RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DENND2A (Homo sapiens)

Ensembl gene IDs: ENSG00000146966

Ensembl transcript IDs: ENST00000275884.10, ENST00000461883.5, ENST00000475837.1, ENST00000477488.1, ENST00000489552.1, ENST00000491728.5, ENST00000492720.5, ENST00000496613.6, ENST00000537639.5

Found 690 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTaGGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAG +
Preference number: 1 (lower is better)
Translates to: THLHVGDTPGLGLPF*GCPPRRLPGPHPGK
Trigger: CTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
3UTR CCA 90 bp AAACCCAACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTaGTCTCGGGCTCCCTTTCTGGGGCTGTCCTCCCAGGCGGCTCCC +
Preference number: 1 (lower is better)
Translates to: KPNHQNNPFACRRHA*SRAPFLGLSSQAAP
Trigger: GGGAGCCGCCTGGGAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTTGGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275884.10
ENST00000496613.6
ENST00000537639.5
3UTR GCA 90 bp TTCATTTTATTGCCTAGTCCCTTCAGGAACTTATTGACACCGCTGTaGTCTCCACTGGGGAGTGTTTCCAGATACTCTTGGGCTCGGACC +
Preference number: 1 (lower is better)
Translates to: FILLPSPFRNLLTPL*SPLGSVSRYSWART
Trigger: GGTCCGAGCCCAAGAGTATCTGGAAACACTCCCCAGTGGAGAGCACAGCGGTGTCAATAAGTTCCTGAAGGGACTAGGCAATAAAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461883.5
3UTR-3UTR CCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCTGTCGGCGACACGCCTaGTCTCGGGCTCCCTTTCTG +
Preference number: 2 (lower is better)
Translates to: CPPRRLPGPHPGKSPASACRRHA*SRAPFL
Trigger: CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACA...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
3UTR-3UTR CCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCCGCACCGTGACAACCTaGGACCCAGCCTTTCAGAAA +
Preference number: 2 (lower is better)
Translates to: CPPRRLPGPHPGKSPASARTVTT*DPAFQK
Trigger: TTTCTGAAAGGCTGGGTCCCAGGTTGTCACGGTGCG...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
3UTR-3UTR TCA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTCCAGTTCCGCACCGTaGCAACCTGGGACCCAGCCT +
Preference number: 2 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPSSSAP*QPGTQP
Trigger: AGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGA...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
3UTR-3UTR GCA 90 bp CAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGCGGAAGGCCTCCCGCTaGAGGGTTCTCTCCTCACGC +
Preference number: 2 (lower is better)
Translates to: QNNPFACRRHAWSRAPFLRKASR*RVLSSR
Trigger: GCGTGAGGAGAGAACCCTGCAGCGGGAGGCCTTCCG...CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
3UTR-3UTR CCA 90 bp ACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTAGTGGCGGAGGCTCTTaGAGGAGACAGCTTTGCGGA +
Preference number: 2 (lower is better)
Translates to: THLHVGDTPGLGLPFWGCSGGGS*RRQLCG
Trigger: TCCGCAAAGCTGTCTCCTCCAAGAGCCTCCGCCACT...ACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
3UTR-3UTR TCA 90 bp ACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTCCAGTTCCGCACCGTaGCAACCTGGGACCCAGCCT +
Preference number: 2 (lower is better)
Translates to: TKTTHLHVGDTPGLGLPFSSSAP*QPGTQP
Trigger: AGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGA...GAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
3UTR-3UTR TCA 90 bp CAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGTCCAGTTCCGCACCGTaGCAACCTGGGACCCAGCCT +
Preference number: 2 (lower is better)
Translates to: QNNPFACRRHAWSRAPFLSSSAP*QPGTQP
Trigger: AGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGA...CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
3UTR-3UTR CCA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGTGTCGGCGACACGCCTaGTCTCGGGCTCCCTTTCTG +
Preference number: 2 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWCRRHA*SRAPFL
Trigger: CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACA...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
3UTR-3UTR CCA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGCGCAGCTCCCGCTCCTaGATGAAGCCCCGAAACATC +
Preference number: 2 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWRSSRS*MKPRNI
Trigger: GATGTTTCGGGGCTTCATCCAGGAGCGGGAGCTGCG...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461883.5
3UTR CAA 90 bp ATTGACACCGCTGTGCTCTCCACTGGGGAGTGTTTCCAGATACTCTaGGGCTCGGACCTCAAACAGACCTTTGGCATCCTGCCGGCGCAG +
Preference number: 2 (lower is better)
Translates to: IDTAVLSTGECFQIL*GSDLKQTFGILPAQ
Trigger: CTGCGCCGGCAGGATGCCAAAGGTCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAACACTCCCCAGTGGAGAGCACAGCGGTGTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
3UTR-3UTR CCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTCGCACCGTGACAACCTaGGACCCAGCCTTTCAGAAA +
Preference number: 2 (lower is better)
Translates to: PPKQPICMSATRLVSGSLRTVTT*DPAFQK
Trigger: TTTCTGAAAGGCTGGGTCCCAGGTTGTCACGGTGCG...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
3UTR-3UTR CCA 90 bp GTGTTTCCAGATACTCTTGGGCTCGGACCTCAAACAGACCTTTGGCATCCTGCCCCTCGTTCAAGGGGCTaGACTCTGGACCGTGCCTGC +
Preference number: 2 (lower is better)
Translates to: VFPDTLGLGPQTDLWHPAPRSRG*TLDRAC
Trigger: GCAGGCACGGTCCAGAGTCCAGCCCCTTGAACGAGG...GGCAGGATGCCAAAGGTCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461883.5
3UTR-3UTR GCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGCCAAAACAACCCATTTaGATGTCGGCGACACGCCTG +
Preference number: 2 (lower is better)
Translates to: KQPICMSATRLVSGSLSGPKQPI*MSATRL
Trigger: CAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGG...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
3UTR-3UTR CCA 90 bp CACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCGCACCGTGACAACCTaGGACCCAGCCTTTCAGAAA +
Preference number: 2 (lower is better)
Translates to: HQNNPFACRRHAWSRAPFRTVTT*DPAFQK
Trigger: TTTCTGAAAGGCTGGGTCCCAGGTTGTCACGGTGCG...AAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
3UTR-3UTR CCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATCCATGTTGCACAGGCTaGCCTCGAACTCCTGGTCTC +
Preference number: 2 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHPCCTG*PRTPGL
Trigger: GAGACCAGGAGTTCGAGGCCAGCCTGTGCAACATGG...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
3UTR-3UTR CCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATATGAGCCACCGTGCCTaGCCATCCTTTATTTGTGGG +
Preference number: 2 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHMSHRA*PSFICG
Trigger: CCCACAAATAAAGGATGGCCAGGCACGGTGGCTCAT...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
3UTR-3UTR TCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATATCTTTAGTAGAGACTaGGTTTCATCATGTTGGCCA +
Preference number: 2 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHIFSRD*VSSCWP
Trigger: TGGCCAACATGATGAAACTCAGTCTCTACTAAAGAT...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
3UTR CAA 90 bp GGCTGCACTAGGAGGAAGTTTTCCCTTGAGGCTGAGAGTTATTTCTaGTGGAGAAATTTCATTTTATTGCCTAGTCCCTTCAGGAACTTA +
Preference number: 2 (lower is better)
Translates to: GCTRRKFSLEAESYF*WRNFILLPSPFRNL
Trigger: TAAGTTCCTGAAGGGACTAGGCAATAAAATGAAATTTCTCCACAAGAAATAACTCTCAGCCTCAAGGGAAAACTTCCTCCTAGTGCAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461883.5
3UTR CCA 72 bp CATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTaGGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCAT +
Preference number: 3 (lower is better)
Translates to: HVGDTPGLGLPF*GCPPRRLPGPH
Trigger: ATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
3UTR GCA 72 bp CCAGGAAGTGGCGGAGGCTCTTGGAGGAGACAGCTTTaGGGAAGGCCTCCCGCTGCAGGGTTCTCTCCTCAC +
Preference number: 3 (lower is better)
Translates to: PGSGGGSWRRQL*GRPPAAGFSPH
Trigger: GTGAGGAGAGAACCCTGCAGCGGGAGGCCTTCCGCAAAGCTGTCTCCTCCAAGAGCCTCCGCCACTTCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461883.5
3UTR CCA 72 bp AGCCACCGCGGCCTCCAGTTCCGCACCGTGACAACCTaGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTG +
Preference number: 3 (lower is better)
Translates to: SHRGLQFRTVTT*DPAFQKGHQEL
Trigger: CAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGAGGCCGCGGTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
3UTR-3UTR CAA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTAAGTGGCGGAGGCTCTaGGAGGAGACAGCTTTGCGG +
Preference number: 3 (lower is better)
Translates to: PPKQPICMSATRLVSGSLKWRRL*EETALR
Trigger: CCGCAAAGCTGTCTCCTCCAAGAGCCTCCGCCACTT...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
3UTR CCA 72 bp CTGTGCTCTCCACTGGGGAGTGTTTCCAGATACTCTTaGGCTCGGACCTCAAACAGACCTTTGGCATCCTGC +
Preference number: 3 (lower is better)
Translates to: LCSPLGSVSRYS*ARTSNRPLASC
Trigger: GCAGGATGCCAAAGGTCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAACACTCCCCAGTGGAGAGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
3UTR-3UTR CAA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATCGGAGTTTCACCATGTaGCACAGGCTGGCCTCGAAC +
Preference number: 3 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHRSFTM*HRLASN
Trigger: GTTCGAGGCCAGCCTGTGCAACATGGTGAAACTCCG...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
3UTR GCA 72 bp TTGCCTAGTCCCTTCAGGAACTTATTGACACCGCTGTaGTCTCCACTGGGGAGTGTTTCCAGATACTCTTGG +
Preference number: 3 (lower is better)
Translates to: LPSPFRNLLTPL*SPLGSVSRYSW
Trigger: CCAAGAGTATCTGGAAACACTCCCCAGTGGAGAGCACAGCGGTGTCAATAAGTTCCTGAAGGGACTAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR TCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCCCAGCGGCAGCTCCCTaGGCAGTGGCAGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASAPAAAP*AVAASW
Trigger: CCAGCTCGCTGCCACTGCTCAGGGAGCTGCCGCTGG...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCCCAGCGGCAGCTCCCTaGGCAGTGGCAGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PRRLPGPHPGKSPASARSPAAAP*AVAASW
Trigger: CCAGCTCGCTGCCACTGCTCAGGGAGCTGCCGCTGG...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCCAGGGGTGGGCTCCCTaGCTTCCAGGTCCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLQGWAP*LPGPRG
Trigger: ACCCCTCGGACCTGGAAGGCAGGGAGCCCACCCCTG...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCGGTGGACCCTCTGGCTaGCTTCTGAGCCACTCCCGC +
Preference number: 4 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGGGPSG*LLSHSR
Trigger: GCGGGAGTGGCTCAGAAGTCAGCCAGAGGGTCCACC...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCGAGTTCCCGGGCAAGTaGTGGGTACCGAGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGEFPGK*WVPRRL
Trigger: CAGGCGCCTCGGTACCCATCACTTGCCCGGGAACTC...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCGGGTACCGAGGCGCCTaGTTCAGCCGGGACTTCACG +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASAGYRGA*FSRDFT
Trigger: CGTGAAGTCCCGGCTGAAGCAGGCGCCTCGGTACCC...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCCTGGACTCTGGACCGTaGCTGCCGTCTAGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASALDSGP*LPSRGP
Trigger: AGGGCCCCTAGACGGCAGGCACGGTCCAGAGTCCAG...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp GGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGCGGAAGGCCTCCCGCTaGAGGGTTCTCTCCTCACGC +
Preference number: 4 (lower is better)
Translates to: GCPPRRLPGPHPGKSPASRKASR*RVLSSR
Trigger: GCGTGAGGAGAGAACCCTGCAGCGGGAGGCCTTCCG...CGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCAGACCTTTGGCATCCTaGCGGCGCAGCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGRPLAS*RRSSRS
Trigger: GGAGCGGGAGCTGCGCCGGCAGGATGCCAAAGGTCT...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCGGCTGTGGCTGCCCTTaGCCGGCCTGCACACTGTCA +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASAGCGCP*PACTLS
Trigger: TGACAGTGTGCAGGCCGGCCAAGGGCAGCCACAGCC...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496613.6
CDS-3UTR TCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCTGTTCCAGGGCCACCTaGAGCTTCCGGGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLCSRAT*SFRGRM
Trigger: CATCCTGCCCCGGAAGCTTCAGGTGGCCCTGGAACA...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCACTCTGGACCGTGCCTaGCGTCTAGGGGCCCTTCGT +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASATLDRA*RLGALR
Trigger: ACGAAGGGCCCCTAGACGGCAGGCACGGTCCAGAGT...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCCCACAAGCTCAGGGGTaGGCTCCCTGCCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLPQAQG*APCLPG
Trigger: ACCTGGAAGGCAGGGAGCCCACCCCTGAGCTTGTGG...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCCTGTTGGGTGAGTTCTaGCACGTAGGCAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASALLGEF*HVGSPG
Trigger: GCCGGGGCTGCCTACGTGCCAGAACTCACCCAACAG...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGTCGACCATGGCGGGTaGCAGCACCGGGATGTAGGT +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLVDHGG*QHRDVG
Trigger: ACCTACATCCCGGTGCTGCCACCCGCCATGGTCGAC...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCACACGATGTCGACCATaGCGGGTGGCAGCACCGGGA +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLTRCRP*RVAAPG
Trigger: TCCCGGTGCTGCCACCCGCCATGGTCGACATCGTGT...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCTGTCGGCGACACGCCTaGTCTCGGGCTCCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGCRRHA*SRAPFL
Trigger: CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACA...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCTGTCGGCGACACGCCTaGTCTCGGGCTCCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: PRRLPGPHPGKSPASARSCRRHA*SRAPFL
Trigger: CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACA...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGCTCCCGCTCCTGGATaGAGCCCCGAAACATCTGAG +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLAPAPG*SPETSE
Trigger: CTCAGATGTTTCGGGGCTTCATCCAGGAGCGGGAGC...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCGCTTCTTCCCAGCCCTaGTGGCTTCTGCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PRRLPGPHPGKSPASARSASSQP*WLLQLG
Trigger: ACCCAGCTGCAGAAGCCAGCAGGGCTGGGAAGAAGC...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp AAGCCACCGCGGCCTCCAGTTCCGCACCGTGACAACCTGGGACCCAGCCTTTCACAGGGGTGGGCTCCCTaGCTTCCAGGTCCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: KPPRPPVPHRDNLGPSLSQGWAP*LPGPRG
Trigger: ACCCCTCGGACCTGGAAGGCAGGGAGCCCACCCCTG...TGAAAGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGAGGCCGCGGTGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCAGCCCCAGCTTAGTCTaGGCGTACCAGTCCACCCTG +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLSPSLV*AYQSTL
Trigger: CAGGGTGGACTGGTACGCGCAGACTAAGCTGGGGCT...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGGGGCCCTTCGTCCTaGTCACAAGCCAGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASARGPSS*SQASSF
Trigger: GAACGAGCTGGCTTGTGAGCAGGACGAAGGGCCCCT...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCAGGGGCCCTTCGTCCTaGTCACAAGCCAGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: PRRLPGPHPGKSPASARSRGPSS*SQASSF
Trigger: GAACGAGCTGGCTTGTGAGCAGGACGAAGGGCCCCT...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCACTTGTGCCGGGGTCTaGCTCTGGCAGATGGGCAAG +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASATCAGV*LWQMGK
Trigger: CTTGCCCATCTGCCAGAGCCAGACCCCGGCACAAGT...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCCAAGTCCCTGGTAACTaGGGATCCAGCCCTGCCGAC +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLQVPGN*GSSPAD
Trigger: GTCGGCAGGGCTGGATCCCCAGTTACCAGGGACTTG...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp GGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGAACACACAGACCAGGTaGCGGACGCTGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GCPPRRLPGPHPGKSPASNTQTR*RTLREE
Trigger: CTCCTCCCTCAGCGTCCGCCACCTGGTCTGTGTGTT...CGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCAACACACAGACCAGGTaGCGGACGCTGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLNTQTR*RTLREE
Trigger: CTCCTCCCTCAGCGTCCGCCACCTGGTCTGTGTGTT...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp GGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGCGCAGCTCCCGCTCCTaGATGAAGCCCCGAAACATC +
Preference number: 4 (lower is better)
Translates to: GCPPRRLPGPHPGKSPASRSSRS*MKPRNI
Trigger: GATGTTTCGGGGCTTCATCCAGGAGCGGGAGCTGCG...CGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCTTTTCAGTCTGGCTGTaGCTGCCCTTGGCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: PRRLPGPHPGKSPASARSFSVWL*LPLAGL
Trigger: CAGGCCGGCCAAGGGCAGCCACAGCCAGACTGAAAA...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496613.6
CDS-3UTR TCA 90 bp AAGCCACCGCGGCCTCCAGTTCCGCACCGTGACAACCTGGGACCCAGCCTTTCACCTCTGGCTGACTTCTaGGCCACTCCCGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: KPPRPPVPHRDNLGPSLSPLADF*ATPASQ
Trigger: CTGGGAGGCGGGAGTGGCTCAGAAGTCAGCCAGAGG...TGAAAGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGAGGCCGCGGTGGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp GGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGCCAGGGCCTTCTGCATaGACCTTTCCTGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GCPPRRLPGPHPGKSPASPGPSA*TFPVLH
Trigger: GTGGAGGACAGGAAAGGTTCATGCAGAAGGCCCTGG...CGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCGAGGGAACTGTTGGGTaGGTTCTGGCACGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASAEGTVG*VLARRQ
Trigger: CTGCCTACGTGCCAGAACTCACCCAACAGTTCCCTC...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCATGTTGAGGGACTTGTaGCGGGGTCTGGCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGMLRDL*RGLALA
Trigger: TGCCAGAGCCAGACCCCGGCACAAGTCCCTCAACAT...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCCTCCAGGGGTGGGCTCCCTaGCTTCCAGGTCCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: ICMSATRLVSGSLSGAVLQGWAP*LPGPRG
Trigger: ACCCCTCGGACCTGGAAGGCAGGGAGCCCACCCCTG...GAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCGAAGGCGCTTCCCTTTaGCTCCAGGCAGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASAEGASL*LQAAVF
Trigger: GAAGACTGCTGCCTGGAGGCAAAGGGAAGCGCCTTC...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGAAGGCGCTTCCCTTTaGCTCCAGGCAGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLEGASL*LQAAVF
Trigger: GAAGACTGCTGCCTGGAGGCAAAGGGAAGCGCCTTC...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCTGCCCTTGGCCGGCCTaGACACTGTCATCATGTCAG +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLCPWPA*TLSSCQ
Trigger: CTGACATGATGACAGTGTGCAGGCCGGCCAAGGGCA...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496613.6
CDS-3UTR CCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGCGGCTCCGCGGGCTCTaGGGCGCATCTTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: KQPICMSATRLVSGSLSGRLRGL*GASWGL
Trigger: GAGCCCCCAAGATGCGCCCCAGAGCCCGCGGAGCCG...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275884.10
ENST00000496613.6
CDS-3UTR CCA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCCGGCTCCGCGGGCTCTaGGGCGCATCTTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPRLRGL*GASWGL
Trigger: GAGCCCCCAAGATGCGCCCCAGAGCCCGCGGAGCCG...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275884.10
ENST00000496613.6
CDS-3UTR CCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGCTTCCGGGGCAGGATaGAGTCCTCATCGTCCATCT +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLASGAG*SPHRPS
Trigger: AGATGGACGATGAGGACTCCATCCTGCCCCGGAAGC...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGTGGCGGAGGCTCTTaGAGGAGACAGCTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASASGGGS*RRQLCG
Trigger: TCCGCAAAGCTGTCTCCTCCAAGAGCCTCCGCCACT...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp GGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGAAGACCTCCAGGAAGTaGCGGAGGCTCTTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GCPPRRLPGPHPGKSPASKTSRK*RRLLEE
Trigger: CTCCTCCAAGAGCCTCCGCCACTTCCTGGAGGTCTT...CGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCCCTGCTCGAGTTTCTTaGCCTGCTTCAGCACGGAGA +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLPARVS*PASARR
Trigger: TCTCCGTGCTGAAGCAGGTCAAGAAACTCGAGCAGG...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCCCTGCTCGAGTTTCTTaGCCTGCTTCAGCACGGAGA +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASAPARVS*PASARR
Trigger: TCTCCGTGCTGAAGCAGGTCAAGAAACTCGAGCAGG...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp ACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTGGTGGACCCTCTGGCTaGCTTCTGAGCCACTCCCGC +
Preference number: 4 (lower is better)
Translates to: THLHVGDTPGLGLPFWGCGGPSG*LLSHSR
Trigger: GCGGGAGTGGCTCAGAAGTCAGCCAGAGGGTCCACC...ACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCTCTCCTGGTACTCGATaGGTTCCCGGGCAAGTGATG +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLSPGTR*VPGQVM
Trigger: CATCACTTGCCCGGGAACTCATCGAGTACCAGGAGA...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCCTTCTCATGAGTGGCTaGACCAGGGCAGGAGAGATG +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLLLMSG*TRAGEM
Trigger: CATCTCTCCTGCCCTGGTTCAGCCACTCATGAGAAG...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CTGCAGGGTTCTCTCCTCACGCTCGCCCGACGTCAGGAACAAAGAGTAGTGTCCCCAGCGGCAGCTCCCTaGGCAGTGGCAGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LQGSLLTLARRQEQRVVSPAAAP*AVAASW
Trigger: CCAGCTCGCTGCCACTGCTCAGGGAGCTGCCGCTGG...GGACACTACTCTTTGTTCCTGACGTCGGGCGAGCGTGAGGAGAGAACCCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR GCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGTCCCAGGGCCTTCTaGATGAACCTTTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLGPRAF*MNLSCP
Trigger: AGGACAGGAAAGGTTCATGCAGAAGGCCCTGGGACC...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCACCAGTCCACCCTGCTaGTCTCAGAGGAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLTSPPC*SQRKTA
Trigger: TGCAGTCTTCCTCTGAGAGCAGCAGGGTGGACTGGT...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCCGTACCAGTCCACCCTaGTGCTCTCAGAGGAAGACT +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASARTSPP*CSQRKT
Trigger: AGTCTTCCTCTGAGAGCAGCAGGGTGGACTGGTACG...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCGTACCAGTCCACCCTaGTGCTCTCAGAGGAAGACT +
Preference number: 4 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGRTSPP*CSQRKT
Trigger: AGTCTTCCTCTGAGAGCAGCAGGGTGGACTGGTACG...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTGGGTACCGAGGCGCCTaGTTCAGCCGGGACTTCACG +
Preference number: 4 (lower is better)
Translates to: THLHVGDTPGLGLPFWGCGYRGA*FSRDFT
Trigger: CGTGAAGTCCCGGCTGAAGCAGGCGCCTCGGTACCC...ACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCCTCCTGGACTCTGGACCGTaGCTGCCGTCTAGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: ICMSATRLVSGSLSGAVLLDSGP*LPSRGP
Trigger: AGGGCCCCTAGACGGCAGGCACGGTCCAGAGTCCAG...GAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCTGCTGGGTGCAGGAGTaGGCACCTCTTTCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASACWVQE*APLSSL
Trigger: AAGGGAAGAAAGAGGTGCCCACTCCTGCACCCAGCA...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCCGTTCTCCGGGGTTTTaGCAGAGGGTTGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASARSPGF*QRVDEG
Trigger: CCCTTCATCAACCCTCTGCCAAAACCCCGGAGAACG...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAAGAGCTGCCTCTCCTaGTACTCGATGAGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASAKSCLS*YSMSSR
