGCGA +
Preference number: 4 (lower is better)
Translates to: AHLFSSLSHERWTLCNAITGDQP*DTCVRR
Trigger: TCGCCTAACACAAGTATCTCAGGGTTGGTCCCCAGT...AATAGCATTACAAAGAGTCCACCTCTCATGGCTAAGAGAACTAAACAGGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR TCA 90 bp ACATCAAATATACCAGACGGAACTTTCACAATACTGCTGCCCCATGCAGGAGGTGAAGGTCCAAACGTCTaGAATACCAAACGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: TSNIPDGTFTILLPHAGGEGPNV*NTKRGS
Trigger: GGAACCTCGTTTGGTATTTCAGACGTTTGGACCTTC...ACCTCCTGCATGGGGCAGCAGTATTGTGAAAGTTCCGTCTGGTATATTTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR TCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAATCTCCTGCCTCAGCCTaGGTAGCTGGGACTACAGTG +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKSPASA*VAGTTV
Trigger: CACTGTAGTCCCAGCTACTCAGGCTGAGGCAGGAGA...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR TCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGATCTCCTGCCTCAGCCTaGGTAGCTGGGACTACAGTG +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGSPASA*VAGTTV
Trigger: CACTGTAGTCCCAGCTACTCAGGCTGAGGCAGGAGA...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR TCA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTTCTCGGTCTTTGTGGTaGAGGAAAAGGGATGTTTTG +
Preference number: 4 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFSRSLW*RKRDVL
Trigger: CAAAACATCCCTTTTCCTTCACCACAAAGACCGAGA...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR TCA 90 bp GCACACCTGTTTAGTTCTCTTAGCCATGAGAGGTGGACTCTTTGTAATGCTATTGGTTCAGTAGGACTGTaGGGCTCTGGACTAGGTTGT +
Preference number: 4 (lower is better)
Translates to: AHLFSSLSHERWTLCNAIGSVGL*GSGLGC
Trigger: ACAACCTAGTCCAGAGCCTCACAGTCCTACTGAACC...AATAGCATTACAAAGAGTCCACCTCTCATGGCTAAGAGAACTAAACAGGTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR TCA 90 bp GGTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGCTCTGGCACCGGAGATaGTCTGTGCTCAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: GGASIFCNLSRISEDRLLLWHRR*SVLRIP
Trigger: TGGAATCCTGAGCACAGATCATCTCCGGTGCCAGAG...CAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR TCA 90 bp CCTGAGAGTATATTATCCAGCTTTAGCCCTGACAAAGAATTTACTACAGAACCCCTCTGGCACCGGAGATaGTCTGTGCTCAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: PESILSSFSPDKEFTTEPLWHRR*SVLRIP
Trigger: TGGAATCCTGAGCACAGATCATCTCCGGTGCCAGAG...GGGTTCTGTAGTAAATTCTTTGTCAGGGCTAAAGCTGGATAATATACTCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp AAGATTCAAGTTCTTTACGGAGTACTAGAGGACTCAAGTAGGGCACAGAAACAGGTTCGAGAGGGGGTTTaGTGCTTGAAACGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: KIQVLYGVLEDSSRAQKQVREGV*CLKRPV
Trigger: TACTGGGCGTTTCAAGCAGCAAACCCCCTCTCGAAC...CTGTTTCTGTGCCCTACTTGAGTCCTCTAGTACTCCGTAAAGAACTTGAATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp TGTGACCTTTGCACAGTCTTTTTAAGCGGCTGCCTAAACTGTGCCAAGCCACGTAGTCTTGCCCTTTCATaGCTCTTGGAAATGGAACTT +
Preference number: 4 (lower is better)
Translates to: CDLCTVFLSGCLNCAKPRSLALS*LLEMEL
Trigger: AAGTTCCATTTCCAAGAGGCATGAAAGGGCAAGACT...ACGTGGCTTGGCACAGTTTAGGCAGCCGCTTAAAAAGACTGTGCAAAGGTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAAGGCCTGAGCCACCGTaGCCGGCCATGTTGCTTTTA +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKRPEPP*PAMLLL
Trigger: TAAAAGCAACATGGCCGGGCACGGTGGCTCAGGCCT...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR GCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCGTGATCCACCCACCTTaGTCAGCCTCCCAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLVIHPP*SASQSA
Trigger: AGCACTTTGGGAGGCTGAGCAAGGTGGGTGGATCAC...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR GCA 90 bp TTGCCAATGGAATGCTTCCACTTTGTAAACTGTCACCAGAGGTACTTGGTTTCACGGCTGCCTAAACTGTaGCAAGCCACGTACCACATT +
Preference number: 4 (lower is better)
Translates to: LPMECFHFVNCHQRYLVSRLPKL*QATYHI
Trigger: AATGTGGTACGTGGCTTGGCACAGTTTAGGCAGCCG...TGAAACCAAGTACCTCTGGTGACAGTTTACAAAGTGGAAGCATTCCATTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTGAGAATCTTGGCATCTaGTCCCATCATGATAGCCAT +
Preference number: 4 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFENLGI*SHHDSH
Trigger: ATGGCTATCATGATGGGAGCAGATGCCAAGATTCTC...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR GCA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTAGGACATGTCAATGCTaGTGTGAGAATCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFRTCQC*CENLGI
Trigger: GATGCCAAGATTCTCACAGCAGCATTGACATGTCCT...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR GCA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTCTTAGGACATGTCAATaGTGCTGTGAGAATCTTGGC +
Preference number: 4 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFLRTCQ*CCENLG
Trigger: GCCAAGATTCTCACAGCAGCATTGACATGTCCTAAG...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR GCA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTGCTCAGGATTCCAAGTaGTTTCAGACATACAAGTCC +
Preference number: 4 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFAQDSK*FQTYKS
Trigger: GGACTTGTATGTCTGAAAGCACTTGGAATCCTGAGC...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAACCCAACGAGCCATGTaGCGAAGAACGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKTQRAM*RRTHQC
Trigger: GCACTGGTGCGTTCTTCGCCACATGGCTCGTTGGGT...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGACCCAACGAGCCATGTaGCGAAGAACGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: LVFKGQVYISQKENISPLTQRAM*RRTHQC
Trigger: GCACTGGTGCGTTCTTCGCCACATGGCTCGTTGGGT...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAACCCAACGAGCCATGTaGCGAAGAACGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGTQRAM*RRTHQC
Trigger: GCACTGGTGCGTTCTTCGCCACATGGCTCGTTGGGT...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTGACACTGGCACTTGGTaGAGCATCAATTTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFDTGTW*SINFLQ
Trigger: TTGCAGAAAATTGATGCTCCACCAAGTGCCAGTGTC...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CCA 90 bp GTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGTCTCAGCCTGAGTAGCTaGGACTACAGTGGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: VEHQFSATFQESLKTDYCLSLSS*DYSGAP
Trigger: AGGCGCACCACTGTAGTCCCAGCTACTCAGGCTGAG...ACAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380427.5
CDS-3UTR CCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGACTCAGCCTGAGTAGCTaGGACTACAGTGGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGLSLSS*DYSGAP
Trigger: AGGCGCACCACTGTAGTCCCAGCTACTCAGGCTGAG...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
3UTR CAA 72 bp CTCCAAAACACTTCCTGCACCACTCGACACTGGCACTaGGTGGAGCATCAATTTTCTGCAACCTTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: LQNTSCTTRHWH*VEHQFSATFQE
Trigger: TTCTTGAAAGGTTGCAGAAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR TCA 90 bp ACATCAAATATACCAGACGGAACTTTCACAATACTGCTGCCCCATGCAGGAGGTTGTGCTGGTGAACCATaGTCTAAAGGTAGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: TSNIPDGTFTILLPHAGGCAGEP*SKGRLD
Trigger: ATCAAGCCTACCTTTAGATCATGGTTCACCAGCACA...ACCTCCTGCATGGGGCAGCAGTATTGTGAAAGTTCCGTCTGGTATATTTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR TCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCACTGGGGACCAACCCTaGGATACTTGTGTTAGGCGA +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLTGDQP*DTCVRR
Trigger: TCGCCTAACACAAGTATCTCAGGGTTGGTCCCCAGT...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTAGCTGTATTCAAATTTaGGTCATCTGCTGTCCATCC +
Preference number: 4 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFSCIQI*VICCPS
Trigger: GGATGGACAGCAGATGACTCAAATTTGAATACAGCT...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR TCA 90 bp ATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAAACACTTCCTGCACCAGGTTCAGTAGGACTGTaGGGCTCTGGACTAGGTTGT +
Preference number: 4 (lower is better)
Translates to: ILVNLYLNERRSKTLPAPGSVGL*GSGLGC
Trigger: ACAACCTAGTCCAGAGCCTCACAGTCCTACTGAACC...TGGTGCAGGAAGTGTTTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR TCA 90 bp ACATCAAATATACCAGACGGAACTTTCACAATACTGCTGCCCCATGCAGGAGGTTCAACATCTTCCCTCTaGACCACCTTAGCAATACCA +
Preference number: 4 (lower is better)
Translates to: TSNIPDGTFTILLPHAGGSTSSL*TTLAIP
Trigger: TGGTATTGCTAAGGTGGTTCAGAGGGAAGATGTTGA...ACCTCCTGCATGGGGCAGCAGTATTGTGAAAGTTCCGTCTGGTATATTTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTACTGGCTACTGTCGCTaGTTGTTTCATACCAGATTT +
Preference number: 4 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFTGYCR*LFHTRF
Trigger: AAATCTGGTATGAAACAAGCAGCGACAGTAGCCAGT...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR GCA 90 bp GTGTGCTCCCCATTGTTAGCATCATTAGAACTATCCACACTACCGTGGCTCACCGAAGAGGCAAGAAGTTaGTTTTACAGAATGGACAAG +
Preference number: 4 (lower is better)
Translates to: VCSPLLASLELSTLPWLTEEARS*FYRMDK
Trigger: CTTGTCCATTCTGTAAAAGCAACTTCTTGCCTCTTC...GGTGAGCCACGGTAGTGTGGATAGTTCTAATGATGCTAACAATGGGGAGCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCCTCCAAAACACTTCCTaGACCACTCGACACTGGCAC +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLLQNTS*TTRHWH
Trigger: GTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGAG...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAGTGATCCACCCACCTTaGTCAGCCTCCCAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGVIHPP*SASQSA
Trigger: AGCACTTTGGGAGGCTGAGCAAGGTGGGTGGATCAC...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR GCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAGTATTTTCTGCTGCCTaGTCCTCTGTCAGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGVFSAA*SSVSAA
Trigger: GGCTGCGCTGACAGAGGAGCAGGCAGCAGAAAATAC...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATCTCAGCCTGAGTAGCTaGGACTACAGTGGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHLSLSS*DYSGAP
Trigger: AGGCGCACCACTGTAGTCCCAGCTACTCAGGCTGAG...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTAAATGTGCTTTTCAATaGGAAGAGGATGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFKCAFQ*EEDVVQ
Trigger: CTGGACCACATCCTCTTCCCATTGAAAAGCACATTT...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CCA 90 bp CCTGAGAGTATATTATCCAGCTTTAGCCCTGACAAAGAATTTACTACAGAACCCCCCAGTCAAGACAGCTaGCCTAAGAGAATGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PESILSSFSPDKEFTTEPPSQDS*PKRMQQ
Trigger: CTGCTGCATTCTCTTAGGCCAGCTGTCTTGACTGGG...GGGTTCTGTAGTAAATTCTTTGTCAGGGCTAAAGCTGGATAATATACTCTCAGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGACTATCCACACTACCGTaGCTCACCGTGTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGLSTLP*LTVSPS
Trigger: TGATGGGGACACGGTGAGCCACGGTAGTGTGGATAG...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000494124.2
3UTR CAA 72 bp AACAGCTACCCACATCTTACTGGCTACTGTCGCTGCTaGTTTCATACCAGATTTCAGGACATCTATCTTGGG +
Preference number: 4 (lower is better)
Translates to: NSYPHLTGYCRC*FHTRFQDIYLG
Trigger: CCCAAGATAGATGTCCTGAAATCTGGTATGAAACAAGCAGCGACAGTAGCCAGTAAGATGTGGGTAGCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR TCA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGCCTGGACACTGCAGGTaGGCTCTTTTCACTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LVFKGQVYISQKENISPLPGHCR*ALFTFR
Trigger: CCTGAAAGTGAAAAGAGCTCACCTGCAGTGTCCAGG...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR TCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGACCTGGACACTGCAGGTaGGCTCTTTTCACTTTCAGG +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGPGHCR*ALFTFR
Trigger: CCTGAAAGTGAAAAGAGCTCACCTGCAGTGTCCAGG...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGACTGGGGACCAACCCTaGGATACTTGTGTTAGGCGA +
Preference number: 4 (lower is better)
Translates to: LVFKGQVYISQKENISPLTGDQP*DTCVRR
Trigger: TCGCCTAACACAAGTATCTCAGGGTTGGTCCCCAGT...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR TCA 90 bp TTCCCAGTAGGGTGTCTACTAAAACAAAGTTTCAACTCCTGCGGTCTGTCAAAATGGAAGACTAACTGTTaGGATGCCATGAAACGGTCG +
Preference number: 4 (lower is better)
Translates to: FPVGCLLKQSFNSCGLSKWKTNC*DAMKRS
Trigger: CGACCGTTTCATGGCATCTCAACAGTTAGTCTTCCA...TTTTGACAGACCGCAGGAGTTGAAACTTTGTTTTAGTAGACACCCTACTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR TCA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTGTTCCTGATGAAGGTTaGTATTATCCCATAACAGCT +
Preference number: 4 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFVPDEG*YYPITA
Trigger: AGCTGTTATGGGATAATATCAACCTTCATCAGGAAC...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR TCA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTTTGAATGTTTCCAGATaGAATCTAATCCCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFLNVSR*NLIPKP
Trigger: AGGCTTGGGGATTAGATTTCATCTGGAAACATTCAA...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR TCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAGGTTCAGTAGGACTGTaGGGCTCTGGACTAGGTTGT +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGGSVGL*GSGLGC
Trigger: ACAACCTAGTCCAGAGCCTCACAGTCCTACTGAACC...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TTTTTAAGCGGCTGCCTAAACTGTGCCAAGCCACGTACCACATTCCGTACCTTCAGAAAACAGCACATTTaGTATACTACCAGTGCTACT +
Preference number: 4 (lower is better)
Translates to: FLSGCLNCAKPRTTFRTFRKQHI*YTTSAT
Trigger: AGTAGCACTGGTAGTATATCAAATGTGCTGTTTTCT...GAAGGTACGGAATGTGGTACGTGGCTTGGCACAGTTTAGGCAGCCGCTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR TCA 90 bp ACATCAAATATACCAGACGGAACTTTCACAATACTGCTGCCCCATGCAGGAGGTCTACTATCAGGTAGGTaGCAGCTAACATTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: TSNIPDGTFTILLPHAGGLLSGR*QLTFSK
Trigger: CTTTGAGAATGTTAGCTGTCACCTACCTGATAGTAG...ACCTCCTGCATGGGGCAGCAGTATTGTGAAAGTTCCGTCTGGTATATTTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR TCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATCTCTGGCACCGGAGATaGTCTGTGCTCAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHLWHRR*SVLRIP
Trigger: TGGAATCCTGAGCACAGATCATCTCCGGTGCCAGAG...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTCGAGAGGGGGTTTGCTaGTTGAAACGCCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGREGVC*LKRPVK
Trigger: TTTTACTGGGCGTTTCAAGCAGCAAACCCCCTCTCG...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR GCA 90 bp ATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAAACACTTCCTGCACCACGAGAGGGGGTTTGCTaGTTGAAACGCCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: ILVNLYLNERRSKTLPAPREGVC*LKRPVK
Trigger: TTTTACTGGGCGTTTCAAGCAGCAAACCCCCTCTCG...TGGTGCAGGAAGTGTTTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR GCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAGTTCGAGAGGGGGTTTaGTGCTTGAAACGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKVREGV*CLKRPV
Trigger: TACTGGGCGTTTCAAGCAGCAAACCCCCTCTCGAAC...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGGTTCGAGAGGGGGTTTaGTGCTTGAAACGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: LVFKGQVYISQKENISPLVREGV*CLKRPV
Trigger: TACTGGGCGTTTCAAGCAGCAAACCCCCTCTCGAAC...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR GCA 90 bp GTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGTGTTCGAGAGGGGGTTTaGTGCTTGAAACGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: VEHQFSATFQESLKTDYCVREGV*CLKRPV
Trigger: TACTGGGCGTTTCAAGCAGCAAACCCCCTCTCGAAC...ACAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR GCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAGTTCGAGAGGGGGTTTaGTGCTTGAAACGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGVREGV*CLKRPV
Trigger: TACTGGGCGTTTCAAGCAGCAAACCCCCTCTCGAAC...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp AAGAATTTACTACAGAACCCAACGAGCCATGTGGCGAAGAACGCACCAGTGCTGCATTTGCCAATGGAATaGTTCCACTTTGTAAACTGT +
Preference number: 4 (lower is better)
Translates to: KNLLQNPTSHVAKNAPVLHLPME*FHFVNC
Trigger: ACAGTTTACAAAGTGGAAGCATTCCATTGGCAAATG...CAGCACTGGTGCGTTCTTCGCCACATGGCTCGTTGGGTTCTGTAGTAAATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAACTCCAAAACACTTCCTaGACCACTCGACACTGGCAC +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKLQNTS*TTRHWH
Trigger: GTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGAG...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGAGGCCTGAGCCACCGTaGCCGGCCATGTTGCTTTTA +
Preference number: 4 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMRPEPP*PAMLLL
Trigger: TAAAAGCAACATGGCCGGGCACGGTGGCTCAGGCCT...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR GCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAAGGCCTGAGCCACCGTaGCCGGCCATGTTGCTTTTA +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRRPEPP*PAMLLL
Trigger: TAAAAGCAACATGGCCGGGCACGGTGGCTCAGGCCT...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR GCA 90 bp GCACACCTGTTTAGTTCTCTTAGCCATGAGAGGTGGACTCTTTGTAATGCTATTAAAGAGCAGCAGTGTTaGACAATTCTCAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: AHLFSSLSHERWTLCNAIKEQQC*TILRTQ
Trigger: CTGGGTCCTGAGAATTGTGCAACACTGCTGCTCTTT...AATAGCATTACAAAGAGTCCACCTCTCATGGCTAAGAGAACTAAACAGGTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp TTGCCAATGGAATGCTTCCACTTTGTAAACTGTCACCAGAGGTACTTGGTTTCAGAGACCTGTGACCTTTaGACAGTCTTTTTAAGCGGC +
Preference number: 4 (lower is better)
Translates to: LPMECFHFVNCHQRYLVSETCDL*TVFLSG
Trigger: GCCGCTTAAAAAGACTGTGCAAAGGTCACAGGTCTC...TGAAACCAAGTACCTCTGGTGACAGTTTACAAAGTGGAAGCATTCCATTGGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp TGTGACCTTTGCACAGTCTTTTTAAGCGGCTGCCTAAACTGTGCCAAGCCACGTTATCTGTTTTCTCTGTaGCTTTATCAGGAAACAACC +
Preference number: 4 (lower is better)
Translates to: CDLCTVFLSGCLNCAKPRYLFSL*LYQETT
Trigger: GGTTGTTTCCTGATAAAGGCACAGAGAAAACAGATA...ACGTGGCTTGGCACAGTTTAGGCAGCCGCTTAAAAAGACTGTGCAAAGGTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTACCCAACGAGCCATGTaGCGAAGAACGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTITQRAM*RRTHQC
Trigger: GCACTGGTGCGTTCTTCGCCACATGGCTCGTTGGGT...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTGCCAATGGAATGCTTCCACTTTGTAAACTGTCACCAGAGGTACTTGGTTTCACTACCCACATCTTACTaGCTACTGTCGCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: LPMECFHFVNCHQRYLVSLPTSY*LLSLLV
Trigger: AACAAGCAGCGACAGTAGCCAGTAAGATGTGGGTAG...TGAAACCAAGTACCTCTGGTGACAGTTTACAAAGTGGAAGCATTCCATTGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CCA 90 bp GGTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGAGACTTGTGTTGCTCTaGGTAAGTTCACTGGGGACC +
Preference number: 4 (lower is better)
Translates to: GGASIFCNLSRISEDRLLRLVLL*VSSLGT
Trigger: GGTCCCCAGTGAACTTACCCAGAGCAACACAAGTCT...CAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CCA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTAGACTTGTGTTGCTCTaGGTAAGTTCACTGGGGACC +
Preference number: 4 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGRLVLL*VSSLGT
Trigger: GGTCCCCAGTGAACTTACCCAGAGCAACACAAGTCT...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR CCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAATGCACCACTCGACACTaGCACTTGGTGGAGCATCAA +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKCTTRH*HLVEHQ
Trigger: TTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCA...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTAATATTAATGCATCATaGACTGACAGCTGGACAAGG +
Preference number: 4 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFNINAS*TDSWTR
Trigger: CCTTGTCCAGCTGTCAGTCCATGATGCATTAATATT...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCGGAGAGCTGATGGAGTaGCTTCTACACAGGTGTAAC +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLGELME*LLHRCN
Trigger: GTTACACCTGTGTAGAAGCCACTCCATCAGCTCTCC...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCAGCGACCATAGGGTGTaGCTAGGATCACTTCACATC +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLSDHRV*LGSLHI
Trigger: GATGTGAAGTGATCCTAGCCACACCCTATGGTCGCT...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCATTCTGGGGTCGAACTaGAGGAGCCCTTCGATAAGT +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLILGSN*RSPSIS
Trigger: ACTTATCGAAGGGCTCCTCCAGTTCGACCCCAGAAT...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
3UTR CAA 72 bp CTGATTAAATCTCTGACGAAGACTGTGTGCTCCCCATaGTTAGCATCATTAGAACTATCCACACTACCGTGG +
Preference number: 4 (lower is better)
Translates to: LIKSLTKTVCSP*LASLELSTLPW
Trigger: CCACGGTAGTGTGGATAGTTCTAATGATGCTAACAATGGGGAGCACACAGTCTTCGTCAGAGATTTAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR CAA 72 bp GAAGTCTTAGGACATGTCAATGCTGCTGTGAGAATCTaGGCATCTGCTCCCATCATGATAGCCATTTCACTT +
Preference number: 4 (lower is better)
Translates to: EVLGHVNAAVRI*ASAPIMIAISL
Trigger: AAGTGAAATGGCTATCATGATGGGAGCAGATGCCAAGATTCTCACAGCAGCATTGACATGTCCTAAGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR CAA 72 bp GCTGCTTGTTTCATACCAGATTTCAGGACATCTATCTaGGGCCCTGAGAGTATATTATCCAGCTTTAGCCCT +
Preference number: 4 (lower is better)
Translates to: AACFIPDFRTSI*GPESILSSFSP
Trigger: AGGGCTAAAGCTGGATAATATACTCTCAGGGCCCAAGATAGATGTCCTGAAATCTGGTATGAAACAAGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR TCA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTGTTGAACGTTCTTTATaGGTTCGAGAGGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGVERSL*VREGVC
Trigger: GCAAACCCCCTCTCGAACTCATAAAGAACGTTCAAC...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR TCA 90 bp GTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGTACTGTTGAGATGCCATaGAACGGTCGCTGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: VEHQFSATFQESLKTDYCTVEMP*NGRWVK
Trigger: CTTTACCCAGCGACCGTTTCATGGCATCTCAACAGT...ACAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR TCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAACTGTTGAGATGCCATaGAACGGTCGCTGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGTVEMP*NGRWVK
Trigger: CTTTACCCAGCGACCGTTTCATGGCATCTCAACAGT...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCTGGAAGACTAACTGTTaGGATGCCATGAAACGGTCG +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLWKTNC*DAMKRS
Trigger: CGACCGTTTCATGGCATCTCAACAGTTAGTCTTCCA...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp GGTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGGAAGGTCCAAACGTCTaGAATACCAAACGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: GGASIFCNLSRISEDRLLEGPNV*NTKRGS
Trigger: GGAACCTCGTTTGGTATTTCAGACGTTTGGACCTTC...CAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR TCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAGCACTGCAGCCAGTaGAAGAGGACAAAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGKHCSQ*KRTKGN
Trigger: ATTCCCCTTTGTCCTCTTTCACTGGCTGCAGTGCTT...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTAGAAAACAGCACATTTaGTATACTACCAGTGCTACT +
Preference number: 4 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFRKQHI*YTTSAT