Trigger: CCGGGAACTCATCGAGTACCAGGAGAGGCAGCTCTT...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AAGCCACCGCGGCCTCCAGTTCCGCACCGTGACAACCTGGGACCCAGCCTTTCACTGTTGGGTGAGTTCTaGCACGTAGGCAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: KPPRPPVPHRDNLGPSLSLLGEF*HVGSPG
Trigger: GCCGGGGCTGCCTACGTGCCAGAACTCACCCAACAG...TGAAAGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGAGGCCGCGGTGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCTTCTTGACTCTAGCGTaGGGTTGTGGAGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLFLTLA*GCGGLP
Trigger: TGGAAGGCCTCCACAACCTCACGCTAGAGTCAAGAA...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCTTCTTGACTCTAGCGTaGGGTTGTGGAGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASAFLTLA*GCGGLP
Trigger: TGGAAGGCCTCCACAACCTCACGCTAGAGTCAAGAA...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCGAGAGGGGATCGTTCTaGAAGCGTAGCTTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASAERGSF*KRSLPS
Trigger: ACTTGGCAAGCTACGCTTTCAGAACGATCCCCTCTC...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp GGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGCTTCTCCGGCATGTTTaGACGTTCTCCGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: GCPPRRLPGPHPGKSPASLLRHV*TFSGVL
Trigger: CAAAACCCCGGAGAACGTTCAAACATGCCGGAGAAG...CGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCCTTCTCCGGCATGTTTaGACGTTCTCCGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: PRRLPGPHPGKSPASARSLLRHV*TFSGVL
Trigger: CAAAACCCCGGAGAACGTTCAAACATGCCGGAGAAG...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGTGGAGAGCAGCCCGATaGGGAAGGGCGTCGGCGAGC +
Preference number: 4 (lower is better)
Translates to: KQPICMSATRLVSGSLSGWRAAR*GRASAS
Trigger: GCTCGCCGACGCCCTTCCTCATCGGGCTGCTCTCCA...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp ACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTGGAGAGCAGCCCGATaGGGAAGGGCGTCGGCGAGC +
Preference number: 4 (lower is better)
Translates to: TTKTTHLHVGDTPGLGLPWRAAR*GRASAS
Trigger: GCTCGCCGACGCCCTTCCTCATCGGGCTGCTCTCCA...AGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGCCAGCGGCAGCTCCCTaGGCAGTGGCAGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWPAAAP*AVAASW
Trigger: CCAGCTCGCTGCCACTGCTCAGGGAGCTGCCGCTGG...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCAAGCCCCGAAACATCTaGGTCTCCATGAAGACCTCC +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLKPRNI*VSMKTS
Trigger: GGAGGTCTTCATGGAGACTCAGATGTTTCGGGGCTT...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCAAGCCCCGAAACATCTaGGTCTCCATGAAGACCTCC +
Preference number: 4 (lower is better)
Translates to: PRRLPGPHPGKSPASARSKPRNI*VSMKTS
Trigger: GGAGGTCTTCATGGAGACTCAGATGTTTCGGGGCTT...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCAAGCCCCGAAACATCTaGGTCTCCATGAAGACCTCC +
Preference number: 4 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGKPRNI*VSMKTS
Trigger: GGAGGTCTTCATGGAGACTCAGATGTTTCGGGGCTT...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp ATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCCTCTCCAGTTCCGCACCGTaGCAACCTGGGACCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ICMSATRLVSGSLSGAVLSSSAP*QPGTQP
Trigger: AGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGA...GAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCTCTGAAAGCGTAGCTTaGCAAGTCTTGGCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLSESVA*QVLALG
Trigger: GCCGAGAGCCAAGACTTGGCAAGCTACGCTTTCAGA...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCTCTGAAAGCGTAGCTTaGCAAGTCTTGGCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: PRRLPGPHPGKSPASARSSESVA*QVLALG
Trigger: GCCGAGAGCCAAGACTTGGCAAGCTACGCTTTCAGA...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp GGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGTCTGAAAGCGTAGCTTaGCAAGTCTTGGCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: GCPPRRLPGPHPGKSPASSESVA*QVLALG
Trigger: GCCGAGAGCCAAGACTTGGCAAGCTACGCTTTCAGA...CGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCTCGAGTTTCTTGACCTaGTTCAGCACGGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLSSFLT*FSTERG
Trigger: TCCCCTCTCCGTGCTGAAGCAGGTCAAGAAACTCGA...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCCAAAACAACCCATTTaGATGTCGGCGACACGCCTG +
Preference number: 4 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGPKQPI*MSATRL
Trigger: CAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGG...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp GGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGCCAAAACAACCCATTTaGATGTCGGCGACACGCCTG +
Preference number: 4 (lower is better)
Translates to: GCPPRRLPGPHPGKSPASPKQPI*MSATRL
Trigger: CAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGG...CGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AAGCCACCGCGGCCTCCAGTTCCGCACCGTGACAACCTGGGACCCAGCCTTTCAACTTCCCGTTCTGGCTaGCTTAGGTCTTGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: KPPRPPVPHRDNLGPSLSTSRSG*LRSCPG
Trigger: GCCGGGGCAAGACCTAAGCCAGCCAGAACGGGAAGT...TGAAAGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGAGGCCGCGGTGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCTTGCTCTCCATTGACTaGGACAGCCTCTTCACCCGT +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLLLSID*DSLFTR
Trigger: ACGGGTGAAGAGGCTGTCCCAGTCAATGGAGAGCAA...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCGACACTTCTCATGAGTaGCTGAACCAGGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGDTSHE*LNQGRR
Trigger: TCTCCTGCCCTGGTTCAGCCACTCATGAGAAGTGTC...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AAGGCCTCCCGCTGCAGGGTTCTCTCCTCACGCTCGCCCGACGTCAGGAACAAAGTCGACCATGGCGGGTaGCAGCACCGGGATGTAGGT +
Preference number: 4 (lower is better)
Translates to: KASRCRVLSSRSPDVRNKVDHGG*QHRDVG
Trigger: ACCTACATCCCGGTGCTGCCACCCGCCATGGTCGAC...TTTGTTCCTGACGTCGGGCGAGCGTGAGGAGAGAACCCTGCAGCGGGAGGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CCA 90 bp ATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCCTCACACGATGTCGACCATaGCGGGTGGCAGCACCGGGA +
Preference number: 4 (lower is better)
Translates to: ICMSATRLVSGSLSGAVLTRCRP*RVAAPG
Trigger: TCCCGGTGCTGCCACCCGCCATGGTCGACATCGTGT...GAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AAGGCCTCCCGCTGCAGGGTTCTCTCCTCACGCTCGCCCGACGTCAGGAACAAACCTCGTTCAAGGGGCTaGACTCTGGACCGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: KASRCRVLSSRSPDVRNKPRSRG*TLDRAC
Trigger: GCAGGCACGGTCCAGAGTCCAGCCCCTTGAACGAGG...TTTGTTCCTGACGTCGGGCGAGCGTGAGGAGAGAACCCTGCAGCGGGAGGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CCA 90 bp ATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCCTCCCTCGTTCAAGGGGCTaGACTCTGGACCGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: ICMSATRLVSGSLSGAVLPRSRG*TLDRAC
Trigger: GCAGGCACGGTCCAGAGTCCAGCCCCTTGAACGAGG...GAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCTGAAGCCTGACTCCTaGTCAGTCTCTAGGAATGGA +
Preference number: 4 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGLKPDS*SVSRNG
Trigger: TCCATTCCTAGAGACTGATCAGGAGTCAGGCTTCAG...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCTTAGCCTCTGTGACCTaGGTTCTCACCCCATCACTA +
Preference number: 4 (lower is better)
Translates to: PRRLPGPHPGKSPASARSLASVT*VLTPSL
Trigger: TAGTGATGGGGTGAGAACTCAGGTCACAGAGGCTAA...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCTTAGCCTCTGTGACCTaGGTTCTCACCCCATCACTA +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASALASVT*VLTPSL
Trigger: TAGTGATGGGGTGAGAACTCAGGTCACAGAGGCTAA...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTGGTGGACCCTCTGGCTaGCTTCTGAGCCACTCCCGC +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLGGPSG*LLSHSR
Trigger: GCGGGAGTGGCTCAGAAGTCAGCCAGAGGGTCCACC...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp AAGCCACCGCGGCCTCCAGTTCCGCACCGTGACAACCTGGGACCCAGCCTTTCACCAGGGCCTTCTGCATaGACCTTTCCTGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: KPPRPPVPHRDNLGPSLSPGPSA*TFPVLH
Trigger: GTGGAGGACAGGAAAGGTTCATGCAGAAGGCCCTGG...TGAAAGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGAGGCCGCGGTGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCACAATGACTGCTTGGTaGGTGTGTCAGGGATGGAAG +
Preference number: 4 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGTMTAW*VCQGWK
Trigger: CTTCCATCCCTGACACACTCACCAAGCAGTCATTGT...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCACAATGACTGCTTGGTaGGTGTGTCAGGGATGGAAG +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLTMTAW*VCQGWK
Trigger: CTTCCATCCCTGACACACTCACCAAGCAGTCATTGT...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCAGCAGGTTTGGACAATaGCTGCTTGGTGAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: PRRLPGPHPGKSPASARSSRFGQ*LLGECV
Trigger: GACACACTCACCAAGCAGTCATTGTCCAAACCTGCT...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp AAGGCCTCCCGCTGCAGGGTTCTCTCCTCACGCTCGCCCGACGTCAGGAACAAAGAGTGGAGGGAGGGCTaGTTTTGGAAGGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: KASRCRVLSSRSPDVRNKEWREG*FWKGTQ
Trigger: CTGGGTCCCCTTCCAAAATCAGCCCTCCCTCCACTC...TTTGTTCCTGACGTCGGGCGAGCGTGAGGAGAGAACCCTGCAGCGGGAGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR TCA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCCTCATAAATGGCGTTaGTTCGCAACACCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGPHKWR*FATPAW
Trigger: CCAAGCTGGTGTTGCGAATCAACGCCATTTATGAGG...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCAGAATGTTTCACTGGTaGACTGCTGGACAGGAACCC +
Preference number: 4 (lower is better)
Translates to: PRRLPGPHPGKSPASARSRMFHW*TAGQEP
Trigger: GGGTTCCTGTCCAGCAGTTCACCAGTGAAACATTCT...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCGATCACCTCAGTTCCTaGACCTGGCAGGAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGDHLSS*TWQEVL
Trigger: AAGAACTTCCTGCCAGGTTCAGGAACTGAGGTGATC...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGTGGAGAGCAGCCCGATaGGGAAGGGCGTCGGCGAGC +
Preference number: 4 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWWRAAR*GRASAS
Trigger: GCTCGCCGACGCCCTTCCTCATCGGGCTGCTCTCCA...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTGCTTCTTCCCAGCCCTaGTGGCTTCTGCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: THLHVGDTPGLGLPFWGCASSQP*WLLQLG
Trigger: ACCCAGCTGCAGAAGCCAGCAGGGCTGGGAAGAAGC...ACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCTCCCCCGACGTTCACTaGTCCTTTATTCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASASPDVH*SFIPLL
Trigger: AAGGAGAGGAATAAAGGAGCAGTGAACGTCGGGGGA...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCCCATCCTTCAAAGCCTaGTCGAGTTTCTTGACCTGC +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASAPSFKA*SSFLTC
Trigger: GCAGGTCAAGAAACTCGAGCAGGCTTTGAAGGATGG...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCCATCCTTCAAAGCCTaGTCGAGTTTCTTGACCTGC +
Preference number: 4 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGPSFKA*SSFLTC
Trigger: GCAGGTCAAGAAACTCGAGCAGGCTTTGAAGGATGG...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCTGGGGATCCAGCCCTaGCGACCCATCCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: THLHVGDTPGLGLPFWGCLGIQP*RPILQS
Trigger: GCTTTGAAGGATGGGTCGGCAGGGCTGGATCCCCAG...ACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCCAGGGGTGGGCTCCCTaGCTTCCAGGTCCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: TKTTHLHVGDTPGLGLPFQGWAP*LPGPRG
Trigger: ACCCCTCGGACCTGGAAGGCAGGGAGCCCACCCCTG...GAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCGGACTTTCTGTGGTCTaGACTGGATTTCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: PRRLPGPHPGKSPASARSGLSVV*TGFLSP
Trigger: GGGAGACAGAAATCCAGTGCAGACCACAGAAAGTCC...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCGGACTTTCTGTGGTCTaGACTGGATTTCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASAGLSVV*TGFLSP
Trigger: GGGAGACAGAAATCCAGTGCAGACCACAGAAAGTCC...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGGGTACCGAGGCGCCTaGTTCAGCCGGGACTTCACG +
Preference number: 4 (lower is better)
Translates to: KQPICMSATRLVSGSLSGGYRGA*FSRDFT
Trigger: CGTGAAGTCCCGGCTGAAGCAGGCGCCTCGGTACCC...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp GGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGAAGTACTCGAAGAGCTaGCTCTCCTGGTACTCGATG +
Preference number: 4 (lower is better)
Translates to: GCPPRRLPGPHPGKSPASKYSKS*LSWYSM
Trigger: CATCGAGTACCAGGAGAGGCAGCTCTTCGAGTACTT...CGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCGTTTCACTGGTGAACTaGTGGACAGGAACCCAATCC +
Preference number: 4 (lower is better)
Translates to: PRRLPGPHPGKSPASARSVSLVN*WTGTQS
Trigger: GGATTGGGTTCCTGTCCAGCAGTTCACCAGTGAAAC...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp GGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGTTTCACTGGTGAACTaGTGGACAGGAACCCAATCC +
Preference number: 4 (lower is better)
Translates to: GCPPRRLPGPHPGKSPASVSLVN*WTGTQS
Trigger: GGATTGGGTTCCTGTCCAGCAGTTCACCAGTGAAAC...CGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCGTTTCACTGGTGAACTaGTGGACAGGAACCCAATCC +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASAVSLVN*WTGTQS
Trigger: GGATTGGGTTCCTGTCCAGCAGTTCACCAGTGAAAC...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTCTGGACTCTGGACCGTaGCTGCCGTCTAGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLLDSGP*LPSRGP
Trigger: AGGGCCCCTAGACGGCAGGCACGGTCCAGAGTCCAG...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCCTGGACTCTGGACCGTaGCTGCCGTCTAGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPLDSGP*LPSRGP
Trigger: AGGGCCCCTAGACGGCAGGCACGGTCCAGAGTCCAG...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTCGGAAGGCCTCCCGCTaGAGGGTTCTCTCCTCACGC +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLRKASR*RVLSSR
Trigger: GCGTGAGGAGAGAACCCTGCAGCGGGAGGCCTTCCG...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGAGACCTTTGGCATCCTaGCGGCGCAGCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: KQPICMSATRLVSGSLSGRPLAS*RRSSRS
Trigger: GGAGCGGGAGCTGCGCCGGCAGGATGCCAAAGGTCT...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCTTATTGACACCGCTGTaGTCTCCACTGGGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: PRRLPGPHPGKSPASARSLLTPL*SPLGSV
Trigger: AACACTCCCCAGTGGAGAGCACAGCGGTGTCAATAA...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp GGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGTTATTGACACCGCTGTaGTCTCCACTGGGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: GCPPRRLPGPHPGKSPASLLTPL*SPLGSV
Trigger: AACACTCCCCAGTGGAGAGCACAGCGGTGTCAATAA...CGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTGTCTTGCCCCGGCTCTaGGTCCTGTCCCCCGACGTT +
Preference number: 4 (lower is better)
Translates to: TTKTTHLHVGDTPGLGLPVLPRL*VLSPDV
Trigger: AACGTCGGGGGACAGGACCCAGAGCCGGGGCAAGAC...AGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGTCTTGCCCCGGCTCTaGGTCCTGTCCCCCGACGTT +
Preference number: 4 (lower is better)
Translates to: KQPICMSATRLVSGSLSGVLPRL*VLSPDV
Trigger: AACGTCGGGGGACAGGACCCAGAGCCGGGGCAAGAC...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCCTCACTTCCCGTTCTGGCTaGCTTAGGTCTTGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: ICMSATRLVSGSLSGAVLTSRSG*LRSCPG
Trigger: GCCGGGGCAAGACCTAAGCCAGCCAGAACGGGAAGT...GAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AAGCCACCGCGGCCTCCAGTTCCGCACCGTGACAACCTGGGACCCAGCCTTTCAGGTTCTCAGGAAGGGTaGACCCTGCCTCTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: KPPRPPVPHRDNLGPSLSGSQEG*TLPLPC
Trigger: ACAAGGCAGAGGCAGGGTCCACCCTTCCTGAGAACC...TGAAAGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGAGGCCGCGGTGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTGAGGGGTGGACCCTCTaGCTGACTTCTGAGCCACTC +
Preference number: 4 (lower is better)
Translates to: THLHVGDTPGLGLPFWGCEGWTL*LTSEPL
Trigger: GAGTGGCTCAGAAGTCAGCCAGAGGGTCCACCCCTC...ACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCGGAATGGCCTTCAGTTaGTCCTCAGCTTCTCTCATG +
Preference number: 4 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGGMAFS*SSASLM
Trigger: CATGAGAGAAGCTGAGGACCAACTGAAGGCCATTCC...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCAACAGAACTGGGGAATaGCCTTCAGTTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PRRLPGPHPGKSPASARSNRTGE*PSVGPQ
Trigger: CTGAGGACCAACTGAAGGCCATTCCCCAGTTCTGTT...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp GGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGTCACTGGTGAACTGCTaGACAGGAACCCAATCCTTG +
Preference number: 4 (lower is better)
Translates to: GCPPRRLPGPHPGKSPASSLVNC*TGTQSL
Trigger: CAAGGATTGGGTTCCTGTCCAGCAGTTCACCAGTGA...CGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCTCACTGGTGAACTGCTaGACAGGAACCCAATCCTTG +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLSLVNC*TGTQSL
Trigger: CAAGGATTGGGTTCCTGTCCAGCAGTTCACCAGTGA...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AAGCCACCGCGGCCTCCAGTTCCGCACCGTGACAACCTGGGACCCAGCCTTTCAAGTGGCGGAGGCTCTTaGAGGAGACAGCTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: KPPRPPVPHRDNLGPSLSSGGGS*RRQLCG
Trigger: TCCGCAAAGCTGTCTCCTCCAAGAGCCTCCGCCACT...TGAAAGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGAGGCCGCGGTGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AAGCCACCGCGGCCTCCAGTTCCGCACCGTGACAACCTGGGACCCAGCCTTTCAAAGACCTCCAGGAAGTaGCGGAGGCTCTTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KPPRPPVPHRDNLGPSLSKTSRK*RRLLEE
Trigger: CTCCTCCAAGAGCCTCCGCCACTTCCTGGAGGTCTT...TGAAAGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGAGGCCGCGGTGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCGCAGCTCCCGCTCCTaGATGAAGCCCCGAAACATC +
Preference number: 4 (lower is better)
Translates to: THLHVGDTPGLGLPFWGCRSSRS*MKPRNI
Trigger: GATGTTTCGGGGCTTCATCCAGGAGCGGGAGCTGCG...ACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AAGCCACCGCGGCCTCCAGTTCCGCACCGTGACAACCTGGGACCCAGCCTTTCACCTCAAACAGACCTTTaGCATCCTGCCGGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: KPPRPPVPHRDNLGPSLSPQTDL*HPAGAA
Trigger: AGCTGCGCCGGCAGGATGCCAAAGGTCTGTTTGAGG...TGAAAGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGAGGCCGCGGTGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp ACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCCCTCTGGCTGACTTCTaGGCCACTCCCGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TKTTHLHVGDTPGLGLPFPLADF*ATPASQ
Trigger: CTGGGAGGCGGGAGTGGCTCAGAAGTCAGCCAGAGG...GAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp GAAGAAGCGGACAAAGGCTTCAGACACCACCTCGTTCAAGGGGCTGGACTCTGGCCTCTGGCTGACTTCTaGGCCACTCCCGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: EEADKGFRHHLVQGAGLWPLADF*ATPASQ
Trigger: CTGGGAGGCGGGAGTGGCTCAGAAGTCAGCCAGAGG...CCAGAGTCCAGCCCCTTGAACGAGGTGGTGTCTGAAGCCTTTGTCCGCTTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR TCA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGCCTCTGGCTGACTTCTaGGCCACTCCCGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWPLADF*ATPASQ
Trigger: CTGGGAGGCGGGAGTGGCTCAGAAGTCAGCCAGAGG...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp TCTCCACGAAGAAGCGGACAAAGGCTTCAGACACCACCTCGTTCAAGGGGCTGGGGTGGACCCTCTGGCTaGCTTCTGAGCCACTCCCGC +
Preference number: 4 (lower is better)
Translates to: SPRRSGQRLQTPPRSRGWGGPSG*LLSHSR
Trigger: GCGGGAGTGGCTCAGAAGTCAGCCAGAGGGTCCACC...CCAGCCCCTTGAACGAGGTGGTGTCTGAAGCCTTTGTCCGCTTCTTCGTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR TCA 90 bp CACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTGCCGGGACTTCACGTTaGCCAGGCGCTGGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: HQNNPFACRRHAWSRAPFAGTSR*PGAGCE
Trigger: CTCACAGCCAGCGCCTGGTCAACGTGAAGTCCCGGC...AAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp TCTCCACGAAGAAGCGGACAAAGGCTTCAGACACCACCTCGTTCAAGGGGCTGGGCCGGGACTTCACGTTaGCCAGGCGCTGGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: SPRRSGQRLQTPPRSRGWAGTSR*PGAGCE
Trigger: CTCACAGCCAGCGCCTGGTCAACGTGAAGTCCCGGC...CCAGCCCCTTGAACGAGGTGGTGTCTGAAGCCTTTGTCCGCTTCTTCGTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR TCA 90 bp ACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCGCCGGGACTTCACGTTaGCCAGGCGCTGGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: TKTTHLHVGDTPGLGLPFAGTSR*PGAGCE
Trigger: CTCACAGCCAGCGCCTGGTCAACGTGAAGTCCCGGC...GAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGAGTTCCCGGGCAAGTaGTGGGTACCGAGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: QNNPFACRRHAWSRAPFLEFPGK*WVPRRL
Trigger: CAGGCGCCTCGGTACCCATCACTTGCCCGGGAACTC...CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp ATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCCTCGAGGGAACTGTTGGGTaGGTTCTGGCACGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: ICMSATRLVSGSLSGAVLEGTVG*VLARRQ
Trigger: CTGCCTACGTGCCAGAACTCACCCAACAGTTCCCTC...GAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp GGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGCTCATCCAAGATCCTTaGAAAGAGGCTGAAGCATCC +
Preference number: 4 (lower is better)
Translates to: GCPPRRLPGPHPGKSPASLIQDP*KEAEAS
Trigger: GGATGCTTCAGCCTCTTTTCAAGGATCTTGGATGAG...CGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCCTCATCCAAGATCCTTaGAAAGAGGCTGAAGCATCC +
Preference number: 4 (lower is better)
Translates to: PRRLPGPHPGKSPASARSLIQDP*KEAEAS
Trigger: GGATGCTTCAGCCTCTTTTCAAGGATCTTGGATGAG...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTGTTCCAGGGCCACCTaGAGCTTCCGGGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLCSRAT*SFRGRM
Trigger: CATCCTGCCCCGGAAGCTTCAGGTGGCCCTGGAACA...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCCAGTTCCGCACCGTaGCAACCTGGGACCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLSSSAP*QPGTQP
Trigger: AGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGA...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCTTGGACCTTCCACCTTaGCCTTGTCAGCCAATTTGT +
Preference number: 4 (lower is better)
Translates to: PRRLPGPHPGKSPASARSLDLPP*PCQPIC
Trigger: ACAAATTGGCTGACAAGGTCAAGGTGGAAGGTCCAA...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496613.6
CDS-3UTR GCA 90 bp ACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTGGCTGGCTTAGGTCTTaGCCCGGCTCTGGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: TTKTTHLHVGDTPGLGLPGWLRS*PGSGSC
Trigger: ACAGGACCCAGAGCCGGGGCAAGACCTAAGCCAGCC...AGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCTCTTTCTCTTCTTCCTaGCGTTCTGTGGGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGSFSSS*RSVGLQ
Trigger: TTGGAGACCCACAGAACGGCAGGAAGAAGAGAAAGA...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCCTCGAAGGCGCTTCCCTTTaGCTCCAGGCAGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: ICMSATRLVSGSLSGAVLEGASL*LQAAVF
Trigger: GAAGACTGCTGCCTGGAGGCAAAGGGAAGCGCCTTC...GAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCGATGCTGAGCTTGTCTaGAATGAAGATGACCCTCCT +
Preference number: 4 (lower is better)
Translates to: PRRLPGPHPGKSPASARSDAELV*NEDDPP
Trigger: AGGAGGGTCATCTTCATTGCAGACAAGCTCAGCATC...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275884.10
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCACTCTGGACCGTGCCTaGCGTCTAGGGGCCCTTCGT +
Preference number: 4 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPTLDRA*RLGALR
Trigger: ACGAAGGGCCCCTAGACGGCAGGCACGGTCCAGAGT...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGAGACCTTTGGCATCCTaGCGGCGCAGCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWRPLAS*RRSSRS
Trigger: GGAGCGGGAGCTGCGCCGGCAGGATGCCAAAGGTCT...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp GGACAGCCTCTTCACCCGTTTCTTTCCTCTCCGGACCTCATAAATGGCGTTGATCGGCTCCGCGGGCTCTaGGGCGCATCTTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GQPLHPFLSSPDLINGVDRLRGL*GASWGL
Trigger: GAGCCCCCAAGATGCGCCCCAGAGCCCGCGGAGCCG...ATCAACGCCATTTATGAGGTCCGGAGAGGAAAGAAACGGGTGAAGAGGCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475837.1
CDS-3UTR CCA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCTGTGCTCTCTGTTCCTaGCCTCATTCCATTCTTAGC +
Preference number: 4 (lower is better)
Translates to: CPPRRLPGPHPGKSPASACALCS*PHSILS
Trigger: GCTAAGAATGGAATGAGGCCAGGAACAGAGAGCACA...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCTGTGCTCTCTGTTCCTaGCCTCATTCCATTCTTAGC +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLCALCS*PHSILS
Trigger: GCTAAGAATGGAATGAGGCCAGGAACAGAGAGCACA...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGTCTTGCCCCGGCTCTaGGTCCTGTCCCCCGACGTT +
Preference number: 4 (lower is better)
Translates to: QNNPFACRRHAWSRAPFLVLPRL*VLSPDV
Trigger: AACGTCGGGGGACAGGACCCAGAGCCGGGGCAAGAC...CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CTCCACGAAGAAGCGGACAAAGGCTTCAGACACCACCTCGTTCAAGGGGCTGGAGTCTTGCCCCGGCTCTaGGTCCTGTCCCCCGACGTT +
Preference number: 4 (lower is better)
Translates to: LHEEADKGFRHHLVQGAGVLPRL*VLSPDV
Trigger: AACGTCGGGGGACAGGACCCAGAGCCGGGGCAAGAC...TCCAGCCCCTTGAACGAGGTGGTGTCTGAAGCCTTTGTCCGCTTCTTCGTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGCCACAAGCTCAGGGGTaGGCTCCCTGCCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: KQPICMSATRLVSGSLSGPQAQG*APCLPG
Trigger: ACCTGGAAGGCAGGGAGCCCACCCCTGAGCTTGTGG...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp GGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGCTTCCTGCCGTTCTGTaGGTCTCCAAGGTTAAAGAA +
Preference number: 4 (lower is better)
Translates to: GCPPRRLPGPHPGKSPASLPAVL*VSKVKE
Trigger: TTCTTTAACCTTGGAGACCCACAGAACGGCAGGAAG...CGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCCTTCCTGCCGTTCTGTaGGTCTCCAAGGTTAAAGAA +
Preference number: 4 (lower is better)
Translates to: PRRLPGPHPGKSPASARSLPAVL*VSKVKE
Trigger: TTCTTTAACCTTGGAGACCCACAGAACGGCAGGAAG...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCCAGGAACCCAATCCTTaGCATCGGGAAAACAGAACT +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLQEPNP*HRENRT
Trigger: AGTTCTGTTTTCCCGATGCCAAGGATTGGGTTCCTG...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGTCGACCATGGCGGGTaGCAGCACCGGGATGTAGGT +
Preference number: 4 (lower is better)
Translates to: KQPICMSATRLVSGSLSGVDHGG*QHRDVG
Trigger: ACCTACATCCCGGTGCTGCCACCCGCCATGGTCGAC...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGCCTCGTTCAAGGGGCTaGACTCTGGACCGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: KQPICMSATRLVSGSLSGPRSRG*TLDRAC
Trigger: GCAGGCACGGTCCAGAGTCCAGCCCCTTGAACGAGG...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCCTCAGTGGCGGAGGCTCTTaGAGGAGACAGCTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: ICMSATRLVSGSLSGAVLSGGGS*RRQLCG
Trigger: TCCGCAAAGCTGTCTCCTCCAAGAGCCTCCGCCACT...GAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCGTTTCCAGATACTCTTaGGCTCGGACCTCAAACAGA +
Preference number: 4 (lower is better)
Translates to: PRRLPGPHPGKSPASARSVSRYS*ARTSNR
Trigger: TCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAAC...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp AAGCCACCGCGGCCTCCAGTTCCGCACCGTGACAACCTGGGACCCAGCCTTTCATCTTGTCCTTTATGTTaGGGGACTTGTGCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: KPPRPPVPHRDNLGPSLSSCPLC*GTCAGV
Trigger: GACCCCGGCACAAGTCCCTCAACATAAAGGACAAGA...TGAAAGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGAGGCCGCGGTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGAGTGGAGGGAGGGCTaGTTTTGGAAGGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: KQPICMSATRLVSGSLSGEWREG*FWKGTQ
Trigger: CTGGGTCCCCTTCCAAAATCAGCCCTCCCTCCACTC...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp GTTTCCAGATACTCTTGGGCTCGGACCTCAAACAGACCTTTGGCATCCTGCCGGGAGTTCCCGGGCAAGTaGTGGGTACCGAGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: VSRYSWARTSNRPLASCREFPGK*WVPRRL
Trigger: CAGGCGCCTCGGTACCCATCACTTGCCCGGGAACTC...CCGGCAGGATGCCAAAGGTCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR TCA 90 bp TTGCCTAGTCCCTTCAGGAACTTATTGACACCGCTGTGCTCTCCACTGGGGAGTTGGAGAGCAGCCCGATaGGGAAGGGCGTCGGCGAGC +
Preference number: 4 (lower is better)
Translates to: LPSPFRNLLTPLCSPLGSWRAAR*GRASAS
Trigger: GCTCGCCGACGCCCTTCCTCATCGGGCTGCTCTCCA...ACTCCCCAGTGGAGAGCACAGCGGTGTCAATAAGTTCCTGAAGGGACTAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR TCA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCGCTCCCGCTCCTGGATaGAGCCCCGAAACATCTGAG +
Preference number: 4 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPAPAPG*SPETSE
Trigger: CTCAGATGTTTCGGGGCTTCATCCAGGAGCGGGAGC...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTCCCGCTCCTGGATaGAGCCCCGAAACATCTGAG +
Preference number: 4 (lower is better)
Translates to: KQPICMSATRLVSGSLSGAPAPG*SPETSE
Trigger: CTCAGATGTTTCGGGGCTTCATCCAGGAGCGGGAGC...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTGCTCCCGCTCCTGGATaGAGCCCCGAAACATCTGAG +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLAPAPG*SPETSE
Trigger: CTCAGATGTTTCGGGGCTTCATCCAGGAGCGGGAGC...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCGGCTGGCTTAGGTCTTaGCCCGGCTCTGGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: TKTTHLHVGDTPGLGLPFGWLRS*PGSGSC
Trigger: ACAGGACCCAGAGCCGGGGCAAGACCTAAGCCAGCC...GAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTCTGGGGATCCAGCCCTaGCGACCCATCCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLLGIQP*RPILQS
Trigger: GCTTTGAAGGATGGGTCGGCAGGGCTGGATCCCCAG...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCAGCCCCAGCTTAGTCTaGGCGTACCAGTCCACCCTG +
Preference number: 4 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPSPSLV*AYQSTL
Trigger: CAGGGTGGACTGGTACGCGCAGACTAAGCTGGGGCT...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCTCACTTTTCCTGAGTTaGTCTCCATTGACTGGGACA +
Preference number: 4 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGSLFLS*SPLTGT
Trigger: TGTCCCAGTCAATGGAGAGCAACTCAGGAAAAGTGA...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCTCACTTTTCCTGAGTTaGTCTCCATTGACTGGGACA +
Preference number: 4 (lower is better)
Translates to: PRRLPGPHPGKSPASARSSLFLS*SPLTGT
Trigger: TGTCCCAGTCAATGGAGAGCAACTCAGGAAAAGTGA...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp GGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGAGTAACCGAACCTTCTaGTCCCATCTTCTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: GCPPRRLPGPHPGKSPASSNRTF*SHLLQL
Trigger: TAACTGGAGAAGATGGGAGCAGAAGGTTCGGTTACT...CGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCAGTAACCGAACCTTCTaGTCCCATCTTCTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGSNRTF*SHLLQL
Trigger: TAACTGGAGAAGATGGGAGCAGAAGGTTCGGTTACT...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp AAGCCACCGCGGCCTCCAGTTCCGCACCGTGACAACCTGGGACCCAGCCTTTCACCAGGCGGCTCACAATaGAGTAAACTTCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: KPPRPPVPHRDNLGPSLSPGGSQ*SKLQEG
Trigger: GCCTTCCTGAAGTTTACTGCATTGTGAGCCGCCTGG...TGAAAGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGAGGCCGCGGTGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTAGGGGCCCTTCGTCCTaGTCACAAGCCAGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: TTKTTHLHVGDTPGLGLPRGPSS*SQASSF
Trigger: GAACGAGCTGGCTTGTGAGCAGGACGAAGGGCCCCT...AGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp AAGAAGCGGACAAAGGCTTCAGACACCACCTCGTTCAAGGGGCTGGACTCTGGAAGACCTTTGGCATCCTaGCGGCGCAGCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: KKRTKASDTTSFKGLDSGRPLAS*RRSSRS
Trigger: GGAGCGGGAGCTGCGCCGGCAGGATGCCAAAGGTCT...TCCAGAGTCCAGCCCCTTGAACGAGGTGGTGTCTGAAGCCTTTGTCCGCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CCA 90 bp ATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCCTCTCTGGCTCTGGCAGATaGGCAAGGGTTCTGAACACC +
Preference number: 4 (lower is better)
Translates to: ICMSATRLVSGSLSGAVLSGSGR*ARVLNT
Trigger: GGTGTTCAGAACCCTTGCCCATCTGCCAGAGCCAGA...GAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCACTTGTGCCGGGGTCTaGCTCTGGCAGATGGGCAAG +
Preference number: 4 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPTCAGV*LWQMGK
Trigger: CTTGCCCATCTGCCAGAGCCAGACCCCGGCACAAGT...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTTGCTGGGTGCAGGAGTaGGCACCTCTTTCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: THLHVGDTPGLGLPFWGCCWVQE*APLSSL
Trigger: AAGGGAAGAAAGAGGTGCCCACTCCTGCACCCAGCA...ACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTCAAGTCCCTGGTAACTaGGGATCCAGCCCTGCCGAC +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLQVPGN*GSSPAD
Trigger: GTCGGCAGGGCTGGATCCCCAGTTACCAGGGACTTG...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCGAGGGGTGGACCCTCTaGCTGACTTCTGAGCCACTC +
Preference number: 4 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPEGWTL*LTSEPL
Trigger: GAGTGGCTCAGAAGTCAGCCAGAGGGTCCACCCCTC...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTCCAGGTCCGAGGGGTaGACCCTCTGGCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: TTKTTHLHVGDTPGLGLPSRSEG*TLWLTS
Trigger: AGAAGTCAGCCAGAGGGTCCACCCCTCGGACCTGGA...AGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTCCAGGTCCGAGGGGTaGACCCTCTGGCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPSRSEG*TLWLTS
Trigger: AGAAGTCAGCCAGAGGGTCCACCCCTCGGACCTGGA...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp TCTCCACGAAGAAGCGGACAAAGGCTTCAGACACCACCTCGTTCAAGGGGCTGGCCACAAGCTCAGGGGTaGGCTCCCTGCCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SPRRSGQRLQTPPRSRGWPQAQG*APCLPG
Trigger: ACCTGGAAGGCAGGGAGCCCACCCCTGAGCTTGTGG...CCAGCCCCTTGAACGAGGTGGTGTCTGAAGCCTTTGTCCGCTTCTTCGTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CCA 90 bp ATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCCTCCGTTCTCCGGGGTTTTaGCAGAGGGTTGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: ICMSATRLVSGSLSGAVLRSPGF*QRVDEG
Trigger: CCCTTCATCAACCCTCTGCCAAAACCCCGGAGAACG...GAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGTTGGGTGAGTTCTaGCACGTAGGCAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: HQNNPFACRRHAWSRAPFLLGEF*HVGSPG
Trigger: GCCGGGGCTGCCTACGTGCCAGAACTCACCCAACAG...AAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp TCTCCACGAAGAAGCGGACAAAGGCTTCAGACACCACCTCGTTCAAGGGGCTGGCTGTTGGGTGAGTTCTaGCACGTAGGCAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: SPRRSGQRLQTPPRSRGWLLGEF*HVGSPG
Trigger: GCCGGGGCTGCCTACGTGCCAGAACTCACCCAACAG...CCAGCCCCTTGAACGAGGTGGTGTCTGAAGCCTTTGTCCGCTTCTTCGTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTAACACACAGACCAGGTaGCGGACGCTGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLNTQTR*RTLREE
Trigger: CTCCTCCCTCAGCGTCCGCCACCTGGTCTGTGTGTT...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGAACACACAGACCAGGTaGCGGACGCTGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KQPICMSATRLVSGSLSGNTQTR*RTLREE
Trigger: CTCCTCCCTCAGCGTCCGCCACCTGGTCTGTGTGTT...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCAGCGCCACCATCGCGTaGCAGCACTTGGACAGGATG +
Preference number: 4 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPSATIA*QHLDRM
Trigger: CATCCTGTCCAAGTGCTGCCACGCGATGGTGGCGCT...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275884.10
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTACACGATGTCGACCATaGCGGGTGGCAGCACCGGGA +
Preference number: 4 (lower is better)
Translates to: HQNNPFACRRHAWSRAPFTRCRP*RVAAPG
Trigger: TCCCGGTGCTGCCACCCGCCATGGTCGACATCGTGT...AAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCCTCGTTCAAGGGGCTaGACTCTGGACCGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: HQNNPFACRRHAWSRAPFPRSRG*TLDRAC
Trigger: GCAGGCACGGTCCAGAGTCCAGCCCCTTGAACGAGG...AAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCGCACCGTGACAACCTaGGACCCAGCCTTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: THLHVGDTPGLGLPFWGCRTVTT*DPAFQK
Trigger: TTTCTGAAAGGCTGGGTCCCAGGTTGTCACGGTGCG...ACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTTTGGACCTTCCACCTTaGCCCTCCCCGCGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: WDPAFQKGHQELFLKHRALDLPP*PSPRAA
Trigger: CGCCGCCCGCGGGGAGGGTCAAGGTGGAAGGTCCAA...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275884.10
CDS-3UTR TCA 90 bp AAGCCACCGCGGCCTCCAGTTCCGCACCGTGACAACCTGGGACCCAGCCTTTCATTCTTTTCTCTTTCCTaGAGCCGATGCCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: KPPRPPVPHRDNLGPSLSFFSLS*SRCQAS
Trigger: GGAAGCCTGGCATCGGCTTCAGGAAAGAGAAAAGAA...TGAAAGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGAGGCCGCGGTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGAGTGGAGGGAGGGCTaGTTTTGGAAGGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWEWREG*FWKGTQ
Trigger: CTGGGTCCCCTTCCAAAATCAGCCCTCCCTCCACTC...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTGAGTGGAGGGAGGGCTaGTTTTGGAAGGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: HQNNPFACRRHAWSRAPFEWREG*FWKGTQ
Trigger: CTGGGTCCCCTTCCAAAATCAGCCCTCCCTCCACTC...AAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp AAGCCACCGCGGCCTCCAGTTCCGCACCGTGACAACCTGGGACCCAGCCTTTCACCTCATAAATGGCGTTaGTTCGCAACACCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: KPPRPPVPHRDNLGPSLSPHKWR*FATPAW
Trigger: CCAAGCTGGTGTTGCGAATCAACGCCATTTATGAGG...TGAAAGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGAGGCCGCGGTGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp ACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTACCAGGCGCTGGCTGTaGGCTTTCAGCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TTKTTHLHVGDTPGLGLPTRRWL*AFSFSS
Trigger: AGAGGAGAAGCTGAAAGCTCACAGCCAGCGCCTGGT...AGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp AAGCCACCGCGGCCTCCAGTTCCGCACCGTGACAACCTGGGACCCAGCCTTTCACTGGCAGGAAGTTCTTaGCAAGGATGGTTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: KPPRPPVPHRDNLGPSLSLAGSS*QGWFCP
Trigger: TGGGCAAAACCATCCTTGTCAAGAACTTCCTGCCAG...TGAAAGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGAGGCCGCGGTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTATGTTGAGGGACTTGTaGCGGGGTCTGGCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLMLRDL*RGLALA
Trigger: TGCCAGAGCCAGACCCCGGCACAAGTCCCTCAACAT...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCCTCTCGAGTTTCTTGACCTaGTTCAGCACGGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: ICMSATRLVSGSLSGAVLSSFLT*FSTERG
Trigger: TCCCCTCTCCGTGCTGAAGCAGGTCAAGAAACTCGA...GAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp TCTCCACGAAGAAGCGGACAAAGGCTTCAGACACCACCTCGTTCAAGGGGCTGGCTGGGGATCCAGCCCTaGCGACCCATCCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: SPRRSGQRLQTPPRSRGWLGIQP*RPILQS
Trigger: GCTTTGAAGGATGGGTCGGCAGGGCTGGATCCCCAG...CCAGCCCCTTGAACGAGGTGGTGTCTGAAGCCTTTGTCCGCTTCTTCGTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR GCA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGAGCCCCAGCTTAGTCTaGGCGTACCAGTCCACCCTG +
Preference number: 4 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWSPSLV*AYQSTL
Trigger: CAGGGTGGACTGGTACGCGCAGACTAAGCTGGGGCT...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ACTGGGGAGTGTTTCCAGATACTCTTGGGCTCGGACCTCAAACAGACCTTTGGCGGGTACCGAGGCGCCTaGTTCAGCCGGGACTTCACG +
Preference number: 4 (lower is better)
Translates to: TGECFQILLGSDLKQTFGGYRGA*FSRDFT
Trigger: CGTGAAGTCCCGGCTGAAGCAGGCGCCTCGGTACCC...GCCAAAGGTCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAACACTCCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR GCA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCGAAGGCGCTTCCCTTTaGCTCCAGGCAGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPEGASL*LQAAVF
Trigger: GAAGACTGCTGCCTGGAGGCAAAGGGAAGCGCCTTC...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGACTTCCCGTTCTGGCTaGCTTAGGTCTTGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWTSRSG*LRSCPG
Trigger: GCCGGGGCAAGACCTAAGCCAGCCAGAACGGGAAGT...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGCAAGTCCCTGGTAACTaGGGATCCAGCCCTGCCGAC +
Preference number: 4 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWQVPGN*GSSPAD
Trigger: GTCGGCAGGGCTGGATCCCCAGTTACCAGGGACTTG...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTGGTTCTCAGGAAGGGTaGACCCTGCCTCTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: TTKTTHLHVGDTPGLGLPGSQEG*TLPLPC
Trigger: ACAAGGCAGAGGCAGGGTCCACCCTTCCTGAGAACC...AGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTCCAGGTCCGAGGGGTaGACCCTCTGGCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: TKTTHLHVGDTPGLGLPFSRSEG*TLWLTS
Trigger: AGAAGTCAGCCAGAGGGTCCACCCCTCGGACCTGGA...GAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCCTCTTCTGTGGTCTGCACTaGATTTCTGTCTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: ICMSATRLVSGSLSGAVLFCGLH*ISVSRS
Trigger: GGACCGGGAGACAGAAATCCAGTGCAGACCACAGAA...GAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCAGCGCCACCATCGCGTaGCAGCACTTGGACAGGATG +
Preference number: 4 (lower is better)
Translates to: TKTTHLHVGDTPGLGLPFSATIA*QHLDRM
Trigger: CATCCTGTCCAAGTGCTGCCACGCGATGGTGGCGCT...GAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275884.10
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTGCTTCCGGGGCAGGATaGAGTCCTCATCGTCCATCT +
Preference number: 4 (lower is better)
Translates to: TTKTTHLHVGDTPGLGLPASGAG*SPHRPS
Trigger: AGATGGACGATGAGGACTCCATCCTGCCCCGGAAGC...AGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTGCTTCCGGGGCAGGATaGAGTCCTCATCGTCCATCT +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLASGAG*SPHRPS
Trigger: AGATGGACGATGAGGACTCCATCCTGCCCCGGAAGC...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGAGTGGCGGAGGCTCTTaGAGGAGACAGCTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: KQPICMSATRLVSGSLSGSGGGS*RRQLCG
Trigger: TCCGCAAAGCTGTCTCCTCCAAGAGCCTCCGCCACT...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGCCTCAAACAGACCTTTaGCATCCTGCCGGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: KQPICMSATRLVSGSLSGPQTDL*HPAGAA
Trigger: AGCTGCGCCGGCAGGATGCCAAAGGTCTGTTTGAGG...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCCAGGGCCTTCTGCATaGACCTTTCCTGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: HQNNPFACRRHAWSRAPFPGPSA*TFPVLH
Trigger: GTGGAGGACAGGAAAGGTTCATGCAGAAGGCCCTGG...AAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp ACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTACAATGACTGCTTGGTaGGTGTGTCAGGGATGGAAG +
Preference number: 4 (lower is better)
Translates to: THLHVGDTPGLGLPFWGCTMTAW*VCQGWK
Trigger: CTTCCATCCCTGACACACTCACCAAGCAGTCATTGT...ACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGACCAGGCGCTGGCTGTaGGCTTTCAGCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWTRRWL*AFSFSS
Trigger: AGAGGAGAAGCTGAAAGCTCACAGCCAGCGCCTGGT...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp ACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTCTCCTGGTACTCGATaGGTTCCCGGGCAAGTGATG +
Preference number: 4 (lower is better)
Translates to: TTKTTHLHVGDTPGLGLPSPGTR*VPGQVM
Trigger: CATCACTTGCCCGGGAACTCATCGAGTACCAGGAGA...AGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTGAGGGAACTGTTGGGTaGGTTCTGGCACGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: HQNNPFACRRHAWSRAPFEGTVG*VLARRQ
Trigger: CTGCCTACGTGCCAGAACTCACCCAACAGTTCCCTC...AAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp ACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTAGAATGTTTCACTGGTaGACTGCTGGACAGGAACCC +
Preference number: 4 (lower is better)
Translates to: THLHVGDTPGLGLPFWGCRMFHW*TAGQEP
Trigger: GGGTTCCTGTCCAGCAGTTCACCAGTGAAACATTCT...ACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTCTTCTCATGAGTGGCTaGACCAGGGCAGGAGAGATG +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLLLMSG*TRAGEM
Trigger: CATCTCTCCTGCCCTGGTTCAGCCACTCATGAGAAG...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGCTTCTCATGAGTGGCTaGACCAGGGCAGGAGAGATG +
Preference number: 4 (lower is better)
Translates to: KQPICMSATRLVSGSLSGLLMSG*TRAGEM
Trigger: CATCTCTCCTGCCCTGGTTCAGCCACTCATGAGAAG...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp ACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTGATCACCTCAGTTCCTaGACCTGGCAGGAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: THLHVGDTPGLGLPFWGCDHLSS*TWQEVL
Trigger: AAGAACTTCCTGCCAGGTTCAGGAACTGAGGTGATC...ACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CACTGGGGAGTGTTTCCAGATACTCTTGGGCTCGGACCTCAAACAGACCTTTGGTGTTCCAGGGCCACCTaGAGCTTCCGGGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: HWGVFPDTLGLGPQTDLWCSRAT*SFRGRM
Trigger: CATCCTGCCCCGGAAGCTTCAGGTGGCCCTGGAACA...CCAAAGGTCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAACACTCCCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR GCA 90 bp CACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTATGTTGAGGGACTTGTaGCGGGGTCTGGCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: HQNNPFACRRHAWSRAPFMLRDL*RGLALA
Trigger: TGCCAGAGCCAGACCCCGGCACAAGTCCCTCAACAT...AAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGCAGGGGTGGGCTCCCTaGCTTCCAGGTCCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SLSQKGLLFNARRSPALQQGWAP*LPGPRG
Trigger: ACCCCTCGGACCTGGAAGGCAGGGAGCCCACCCCTG...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTGGTCCCAGGGCCTTCTaGATGAACCTTTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLGPRAF*MNLSCP
Trigger: AGGACAGGAAAGGTTCATGCAGAAGGCCCTGGGACC...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCTCTCAGAGGAAGACTaGAGTAAATCTTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGLSEED*SKSSNS
Trigger: TGAGTTTGAAGATTTACTGCAGTCTTCCTCTGAGAG...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCCTCTCAGAGGAAGACTaGAGTAAATCTTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: PRRLPGPHPGKSPASARSLSEED*SKSSNS
Trigger: TGAGTTTGAAGATTTACTGCAGTCTTCCTCTGAGAG...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTAAGTACTCGAAGAGCTaGCTCTCCTGGTACTCGATG +
Preference number: 4 (lower is better)
Translates to: THLHVGDTPGLGLPFWGCKYSKS*LSWYSM
Trigger: CATCGAGTACCAGGAGAGGCAGCTCTTCGAGTACTT...ACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CCTCCCGCTGCAGGGTTCTCTCCTCACGCTCGCCCGACGTCAGGAACAAAGAGTCCGGCCTGCTTCTTGTaGAAAGACACAACCACAAAG +
Preference number: 4 (lower is better)
Translates to: PPAAGFSPHARPTSGTKSPACFL*KDTTTK
Trigger: CTTTGTGGTTGTGTCTTTGCACAAGAAGCAGGCCGG...ACTCTTTGTTCCTGACGTCGGGCGAGCGTGAGGAGAGAACCCTGCAGCGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR GCA 90 bp GTGTTTCCAGATACTCTTGGGCTCGGACCTCAAACAGACCTTTGGCATCCTGCCACTCTGGACCGTGCCTaGCGTCTAGGGGCCCTTCGT +
Preference number: 4 (lower is better)
Translates to: VFPDTLGLGPQTDLWHPATLDRA*RLGALR