Trigger: AGTAGCACTGGTAGTATATCAAATGTGCTGTTTTCT...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR TCA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTATGTCAATGCTGCTGTaGGAATCTTGGCATCTGCTC +
Preference number: 4 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGMSMLL*ESWHLL
Trigger: GAGCAGATGCCAAGATTCTCACAGCAGCATTGACAT...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR TCA 90 bp GATTTTTCAAAGTCTTGCCCTTTCATGCCTCTTGGAAATGGAACTTCACCTGTTATGTCAATGCTGCTGTaGGAATCTTGGCATCTGCTC +
Preference number: 4 (lower is better)
Translates to: DFSKSCPFMPLGNGTSPVMSMLL*ESWHLL
Trigger: GAGCAGATGCCAAGATTCTCACAGCAGCATTGACAT...AACAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGGCAAGACTTTGAAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR TCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGACTCTGGCACCGGAGATaGTCTGTGCTCAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRLWHRR*SVLRIP
Trigger: TGGAATCCTGAGCACAGATCATCTCCGGTGCCAGAG...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATGTTCGAGAGGGGGTTTaGTGCTTGAAACGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHVREGV*CLKRPV
Trigger: TACTGGGCGTTTCAAGCAGCAAACCCCCTCTCGAAC...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTCATCTCCACTACTGCTaGTACTGCCAAGACTTGTGT +
Preference number: 4 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGHLHYC*YCQDLC
Trigger: ACACAAGTCTTGGCAGTAGCAGCAGTAGTGGAGATG...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR GCA 90 bp GGTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGCATCTCCACTACTGCTaGTACTGCCAAGACTTGTGT +
Preference number: 4 (lower is better)
Translates to: GGASIFCNLSRISEDRLLHLHYC*YCQDLC
Trigger: ACACAAGTCTTGGCAGTAGCAGCAGTAGTGGAGATG...CAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR GCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCCATCTCCACTACTGCTaGTACTGCCAAGACTTGTGT +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLHLHYC*YCQDLC
Trigger: ACACAAGTCTTGGCAGTAGCAGCAGTAGTGGAGATG...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp CCTGAGAGTATATTATCCAGCTTTAGCCCTGACAAAGAATTTACTACAGAACCCCATCTCCACTACTGCTaGTACTGCCAAGACTTGTGT +
Preference number: 4 (lower is better)
Translates to: PESILSSFSPDKEFTTEPHLHYC*YCQDLC
Trigger: ACACAAGTCTTGGCAGTAGCAGCAGTAGTGGAGATG...GGGTTCTGTAGTAAATTCTTTGTCAGGGCTAAAGCTGGATAATATACTCTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTCTACATCTCCACTACTaGTGCTACTGCCAAGACTTG +
Preference number: 4 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGLHLHY*CYCQDL
Trigger: CAAGTCTTGGCAGTAGCAGCAGTAGTGGAGATGTAG...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR GCA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTCATCAAAACCTCCATTaGACAATTCTGATAGATGCT +
Preference number: 4 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFHQNLH*TILIDA
Trigger: AGCATCTATCAGAATTGTGCAATGGAGGTTTTGATG...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR GCA 90 bp CCTGAGAGTATATTATCCAGCTTTAGCCCTGACAAAGAATTTACTACAGAACCCGTCTTTTTAAGCGGCTaGCTAAACTGTGCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: PESILSSFSPDKEFTTEPVFLSG*LNCAKP
Trigger: TGGCTTGGCACAGTTTAGGCAGCCGCTTAAAAAGAC...GGGTTCTGTAGTAAATTCTTTGTCAGGGCTAAAGCTGGATAATATACTCTCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCCTGACGAAGACTGTGTaGTCCCCATTGTTAGCATCA +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLLTKTV*SPLLAS
Trigger: TGATGCTAACAATGGGGAGCACACAGTCTTCGTCAG...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000494124.2
CDS-3UTR GCA 90 bp TTTTTAAGCGGCTGCCTAAACTGTGCCAAGCCACGTACCACATTCCGTACCTTCAGGCACATGAATTTCTaGATCATCCTTTATAAGTTC +
Preference number: 4 (lower is better)
Translates to: FLSGCLNCAKPRTTFRTFRHMNF*IILYKF
Trigger: GAACTTATAAAGGATGATGCAGAAATTCATGTGCCT...GAAGGTACGGAATGTGGTACGTGGCTTGGCACAGTTTAGGCAGCCGCTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCACCGGAGATGATCTGTaGTCAGGATTCCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLTGDDL*SGFQVL
Trigger: AAGCACTTGGAATCCTGAGCACAGATCATCTCCGGT...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp GATTTTTCAAAGTCTTGCCCTTTCATGCCTCTTGGAAATGGAACTTCACCTGTTACCGGAGATGATCTGTaGTCAGGATTCCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: DFSKSCPFMPLGNGTSPVTGDDL*SGFQVL
Trigger: AAGCACTTGGAATCCTGAGCACAGATCATCTCCGGT...AACAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGGCAAGACTTTGAAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp GTGTGCTCCCCATTGTTAGCATCATTAGAACTATCCACACTACCGTGGCTCACCATATGTATCTACTGTTaGAGTAGTTTTAGGTACGTC +
Preference number: 4 (lower is better)
Translates to: VCSPLLASLELSTLPWLTICIYC*SSFRYV
Trigger: GACGTACCTAAAACTACTGCAACAGTAGATACATAT...GGTGAGCCACGGTAGTGTGGATAGTTCTAATGATGCTAACAATGGGGAGCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTGTATTTTCTGCTGCCTaGTCCTCTGTCAGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIVFSAA*SSVSAA
Trigger: GGCTGCGCTGACAGAGGAGCAGGCAGCAGAAAATAC...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGAGACTTGTGTTGCTCTaGGTAAGTTCACTGGGGACC +
Preference number: 4 (lower is better)
Translates to: LVFKGQVYISQKENISPLRLVLL*VSSLGT
Trigger: GGTCCCCAGTGAACTTACCCAGAGCAACACAAGTCT...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CCA 90 bp AAGATTCAAGTTCTTTACGGAGTACTAGAGGACTCAAGTAGGGCACAGAAACAGTGTGAGGATAAGTCCTaGCAAGTTACTAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: KIQVLYGVLEDSSRAQKQCEDKS*QVTRKV
Trigger: GACCTTCCTAGTAACTTGCCAGGACTTATCCTCACA...CTGTTTCTGTGCCCTACTTGAGTCCTCTAGTACTCCGTAAAGAACTTGAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CCA 90 bp TGCCTGATGGTTTCTACTAAAGTGCTTGTTTCTTGTTGTTCCTCTGACAGGAGAACAAGTTTGCTATCCTaGGACAGAGATGACAGAGGA +
Preference number: 4 (lower is better)
Translates to: CLMVSTKVLVSCCSSDRRTSLLS*DRDDRG
Trigger: TCCTCTGTCATCTCTGTCCCAGGATAGCAAACTTGT...TCTCCTGTCAGAGGAACAACAAGAAACAAGCACTTTAGTAGAAACCATCAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CCA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTCTCGACACTGGCACTTaGTGGAGCATCAATTTTCTG +
Preference number: 4 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGLDTGT*WSINFL
Trigger: CAGAAAATTGATGCTCCACCAAGTGCCAGTGTCGAG...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR CCA 90 bp GGTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGTCCATCATCAGGAGGTaGCTCTGGCGGCATTATAAA +
Preference number: 4 (lower is better)
Translates to: GGASIFCNLSRISEDRLLSIIRR*LWRHYK
Trigger: TTTATAATGCCGCCAGAGCCACCTCCTGATGATGGA...CAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTCTATCCACACTACCGTaGCTCACCGTGTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTILSTLP*LTVSPS
Trigger: TGATGGGGACACGGTGAGCCACGGTAGTGTGGATAG...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000494124.2
CDS-3UTR CCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCGGCTCAAGGAGTTCTTaGCTTTCCTCAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLGSRSS*LSSSIS
Trigger: AGAGATGCTTGAGGAAAGCCAAGAACTCCTTGAGCC...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAGACACGGCTTCTTCCTaGGGCAAGAAAGCACCGGAT +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRDTASS*GKKAPD
Trigger: ATCCGGTGCTTTCTTGCCCCAGGAAGAAGCCGTGTC...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTGACACGGCTTCTTCCTaGGGCAAGAAAGCACCGGAT +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIDTASS*GKKAPD
Trigger: ATCCGGTGCTTTCTTGCCCCAGGAAGAAGCCGTGTC...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAATTCTGGGGTCGAACTaGAGGAGCCCTTCGATAAGT +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKILGSN*RSPSIS
Trigger: ACTTATCGAAGGGCTCCTCCAGTTCGACCCCAGAAT...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGACAGCCAAGGAATTCTaGGGTCGAACTGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMTAKEF*GRTGGA
Trigger: GGCTCCTCCAGTTCGACCCCAGAATTCCTTGGCTGT...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR TCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTCCTGGACACTGCAGGTaGGCTCTTTTCACTTTCAGG +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIPGHCR*ALFTFR
Trigger: CCTGAAAGTGAAAAGAGCTCACCTGCAGTGTCCAGG...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGGTTGAACGTTCTTTATaGGTTCGAGAGGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: LVFKGQVYISQKENISPLVERSL*VREGVC
Trigger: GCAAACCCCCTCTCGAACTCATAAAGAACGTTCAAC...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR TCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAGTTGAACGTTCTTTATaGGTTCGAGAGGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGVERSL*VREGVC
Trigger: GCAAACCCCCTCTCGAACTCATAAAGAACGTTCAAC...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGACTGGGGACCAACCCTaGGATACTTGTGTTAGGCGA +
Preference number: 4 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMTGDQP*DTCVRR
Trigger: TCGCCTAACACAAGTATCTCAGGGTTGGTCCCCAGT...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR TCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAGAAGGTCCAAACGTCTaGAATACCAAACGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKEGPNV*NTKRGS
Trigger: GGAACCTCGTTTGGTATTTCAGACGTTTGGACCTTC...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAGAAGGTCCAAACGTCTaGAATACCAAACGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGEGPNV*NTKRGS
Trigger: GGAACCTCGTTTGGTATTTCAGACGTTTGGACCTTC...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp GGTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGGCTGAATACTCTGCCTaGTGGTTTCTACTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: GGASIFCNLSRISEDRLLAEYSA*WFLLKC
Trigger: GCACTTTAGTAGAAACCATCAGGCAGAGTATTCAGC...CAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR TCA 90 bp ATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAAACACTTCCTGCACCAGCTGAATACTCTGCCTaGTGGTTTCTACTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: ILVNLYLNERRSKTLPAPAEYSA*WFLLKC
Trigger: GCACTTTAGTAGAAACCATCAGGCAGAGTATTCAGC...TGGTGCAGGAAGTGTTTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR TCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCTCTCGGTCTTTGTGGTaGAGGAAAAGGGATGTTTTG +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLSRSLW*RKRDVL
Trigger: CAAAACATCCCTTTTCCTTCACCACAAAGACCGAGA...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATAAGCACTGCAGCCAGTaGAAGAGGACAAAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHKHCSQ*KRTKGN
Trigger: ATTCCCCTTTGTCCTCTTTCACTGGCTGCAGTGCTT...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAACTGTCGGTCAAACAATaGATCAGCAGCTGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKLSVKQ*ISSCGF
Trigger: AAAGCCACAGCTGCTGATTCATTGTTTGACCGACAG...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCACATCATATGCCTGCTaGAGTGCTCTGACTTTAGGA +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLTSYAC*SALTLG
Trigger: TCCTAAAGTCAGAGCACTTCAGCAGGCATATGATGT...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR TCA 90 bp CCTGAGAGTATATTATCCAGCTTTAGCCCTGACAAAGAATTTACTACAGAACCCCTGTCTGTGCTAGAGTaGTTATCAATGGACTCAAGC +
Preference number: 4 (lower is better)
Translates to: PESILSSFSPDKEFTTEPLSVLE*LSMDSS
Trigger: GCTTGAGTCCATTGATAATCACTCTAGCACAGACAG...GGGTTCTGTAGTAAATTCTTTGTCAGGGCTAAAGCTGGATAATATACTCTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR TCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCTCAACATCTTCCCTCTaGACCACCTTAGCAATACCA +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLSTSSL*TTLAIP
Trigger: TGGTATTGCTAAGGTGGTTCAGAGGGAAGATGTTGA...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTTCAACATCTTCCCTCTaGACCACCTTAGCAATACCA +
Preference number: 4 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGSTSSL*TTLAIP
Trigger: TGGTATTGCTAAGGTGGTTCAGAGGGAAGATGTTGA...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR GCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCCTGGATACAGGTTTGTaGTCCAAGGATTCATTTGCC +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLLDTGL*SKDSFA
Trigger: GGCAAATGAATCCTTGGAGCACAAACCTGTATCCAG...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TTCCCAGTAGGGTGTCTACTAAAACAAAGTTTCAACTCCTGCGGTCTGTCAAAAATCACTTGGTTCAACTaGAGAGCCTGTTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: FPVGCLLKQSFNSCGLSKITWFN*RACFFS
Trigger: ACTGAAGAAACAGGCTCTGCAGTTGAACCAAGTGAT...TTTTGACAGACCGCAGGAGTTGAAACTTTGTTTTAGTAGACACCCTACTGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp GCACACCTGTTTAGTTCTCTTAGCCATGAGAGGTGGACTCTTTGTAATGCTATTGTAAAGTCAATATTCTaGAATGGGCCTCCAACACTG +
Preference number: 4 (lower is better)
Translates to: AHLFSSLSHERWTLCNAIVKSIF*NGPPTL
Trigger: CAGTGTTGGAGGCCCATTGCAGAATATTGACTTTAC...AATAGCATTACAAAGAGTCCACCTCTCATGGCTAAGAGAACTAAACAGGTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTGTCAACAAGCCCAGGTaGATAAGCTGTTTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGVNKPR*ISCFSD
Trigger: ATCAGAGAAACAGCTTATGCACCTGGGCTTGTTGAC...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR GCA 90 bp AAGATTCAAGTTCTTTACGGAGTACTAGAGGACTCAAGTAGGGCACAGAAACAGGCTGGCCTAAGAGAATaGAGCAGAATTTTACTCTCA +
Preference number: 4 (lower is better)
Translates to: KIQVLYGVLEDSSRAQKQAGLRE*SRILLS
Trigger: TGAGAGTAAAATTCTGCTGCATTCTCTTAGGCCAGC...CTGTTTCTGTGCCCTACTTGAGTCCTCTAGTACTCCGTAAAGAACTTGAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGACGGCTGCCTAAACTGTaGCAAGCCACGTACCACATT +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRRLPKL*QATYHI
Trigger: AATGTGGTACGTGGCTTGGCACAGTTTAGGCAGCCG...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTCGGCTGCCTAAACTGTaGCAAGCCACGTACCACATT +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIRLPKL*QATYHI
Trigger: AATGTGGTACGTGGCTTGGCACAGTTTAGGCAGCCG...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp ATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAAACACTTCCTGCACCAAGCTTCGCCAAAGACTaGATCTTCAACTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: ILVNLYLNERRSKTLPAPSFAKD*IFNWIL
Trigger: CAAGATCCAGTTGAAGATGCAGTCTTTGGCGAAGCT...TGGTGCAGGAAGTGTTTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR GCA 90 bp GGTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGGAGAATCTTGGCATCTaGTCCCATCATGATAGCCAT +
Preference number: 4 (lower is better)
Translates to: GGASIFCNLSRISEDRLLENLGI*SHHDSH
Trigger: ATGGCTATCATGATGGGAGCAGATGCCAAGATTCTC...CAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR GCA 90 bp GATTTTTCAAAGTCTTGCCCTTTCATGCCTCTTGGAAATGGAACTTCACCTGTTAGGACATGTCAATGCTaGTGTGAGAATCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: DFSKSCPFMPLGNGTSPVRTCQC*CENLGI
Trigger: GATGCCAAGATTCTCACAGCAGCATTGACATGTCCT...AACAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGGCAAGACTTTGAAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATTACTGTATTTTCTGCTaGCTGCTCCTCTGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHYCIFC*LLLCQR
Trigger: GCGCTGACAGAGGAGCAGGCAGCAGAAAATACAGTA...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR GCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAATGCTACTGTATTTTCTaGTGCCTGCTCCTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKCYCIF*CLLLCQ
Trigger: CTGACAGAGGAGCAGGCAGCAGAAAATACAGTAGCA...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCCCCTTTCATGCCTCTTaGAAATGGAACTTCACCTGT +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLPFHAS*KWNFTC
Trigger: ACAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGG...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp ATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAAACACTTCCTGCACCAGTCACCAGAGGTACTTaGTTTCAGGAAAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: ILVNLYLNERRSKTLPAPVTRGT*FQEKAC
Trigger: GCAAGCTTTTTCCTGAAACCAAGTACCTCTGGTGAC...TGGTGCAGGAAGTGTTTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CCA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTGATCTGGTTATGTTTTaGGAAGTCCATAAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFDLVMF*EVHKVD
Trigger: ATCAACTTTATGGACTTCCCAAAACATAACCAGATC...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCTGTGAGGATAAGTCCTaGCAAGTTACTAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLCEDKS*QVTRKV
Trigger: GACCTTCCTAGTAACTTGCCAGGACTTATCCTCACA...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCGACACTGGCACTTGGTaGAGCATCAATTTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLDTGTW*SINFLQ
Trigger: TTGCAGAAAATTGATGCTCCACCAAGTGCCAGTGTC...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAACTCGACACTGGCACTTaGTGGAGCATCAATTTTCTG +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKLDTGT*WSINFL
Trigger: CAGAAAATTGATGCTCCACCAAGTGCCAGTGTCGAG...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGTGCACCACTCGACACTaGCACTTGGTGGAGCATCAA +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRCTTRH*HLVEHQ
Trigger: TTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCA...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGTGCACCACTCGACACTaGCACTTGGTGGAGCATCAA +
Preference number: 4 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMCTTRH*HLVEHQ
Trigger: TTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCA...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR CCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATGCACCACTCGACACTaGCACTTGGTGGAGCATCAA +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRCTTRH*HLVEHQ
Trigger: TTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCA...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp GGTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGCTGGAAGTGGATATTTaGTTTCAGGATCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: GGASIFCNLSRISEDRLLLEVDI*FQDPST
Trigger: AGTGCTGGGATCCTGAAACCAAATATCCACTTCCAG...CAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGATCATGGACTGACAGCTaGACAAGGATTCTCGGTCTT +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGSWTDS*TRILGL
Trigger: AAGACCGAGAATCCTTGTCCAGCTGTCAGTCCATGA...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGCCCAGTCAAGACAGCTaGCCTAAGAGAATGCAGCAG +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRPSQDS*PKRMQQ
Trigger: CTGCTGCATTCTCTTAGGCCAGCTGTCTTGACTGGG...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAATCCATCATCAGGAGGTaGCTCTGGCGGCATTATAAA +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKSIIRR*LWRHYK
Trigger: TTTATAATGCCGCCAGAGCCACCTCCTGATGATGGA...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp AAGATTCAAGTTCTTTACGGAGTACTAGAGGACTCAAGTAGGGCACAGAAACAGACTGACCACCTGATGTaGTTAACATTCAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: KIQVLYGVLEDSSRAQKQTDHLM*LTFKGR
Trigger: TCTACCCTTGAATGTTAACCACATCAGGTGGTCAGT...CTGTTTCTGTGCCCTACTTGAGTCCTCTAGTACTCCGTAAAGAACTTGAATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CCA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTTATTCCTCAGATCTTTaGATACTGTTTTCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFYSSDL*ILFSSL
Trigger: GAGACTTGAAAACAGTATCCAAAGATCTGAGGAATA...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATAGCGACCATAGGGTGTaGCTAGGATCACTTCACATC +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHSDHRV*LGSLHI
Trigger: GATGTGAAGTGATCCTAGCCACACCCTATGGTCGCT...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
3UTR CAA 72 bp GAATGCTTCCACTTTGTAAACTGTCACCAGAGGTACTaGGTTTCAGGAAAAAGCTTGCAGAACCTCTCAAAT +
Preference number: 4 (lower is better)
Translates to: ECFHFVNCHQRY*VSGKSLQNLSN
Trigger: ATTTGAGAGGTTCTGCAAGCTTTTTCCTGAAACCAAGTACCTCTGGTGACAGTTTACAAAGTGGAAGCATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR CAA 72 bp CTAAACTGGATACAGGTTTGTGCTCCAAGGATTCATTaGCCAATGGAATGCTTCCACTTTGTAAACTGTCAC +
Preference number: 4 (lower is better)
Translates to: LNWIQVCAPRIH*PMECFHFVNCH
Trigger: GTGACAGTTTACAAAGTGGAAGCATTCCATTGGCAAATGAATCCTTGGAGCACAAACCTGTATCCAGTTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
3UTR CAA 72 bp TTGATCAAGTCAGGTTCTGCTAAACTGGATACAGGTTaGTGCTCCAAGGATTCATTTGCCAATGGAATGCTT +
Preference number: 4 (lower is better)
Translates to: LIKSGSAKLDTG*CSKDSFANGML
Trigger: AAGCATTCCATTGGCAAATGAATCCTTGGAGCACAAACCTGTATCCAGTTTAGCAGAACCTGACTTGATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR TCA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTCTCCTCTCTAGAGCATaGATAAATGCAGTAGTCATG +
Preference number: 4 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGLLSRA*INAVVM
Trigger: CATGACTACTGCATTTATTCATGCTCTAGAGAGGAG...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR TCA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGTGTGCTGGTGAACCATaGTCTAAAGGTAGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: LVFKGQVYISQKENISPLCAGEP*SKGRLD
Trigger: ATCAAGCCTACCTTTAGATCATGGTTCACCAGCACA...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR TCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAATGTGCTGGTGAACCATaGTCTAAAGGTAGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKCAGEP*SKGRLD
Trigger: ATCAAGCCTACCTTTAGATCATGGTTCACCAGCACA...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATGTTGAACGTTCTTTATaGGTTCGAGAGGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHVERSL*VREGVC
Trigger: GCAAACCCCCTCTCGAACTCATAAAGAACGTTCAAC...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp AAGATTCAAGTTCTTTACGGAGTACTAGAGGACTCAAGTAGGGCACAGAAACAGAGAAGAACCATGATCTaGTTTTTCAAAGTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: KIQVLYGVLEDSSRAQKQRRTMI*FFKVLP
Trigger: GGGCAAGACTTTGAAAAATCAGATCATGGTTCTTCT...CTGTTTCTGTGCCCTACTTGAGTCCTCTAGTACTCCGTAAAGAACTTGAATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR TCA 90 bp GCCTTGTGTGTCAACATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAAAGCTGTATTCAAATTTaGGTCATCTGCTGTCCATCC +
Preference number: 4 (lower is better)
Translates to: ALCVNILVNLYLNERRSKSCIQI*VICCPS
Trigger: GGATGGACAGCAGATGACTCAAATTTGAATACAGCT...TTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAATGTTGACACACAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR TCA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGACTGTTGAGATGCCATaGAACGGTCGCTGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMTVEMP*NGRWVK
Trigger: CTTTACCCAGCGACCGTTTCATGGCATCTCAACAGT...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR TCA 90 bp AAGATTCAAGTTCTTTACGGAGTACTAGAGGACTCAAGTAGGGCACAGAAACAGAGAACATTATTGTGCTaGATACTCTGCCTGATGGTT +
Preference number: 4 (lower is better)
Translates to: KIQVLYGVLEDSSRAQKQRTLLC*ILCLMV
Trigger: AACCATCAGGCAGAGTATTCAGCACAATAATGTTCT...CTGTTTCTGTGCCCTACTTGAGTCCTCTAGTACTCCGTAAAGAACTTGAATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR TCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAAAGCACTGCAGCCAGTaGAAGAGGACAAAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRKHCSQ*KRTKGN