Trigger: ACGAAGGGCCCCTAGACGGCAGGCACGGTCCAGAGT...GGCAGGATGCCAAAGGTCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR GCA 90 bp ACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTTTATTGACACCGCTGTaGTCTCCACTGGGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: THLHVGDTPGLGLPFWGCLLTPL*SPLGSV
Trigger: AACACTCCCCAGTGGAGAGCACAGCGGTGTCAATAA...ACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCCTCTTATTGACACCGCTGTaGTCTCCACTGGGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: ICMSATRLVSGSLSGAVLLLTPL*SPLGSV
Trigger: AACACTCCCCAGTGGAGAGCACAGCGGTGTCAATAA...GAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTCTGGCTCTGGCAGATaGGCAAGGGTTCTGAACACC +
Preference number: 4 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPSGSGR*ARVLNT
Trigger: GGTGTTCAGAACCCTTGCCCATCTGCCAGAGCCAGA...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AAGAAGCGGACAAAGGCTTCAGACACCACCTCGTTCAAGGGGCTGGACTCTGGAACTTGTGCCGGGGTCTaGCTCTGGCAGATGGGCAAG +
Preference number: 4 (lower is better)
Translates to: KKRTKASDTTSFKGLDSGTCAGV*LWQMGK
Trigger: CTTGCCCATCTGCCAGAGCCAGACCCCGGCACAAGT...TCCAGAGTCCAGCCCCTTGAACGAGGTGGTGTCTGAAGCCTTTGTCCGCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTGCTGGGTGCAGGAGTaGGCACCTCTTTCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLCWVQE*APLSSL
Trigger: AAGGGAAGAAAGAGGTGCCCACTCCTGCACCCAGCA...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp GTTTCCAGATACTCTTGGGCTCGGACCTCAAACAGACCTTTGGCATCCTGCCGGACTTCCCGTTCTGGCTaGCTTAGGTCTTGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: VSRYSWARTSNRPLASCRTSRSG*LRSCPG
Trigger: GCCGGGGCAAGACCTAAGCCAGCCAGAACGGGAAGT...CCGGCAGGATGCCAAAGGTCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CCA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGTTCTCAGGAAGGGTaGACCCTGCCTCTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWGSQEG*TLPLPC
Trigger: ACAAGGCAGAGGCAGGGTCCACCCTTCCTGAGAACC...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCCGTTCTCCGGGGTTTTaGCAGAGGGTTGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPRSPGF*QRVDEG
Trigger: CCCTTCATCAACCCTCTGCCAAAACCCCGGAGAACG...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTGGAATGGCCTTCAGTTaGTCCTCAGCTTCTCTCATG +
Preference number: 4 (lower is better)
Translates to: THLHVGDTPGLGLPFWGCGMAFS*SSASLM
Trigger: CATGAGAGAAGCTGAGGACCAACTGAAGGCCATTCC...ACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CCTCCCGCTGCAGGGTTCTCTCCTCACGCTCGCCCGACGTCAGGAACAAAGAGTTCACTGGTGAACTGCTaGACAGGAACCCAATCCTTG +
Preference number: 4 (lower is better)
Translates to: PPAAGFSPHARPTSGTKSSLVNC*TGTQSL
Trigger: CAAGGATTGGGTTCCTGTCCAGCAGTTCACCAGTGA...ACTCTTTGTTCCTGACGTCGGGCGAGCGTGAGGAGAGAACCCTGCAGCGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CCA 90 bp ACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCGCTTCCGGGGCAGGATaGAGTCCTCATCGTCCATCT +
Preference number: 4 (lower is better)
Translates to: TKTTHLHVGDTPGLGLPFASGAG*SPHRPS
Trigger: AGATGGACGATGAGGACTCCATCCTGCCCCGGAAGC...GAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTCGCACCGTGACAACCTaGGACCCAGCCTTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: TTKTTHLHVGDTPGLGLPRTVTT*DPAFQK
Trigger: TTTCTGAAAGGCTGGGTCCCAGGTTGTCACGGTGCG...AGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CACTGGGGAGTGTTTCCAGATACTCTTGGGCTCGGACCTCAAACAGACCTTTGGTGTCGGCGACACGCCTaGTCTCGGGCTCCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: HWGVFPDTLGLGPQTDLWCRRHA*SRAPFL
Trigger: CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACA...CCAAAGGTCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAACACTCCCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CCA 90 bp CAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGCTCAGGTTTTCAGTCTaGCTGTGGCTGCCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: QNNPFACRRHAWSRAPFLLRFSV*LWLPLA
Trigger: GGCCAAGGGCAGCCACAGCCAGACTGAAAACCTGAG...CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496613.6
CDS-3UTR TCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTTGTCCTTTATGTTaGGGGACTTGTGCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLSCPLC*GTCAGV
Trigger: GACCCCGGCACAAGTCCCTCAACATAAAGGACAAGA...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCCTGCTCGAGTTTCTTaGCCTGCTTCAGCACGGAGA +
Preference number: 4 (lower is better)
Translates to: HQNNPFACRRHAWSRAPFPARVS*PASARR
Trigger: TCTCCGTGCTGAAGCAGGTCAAGAAACTCGAGCAGG...AAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATGGTGGACCCTCTGGCTaGCTTCTGAGCCACTCCCGC +
Preference number: 4 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHGGPSG*LLSHSR
Trigger: GCGGGAGTGGCTCAGAAGTCAGCCAGAGGGTCCACC...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGCTTCTCCGGCATGTTTaGACGTTCTCCGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: KQPICMSATRLVSGSLSGLLRHV*TFSGVL
Trigger: CAAAACCCCGGAGAACGTTCAAACATGCCGGAGAAG...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CCTGAGTTGCTCTCCATTGACTGGGACAGCCTCTTCACCCGTTTCTTTCCTCTCGAGTGGAGGGAGGGCTaGTTTTGGAAGGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: PELLSIDWDSLFTRFFPLEWREG*FWKGTQ
Trigger: CTGGGTCCCCTTCCAAAATCAGCCCTCCCTCCACTC...GAGAGGAAAGAAACGGGTGAAGAGGCTGTCCCAGTCAATGGAGAGCAACTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475837.1
CDS-3UTR TCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGCCGGGACTTCACGTTaGCCAGGCGCTGGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLAGTSR*PGAGCE
Trigger: CTCACAGCCAGCGCCTGGTCAACGTGAAGTCCCGGC...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGAGTTCCCGGGCAAGTaGTGGGTACCGAGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLEFPGK*WVPRRL
Trigger: CAGGCGCCTCGGTACCCATCACTTGCCCGGGAACTC...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTGAGTTCCCGGGCAAGTaGTGGGTACCGAGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: WDPAFQKGHQELFLKHRAEFPGK*WVPRRL
Trigger: CAGGCGCCTCGGTACCCATCACTTGCCCGGGAACTC...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp ACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTCTCCTGGTACTCGATaGGTTCCCGGGCAAGTGATG +
Preference number: 4 (lower is better)
Translates to: TKTTHLHVGDTPGLGLPFSPGTR*VPGQVM
Trigger: CATCACTTGCCCGGGAACTCATCGAGTACCAGGAGA...GAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTTCTCCTGGTACTCGATaGGTTCCCGGGCAAGTGATG +
Preference number: 4 (lower is better)
Translates to: HQNNPFACRRHAWSRAPFSPGTR*VPGQVM
Trigger: CATCACTTGCCCGGGAACTCATCGAGTACCAGGAGA...AAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGCCTTCAGGAACTTATTaGCACCGCTGTGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: KQPICMSATRLVSGSLSGPSGTY*HRCALH
Trigger: GTGGAGAGCACAGCGGTGTCAATAAGTTCCTGAAGG...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp TTGCCTAGTCCCTTCAGGAACTTATTGACACCGCTGTGCTCTCCACTGGGGAGTGCTTCTTCCCAGCCCTaGTGGCTTCTGCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LPSPFRNLLTPLCSPLGSASSQP*WLLQLG
Trigger: ACCCAGCTGCAGAAGCCAGCAGGGCTGGGAAGAAGC...ACTCCCCAGTGGAGAGCACAGCGGTGTCAATAAGTTCCTGAAGGGACTAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR GCA 90 bp AAGAAGCGGACAAAGGCTTCAGACACCACCTCGTTCAAGGGGCTGGACTCTGGAATGTTGAGGGACTTGTaGCGGGGTCTGGCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: KKRTKASDTTSFKGLDSGMLRDL*RGLALA
Trigger: TGCCAGAGCCAGACCCCGGCACAAGTCCCTCAACAT...TCCAGAGTCCAGCCCCTTGAACGAGGTGGTGTCTGAAGCCTTTGTCCGCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR GCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCGAGTTTCTTGACCTaGTTCAGCACGGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLSSFLT*FSTERG
Trigger: TCCCCTCTCCGTGCTGAAGCAGGTCAAGAAACTCGA...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCACCAGTCCACCCTGCTaGTCTCAGAGGAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: TKTTHLHVGDTPGLGLPFTSPPC*SQRKTA
Trigger: TGCAGTCTTCCTCTGAGAGCAGCAGGGTGGACTGGT...GAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCCGTACCAGTCCACCCTaGTGCTCTCAGAGGAAGACT +
Preference number: 4 (lower is better)
Translates to: TKTTHLHVGDTPGLGLPFRTSPP*CSQRKT
Trigger: AGTCTTCCTCTGAGAGCAGCAGGGTGGACTGGTACG...GAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGCGTACCAGTCCACCCTaGTGCTCTCAGAGGAAGACT +
Preference number: 4 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWRTSPP*CSQRKT
Trigger: AGTCTTCCTCTGAGAGCAGCAGGGTGGACTGGTACG...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGCCAGGCGGCTCACAATaGAGTAAACTTCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: KQPICMSATRLVSGSLSGPGGSQ*SKLQEG
Trigger: GCCTTCCTGAAGTTTACTGCATTGTGAGCCGCCTGG...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTCGGAAGGCCTCCCGCTaGAGGGTTCTCTCCTCACGC +
Preference number: 4 (lower is better)
Translates to: WDPAFQKGHQELFLKHRARKASR*RVLSSR
Trigger: GCGTGAGGAGAGAACCCTGCAGCGGGAGGCCTTCCG...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AAGCCACCGCGGCCTCCAGTTCCGCACCGTGACAACCTGGGACCCAGCCTTTCATCTCTAGGAATGGAATaGAGGACTAAAGTGGATGCC +
Preference number: 4 (lower is better)
Translates to: KPPRPPVPHRDNLGPSLSSLGME*RTKVDA
Trigger: GGCATCCACTTTAGTCCTCCATTCCATTCCTAGAGA...TGAAAGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGAGGCCGCGGTGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGTCTGGCTCTGGCAGATaGGCAAGGGTTCTGAACACC +
Preference number: 4 (lower is better)
Translates to: QNNPFACRRHAWSRAPFLSGSGR*ARVLNT
Trigger: GGTGTTCAGAACCCTTGCCCATCTGCCAGAGCCAGA...CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGCTGGGTGCAGGAGTaGGCACCTCTTTCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: TKTTHLHVGDTPGLGLPFCWVQE*APLSSL
Trigger: AAGGGAAGAAAGAGGTGCCCACTCCTGCACCCAGCA...GAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTTGTGCTCTCTGTTCCTaGCCTCATTCCATTCTTAGC +
Preference number: 4 (lower is better)
Translates to: THLHVGDTPGLGLPFWGCCALCS*PHSILS
Trigger: GCTAAGAATGGAATGAGGCCAGGAACAGAGAGCACA...ACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp GTTTCCAGATACTCTTGGGCTCGGACCTCAAACAGACCTTTGGCATCCTGCCGGGGTTCTCAGGAAGGGTaGACCCTGCCTCTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: VSRYSWARTSNRPLASCRGSQEG*TLPLPC
Trigger: ACAAGGCAGAGGCAGGGTCCACCCTTCCTGAGAACC...CCGGCAGGATGCCAAAGGTCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CCA 90 bp ACTGGGGAGTGTTTCCAGATACTCTTGGGCTCGGACCTCAAACAGACCTTTGGCTCCAGGTCCGAGGGGTaGACCCTCTGGCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: TGECFQILLGSDLKQTFGSRSEG*TLWLTS
Trigger: AGAAGTCAGCCAGAGGGTCCACCCCTCGGACCTGGA...GCCAAAGGTCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAACACTCCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CCA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTCTGTGGTCTGCACTaGATTTCTGTCTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPFCGLH*ISVSRS
Trigger: GGACCGGGAGACAGAAATCCAGTGCAGACCACAGAA...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTGCTCTCCATTGACTaGGACAGCCTCTTCACCCGT +
Preference number: 4 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPLLSID*DSLFTR
Trigger: ACGGGTGAAGAGGCTGTCCCAGTCAATGGAGAGCAA...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGAAGAGCTGCCTCTCCTaGTACTCGATGAGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWKSCLS*YSMSSR
Trigger: CCGGGAACTCATCGAGTACCAGGAGAGGCAGCTCTT...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGACACTTCTCATGAGTaGCTGAACCAGGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: KQPICMSATRLVSGSLSGDTSHE*LNQGRR
Trigger: TCTCCTGCCCTGGTTCAGCCACTCATGAGAAGTGTC...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCTGTGGCTGCCCTTaGCCGGCCTGCACACTGTCA +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLGCGCP*PACTLS
Trigger: TGACAGTGTGCAGGCCGGCCAAGGGCAGCCACAGCC...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTCTGAAGCCTGACTCCTaGTCAGTCTCTAGGAATGGA +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLLKPDS*SVSRNG
Trigger: TCCATTCCTAGAGACTGATCAGGAGTCAGGCTTCAG...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp ACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTTCTTGACTCTAGCGTaGGGTTGTGGAGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: TKTTHLHVGDTPGLGLPFFLTLA*GCGGLP
Trigger: TGGAAGGCCTCCACAACCTCACGCTAGAGTCAAGAA...GAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGTCTTGTCCTTTATGTTaGGGGACTTGTGCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: QNNPFACRRHAWSRAPFLSCPLC*GTCAGV
Trigger: GACCCCGGCACAAGTCCCTCAACATAAAGGACAAGA...CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGAGAGGGGATCGTTCTaGAAGCGTAGCTTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: QNNPFACRRHAWSRAPFLERGSF*KRSLPS
Trigger: ACTTGGCAAGCTACGCTTTCAGAACGATCCCCTCTC...CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp GTTTCCAGATACTCTTGGGCTCGGACCTCAAACAGACCTTTGGCATCCTGCCGGCCTGCTCGAGTTTCTTaGCCTGCTTCAGCACGGAGA +
Preference number: 4 (lower is better)
Translates to: VSRYSWARTSNRPLASCRPARVS*PASARR
Trigger: TCTCCGTGCTGAAGCAGGTCAAGAAACTCGAGCAGG...CCGGCAGGATGCCAAAGGTCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR TCA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTCTGGCTGACTTCTaGGCCACTCCCGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSPLADF*ATPASQ
Trigger: CTGGGAGGCGGGAGTGGCTCAGAAGTCAGCCAGAGG...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp GTGTTTCCAGATACTCTTGGGCTCGGACCTCAAACAGACCTTTGGCATCCTGCCCCAGGGCCTTCTGCATaGACCTTTCCTGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: VFPDTLGLGPQTDLWHPAPGPSA*TFPVLH
Trigger: GTGGAGGACAGGAAAGGTTCATGCAGAAGGCCCTGG...GGCAGGATGCCAAAGGTCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR TCA 90 bp GACACCGCTGTGCTCTCCACTGGGGAGTGTTTCCAGATACTCTTGGGCTCGGACTTCTTTTCTCTTTCCTaGAGCCGATGCCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: DTAVLSTGECFQILLGSDFFSLS*SRCQAS
Trigger: GGAAGCCTGGCATCGGCTTCAGGAAAGAGAAAAGAA...GTCCGAGCCCAAGAGTATCTGGAAACACTCCCCAGTGGAGAGCACAGCGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR TCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTTCTTTTCTCTTTCCTaGAGCCGATGCCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLFFSLS*SRCQAS
Trigger: GGAAGCCTGGCATCGGCTTCAGGAAAGAGAAAAGAA...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CTGCAGGGTTCTCTCCTCACGCTCGCCCGACGTCAGGAACAAAGAGTAGTGTCCAGCAGGTTTGGACAATaGCTGCTTGGTGAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: LQGSLLTLARRQEQRVVSSRFGQ*LLGECV
Trigger: GACACACTCACCAAGCAGTCATTGTCCAAACCTGCT...GGACACTACTCTTTGTTCCTGACGTCGGGCGAGCGTGAGGAGAGAACCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR TCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGAGCAGGTTTGGACAATaGCTGCTTGGTGAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: KQPICMSATRLVSGSLSGSRFGQ*LLGECV
Trigger: GACACACTCACCAAGCAGTCATTGTCCAAACCTGCT...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp TTGCCTAGTCCCTTCAGGAACTTATTGACACCGCTGTGCTCTCCACTGGGGAGTGAGGGAACTGTTGGGTaGGTTCTGGCACGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: LPSPFRNLLTPLCSPLGSEGTVG*VLARRQ
Trigger: CTGCCTACGTGCCAGAACTCACCCAACAGTTCCCTC...ACTCCCCAGTGGAGAGCACAGCGGTGTCAATAAGTTCCTGAAGGGACTAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR TCA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCCTGGCAGGAAGTTCTTaGCAAGGATGGTTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPLAGSS*QGWFCP
Trigger: TGGGCAAAACCATCCTTGTCAAGAACTTCCTGCCAG...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp TCTCCACGAAGAAGCGGACAAAGGCTTCAGACACCACCTCGTTCAAGGGGCTGGCCTTCAGGAACTTATTaGCACCGCTGTGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: SPRRSGQRLQTPPRSRGWPSGTY*HRCALH
Trigger: GTGGAGAGCACAGCGGTGTCAATAAGTTCCTGAAGG...CCAGCCCCTTGAACGAGGTGGTGTCTGAAGCCTTTGTCCGCTTCTTCGTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR TCA 90 bp CAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGCCTTCAGGAACTTATTaGCACCGCTGTGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: QNNPFACRRHAWSRAPFLPSGTY*HRCALH
Trigger: GTGGAGAGCACAGCGGTGTCAATAAGTTCCTGAAGG...CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCCCCCGACGTTCACTaGTCCTTTATTCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLSPDVH*SFIPLL
Trigger: AAGGAGAGGAATAAAGGAGCAGTGAACGTCGGGGGA...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTTCTGAAAGCGTAGCTTaGCAAGTCTTGGCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: HQNNPFACRRHAWSRAPFSESVA*QVLALG
Trigger: GCCGAGAGCCAAGACTTGGCAAGCTACGCTTTCAGA...AAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp GAAGAAGCGGACAAAGGCTTCAGACACCACCTCGTTCAAGGGGCTGGACTCTGGTCGAGTTTCTTGACCTaGTTCAGCACGGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: EEADKGFRHHLVQGAGLWSSFLT*FSTERG
Trigger: TCCCCTCTCCGTGCTGAAGCAGGTCAAGAAACTCGA...CCAGAGTCCAGCCCCTTGAACGAGGTGGTGTCTGAAGCCTTTGTCCGCTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR GCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTCCATCCTTCAAAGCCTaGTCGAGTTTCTTGACCTGC +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLPSFKA*SSFLTC
Trigger: GCAGGTCAAGAAACTCGAGCAGGCTTTGAAGGATGG...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp GGACAGCCTCTTCACCCGTTTCTTTCCTCTCCGGACCTCATAAATGGCGTTGATAGCCCCAGCTTAGTCTaGGCGTACCAGTCCACCCTG +
Preference number: 4 (lower is better)
Translates to: GQPLHPFLSSPDLINGVDSPSLV*AYQSTL
Trigger: CAGGGTGGACTGGTACGCGCAGACTAAGCTGGGGCT...ATCAACGCCATTTATGAGGTCCGGAGAGGAAAGAAACGGGTGAAGAGGCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475837.1
CDS-3UTR GCA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCAGGGTACCGAGGCGCCTaGTTCAGCCGGGACTTCACG +
Preference number: 4 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSGYRGA*FSRDFT
Trigger: CGTGAAGTCCCGGCTGAAGCAGGCGCCTCGGTACCC...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCCCGGCCTGCTTCTTGTaGAAAGACACAACCACAAAG +
Preference number: 4 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPPACFL*KDTTTK
Trigger: CTTTGTGGTTGTGTCTTTGCACAAGAAGCAGGCCGG...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTGTTTCACTGGTGAACTaGTGGACAGGAACCCAATCC +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLVSLVN*WTGTQS
Trigger: GGATTGGGTTCCTGTCCAGCAGTTCACCAGTGAAAC...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTACTCTGGACCGTGCCTaGCGTCTAGGGGCCCTTCGT +
Preference number: 4 (lower is better)
Translates to: WDPAFQKGHQELFLKHRATLDRA*RLGALR
Trigger: ACGAAGGGCCCCTAGACGGCAGGCACGGTCCAGAGT...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGAAATTTCATTTTATTaGCTAGTCCCTTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLEISFY*LVPSGT
Trigger: AGTTCCTGAAGGGACTAGGCAATAAAATGAAATTTC...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCCCAAAACAACCCATTTaGATGTCGGCGACACGCCTG +
Preference number: 4 (lower is better)
Translates to: TKTTHLHVGDTPGLGLPFPKQPI*MSATRL
Trigger: CAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGG...GAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp TCTCTCCTCACGCTCGCCCGACGTCAGGAACAAAGAGTAGTGTCCCACAATCTCTCTGGCTCTGGCAGATaGGCAAGGGTTCTGAACACC +
Preference number: 4 (lower is better)
Translates to: SLLTLARRQEQRVVSHNLSGSGR*ARVLNT
Trigger: GGTGTTCAGAACCCTTGCCCATCTGCCAGAGCCAGA...GAGATTGTGGGACACTACTCTTTGTTCCTGACGTCGGGCGAGCGTGAGGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CCA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCAGTCTTGCCCCGGCTCTaGGTCCTGTCCCCCGACGTT +
Preference number: 4 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSVLPRL*VLSPDV
Trigger: AACGTCGGGGGACAGGACCCAGAGCCGGGGCAAGAC...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGCCACAAGCTCAGGGGTaGGCTCCCTGCCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SLSQKGLLFNARRSPALQPQAQG*APCLPG
Trigger: ACCTGGAAGGCAGGGAGCCCACCCCTGAGCTTGTGG...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp CACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTTTCTGTGGTCTGCACTaGATTTCTGTCTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: HQNNPFACRRHAWSRAPFFCGLH*ISVSRS
Trigger: GGACCGGGAGACAGAAATCCAGTGCAGACCACAGAA...AAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTTTCGCAACACCAGCTTaGGTATCTTTCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: THLHVGDTPGLGLPFWGCFATPA*VSFSSS
Trigger: GGAAGAAGAGAAAGATACCCAAGCTGGTGTTGCGAA...ACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTACTGTTGGGTGAGTTCTaGCACGTAGGCAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLLLGEF*HVGSPG
Trigger: GCCGGGGCTGCCTACGTGCCAGAACTCACCCAACAG...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp GACACCGCTGTGCTCTCCACTGGGGAGTGTTTCCAGATACTCTTGGGCTCGGACGGAATGGCCTTCAGTTaGTCCTCAGCTTCTCTCATG +
Preference number: 4 (lower is better)
Translates to: DTAVLSTGECFQILLGSDGMAFS*SSASLM
Trigger: CATGAGAGAAGCTGAGGACCAACTGAAGGCCATTCC...GTCCGAGCCCAAGAGTATCTGGAAACACTCCCCAGTGGAGAGCACAGCGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTAACAGAACTGGGGAATaGCCTTCAGTTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLNRTGE*PSVGPQ
Trigger: CTGAGGACCAACTGAAGGCCATTCCCCAGTTCTGTT...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTGACACTTCTCATGAGTaGCTGAACCAGGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: HQNNPFACRRHAWSRAPFDTSHE*LNQGRR
Trigger: TCTCCTGCCCTGGTTCAGCCACTCATGAGAAGTGTC...AAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGACACTTCTCATGAGTaGCTGAACCAGGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: QNNPFACRRHAWSRAPFLDTSHE*LNQGRR
Trigger: TCTCCTGCCCTGGTTCAGCCACTCATGAGAAGTGTC...CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTGTCGACCATGGCGGGTaGCAGCACCGGGATGTAGGT +
Preference number: 4 (lower is better)
Translates to: WDPAFQKGHQELFLKHRAVDHGG*QHRDVG
Trigger: ACCTACATCCCGGTGCTGCCACCCGCCATGGTCGAC...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACGCTCGCCCGACGTCAGGAACAAAGAGTAGTGTCCCACAATCTCCACGAAGAAAAGACCTCCAGGAAGTaGCGGAGGCTCTTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: TLARRQEQRVVSHNLHEEKTSRK*RRLLEE
Trigger: CTCCTCCAAGAGCCTCCGCCACTTCCTGGAGGTCTT...TTCTTCGTGGAGATTGTGGGACACTACTCTTTGTTCCTGACGTCGGGCGAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR TCA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGTTCTTTTCTCTTTCCTaGAGCCGATGCCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWFFSLS*SRCQAS
Trigger: GGAAGCCTGGCATCGGCTTCAGGAAAGAGAAAAGAA...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp ACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCACAATGACTGCTTGGTaGGTGTGTCAGGGATGGAAG +
Preference number: 4 (lower is better)
Translates to: TKTTHLHVGDTPGLGLPFTMTAW*VCQGWK
Trigger: CTTCCATCCCTGACACACTCACCAAGCAGTCATTGT...GAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCCTCATAAATGGCGTTaGTTCGCAACACCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: HQNNPFACRRHAWSRAPFPHKWR*FATPAW
Trigger: CCAAGCTGGTGTTGCGAATCAACGCCATTTATGAGG...AAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGCCTCATAAATGGCGTTaGTTCGCAACACCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: QNNPFACRRHAWSRAPFLPHKWR*FATPAW
Trigger: CCAAGCTGGTGTTGCGAATCAACGCCATTTATGAGG...CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp ACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCAGAATGTTTCACTGGTaGACTGCTGGACAGGAACCC +
Preference number: 4 (lower is better)
Translates to: TKTTHLHVGDTPGLGLPFRMFHW*TAGQEP