Trigger: ATTCCCCTTTGTCCTCTTTCACTGGCTGCAGTGCTT...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATCTGTCGGTCAAACAATaGATCAGCAGCTGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHLSVKQ*ISSCGF
Trigger: AAAGCCACAGCTGCTGATTCATTGTTTGACCGACAG...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATATGTCAATGCTGCTGTaGGAATCTTGGCATCTGCTC +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHMSMLL*ESWHLL
Trigger: GAGCAGATGCCAAGATTCTCACAGCAGCATTGACAT...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCCTACTATCAGGTAGGTaGCAGCTAACATTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLLLSGR*QLTFSK
Trigger: CTTTGAGAATGTTAGCTGTCACCTACCTGATAGTAG...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp GTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGTCCACCTGTGACATTTTaGAGAGCTGATATTGAGGAG +
Preference number: 4 (lower is better)
Translates to: VEHQFSATFQESLKTDYCPPVTF*RADIEE
Trigger: CTCCTCAATATCAGCTCTTCAAAATGTCACAGGTGG...ACAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTCGAGAGGGGGTTTGCTaGTTGAAACGCCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: LNARTYAYMSQVVFRDRIREGVC*LKRPVK
Trigger: TTTTACTGGGCGTTTCAAGCAGCAAACCCCCTCTCG...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR GCA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGCGAGAGGGGGTTTGCTaGTTGAAACGCCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMREGVC*LKRPVK
Trigger: TTTTACTGGGCGTTTCAAGCAGCAAACCCCCTCTCG...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR GCA 90 bp GATTTTTCAAAGTCTTGCCCTTTCATGCCTCTTGGAAATGGAACTTCACCTGTTACTGGCTACTGTCGCTaGTTGTTTCATACCAGATTT +
Preference number: 4 (lower is better)
Translates to: DFSKSCPFMPLGNGTSPVTGYCR*LFHTRF
Trigger: AAATCTGGTATGAAACAAGCAGCGACAGTAGCCAGT...AACAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGGCAAGACTTTGAAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATCTACATCTCCACTACTaGTGCTACTGCCAAGACTTG +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHLHLHY*CYCQDL
Trigger: CAAGTCTTGGCAGTAGCAGCAGTAGTGGAGATGTAG...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCAGTCTTGCCCTTTCATaGCTCTTGGAAATGGAACTT +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLSLALS*LLEMEL
Trigger: AAGTTCCATTTCCAAGAGGCATGAAAGGGCAAGACT...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCCTCCAAGGATTCATTTaGCAATGGAATGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLLQGFI*QWNAST
Trigger: AGTGGAAGCATTCCATTGGCAAATGAATCCTTGGAG...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAACTGGATACAGGTTTGTaGTCCAAGGATTCATTTGCC +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKLDTGL*SKDSFA
Trigger: GGCAAATGAATCCTTGGAGCACAAACCTGTATCCAG...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCATCACTTGGTTCAACTaGAGAGCCTGTTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLITWFN*RACFFS
Trigger: ACTGAAGAAACAGGCTCTGCAGTTGAACCAAGTGAT...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp GCCTTGTGTGTCAACATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAAATCACTTGGTTCAACTaGAGAGCCTGTTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: ALCVNILVNLYLNERRSKITWFN*RACFFS
Trigger: ACTGAAGAAACAGGCTCTGCAGTTGAACCAAGTGAT...TTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAATGTTGACACACAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR GCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCGTAAAGTCAATATTCTaGAATGGGCCTCCAACACTG +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLVKSIF*NGPPTL
Trigger: CAGTGTTGGAGGCCCATTGCAGAATATTGACTTTAC...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp AAGATTCAAGTTCTTTACGGAGTACTAGAGGACTCAAGTAGGGCACAGAAACAGGAATATACACAAGTTTaGTATCCTGGGACAGAGATG +
Preference number: 4 (lower is better)
Translates to: KIQVLYGVLEDSSRAQKQEYTQV*YPGTEM
Trigger: CATCTCTGTCCCAGGATAGCAAACTTGTGTATATTC...CTGTTTCTGTGCCCTACTTGAGTCCTCTAGTACTCCGTAAAGAACTTGAATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCGCTGGCCTAAGAGAATaGAGCAGAATTTTACTCTCA +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLAGLRE*SRILLS
Trigger: TGAGAGTAAAATTCTGCTGCATTCTCTTAGGCCAGC...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp ATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAAACACTTCCTGCACCAGGCTTTTTGGGAAGTTaGTTCCAGTTCATGTTCTTC +
Preference number: 4 (lower is better)
Translates to: ILVNLYLNERRSKTLPAPGFLGS*FQFMFF
Trigger: GAAGAACATGAACTGGAAGCAACTTCCCAAAAAGCC...TGGTGCAGGAAGTGTTTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTTTGCCAGGAGAAATCTaGTTCAATTGGAGTCATGTC +
Preference number: 4 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGLPGEI*FNWSHV
Trigger: GACATGACTCCAATTGAAGCAGATTTCTCCTGGCAA...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR GCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATGAGACCTGTGACCTTTaGACAGTCTTTTTAAGCGGC +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHETCDL*TVFLSG
Trigger: GCCGCTTAAAAAGACTGTGCAAAGGTCACAGGTCTC...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATGAACTTTCACAATACTaGTGCCCCATGCAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHELSQY*CPMQEV
Trigger: AACCTCCTGCATGGGGCAGCAGTATTGTGAAAGTTC...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp GTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGTAGCTTCGCCAAAGACTaGATCTTCAACTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: VEHQFSATFQESLKTDYCSFAKD*IFNWIL
Trigger: CAAGATCCAGTTGAAGATGCAGTCTTTGGCGAAGCT...ACAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR GCA 90 bp GTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGTCTTAGGACATGTCAATaGTGCTGTGAGAATCTTGGC +
Preference number: 4 (lower is better)
Translates to: VEHQFSATFQESLKTDYCLRTCQ*CCENLG
Trigger: GCCAAGATTCTCACAGCAGCATTGACATGTCCTAAG...ACAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR GCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAACTTAGGACATGTCAATaGTGCTGTGAGAATCTTGGC +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKLRTCQ*CCENLG
Trigger: GCCAAGATTCTCACAGCAGCATTGACATGTCCTAAG...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp GTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGTGCTCAGGATTCCAAGTaGTTTCAGACATACAAGTCC +
Preference number: 4 (lower is better)
Translates to: VEHQFSATFQESLKTDYCAQDSK*FQTYKS
Trigger: GGACTTGTATGTCTGAAAGCACTTGGAATCCTGAGC...ACAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR GCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATACCGGAGATGATCTGTaGTCAGGATTCCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHTGDDL*SGFQVL
Trigger: AAGCACTTGGAATCCTGAGCACAGATCATCTCCGGT...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGTACTGTATTTTCTGCTaGCTGCTCCTCTGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRYCIFC*LLLCQR
Trigger: GCGCTGACAGAGGAGCAGGCAGCAGAAAATACAGTA...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATCTACCCACATCTTACTaGCTACTGTCGCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHLPTSY*LLSLLV
Trigger: AACAAGCAGCGACAGTAGCCAGTAAGATGTGGGTAG...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAAGACTTGTGTTGCTCTaGGTAAGTTCACTGGGGACC +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRRLVLL*VSSLGT
Trigger: GGTCCCCAGTGAACTTACCCAGAGCAACACAAGTCT...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGAGACTTGTGTTGCTCTaGGTAAGTTCACTGGGGACC +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRRLVLL*VSSLGT
Trigger: GGTCCCCAGTGAACTTACCCAGAGCAACACAAGTCT...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCCATGCCTCTTGGAAATaGAACTTCACCTGTTGGATA +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLHASWK*NFTCWI
Trigger: TATCCAACAGGTGAAGTTCCATTTCCAAGAGGCATG...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAACCCTTTCATGCCTCTTaGAAATGGAACTTCACCTGT +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKPFHAS*KWNFTC
Trigger: ACAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGG...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGGTCACCAGAGGTACTTaGTTTCAGGAAAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: LVFKGQVYISQKENISPLVTRGT*FQEKAC
Trigger: GCAAGCTTTTTCCTGAAACCAAGTACCTCTGGTGAC...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAGTCACCAGAGGTACTTaGTTTCAGGAAAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGVTRGT*FQEKAC
Trigger: GCAAGCTTTTTCCTGAAACCAAGTACCTCTGGTGAC...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp ATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAAACACTTCCTGCACCAAAACAGGGGGAGGATTaGGTCTTTTTCCTAAAGGAT +
Preference number: 4 (lower is better)
Translates to: ILVNLYLNERRSKTLPAPKQGED*VFFLKD
Trigger: ATCCTTTAGGAAAAAGACCCAATCCTCCCCCTGTTT...TGGTGCAGGAAGTGTTTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CCA 90 bp AAGATTCAAGTTCTTTACGGAGTACTAGAGGACTCAAGTAGGGCACAGAAACAGATACAGAGGTTCTCTTaGTTCCTGATGAAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: KIQVLYGVLEDSSRAQKQIQRFS*FLMKVD
Trigger: ATCAACCTTCATCAGGAACCAAGAGAACCTCTGTAT...CTGTTTCTGTGCCCTACTTGAGTCCTCTAGTACTCCGTAAAGAACTTGAATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAGACACTGGCACTTGGTaGAGCATCAATTTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKDTGTW*SINFLQ
Trigger: TTGCAGAAAATTGATGCTCCACCAAGTGCCAGTGTC...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATCTCGACACTGGCACTTaGTGGAGCATCAATTTTCTG +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHLDTGT*WSINFL
Trigger: CAGAAAATTGATGCTCCACCAAGTGCCAGTGTCGAG...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGACTGGAAGTGGATATTTaGTTTCAGGATCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGLEVDI*FQDPST
Trigger: AGTGCTGGGATCCTGAAACCAAATATCCACTTCCAG...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTACAAAGGGGAATATATaGGCATTGCCACTGAAATGG +
Preference number: 4 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGTKGNI*ALPLKW
Trigger: CCATTTCAGTGGCAATGCCCATATATTCCCCTTTGT...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR CCA 90 bp GGTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGACAAAGGGGAATATATaGGCATTGCCACTGAAATGG +
Preference number: 4 (lower is better)
Translates to: GGASIFCNLSRISEDRLLTKGNI*ALPLKW
Trigger: CCATTTCAGTGGCAATGCCCATATATTCCCCTTTGT...CAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CCA 90 bp ACATCAAATATACCAGACGGAACTTTCACAATACTGCTGCCCCATGCAGGAGGTAACAACATCTTGTGGTaGGTCATGAAGATCAAAATA +
Preference number: 4 (lower is better)
Translates to: TSNIPDGTFTILLPHAGGNNILW*VMKIKI
Trigger: TATTTTGATCTTCATGACCCACCACAAGATGTTGTT...ACCTCCTGCATGGGGCAGCAGTATTGTGAAAGTTCCGTCTGGTATATTTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CCA 90 bp GATTTTTCAAAGTCTTGCCCTTTCATGCCTCTTGGAAATGGAACTTCACCTGTTATGAATCAGCAGCTGTaGCTTTATTTGAAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: DFSKSCPFMPLGNGTSPVMNQQL*LYLKEP
Trigger: AGGCTCCTTCAAATAAAGCCACAGCTGCTGATTCAT...AACAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGGCAAGACTTTGAAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAATCAGGAGGTGGCTCTaGCGGCATTATAAATACAGT +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGIRRWL*RHYKYS
Trigger: ACTGTATTTATAATGCCGCCAGAGCCACCTCCTGAT...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGTACCCTTTGATACCTTaGTTCAACTGCAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LVFKGQVYISQKENISPLYPLIP*FNCRAC
Trigger: ACAGGCTCTGCAGTTGAACCAAGGTATCAAAGGGTA...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTGGAGAGCTGATGGAGTaGCTTCTACACAGGTGTAAC +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIGELME*LLHRCN
Trigger: GTTACACCTGTGTAGAAGCCACTCCATCAGCTCTCC...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR TCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGACTCCTCTCTAGAGCATaGATAAATGCAGTAGTCATG +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGLLSRA*INAVVM
Trigger: CATGACTACTGCATTTATTCATGCTCTAGAGAGGAG...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAACTCCTCTCTAGAGCATaGATAAATGCAGTAGTCATG +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKLLSRA*INAVVM
Trigger: CATGACTACTGCATTTATTCATGCTCTAGAGAGGAG...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTGTTGAACGTTCTTTATaGGTTCGAGAGGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIVERSL*VREGVC
Trigger: GCAAACCCCCTCTCGAACTCATAAAGAACGTTCAAC...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCAGAAGAACCATGATCTaGTTTTTCAAAGTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLRRTMI*FFKVLP
Trigger: GGGCAAGACTTTGAAAAATCAGATCATGGTTCTTCT...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAAGCTGTATTCAAATTTaGGTCATCTGCTGTCCATCC +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKSCIQI*VICCPS
Trigger: GGATGGACAGCAGATGACTCAAATTTGAATACAGCT...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGTGGAAGACTAACTGTTaGGATGCCATGAAACGGTCG +
Preference number: 4 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMWKTNC*DAMKRS
Trigger: CGACCGTTTCATGGCATCTCAACAGTTAGTCTTCCA...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR TCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGTGGAAGACTAACTGTTaGGATGCCATGAAACGGTCG +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRWKTNC*DAMKRS
Trigger: CGACCGTTTCATGGCATCTCAACAGTTAGTCTTCCA...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATGGAAGACTAACTGTTaGGATGCCATGAAACGGTCG +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRWKTNC*DAMKRS
Trigger: CGACCGTTTCATGGCATCTCAACAGTTAGTCTTCCA...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGGAAGGTCCAAACGTCTaGAATACCAAACGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQREGPNV*NTKRGS
Trigger: GGAACCTCGTTTGGTATTTCAGACGTTTGGACCTTC...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TTCCCAGTAGGGTGTCTACTAAAACAAAGTTTCAACTCCTGCGGTCTGTCAAAAATTAAAATTCCTCCATaGGACATACAGAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: FPVGCLLKQSFNSCGLSKIKIPP*DIQRFS
Trigger: AGAGAACCTCTGTATGTCTCATGGAGGAATTTTAAT...TTTTGACAGACCGCAGGAGTTGAAACTTTGTTTTAGTAGACACCCTACTGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR TCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATGCTGAATACTCTGCCTaGTGGTTTCTACTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHAEYSA*WFLLKC
Trigger: GCACTTTAGTAGAAACCATCAGGCAGAGTATTCAGC...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp GGTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGCCTTTCAAGAATCTCTaGAGACAGACTATTGTATGC +
Preference number: 4 (lower is better)
Translates to: GGASIFCNLSRISEDRLLPFKNL*RQTIVC
Trigger: GCATACAATAGTCTGTCTTCAGAGATTCTTGAAAGG...CAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR TCA 90 bp ATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAAACACTTCCTGCACCAGAATCTCTATTTAAATaGGAGGCGCTCCAAAACACT +
Preference number: 4 (lower is better)
Translates to: ILVNLYLNERRSKTLPAPESLFK*EALQNT
Trigger: AGTGTTTTGGAGCGCCTCTCATTTAAATAGAGATTC...TGGTGCAGGAAGTGTTTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR TCA 90 bp GGTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGTTGAATGTTTCCAGATaGAATCTAATCCCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: GGASIFCNLSRISEDRLLLNVSR*NLIPKP
Trigger: AGGCTTGGGGATTAGATTTCATCTGGAAACATTCAA...CAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR TCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTCTGTCGGTCAAACAATaGATCAGCAGCTGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTILSVKQ*ISSCGF
Trigger: AAAGCCACAGCTGCTGATTCATTGTTTGACCGACAG...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp GGTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGTACTTTTCCTGCTGTTaGCATCAAATATACCAGACG +
Preference number: 4 (lower is better)
Translates to: GGASIFCNLSRISEDRLLYFSCC*HQIYQT
Trigger: CGTCTGGTATATTTGATGTCAACAGCAGGAAAAGTA...CAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR TCA 90 bp AAGATTCAAGTTCTTTACGGAGTACTAGAGGACTCAAGTAGGGCACAGAAACAGGATAGCCATTTCACTTaGATTCGAATCCAAACTACT +
Preference number: 4 (lower is better)
Translates to: KIQVLYGVLEDSSRAQKQDSHFT*IRIQTT
Trigger: AGTAGTTTGGATTCGAATTCAAGTGAAATGGCTATC...CTGTTTCTGTGCCCTACTTGAGTCCTCTAGTACTCCGTAAAGAACTTGAATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR TCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTATGTCAATGCTGCTGTaGGAATCTTGGCATCTGCTC +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIMSMLL*ESWHLL
Trigger: GAGCAGATGCCAAGATTCTCACAGCAGCATTGACAT...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCTGGGTTCTTGCAATATaGAGTAGAGAAGTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLWVLAI*SREVLG
Trigger: TCCTAAGACTTCTCTACTTCATATTGCAAGAACCCA...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATTCAACATCTTCCCTCTaGACCACCTTAGCAATACCA +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHSTSSL*TTLAIP
Trigger: TGGTATTGCTAAGGTGGTTCAGAGGGAAGATGTTGA...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTGGTCTCTGTACCCTTTaGTACCTTGGTTCAACTGCA +
Preference number: 4 (lower is better)
Translates to: LNARTYAYMSQVVFRDRIGLCTL*YLGSTA
Trigger: TGCAGTTGAACCAAGGTATCAAAGGGTACAGAGACC...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR TCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAACTTTGCAGAAGGTATaGGGAGGAGTTTCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKTLQKV*GGVSPL
Trigger: TAAAGGAGAAACTCCTCCTCATACCTTCTGCAAAGT...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR TCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGACCACCTGTGCTAGAGTaGTTATCAATGGACTCAAGC +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRPPVLE*LSMDSS
Trigger: GCTTGAGTCCATTGATAATCACTCTAGCACAGGTGG...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR TCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATATCCTTGGTCAGACTaGCCACCTGATATTGAGGAG +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRYPWSD*PPDIEE
Trigger: CTCCTCAATATCAGGTGGTCAGTCTGACCAAGGATA...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602925.5
CDS-3UTR GCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAACTGGCTACTGTCGCTaGTTGTTTCATACCAGATTT +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKTGYCR*LFHTRF
Trigger: AAATCTGGTATGAAACAAGCAGCGACAGTAGCCAGT...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGACTGGCTACTGTCGCTaGTTGTTTCATACCAGATTT +
Preference number: 4 (lower is better)
Translates to: LVFKGQVYISQKENISPLTGYCR*LFHTRF
Trigger: AAATCTGGTATGAAACAAGCAGCGACAGTAGCCAGT...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR GCA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGCACTACTGCTGCTACTaGCAAGACTTGTGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMHYCCY*QDLCCS
Trigger: AGAGCAACACAAGTCTTGGCAGTAGCAGCAGTAGTG...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR GCA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTCACTACTGCTGCTACTaGCAAGACTTGTGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: LNARTYAYMSQVVFRDRIHYCCY*QDLCCS
Trigger: AGAGCAACACAAGTCTTGGCAGTAGCAGCAGTAGTG...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR GCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGACACTACTGCTGCTACTaGCAAGACTTGTGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRHYCCY*QDLCCS
Trigger: AGAGCAACACAAGTCTTGGCAGTAGCAGCAGTAGTG...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTCATCTCCACTACTGCTaGTACTGCCAAGACTTGTGT +
Preference number: 4 (lower is better)
Translates to: LNARTYAYMSQVVFRDRIHLHYC*YCQDLC
Trigger: ACACAAGTCTTGGCAGTAGCAGCAGTAGTGGAGATG...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR GCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGACATCTCCACTACTGCTaGTACTGCCAAGACTTGTGT +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRHLHYC*YCQDLC
Trigger: ACACAAGTCTTGGCAGTAGCAGCAGTAGTGGAGATG...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTCTACATCTCCACTACTaGTGCTACTGCCAAGACTTG +
Preference number: 4 (lower is better)
Translates to: LNARTYAYMSQVVFRDRILHLHY*CYCQDL
Trigger: CAAGTCTTGGCAGTAGCAGCAGTAGTGGAGATGTAG...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR GCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTCTACATCTCCACTACTaGTGCTACTGCCAAGACTTG +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTILHLHY*CYCQDL
Trigger: CAAGTCTTGGCAGTAGCAGCAGTAGTGGAGATGTAG...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTGATTTTTCAAAGTCTTaGCCTTTCATGCCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGDFSKS*PFMPLG
Trigger: TCCAAGAGGCATGAAAGGGCAAGACTTTGAAAAATC...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR GCA 90 bp GGTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGGATTTTTCAAAGTCTTaGCCTTTCATGCCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: GGASIFCNLSRISEDRLLDFSKS*PFMPLG
Trigger: TCCAAGAGGCATGAAAGGGCAAGACTTTGAAAAATC...CAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR GCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCGAAGAGGCAAGAAGTTaGTTTTACAGAATGGACAAG +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLEEARS*FYRMDK
Trigger: CTTGTCCATTCTGTAAAAGCAACTTCTTGCCTCTTC...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGACTCCAAGGATTCATTTaGCAATGGAATGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGLQGFI*QWNAST
Trigger: AGTGGAAGCATTCCATTGGCAAATGAATCCTTGGAG...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAGTAAAGTCAATATTCTaGAATGGGCCTCCAACACTG +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGVKSIF*NGPPTL
Trigger: CAGTGTTGGAGGCCCATTGCAGAATATTGACTTTAC...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp GCACACCTGTTTAGTTCTCTTAGCCATGAGAGGTGGACTCTTTGTAATGCTATTGGAGCATCAATTTTCTaGAACCTTTCAAGAATCTCT +
Preference number: 4 (lower is better)
Translates to: AHLFSSLSHERWTLCNAIGASIF*NLSRIS
Trigger: AGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCC...AATAGCATTACAAAGAGTCCACCTCTCATGGCTAAGAGAACTAAACAGGTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATGTCAACAAGCCCAGGTaGATAAGCTGTTTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHVNKPR*ISCFSD
Trigger: ATCAGAGAAACAGCTTATGCACCTGGGCTTGTTGAC...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGAAAGAGCAGCAGTGTTaGACAATTCTCAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRKEQQC*TILRTQ
Trigger: CTGGGTCCTGAGAATTGTGCAACACTGCTGCTCTTT...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTAAAGAGCAGCAGTGTTaGACAATTCTCAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIKEQQC*TILRTQ
Trigger: CTGGGTCCTGAGAATTGTGCAACACTGCTGCTCTTT...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAGGCTTTTTGGGAAGTTaGTTCCAGTTCATGTTCTTC +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKGFLGS*FQFMFF
Trigger: GAAGAACATGAACTGGAAGCAACTTCCCAAAAAGCC...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTGTCTTTTTAAGCGGCTaGCTAAACTGTGCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIVFLSG*LNCAKP
Trigger: TGGCTTGGCACAGTTTAGGCAGCCGCTTAAAAAGAC...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAGAGACCTGTGACCTTTaGACAGTCTTTTTAAGCGGC +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRETCDL*TVFLSG
Trigger: GCCGCTTAAAAAGACTGTGCAAAGGTCACAGGTCTC...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAGTTATCAATTCTCTTaGTGCCTGTTCTTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGSYQFS*CLFFRH
Trigger: GTGCCTGAAGAACAGGCAGCAAGAGAATTGATAACT...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAGAACTTTCACAATACTaGTGCCCCATGCAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRELSQY*CPMQEV
Trigger: AACCTCCTGCATGGGGCAGCAGTATTGTGAAAGTTC...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp GCACACCTGTTTAGTTCTCTTAGCCATGAGAGGTGGACTCTTTGTAATGCTATTCTTAAGCAACATTCCTaGTCGACTTTCAGAACTAAA +
Preference number: 4 (lower is better)
Translates to: AHLFSSLSHERWTLCNAILKQHS*STFRTK
Trigger: TTTAGTTCTGAAAGTCGAGCAGGAATGTTGCTTAAG...AATAGCATTACAAAGAGTCCACCTCTCATGGCTAAGAGAACTAAACAGGTGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATGAGAATCTTGGCATCTaGTCCCATCATGATAGCCAT +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHENLGI*SHHDSH
Trigger: ATGGCTATCATGATGGGAGCAGATGCCAAGATTCTC...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATAGGACATGTCAATGCTaGTGTGAGAATCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHRTCQC*CENLGI
Trigger: GATGCCAAGATTCTCACAGCAGCATTGACATGTCCT...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAACCGGAGATGATCTGTaGTCAGGATTCCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRTGDDL*SGFQVL
Trigger: AAGCACTTGGAATCCTGAGCACAGATCATCTCCGGT...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGATACCTTGGTTCAACTaGAGAGCCTGTTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LVFKGQVYISQKENISPLIPWFN*RACFFS
Trigger: ACTGAAGAAACAGGCTCTGCAGTTGAACCAAGGTAT...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CCA 90 bp GCCTTGTGTGTCAACATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAATCAGGACATCTATCTTaGGCCCTGAGAGTATATTAT +
Preference number: 4 (lower is better)
Translates to: ALCVNILVNLYLNERRSKSGHLS*ALRVYY
Trigger: ATAATATACTCTCAGGGCCCAAGATAGATGTCCTGA...TTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAATGTTGACACACAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTCTACCCACATCTTACTaGCTACTGTCGCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTILPTSY*LLSLLV
Trigger: AACAAGCAGCGACAGTAGCCAGTAAGATGTGGGTAG...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTCTACCCACATCTTACTaGCTACTGTCGCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: LNARTYAYMSQVVFRDRILPTSY*LLSLLV
Trigger: AACAAGCAGCGACAGTAGCCAGTAAGATGTGGGTAG...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGACTACCCACATCTTACTaGCTACTGTCGCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRLPTSY*LLSLLV
Trigger: AACAAGCAGCGACAGTAGCCAGTAAGATGTGGGTAG...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGCTACCCACATCTTACTaGCTACTGTCGCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRLPTSY*LLSLLV
Trigger: AACAAGCAGCGACAGTAGCCAGTAAGATGTGGGTAG...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTTGGAACTTCACCTGTTaGATAATGCAGTTTTCCTAC +
Preference number: 4 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGWNFTC*IMQFSY
Trigger: GTAGGAAAACTGCATTATCCAACAGGTGAAGTTCCA...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR CCA 90 bp GCCTTGTGTGTCAACATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAATGGAACTTCACCTGTTaGATAATGCAGTTTTCCTAC +
Preference number: 4 (lower is better)
Translates to: ALCVNILVNLYLNERRSKWNFTC*IMQFSY
Trigger: GTAGGAAAACTGCATTATCCAACAGGTGAAGTTCCA...TTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAATGTTGACACACAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCTGGAACTTCACCTGTTaGATAATGCAGTTTTCCTAC +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLWNFTC*IMQFSY
Trigger: GTAGGAAAACTGCATTATCCAACAGGTGAAGTTCCA...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGCATGCCTCTTGGAAATaGAACTTCACCTGTTGGATA +
Preference number: 4 (lower is better)
Translates to: LVFKGQVYISQKENISPLHASWK*NFTCWI
Trigger: TATCCAACAGGTGAAGTTCCATTTCCAAGAGGCATG...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAACATGCCTCTTGGAAATaGAACTTCACCTGTTGGATA +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKHASWK*NFTCWI
Trigger: TATCCAACAGGTGAAGTTCCATTTCCAAGAGGCATG...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGACATGCCTCTTGGAAATaGAACTTCACCTGTTGGATA +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGHASWK*NFTCWI
Trigger: TATCCAACAGGTGAAGTTCCATTTCCAAGAGGCATG...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATCCCTTTCATGCCTCTTaGAAATGGAACTTCACCTGT +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHPFHAS*KWNFTC
Trigger: ACAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGG...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTGAAATTTTCATAGTTTaGACATCTCCACTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGEIFIV*TSPLAL
Trigger: GAGAGCCAGTGGAGATGTCCAAACTATGAAAATTTC...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR CCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAACAGGGGGAGGATTaGGTCTTTTTCCTAAAGGAT +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGKQGED*VFFLKD
Trigger: ATCCTTTAGGAAAAAGACCCAATCCTCCCCCTGTTT...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATTGTGAGGATAAGTCCTaGCAAGTTACTAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHCEDKS*QVTRKV
Trigger: GACCTTCCTAGTAACTTGCCAGGACTTATCCTCACA...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATACAAGTTTGCTATCCTaGGACAGAGATGACAGAGGA +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHTSLLS*DRDDRG
Trigger: TCCTCTGTCATCTCTGTCCCAGGATAGCAAACTTGT...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCATACAGAGGTTCTCTTaGTTCCTGATGAAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLIQRFS*FLMKVD
Trigger: ATCAACCTTCATCAGGAACCAAGAGAACCTCTGTAT...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp GGTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGATACAGAGGTTCTCTTaGTTCCTGATGAAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: GGASIFCNLSRISEDRLLIQRFS*FLMKVD
Trigger: ATCAACCTTCATCAGGAACCAAGAGAACCTCTGTAT...CAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGACTCGACACTGGCACTTaGTGGAGCATCAATTTTCTG +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRLDTGT*WSINFL
Trigger: CAGAAAATTGATGCTCCACCAAGTGCCAGTGTCGAG...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGCTCGACACTGGCACTTaGTGGAGCATCAATTTTCTG +
Preference number: 4 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMLDTGT*WSINFL
Trigger: CAGAAAATTGATGCTCCACCAAGTGCCAGTGTCGAG...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR CCA 90 bp GATTTTTCAAAGTCTTGCCCTTTCATGCCTCTTGGAAATGGAACTTCACCTGTTCTCCATATACCTTTTTaGCTGAAGAACCTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: DFSKSCPFMPLGNGTSPVLHIPF*LKNLSR
Trigger: TCTTGACAGGTTCTTCAGCCAAAAAGGTATATGGAG...AACAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGGCAAGACTTTGAAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGTCATGGACTGACAGCTaGACAAGGATTCTCGGTCTT +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRSWTDS*TRILGL
Trigger: AAGACCGAGAATCCTTGTCCAGCTGTCAGTCCATGA...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTAATATTAATGCATCATaGACTGACAGCTGGACAAGG +
Preference number: 4 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGNINAS*TDSWTR
Trigger: CCTTGTCCAGCTGTCAGTCCATGATGCATTAATATT...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR CCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCAGGAGCCTCTGTGATTaGTCTGAGATATGTTCTATA +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLRSLCD*SEICSI
Trigger: TATAGAACATATCTCAGACCAATCACAGAGGCTCCT...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATCCATCATCAGGAGGTaGCTCTGGCGGCATTATAAA +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRSIIRR*LWRHYK
Trigger: TTTATAATGCCGCCAGAGCCACCTCCTGATGATGGA...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAACACTTGGCCCACTGTaGTGGATTTGTATAACATCT +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGTLGPL*WICITS
Trigger: AGATGTTATACAAATCCACCACAGTGGGCCAAGTGT...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCGACTGCATCTTCAACTaGATCTTGAGTAGAAAACAG +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLDCIFN*ILSRKQ
Trigger: CTGTTTTCTACTCAAGATCCAGTTGAAGATGCAGTC...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTGGCTCAAGGAGTTCTTaGCTTTCCTCAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIGSRSS*LSSSIS
Trigger: AGAGATGCTTGAGGAAAGCCAAGAACTCCTTGAGCC...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAGGCTCAAGGAGTTCTTaGCTTTCCTCAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRGSRSS*LSSSIS
Trigger: AGAGATGCTTGAGGAAAGCCAAGAACTCCTTGAGCC...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
3UTR CAA 72 bp GATCTGATTTTTCAAAGTCTTGCCCTTTCATGCCTCTaGGAAATGGAACTTCACCTGTTGGATAATGCAGTT +
Preference number: 4 (lower is better)
Translates to: DLIFQSLALSCL*EMELHLLDNAV
Trigger: AACTGCATTATCCAACAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGGCAAGACTTTGAAAAATCAGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR TCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATCTCCTCTCTAGAGCATaGATAAATGCAGTAGTCATG +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHLLSRA*INAVVM
Trigger: CATGACTACTGCATTTATTCATGCTCTAGAGAGGAG...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGTGTGCTGGTGAACCATaGTCTAAAGGTAGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRCAGEP*SKGRLD
Trigger: ATCAAGCCTACCTTTAGATCATGGTTCACCAGCACA...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATGTGCTGGTGAACCATaGTCTAAAGGTAGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRCAGEP*SKGRLD
Trigger: ATCAAGCCTACCTTTAGATCATGGTTCACCAGCACA...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGAGAAGAACCATGATCTaGTTTTTCAAAGTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LVFKGQVYISQKENISPLRRTMI*FFKVLP
Trigger: GGGCAAGACTTTGAAAAATCAGATCATGGTTCTTCT...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR TCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCCTGTTTCTTCAGTTATaGTCTGGTTATGTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLLFLQL*SGYVLG
Trigger: TCCCAAAACATAACCAGATCATAACTGAAGAAACAG...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAGTTCCTGATGAAGGTTaGTATTATCCCATAACAGCT +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKVPDEG*YYPITA
Trigger: AGCTGTTATGGGATAATATCAACCTTCATCAGGAAC...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGGCTGAATACTCTGCCTaGTGGTTTCTACTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRAEYSA*WFLLKC
Trigger: GCACTTTAGTAGAAACCATCAGGCAGAGTATTCAGC...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAGCTGAATACTCTGCCTaGTGGTTTCTACTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRAEYSA*WFLLKC
Trigger: GCACTTTAGTAGAAACCATCAGGCAGAGTATTCAGC...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGACCTTTCAAGAATCTCTaGAGACAGACTATTGTATGC +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGPFKNL*RQTIVC
Trigger: GCATACAATAGTCTGTCTTCAGAGATTCTTGAAAGG...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTCTCGGTCTTTGTGGTaGAGGAAAAGGGATGTTTTG +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTISRSLW*RKRDVL
Trigger: CAAAACATCCCTTTTCCTTCACCACAAAGACCGAGA...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTACATCATATGCCTGCTaGAGTGCTCTGACTTTAGGA +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTITSYAC*SALTLG
Trigger: TCCTAAAGTCAGAGCACTTCAGCAGGCATATGATGT...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR TCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAATGTTCTTCAGGCACATaGATTTCTGCATCATCCTTT +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKCSSGT*ISASSF
Trigger: AAAGGATGATGCAGAAATTCATGTGCCTGAAGAACA...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGATGTTCTTCAGGCACATaGATTTCTGCATCATCCTTT +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGCSSGT*ISASSF
Trigger: AAAGGATGATGCAGAAATTCATGTGCCTGAAGAACA...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTAGAAAACAGCACATTTaGTATACTACCAGTGCTACT +
Preference number: 4 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGRKQHI*YTTSAT
Trigger: AGTAGCACTGGTAGTATATCAAATGTGCTGTTTTCT...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR TCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCGATAGCCATTTCACTTaGATTCGAATCCAAACTACT +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLDSHFT*IRIQTT
Trigger: AGTAGTTTGGATTCGAATTCAAGTGAAATGGCTATC...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCTTCAAGTCTCTGGACTaGTTACTGTTACTATCACTT +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLFKSLD*LLLLSL
Trigger: AAGTGATAGTAACAGTAATCAGTCCAGAGACTTGAA...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGCCACCTGTGACATTTTaGAGAGCTGATATTGAGGAG +
Preference number: 4 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMPPVTF*RADIEE
Trigger: CTCCTCAATATCAGCTCTTCAAAATGTCACAGGTGG...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR TCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAAAGCGCGTCAGTAAGTaGAAACTTGAGTTCAAGTTA +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKKRVSK*KLEFKL
Trigger: TAACTTGAACTCAAGTTTTCACTTACTGACGCGCTT...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR GCA 90 bp GGTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGATCAGCCAGATTACGTaGAATAACTGGAGAAAACAA +
Preference number: 4 (lower is better)
Translates to: GGASIFCNLSRISEDRLLISQIT*NNWRKQ
Trigger: TTGTTTTCTCCAGTTATTGCACGTAATCTGGCTGAT...CAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR GCA 90 bp GATTTTTCAAAGTCTTGCCCTTTCATGCCTCTTGGAAATGGAACTTCACCTGTTATCAGCCAGATTACGTaGAATAACTGGAGAAAACAA +
Preference number: 4 (lower is better)
Translates to: DFSKSCPFMPLGNGTSPVISQIT*NNWRKQ
Trigger: TTGTTTTCTCCAGTTATTGCACGTAATCTGGCTGAT...AACAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGGCAAGACTTTGAAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR GCA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGGATTTTTCAAAGTCTTaGCCTTTCATGCCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: LVFKGQVYISQKENISPLDFSKS*PFMPLG
Trigger: TCCAAGAGGCATGAAAGGGCAAGACTTTGAAAAATC...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR GCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAGATTTTTCAAAGTCTTaGCCTTTCATGCCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKDFSKS*PFMPLG
Trigger: TCCAAGAGGCATGAAAGGGCAAGACTTTGAAAAATC...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAGAAGAGGCAAGAAGTTaGTTTTACAGAATGGACAAG +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKEEARS*FYRMDK
Trigger: CTTGTCCATTCTGTAAAAGCAACTTCTTGCCTCTTC...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATCTCCAAGGATTCATTTaGCAATGGAATGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHLQGFI*QWNAST
Trigger: AGTGGAAGCATTCCATTGGCAAATGAATCCTTGGAG...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTCTGGATACAGGTTTGTaGTCCAAGGATTCATTTGCC +
Preference number: 4 (lower is better)
Translates to: LNARTYAYMSQVVFRDRILDTGL*SKDSFA
Trigger: GGCAAATGAATCCTTGGAGCACAAACCTGTATCCAG...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR GCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTCTGGATACAGGTTTGTaGTCCAAGGATTCATTTGCC +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTILDTGL*SKDSFA
Trigger: GGCAAATGAATCCTTGGAGCACAAACCTGTATCCAG...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATGTAAAGTCAATATTCTaGAATGGGCCTCCAACACTG +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHVKSIF*NGPPTL
Trigger: CAGTGTTGGAGGCCCATTGCAGAATATTGACTTTAC...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAGAATATACACAAGTTTaGTATCCTGGGACAGAGATG +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGEYTQV*YPGTEM
Trigger: CATCTCTGTCCCAGGATAGCAAACTTGTGTATATTC...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCGGAGCATCAATTTTCTaGAACCTTTCAAGAATCTCT +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLGASIF*NLSRIS
Trigger: AGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCC...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAGTCAACAAGCCCAGGTaGATAAGCTGTTTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRVNKPR*ISCFSD
Trigger: ATCAGAGAAACAGCTTATGCACCTGGGCTTGTTGAC...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGAGCTTCGCCAAAGACTaGATCTTCAACTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMSFAKD*IFNWIL
Trigger: CAAGATCCAGTTGAAGATGCAGTCTTTGGCGAAGCT...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR GCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGAGCTTCGCCAAAGACTaGATCTTCAACTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRSFAKD*IFNWIL
Trigger: CAAGATCCAGTTGAAGATGCAGTCTTTGGCGAAGCT...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTGAGAATCTTGGCATCTaGTCCCATCATGATAGCCAT +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIENLGI*SHHDSH
Trigger: ATGGCTATCATGATGGGAGCAGATGCCAAGATTCTC...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTAGGACATGTCAATGCTaGTGTGAGAATCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIRTCQC*CENLGI
Trigger: GATGCCAAGATTCTCACAGCAGCATTGACATGTCCT...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTCTTAGGACATGTCAATaGTGCTGTGAGAATCTTGGC +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTILRTCQ*CCENLG
Trigger: GCCAAGATTCTCACAGCAGCATTGACATGTCCTAAG...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAGCTCAGGATTCCAAGTaGTTTCAGACATACAAGTCC +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRAQDSK*FQTYKS
Trigger: GGACTTGTATGTCTGAAAGCACTTGGAATCCTGAGC...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGGCTCAGGATTCCAAGTaGTTTCAGACATACAAGTCC +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRAQDSK*FQTYKS
Trigger: GGACTTGTATGTCTGAAAGCACTTGGAATCCTGAGC...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGATCAGGACATCTATCTTaGGCCCTGAGAGTATATTAT +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGSGHLS*ALRVYY
Trigger: ATAATATACTCTCAGGGCCCAAGATAGATGTCCTGA...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGTGGAACTTCACCTGTTaGATAATGCAGTTTTCCTAC +
Preference number: 4 (lower is better)
Translates to: LVFKGQVYISQKENISPLWNFTC*IMQFSY
Trigger: GTAGGAAAACTGCATTATCCAACAGGTGAAGTTCCA...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CCA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTCCCTTTCATGCCTCTTaGAAATGGAACTTCACCTGT +
Preference number: 4 (lower is better)
Translates to: LNARTYAYMSQVVFRDRIPFHAS*KWNFTC
Trigger: ACAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGG...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CCA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGCCCTTTCATGCCTCTTaGAAATGGAACTTCACCTGT +
Preference number: 4 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMPFHAS*KWNFTC
Trigger: ACAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGG...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR CCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTGTCACCAGAGGTACTTaGTTTCAGGAAAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIVTRGT*FQEKAC
Trigger: GCAAGCTTTTTCCTGAAACCAAGTACCTCTGGTGAC...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp ATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAAACACTTCCTGCACCATCTTCAGTTATGATCTaGTTATGTTTTGGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: ILVNLYLNERRSKTLPAPSSVMI*LCFGKS
Trigger: GGACTTCCCAAAACATAACCAGATCATAACTGAAGA...TGGTGCAGGAAGTGTTTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAGAAATTTTCATAGTTTaGACATCTCCACTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKEIFIV*TSPLAL
Trigger: GAGAGCCAGTGGAGATGTCCAAACTATGAAAATTTC...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATGTGAGGATAAGTCCTaGCAAGTTACTAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRCEDKS*QVTRKV
Trigger: GACCTTCCTAGTAACTTGCCAGGACTTATCCTCACA...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGACAAGTTTGCTATCCTaGGACAGAGATGACAGAGGA +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRTSLLS*DRDDRG
Trigger: TCCTCTGTCATCTCTGTCCCAGGATAGCAAACTTGT...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGGACACTGGCACTTGGTaGAGCATCAATTTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMDTGTW*SINFLQ
Trigger: TTGCAGAAAATTGATGCTCCACCAAGTGCCAGTGTC...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR CCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTGACACTGGCACTTGGTaGAGCATCAATTTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIDTGTW*SINFLQ
Trigger: TTGCAGAAAATTGATGCTCCACCAAGTGCCAGTGTC...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCCTACAGTGGTGCGCCTaGCTAATTTTTGTATTTTTA +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLLQWCA*LIFVFL
Trigger: TAAAAATACAAAAATTAGCCAGGCGCACCACTGTAG...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAGGAGCCTCTGTGATTaGTCTGAGATATGTTCTATA +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGRSLCD*SEICSI
Trigger: TATAGAACATATCTCAGACCAATCACAGAGGCTCCT...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGACTTAGCCATGAGAGGTaGACTCTTTGTAATGCTATT +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGLSHER*TLCNAI
Trigger: AATAGCATTACAAAGAGTCCACCTCTCATGGCTAAG...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGAACACAGAAACACGCTaGAACCCCACATTCCACAAT +
Preference number: 4 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMNTETR*NPTFHN
Trigger: ATTGTGGAATGTGGGGTTCCAGCGTGTTTCTGTGTT...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR TCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATAGAAGAACCATGATCTaGTTTTTCAAAGTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHRRTMI*FFKVLP
Trigger: GGGCAAGACTTTGAAAAATCAGATCATGGTTCTTCT...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTAGCTGTATTCAAATTTaGGTCATCTGCTGTCCATCC +
Preference number: 4 (lower is better)
Translates to: LNARTYAYMSQVVFRDRISCIQI*VICCPS