Trigger: GGGTTCCTGTCCAGCAGTTCACCAGTGAAACATTCT...GAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp ACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTCTCATCCAAGATCCTTaGAAAGAGGCTGAAGCATCC +
Preference number: 4 (lower is better)
Translates to: TTKTTHLHVGDTPGLGLPLIQDP*KEAEAS
Trigger: GGATGCTTCAGCCTCTTTTCAAGGATCTTGGATGAG...AGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTGATCACCTCAGTTCCTaGACCTGGCAGGAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: HQNNPFACRRHAWSRAPFDHLSS*TWQEVL
Trigger: AAGAACTTCCTGCCAGGTTCAGGAACTGAGGTGATC...AAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGATCACCTCAGTTCCTaGACCTGGCAGGAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: QNNPFACRRHAWSRAPFLDHLSS*TWQEVL
Trigger: AAGAACTTCCTGCCAGGTTCAGGAACTGAGGTGATC...CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGTCCCCCGACGTTCACTaGTCCTTTATTCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWSPDVH*SFIPLL
Trigger: AAGGAGAGGAATAAAGGAGCAGTGAACGTCGGGGGA...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCAGGCTGGCTTAGGTCTTaGCCCGGCTCTGGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSGWLRS*PGSGSC
Trigger: ACAGGACCCAGAGCCGGGGCAAGACCTAAGCCAGCC...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGCCATCCTTCAAAGCCTaGTCGAGTTTCTTGACCTGC +
Preference number: 4 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWPSFKA*SSFLTC
Trigger: GCAGGTCAAGAAACTCGAGCAGGCTTTGAAGGATGG...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTACTGGGGATCCAGCCCTaGCGACCCATCCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLLGIQP*RPILQS
Trigger: GCTTTGAAGGATGGGTCGGCAGGGCTGGATCCCCAG...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGACTTTCTGTGGTCTaGACTGGATTTCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWGLSVV*TGFLSP
Trigger: GGGAGACAGAAATCCAGTGCAGACCACAGAAAGTCC...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ACGCTCGCCCGACGTCAGGAACAAAGAGTAGTGTCCCACAATCTCCACGAAGAAACCAGTCCACCCTGCTaGTCTCAGAGGAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: TLARRQEQRVVSHNLHEETSPPC*SQRKTA
Trigger: TGCAGTCTTCCTCTGAGAGCAGCAGGGTGGACTGGT...TTCTTCGTGGAGATTGTGGGACACTACTCTTTGTTCCTGACGTCGGGCGAGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR GCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATAGCCCCAGCTTAGTCTaGGCGTACCAGTCCACCCTG +
Preference number: 4 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHSPSLV*AYQSTL
Trigger: CAGGGTGGACTGGTACGCGCAGACTAAGCTGGGGCT...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGTCTTTCTCTTCTTCCTaGCGTTCTGTGGGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: KQPICMSATRLVSGSLSGSFSSS*RSVGLQ
Trigger: TTGGAGACCCACAGAACGGCAGGAAGAAGAGAAAGA...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTTTCTCTTCTTCCTaGCGTTCTGTGGGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLSFSSS*RSVGLQ
Trigger: TTGGAGACCCACAGAACGGCAGGAAGAAGAGAAAGA...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCAAGTACTCGAAGAGCTaGCTCTCCTGGTACTCGATG +
Preference number: 4 (lower is better)
Translates to: TKTTHLHVGDTPGLGLPFKYSKS*LSWYSM
Trigger: CATCGAGTACCAGGAGAGGCAGCTCTTCGAGTACTT...GAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCCGGCCTGCTTCTTGTaGAAAGACACAACCACAAAG +
Preference number: 4 (lower is better)
Translates to: HQNNPFACRRHAWSRAPFPACFL*KDTTTK
Trigger: CTTTGTGGTTGTGTCTTTGCACAAGAAGCAGGCCGG...AAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGACTTGTGCCGGGGTCTaGCTCTGGCAGATGGGCAAG +
Preference number: 4 (lower is better)
Translates to: SLSQKGLLFNARRSPALQTCAGV*LWQMGK
Trigger: CTTGCCCATCTGCCAGAGCCAGACCCCGGCACAAGT...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTACTTGTGCCGGGGTCTaGCTCTGGCAGATGGGCAAG +
Preference number: 4 (lower is better)
Translates to: WDPAFQKGHQELFLKHRATCAGV*LWQMGK
Trigger: CTTGCCCATCTGCCAGAGCCAGACCCCGGCACAAGT...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAACTTCCCGTTCTGGCTaGCTTAGGTCTTGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLTSRSG*LRSCPG
Trigger: GCCGGGGCAAGACCTAAGCCAGCCAGAACGGGAAGT...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGCAAGTCCCTGGTAACTaGGGATCCAGCCCTGCCGAC +
Preference number: 4 (lower is better)
Translates to: SLSQKGLLFNARRSPALQQVPGN*GSSPAD
Trigger: GTCGGCAGGGCTGGATCCCCAGTTACCAGGGACTTG...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTGAGGGGTGGACCCTCTaGCTGACTTCTGAGCCACTC +
Preference number: 4 (lower is better)
Translates to: WDPAFQKGHQELFLKHRAEGWTL*LTSEPL
Trigger: GAGTGGCTCAGAAGTCAGCCAGAGGGTCCACCCCTC...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTATCCAGGTCCGAGGGGTaGACCCTCTGGCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLSRSEG*TLWLTS
Trigger: AGAAGTCAGCCAGAGGGTCCACCCCTCGGACCTGGA...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp CACTGGGGAGTGTTTCCAGATACTCTTGGGCTCGGACCTCAAACAGACCTTTGGCGTTCTCCGGGGTTTTaGCAGAGGGTTGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: HWGVFPDTLGLGPQTDLWRSPGF*QRVDEG
Trigger: CCCTTCATCAACCCTCTGCCAAAACCCCGGAGAACG...CCAAAGGTCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAACACTCCCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGCTTCCTGCCGTTCTGTaGGTCTCCAAGGTTAAAGAA +
Preference number: 4 (lower is better)
Translates to: KQPICMSATRLVSGSLSGLPAVL*VSKVKE
Trigger: TTCTTTAACCTTGGAGACCCACAGAACGGCAGGAAG...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp TCTCTCCTCACGCTCGCCCGACGTCAGGAACAAAGAGTAGTGTCCCACAATCTCTTGCTCTCCATTGACTaGGACAGCCTCTTCACCCGT +
Preference number: 4 (lower is better)
Translates to: SLLTLARRQEQRVVSHNLLLSID*DSLFTR
Trigger: ACGGGTGAAGAGGCTGTCCCAGTCAATGGAGAGCAA...GAGATTGTGGGACACTACTCTTTGTTCCTGACGTCGGGCGAGCGTGAGGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CCA 90 bp CACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTGGAATGGCCTTCAGTTaGTCCTCAGCTTCTCTCATG +
Preference number: 4 (lower is better)
Translates to: HQNNPFACRRHAWSRAPFGMAFS*SSASLM
Trigger: CATGAGAGAAGCTGAGGACCAACTGAAGGCCATTCC...AAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CTCCACGAAGAAGCGGACAAAGGCTTCAGACACCACCTCGTTCAAGGGGCTGGAAACAGAACTGGGGAATaGCCTTCAGTTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LHEEADKGFRHHLVQGAGNRTGE*PSVGPQ
Trigger: CTGAGGACCAACTGAAGGCCATTCCCCAGTTCTGTT...TCCAGCCCCTTGAACGAGGTGGTGTCTGAAGCCTTTGTCCGCTTCTTCGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CCA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCCAGGAACCCAATCCTTaGCATCGGGAAAACAGAACT +
Preference number: 4 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPQEPNP*HRENRT
Trigger: AGTTCTGTTTTCCCGATGCCAAGGATTGGGTTCCTG...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGCAGGAACCCAATCCTTaGCATCGGGAAAACAGAACT +
Preference number: 4 (lower is better)
Translates to: KQPICMSATRLVSGSLSGQEPNP*HRENRT
Trigger: AGTTCTGTTTTCCCGATGCCAAGGATTGGGTTCCTG...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGTCACTGGTGAACTGCTaGACAGGAACCCAATCCTTG +
Preference number: 4 (lower is better)
Translates to: QNNPFACRRHAWSRAPFLSLVNC*TGTQSL
Trigger: CAAGGATTGGGTTCCTGTCCAGCAGTTCACCAGTGA...CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAAACACACAGACCAGGTaGCGGACGCTGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLNTQTR*RTLREE
Trigger: CTCCTCCCTCAGCGTCCGCCACCTGGTCTGTGTGTT...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTAGCGCCACCATCGCGTaGCAGCACTTGGACAGGATG +
Preference number: 4 (lower is better)
Translates to: WDPAFQKGHQELFLKHRASATIA*QHLDRM
Trigger: CATCCTGTCCAAGTGCTGCCACGCGATGGTGGCGCT...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275884.10
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTCGCAGCTCCCGCTCCTaGATGAAGCCCCGAAACATC +
Preference number: 4 (lower is better)
Translates to: WDPAFQKGHQELFLKHRARSSRS*MKPRNI
Trigger: GATGTTTCGGGGCTTCATCCAGGAGCGGGAGCTGCG...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTGTTTCCAGATACTCTTaGGCTCGGACCTCAAACAGA +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLVSRYS*ARTSNR
Trigger: TCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAAC...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACGCTCGCCCGACGTCAGGAACAAAGAGTAGTGTCCCACAATCTCCACGAAGAACGCACCGTGACAACCTaGGACCCAGCCTTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: TLARRQEQRVVSHNLHEERTVTT*DPAFQK
Trigger: TTTCTGAAAGGCTGGGTCCCAGGTTGTCACGGTGCG...TTCTTCGTGGAGATTGTGGGACACTACTCTTTGTTCCTGACGTCGGGCGAGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR TCA 90 bp AAGAAGCGGACAAAGGCTTCAGACACCACCTCGTTCAAGGGGCTGGACTCTGGATTAGCCTCTGTGACCTaGGTTCTCACCCCATCACTA +
Preference number: 4 (lower is better)
Translates to: KKRTKASDTTSFKGLDSGLASVT*VLTPSL
Trigger: TAGTGATGGGGTGAGAACTCAGGTCACAGAGGCTAA...TCCAGAGTCCAGCCCCTTGAACGAGGTGGTGTCTGAAGCCTTTGTCCGCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR TCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTACCAGGGCCTTCTGCATaGACCTTTCCTGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLPGPSA*TFPVLH
Trigger: GTGGAGGACAGGAAAGGTTCATGCAGAAGGCCCTGG...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCAGAGTGGAGGGAGGGCTaGTTTTGGAAGGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSEWREG*FWKGTQ
Trigger: CTGGGTCCCCTTCCAAAATCAGCCCTCCCTCCACTC...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGACCAGGCGCTGGCTGTaGGCTTTCAGCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SLSQKGLLFNARRSPALQTRRWL*AFSFSS
Trigger: AGAGGAGAAGCTGAAAGCTCACAGCCAGCGCCTGGT...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTACCAGGCGCTGGCTGTaGGCTTTCAGCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: WDPAFQKGHQELFLKHRATRRWL*AFSFSS
Trigger: AGAGGAGAAGCTGAAAGCTCACAGCCAGCGCCTGGT...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATGAGGGAACTGTTGGGTaGGTTCTGGCACGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHEGTVG*VLARRQ
Trigger: CTGCCTACGTGCCAGAACTCACCCAACAGTTCCCTC...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp TTGCCTAGTCCCTTCAGGAACTTATTGACACCGCTGTGCTCTCCACTGGGGAGTAAGCCCCGAAACATCTaGGTCTCCATGAAGACCTCC +
Preference number: 4 (lower is better)
Translates to: LPSPFRNLLTPLCSPLGSKPRNI*VSMKTS
Trigger: GGAGGTCTTCATGGAGACTCAGATGTTTCGGGGCTT...ACTCCCCAGTGGAGAGCACAGCGGTGTCAATAAGTTCCTGAAGGGACTAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR TCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATAATCTCTTGACCTTGTaGTCCACCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHNLLTL*STRLGL
Trigger: GAGGCCGAGGCGGGTGGATCACAAGGTCAAGAGATT...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCAGCTTCTTCCCAGCCCTaGTGGCTTCTGCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSASSQP*WLLQLG
Trigger: ACCCAGCTGCAGAAGCCAGCAGGGCTGGGAAGAAGC...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGATGTTGAGGGACTTGTaGCGGGGTCTGGCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: SLSQKGLLFNARRSPALQMLRDL*RGLALA
Trigger: TGCCAGAGCCAGACCCCGGCACAAGTCCCTCAACAT...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp GAACTGTTTTTAAAGCATAGGGCTGCACTAGGAGGAAGTTTTCCCTTGAGGCTGGGCTGGCTTAGGTCTTaGCCCGGCTCTGGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: ELFLKHRAALGGSFPLRLGWLRS*PGSGSC
Trigger: ACAGGACCCAGAGCCGGGGCAAGACCTAAGCCAGCC...CAGCCTCAAGGGAAAACTTCCTCCTAGTGCAGCCCTATGCTTTAAAAACAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp GGACAGCCTCTTCACCCGTTTCTTTCCTCTCCGGACCTCATAAATGGCGTTGATACCAGTCCACCCTGCTaGTCTCAGAGGAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: GQPLHPFLSSPDLINGVDTSPPC*SQRKTA
Trigger: TGCAGTCTTCCTCTGAGAGCAGCAGGGTGGACTGGT...ATCAACGCCATTTATGAGGTCCGGAGAGGAAAGAAACGGGTGAAGAGGCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475837.1
CDS-3UTR GCA 90 bp CACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTTCTTTCTCTTCTTCCTaGCGTTCTGTGGGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: HQNNPFACRRHAWSRAPFSFSSS*RSVGLQ
Trigger: TTGGAGACCCACAGAACGGCAGGAAGAAGAGAAAGA...AAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGGAAGGCGCTTCCCTTTaGCTCCAGGCAGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: SLSQKGLLFNARRSPALQEGASL*LQAAVF
Trigger: GAAGACTGCTGCCTGGAGGCAAAGGGAAGCGCCTTC...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp CACTGGGGAGTGTTTCCAGATACTCTTGGGCTCGGACCTCAAACAGACCTTTGGCCAGGCGGCTCACAATaGAGTAAACTTCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: HWGVFPDTLGLGPQTDLWPGGSQ*SKLQEG
Trigger: GCCTTCCTGAAGTTTACTGCATTGTGAGCCGCCTGG...CCAAAGGTCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAACACTCCCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR GCA 90 bp CAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGATGCTGAGCTTGTCTaGAATGAAGATGACCCTCCT +
Preference number: 4 (lower is better)
Translates to: QNNPFACRRHAWSRAPFLDAELV*NEDDPP
Trigger: AGGAGGGTCATCTTCATTGCAGACAAGCTCAGCATC...CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275884.10
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATTGCCCTTGGCCGGCCTaGACACTGTCATCATGTCAG +
Preference number: 4 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHCPWPA*TLSSCQ
Trigger: CTGACATGATGACAGTGTGCAGGCCGGCCAAGGGCA...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGGTCACCAGGCTGGAGTaGAGTGGCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SLSQKGLLFNARRSPALQVTRLE*SGMISA
Trigger: AGCCGAGATCATGCCACTGCACTCCAGCCTGGTGAC...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTCTCTAGGAATGGAATaGAGGACTAAAGTGGATGCC +
Preference number: 4 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPSLGME*RTKVDA
Trigger: GGCATCCACTTTAGTCCTCCATTCCATTCCTAGAGA...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGTCTCTAGGAATGGAATaGAGGACTAAAGTGGATGCC +
Preference number: 4 (lower is better)
Translates to: KQPICMSATRLVSGSLSGSLGME*RTKVDA
Trigger: GGCATCCACTTTAGTCCTCCATTCCATTCCTAGAGA...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCAGAGGGGTGGACCCTCTaGCTGACTTCTGAGCCACTC +
Preference number: 4 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSEGWTL*LTSEPL
Trigger: GAGTGGCTCAGAAGTCAGCCAGAGGGTCCACCCCTC...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp ACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCCTTCCTGCCGTTCTGTaGGTCTCCAAGGTTAAAGAA +
Preference number: 4 (lower is better)
Translates to: TKTTHLHVGDTPGLGLPFLPAVL*VSKVKE
Trigger: TTCTTTAACCTTGGAGACCCACAGAACGGCAGGAAG...GAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTCGCAACACCAGCTTaGGTATCTTTCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPFATPA*VSFSSS
Trigger: GGAAGAAGAGAAAGATACCCAAGCTGGTGTTGCGAA...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTTCGCAACACCAGCTTaGGTATCTTTCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLFATPA*VSFSSS
Trigger: GGAAGAAGAGAAAGATACCCAAGCTGGTGTTGCGAA...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CCTGAGTTGCTCTCCATTGACTGGGACAGCCTCTTCACCCGTTTCTTTCCTCTCTTGCTCTCCATTGACTaGGACAGCCTCTTCACCCGT +
Preference number: 4 (lower is better)
Translates to: PELLSIDWDSLFTRFFPLLLSID*DSLFTR
Trigger: ACGGGTGAAGAGGCTGTCCCAGTCAATGGAGAGCAA...GAGAGGAAAGAAACGGGTGAAGAGGCTGTCCCAGTCAATGGAGAGCAACTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475837.1
CDS-3UTR CCA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTCCTCAAACAGACCTTTaGCATCCTGCCGGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: WDPAFQKGHQELFLKHRAPQTDL*HPAGAA
Trigger: AGCTGCGCCGGCAGGATGCCAAAGGTCTGTTTGAGG...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGTTTCCAGATACTCTTaGGCTCGGACCTCAAACAGA +
Preference number: 4 (lower is better)
Translates to: QNNPFACRRHAWSRAPFLVSRYS*ARTSNR
Trigger: TCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAAC...CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGTTTCCAGATACTCTTaGGCTCGGACCTCAAACAGA +
Preference number: 4 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWVSRYS*ARTSNR
Trigger: TCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAAC...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCATTTTCAGTCTGGCTGTaGCTGCCCTTGGCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSFSVWL*LPLAGL
Trigger: CAGGCCGGCCAAGGGCAGCCACAGCCAGACTGAAAA...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTACTCAGGTTTTCAGTCTaGCTGTGGCTGCCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLLRFSV*LWLPLA
Trigger: GGCCAAGGGCAGCCACAGCCAGACTGAAAACCTGAG...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTACCATGTTGCACAGGCTaGCCTCGAACTCCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLPCCTG*PRTPGL
Trigger: GAGACCAGGAGTTCGAGGCCAGCCTGTGCAACATGG...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp CACTGGGGAGTGTTTCCAGATACTCTTGGGCTCGGACCTCAAACAGACCTTTGGCTGAAGCCTGACTCCTaGTCAGTCTCTAGGAATGGA +
Preference number: 4 (lower is better)
Translates to: HWGVFPDTLGLGPQTDLWLKPDS*SVSRNG
Trigger: TCCATTCCTAGAGACTGATCAGGAGTCAGGCTTCAG...CCAAAGGTCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAACACTCCCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR TCA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGCCTGCTCGAGTTTCTTaGCCTGCTTCAGCACGGAGA +
Preference number: 4 (lower is better)
Translates to: SLSQKGLLFNARRSPALQPARVS*PASARR
Trigger: TCTCCGTGCTGAAGCAGGTCAAGAAACTCGAGCAGG...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp CCTGAGTTGCTCTCCATTGACTGGGACAGCCTCTTCACCCGTTTCTTTCCTCTCACAATGACTGCTTGGTaGGTGTGTCAGGGATGGAAG +
Preference number: 4 (lower is better)
Translates to: PELLSIDWDSLFTRFFPLTMTAW*VCQGWK
Trigger: CTTCCATCCCTGACACACTCACCAAGCAGTCATTGT...GAGAGGAAAGAAACGGGTGAAGAGGCTGTCCCAGTCAATGGAGAGCAACTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475837.1
CDS-3UTR TCA 90 bp CCTGAGTTGCTCTCCATTGACTGGGACAGCCTCTTCACCCGTTTCTTTCCTCTCAGCAGGTTTGGACAATaGCTGCTTGGTGAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: PELLSIDWDSLFTRFFPLSRFGQ*LLGECV
Trigger: GACACACTCACCAAGCAGTCATTGTCCAAACCTGCT...GAGAGGAAAGAAACGGGTGAAGAGGCTGTCCCAGTCAATGGAGAGCAACTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475837.1
CDS-3UTR TCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTATCTCCTGGTACTCGATaGGTTCCCGGGCAAGTGATG +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLSPGTR*VPGQVM
Trigger: CATCACTTGCCCGGGAACTCATCGAGTACCAGGAGA...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp GTTTCCAGATACTCTTGGGCTCGGACCTCAAACAGACCTTTGGCATCCTGCCGGCTCATCCAAGATCCTTaGAAAGAGGCTGAAGCATCC +
Preference number: 4 (lower is better)
Translates to: VSRYSWARTSNRPLASCRLIQDP*KEAEAS
Trigger: GGATGCTTCAGCCTCTTTTCAAGGATCTTGGATGAG...CCGGCAGGATGCCAAAGGTCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR TCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTACTTCTCATGAGTGGCTaGACCAGGGCAGGAGAGATG +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLLLMSG*TRAGEM
Trigger: CATCTCTCCTGCCCTGGTTCAGCCACTCATGAGAAG...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp GAACTGTTTTTAAAGCATAGGGCTGCACTAGGAGGAAGTTTTCCCTTGAGGCTGGCTTCTTCCCAGCCCTaGTGGCTTCTGCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: ELFLKHRAALGGSFPLRLASSQP*WLLQLG
Trigger: ACCCAGCTGCAGAAGCCAGCAGGGCTGGGAAGAAGC...CAGCCTCAAGGGAAAACTTCCTCCTAGTGCAGCCCTATGCTTTAAAAACAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CACTGGGGAGTGTTTCCAGATACTCTTGGGCTCGGACCTCAAACAGACCTTTGGTCCCCCGACGTTCACTaGTCCTTTATTCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: HWGVFPDTLGLGPQTDLWSPDVH*SFIPLL
Trigger: AAGGAGAGGAATAAAGGAGCAGTGAACGTCGGGGGA...CCAAAGGTCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAACACTCCCCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR GCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGTCCCAGGGCCTTCTaGATGAACCTTTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLGPRAF*MNLSCP
Trigger: AGGACAGGAAAGGTTCATGCAGAAGGCCCTGGGACC...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATACCAGTCCACCCTGCTaGTCTCAGAGGAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHTSPPC*SQRKTA
Trigger: TGCAGTCTTCCTCTGAGAGCAGCAGGGTGGACTGGT...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp CTTTTCCTGAGTTGCTCTCCATTGACTGGGACAGCCTCTTCACCCGTTTCTTTCCGTACCAGTCCACCCTaGTGCTCTCAGAGGAAGACT +
Preference number: 4 (lower is better)
Translates to: LFLSCSPLTGTASSPVSFRTSPP*CSQRKT
Trigger: AGTCTTCCTCTGAGAGCAGCAGGGTGGACTGGTACG...GAAAGAAACGGGTGAAGAGGCTGTCCCAGTCAATGGAGAGCAACTCAGGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475837.1
CDS-3UTR GCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTACGTACCAGTCCACCCTaGTGCTCTCAGAGGAAGACT +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLRTSPP*CSQRKT
Trigger: AGTCTTCCTCTGAGAGCAGCAGGGTGGACTGGTACG...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp ACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTCACTTTTCCTGAGTTaGTCTCCATTGACTGGGACA +
Preference number: 4 (lower is better)
Translates to: TKTTHLHVGDTPGLGLPFSLFLS*SPLTGT
Trigger: TGTCCCAGTCAATGGAGAGCAACTCAGGAAAAGTGA...GAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGTCACTTTTCCTGAGTTaGTCTCCATTGACTGGGACA +
Preference number: 4 (lower is better)
Translates to: QNNPFACRRHAWSRAPFLSLFLS*SPLTGT
Trigger: TGTCCCAGTCAATGGAGAGCAACTCAGGAAAAGTGA...CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ACGCTCGCCCGACGTCAGGAACAAAGAGTAGTGTCCCACAATCTCCACGAAGAAAAGTACTCGAAGAGCTaGCTCTCCTGGTACTCGATG +
Preference number: 4 (lower is better)
Translates to: TLARRQEQRVVSHNLHEEKYSKS*LSWYSM
Trigger: CATCGAGTACCAGGAGAGGCAGCTCTTCGAGTACTT...TTCTTCGTGGAGATTGTGGGACACTACTCTTTGTTCCTGACGTCGGGCGAGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR GCA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGAGTAACCGAACCTTCTaGTCCCATCTTCTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWSNRTF*SHLLQL
Trigger: TAACTGGAGAAGATGGGAGCAGAAGGTTCGGTTACT...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp GTTTCCAGATACTCTTGGGCTCGGACCTCAAACAGACCTTTGGCATCCTGCCGGTGTGCTGAGCTTGTCTaGAATGAAGATGACCCTCCT +
Preference number: 4 (lower is better)
Translates to: VSRYSWARTSNRPLASCRCAELV*NEDDPP
Trigger: AGGAGGGTCATCTTCATTGCAGACAAGCTCAGCACA...CCGGCAGGATGCCAAAGGTCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CCA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGAATGGAGGACTAAAGTaGATGCCTTCGAGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWNGGLK*MPSRVF
Trigger: AAAGACCCTCGAAGGCATCCACTTTAGTCCTCCATT...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275884.10
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGTCTCTAGGAATGGAATaGAGGACTAAAGTGGATGCC +
Preference number: 4 (lower is better)
Translates to: QNNPFACRRHAWSRAPFLSLGME*RTKVDA
Trigger: GGCATCCACTTTAGTCCTCCATTCCATTCCTAGAGA...CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTATCTGGCTCTGGCAGATaGGCAAGGGTTCTGAACACC +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLSGSGR*ARVLNT
Trigger: GGTGTTCAGAACCCTTGCCCATCTGCCAGAGCCAGA...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTATGCTGGGTGCAGGAGTaGGCACCTCTTTCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLCWVQE*APLSSL
Trigger: AAGGGAAGAAAGAGGTGCCCACTCCTGCACCCAGCA...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp GAACTGTTTTTAAAGCATAGGGCTGCACTAGGAGGAAGTTTTCCCTTGAGGCTGCAAGTCCCTGGTAACTaGGGATCCAGCCCTGCCGAC +