Trigger: GGATGGACAGCAGATGACTCAAATTTGAATACAGCT...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR TCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGAGCTGTATTCAAATTTaGGTCATCTGCTGTCCATCC +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRSCIQI*VICCPS
Trigger: GGATGGACAGCAGATGACTCAAATTTGAATACAGCT...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGACTGTTTCTTCAGTTATaGTCTGGTTATGTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGLFLQL*SGYVLG
Trigger: TCCCAAAACATAACCAGATCATAACTGAAGAAACAG...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAATTAAAATTCCTCCATaGGACATACAGAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGIKIPP*DIQRFS
Trigger: AGAGAACCTCTGTATGTCTCATGGAGGAATTTTAAT...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATAGAACATTATTGTGCTaGATACTCTGCCTGATGGTT +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHRTLLC*ILCLMV
Trigger: AACCATCAGGCAGAGTATTCAGCACAATAATGTTCT...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATGAATCTCTATTTAAATaGGAGGCGCTCCAAAACACT +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHESLFK*EALQNT
Trigger: AGTGTTTTGGAGCGCCTCTCATTTAAATAGAGATTC...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGACTCTTCGCCAATTTATaGGCTGTTTTTATTTCCTGT +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGLFANL*AVFISC
Trigger: ACAGGAAATAAAAACAGCTCATAAATTGGCGAAGAG...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR TCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAAGAAAACAGCACATTTaGTATACTACCAGTGCTACT +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKRKQHI*YTTSAT
Trigger: AGTAGCACTGGTAGTATATCAAATGTGCTGTTTTCT...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAGATAGCCATTTCACTTaGATTCGAATCCAAACTACT +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKDSHFT*IRIQTT
Trigger: AGTAGTTTGGATTCGAATTCAAGTGAAATGGCTATC...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTCTACTATCAGGTAGGTaGCAGCTAACATTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTILLSGR*QLTFSK
Trigger: CTTTGAGAATGTTAGCTGTCACCTACCTGATAGTAG...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGATTCAAGTCTCTGGACTaGTTACTGTTACTATCACTT +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGFKSLD*LLLLSL
Trigger: AAGTGATAGTAACAGTAATCAGTCCAGAGACTTGAA...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp GTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGTTTCAAGTCTCTGGACTaGTTACTGTTACTATCACTT +
Preference number: 4 (lower is better)
Translates to: VEHQFSATFQESLKTDYCFKSLD*LLLLSL
Trigger: AAGTGATAGTAACAGTAATCAGTCCAGAGACTTGAA...ACAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR TCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAACTTTGCAGAAGGTATaGGGAGGAGTTTCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRTLQKV*GGVSPL
Trigger: TAAAGGAGAAACTCCTCCTCATACCTTCTGCAAAGT...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR GCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAATCAGCCAGATTACGTaGAATAACTGGAGAAAACAA +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGISQIT*NNWRKQ
Trigger: TTGTTTTCTCCAGTTATTGCACGTAATCTGGCTGAT...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAATCAGCCAGATTACGTaGAATAACTGGAGAAAACAA +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKISQIT*NNWRKQ
Trigger: TTGTTTTCTCCAGTTATTGCACGTAATCTGGCTGAT...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGACTGGCTACTGTCGCTaGTTGTTTCATACCAGATTT +
Preference number: 4 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMTGYCR*LFHTRF
Trigger: AAATCTGGTATGAAACAAGCAGCGACAGTAGCCAGT...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR GCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAACTGGCTACTGTCGCTaGTTGTTTCATACCAGATTT +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRTGYCR*LFHTRF
Trigger: AAATCTGGTATGAAACAAGCAGCGACAGTAGCCAGT...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTAGTCTTGCCCTTTCATaGCTCTTGGAAATGGAACTT +
Preference number: 4 (lower is better)
Translates to: LNARTYAYMSQVVFRDRISLALS*LLEMEL
Trigger: AAGTTCCATTTCCAAGAGGCATGAAAGGGCAAGACT...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR GCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAAGTCTTGCCCTTTCATaGCTCTTGGAAATGGAACTT +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRSLALS*LLEMEL
Trigger: AAGTTCCATTTCCAAGAGGCATGAAAGGGCAAGACT...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGCATCAAAACCTCCATTaGACAATTCTGATAGATGCT +
Preference number: 4 (lower is better)
Translates to: LVFKGQVYISQKENISPLHQNLH*TILIDA
Trigger: AGCATCTATCAGAATTGTGCAATGGAGGTTTTGATG...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR GCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGACATCAAAACCTCCATTaGACAATTCTGATAGATGCT +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGHQNLH*TILIDA
Trigger: AGCATCTATCAGAATTGTGCAATGGAGGTTTTGATG...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAACATCAAAACCTCCATTaGACAATTCTGATAGATGCT +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKHQNLH*TILIDA
Trigger: AGCATCTATCAGAATTGTGCAATGGAGGTTTTGATG...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGCATTTGCCAATGGAATaGTTCCACTTTGTAAACTGT +
Preference number: 4 (lower is better)
Translates to: LVFKGQVYISQKENISPLHLPME*FHFVNC
Trigger: ACAGTTTACAAAGTGGAAGCATTCCATTGGCAAATG...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR GCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGACATTTGCCAATGGAATaGTTCCACTTTGTAAACTGT +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGHLPME*FHFVNC
Trigger: ACAGTTTACAAAGTGGAAGCATTCCATTGGCAAATG...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTCTCCAAGGATTCATTTaGCAATGGAATGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: LNARTYAYMSQVVFRDRILQGFI*QWNAST
Trigger: AGTGGAAGCATTCCATTGGCAAATGAATCCTTGGAG...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR GCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGATCACTTGGTTCAACTaGAGAGCCTGTTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRITWFN*RACFFS
Trigger: ACTGAAGAAACAGGCTCTGCAGTTGAACCAAGTGAT...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTATCACTTGGTTCAACTaGAGAGCCTGTTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIITWFN*RACFFS
Trigger: ACTGAAGAAACAGGCTCTGCAGTTGAACCAAGTGAT...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATGAATATACACAAGTTTaGTATCCTGGGACAGAGATG +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHEYTQV*YPGTEM
Trigger: CATCTCTGTCCCAGGATAGCAAACTTGTGTATATTC...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAGGAGCATCAATTTTCTaGAACCTTTCAAGAATCTCT +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGGASIF*NLSRIS
Trigger: AGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCC...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGGGCTTTTTGGGAAGTTaGTTCCAGTTCATGTTCTTC +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRGFLGS*FQFMFF
Trigger: GAAGAACATGAACTGGAAGCAACTTCCCAAAAAGCC...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTGCCAGGAGAAATCTaGTTCAATTGGAGTCATGTC +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRLPGEI*FNWSHV
Trigger: GACATGACTCCAATTGAAGCAGATTTCTCCTGGCAA...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGTTGCCAGGAGAAATCTaGTTCAATTGGAGTCATGTC +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRLPGEI*FNWSHV
Trigger: GACATGACTCCAATTGAAGCAGATTTCTCCTGGCAA...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGATATGCCTGCTGAAGTaGTCTGACTTTAGGATGAGA +
Preference number: 4 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMICLLK*SDFRMR
Trigger: TCTCATCCTAAAGTCAGAGCACTTCAGCAGGCATAT...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR GCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTAGTTATCAATTCTCTTaGTGCCTGTTCTTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTISYQFS*CLFFRH
Trigger: GTGCCTGAAGAACAGGCAGCAAGAGAATTGATAACT...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAACTTAAGCAACATTCCTaGTCGACTTTCAGAACTAAA +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKLKQHS*STFRTK
Trigger: TTTAGTTCTGAAAGTCGAGCAGGAATGTTGCTTAAG...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATTCAGGACATCTATCTTaGGCCCTGAGAGTATATTAT +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHSGHLS*ALRVYY
Trigger: ATAATATACTCTCAGGGCCCAAGATAGATGTCCTGA...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTCATGCCTCTTGGAAATaGAACTTCACCTGTTGGATA +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIHASWK*NFTCWI
Trigger: TATCCAACAGGTGAAGTTCCATTTCCAAGAGGCATG...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAATCTTCAGTTATGATCTaGTTATGTTTTGGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKSSVMI*LCFGKS
Trigger: GGACTTCCCAAAACATAACCAGATCATAACTGAAGA...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATGAAATTTTCATAGTTTaGACATCTCCACTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHEIFIV*TSPLAL
Trigger: GAGAGCCAGTGGAGATGTCCAAACTATGAAAATTTC...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAAAACAGGGGGAGGATTaGGTCTTTTTCCTAAAGGAT +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRKQGED*VFFLKD
Trigger: ATCCTTTAGGAAAAAGACCCAATCCTCCCCCTGTTT...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGAAACAGGGGGAGGATTaGGTCTTTTTCCTAAAGGAT +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRKQGED*VFFLKD
Trigger: ATCCTTTAGGAAAAAGACCCAATCCTCCCCCTGTTT...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp GTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGTCTACAGTGGTGCGCCTaGCTAATTTTTGTATTTTTA +
Preference number: 4 (lower is better)
Translates to: VEHQFSATFQESLKTDYCLQWCA*LIFVFL
Trigger: TAAAAATACAAAAATTAGCCAGGCGCACCACTGTAG...ACAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000380427.5
CDS-3UTR CCA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGAAATGTGCTTTTCAATaGGAAGAGGATGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMKCAFQ*EEDVVQ
Trigger: CTGGACCACATCCTCTTCCCATTGAAAAGCACATTT...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR CCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTAAATGTGCTTTTCAATaGGAAGAGGATGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIKCAFQ*EEDVVQ
Trigger: CTGGACCACATCCTCTTCCCATTGAAAAGCACATTT...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTACAAAGGGGAATATATaGGCATTGCCACTGAAATGG +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTITKGNI*ALPLKW
Trigger: CCATTTCAGTGGCAATGCCCATATATTCCCCTTTGT...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTATGAATCAGCAGCTGTaGCTTTATTTGAAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIMNQQL*LYLKEP
Trigger: AGGCTCCTTCAAATAAAGCCACAGCTGCTGATTCAT...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp GCCTTGTGTGTCAACATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAACTAGTTCTATCAATCTaGTATCTTCTGCTGAATCAA +
Preference number: 4 (lower is better)
Translates to: ALCVNILVNLYLNERRSKLVLSI*YLLLNQ
Trigger: TTGATTCAGCAGAAGATACCAGATTGATAGAACTAG...TTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAATGTTGACACACAAGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTACACTTGGCCCACTGTaGTGGATTTGTATAACATCT +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTITLGPL*WICITS
Trigger: AGATGTTATACAAATCCACCACAGTGGGCCAAGTGT...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATGACTGCATCTTCAACTaGATCTTGAGTAGAAAACAG +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHDCIFN*ILSRKQ
Trigger: CTGTTTTCTACTCAAGATCCAGTTGAAGATGCAGTC...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCCTGTTTTCAAGTCTCTaGACTGATTACTGTTACTAT +
Preference number: 4 (lower is better)
Translates to: FQMKSNPQALCVNILVNLLFSSL*TDYCYY
Trigger: ATAGTAACAGTAATCAGTCCAGAGACTTGAAAACAG...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATACAGAGGAAAAGTTCTaGGCTTTTCAGACTTCCATA +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHTEEKF*AFQTSI
Trigger: TATGGAAGTCTGAAAAGCCCAGAACTTTTCCTCTGT...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATAATATCTGTAAGCGGTaGTTTATCTCTCCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHNICKR*FISPSL
Trigger: AAGAGAGGGAGAGATAAACCACCGCTTACAGATATT...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR TCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAAGAAGAACCATGATCTaGTTTTTCAAAGTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRRRTMI*FFKVLP
Trigger: GGGCAAGACTTTGAAAAATCAGATCATGGTTCTTCT...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATCTGTTTCTTCAGTTATaGTCTGGTTATGTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHLFLQL*SGYVLG
Trigger: TCCCAAAACATAACCAGATCATAACTGAAGAAACAG...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAGTTCCTGATGAAGGTTaGTATTATCCCATAACAGCT +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRVPDEG*YYPITA
Trigger: AGCTGTTATGGGATAATATCAACCTTCATCAGGAAC...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTGTTCCTGATGAAGGTTaGTATTATCCCATAACAGCT +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIVPDEG*YYPITA
Trigger: AGCTGTTATGGGATAATATCAACCTTCATCAGGAAC...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAAGAACATTATTGTGCTaGATACTCTGCCTGATGGTT +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRRTLLC*ILCLMV
Trigger: AACCATCAGGCAGAGTATTCAGCACAATAATGTTCT...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGCCTTTCAAGAATCTCTaGAGACAGACTATTGTATGC +
Preference number: 4 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMPFKNL*RQTIVC
Trigger: GCATACAATAGTCTGTCTTCAGAGATTCTTGAAAGG...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR TCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGACCTTTCAAGAATCTCTaGAGACAGACTATTGTATGC +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRPFKNL*RQTIVC
Trigger: GCATACAATAGTCTGTCTTCAGAGATTCTTGAAAGG...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTGAATCTCTATTTAAATaGGAGGCGCTCCAAAACACT +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIESLFK*EALQNT
Trigger: AGTGTTTTGGAGCGCCTCTCATTTAAATAGAGATTC...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATGTTCTTCAGGCACATaGATTTCTGCATCATCCTTT +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRCSSGT*ISASSF
Trigger: AAAGGATGATGCAGAAATTCATGTGCCTGAAGAACA...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTACTTTTCCTGCTGTTaGCATCAAATATACCAGACG +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIYFSCC*HQIYQT
Trigger: CGTCTGGTATATTTGATGTCAACAGCAGGAAAAGTA...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATACTTTTCCTGCTGTTaGCATCAAATATACCAGACG +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRYFSCC*HQIYQT
Trigger: CGTCTGGTATATTTGATGTCAACAGCAGGAAAAGTA...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGTACTTTTCCTGCTGTTaGCATCAAATATACCAGACG +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRYFSCC*HQIYQT
Trigger: CGTCTGGTATATTTGATGTCAACAGCAGGAAAAGTA...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATGGGTTCTTGCAATATaGAGTAGAGAAGTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRWVLAI*SREVLG
Trigger: TCCTAAGACTTCTCTACTTCATATTGCAAGAACCCA...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGTGGGTTCTTGCAATATaGAGTAGAGAAGTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRWVLAI*SREVLG
Trigger: TCCTAAGACTTCTCTACTTCATATTGCAAGAACCCA...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTGAACTTATGCCTATATaGGTCAGGTTGTCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: LNARTYAYMSQVVFRDRIELMPI*VRLSLE
Trigger: CTCTAAAGACAACCTGACTCATATAGGCATAAGTTC...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR GCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAGATTTTTCAAAGTCTTaGCCTTTCATGCCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRDFSKS*PFMPLG
Trigger: TCCAAGAGGCATGAAAGGGCAAGACTTTGAAAAATC...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTGAAGAGGCAAGAAGTTaGTTTTACAGAATGGACAAG +
Preference number: 4 (lower is better)
Translates to: LNARTYAYMSQVVFRDRIEEARS*FYRMDK
Trigger: CTTGTCCATTCTGTAAAAGCAACTTCTTGCCTCTTC...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR GCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGGAAGAGGCAAGAAGTTaGTTTTACAGAATGGACAAG +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQREEARS*FYRMDK
Trigger: CTTGTCCATTCTGTAAAAGCAACTTCTTGCCTCTTC...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATCATTTGCCAATGGAATaGTTCCACTTTGTAAACTGT +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHHLPME*FHFVNC
Trigger: ACAGTTTACAAAGTGGAAGCATTCCATTGGCAAATG...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGGAATATACACAAGTTTaGTATCCTGGGACAGAGATG +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQREYTQV*YPGTEM
Trigger: CATCTCTGTCCCAGGATAGCAAACTTGTGTATATTC...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATGGAGCATCAATTTTCTaGAACCTTTCAAGAATCTCT +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHGASIF*NLSRIS
Trigger: AGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCC...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTAAGGGTATAGAATTTTaGATAGGCACGATCTCGACT +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIKGIEF*IGTIST
Trigger: AGTCGAGATCGTGCCTATGCAAAATTCTATACCCTT...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR GCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGAATAAGTACATCATATaGCTGCTGAAGTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRNKYII*LLKCSD
Trigger: GTCAGAGCACTTCAGCAGGCATATGATGTACTTATT...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR GCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTAATAAGTACATCATATaGCTGCTGAAGTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTINKYII*LLKCSD
Trigger: GTCAGAGCACTTCAGCAGGCATATGATGTACTTATT...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR GCA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAAGGCACATGAATTTCTaGATCATCCTTTATAAGTTC +
Preference number: 4 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKRHMNF*IILYKF
Trigger: GAACTTATAAAGGATGATGCAGAAATTCATGTGCCT...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATCTTAAGCAACATTCCTaGTCGACTTTCAGAACTAAA +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHLKQHS*STFRTK
Trigger: TTTAGTTCTGAAAGTCGAGCAGGAATGTTGCTTAAG...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAAGTTTTTGTCAACTTTaGAGAAGGTATGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRSFCQL*RRYEEE
Trigger: CTCCTCCTCATACCTTCTGCAAAGTTGACAAAAACT...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTTCAGGACATCTATCTTaGGCCCTGAGAGTATATTAT +
Preference number: 4 (lower is better)
Translates to: LNARTYAYMSQVVFRDRISGHLS*ALRVYY
Trigger: ATAATATACTCTCAGGGCCCAAGATAGATGTCCTGA...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATCAGGACATCTATCTTaGGCCCTGAGAGTATATTAT +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRSGHLS*ALRVYY
Trigger: ATAATATACTCTCAGGGCCCAAGATAGATGTCCTGA...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGTGGAACTTCACCTGTTaGATAATGCAGTTTTCCTAC +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRWNFTC*IMQFSY
Trigger: GTAGGAAAACTGCATTATCCAACAGGTGAAGTTCCA...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAGATCTGGTTATGTTTTaGGAAGTCCATAAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGDLVMF*EVHKVD
Trigger: ATCAACTTTATGGACTTCCCAAAACATAACCAGATC...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTATACAGAGGTTCTCTTaGTTCCTGATGAAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIIQRFS*FLMKVD
Trigger: ATCAACCTTCATCAGGAACCAAGAGAACCTCTGTAT...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATCTACAGTGGTGCGCCTaGCTAATTTTTGTATTTTTA +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHLQWCA*LIFVFL
Trigger: TAAAAATACAAAAATTAGCCAGGCGCACCACTGTAG...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGAATATTAATGCATCATaGACTGACAGCTGGACAAGG +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRNINAS*TDSWTR
Trigger: CCTTGTCCAGCTGTCAGTCCATGATGCATTAATATT...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAACAACATCTTGTGGTaGGTCATGAAGATCAAAATA +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGNNILW*VMKIKI
Trigger: TATTTTGATCTTCATGACCCACCACAAGATGTTGTT...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAGCAAACAACATCTTGTaGTGGGTCATGAAGATCAAA +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRANNIL*WVMKIK
Trigger: TTTGATCTTCATGACCCACCACAAGATGTTGTTTGC...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTGCAAACAACATCTTGTaGTGGGTCATGAAGATCAAA +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIANNIL*WVMKIK
Trigger: TTTGATCTTCATGACCCACCACAAGATGTTGTTTGC...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGAGGAGCCTCTGTGATTaGTCTGAGATATGTTCTATA +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRRSLCD*SEICSI
Trigger: TATAGAACATATCTCAGACCAATCACAGAGGCTCCT...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTCTTAGCCATGAGAGGTaGACTCTTTGTAATGCTATT +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTILSHER*TLCNAI
Trigger: AATAGCATTACAAAGAGTCCACCTCTCATGGCTAAG...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGGACTGCATCTTCAACTaGATCTTGAGTAGAAAACAG +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRDCIFN*ILSRKQ
Trigger: CTGTTTTCTACTCAAGATCCAGTTGAAGATGCAGTC...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGATATTCCTCAGATCTTTaGATACTGTTTTCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGYSSDL*ILFSSL
Trigger: GAGACTTGAAAACAGTATCCAAAGATCTGAGGAATA...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTAGAACATTTCGCCTCTaGAAACTGGCAATGACTATA +
Preference number: 4 (lower is better)
Translates to: LNARTYAYMSQVVFRDRIRTFRL*KLAMTI
Trigger: TATAGTCATTGCCAGTTTCCAGAGGCGAAATGTTCT...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CCA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGGTAGTCTGTCACTCTTaGTCCTTTGTCTTCTATCAT +
Preference number: 4 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMVVCHS*SFVFYH
Trigger: ATGATAGAAGACAAAGGACCAAGAGTGACAGACTAC...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR CCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGGTAGTCTGTCACTCTTaGTCCTTTGTCTTCTATCAT +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRVVCHS*SFVFYH
Trigger: ATGATAGAAGACAAAGGACCAAGAGTGACAGACTAC...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTAATATCTGTAAGCGGTaGTTTATCTCTCCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTINICKR*FISPSL
Trigger: AAGAGAGGGAGAGATAAACCACCGCTTACAGATATT...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR TCA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTCTGTTTCTTCAGTTATaGTCTGGTTATGTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: LNARTYAYMSQVVFRDRILFLQL*SGYVLG
Trigger: TCCCAAAACATAACCAGATCATAACTGAAGAAACAG...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR TCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTATTAAAATTCCTCCATaGGACATACAGAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIIKIPP*DIQRFS
Trigger: AGAGAACCTCTGTATGTCTCATGGAGGAATTTTAAT...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGATTAAAATTCCTCCATaGGACATACAGAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRIKIPP*DIQRFS
Trigger: AGAGAACCTCTGTATGTCTCATGGAGGAATTTTAAT...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR TCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTCTCTTCGCCAATTTATaGGCTGTTTTTATTTCCTGT +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTILFANL*AVFISC
Trigger: ACAGGAAATAAAAACAGCTCATAAATTGGCGAAGAG...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR TCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGGATAGCCATTTCACTTaGATTCGAATCCAAACTACT +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRDSHFT*IRIQTT
Trigger: AGTAGTTTGGATTCGAATTCAAGTGAAATGGCTATC...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAATCAGCCAGATTACGTaGAATAACTGGAGAAAACAA +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRISQIT*NNWRKQ
Trigger: TTGTTTTCTCCAGTTATTGCACGTAATCTGGCTGAT...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGACATCAAAACCTCCATTaGACAATTCTGATAGATGCT +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRHQNLH*TILIDA
Trigger: AGCATCTATCAGAATTGTGCAATGGAGGTTTTGATG...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATAGGCACATGAATTTCTaGATCATCCTTTATAAGTTC +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHRHMNF*IILYKF
Trigger: GAACTTATAAAGGATGATGCAGAAATTCATGTGCCT...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTCTTAAGCAACATTCCTaGTCGACTTTCAGAACTAAA +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTILKQHS*STFRTK
Trigger: TTTAGTTCTGAAAGTCGAGCAGGAATGTTGCTTAAG...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGTTCACACTAGAATTCTaGATAGGTCAGATTAACCCT +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRFTLEF*IGQINP
Trigger: AGGGTTAATCTGACCTATGCAGAATTCTAGTGTGAA...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR CCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATGATCTGGTTATGTTTTaGGAAGTCCATAAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHDLVMF*EVHKVD
Trigger: ATCAACTTTATGGACTTCCCAAAACATAACCAGATC...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTTCTTCAGTTATGATCTaGTTATGTTTTGGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LNARTYAYMSQVVFRDRISSVMI*LCFGKS
Trigger: GGACTTCCCAAAACATAACCAGATCATAACTGAAGA...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTCTTCAGTTATGATCTaGTTATGTTTTGGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTISSVMI*LCFGKS
Trigger: GGACTTCCCAAAACATAACCAGATCATAACTGAAGA...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTCTACAGTGGTGCGCCTaGCTAATTTTTGTATTTTTA +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTILQWCA*LIFVFL
Trigger: TAAAAATACAAAAATTAGCCAGGCGCACCACTGTAG...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CCA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATTATTCCTCAGATCTTTaGATACTGTTTTCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: GLKIFNINKPWDIQMALHYSSDL*ILFSSL
Trigger: GAGACTTGAAAACAGTATCCAAAGATCTGAGGAATA...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
3UTR CAA 72 bp CTTGAATGTTTCCAGATGAAATCTAATCCCCAAGCCTaGTGTGTCAACATTCTAGTGAATCTCTATTTAAAT +
Preference number: 4 (lower is better)
Translates to: LECFQMKSNPQA*CVNILVNLYLN
Trigger: ATTTAAATAGAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAAACATTCAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR GCA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGATATGTATCTACTGTTaGAGTAGTTTTAGGTACGTC +
Preference number: 4 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMICIYC*SSFRYV
Trigger: GACGTACCTAAAACTACTGCAACAGTAGATACATAT...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR GCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTATATGTATCTACTGTTaGAGTAGTTTTAGGTACGTC +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIICIYC*SSFRYV
Trigger: GACGTACCTAAAACTACTGCAACAGTAGATACATAT...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR GCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTATACTCTCAGACAGTaGAAAAGATCCATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIYTLRQ*KRSILK
Trigger: CTTCAAAATGGATCTTTTGCACTGTCTGAGAGTATA...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR CCA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTGATCTGGTTATGTTTTaGGAAGTCCATAAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: LNARTYAYMSQVVFRDRIDLVMF*EVHKVD
Trigger: ATCAACTTTATGGACTTCCCAAAACATAACCAGATC...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTGATCTGGTTATGTTTTaGGAAGTCCATAAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIDLVMF*EVHKVD
Trigger: ATCAACTTTATGGACTTCCCAAAACATAACCAGATC...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTAACAACATCTTGTGGTaGGTCATGAAGATCAAAATA +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTINNILW*VMKIKI
Trigger: TATTTTGATCTTCATGACCCACCACAAGATGTTGTT...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGACTAGTTCTATCAATCTaGTATCTTCTGCTGAATCAA +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRLVLSI*YLLLNQ
Trigger: TTGATTCAGCAGAAGATACCAGATTGATAGAACTAG...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGCTAGTTCTATCAATCTaGTATCTTCTGCTGAATCAA +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRLVLSI*YLLLNQ
Trigger: TTGATTCAGCAGAAGATACCAGATTGATAGAACTAG...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGACTTAAGGTCCAGTCTTaGAAAGTATTTGTAACTGTA +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRLKVQS*KVFVTV
Trigger: TACAGTTACAAATACTTTCCAAGACTGGACCTTAAG...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGCTGTTTTCAAGTCTCTaGACTGATTACTGTTACTAT +
Preference number: 4 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRLFSSL*TDYCYY
Trigger: ATAGTAACAGTAATCAGTCCAGAGACTTGAAAACAG...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGACTGTTTTCAAGTCTCTaGACTGATTACTGTTACTAT +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRLFSSL*TDYCYY
Trigger: ATAGTAACAGTAATCAGTCCAGAGACTTGAAAACAG...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTCTGTTTTCAAGTCTCTaGACTGATTACTGTTACTAT +
Preference number: 4 (lower is better)
Translates to: YILSPRVTSIPYSPVLTILFSSL*TDYCYY
Trigger: ATAGTAACAGTAATCAGTCCAGAGACTTGAAAACAG...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CCA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATATTCCTCAGATCTTTaGATACTGTTTTCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRYSSDL*ILFSSL
Trigger: GAGACTTGAAAACAGTATCCAAAGATCTGAGGAATA...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCAGTGATCCACCCACCTaGCTCAGCCTCCCAAAGTGC +
Preference number: 5 (lower is better)
Translates to: GVISTHCSLCLSSSDSPASDPPT*LSLPKC
Trigger: GCACTTTGGGAGGCTGAGCAAGGTGGGTGGATCACT...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCTCACCCAAGCTGGAGTaGCAGTGGCGTGATCTCCAC +
Preference number: 5 (lower is better)
Translates to: GVISTHCSLCLSSSDSPASPKLE*QWRDLH
Trigger: GTGGAGATCACGCCACTGCAACTCCAGCTTGGGTGA...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCGCTGCTGTGAGAATCTaGGCATCTGCTCCCATCATG +
Preference number: 5 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAAAVRI*ASAPIM
Trigger: CATGATGGGAGCAGATGCCAAGATTCTCACAGCAGC...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCCTGCCAAGACTTGTGTaGCTCTGGGTAAGTTCACTG +
Preference number: 5 (lower is better)
Translates to: GVISTHCSLCLSSSDSPALPRLV*LWVSSL
Trigger: CAGTGAACTTACCCAGAGCAACACAAGTCTTGGCAG...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCGCCCTTTCATGCCTCTaGGAAATGGAACTTCACCTG +
Preference number: 5 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAALSCL*EMELHL
Trigger: CAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGGC...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCAGGCTCAAGGAGTTCTaGGCTTTCCTCAAGCATCTC +
Preference number: 5 (lower is better)
Translates to: GVISTHCSLCLSSSDSPARLKEF*AFLKHL
Trigger: GAGATGCTTGAGGAAAGCCAAGAACTCCTTGAGCCT...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCGAAACAGGGGGAGGATaGGGTCTTTTTCCTAAAGGA +
Preference number: 5 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAETGGG*GLFPKG
Trigger: TCCTTTAGGAAAAAGACCCAATCCTCCCCCTGTTTC...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCACTGGAAGTGGATATTaGGTTTCAGGATCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: GVISTHCSLCLSSSDSPATGSGY*VSGSQH
Trigger: GTGCTGGGATCCTGAAACCAAATATCCACTTCCAGT...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCGTCACTCTTGGTCCTTaGTCTTCTATCATGGCTGCT +
Preference number: 5 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAVTLGP*SSIMAA
Trigger: AGCAGCCATGATAGAAGACAAAGGACCAAGAGTGAC...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCAGCAAGGTGCTAAAGTaGGCTCCACTTAGTGGTAAA +
Preference number: 5 (lower is better)
Translates to: GVISTHCSLCLSSSDSPASKVLK*APLSGK
Trigger: TTTACCACTAAGTGGAGCCAACTTTAGCACCTTGCT...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCCGGCTTTTTGGGAAGTaGCTTCCAGTTCATGTTCTT +
Preference number: 5 (lower is better)
Translates to: GVISTHCSLCLSSSDSPARLFGK*LPVHVL
Trigger: AAGAACATGAACTGGAAGCAACTTCCCAAAAAGCCG...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCGCGCAAAAATGCCTCTaGAATTTCCATCTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAAQKCL*NFHLKL
Trigger: CAGCTTGAGATGGAAATTCAAGAGGCATTTTTGCGC...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCGGGAATATATGGGCATaGCCACTGAAATGGAAAGAT +
Preference number: 5 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAGNIWA*PLKWKD
Trigger: ATCTTTCCATTTCAGTGGCAATGCCCATATATTCCC...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCGTGCTAAGTAGATTTTaGCACGGCTTTTTGGGAAGT +
Preference number: 5 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAVLSRF*HGFLGS
Trigger: ACTTCCCAAAAAGCCGTGCAAAAATCTACTTAGCAC...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCAAAGGGTATAGAATTTaGCATAGGCACGATCTCGAC +
Preference number: 5 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAKGYRI*HRHDLD
Trigger: GTCGAGATCGTGCCTATGCAAAATTCTATACCCTTT...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCCTATCACCATTCTTCTaGAGATTAGTAGCTTCGCCA +
Preference number: 5 (lower is better)
Translates to: GVISTHCSLCLSSSDSPALSPFF*RLVASP
Trigger: TGGCGAAGCTACTAATCTCAAGAAGAATGGTGATAG...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp GTGTGCTCCCCATTGTTAGCATCATTAGAACTATCCACACTACCGTGGCTCACCGAGGGGGTTTGCTGCTaGAAACGCCCAGTAAAAGTT +
Preference number: 5 (lower is better)
Translates to: VCSPLLASLELSTLPWLTEGVCC*KRPVKV
Trigger: AACTTTTACTGGGCGTTTCAAGCAGCAAACCCCCTC...GGTGAGCCACGGTAGTGTGGATAGTTCTAATGATGCTAACAATGGGGAGCACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CAA 90 bp TTTTTAAGCGGCTGCCTAAACTGTGCCAAGCCACGTACCACATTCCGTACCTTCGCCCTTTCATGCCTCTaGGAAATGGAACTTCACCTG +
Preference number: 5 (lower is better)
Translates to: FLSGCLNCAKPRTTFRTFALSCL*EMELHL
Trigger: CAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGGC...GAAGGTACGGAATGTGGTACGTGGCTTGGCACAGTTTAGGCAGCCGCTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CAA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCAGAAGAGGCAAGAAGTaGCTTTTACAGAATGGACAA +
Preference number: 5 (lower is better)
Translates to: GVISTHCSLCLSSSDSPARRGKK*LLQNGQ
Trigger: TTGTCCATTCTGTAAAAGCAACTTCTTGCCTCTTCT...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCGTTTCAGGAAAAAGCTaGCAGAACCTCTCAAATCTT +
Preference number: 5 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAVSGKS*QNLSNL
Trigger: AAGATTTGAGAGGTTCTGCAAGCTTTTTCCTGAAAC...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTGCTGCTGTGAGAATCTaGGCATCTGCTCCCATCATG +
Preference number: 5 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFAAVRI*ASAPIM
Trigger: CATGATGGGAGCAGATGCCAAGATTCTCACAGCAGC...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CAA 90 bp GGCGTGATCTCCACTCACTGTAGCCTCTGCCTCAGTTCAAGCGATTCTCCTGCCTATATGCTATTGCATTaGAAGCAGGTACAGACTTCT +
Preference number: 5 (lower is better)
Translates to: GVISTHCSLCLSSSDSPAYMLLH*KQVQTS
Trigger: AGAAGTCTGTACCTGCTTCAAATGCAATAGCATATA...GGCAGGAGAATCGCTTGAACTGAGGCAGAGGCTACAGTGAGTGGAGATCACGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTGAAACAGGGGGAGGATaGGGTCTTTTTCCTAAAGGA +
Preference number: 5 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFETGGG*GLFPKG
Trigger: TCCTTTAGGAAAAAGACCCAATCCTCCCCCTGTTTC...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CAA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTACTCGACACTGGCACTaGGTGGAGCATCAATTTTCT +
Preference number: 5 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFTRHWH*VEHQFS
Trigger: AGAAAATTGATGCTCCACCAAGTGCCAGTGTCGAGT...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CAA 90 bp GCCTTGTGTGTCAACATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAAAGTGATCCACCCACCTaGCTCAGCCTCCCAAAGTGC +
Preference number: 5 (lower is better)
Translates to: ALCVNILVNLYLNERRSKSDPPT*LSLPKC
Trigger: GCACTTTGGGAGGCTGAGCAAGGTGGGTGGATCACT...TTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAATGTTGACACACAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380427.5
CDS-3UTR CAA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCTCACCCAAGCTGGAGTaGCAGTGGCGTGATCTCCAC +
Preference number: 5 (lower is better)
Translates to: FQMKSNPQALCVNILVNLSPKLE*QWRDLH
Trigger: GTGGAGATCACGCCACTGCAACTCCAGCTTGGGTGA...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp TTTTTAAGCGGCTGCCTAAACTGTGCCAAGCCACGTACCACATTCCGTACCTTCAGCAAGGTGCTAAAGTaGGCTCCACTTAGTGGTAAA +
Preference number: 5 (lower is better)
Translates to: FLSGCLNCAKPRTTFRTFSKVLK*APLSGK
Trigger: TTTACCACTAAGTGGAGCCAACTTTAGCACCTTGCT...GAAGGTACGGAATGTGGTACGTGGCTTGGCACAGTTTAGGCAGCCGCTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS TCA 90 bp CTACCGTGGCTCACCGTGTCCCCATCACTTCCACCTGTGACATTTTaGAGAGCTAAAGATAAGGACAATAGCAGTTCAATAACTCATGCA +
Preference number: 5 (lower is better)
Translates to: LPWLTVSPSLPPVTF*RAKDKDNSSSITHA
Trigger: TGCATGAGTTATTGAACTGCTATTGTCCTTATCTTTAGCTCTTCAAAATGTCACAGGTGGAAGTGATGGGGACACGGTGAGCCACGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380437.8
ENST00000602442.1
CDS TCA 90 bp TTCTGGGCTTTTCAGACTTCCATAGTTCAAGTTTGCTTGGAGAGCTaGTGGAGTGGCTTCTACACAGGTGTAACCTTCAGGTACTGTTTC +
Preference number: 5 (lower is better)
Translates to: FWAFQTSIVQVCLES*WSGFYTGVTFRYCF
Trigger: GAAACAGTACCTGAAGGTTACACCTGTGTAGAAGCCACTCCATCAGCTCTCCAAGCAAACTTGAACTATGGAAGTCTGAAAAGCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000602708.1
ENST00000602925.5
CDS-3UTR CAA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAGTTCGAGAGGGGGTTaGCTGCTTGAAACGCCCAGT +
Preference number: 5 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGSSRGG*LLETPS
Trigger: ACTGGGCGTTTCAAGCAGCAAACCCCCTCTCGAACT...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAAGTTCGAGAGGGGGTTaGCTGCTTGAAACGCCCAGT +
Preference number: 5 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKSSRGG*LLETPS
Trigger: ACTGGGCGTTTCAAGCAGCAAACCCCCTCTCGAACT...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp AAGAATTTACTACAGAACCCAACGAGCCATGTGGCGAAGAACGCACCAGTGCTGACATCAAAACCTCCATaGCACAATTCTGATAGATGC +
Preference number: 5 (lower is better)
Translates to: KNLLQNPTSHVAKNAPVLTSKPP*HNSDRC
Trigger: GCATCTATCAGAATTGTGCAATGGAGGTTTTGATGT...CAGCACTGGTGCGTTCTTCGCCACATGGCTCGTTGGGTTCTGTAGTAAATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CAA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATAGTGATCCACCCACCTaGCTCAGCCTCCCAAAGTGC +
Preference number: 5 (lower is better)
Translates to: GLKIFNINKPWDIQMALHSDPPT*LSLPKC
Trigger: GCACTTTGGGAGGCTGAGCAAGGTGGGTGGATCACT...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTGTGCTAAGTAGATTTTaGCACGGCTTTTTGGGAAGT +
Preference number: 5 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFVLSRF*HGFLGS
Trigger: ACTTCCCAAAAAGCCGTGCAAAAATCTACTTAGCAC...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CAA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTCTATCACCATTCTTCTaGAGATTAGTAGCTTCGCCA +
Preference number: 5 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFLSPFF*RLVASP
Trigger: TGGCGAAGCTACTAATCTCAAGAAGAATGGTGATAG...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CAA 90 bp AAGATTCAAGTTCTTTACGGAGTACTAGAGGACTCAAGTAGGGCACAGAAACAGAGGCTCAAGGAGTTCTaGGCTTTCCTCAAGCATCTC +
Preference number: 5 (lower is better)
Translates to: KIQVLYGVLEDSSRAQKQRLKEF*AFLKHL
Trigger: GAGATGCTTGAGGAAAGCCAAGAACTCCTTGAGCCT...CTGTTTCTGTGCCCTACTTGAGTCCTCTAGTACTCCGTAAAGAACTTGAATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CAA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCCTTAGACCCGTATCCTaGGTCAGACTGACCACCTGT +
Preference number: 5 (lower is better)
Translates to: FQMKSNPQALCVNILVNLLRPVS*VRLTTC
Trigger: ACAGGTGGTCAGTCTGACCAAGGATACGGGTCTAAG...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR CAA 90 bp TTCCCAGTAGGGTGTCTACTAAAACAAAGTTTCAACTCCTGCGGTCTGTCAAAAGGCTACTGTCGCTGCTaGTTTCATACCAGATTTCAG +
Preference number: 5 (lower is better)
Translates to: FPVGCLLKQSFNSCGLSKGYCRC*FHTRFQ
Trigger: CTGAAATCTGGTATGAAACAAGCAGCGACAGTAGCC...TTTTGACAGACCGCAGGAGTTGAAACTTTGTTTTAGTAGACACCCTACTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CAA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCCTGCCAAGACTTGTGTaGCTCTGGGTAAGTTCACTG +
Preference number: 5 (lower is better)
Translates to: FQMKSNPQALCVNILVNLLPRLV*LWVSSL
Trigger: CAGTGAACTTACCCAGAGCAACACAAGTCTTGGCAG...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCGCCCTTTCATGCCTCTaGGAAATGGAACTTCACCTG +
Preference number: 5 (lower is better)
Translates to: FQMKSNPQALCVNILVNLALSCL*EMELHL
Trigger: CAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGGC...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GCACACCTGTTTAGTTCTCTTAGCCATGAGAGGTGGACTCTTTGTAATGCTATTGCTCCAAGGATTCATTaGCCAATGGAATGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: AHLFSSLSHERWTLCNAIAPRIH*PMECFH
Trigger: GTGGAAGCATTCCATTGGCAAATGAATCCTTGGAGC...AATAGCATTACAAAGAGTCCACCTCTCATGGCTAAGAGAACTAAACAGGTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CAA 90 bp TTTTTAAGCGGCTGCCTAAACTGTGCCAAGCCACGTACCACATTCCGTACCTTCTGCTGTGAAAGTAGGTaGATGGGTTTAAGAACATTA +
Preference number: 5 (lower is better)
Translates to: FLSGCLNCAKPRTTFRTFCCESR*MGLRTL
Trigger: TAATGTTCTTAAACCCATCAACCTACTTTCACAGCA...GAAGGTACGGAATGTGGTACGTGGCTTGGCACAGTTTAGGCAGCCGCTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CAA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTAGTGATCCACCCACCTaGCTCAGCCTCCCAAAGTGC +
Preference number: 5 (lower is better)
Translates to: YILSPRVTSIPYSPVLTISDPPT*LSLPKC
Trigger: GCACTTTGGGAGGCTGAGCAAGGTGGGTGGATCACT...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATCACCCAAGCTGGAGTaGCAGTGGCGTGATCTCCAC +
Preference number: 5 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRSPKLE*QWRDLH
Trigger: GTGGAGATCACGCCACTGCAACTCCAGCTTGGGTGA...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp ACATCAAATATACCAGACGGAACTTTCACAATACTGCTGCCCCATGCAGGAGGTACTGTGTGCTCCCCATaGTTAGCATCATTAGAACTA +
Preference number: 5 (lower is better)
Translates to: TSNIPDGTFTILLPHAGGTVCSP*LASLEL
Trigger: TAGTTCTAATGATGCTAACAATGGGGAGCACACAGT...ACCTCCTGCATGGGGCAGCAGTATTGTGAAAGTTCCGTCTGGTATATTTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CAA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAGCTGCTGTGAGAATCTaGGCATCTGCTCCCATCATG +
Preference number: 5 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKAAVRI*ASAPIM
Trigger: CATGATGGGAGCAGATGCCAAGATTCTCACAGCAGC...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTCAAAGCTATGGGTTCTaGCAATATGAAGTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFQSYGF*QYEVEK
Trigger: CTTCTCTACTTCATATTGCAAGAACCCATAGCTTTG...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CAA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAAGTTCGAGAGGGGGTTaGCTGCTTGAAACGCCCAGT +
Preference number: 5 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRSSRGG*LLETPS
Trigger: ACTGGGCGTTTCAAGCAGCAAACCCCCTCTCGAACT...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTAGTTCGAGAGGGGGTTaGCTGCTTGAAACGCCCAGT +
Preference number: 5 (lower is better)
Translates to: LNARTYAYMSQVVFRDRISSRGG*LLETPS
Trigger: ACTGGGCGTTTCAAGCAGCAAACCCCCTCTCGAACT...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CAA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGAGTTCGAGAGGGGGTTaGCTGCTTGAAACGCCCAGT +
Preference number: 5 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRSSRGG*LLETPS
Trigger: ACTGGGCGTTTCAAGCAGCAAACCCCCTCTCGAACT...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTAGTTCGAGAGGGGGTTaGCTGCTTGAAACGCCCAGT +
Preference number: 5 (lower is better)
Translates to: YILSPRVTSIPYSPVLTISSRGG*LLETPS
Trigger: ACTGGGCGTTTCAAGCAGCAAACCCCCTCTCGAACT...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGCTGCCAAGACTTGTGTaGCTCTGGGTAAGTTCACTG +
Preference number: 5 (lower is better)
Translates to: LVFKGQVYISQKENISPLLPRLV*LWVSSL
Trigger: CAGTGAACTTACCCAGAGCAACACAAGTCTTGGCAG...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CAA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAGCCCTTTCATGCCTCTaGGAAATGGAACTTCACCTG +
Preference number: 5 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGALSCL*EMELHL
Trigger: CAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGGC...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GCCTTGTGTGTCAACATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAAGCTCCAAGGATTCATTaGCCAATGGAATGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: ALCVNILVNLYLNERRSKAPRIH*PMECFH
Trigger: GTGGAAGCATTCCATTGGCAAATGAATCCTTGGAGC...TTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAATGTTGACACACAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CAA 90 bp GGTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGACTCGACACTGGCACTaGGTGGAGCATCAATTTTCT +
Preference number: 5 (lower is better)
Translates to: GGASIFCNLSRISEDRLLTRHWH*VEHQFS