Preference number: 4 (lower is better)
Translates to: ELFLKHRAALGGSFPLRLQVPGN*GSSPAD
Trigger: GTCGGCAGGGCTGGATCCCCAGTTACCAGGGACTTG...CAGCCTCAAGGGAAAACTTCCTCCTAGTGCAGCCCTATGCTTTAAAAACAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCAGGTTCTCAGGAAGGGTaGACCCTGCCTCTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSGSQEG*TLPLPC
Trigger: ACAAGGCAGAGGCAGGGTCCACCCTTCCTGAGAACC...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTACGTTCTCCGGGGTTTTaGCAGAGGGTTGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLRSPGF*QRVDEG
Trigger: CCCTTCATCAACCCTCTGCCAAAACCCCGGAGAACG...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTAAGAGCTGCCTCTCCTaGTACTCGATGAGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: WDPAFQKGHQELFLKHRAKSCLS*YSMSSR
Trigger: CCGGGAACTCATCGAGTACCAGGAGAGGCAGCTCTT...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAAAGAGCTGCCTCTCCTaGTACTCGATGAGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLKSCLS*YSMSSR
Trigger: CCGGGAACTCATCGAGTACCAGGAGAGGCAGCTCTT...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp GAACTGTTTTTAAAGCATAGGGCTGCACTAGGAGGAAGTTTTCCCTTGAGGCTGCGCAGCTCCCGCTCCTaGATGAAGCCCCGAAACATC +
Preference number: 4 (lower is better)
Translates to: ELFLKHRAALGGSFPLRLRSSRS*MKPRNI
Trigger: GATGTTTCGGGGCTTCATCCAGGAGCGGGAGCTGCG...CAGCCTCAAGGGAAAACTTCCTCCTAGTGCAGCCCTATGCTTTAAAAACAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTTTCTTGACTCTAGCGTaGGGTTGTGGAGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: WDPAFQKGHQELFLKHRAFLTLA*GCGGLP
Trigger: TGGAAGGCCTCCACAACCTCACGCTAGAGTCAAGAA...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATTTCTTGACTCTAGCGTaGGGTTGTGGAGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHFLTLA*GCGGLP
Trigger: TGGAAGGCCTCCACAACCTCACGCTAGAGTCAAGAA...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATTCTTGTCCTTTATGTTaGGGGACTTGTGCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHSCPLC*GTCAGV
Trigger: GACCCCGGCACAAGTCCCTCAACATAAAGGACAAGA...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTGAGAGGGGATCGTTCTaGAAGCGTAGCTTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: WDPAFQKGHQELFLKHRAERGSF*KRSLPS
Trigger: ACTTGGCAAGCTACGCTTTCAGAACGATCCCCTCTC...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGCTTCTCCGGCATGTTTaGACGTTCTCCGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: SLSQKGLLFNARRSPALQLLRHV*TFSGVL
Trigger: CAAAACCCCGGAGAACGTTCAAACATGCCGGAGAAG...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp GGACAGCCTCTTCACCCGTTTCTTTCCTCTCCGGACCTCATAAATGGCGTTGATCCTCATAAATGGCGTTaGTTCGCAACACCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GQPLHPFLSSPDLINGVDPHKWR*FATPAW
Trigger: CCAAGCTGGTGTTGCGAATCAACGCCATTTATGAGG...ATCAACGCCATTTATGAGGTCCGGAGAGGAAAGAAACGGGTGAAGAGGCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475837.1
CDS-3UTR TCA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTCCTTCAGGAACTTATTaGCACCGCTGTGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: WDPAFQKGHQELFLKHRAPSGTY*HRCALH
Trigger: GTGGAGAGCACAGCGGTGTCAATAAGTTCCTGAAGG...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAATGGTCTCAATCTCTTaGCCTTGTGATCCACCCGCC +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLMVSIS*PCDPPA
Trigger: GGCGGGTGGATCACAAGGTCAAGAGATTGAGACCAT...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGTCTGAAAGCGTAGCTTaGCAAGTCTTGGCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: SLSQKGLLFNARRSPALQSESVA*QVLALG
Trigger: GCCGAGAGCCAAGACTTGGCAAGCTACGCTTTCAGA...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTCCAGGCGGCTCACAATaGAGTAAACTTCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: WDPAFQKGHQELFLKHRAPGGSQ*SKLQEG
Trigger: GCCTTCCTGAAGTTTACTGCATTGTGAGCCGCCTGG...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTGAAATTTCATTTTATTaGCTAGTCCCTTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: THLHVGDTPGLGLPFWGCEISFY*LVPSGT
Trigger: AGTTCCTGAAGGGACTAGGCAATAAAATGAAATTTC...ACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTATTCAATCGATTCCCGTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLFNRFP*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCACGGGAATCGATTGAA...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATGAGATCTCAGCTCACTaGAATGTCCACCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHEISAH*NVHLPG
Trigger: ACCTGGGAGGTGGACATTGCAGTGAGCTGAGATCTC...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATTTGCCCAAGCTGGAGTaGAGTGGTGAGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHLPKLE*SGEISA
Trigger: AGCTGAGATCTCACCACTGCACTCCAGCTTGGGCAA...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTATTGCTCTCCATTGACTaGGACAGCCTCTTCACCCGT +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLLLSID*DSLFTR
Trigger: ACGGGTGAAGAGGCTGTCCCAGTCAATGGAGAGCAA...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATGACACTTCTCATGAGTaGCTGAACCAGGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHDTSHE*LNQGRR
Trigger: TCTCCTGCCCTGGTTCAGCCACTCATGAGAAGTGTC...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp GAACTGTTTTTAAAGCATAGGGCTGCACTAGGAGGAAGTTTTCCCTTGAGGCTGAAGACCTCCAGGAAGTaGCGGAGGCTCTTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ELFLKHRAALGGSFPLRLKTSRK*RRLLEE
Trigger: CTCCTCCAAGAGCCTCCGCCACTTCCTGGAGGTCTT...CAGCCTCAAGGGAAAACTTCCTCCTAGTGCAGCCCTATGCTTTAAAAACAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAATGAGCCACCGTGCCTaGCCATCCTTTATTTGTGGG +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLMSHRA*PSFICG
Trigger: CCCACAAATAAAGGATGGCCAGGCACGGTGGCTCAT...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGCTGAAGCCTGACTCCTaGTCAGTCTCTAGGAATGGA +
Preference number: 4 (lower is better)
Translates to: SLSQKGLLFNARRSPALQLKPDS*SVSRNG
Trigger: TCCATTCCTAGAGACTGATCAGGAGTCAGGCTTCAG...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTATTAGCCTCTGTGACCTaGGTTCTCACCCCATCACTA +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLLASVT*VLTPSL
Trigger: TAGTGATGGGGTGAGAACTCAGGTCACAGAGGCTAA...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTTTAGCCTCTGTGACCTaGGTTCTCACCCCATCACTA +
Preference number: 4 (lower is better)
Translates to: WDPAFQKGHQELFLKHRALASVT*VLTPSL
Trigger: TAGTGATGGGGTGAGAACTCAGGTCACAGAGGCTAA...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCAGAGAGGGGATCGTTCTaGAAGCGTAGCTTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSERGSF*KRSLPS
Trigger: ACTTGGCAAGCTACGCTTTCAGAACGATCCCCTCTC...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGTTCTTTTCTCTTTCCTaGAGCCGATGCCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SLSQKGLLFNARRSPALQFFSLS*SRCQAS
Trigger: GGAAGCCTGGCATCGGCTTCAGGAAAGAGAAAAGAA...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAACAATGACTGCTTGGTaGGTGTGTCAGGGATGGAAG +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLTMTAW*VCQGWK
Trigger: CTTCCATCCCTGACACACTCACCAAGCAGTCATTGT...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATAGCAGGTTTGGACAATaGCTGCTTGGTGAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHSRFGQ*LLGECV
Trigger: GACACACTCACCAAGCAGTCATTGTCCAAACCTGCT...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTACCTCATAAATGGCGTTaGTTCGCAACACCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLPHKWR*FATPAW
Trigger: CCAAGCTGGTGTTGCGAATCAACGCCATTTATGAGG...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGAGAATGTTTCACTGGTaGACTGCTGGACAGGAACCC +
Preference number: 4 (lower is better)
Translates to: SLSQKGLLFNARRSPALQRMFHW*TAGQEP
Trigger: GGGTTCCTGTCCAGCAGTTCACCAGTGAAACATTCT...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGCTGGCAGGAAGTTCTTaGCAAGGATGGTTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: SLSQKGLLFNARRSPALQLAGSS*QGWFCP
Trigger: TGGGCAAAACCATCCTTGTCAAGAACTTCCTGCCAG...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTCTGGCAGGAAGTTCTTaGCAAGGATGGTTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: WDPAFQKGHQELFLKHRALAGSS*QGWFCP
Trigger: TGGGCAAAACCATCCTTGTCAAGAACTTCCTGCCAG...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGATCACCTCAGTTCCTaGACCTGGCAGGAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLDHLSS*TWQEVL
Trigger: AAGAACTTCCTGCCAGGTTCAGGAACTGAGGTGATC...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGTCCCCCGACGTTCACTaGTCCTTTATTCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SLSQKGLLFNARRSPALQSPDVH*SFIPLL
Trigger: AAGGAGAGGAATAAAGGAGCAGTGAACGTCGGGGGA...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCATCGAGTTTCTTGACCTaGTTCAGCACGGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSSSFLT*FSTERG
Trigger: TCCCCTCTCCGTGCTGAAGCAGGTCAAGAAACTCGA...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp GAACTGTTTTTAAAGCATAGGGCTGCACTAGGAGGAAGTTTTCCCTTGAGGCTGGGTCCCAGGGCCTTCTaGATGAACCTTTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: ELFLKHRAALGGSFPLRLGPRAF*MNLSCP
Trigger: AGGACAGGAAAGGTTCATGCAGAAGGCCCTGGGACC...CAGCCTCAAGGGAAAACTTCCTCCTAGTGCAGCCCTATGCTTTAAAAACAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATGGACTTTCTGTGGTCTaGACTGGATTTCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHGLSVV*TGFLSP
Trigger: GGGAGACAGAAATCCAGTGCAGACCACAGAAAGTCC...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTGGACTTTCTGTGGTCTaGACTGGATTTCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: WDPAFQKGHQELFLKHRAGLSVV*TGFLSP
Trigger: GGGAGACAGAAATCCAGTGCAGACCACAGAAAGTCC...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp CACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTCTCAGAGGAAGACTaGAGTAAATCTTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: HQNNPFACRRHAWSRAPFLSEED*SKSSNS
Trigger: TGAGTTTGAAGATTTACTGCAGTCTTCCTCTGAGAG...AAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp GGACAGCCTCTTCACCCGTTTCTTTCCTCTCCGGACCTCATAAATGGCGTTGATTCTTTCTCTTCTTCCTaGCGTTCTGTGGGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: GQPLHPFLSSPDLINGVDSFSSS*RSVGLQ
Trigger: TTGGAGACCCACAGAACGGCAGGAAGAAGAGAAAGA...ATCAACGCCATTTATGAGGTCCGGAGAGGAAAGAAACGGGTGAAGAGGCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475837.1
CDS-3UTR GCA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTCCGGCCTGCTTCTTGTaGAAAGACACAACCACAAAG +
Preference number: 4 (lower is better)
Translates to: WDPAFQKGHQELFLKHRAPACFL*KDTTTK
Trigger: CTTTGTGGTTGTGTCTTTGCACAAGAAGCAGGCCGG...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTACCGGCCTGCTTCTTGTaGAAAGACACAACCACAAAG +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLPACFL*KDTTTK
Trigger: CTTTGTGGTTGTGTCTTTGCACAAGAAGCAGGCCGG...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGTTTCACTGGTGAACTaGTGGACAGGAACCCAATCC +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLVSLVN*WTGTQS
Trigger: GGATTGGGTTCCTGTCCAGCAGTTCACCAGTGAAAC...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCAGGCGGCTCACAATaGAGTAAACTTCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSPGGSQ*SKLQEG
Trigger: GCCTTCCTGAAGTTTACTGCATTGTGAGCCGCCTGG...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCATTCTGTGGTCTGCACTaGATTTCTGTCTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSFCGLH*ISVSRS
Trigger: GGACCGGGAGACAGAAATCCAGTGCAGACCACAGAA...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp GAACTGTTTTTAAAGCATAGGGCTGCACTAGGAGGAAGTTTTCCCTTGAGGCTGAAGAGCTGCCTCTCCTaGTACTCGATGAGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: ELFLKHRAALGGSFPLRLKSCLS*YSMSSR
Trigger: CCGGGAACTCATCGAGTACCAGGAGAGGCAGCTCTT...CAGCCTCAAGGGAAAACTTCCTCCTAGTGCAGCCCTATGCTTTAAAAACAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATGGAATGGCCTTCAGTTaGTCCTCAGCTTCTCTCATG +
Preference number: 4 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHGMAFS*SSASLM
Trigger: CATGAGAGAAGCTGAGGACCAACTGAAGGCCATTCC...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATAACAGAACTGGGGAATaGCCTTCAGTTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHNRTGE*PSVGPQ
Trigger: CTGAGGACCAACTGAAGGCCATTCCCCAGTTCTGTT...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp GAACTGTTTTTAAAGCATAGGGCTGCACTAGGAGGAAGTTTTCCCTTGAGGCTGTCTTGTCCTTTATGTTaGGGGACTTGTGCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: ELFLKHRAALGGSFPLRLSCPLC*GTCAGV
Trigger: GACCCCGGCACAAGTCCCTCAACATAAAGGACAAGA...CAGCCTCAAGGGAAAACTTCCTCCTAGTGCAGCCCTATGCTTTAAAAACAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp GAACTGTTTTTAAAGCATAGGGCTGCACTAGGAGGAAGTTTTCCCTTGAGGCTGGAGAGGGGATCGTTCTaGAAGCGTAGCTTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: ELFLKHRAALGGSFPLRLERGSF*KRSLPS
Trigger: ACTTGGCAAGCTACGCTTTCAGAACGATCCCCTCTC...CAGCCTCAAGGGAAAACTTCCTCCTAGTGCAGCCCTATGCTTTAAAAACAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATCTCATCCAAGATCCTTaGAAAGAGGCTGAAGCATCC +
Preference number: 4 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHLIQDP*KEAEAS
Trigger: GGATGCTTCAGCCTCTTTTCAAGGATCTTGGATGAG...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGTTGGACCTTCCACCTTaGCCTTGTCAGCCAATTTGT +
Preference number: 4 (lower is better)
Translates to: SLSQKGLLFNARRSPALQLDLPP*PCQPIC
Trigger: ACAAATTGGCTGACAAGGTCAAGGTGGAAGGTCCAA...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCATCCTTCAAAGCCTaGTCGAGTTTCTTGACCTGC +
Preference number: 4 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSPSFKA*SSFLTC
Trigger: GCAGGTCAAGAAACTCGAGCAGGCTTTGAAGGATGG...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATTCTTTCTCTTCTTCCTaGCGTTCTGTGGGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHSFSSS*RSVGLQ
Trigger: TTGGAGACCCACAGAACGGCAGGAAGAAGAGAAAGA...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCAAAGTACTCGAAGAGCTaGCTCTCCTGGTACTCGATG +
Preference number: 4 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSKYSKS*LSWYSM
Trigger: CATCGAGTACCAGGAGAGGCAGCTCTTCGAGTACTT...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTGAAATTTCATTTTATTaGCTAGTCCCTTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: PPKQPICMSATRLVSGSLEISFY*LVPSGT
Trigger: AGTTCCTGAAGGGACTAGGCAATAAAATGAAATTTC...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGTACCTGAGCTTGTCTaGAATGAAGATGACCCTCCT +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLVPELV*NEDDPP
Trigger: AGGAGGGTCATCTTCATTGCAGACAAGCTCAGGTAC...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATGGAATGTCATTCTGTTaGTCAGGCTGGAGTGCAATG +
Preference number: 4 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHGMSFC*SGWSAM
Trigger: CATTGCACTCCAGCCTGAGCAACAGAATGACATTCC...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTTGTGCTCTCTGTTCCTaGCCTCATTCCATTCTTAGC +
Preference number: 4 (lower is better)
Translates to: WDPAFQKGHQELFLKHRACALCS*PHSILS
Trigger: GCTAAGAATGGAATGAGGCCAGGAACAGAGAGCACA...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGTGTGCTCTCTGTTCCTaGCCTCATTCCATTCTTAGC +
Preference number: 4 (lower is better)
Translates to: SLSQKGLLFNARRSPALQCALCS*PHSILS
Trigger: GCTAAGAATGGAATGAGGCCAGGAACAGAGAGCACA...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp GAACTGTTTTTAAAGCATAGGGCTGCACTAGGAGGAAGTTTTCCCTTGAGGCTGTTCTGTGGTCTGCACTaGATTTCTGTCTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: ELFLKHRAALGGSFPLRLFCGLH*ISVSRS
Trigger: GGACCGGGAGACAGAAATCCAGTGCAGACCACAGAA...CAGCCTCAAGGGAAAACTTCCTCCTAGTGCAGCCCTATGCTTTAAAAACAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CCTCTTCACCCGTTTCTTTCCTCTCCGGACCTCATAAATGGCGTTGATTCGCAACTTCCTGCCGTTCTGTaGGTCTCCAAGGTTAAAGAA +
Preference number: 4 (lower is better)
Translates to: PLHPFLSSPDLINGVDSQLPAVL*VSKVKE
Trigger: TTCTTTAACCTTGGAGACCCACAGAACGGCAGGAAG...TTGCGAATCAACGCCATTTATGAGGTCCGGAGAGGAAAGAAACGGGTGAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475837.1
CDS-3UTR CCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATCTTCCTGCCGTTCTGTaGGTCTCCAAGGTTAAAGAA +
Preference number: 4 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHLPAVL*VSKVKE
Trigger: TTCTTTAACCTTGGAGACCCACAGAACGGCAGGAAG...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp CAGCCTCTTCACCCGTTTCTTTCCTCTCCGGACCTCATAAATGGCGTTGATTCGTTCGCAACACCAGCTTaGGTATCTTTCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: QPLHPFLSSPDLINGVDSFATPA*VSFSSS
Trigger: GGAAGAAGAGAAAGATACCCAAGCTGGTGTTGCGAA...CGAATCAACGCCATTTATGAGGTCCGGAGAGGAAAGAAACGGGTGAAGAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475837.1
CDS-3UTR CCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTACAGGAACCCAATCCTTaGCATCGGGAAAACAGAACT +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLQEPNP*HRENRT
Trigger: AGTTCTGTTTTCCCGATGCCAAGGATTGGGTTCCTG...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCATCACTGGTGAACTGCTaGACAGGAACCCAATCCTTG +
Preference number: 4 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSSLVNC*TGTQSL
Trigger: CAAGGATTGGGTTCCTGTCCAGCAGTTCACCAGTGA...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGGGAGTTTCACCATGTTaGCCAGGATGGTCTCAATCT +
Preference number: 4 (lower is better)
Translates to: SLSQKGLLFNARRSPALQGVSPC*PGWSQS
Trigger: AGATTGAGACCATCCTGGCCAACATGGTGAAACTCC...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp GAACTGTTTTTAAAGCATAGGGCTGCACTAGGAGGAAGTTTTCCCTTGAGGCTGAGCAGGTTTGGACAATaGCTGCTTGGTGAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: ELFLKHRAALGGSFPLRLSRFGQ*LLGECV
Trigger: GACACACTCACCAAGCAGTCATTGTCCAAACCTGCT...CAGCCTCAAGGGAAAACTTCCTCCTAGTGCAGCCCTATGCTTTAAAAACAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp GAACTGTTTTTAAAGCATAGGGCTGCACTAGGAGGAAGTTTTCCCTTGAGGCTGAGAATGTTTCACTGGTaGACTGCTGGACAGGAACCC +
Preference number: 4 (lower is better)
Translates to: ELFLKHRAALGGSFPLRLRMFHW*TAGQEP
Trigger: GGGTTCCTGTCCAGCAGTTCACCAGTGAAACATTCT...CAGCCTCAAGGGAAAACTTCCTCCTAGTGCAGCCCTATGCTTTAAAAACAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR TCA 90 bp GAACTGTTTTTAAAGCATAGGGCTGCACTAGGAGGAAGTTTTCCCTTGAGGCTGCTGGCAGGAAGTTCTTaGCAAGGATGGTTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: ELFLKHRAALGGSFPLRLLAGSS*QGWFCP
Trigger: TGGGCAAAACCATCCTTGTCAAGAACTTCCTGCCAG...CAGCCTCAAGGGAAAACTTCCTCCTAGTGCAGCCCTATGCTTTAAAAACAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR GCA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAAGTAACCGAACCTTCTaGTCCCATCTTCTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLSNRTF*SHLLQL
Trigger: TAACTGGAGAAGATGGGAGCAGAAGGTTCGGTTACT...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTAGTAACCGAACCTTCTaGTCCCATCTTCTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: WDPAFQKGHQELFLKHRASNRTF*SHLLQL
Trigger: TAACTGGAGAAGATGGGAGCAGAAGGTTCGGTTACT...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGAATGGAGGACTAAAGTaGATGCCTTCGAGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: SLSQKGLLFNARRSPALQNGGLK*MPSRVF
Trigger: AAAGACCCTCGAAGGCATCCACTTTAGTCCTCCATT...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATTTCGCAACACCAGCTTaGGTATCTTTCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHFATPA*VSFSSS
Trigger: GGAAGAAGAGAAAGATACCCAAGCTGGTGTTGCGAA...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CCA 90 bp GAACTGTTTTTAAAGCATAGGGCTGCACTAGGAGGAAGTTTTCCCTTGAGGCTGAACAGAACTGGGGAATaGCCTTCAGTTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ELFLKHRAALGGSFPLRLNRTGE*PSVGPQ
Trigger: CTGAGGACCAACTGAAGGCCATTCCCCAGTTCTGTT...CAGCCTCAAGGGAAAACTTCCTCCTAGTGCAGCCCTATGCTTTAAAAACAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATAAGCGTGGGCCACCATaGCTGGCTAATTTTTCTATT +
Preference number: 4 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHKRGPP*LANFSI
Trigger: AATAGAAAAATTAGCCAGCCATGGTGGCCCACGCTT...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp TTCCTGAGTTGCTCTCCATTGACTGGGACAGCCTCTTCACCCGTTTCTTTCCTCCTCTCAGAGGAAGACTaGAGTAAATCTTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: FLSCSPLTGTASSPVSFLLSEED*SKSSNS
Trigger: TGAGTTTGAAGATTTACTGCAGTCTTCCTCTGAGAG...GAGGAAAGAAACGGGTGAAGAGGCTGTCCCAGTCAATGGAGAGCAACTCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475837.1
CDS-3UTR GCA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCATCACTTTTCCTGAGTTaGTCTCCATTGACTGGGACA +
Preference number: 4 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSSLFLS*SPLTGT
Trigger: TGTCCCAGTCAATGGAGAGCAACTCAGGAAAAGTGA...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp GAACTGTTTTTAAAGCATAGGGCTGCACTAGGAGGAAGTTTTCCCTTGAGGCTGGATGCTGAGCTTGTCTaGAATGAAGATGACCCTCCT +
Preference number: 4 (lower is better)
Translates to: ELFLKHRAALGGSFPLRLDAELV*NEDDPP
Trigger: AGGAGGGTCATCTTCATTGCAGACAAGCTCAGCATC...CAGCCTCAAGGGAAAACTTCCTCCTAGTGCAGCCCTATGCTTTAAAAACAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275884.10
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CCA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCATCTCTAGGAATGGAATaGAGGACTAAAGTGGATGCC +
Preference number: 4 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSSLGME*RTKVDA
Trigger: GGCATCCACTTTAGTCCTCCATTCCATTCCTAGAGA...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR TCA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGATCTTTAGTAGAGACTaGGTTTCATCATGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: SLSQKGLLFNARRSPALQIFSRD*VSSCWP
Trigger: TGGCCAACATGATGAAACTCAGTCTCTACTAAAGAT...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATCTCTCAGAGGAAGACTaGAGTAAATCTTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHLSEED*SKSSNS
Trigger: TGAGTTTGAAGATTTACTGCAGTCTTCCTCTGAGAG...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR GCA 90 bp TTGCCTAGTCCCTTCAGGAACTTATTGACACCGCTGTGCTCTCCACTGGGGAGTGAAATTTCATTTTATTaGCTAGTCCCTTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: LPSPFRNLLTPLCSPLGSEISFY*LVPSGT
Trigger: AGTTCCTGAAGGGACTAGGCAATAAAATGAAATTTC...ACTCCCCAGTGGAGAGCACAGCGGTGTCAATAAGTTCCTGAAGGGACTAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CAA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCTTGGACCTTCCACCTaGACCCTCCCCGCGGGCGGC +
Preference number: 5 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGLGPST*TLPAGG
Trigger: GCCGCCCGCGGGGAGGGTCAAGGTGGAAGGTCCAAG...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275884.10
CDS-3UTR CAA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCGTAGCTTGCCAAGTCTaGGCTCTCGGCCTCGGCCCC +
Preference number: 5 (lower is better)
Translates to: PRRLPGPHPGKSPASARSVACQV*ALGLGP
Trigger: GGGGCCGAGGCCGAGAGCCAAGACTTGGCAAGCTAC...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCGTAGCTTGCCAAGTCTaGGCTCTCGGCCTCGGCCCC +
Preference number: 5 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGVACQV*ALGLGP
Trigger: GGGGCCGAGGCCGAGAGCCAAGACTTGGCAAGCTAC...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS TCA 90 bp GGGTGGGCTCCCTGCCTTCCAGGTCCGAGGGGTGGACCCTCTGGCTaGCTTCTGAGCCACTCCCGCCTCCCAGGTTCTCAGGAAGGGTGG +
Preference number: 5 (lower is better)
Translates to: GWAPCLPGPRGGPSG*LLSHSRLPGSQEGW
Trigger: CCACCCTTCCTGAGAACCTGGGAGGCGGGAGTGGCTCAGAAGTCAGCCAGAGGGTCCACCCCTCGGACCTGGAAGGCAGGGAGCCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS TCA 90 bp CTCCCTGCCTTCCAGGTCCGAGGGGTGGACCCTCTGGCTGACTTCTaGGCCACTCCCGCCTCCCAGGTTCTCAGGAAGGGTGGACCCTGC +
Preference number: 5 (lower is better)