Trigger: AGAAAATTGATGCTCCACCAAGTGCCAGTGTCGAGT...CAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CAA 90 bp ATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAAACACTTCCTGCACCAACTGGAAGTGGATATTaGGTTTCAGGATCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: ILVNLYLNERRSKTLPAPTGSGY*VSGSQH
Trigger: GTGCTGGGATCCTGAAACCAAATATCCACTTCCAGT...TGGTGCAGGAAGTGTTTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CAA 90 bp GCACACCTGTTTAGTTCTCTTAGCCATGAGAGGTGGACTCTTTGTAATGCTATTCGGCTTTTTGGGAAGTaGCTTCCAGTTCATGTTCTT +
Preference number: 5 (lower is better)
Translates to: AHLFSSLSHERWTLCNAIRLFGK*LPVHVL
Trigger: AAGAACATGAACTGGAAGCAACTTCCCAAAAAGCCG...AATAGCATTACAAAGAGTCCACCTCTCATGGCTAAGAGAACTAAACAGGTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CAA 90 bp AAGATTCAAGTTCTTTACGGAGTACTAGAGGACTCAAGTAGGGCACAGAAACAGTTTTTGCACGGCTTTTaGGGAAGTTGCTTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: KIQVLYGVLEDSSRAQKQFLHGF*GSCFQF
Trigger: GAACTGGAAGCAACTTCCCAAAAAGCCGTGCAAAAA...CTGTTTCTGTGCCCTACTTGAGTCCTCTAGTACTCCGTAAAGAACTTGAATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CAA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATGCTGCTGTGAGAATCTaGGCATCTGCTCCCATCATG +
Preference number: 5 (lower is better)
Translates to: GLKIFNINKPWDIQMALHAAVRI*ASAPIM
Trigger: CATGATGGGAGCAGATGCCAAGATTCTCACAGCAGC...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAAGGCTCAAGGAGTTCTaGGCTTTCCTCAAGCATCTC +
Preference number: 5 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKRLKEF*AFLKHL
Trigger: GAGATGCTTGAGGAAAGCCAAGAACTCCTTGAGCCT...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TCCAAAACACTTCCTGCACCACTCGACACTGGCACTTGGTGGAGCATCAATTTTGCAATTCCATATTCATaGTCAAATGCCTCTTTGTCT +
Preference number: 5 (lower is better)
Translates to: SKTLPAPLDTGTWWSINFAIPYS*SNASLS
Trigger: AGACAAAGAGGCATTTGACAATGAATATGGAATTGC...AAAATTGATGCTCCACCAAGTGCCAGTGTCGAGTGGTGCAGGAAGTGTTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380427.5
CDS-3UTR CAA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGGTACCCTTTGATACCTaGGTTCAACTGCAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: LVFKGQVYISQKENISPLVPFDT*VQLQSL
Trigger: CAGGCTCTGCAGTTGAACCAAGGTATCAAAGGGTAC...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS TCA 90 bp AGTGGCTTCTACACAGGTGTAACCTTCAGGTACTGTTTCTCCAGCTaGTTTGATAATAATGGCAATGTCTGTAATTGGAGCTTTAGGTCC +
Preference number: 5 (lower is better)
Translates to: SGFYTGVTFRYCFSS*FDNNGNVCNWSFRS
Trigger: GGACCTAAAGCTCCAATTACAGACATTGCCATTATTATCAAATCAGCTGGAGAAACAGTACCTGAAGGTTACACCTGTGTAGAAGCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000602708.1
ENST00000602925.5
CDS-3UTR CAA 90 bp GGTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGGATCTAAAGGTAGGCTaGATCTCCTCTCTAGAGCAT +
Preference number: 5 (lower is better)
Translates to: GGASIFCNLSRISEDRLLDLKVG*ISSLEH
Trigger: ATGCTCTAGAGAGGAGATCAAGCCTACCTTTAGATC...CAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CAA 90 bp CCTGAGAGTATATTATCCAGCTTTAGCCCTGACAAAGAATTTACTACAGAACCCGATCTAAAGGTAGGCTaGATCTCCTCTCTAGAGCAT +
Preference number: 5 (lower is better)
Translates to: PESILSSFSPDKEFTTEPDLKVG*ISSLEH
Trigger: ATGCTCTAGAGAGGAGATCAAGCCTACCTTTAGATC...GGGTTCTGTAGTAAATTCTTTGTCAGGGCTAAAGCTGGATAATATACTCTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CAA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATGAGGGGGTTTGCTGCTaGAAACGCCCAGTAAAAGTT +
Preference number: 5 (lower is better)
Translates to: GLKIFNINKPWDIQMALHEGVCC*KRPVKV
Trigger: AACTTTTACTGGGCGTTTCAAGCAGCAAACCCCCTC...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGGGCTACTGTCGCTGCTaGTTTCATACCAGATTTCAG +
Preference number: 5 (lower is better)
Translates to: LVFKGQVYISQKENISPLGYCRC*FHTRFQ
Trigger: CTGAAATCTGGTATGAAACAAGCAGCGACAGTAGCC...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CAA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTTGTCACCAGAGGTACTaGGTTTCAGGAAAAAGCTTG +
Preference number: 5 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGCHQRY*VSGKSL
Trigger: CAAGCTTTTTCCTGAAACCAAGTACCTCTGGTGACA...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR CAA 90 bp GCCTTGTGTGTCAACATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAATGTCACCAGAGGTACTaGGTTTCAGGAAAAAGCTTG +
Preference number: 5 (lower is better)
Translates to: ALCVNILVNLYLNERRSKCHQRY*VSGKSL
Trigger: CAAGCTTTTTCCTGAAACCAAGTACCTCTGGTGACA...TTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAATGTTGACACACAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CAA 90 bp CCTGAGAGTATATTATCCAGCTTTAGCCCTGACAAAGAATTTACTACAGAACCCTGTCACCAGAGGTACTaGGTTTCAGGAAAAAGCTTG +
Preference number: 5 (lower is better)
Translates to: PESILSSFSPDKEFTTEPCHQRY*VSGKSL
Trigger: CAAGCTTTTTCCTGAAACCAAGTACCTCTGGTGACA...GGGTTCTGTAGTAAATTCTTTGTCAGGGCTAAAGCTGGATAATATACTCTCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CAA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGGCTCCAAGGATTCATTaGCCAATGGAATGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: LVFKGQVYISQKENISPLAPRIH*PMECFH
Trigger: GTGGAAGCATTCCATTGGCAAATGAATCCTTGGAGC...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CAA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAGCTCCAAGGATTCATTaGCCAATGGAATGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGAPRIH*PMECFH
Trigger: GTGGAAGCATTCCATTGGCAAATGAATCCTTGGAGC...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCGGGAAGTCCATAAAGTaGATCAAGTCAGGTTCTGCT +
Preference number: 5 (lower is better)
Translates to: FQMKSNPQALCVNILVNLGKSIK*IKSGSA
Trigger: AGCAGAACCTGACTTGATCAACTTTATGGACTTCCC...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GCCTTGTGTGTCAACATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAATCTAATCCCCAAGCCTaGTGTGTCAACATTCTAGTG +
Preference number: 5 (lower is better)
Translates to: ALCVNILVNLYLNERRSKSNPQA*CVNILV
Trigger: CACTAGAATGTTGACACACAAGGCTTGGGGATTAGA...TTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAATGTTGACACACAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CAA 90 bp TGCCTGATGGTTTCTACTAAAGTGCTTGTTTCTTGTTGTTCCTCTGACAGGAGAGGGAATATATGGGCATaGCCACTGAAATGGAAAGAT +
Preference number: 5 (lower is better)
Translates to: CLMVSTKVLVSCCSSDRRGNIWA*PLKWKD
Trigger: ATCTTTCCATTTCAGTGGCAATGCCCATATATTCCC...TCTCCTGTCAGAGGAACAACAAGAAACAAGCACTTTAGTAGAAACCATCAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CAA 90 bp GCCTTGTGTGTCAACATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAACTGTGTCATCTTCTTTaGCCAGGAGAAATCTGCTTC +
Preference number: 5 (lower is better)
Translates to: ALCVNILVNLYLNERRSKLCHLL*PGEICF
Trigger: GAAGCAGATTTCTCCTGGCAAAAGAAGATGACACAG...TTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAATGTTGACACACAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CAA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCCTGTGTCATCTTCTTTaGCCAGGAGAAATCTGCTTC +
Preference number: 5 (lower is better)
Translates to: FQMKSNPQALCVNILVNLLCHLL*PGEICF
Trigger: GAAGCAGATTTCTCCTGGCAAAAGAAGATGACACAG...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GCCTTGTGTGTCAACATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAAGCGCAAAAATGCCTCTaGAATTTCCATCTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: ALCVNILVNLYLNERRSKAQKCL*NFHLKL
Trigger: CAGCTTGAGATGGAAATTCAAGAGGCATTTTTGCGC...TTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAATGTTGACACACAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS-3UTR CAA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATAGGCTCAAGGAGTTCTaGGCTTTCCTCAAGCATCTC +
Preference number: 5 (lower is better)
Translates to: GLKIFNINKPWDIQMALHRLKEF*AFLKHL
Trigger: GAGATGCTTGAGGAAAGCCAAGAACTCCTTGAGCCT...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGAGGTCTCTGTACCCTTaGATACCTTGGTTCAACTGC +
Preference number: 5 (lower is better)
Translates to: LVFKGQVYISQKENISPLRSLYP*IPWFNC
Trigger: GCAGTTGAACCAAGGTATCAAAGGGTACAGAGACCT...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CAA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAGTCACTCTTGGTCCTTaGTCTTCTATCATGGCTGCT +
Preference number: 5 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGVTLGP*SSIMAA
Trigger: AGCAGCCATGATAGAAGACAAAGGACCAAGAGTGAC...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCGTAGTTGAACTATTGTaGACATTGGCACAGCGACCA +
Preference number: 5 (lower is better)
Translates to: FQMKSNPQALCVNILVNLVVELL*TLAQRP
Trigger: TGGTCGCTGTGCCAATGTCAACAATAGTTCAACTAC...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGGATCTAAAGGTAGGCTaGATCTCCTCTCTAGAGCAT +
Preference number: 5 (lower is better)
Translates to: LVFKGQVYISQKENISPLDLKVG*ISSLEH
Trigger: ATGCTCTAGAGAGGAGATCAAGCCTACCTTTAGATC...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CAA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAGATCTAAAGGTAGGCTaGATCTCCTCTCTAGAGCAT +
Preference number: 5 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGDLKVG*ISSLEH
Trigger: ATGCTCTAGAGAGGAGATCAAGCCTACCTTTAGATC...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTGAGGGGGTTTGCTGCTaGAAACGCCCAGTAAAAGTT +
Preference number: 5 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIEGVCC*KRPVKV
Trigger: AACTTTTACTGGGCGTTTCAAGCAGCAAACCCCCTC...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTGAGGGGGTTTGCTGCTaGAAACGCCCAGTAAAAGTT +
Preference number: 5 (lower is better)
Translates to: LNARTYAYMSQVVFRDRIEGVCC*KRPVKV
Trigger: AACTTTTACTGGGCGTTTCAAGCAGCAAACCCCCTC...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CAA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAGAGGGGGTTTGCTGCTaGAAACGCCCAGTAAAAGTT +
Preference number: 5 (lower is better)
Translates to: IIYCPQELLQFRIHQFLREGVCC*KRPVKV
Trigger: AACTTTTACTGGGCGTTTCAAGCAGCAAACCCCCTC...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTCTGCCAAGACTTGTGTaGCTCTGGGTAAGTTCACTG +
Preference number: 5 (lower is better)
Translates to: YILSPRVTSIPYSPVLTILPRLV*LWVSSL
Trigger: CAGTGAACTTACCCAGAGCAACACAAGTCTTGGCAG...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGGCCCTTTCATGCCTCTaGGAAATGGAACTTCACCTG +
Preference number: 5 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMALSCL*EMELHL
Trigger: CAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGGC...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR CAA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTGCCCTTTCATGCCTCTaGGAAATGGAACTTCACCTG +
Preference number: 5 (lower is better)
Translates to: LNARTYAYMSQVVFRDRIALSCL*EMELHL
Trigger: CAGGTGAAGTTCCATTTCCAAGAGGCATGAAAGGGC...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CAA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGTGTCACCAGAGGTACTaGGTTTCAGGAAAAAGCTTG +
Preference number: 5 (lower is better)
Translates to: LVFKGQVYISQKENISPLCHQRY*VSGKSL
Trigger: CAAGCTTTTTCCTGAAACCAAGTACCTCTGGTGACA...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CAA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAATGTCACCAGAGGTACTaGGTTTCAGGAAAAAGCTTG +
Preference number: 5 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKCHQRY*VSGKSL
Trigger: CAAGCTTTTTCCTGAAACCAAGTACCTCTGGTGACA...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATGCTCCAAGGATTCATTaGCCAATGGAATGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: GLKIFNINKPWDIQMALHAPRIH*PMECFH
Trigger: GTGGAAGCATTCCATTGGCAAATGAATCCTTGGAGC...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGGGGAAGTCCATAAAGTaGATCAAGTCAGGTTCTGCT +
Preference number: 5 (lower is better)
Translates to: LVFKGQVYISQKENISPLGKSIK*IKSGSA
Trigger: AGCAGAACCTGACTTGATCAACTTTATGGACTTCCC...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CAA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAGGGAAGTCCATAAAGTaGATCAAGTCAGGTTCTGCT +
Preference number: 5 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKGKSIK*IKSGSA
Trigger: AGCAGAACCTGACTTGATCAACTTTATGGACTTCCC...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATGAAACAGGGGGAGGATaGGGTCTTTTTCCTAAAGGA +
Preference number: 5 (lower is better)
Translates to: GLKIFNINKPWDIQMALHETGGG*GLFPKG
Trigger: TCCTTTAGGAAAAAGACCCAATCCTCCCCCTGTTTC...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATACTCGACACTGGCACTaGGTGGAGCATCAATTTTCT +
Preference number: 5 (lower is better)
Translates to: GLKIFNINKPWDIQMALHTRHWH*VEHQFS
Trigger: AGAAAATTGATGCTCCACCAAGTGCCAGTGTCGAGT...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGATCTAATCCCCAAGCCTaGTGTGTCAACATTCTAGTG +
Preference number: 5 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGSNPQA*CVNILV
Trigger: CACTAGAATGTTGACACACAAGGCTTGGGGATTAGA...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATACTGGAAGTGGATATTaGGTTTCAGGATCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: GLKIFNINKPWDIQMALHTGSGY*VSGSQH
Trigger: GTGCTGGGATCCTGAAACCAAATATCCACTTCCAGT...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAATTTTTGCACGGCTTTTaGGGAAGTTGCTTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKFLHGF*GSCFQF
Trigger: GAACTGGAAGCAACTTCCCAAAAAGCCGTGCAAAAA...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCAGAAATCTGCTTCAATaGGAGTCATGTCAATCGCTG +
Preference number: 5 (lower is better)
Translates to: FQMKSNPQALCVNILVNLRNLLQ*ESCQSL
Trigger: CAGCGATTGACATGACTCCAATTGAAGCAGATTTCT...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAGCGCAAAAATGCCTCTaGAATTTCCATCTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKAQKCL*NFHLKL
Trigger: CAGCTTGAGATGGAAATTCAAGAGGCATTTTTGCGC...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTAAAGGGTATAGAATTTaGCATAGGCACGATCTCGAC +
Preference number: 5 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGKGYRI*HRHDLD
Trigger: GTCGAGATCGTGCCTATGCAAAATTCTATACCCTTT...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR CAA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCACTGTGTGCTCCCCATaGTTAGCATCATTAGAACTA +
Preference number: 5 (lower is better)
Translates to: FQMKSNPQALCVNILVNLTVCSP*LASLEL
Trigger: TAGTTCTAATGATGCTAACAATGGGGAGCACACAGT...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000494124.2
CDS-3UTR CAA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCAGTAGTCTGTCACTCTaGGTCCTTTGTCTTCTATCA +
Preference number: 5 (lower is better)
Translates to: FQMKSNPQALCVNILVNLSSLSL*VLCLLS
Trigger: TGATAGAAGACAAAGGACCAAGAGTGACAGACTACT...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAATTCCATAGTTCAAGTTaGCTTGGAGAGCTGATGGAG +
Preference number: 5 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKFHSSS*LGELME
Trigger: CTCCATCAGCTCTCCAAGCAAACTTGAACTATGGAA...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATACTGACCACCTGATATaGAGGAGACCTGTGACCTTT +
Preference number: 5 (lower is better)
Translates to: GLKIFNINKPWDIQMALHTDHLI*RRPVTF
Trigger: AAAGGTCACAGGTCTCCTCAATATCAGGTGGTCAGT...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602925.5
CDS GCA 90 bp ATCTGTTTTCCTCATCTTAATAAGTACATCATATGCCTGCTGAAGTaGTCTGACTTTAGGATGAGAAACTCTAACATAGGCCGGAAGACA +
Preference number: 5 (lower is better)
Translates to: ICFPHLNKYIICLLK*SDFRMRNSNIGRKT
Trigger: TGTCTTCCGGCCTATGTTAGAGTTTCTCATCCTAAAGTCAGAGCACTTCAGCAGGCATATGATGTACTTATTAAGATGAGGAAAACAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380437.8
ENST00000434457.7
ENST00000602925.5
CDS GCA 90 bp TACTACATAAAGAGGTCTCTGTACCCTTTGATACCTTGGTTCAACTaGAGAGCCTGTTTCTTCAGTTATGATCTGGTTATGTTTTGGGAA +
Preference number: 5 (lower is better)
Translates to: YYIKRSLYPLIPWFN*RACFFSYDLVMFWE
Trigger: TTCCCAAAACATAACCAGATCATAACTGAAGAAACAGGCTCTGCAGTTGAACCAAGGTATCAAAGGGTACAGAGACCTCTTTATGTAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CAA 90 bp GCCTTGTGTGTCAACATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAAGTGCTGACAAAGAAGTaGAACGTTCTTTATGAGTTC +
Preference number: 5 (lower is better)
Translates to: ALCVNILVNLYLNERRSKVLTKK*NVLYEF
Trigger: GAACTCATAAAGAACGTTCAACTTCTTTGTCAGCAC...TTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAATGTTGACACACAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CAA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAGGCTACTGTCGCTGCTaGTTTCATACCAGATTTCAG +
Preference number: 5 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRGYCRC*FHTRFQ
Trigger: CTGAAATCTGGTATGAAACAAGCAGCGACAGTAGCC...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGGGCTACTGTCGCTGCTaGTTTCATACCAGATTTCAG +
Preference number: 5 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRGYCRC*FHTRFQ
Trigger: CTGAAATCTGGTATGAAACAAGCAGCGACAGTAGCC...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GCCTTGTGTGTCAACATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAAATGGAACTTCACCTGTaGGATAATGCAGTTTTCCTA +
Preference number: 5 (lower is better)
Translates to: ALCVNILVNLYLNERRSKMELHL*DNAVFL
Trigger: TAGGAAAACTGCATTATCCAACAGGTGAAGTTCCAT...TTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAATGTTGACACACAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CAA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTAGAAGAGGCAAGAAGTaGCTTTTACAGAATGGACAA +
Preference number: 5 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGRRGKK*LLQNGQ
Trigger: TTGTCCATTCTGTAAAAGCAACTTCTTGCCTCTTCT...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR CAA 90 bp GCCTTGTGTGTCAACATTCTAGTGAATCTCTATTTAAATGAGAGGCGCTCCAAAAGAAGAGGCAAGAAGTaGCTTTTACAGAATGGACAA +
Preference number: 5 (lower is better)
Translates to: ALCVNILVNLYLNERRSKRRGKK*LLQNGQ
Trigger: TTGTCCATTCTGTAAAAGCAACTTCTTGCCTCTTCT...TTTGGAGCGCCTCTCATTTAAATAGAGATTCACTAGAATGTTGACACACAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CAA 90 bp GGTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGGTTTCAGGAAAAAGCTaGCAGAACCTCTCAAATCTT +
Preference number: 5 (lower is better)
Translates to: GGASIFCNLSRISEDRLLVSGKS*QNLSNL
Trigger: AAGATTTGAGAGGTTCTGCAAGCTTTTTCCTGAAAC...CAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CAA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCGTTTCAGGAAAAAGCTaGCAGAACCTCTCAAATCTT +
Preference number: 5 (lower is better)
Translates to: FQMKSNPQALCVNILVNLVSGKS*QNLSNL
Trigger: AAGATTTGAGAGGTTCTGCAAGCTTTTTCCTGAAAC...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGGCTCCAAGGATTCATTaGCCAATGGAATGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMAPRIH*PMECFH
Trigger: GTGGAAGCATTCCATTGGCAAATGAATCCTTGGAGC...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR CAA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTAAACTGGATACAGGTTaGTGCTCCAAGGATTCATTT +
Preference number: 5 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGKLDTG*CSKDSF
Trigger: AAATGAATCCTTGGAGCACAAACCTGTATCCAGTTT...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR CAA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATGGGAAGTCCATAAAGTaGATCAAGTCAGGTTCTGCT +
Preference number: 5 (lower is better)
Translates to: GLKIFNINKPWDIQMALHGKSIK*IKSGSA
Trigger: AGCAGAACCTGACTTGATCAACTTTATGGACTTCCC...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGATCTTTATTTCATCACTaGGTTCAACTGCAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGSLFHH*VQLQSL
Trigger: CAGGCTCTGCAGTTGAACCAAGTGATGAAATAAAGA...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAATCTTTATTTCATCACTaGGTTCAACTGCAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKSLFHH*VQLQSL
Trigger: CAGGCTCTGCAGTTGAACCAAGTGATGAAATAAAGA...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGGAAACAGGGGGAGGATaGGGTCTTTTTCCTAAAGGA +
Preference number: 5 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMETGGG*GLFPKG
Trigger: TCCTTTAGGAAAAAGACCCAATCCTCCCCCTGTTTC...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR CAA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTACTCGACACTGGCACTaGGTGGAGCATCAATTTTCT +
Preference number: 5 (lower is better)
Translates to: YILSPRVTSIPYSPVLTITRHWH*VEHQFS
Trigger: AGAAAATTGATGCTCCACCAAGTGCCAGTGTCGAGT...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGACTCGACACTGGCACTaGGTGGAGCATCAATTTTCT +
Preference number: 5 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMTRHWH*VEHQFS
Trigger: AGAAAATTGATGCTCCACCAAGTGCCAGTGTCGAGT...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR CAA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTATTTGTAACTGTACTTaGGTGACAGGTCCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGICNCT*VTGPFH
Trigger: ATGGAAAGGACCTGTCACCAAAGTACAGTTACAAAT...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR CAA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTCCCACTGTGGTGGATTaGTATAACATCTCTTCGCCA +
Preference number: 5 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIPTVVD*YNISSP
Trigger: TGGCGAAGAGATGTTATACAAATCCACCACAGTGGG...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGCCCACTGTGGTGGATTaGTATAACATCTCTTCGCCA +
Preference number: 5 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRPTVVD*YNISSP
Trigger: TGGCGAAGAGATGTTATACAAATCCACCACAGTGGG...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGACTATCACCATTCTTCTaGAGATTAGTAGCTTCGCCA +
Preference number: 5 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGLSPFF*RLVASP
Trigger: TGGCGAAGCTACTAATCTCAAGAAGAATGGTGATAG...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAGAAGTAGTTGAACTATaGTTGACATTGGCACAGCGA +
Preference number: 5 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKEVVEL*LTLAQR
Trigger: TCGCTGTGCCAATGTCAACAATAGTTCAACTACTTC...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAGATCTAAAGGTAGGCTaGATCTCCTCTCTAGAGCAT +
Preference number: 5 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRDLKVG*ISSLEH
Trigger: ATGCTCTAGAGAGGAGATCAAGCCTACCTTTAGATC...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGGTGCTGACAAAGAAGTaGAACGTTCTTTATGAGTTC +
Preference number: 5 (lower is better)
Translates to: LVFKGQVYISQKENISPLVLTKK*NVLYEF
Trigger: GAACTCATAAAGAACGTTCAACTTCTTTGTCAGCAC...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CAA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAGTGCTGACAAAGAAGTaGAACGTTCTTTATGAGTTC +
Preference number: 5 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGVLTKK*NVLYEF
Trigger: GAACTCATAAAGAACGTTCAACTTCTTTGTCAGCAC...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATTTCAGGACATCTATCTaGGGCCCTGAGAGTATATTA +
Preference number: 5 (lower is better)
Translates to: GLKIFNINKPWDIQMALHFRTSI*GPESIL
Trigger: TAATATACTCTCAGGGCCCAAGATAGATGTCCTGAA...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGATGGAACTTCACCTGTaGGATAATGCAGTTTTCCTA +
Preference number: 5 (lower is better)