Translates to: LPAFQVRGVDPLADF*ATPASQVLRKGGPC
Trigger: GCAGGGTCCACCCTTCCTGAGAACCTGGGAGGCGGGAGTGGCTCAGAAGTCAGCCAGAGGGTCCACCCCTCGGACCTGGAAGGCAGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCACCTCAAACAGACCTTaGGCATCCTGCCGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLTSNRP*ASCRRS
Trigger: GCTGCGCCGGCAGGATGCCAAAGGTCTGTTTGAGGT...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp AAGCCACCGCGGCCTCCAGTTCCGCACCGTGACAACCTGGGACCCAGCCTTTCAGTAGCTTGCCAAGTCTaGGCTCTCGGCCTCGGCCCC +
Preference number: 5 (lower is better)
Translates to: KPPRPPVPHRDNLGPSLSVACQV*ALGLGP
Trigger: GGGGCCGAGGCCGAGAGCCAAGACTTGGCAAGCTAC...TGAAAGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGAGGCCGCGGTGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCGCCTGCTCGAGTTTCTaGACCTGCTTCAGCACGGAG +
Preference number: 5 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGACSSF*TCFSTE
Trigger: CTCCGTGCTGAAGCAGGTCAAGAAACTCGAGCAGGC...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCATCGCGTGGCAGCACTaGGACAGGATGCTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: CPPRRLPGPHPGKSPASAIAWQH*DRMLSL
Trigger: CAAGCTCAGCATCCTGTCCAAGTGCTGCCACGCGAT...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275884.10
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCCTGAGGAACCGGCTGTaGACGAGGTCAACCACAAGG +
Preference number: 5 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLLRNRL*TRSTTR
Trigger: CCTTGTGGTTGACCTCGTCAACAGCCGGTTCCTCAG...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCTTTATGTTGAGGGACTaGTGCCGGGGTCTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLFMLRD*CRGLAL
Trigger: CAGAGCCAGACCCCGGCACAAGTCCCTCAACATAAA...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp ATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCCTCGTAGCTTGCCAAGTCTaGGCTCTCGGCCTCGGCCCC +
Preference number: 5 (lower is better)
Translates to: ICMSATRLVSGSLSGAVLVACQV*ALGLGP
Trigger: GGGGCCGAGGCCGAGAGCCAAGACTTGGCAAGCTAC...GAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCGGTTTTGGCAGAGGGTaGATGAAGGGCTTTGTGGGG +
Preference number: 5 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGGFGRG*MKGFVG
Trigger: CCCCACAAAGCCCTTCATCAACCCTCTGCCAAAACC...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS GCA 90 bp CGGCCCCAGCTAGGATCCACTTCCCGTTCTGGCTGGCTTAGGTCTTaGCCCGGCTCTGGGTCCTGTCCCCCGACGTTCACTGCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: RPQLGSTSRSGWLRS*PGSGSCPPTFTAPL
Trigger: TAAAGGAGCAGTGAACGTCGGGGGACAGGACCCAGAGCCGGGGCAAGACCTAAGCCAGCCAGAACGGGAAGTGGATCCTAGCTGGGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000491728.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCCCTTCTCCGGCATGTTaGAACGTTCTCCGGGGTTTT +
Preference number: 5 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLPSPAC*NVLRGF
Trigger: AAAACCCCGGAGAACGTTCAAACATGCCGGAGAAGG...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp GGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGCCTTCTCCGGCATGTTaGAACGTTCTCCGGGGTTTT +
Preference number: 5 (lower is better)
Translates to: GCPPRRLPGPHPGKSPASPSPAC*NVLRGF
Trigger: AAAACCCCGGAGAACGTTCAAACATGCCGGAGAAGG...CGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCCTTCAGAGGGAACTGTaGGGTGAGTTCTGGCACGTA +
Preference number: 5 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLLQREL*GEFWHV
Trigger: TACGTGCCAGAACTCACCCAACAGTTCCCTCTGAAG...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCTTCAGAGGGAACTGTaGGGTGAGTTCTGGCACGTA +
Preference number: 5 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGLQREL*GEFWHV
Trigger: TACGTGCCAGAACTCACCCAACAGTTCCCTCTGAAG...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCCTTCAGAGGGAACTGTaGGGTGAGTTCTGGCACGTA +
Preference number: 5 (lower is better)
Translates to: CPPRRLPGPHPGKSPASALQREL*GEFWHV
Trigger: TACGTGCCAGAACTCACCCAACAGTTCCCTCTGAAG...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCCCTTCAGGAACTTATaGACACCGCTGTGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGPFRNL*TPLCSP
Trigger: TGGAGAGCACAGCGGTGTCAATAAGTTCCTGAAGGG...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS TCA 90 bp GCCCCTATACACGTTCTCAAGGCTCCGGTCCCAGGGCCTTCTGCATaGACCTTTCCTGTCCTCCACAAGCTCAGGGGTGGGCTCCCTGCC +
Preference number: 5 (lower is better)
Translates to: APIHVLKAPVPGPSA*TFPVLHKLRGGLPA
Trigger: GGCAGGGAGCCCACCCCTGAGCTTGTGGAGGACAGGAAAGGTTCATGCAGAAGGCCCTGGGACCGGAGCCTTGAGAACGTGTATAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS GCA 90 bp CCGAGCCCCTATACACGTTCTCAAGGCTCCGGTCCCAGGGCCTTCTaGATGAACCTTTCCTGTCCTCCACAAGCTCAGGGGTGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: PSPYTRSQGSGPRAF*MNLSCPPQAQGWAP
Trigger: GGGAGCCCACCCCTGAGCTTGTGGAGGACAGGAAAGGTTCATGCAGAAGGCCCTGGGACCGGAGCCTTGAGAACGTGTATAGGGGCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS GCA 90 bp GGGCTGGACTCTGGACCGTGCCTGCCGTCTAGGGGCCCTTCGTCCTaGTCACAAGCCAGCTCGTTCCTCTGTTCCAGAATGTGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: GLDSGPCLPSRGPSS*SQASSFLCSRMCSR
Trigger: CCTGGAACACATTCTGGAACAGAGGAACGAGCTGGCTTGTGAGCAGGACGAAGGGCCCCTAGACGGCAGGCACGGTCCAGAGTCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCATCTTGTCCTTTATGTaGAGGGACTTGTGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLILSFM*RDLCRG
Trigger: ACCCCGGCACAAGTCCCTCAACATAAAGGACAAGAT...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp AAGCCACCGCGGCCTCCAGTTCCGCACCGTGACAACCTGGGACCCAGCCTTTCAGCCTGCTCGAGTTTCTaGACCTGCTTCAGCACGGAG +
Preference number: 5 (lower is better)
Translates to: KPPRPPVPHRDNLGPSLSACSSF*TCFSTE
Trigger: CTCCGTGCTGAAGCAGGTCAAGAAACTCGAGCAGGC...TGAAAGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGAGGCCGCGGTGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCTTGGACAATGACTGCTaGGTGAGTGTGTCAGGGATG +
Preference number: 5 (lower is better)
Translates to: PRRLPGPHPGKSPASARSLDNDC*VSVSGM
Trigger: CATCCCTGACACACTCACCAAGCAGTCATTGTCCAA...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp GGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGTTGGACAATGACTGCTaGGTGAGTGTGTCAGGGATG +
Preference number: 5 (lower is better)
Translates to: GCPPRRLPGPHPGKSPASLDNDC*VSVSGM
Trigger: CATCCCTGACACACTCACCAAGCAGTCATTGTCCAA...CGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCACAGGAACCCAATCCTaGGCATCGGGAAAACAGAAC +
Preference number: 5 (lower is better)
Translates to: CPPRRLPGPHPGKSPASATGTQS*ASGKQN
Trigger: GTTCTGTTTTCCCGATGCCAAGGATTGGGTTCCTGT...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCACAGGAACCCAATCCTaGGCATCGGGAAAACAGAAC +
Preference number: 5 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGTGTQS*ASGKQN
Trigger: GTTCTGTTTTCCCGATGCCAAGGATTGGGTTCCTGT...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCTGTTTCCAGATACTCTaGGGCTCGGACCTCAAACAG +
Preference number: 5 (lower is better)
Translates to: PRRLPGPHPGKSPASARSCFQIL*GSDLKQ
Trigger: CTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAACA...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGTAGGTGTGCTGAGCTaGTCTGCAATGAAGATGACC +
Preference number: 5 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLVGVLS*SAMKMT
Trigger: GGTCATCTTCATTGCAGACAAGCTCAGCACACCTAC...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CAA 90 bp GGGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCCTTGGACCTTCCACCTaGACCTTGTCAGCCAATTTG +
Preference number: 5 (lower is better)
Translates to: GLSSQAAPRSSSREEPSLLGPST*TLSANL
Trigger: CAAATTGGCTGACAAGGTCAAGGTGGAAGGTCCAAG...GAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496613.6
CDS TCA 90 bp CTCGAAGAGCTGCCTCTCCTGGTACTCGATGAGTTCCCGGGCAAGTaGTGGGTACCGAGGCGCCTGCTTCAGCCGGGACTTCACGTTGAC +
Preference number: 5 (lower is better)
Translates to: LEELPLLVLDEFPGK*WVPRRLLQPGLHVD
Trigger: GTCAACGTGAAGTCCCGGCTGAAGCAGGCGCCTCGGTACCCATCACTTGCCCGGGAACTCATCGAGTACCAGGAGAGGCAGCTCTTCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp AAGCCACCGCGGCCTCCAGTTCCGCACCGTGACAACCTGGGACCCAGCCTTTCAGGTTTTGGCAGAGGGTaGATGAAGGGCTTTGTGGGG +
Preference number: 5 (lower is better)
Translates to: KPPRPPVPHRDNLGPSLSGFGRG*MKGFVG
Trigger: CCCCACAAAGCCCTTCATCAACCCTCTGCCAAAACC...TGAAAGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGAGGCCGCGGTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp ATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCCTCGCCCCGGCCTGCTTCTaGTGCAAAGACACAACCACA +
Preference number: 5 (lower is better)
Translates to: ICMSATRLVSGSLSGAVLAPACF*CKDTTT
Trigger: TGTGGTTGTGTCTTTGCACAAGAAGCAGGCCGGGGC...GAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp ACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTGCCCCGGCCTGCTTCTaGTGCAAAGACACAACCACA +
Preference number: 5 (lower is better)
Translates to: THLHVGDTPGLGLPFWGCAPACF*CKDTTT
Trigger: TGTGGTTGTGTCTTTGCACAAGAAGCAGGCCGGGGC...ACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS TCA 90 bp CAAGTGATGGGTACCGAGGCGCCTGCTTCAGCCGGGACTTCACGTTaGCCAGGCGCTGGCTGTGAGCTTTCAGCTTCTCCTCTGTGTCAC +
Preference number: 5 (lower is better)
Translates to: QVMGTEAPASAGTSR*PGAGCELSASPLCH
Trigger: GTGACACAGAGGAGAAGCTGAAAGCTCACAGCCAGCGCCTGGTCAACGTGAAGTCCCGGCTGAAGCAGGCGCCTCGGTACCCATCACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS GCA 90 bp CCTCCTCTCCACCGTAGAGGACGGCAGATAATCCTCCTGTCCGTCTaGTCTCCTGCTGGGTGCAGGAGTGGGCACCTCTTTCTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: PPLHRRGRQIILLSV*SPAGCRSGHLFLPF
Trigger: GAAGGGAAGAAAGAGGTGCCCACTCCTGCACCCAGCAGGAGAGCAGACGGACAGGAGGATTATCTGCCGTCCTCTACGGTGGAGAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000489552.1
ENST00000491728.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp ATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCCTCTTTATGTTGAGGGACTaGTGCCGGGGTCTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: ICMSATRLVSGSLSGAVLFMLRD*CRGLAL
Trigger: CAGAGCCAGACCCCGGCACAAGTCCCTCAACATAAA...GAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp ATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCCTCGGTTTTGGCAGAGGGTaGATGAAGGGCTTTGTGGGG +
Preference number: 5 (lower is better)
Translates to: ICMSATRLVSGSLSGAVLGFGRG*MKGFVG
Trigger: CCCCACAAAGCCCTTCATCAACCCTCTGCCAAAACC...GAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp TGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAAGGGTTCTCCTTCATaGGCGGATCTAGAATGTCTT +
Preference number: 5 (lower is better)
Translates to: CPPRRLPGPHPGKSPASAKGSPS*ADLECL
Trigger: AAGACATTCTAGATCCGCCAATGAAGGAGAACCCTT...GGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp AAGCCACCGCGGCCTCCAGTTCCGCACCGTGACAACCTGGGACCCAGCCTTTCACTGAGTTGCTCTCCATaGACTGGGACAGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: KPPRPPVPHRDNLGPSLSLSCSP*TGTASS
Trigger: TGAAGAGGCTGTCCCAGTCAATGGAGAGCAACTCAG...TGAAAGGCTGGGTCCCAGGTTGTCACGGTGCGGAACTGGAGGCCGCGGTGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp ACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTAAGTGGCGGAGGCTCTaGGAGGAGACAGCTTTGCGG +
Preference number: 5 (lower is better)
Translates to: TTKTTHLHVGDTPGLGLPKWRRL*EETALR
Trigger: CCGCAAAGCTGTCTCCTCCAAGAGCCTCCGCCACTT...AGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS TCA 90 bp TGCTCGAGTTTCTTGACCTGCTTCAGCACGGAGAGGGGATCGTTCTaGAAGCGTAGCTTGCCAAGTCTTGGCTCTCGGCCTCGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: CSSFLTCFSTERGSF*KRSLPSLGSRPRPQ
Trigger: CTGGGGCCGAGGCCGAGAGCCAAGACTTGGCAAGCTACGCTTTCAGAACGATCCCCTCTCCGTGCTGAAGCAGGTCAAGAAACTCGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS GCA 90 bp CCTGGTAACTGGGGATCCAGCCCTGCCGACCCATCCTTCAAAGCCTaGTCGAGTTTCTTGACCTGCTTCAGCACGGAGAGGGGATCGTTC +
Preference number: 5 (lower is better)
Translates to: PGNWGSSPADPSFKA*SSFLTCFSTERGSF
Trigger: GAACGATCCCCTCTCCGTGCTGAAGCAGGTCAAGAAACTCGAGCAGGCTTTGAAGGATGGGTCGGCAGGGCTGGATCCCCAGTTACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS CCA 90 bp GGGATGACTGGGGGAGCATCCTCTCTTTTGAGAACCGGGAACCTGTaGGCTCAGGCTGCGTGGCCCAGGTGTACAAAGCATACGCCAACA +
Preference number: 5 (lower is better)
Translates to: GMTGGASSLLRTGNL*AQAAWPRCTKHTPT
Trigger: TGTTGGCGTATGCTTTGTACACCTGGGCCACGCAGCCTGAGCCCACAGGTTCCCGGTTCTCAAAAGAGAGGATGCTCCCCCAGTCATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489552.1
CDS-3UTR CAA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGACTCTAGCGTGAGGTaGTGGAGGCCTTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWDSSVR*WRPSRG
Trigger: TCCCCTGGAAGGCCTCCACAACCTCACGCTAGAGTC...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp CCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCCAGAAGCTCCCATTCTGATATCTaGTCCTTTATGTTGAGGGAC +
Preference number: 5 (lower is better)
Translates to: PRRLPGPHPGKSPASARSSHSDI*SFMLRD
Trigger: GTCCCTCAACATAAAGGACAAGATATCAGAATGGGA...GCTTCTGGCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp ATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCCTCCTGAGTTGCTCTCCATaGACTGGGACAGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: ICMSATRLVSGSLSGAVLLSCSP*TGTASS
Trigger: TGAAGAGGCTGTCCCAGTCAATGGAGAGCAACTCAG...GAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp ACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTGCCCCGGCCTGCTTCTaGTGCAAAGACACAACCACA +
Preference number: 5 (lower is better)
Translates to: TTKTTHLHVGDTPGLGLPAPACF*CKDTTT
Trigger: TGTGGTTGTGTCTTTGCACAAGAAGCAGGCCGGGGC...AGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp CTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGGCGCTTCTCTCATGAACTaGAAAGACCTTTCCAACTTC +
Preference number: 5 (lower is better)
Translates to: LSSQAAPRSSSREEPSLGASLMN*KDLSNF
Trigger: GAAGTTGGAAAGGTCTTTCAAGTTCATGAGAGAAGC...GCCGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGATCGCGTGGCAGCACTaGGACAGGATGCTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: KQPICMSATRLVSGSLSGIAWQH*DRMLSL
Trigger: CAAGCTCAGCATCCTGTCCAAGTGCTGCCACGCGAT...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275884.10
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTCTGAGGAACCGGCTGTaGACGAGGTCAACCACAAGG +
Preference number: 5 (lower is better)
Translates to: PPKQPICMSATRLVSGSLLRNRL*TRSTTR
Trigger: CCTTGTGGTTGACCTCGTCAACAGCCGGTTCCTCAG...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGAAGTGGCGGAGGCTCTaGGAGGAGACAGCTTTGCGG +
Preference number: 5 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWKWRRL*EETALR
Trigger: CCGCAAAGCTGTCTCCTCCAAGAGCCTCCGCCACTT...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGACCTCAAACAGACCTTaGGCATCCTGCCGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWTSNRP*ASCRRS
Trigger: GCTGCGCCGGCAGGATGCCAAAGGTCTGTTTGAGGT...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp ACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCACCTCAAACAGACCTTaGGCATCCTGCCGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: TKTTHLHVGDTPGLGLPFTSNRP*ASCRRS
Trigger: GCTGCGCCGGCAGGATGCCAAAGGTCTGTTTGAGGT...GAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp CCTCCCGCTGCAGGGTTCTCTCCTCACGCTCGCCCGACGTCAGGAACAAAGAGTACCAAAACAACCCATTaGCATGTCGGCGACACGCCT +
Preference number: 5 (lower is better)
Translates to: PPAAGFSPHARPTSGTKSTKTTH*HVGDTP
Trigger: AGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT...ACTCTTTGTTCCTGACGTCGGGCGAGCGTGAGGAGAGAACCCTGCAGCGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS TCA 90 bp ACACAACCACAAAGTACTCGAAGAGCTGCCTCTCCTGGTACTCGATaGGTTCCCGGGCAAGTGATGGGTACCGAGGCGCCTGCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: TQPQSTRRAASPGTR*VPGQVMGTEAPASA
Trigger: GGCTGAAGCAGGCGCCTCGGTACCCATCACTTGCCCGGGAACTCATCGAGTACCAGGAGAGGCAGCTCTTCGAGTACTTTGTGGTTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS TCA 90 bp CAAGCCAGCTCGTTCCTCTGTTCCAGAATGTGTTCCAGGGCCACCTaGAGCTTCCGGGGCAGGATGGAGTCCTCATCGTCCATCTGTCTG +
Preference number: 5 (lower is better)
Translates to: QASSFLCSRMCSRAT*SFRGRMESSSSICL
Trigger: CAGACAGATGGACGATGAGGACTCCATCCTGCCCCGGAAGCTTCAGGTGGCCCTGGAACACATTCTGGAACAGAGGAACGAGCTGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS CCA 90 bp GTCCTTTATGTTGAGGGACTTGTGCCGGGGTCTGGCTCTGGCAGATaGGCAAGGGTTCTGAACACCTCTGAGCTGCTTCTTCCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: VLYVEGLVPGSGSGR*ARVLNTSELLLPSP
Trigger: AGGGCTGGGAAGAAGCAGCTCAGAGGTGTTCAGAACCCTTGCCCATCTGCCAGAGCCAGACCCCGGCACAAGTCCCTCAACATAAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000477488.1
ENST00000489552.1
ENST00000491728.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp TCTCTCCTCACGCTCGCCCGACGTCAGGAACAAAGAGTAGTGTCCCACAATCTCGACTCTAGCGTGAGGTaGTGGAGGCCTTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: SLLTLARRQEQRVVSHNLDSSVR*WRPSRG
Trigger: TCCCCTGGAAGGCCTCCACAACCTCACGCTAGAGTC...GAGATTGTGGGACACTACTCTTTGTTCCTGACGTCGGGCGAGCGTGAGGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CAA 90 bp GACACCGCTGTGCTCTCCACTGGGGAGTGTTTCCAGATACTCTTGGGCTCGGACTTTATGTTGAGGGACTaGTGCCGGGGTCTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: DTAVLSTGECFQILLGSDFMLRD*CRGLAL
Trigger: CAGAGCCAGACCCCGGCACAAGTCCCTCAACATAAA...GTCCGAGCCCAAGAGTATCTGGAAACACTCCCCAGTGGAGAGCACAGCGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CAA 90 bp ACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTTATGTTGAGGGACTaGTGCCGGGGTCTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: TTKTTHLHVGDTPGLGLPFMLRD*CRGLAL
Trigger: CAGAGCCAGACCCCGGCACAAGTCCCTCAACATAAA...AGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp TCTCCACGAAGAAGCGGACAAAGGCTTCAGACACCACCTCGTTCAAGGGGCTGGGCCTGCTCGAGTTTCTaGACCTGCTTCAGCACGGAG +
Preference number: 5 (lower is better)
Translates to: SPRRSGQRLQTPPRSRGWACSSF*TCFSTE
Trigger: CTCCGTGCTGAAGCAGGTCAAGAAACTCGAGCAGGC...CCAGCCCCTTGAACGAGGTGGTGTCTGAAGCCTTTGTCCGCTTCTTCGTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CAA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGCCTGCTCGAGTTTCTaGACCTGCTTCAGCACGGAG +
Preference number: 5 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWACSSF*TCFSTE
Trigger: CTCCGTGCTGAAGCAGGTCAAGAAACTCGAGCAGGC...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCGGTTTTGGCAGAGGGTaGATGAAGGGCTTTGTGGGG +
Preference number: 5 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPGFGRG*MKGFVG
Trigger: CCCCACAAAGCCCTTCATCAACCCTCTGCCAAAACC...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp ATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCCTCTTGGACAATGACTGCTaGGTGAGTGTGTCAGGGATG +
Preference number: 5 (lower is better)
Translates to: ICMSATRLVSGSLSGAVLLDNDC*VSVSGM
Trigger: CATCCCTGACACACTCACCAAGCAGTCATTGTCCAA...GAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp ACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTACAGGAACCCAATCCTaGGCATCGGGAAAACAGAAC +
Preference number: 5 (lower is better)
Translates to: THLHVGDTPGLGLPFWGCTGTQS*ASGKQN
Trigger: GTTCTGTTTTCCCGATGCCAAGGATTGGGTTCCTGT...ACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp CACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTATCGCGTGGCAGCACTaGGACAGGATGCTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: HQNNPFACRRHAWSRAPFIAWQH*DRMLSL
Trigger: CAAGCTCAGCATCCTGTCCAAGTGCTGCCACGCGAT...AAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275884.10
ENST00000496613.6
ENST00000537639.5
CDS TCA 90 bp GATCCAGCCCTGCCGACCCATCCTTCAAAGCCTGCTCGAGTTTCTTaGCCTGCTTCAGCACGGAGAGGGGATCGTTCTGAAAGCGTAGCT +
Preference number: 5 (lower is better)
Translates to: DPALPTHPSKPARVS*PASARRGDRSESVA
Trigger: AGCTACGCTTTCAGAACGATCCCCTCTCCGTGCTGAAGCAGGTCAAGAAACTCGAGCAGGCTTTGAAGGATGGGTCGGCAGGGCTGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS GCA 90 bp CCTTGTCAGCCAATTTGTAGCTCAGGTTTTCAGTCTGGCTGTGGCTaGCCTTGGCCGGCCTGCACACTGTCATCATGTCAGTACCGAGGG +
Preference number: 5 (lower is better)
Translates to: PCQPICSSGFQSGCG*PWPACTLSSCQYRG
Trigger: CCCTCGGTACTGACATGATGACAGTGTGCAGGCCGGCCAAGGGCAGCCACAGCCAGACTGAAAACCTGAGCTACAAATTGGCTGACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477488.1
ENST00000491728.5
ENST00000492720.5
ENST00000496613.6
CDS-3UTR CAA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCCCTTCTCCGGCATGTTaGAACGTTCTCCGGGGTTTT +
Preference number: 5 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPPSPAC*NVLRGF
Trigger: AAAACCCCGGAGAACGTTCAAACATGCCGGAGAAGG...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTCTGAGTTGCTCTCCATaGACTGGGACAGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: PPKQPICMSATRLVSGSLLSCSP*TGTASS
Trigger: TGAAGAGGCTGTCCCAGTCAATGGAGAGCAACTCAG...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCCTTCAGAGGGAACTGTaGGGTGAGTTCTGGCACGTA +
Preference number: 5 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPLQREL*GEFWHV
Trigger: TACGTGCCAGAACTCACCCAACAGTTCCCTCTGAAG...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp ACTGGGGAGTGTTTCCAGATACTCTTGGGCTCGGACCTCAAACAGACCTTTGGCAAGTGGCGGAGGCTCTaGGAGGAGACAGCTTTGCGG +
Preference number: 5 (lower is better)
Translates to: TGECFQILLGSDLKQTFGKWRRL*EETALR
Trigger: CCGCAAAGCTGTCTCCTCCAAGAGCCTCCGCCACTT...GCCAAAGGTCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAACACTCCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CAA 90 bp GGCTGTCCTCCCAGGCGGCTCCCAGGTCCTCATCCAGGGAAGAGCCCAGCCTCGAGAAATTTCATTTTATaGCCTAGTCCCTTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: GCPPRRLPGPHPGKSPASRNFIL*PSPFRN
Trigger: GTTCCTGAAGGGACTAGGCAATAAAATGAAATTTCT...CGAGGCTGGGCTCTTCCCTGGATGAGGACCTGGGAGCCGCCTGGGAGGACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS CCA 90 bp TTGTGCAAAGACACAACCACAAAGTACTCGAAGAGCTGCCTCTCCTaGTACTCGATGAGTTCCCGGGCAAGTGATGGGTACCGAGGCGCC +
Preference number: 5 (lower is better)
Translates to: LCKDTTTKYSKSCLS*YSMSSRASDGYRGA
Trigger: GGCGCCTCGGTACCCATCACTTGCCCGGGAACTCATCGAGTACCAGGAGAGGCAGCTCTTCGAGTACTTTGTGGTTGTGTCTTTGCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp GACACCGCTGTGCTCTCCACTGGGGAGTGTTTCCAGATACTCTTGGGCTCGGACATCTTGTCCTTTATGTaGAGGGACTTGTGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: DTAVLSTGECFQILLGSDILSFM*RDLCRG
Trigger: ACCCCGGCACAAGTCCCTCAACATAAAGGACAAGAT...GTCCGAGCCCAAGAGTATCTGGAAACACTCCCCAGTGGAGAGCACAGCGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CAA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCAGTAGCTTGCCAAGTCTaGGCTCTCGGCCTCGGCCCC +
Preference number: 5 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSVACQV*ALGLGP
Trigger: GGGGCCGAGGCCGAGAGCCAAGACTTGGCAAGCTAC...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CAA 90 bp ACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTAAGGGTTCTCCTTCATaGGCGGATCTAGAATGTCTT +
Preference number: 5 (lower is better)
Translates to: THLHVGDTPGLGLPFWGCKGSPS*ADLECL
Trigger: AAGACATTCTAGATCCGCCAATGAAGGAGAACCCTT...ACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp ATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTGTCCTCATTCGCAACACCAGCTaGGGTATCTTTCTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: ICMSATRLVSGSLSGAVLIRNTS*GIFLFF
Trigger: GAAGAAGAGAAAGATACCCAAGCTGGTGTTGCGAAT...GAGGACAGCCCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp CAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGCTGAGTTGCTCTCCATaGACTGGGACAGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: QNNPFACRRHAWSRAPFLLSCSP*TGTASS