Translates to: LVFKGQVYISQKENISPLMELHL*DNAVFL
Trigger: TAGGAAAACTGCATTATCCAACAGGTGAAGTTCCAT...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CAA 90 bp GTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGTATGGAACTTCACCTGTaGGATAATGCAGTTTTCCTA +
Preference number: 5 (lower is better)
Translates to: VEHQFSATFQESLKTDYCMELHL*DNAVFL
Trigger: TAGGAAAACTGCATTATCCAACAGGTGAAGTTCCAT...ACAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CAA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAACATCAAAACCTCCATaGCACAATTCTGATAGATGC +
Preference number: 5 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKTSKPP*HNSDRC
Trigger: GCATCTATCAGAATTGTGCAATGGAGGTTTTGATGT...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGTACATCAAAACCTCCATaGCACAATTCTGATAGATGC +
Preference number: 5 (lower is better)
Translates to: VEHQFSATFQESLKTDYCTSKPP*HNSDRC
Trigger: GCATCTATCAGAATTGTGCAATGGAGGTTTTGATGT...ACAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CAA 90 bp TTAGTATTTAAGGGCCAAGTGTACATTTCACAGAAAGAGAACATTTCGCCTCTGGTTTCAGGAAAAAGCTaGCAGAACCTCTCAAATCTT +
Preference number: 5 (lower is better)
Translates to: LVFKGQVYISQKENISPLVSGKS*QNLSNL
Trigger: AAGATTTGAGAGGTTCTGCAAGCTTTTTCCTGAAAC...CAGAGGCGAAATGTTCTCTTTCTGTGAAATGTACACTTGGCCCTTAAATACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CAA 90 bp TATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAGTTTCAGGAAAAAGCTaGCAGAACCTCTCAAATCTT +
Preference number: 5 (lower is better)
Translates to: YCPQELLQFRIHQFLRFGVSGKS*QNLSNL
Trigger: AAGATTTGAGAGGTTCTGCAAGCTTTTTCCTGAAAC...TCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATGTCACCAGAGGTACTaGGTTTCAGGAAAAAGCTTG +
Preference number: 5 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRCHQRY*VSGKSL
Trigger: CAAGCTTTTTCCTGAAACCAAGTACCTCTGGTGACA...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAAAAACTGGATACAGGTTaGTGCTCCAAGGATTCATTT +
Preference number: 5 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKKLDTG*CSKDSF
Trigger: AAATGAATCCTTGGAGCACAAACCTGTATCCAGTTT...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGGGGAAGTCCATAAAGTaGATCAAGTCAGGTTCTGCT +
Preference number: 5 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMGKSIK*IKSGSA
Trigger: AGCAGAACCTGACTTGATCAACTTTATGGACTTCCC...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR CAA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAGGGAAGTCCATAAAGTaGATCAAGTCAGGTTCTGCT +
Preference number: 5 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRGKSIK*IKSGSA
Trigger: AGCAGAACCTGACTTGATCAACTTTATGGACTTCCC...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TGCCAACCTAATACATTAAAGTTAGGGAAGGCAGCTGTCATCAGATTTTCAGGTTGCTGTGAAAGTAGGTaGATGGGTTTAAGAACATTA +
Preference number: 5 (lower is better)
Translates to: CQPNTLKLGKAAVIRFSGCCESR*MGLRTL
Trigger: TAATGTTCTTAAACCCATCAACCTACTTTCACAGCA...ACCTGAAAATCTGATGACAGCTGCCTTCCCTAACTTTAATGTATTAGGTTGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR CAA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGTCTAATCCCCAAGCCTaGTGTGTCAACATTCTAGTG +
Preference number: 5 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMSNPQA*CVNILV
Trigger: CACTAGAATGTTGACACACAAGGCTTGGGGATTAGA...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR CAA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCTTTGTATTGATGGATTaGGAGACCATTTTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: FQMKSNPQALCVNILVNLFVLMD*ETIFLS
Trigger: GGAGAGAAAAATGGTCTCCAAATCCATCAATACAAA...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAAGCAAGGTGCTAAAGTaGGCTCCACTTAGTGGTAAA +
Preference number: 5 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRSKVLK*APLSGK
Trigger: TTTACCACTAAGTGGAGCCAACTTTAGCACCTTGCT...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATGGGAATATATGGGCATaGCCACTGAAATGGAAAGAT +
Preference number: 5 (lower is better)
Translates to: GLKIFNINKPWDIQMALHGNIWA*PLKWKD
Trigger: ATCTTTCCATTTCAGTGGCAATGCCCATATATTCCC...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTCGGCTTTTTGGGAAGTaGCTTCCAGTTCATGTTCTT +
Preference number: 5 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIRLFGK*LPVHVL
Trigger: AAGAACATGAACTGGAAGCAACTTCCCAAAAAGCCG...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTTTTTGCACGGCTTTTaGGGAAGTTGCTTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIFLHGF*GSCFQF
Trigger: GAACTGGAAGCAACTTCCCAAAAAGCCGTGCAAAAA...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATGTGCTAAGTAGATTTTaGCACGGCTTTTTGGGAAGT +
Preference number: 5 (lower is better)
Translates to: GLKIFNINKPWDIQMALHVLSRF*HGFLGS
Trigger: ACTTCCCAAAAAGCCGTGCAAAAATCTACTTAGCAC...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTCTGTGTCATCTTCTTTaGCCAGGAGAAATCTGCTTC +
Preference number: 5 (lower is better)
Translates to: YILSPRVTSIPYSPVLTILCHLL*PGEICF
Trigger: GAAGCAGATTTCTCCTGGCAAAAGAAGATGACACAG...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATAGTAGTCTGTCACTCTaGGTCCTTTGTCTTCTATCA +
Preference number: 5 (lower is better)
Translates to: GLKIFNINKPWDIQMALHSSLSL*VLCLLS
Trigger: TGATAGAAGACAAAGGACCAAGAGTGACAGACTACT...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp TTCCAGATGAAATCTAATCCCCAAGCCTTGTGTGTCAACATTCTAGTGAATCTCGTTTCTCCAGCTGATTaGATAATAATGGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: FQMKSNPQALCVNILVNLVSPAD*IIMAMS
Trigger: AGACATTGCCATTATTATCAAATCAGCTGGAGAAAC...GAGATTCACTAGAATGTTGACACACAAGGCTTGGGGATTAGATTTCATCTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGTTCCATAGTTCAAGTTaGCTTGGAGAGCTGATGGAG +
Preference number: 5 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMFHSSS*LGELME
Trigger: CTCCATCAGCTCTCCAAGCAAACTTGAACTATGGAA...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR CAA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATCAGCCTTATATGCTATaGCATTTGAAGCAGGTACAG +
Preference number: 5 (lower is better)
Translates to: GLKIFNINKPWDIQMALHQPYML*HLKQVQ
Trigger: CTGTACCTGCTTCAAATGCAATAGCATATAAGGCTG...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATGTGCTGACAAAGAAGTaGAACGTTCTTTATGAGTTC +
Preference number: 5 (lower is better)
Translates to: GLKIFNINKPWDIQMALHVLTKK*NVLYEF
Trigger: GAACTCATAAAGAACGTTCAACTTCTTTGTCAGCAC...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTTTCAGGACATCTATCTaGGGCCCTGAGAGTATATTA +
Preference number: 5 (lower is better)
Translates to: LNARTYAYMSQVVFRDRIFRTSI*GPESIL
Trigger: TAATATACTCTCAGGGCCCAAGATAGATGTCCTGAA...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CAA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTCAGGACATCTATCTaGGGCCCTGAGAGTATATTA +
Preference number: 5 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRFRTSI*GPESIL
Trigger: TAATATACTCTCAGGGCCCAAGATAGATGTCCTGAA...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTTCAGGACATCTATCTaGGGCCCTGAGAGTATATTA +
Preference number: 5 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIFRTSI*GPESIL
Trigger: TAATATACTCTCAGGGCCCAAGATAGATGTCCTGAA...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATATGGAACTTCACCTGTaGGATAATGCAGTTTTCCTA +
Preference number: 5 (lower is better)
Translates to: GLKIFNINKPWDIQMALHMELHL*DNAVFL
Trigger: TAGGAAAACTGCATTATCCAACAGGTGAAGTTCCAT...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATCTTTATTTCATCACTaGGTTCAACTGCAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRSLFHH*VQLQSL
Trigger: CAGGCTCTGCAGTTGAACCAAGTGATGAAATAAAGA...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GTGGAGCATCAATTTTCTGCAACCTTTCAAGAATCTCTGAAGACAGACTATTGTTGCTGTGAAAGTAGGTaGATGGGTTTAAGAACATTA +
Preference number: 5 (lower is better)
Translates to: VEHQFSATFQESLKTDYCCCESR*MGLRTL
Trigger: TAATGTTCTTAAACCCATCAACCTACTTTCACAGCA...ACAATAGTCTGTCTTCAGAGATTCTTGAAAGGTTGCAGAAAATTGATGCTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380427.5
ENST00000494124.2
CDS-3UTR CAA 90 bp TGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTGGAAAATTTGTATTGATGGATTaGGAGACCATTTTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: CPQELLQFRIHQFLRFGKFVLMD*ETIFLS
Trigger: GGAGAGAAAAATGGTCTCCAAATCCATCAATACAAA...TTTTCCAAATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAAGAAATCTGCTTCAATaGGAGTCATGTCAATCGCTG +
Preference number: 5 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRRNLLQ*ESCQSL
Trigger: CAGCGATTGACATGACTCCAATTGAAGCAGATTTCT...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATATTTGTAACTGTACTTaGGTGACAGGTCCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: GLKIFNINKPWDIQMALHICNCT*VTGPFH
Trigger: ATGGAAAGGACCTGTCACCAAAGTACAGTTACAAAT...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTCTATCACCATTCTTCTaGAGATTAGTAGCTTCGCCA +
Preference number: 5 (lower is better)
Translates to: YILSPRVTSIPYSPVLTILSPFF*RLVASP
Trigger: TGGCGAAGCTACTAATCTCAAGAAGAATGGTGATAG...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTTTGTCAAATGCCTCTTaGTCTTTTCATGCCTGGCTT +
Preference number: 5 (lower is better)
Translates to: YILSPRVTSIPYSPVLTILSNAS*SFHAWL
Trigger: AAGCCAGGCATGAAAAGACAAAGAGGCATTTGACAA...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380427.5
CDS-3UTR CAA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAGAAGTAGTTGAACTATaGTTGACATTGGCACAGCGA +
Preference number: 5 (lower is better)
Translates to: IIYCPQELLQFRIHQFLREVVEL*LTLAQR
Trigger: TCGCTGTGCCAATGTCAACAATAGTTCAACTACTTC...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGACAGCCTTATATGCTATaGCATTTGAAGCAGGTACAG +
Preference number: 5 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRQPYML*HLKQVQ
Trigger: CTGTACCTGCTTCAAATGCAATAGCATATAAGGCTG...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp TATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATTGTGCTGACAAAGAAGTaGAACGTTCTTTATGAGTTC +
Preference number: 5 (lower is better)
Translates to: YILSPRVTSIPYSPVLTIVLTKK*NVLYEF
Trigger: GAACTCATAAAGAACGTTCAACTTCTTTGTCAGCAC...AATCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGGTGCTGACAAAGAAGTaGAACGTTCTTTATGAGTTC +
Preference number: 5 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRVLTKK*NVLYEF
Trigger: GAACTCATAAAGAACGTTCAACTTCTTTGTCAGCAC...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGATGGAACTTCACCTGTaGGATAATGCAGTTTTCCTA +
Preference number: 5 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMMELHL*DNAVFL
Trigger: TAGGAAAACTGCATTATCCAACAGGTGAAGTTCCAT...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR CAA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGATGGAACTTCACCTGTaGGATAATGCAGTTTTCCTA +
Preference number: 5 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRMELHL*DNAVFL
Trigger: TAGGAAAACTGCATTATCCAACAGGTGAAGTTCCAT...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTACATCAAAACCTCCATaGCACAATTCTGATAGATGC +
Preference number: 5 (lower is better)
Translates to: LNARTYAYMSQVVFRDRITSKPP*HNSDRC
Trigger: GCATCTATCAGAATTGTGCAATGGAGGTTTTGATGT...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CAA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAACATCAAAACCTCCATaGCACAATTCTGATAGATGC +
Preference number: 5 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRTSKPP*HNSDRC
Trigger: GCATCTATCAGAATTGTGCAATGGAGGTTTTGATGT...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGACATCAAAACCTCCATaGCACAATTCTGATAGATGC +
Preference number: 5 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRTSKPP*HNSDRC
Trigger: GCATCTATCAGAATTGTGCAATGGAGGTTTTGATGT...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTAGAAGAGGCAAGAAGTaGCTTTTACAGAATGGACAA +
Preference number: 5 (lower is better)
Translates to: LNARTYAYMSQVVFRDRIRRGKK*LLQNGQ
Trigger: TTGTCCATTCTGTAAAAGCAACTTCTTGCCTCTTCT...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CAA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGAGAAGAGGCAAGAAGTaGCTTTTACAGAATGGACAA +
Preference number: 5 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMRRGKK*LLQNGQ
Trigger: TTGTCCATTCTGTAAAAGCAACTTCTTGCCTCTTCT...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361024.6
ENST00000434457.7
CDS-3UTR CAA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGAGAAGAGGCAAGAAGTaGCTTTTACAGAATGGACAA +
Preference number: 5 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRRRGKK*LLQNGQ
Trigger: TTGTCCATTCTGTAAAAGCAACTTCTTGCCTCTTCT...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGGTTTCAGGAAAAAGCTaGCAGAACCTCTCAAATCTT +
Preference number: 5 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRVSGKS*QNLSNL
Trigger: AAGATTTGAGAGGTTCTGCAAGCTTTTTCCTGAAAC...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TTAAATGCCAGAACTTATGCCTATATGAGTCAGGTTGTCTTTAGAGACAGAATTAAACTGGATACAGGTTaGTGCTCCAAGGATTCATTT +
Preference number: 5 (lower is better)
Translates to: LNARTYAYMSQVVFRDRIKLDTG*CSKDSF
Trigger: AAATGAATCCTTGGAGCACAAACCTGTATCCAGTTT...AATTCTGTCTCTAAAGACAACCTGACTCATATAGGCATAAGTTCTGGCATTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS-3UTR CAA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGAAACTGGATACAGGTTaGTGCTCCAAGGATTCATTT +
Preference number: 5 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRKLDTG*CSKDSF
Trigger: AAATGAATCCTTGGAGCACAAACCTGTATCCAGTTT...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAAAACTGGATACAGGTTaGTGCTCCAAGGATTCATTT +
Preference number: 5 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRKLDTG*CSKDSF
Trigger: AAATGAATCCTTGGAGCACAAACCTGTATCCAGTTT...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GGGTTGAAAATCTTCAATATTAATAAGCCCTGGGACATTCAAATGGCACTTCATTTTGTATTGATGGATTaGGAGACCATTTTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: GLKIFNINKPWDIQMALHFVLMD*ETIFLS
Trigger: GGAGAGAAAAATGGTCTCCAAATCCATCAATACAAA...ATGAAGTGCCATTTGAATGTCCCAGGGCTTATTAATATTGAAGATTTTCAACCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp GTCATTTATTTAATAGTCAATGAGACCCCTTTCAGAAAACCGTATTGCAACATGCAAAGCTATGGGTTCTaGCAATATGAAGTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: VIYLIVNETPFRKPYCNMQSYGF*QYEVEK
Trigger: CTTCTCTACTTCATATTGCAAGAACCCATAGCTTTG...CATGTTGCAATACGGTTTTCTGAAAGGGGTCTCATTGACTATTAAATAAATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434457.7
CDS-3UTR CAA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGACAAAGCTATGGGTTCTaGCAATATGAAGTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRQSYGF*QYEVEK
Trigger: CTTCTCTACTTCATATTGCAAGAACCCATAGCTTTG...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGCAAAGCTATGGGTTCTaGCAATATGAAGTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRQSYGF*QYEVEK
Trigger: CTTCTCTACTTCATATTGCAAGAACCCATAGCTTTG...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGTGCTGTGAAAGTAGGTaGATGGGTTTAAGAACATTA +
Preference number: 5 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRCCESR*MGLRTL
Trigger: TAATGTTCTTAAACCCATCAACCTACTTTCACAGCA...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGATGCTGTGAAAGTAGGTaGATGGGTTTAAGAACATTA +
Preference number: 5 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRCCESR*MGLRTL
Trigger: TAATGTTCTTAAACCCATCAACCTACTTTCACAGCA...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361024.6
ENST00000380427.5
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS-3UTR CAA 90 bp ATTATATATTGTCCCCAAGAGTTACTTCAATTCCGTATTCACCAGTTCTTACGAGTTTCTCCAGCTGATTaGATAATAATGGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: IIYCPQELLQFRIHQFLRVSPAD*IIMAMS
Trigger: AGACATTGCCATTATTATCAAATCAGCTGGAGAAAC...TCGTAAGAACTGGTGAATACGGAATTGAAGTAACTCTTGGGGACAATATATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS-3UTR CAA 90 bp TTCTATCAAACTACTACAAATACTGAAGAATCCCAAAGTAGTTTTCCACAGAGGTATATGCTATTGCATTaGAAGCAGGTACAGACTTCT +
Preference number: 5 (lower is better)
Translates to: FYQTTTNTEESQSSFPQRYMLLH*KQVQTS
Trigger: AGAAGTCTGTACCTGCTTCAAATGCAATAGCATATA...CCTCTGTGGAAAACTACTTTGGGATTCTTCAGTATTTGTAGTAGTTTGATAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS GCA 72 bp GTCTGTCACTCTTGGTCCTTTGTCTTCTATCATGGCTaGTACTGTATTTTCTGCTGCCTGCTCCTCTGTCAG +
Preference number: 6 (lower is better)
Translates to: VCHSWSFVFYHG*YCIFCCLLLCQ
Trigger: CTGACAGAGGAGCAGGCAGCAGAAAATACAGTAGCAGCCATGATAGAAGACAAAGGACCAAGAGTGACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000602708.1
ENST00000602925.5
CDS CCA 72 bp AGCTACAACAGCTTCAGCTACCCCAGTCAAGACAGCTaGCCTAAGAGAATGCAGCAGAATTTTACTCTCAAG +
Preference number: 6 (lower is better)
Translates to: SYNSFSYPSQDS*PKRMQQNFTLK
Trigger: CTTGAGAGTAAAATTCTGCTGCATTCTCTTAGGCCAGCTGTCTTGACTGGGGTAGCTGAAGCTGTTGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380437.8
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS TCA 72 bp TTTCAGACTTCCATAGTTCAAGTTTGCTTGGAGAGCTaGTGGAGTGGCTTCTACACAGGTGTAACCTTCAGG +
Preference number: 6 (lower is better)
Translates to: FQTSIVQVCLES*WSGFYTGVTFR
Trigger: CCTGAAGGTTACACCTGTGTAGAAGCCACTCCATCAGCTCTCCAAGCAAACTTGAACTATGGAAGTCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000602708.1
ENST00000602925.5
CDS GCA 72 bp CATGTATTACCTGATATTGAGGAGACCTGTGACCTTTaGACAGTCTTTTTAAGCGGCTGCCTAAACTGTGCC +
Preference number: 6 (lower is better)
Translates to: HVLPDIEETCDL*TVFLSGCLNCA
Trigger: GGCACAGTTTAGGCAGCCGCTTAAAAAGACTGTGCAAAGGTCACAGGTCTCCTCAATATCAGGTAATACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380437.8
CDS CAA 72 bp AAAGTTCTGGGCTTTTCAGACTTCCATAGTTCAAGTTaGCTTGGAGAGCTGATGGAGTGGCTTCTACACAGG +
Preference number: 6 (lower is better)
Translates to: KVLGFSDFHSSS*LGELMEWLLHR
Trigger: CCTGTGTAGAAGCCACTCCATCAGCTCTCCAAGCAAACTTGAACTATGGAAGTCTGAAAAGCCCAGAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000602708.1
ENST00000602925.5
CDS CAA 90 bp AACAGAGGAAAAGTTCTGGGCTTTTCAGACTTCCATAGTTCAAGTTaGCTTGGAGAGCTGATGGAGTGGCTTCTACACAGGTGTAACCTT +
Preference number: 6 (lower is better)
Translates to: NRGKVLGFSDFHSSS*LGELMEWLLHRCNL
Trigger: AAGGTTACACCTGTGTAGAAGCCACTCCATCAGCTCTCCAAGCAAACTTGAACTATGGAAGTCTGAAAAGCCCAGAACTTTTCCTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000602708.1
ENST00000602925.5
CDS CCA 72 bp GATATCAGTTACAGCCAAGGAATTCTGGGGTCGAACTaGAGGAGCCCTTCGATAAGTGATAAAGATTCTTTG +
Preference number: 6 (lower is better)
Translates to: DISYSQGILGSN*RSPSISDKDSL
Trigger: CAAAGAATCTTTATCACTTATCGAAGGGCTCCTCCAGTTCGACCCCAGAATTCCTTGGCTGTAACTGATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602925.5
CDS TCA 72 bp GAAAGAGGACAAAGGGGAATATATGGGCATTGCCACTaGAATGGAAAGATCATAGCTACAACAGCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: ERGQRGIYGHCH*NGKIIATTASA
Trigger: AGCTGAAGCTGTTGTAGCTATGATCTTTCCATTTCAGTGGCAATGCCCATATATTCCCCTTTGTCCTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380437.8
ENST00000434457.7
ENST00000494124.2
ENST00000602925.5
CDS TCA 72 bp CTCACCGTGTCCCCATCACTTCCACCTGTGACATTTTaGAGAGCTAAAGATAAGGACAATAGCAGTTCAATA +
Preference number: 6 (lower is better)
Translates to: LTVSPSLPPVTF*RAKDKDNSSSI
Trigger: TATTGAACTGCTATTGTCCTTATCTTTAGCTCTTCAAAATGTCACAGGTGGAAGTGATGGGGACACGGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380437.8
ENST00000602442.1
CDS CAA 72 bp ATCATCCTTTATAAGTTCATCCTTAGACCCGTATCCTaGGTCAGACTGACCACCTGTGCTAGAGTGATTATC +
Preference number: 6 (lower is better)
Translates to: IILYKFILRPVS*VRLTTCARVII
Trigger: GATAATCACTCTAGCACAGGTGGTCAGTCTGACCAAGGATACGGGTCTAAGGATGAACTTATAAAGGATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434457.7
ENST00000602442.1
CDS CCA 72 bp GTAACAATGACTAAACAGACACTTGGCCCACTGTGGTaGATTTGTATAACATCTCTTCGCCAATTTATGAGC +
Preference number: 6 (lower is better)
Translates to: VTMTKQTLGPLW*ICITSLRQFMS
Trigger: GCTCATAAATTGGCGAAGAGATGTTATACAAATCCACCACAGTGGGCCAAGTGTCTGTTTAGTCATTGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380437.8
ENST00000434457.7
ENST00000602925.5
CDS CAA 90 bp CAAGGGTACCCCATTTATTACTACATAAAGAGGTCTCTGTACCCTTaGATACCTTGGTTCAACTGCAGAGCCTGTTTCTTCAGTTATGAT +
Preference number: 6 (lower is better)
Translates to: QGYPIYYYIKRSLYP*IPWFNCRACFFSYD
Trigger: ATCATAACTGAAGAAACAGGCTCTGCAGTTGAACCAAGGTATCAAAGGGTACAGAGACCTCTTTATGTAGTAATAAATGGGGTACCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS TCA 72 bp TACACAGGTGTAACCTTCAGGTACTGTTTCTCCAGCTaGTTTGATAATAATGGCAATGTCTGTAATTGGAGC +
Preference number: 6 (lower is better)
Translates to: YTGVTFRYCFSS*FDNNGNVCNWS
Trigger: GCTCCAATTACAGACATTGCCATTATTATCAAATCAGCTGGAGAAACAGTACCTGAAGGTTACACCTGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434457.7
ENST00000602708.1
ENST00000602925.5
CDS GCA 72 bp CCTCATCTTAATAAGTACATCATATGCCTGCTGAAGTaGTCTGACTTTAGGATGAGAAACTCTAACATAGGC +
Preference number: 6 (lower is better)
Translates to: PHLNKYIICLLK*SDFRMRNSNIG
Trigger: GCCTATGTTAGAGTTTCTCATCCTAAAGTCAGAGCACTTCAGCAGGCATATGATGTACTTATTAAGATGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380437.8
ENST00000434457.7
ENST00000602925.5
CDS CCA 72 bp TTTTATTTCCTGTTTAGTTCTCTTAGCCATGAGAGGTaGACTCTTTGTAATGCTATTCCCAGTAGGGTGTCT +
Preference number: 6 (lower is better)
Translates to: FYFLFSSLSHER*TLCNAIPSRVS
Trigger: AGACACCCTACTGGGAATAGCATTACAAAGAGTCCACCTCTCATGGCTAAGAGAACTAAACAGGAAATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380437.8
ENST00000434457.7
ENST00000602925.5
CDS CCA 72 bp TACTACATAAAGAGGTCTCTGTACCCTTTGATACCTTaGTTCAACTGCAGAGCCTGTTTCTTCAGTTATGAT +
Preference number: 6 (lower is better)
Translates to: YYIKRSLYPLIP*FNCRACFFSYD
Trigger: ATCATAACTGAAGAAACAGGCTCTGCAGTTGAACCAAGGTATCAAAGGGTACAGAGACCTCTTTATGTAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380424.1
CDS CCA 72 bp AGAAAAGAAGTCACCATACCCAATATCTGTAAGCGGTaGTTTATCTCTCCCTCTCTTATAACAGAGGAAAAG +
Preference number: 6 (lower is better)
Translates to: RKEVTIPNICKR*FISPSLITEEK
Trigger: CTTTTCCTCTGTTATAAGAGAGGGAGAGATAAACCACCGCTTACAGATATTGGGTATGGTGACTTCTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602708.1
CDS GCA 72 bp CTGCTGAATCAAAATCAACCTTATCTGTTTTCTCTGTaGCTTTATCAGGAAACAACCTGTCGGTCAAACAAT +
Preference number: 6 (lower is better)
Translates to: LLNQNQPYLFSL*LYQETTCRSNN
Trigger: ATTGTTTGACCGACAGGTTGTTTCCTGATAAAGGCACAGAGAAAACAGATAAGGTTGATTTTGATTCAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494124.2
CDS CAA 72 bp TCTGAAGACAGACTATTGTATGCAATTCCATATTCATaGTCAAATGCCTCTTTGTCTTTTCATGCCTGGCTT +
Preference number: 6 (lower is better)
Translates to: SEDRLLYAIPYS*SNASLSFHAWL
Trigger: AAGCCAGGCATGAAAAGACAAAGAGGCATTTGACAATGAATATGGAATTGCATACAATAGTCTGTCTTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380427.5