Trigger: TGAAGAGGCTGTCCCAGTCAATGGAGAGCAACTCAG...CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTGACAGGATGCTGAGCTaGTCTGCAATGAAGATGACC +
Preference number: 5 (lower is better)
Translates to: PPKQPICMSATRLVSGSLDRMLS*SAMKMT
Trigger: GGTCATCTTCATTGCAGACAAGCTCAGCATCCTGTC...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275884.10
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp ACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTGACAGGATGCTGAGCTaGTCTGCAATGAAGATGACC +
Preference number: 5 (lower is better)
Translates to: TTKTTHLHVGDTPGLGLPDRMLS*SAMKMT
Trigger: GGTCATCTTCATTGCAGACAAGCTCAGCATCCTGTC...AGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275884.10
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGTGTTTCCAGATACTCTaGGGCTCGGACCTCAAACAG +
Preference number: 5 (lower is better)
Translates to: KQPICMSATRLVSGSLSGCFQIL*GSDLKQ
Trigger: CTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAACA...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp CCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTGTTTCCAGATACTCTaGGGCTCGGACCTCAAACAG +
Preference number: 5 (lower is better)
Translates to: PPKQPICMSATRLVSGSLCFQIL*GSDLKQ
Trigger: CTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAACA...AAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTGTTTCCAGATACTCTaGGGCTCGGACCTCAAACAG +
Preference number: 5 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPCFQIL*GSDLKQ
Trigger: CTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAACA...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp ACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCCCCTTCAGGAACTTATaGACACCGCTGTGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: TKTTHLHVGDTPGLGLPFPFRNL*TPLCSP
Trigger: TGGAGAGCACAGCGGTGTCAATAAGTTCCTGAAGGG...GAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGCCCTTCAGGAACTTATaGACACCGCTGTGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWPFRNL*TPLCSP
Trigger: TGGAGAGCACAGCGGTGTCAATAAGTTCCTGAAGGG...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp CAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGACCAAAACAACCCATTaGCATGTCGGCGACACGCCT +
Preference number: 5 (lower is better)
Translates to: QNNPFACRRHAWSRAPFLTKTTH*HVGDTP
Trigger: AGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT...CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGACCAAAACAACCCATTaGCATGTCGGCGACACGCCT +
Preference number: 5 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWTKTTH*HVGDTP
Trigger: AGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp AAGGCTTCAGACACCACCTCGTTCAAGGGGCTGGACTCTGGACCGTGCCTGCCGTCCCATTCTGATATCTaGTCCTTTATGTTGAGGGAC +
Preference number: 5 (lower is better)
Translates to: KASDTTSFKGLDSGPCLPSHSDI*SFMLRD
Trigger: GTCCCTCAACATAAAGGACAAGATATCAGAATGGGA...CGGCAGGCACGGTCCAGAGTCCAGCCCCTTGAACGAGGTGGTGTCTGAAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CAA 90 bp CAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGTTGGACAATGACTGCTaGGTGAGTGTGTCAGGGATG +
Preference number: 5 (lower is better)
Translates to: QNNPFACRRHAWSRAPFLLDNDC*VSVSGM
Trigger: CATCCCTGACACACTCACCAAGCAGTCATTGTCCAA...CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS GCA 90 bp GCCTGCTTCTTGTGCAAAGACACAACCACAAAGTACTCGAAGAGCTaGCTCTCCTGGTACTCGATGAGTTCCCGGGCAAGTGATGGGTAC +
Preference number: 5 (lower is better)
Translates to: ACFLCKDTTTKYSKS*LSWYSMSSRASDGY
Trigger: GTACCCATCACTTGCCCGGGAACTCATCGAGTACCAGGAGAGGCAGCTCTTCGAGTACTTTGTGGTTGTGTCTTTGCACAAGAAGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCAGACTCTAGCGTGAGGTaGTGGAGGCCTTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSDSSVR*WRPSRG
Trigger: TCCCCTGGAAGGCCTCCACAACCTCACGCTAGAGTC...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CAA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATGCCTGCTCGAGTTTCTaGACCTGCTTCAGCACGGAG +
Preference number: 5 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHACSSF*TCFSTE
Trigger: CTCCGTGCTGAAGCAGGTCAAGAAACTCGAGCAGGC...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CAA 90 bp GACACCGCTGTGCTCTCCACTGGGGAGTGTTTCCAGATACTCTTGGGCTCGGACAAGGGTTCTCCTTCATaGGCGGATCTAGAATGTCTT +
Preference number: 5 (lower is better)
Translates to: DTAVLSTGECFQILLGSDKGSPS*ADLECL
Trigger: AAGACATTCTAGATCCGCCAATGAAGGAGAACCCTT...GTCCGAGCCCAAGAGTATCTGGAAACACTCCCCAGTGGAGAGCACAGCGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS-3UTR CAA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCATTCGCAACACCAGCTaGGGTATCTTTCTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPIRNTS*GIFLFF
Trigger: GAAGAAGAGAAAGATACCCAAGCTGGTGTTGCGAAT...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGGCCCCGGCCTGCTTCTaGTGCAAAGACACAACCACA +
Preference number: 5 (lower is better)
Translates to: SLSQKGLLFNARRSPALQAPACF*CKDTTT
Trigger: TGTGGTTGTGTCTTTGCACAAGAAGCAGGCCGGGGC...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CAA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTCTGAGGAACCGGCTGTaGACGAGGTCAACCACAAGG +
Preference number: 5 (lower is better)
Translates to: WDPAFQKGHQELFLKHRALRNRL*TRSTTR
Trigger: CCTTGTGGTTGACCTCGTCAACAGCCGGTTCCTCAG...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATCTGGCCATCCTTTATTaGTGGGGGCAGGAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHLAILY*WGQEGR
Trigger: CCTTCCCTCCTGCCCCCACAAATAAAGGATGGCCAG...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CAA 90 bp GAACTGTTTTTAAAGCATAGGGCTGCACTAGGAGGAAGTTTTCCCTTGAGGCTGGACTCTAGCGTGAGGTaGTGGAGGCCTTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: ELFLKHRAALGGSFPLRLDSSVR*WRPSRG
Trigger: TCCCCTGGAAGGCCTCCACAACCTCACGCTAGAGTC...CAGCCTCAAGGGAAAACTTCCTCCTAGTGCAGCCCTATGCTTTAAAAACAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGGGTTTTGGCAGAGGGTaGATGAAGGGCTTTGTGGGG +
Preference number: 5 (lower is better)
Translates to: SLSQKGLLFNARRSPALQGFGRG*MKGFVG
Trigger: CCCCACAAAGCCCTTCATCAACCCTCTGCCAAAACC...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CAA 90 bp ACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCAAGGGTTCTCCTTCATaGGCGGATCTAGAATGTCTT +
Preference number: 5 (lower is better)
Translates to: TKTTHLHVGDTPGLGLPFKGSPS*ADLECL
Trigger: AAGACATTCTAGATCCGCCAATGAAGGAGAACCCTT...GAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp CCTGAGTTGCTCTCCATTGACTGGGACAGCCTCTTCACCCGTTTCTTTCCTCTCTTGGACAATGACTGCTaGGTGAGTGTGTCAGGGATG +
Preference number: 5 (lower is better)
Translates to: PELLSIDWDSLFTRFFPLLDNDC*VSVSGM
Trigger: CATCCCTGACACACTCACCAAGCAGTCATTGTCCAA...GAGAGGAAAGAAACGGGTGAAGAGGCTGTCCCAGTCAATGGAGAGCAACTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475837.1
CDS-3UTR CAA 90 bp CAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGATTCGCAACACCAGCTaGGGTATCTTTCTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: QNNPFACRRHAWSRAPFLIRNTS*GIFLFF
Trigger: GAAGAAGAGAAAGATACCCAAGCTGGTGTTGCGAAT...CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp ACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCATTCGCAACACCAGCTaGGGTATCTTTCTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: TKTTHLHVGDTPGLGLPFIRNTS*GIFLFF
Trigger: GAAGAAGAGAAAGATACCCAAGCTGGTGTTGCGAAT...GAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp TTCCTGAGTTGCTCTCCATTGACTGGGACAGCCTCTTCACCCGTTTCTTTCCTCCTGAGTTGCTCTCCATaGACTGGGACAGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: FLSCSPLTGTASSPVSFLLSCSP*TGTASS
Trigger: TGAAGAGGCTGTCCCAGTCAATGGAGAGCAACTCAG...GAGGAAAGAAACGGGTGAAGAGGCTGTCCCAGTCAATGGAGAGCAACTCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475837.1
CDS-3UTR CAA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGGCTTCTCTCATGAACTaGAAAGACCTTTCCAACTTC +
Preference number: 5 (lower is better)
Translates to: KQPICMSATRLVSGSLSGASLMN*KDLSNF
Trigger: GAAGTTGGAAAGGTCTTTCAAGTTCATGAGAGAAGC...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGGGCGGGTACCTGAGCTaGTCTGCAATGAAGATGACC +
Preference number: 5 (lower is better)
Translates to: SLSQKGLLFNARRSPALQGGYLS*SAMKMT
Trigger: GGTCATCTTCATTGCAGACAAGCTCAGGTACCCGCC...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CAA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACGGAGTTTCACCATGTaGCACAGGCTGGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSRSFTM*HRLASN
Trigger: GTTCGAGGCCAGCCTGTGCAACATGGTGAAACTCCG...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CAA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCATTTATGTTGAGGGACTaGTGCCGGGGTCTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSFMLRD*CRGLAL
Trigger: CAGAGCCAGACCCCGGCACAAGTCCCTCAACATAAA...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CAA 90 bp CAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGTCCCATTCTGATATCTaGTCCTTTATGTTGAGGGAC +
Preference number: 5 (lower is better)
Translates to: QNNPFACRRHAWSRAPFLSHSDI*SFMLRD
Trigger: GTCCCTCAACATAAAGGACAAGATATCAGAATGGGA...CAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp AAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGTCCCATTCTGATATCTaGTCCTTTATGTTGAGGGAC +
Preference number: 5 (lower is better)
Translates to: KTTHLHVGDTPGLGLPFWSHSDI*SFMLRD
Trigger: GTCCCTCAACATAAAGGACAAGATATCAGAATGGGA...CCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGCCTTCTCCGGCATGTTaGAACGTTCTCCGGGGTTTT +
Preference number: 5 (lower is better)
Translates to: SLSQKGLLFNARRSPALQPSPAC*NVLRGF
Trigger: AAAACCCCGGAGAACGTTCAAACATGCCGGAGAAGG...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CAA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTCCTTCTCCGGCATGTTaGAACGTTCTCCGGGGTTTT +
Preference number: 5 (lower is better)
Translates to: WDPAFQKGHQELFLKHRAPSPAC*NVLRGF
Trigger: AAAACCCCGGAGAACGTTCAAACATGCCGGAGAAGG...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATCTGAGTTGCTCTCCATaGACTGGGACAGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHLSCSP*TGTASS
Trigger: TGAAGAGGCTGTCCCAGTCAATGGAGAGCAACTCAG...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CAA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGCTTCAGAGGGAACTGTaGGGTGAGTTCTGGCACGTA +
Preference number: 5 (lower is better)
Translates to: SLSQKGLLFNARRSPALQLQREL*GEFWHV
Trigger: TACGTGCCAGAACTCACCCAACAGTTCCCTCTGAAG...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CAA 90 bp GAACTGTTTTTAAAGCATAGGGCTGCACTAGGAGGAAGTTTTCCCTTGAGGCTGCTGAGGAACCGGCTGTaGACGAGGTCAACCACAAGG +
Preference number: 5 (lower is better)
Translates to: ELFLKHRAALGGSFPLRLLRNRL*TRSTTR
Trigger: CCTTGTGGTTGACCTCGTCAACAGCCGGTTCCTCAG...CAGCCTCAAGGGAAAACTTCCTCCTAGTGCAGCCCTATGCTTTAAAAACAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTCCCTTCAGGAACTTATaGACACCGCTGTGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: WDPAFQKGHQELFLKHRAPFRNL*TPLCSP
Trigger: TGGAGAGCACAGCGGTGTCAATAAGTTCCTGAAGGG...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTACGGAGTTTCACCATGTaGGCCAGGATGGTCTCAATC +
Preference number: 5 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLRSFTM*ARMVSI
Trigger: GATTGAGACCATCCTGGCCAACATGGTGAAACTCCG...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CAA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATATCTTGTCCTTTATGTaGAGGGACTTGTGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHILSFM*RDLCRG
Trigger: ACCCCGGCACAAGTCCCTCAACATAAAGGACAAGAT...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CAA 90 bp GATTCTTGTACCTCAGCCTCTCAAGTAGCTGGTGTTACAAGCACGAGCCACCATTTGGACAATGACTGCTaGGTGAGTGTGTCAGGGATG +
Preference number: 5 (lower is better)
Translates to: DSCTSASQVAGVTSTSHHLDNDC*VSVSGM
Trigger: CATCCCTGACACACTCACCAAGCAGTCATTGTCCAA...ATGGTGGCTCGTGCTTGTAACACCAGCTACTTGAGAGGCTGAGGTACAAGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CAA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAACAGGAACCCAATCCTaGGCATCGGGAAAACAGAAC +
Preference number: 5 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLTGTQS*ASGKQN
Trigger: GTTCTGTTTTCCCGATGCCAAGGATTGGGTTCCTGT...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CAA 90 bp AACCACCAAAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCAGAAATTTCATTTTATaGCCTAGTCCCTTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: NHQNNPFACRRHAWSRAPRNFIL*PSPFRN
Trigger: GTTCCTGAAGGGACTAGGCAATAAAATGAAATTTCT...GGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTTTGGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp AAACAACCCATTTGCATGTCGGCGACACGCCTGGTCTCGGGCTCCCTTTCTGGGAGAAATTTCATTTTATaGCCTAGTCCCTTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: KQPICMSATRLVSGSLSGRNFIL*PSPFRN
Trigger: GTTCCTGAAGGGACTAGGCAATAAAATGAAATTTCT...CCCAGAAAGGGAGCCCGAGACCAGGCGTGTCGCCGACATGCAAATGGGTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp CAGCCTCTTCACCCGTTTCTTTCCTCTCCGGACCTCATAAATGGCGTTGATTCGAAGGGTTCTCCTTCATaGGCGGATCTAGAATGTCTT +
Preference number: 5 (lower is better)
Translates to: QPLHPFLSSPDLINGVDSKGSPS*ADLECL
Trigger: AAGACATTCTAGATCCGCCAATGAAGGAGAACCCTT...CGAATCAACGCCATTTATGAGGTCCGGAGAGGAAAGAAACGGGTGAAGAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475837.1
CDS-3UTR CAA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACTTGGACCTTCCACCTaGACCTTGTCAGCCAATTTG +
Preference number: 5 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSLGPST*TLSANL
Trigger: CAAATTGGCTGACAAGGTCAAGGTGGAAGGTCCAAG...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CAA 90 bp GAACTGTTTTTAAAGCATAGGGCTGCACTAGGAGGAAGTTTTCCCTTGAGGCTGATCTTGTCCTTTATGTaGAGGGACTTGTGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: ELFLKHRAALGGSFPLRLILSFM*RDLCRG
Trigger: ACCCCGGCACAAGTCCCTCAACATAAAGGACAAGAT...CAGCCTCAAGGGAAAACTTCCTCCTAGTGCAGCCCTATGCTTTAAAAACAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGAAGGGTTCTCCTTCATaGGCGGATCTAGAATGTCTT +
Preference number: 5 (lower is better)
Translates to: SLSQKGLLFNARRSPALQKGSPS*ADLECL
Trigger: AAGACATTCTAGATCCGCCAATGAAGGAGAACCCTT...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CAA 90 bp CTTTTCCTGAGTTGCTCTCCATTGACTGGGACAGCCTCTTCACCCGTTTCTTTCATTCGCAACACCAGCTaGGGTATCTTTCTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LFLSCSPLTGTASSPVSFIRNTS*GIFLFF
Trigger: GAAGAAGAGAAAGATACCCAAGCTGGTGTTGCGAAT...GAAAGAAACGGGTGAAGAGGCTGTCCCAGTCAATGGAGAGCAACTCAGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475837.1
CDS-3UTR CAA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAATTCGCAACACCAGCTaGGGTATCTTTCTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLIRNTS*GIFLFF
Trigger: GAAGAAGAGAAAGATACCCAAGCTGGTGTTGCGAAT...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CAA 90 bp GAACTGTTTTTAAAGCATAGGGCTGCACTAGGAGGAAGTTTTCCCTTGAGGCTGACAGGAACCCAATCCTaGGCATCGGGAAAACAGAAC +
Preference number: 5 (lower is better)
Translates to: ELFLKHRAALGGSFPLRLTGTQS*ASGKQN
Trigger: GTTCTGTTTTCCCGATGCCAAGGATTGGGTTCCTGT...CAGCCTCAAGGGAAAACTTCCTCCTAGTGCAGCCCTATGCTTTAAAAACAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp CAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCATGGAATGTCATTCTGTaGCTCAGGCTGGAGTGCAAT +
Preference number: 5 (lower is better)
Translates to: QPIPSLSQKGLLFNARRSWNVIL*LRLECN
Trigger: ATTGCACTCCAGCCTGAGCAACAGAATGACATTCCA...TGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CAA 90 bp ACCGCGCCCAGCCTATTCCATCCTTATCTCAGAAGGGCTTACTCTTCAATGCTATCCCATTCTGATATCTaGTCCTTTATGTTGAGGGAC +
Preference number: 5 (lower is better)
Translates to: TAPSLFHPYLRRAYSSMLSHSDI*SFMLRD
Trigger: GTCCCTCAACATAAAGGACAAGATATCAGAATGGGA...TAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGATGGAATAGGCTGGGCGCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CAA 90 bp TGGGACCCAGCCTTTCAGAAAGGCCACCAGGAACTGTTTTTAAAGCATAGGGCTGCTTCTCTCATGAACTaGAAAGACCTTTCCAACTTC +
Preference number: 5 (lower is better)
Translates to: WDPAFQKGHQELFLKHRAASLMN*KDLSNF
Trigger: GAAGTTGGAAAGGTCTTTCAAGTTCATGAGAGAAGC...AGCCCTATGCTTTAAAAACAGTTCCTGGTGGCCTTTCTGAAAGGCTGGGTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS-3UTR CAA 90 bp TCCTTATCTCAGAAGGGCTTACTCTTCAATGCTAGGCGGTCACCTGCTCTACAGGCTTCTCTCATGAACTaGAAAGACCTTTCCAACTTC +
Preference number: 5 (lower is better)
Translates to: SLSQKGLLFNARRSPALQASLMN*KDLSNF
Trigger: GAAGTTGGAAAGGTCTTTCAAGTTCATGAGAGAAGC...CTGTAGAGCAGGTGACCGCCTAGCATTGAAGAGTAAGCCCTTCTGAGATAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS-3UTR CAA 90 bp ACTGGGGAGTGTTTCCAGATACTCTTGGGCTCGGACCTCAAACAGACCTTTGGCAGAAATTTCATTTTATaGCCTAGTCCCTTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: TGECFQILLGSDLKQTFGRNFIL*PSPFRN
Trigger: GTTCCTGAAGGGACTAGGCAATAAAATGAAATTTCT...GCCAAAGGTCTGTTTGAGGTCCGAGCCCAAGAGTATCTGGAAACACTCCCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461883.5
CDS CCA 72 bp GGCTCCCTGCCTTCCAGGTCCGAGGGGTGGACCCTCTaGCTGACTTCTGAGCCACTCCCGCCTCCCAGGTTC +
Preference number: 6 (lower is better)
Translates to: GSLPSRSEGWTL*LTSEPLPPPRF
Trigger: GAACCTGGGAGGCGGGAGTGGCTCAGAAGTCAGCCAGAGGGTCCACCCCTCGGACCTGGAAGGCAGGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS TCA 72 bp CCCTGCCTTCCAGGTCCGAGGGGTGGACCCTCTGGCTaGCTTCTGAGCCACTCCCGCCTCCCAGGTTCTCAG +
Preference number: 6 (lower is better)
Translates to: PCLPGPRGGPSG*LLSHSRLPGSQ
Trigger: CTGAGAACCTGGGAGGCGGGAGTGGCTCAGAAGTCAGCCAGAGGGTCCACCCCTCGGACCTGGAAGGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS CCA 72 bp CCTCGGCCCCAGCTAGGATCCACTTCCCGTTCTGGCTaGCTTAGGTCTTGCCCCGGCTCTGGGTCCTGTCCC +
Preference number: 6 (lower is better)
Translates to: PRPQLGSTSRSG*LRSCPGSGSCP
Trigger: GGGACAGGACCCAGAGCCGGGGCAAGACCTAAGCCAGCCAGAACGGGAAGTGGATCCTAGCTGGGGCCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000491728.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS GCA 72 bp ATGAGTTCCCGGGCAAGTGATGGGTACCGAGGCGCCTaGTTCAGCCGGGACTTCACGTTGACCAGGCGCTGG +
Preference number: 6 (lower is better)
Translates to: MSSRASDGYRGA*FSRDFTLTRRW
Trigger: CCAGCGCCTGGTCAACGTGAAGTCCCGGCTGAAGCAGGCGCCTCGGTACCCATCACTTGCCCGGGAACTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS TCA 72 bp GGTACCGAGGCGCCTGCTTCAGCCGGGACTTCACGTTaGCCAGGCGCTGGCTGTGAGCTTTCAGCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: GTEAPASAGTSR*PGAGCELSASP
Trigger: AGGAGAAGCTGAAAGCTCACAGCCAGCGCCTGGTCAACGTGAAGTCCCGGCTGAAGCAGGCGCCTCGGTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS TCA 72 bp CTGCCTCTCCTGGTACTCGATGAGTTCCCGGGCAAGTaGTGGGTACCGAGGCGCCTGCTTCAGCCGGGACTT +
Preference number: 6 (lower is better)
Translates to: LPLLVLDEFPGK*WVPRRLLQPGL
Trigger: AAGTCCCGGCTGAAGCAGGCGCCTCGGTACCCATCACTTGCCCGGGAACTCATCGAGTACCAGGAGAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS GCA 72 bp TCTGGACCGTGCCTGCCGTCTAGGGGCCCTTCGTCCTaGTCACAAGCCAGCTCGTTCCTCTGTTCCAGAATG +
Preference number: 6 (lower is better)
Translates to: SGPCLPSRGPSS*SQASSFLCSRM
Trigger: CATTCTGGAACAGAGGAACGAGCTGGCTTGTGAGCAGGACGAAGGGCCCCTAGACGGCAGGCACGGTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS GCA 72 bp TCCAGGTCACGCAGGACACCGTCAAGGAACACAGGCTaGACAGCAGAAGTCCGCAGGGAAATGCCGTGGGCT +
Preference number: 6 (lower is better)
Translates to: SRSRRTPSRNTG*TAEVRREMPWA
Trigger: AGCCCACGGCATTTCCCTGCGGACTTCTGCTGTGCAGCCTGTGTTCCTTGACGGTGTCCTGCGTGACCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491728.5
CDS GCA 72 bp TGGGGATCCAGCCCTGCCGACCCATCCTTCAAAGCCTaGTCGAGTTTCTTGACCTGCTTCAGCACGGAGAGG +
Preference number: 6 (lower is better)
Translates to: WGSSPADPSFKA*SSFLTCFSTER
Trigger: CCTCTCCGTGCTGAAGCAGGTCAAGAAACTCGAGCAGGCTTTGAAGGATGGGTCGGCAGGGCTGGATCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS CCA 72 bp GGGGGAGCATCCTCTCTTTTGAGAACCGGGAACCTGTaGGCTCAGGCTGCGTGGCCCAGGTGTACAAAGCAT +
Preference number: 6 (lower is better)
Translates to: GGASSLLRTGNL*AQAAWPRCTKH
Trigger: ATGCTTTGTACACCTGGGCCACGCAGCCTGAGCCCACAGGTTCCCGGTTCTCAAAAGAGAGGATGCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489552.1
CDS TCA 72 bp CAAAGTACTCGAAGAGCTGCCTCTCCTGGTACTCGATaGGTTCCCGGGCAAGTGATGGGTACCGAGGCGCCT +
Preference number: 6 (lower is better)
Translates to: QSTRRAASPGTR*VPGQVMGTEAP
Trigger: AGGCGCCTCGGTACCCATCACTTGCCCGGGAACTCATCGAGTACCAGGAGAGGCAGCTCTTCGAGTACTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS TCA 72 bp TCGTTCCTCTGTTCCAGAATGTGTTCCAGGGCCACCTaGAGCTTCCGGGGCAGGATGGAGTCCTCATCGTCC +
Preference number: 6 (lower is better)
Translates to: SFLCSRMCSRAT*SFRGRMESSSS
Trigger: GGACGATGAGGACTCCATCCTGCCCCGGAAGCTTCAGGTGGCCCTGGAACACATTCTGGAACAGAGGAACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS GCA 72 bp TCCTCCGATAAAGTGCGTGTCAGCCCCAGCTTAGTCTaGGCGTACCAGTCCACCCTGCTGCTCTCAGAGGAA +
Preference number: 6 (lower is better)
Translates to: SSDKVRVSPSLV*AYQSTLLLSEE
Trigger: TTCCTCTGAGAGCAGCAGGGTGGACTGGTACGCGCAGACTAAGCTGGGGCTGACACGCACTTTATCGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000475837.1
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS CCA 72 bp GTTGAGGGACTTGTGCCGGGGTCTGGCTCTGGCAGATaGGCAAGGGTTCTGAACACCTCTGAGCTGCTTCTT +
Preference number: 6 (lower is better)
Translates to: VEGLVPGSGSGR*ARVLNTSELLL
Trigger: AAGAAGCAGCTCAGAGGTGTTCAGAACCCTTGCCCATCTGCCAGAGCCAGACCCCGGCACAAGTCCCTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000477488.1
ENST00000489552.1
ENST00000491728.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS CAA 72 bp GAGTCCTCATCGTCCATCTGTCTGAGGAACCGGCTGTaGACGAGGTCAACCACAAGGACCTCTTCCAGCGGC +
Preference number: 6 (lower is better)
Translates to: ESSSSICLRNRL*TRSTTRTSSSG
Trigger: GCCGCTGGAAGAGGTCCTTGTGGTTGACCTCGTCAACAGCCGGTTCCTCAGACAGATGGACGATGAGGACTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000496613.6
ENST00000537639.5
CDS GCA 72 bp TATACACGTTCTCAAGGCTCCGGTCCCAGGGCCTTCTaGATGAACCTTTCCTGTCCTCCACAAGCTCAGGGG +
Preference number: 6 (lower is better)
Translates to: YTRSQGSGPRAF*MNLSCPPQAQG
Trigger: CCCCTGAGCTTGTGGAGGACAGGAAAGGTTCATGCAGAAGGCCCTGGGACCGGAGCCTTGAGAACGTGTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS CCA 72 bp CCTTTCCAACTTCAGAGGGAACTGTTGGGTGAGTTCTaGCACGTAGGCAGCCCCGGCCTGCTTCTTGTGCAA +
Preference number: 6 (lower is better)
Translates to: PFQLQRELLGEF*HVGSPGLLLVQ
Trigger: TTGCACAAGAAGCAGGCCGGGGCTGCCTACGTGCCAGAACTCACCCAACAGTTCCCTCTGAAGTTGGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS CCA 72 bp TGTAGCTCAGGTTTTCAGTCTGGCTGTGGCTGCCCTTaGCCGGCCTGCACACTGTCATCATGTCAGTACCGA +
Preference number: 6 (lower is better)
Translates to: CSSGFQSGCGCP*PACTLSSCQYR
Trigger: TCGGTACTGACATGATGACAGTGTGCAGGCCGGCCAAGGGCAGCCACAGCCAGACTGAAAACCTGAGCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477488.1
ENST00000491728.5
ENST00000492720.5
ENST00000496613.6
CDS TCA 72 bp TTCTTGACCTGCTTCAGCACGGAGAGGGGATCGTTCTaGAAGCGTAGCTTGCCAAGTCTTGGCTCTCGGCCT +
Preference number: 6 (lower is better)
Translates to: FLTCFSTERGSF*KRSLPSLGSRP
Trigger: AGGCCGAGAGCCAAGACTTGGCAAGCTACGCTTTCAGAACGATCCCCTCTCCGTGCTGAAGCAGGTCAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS TCA 72 bp CTGCCGACCCATCCTTCAAAGCCTGCTCGAGTTTCTTaGCCTGCTTCAGCACGGAGAGGGGATCGTTCTGAA +
Preference number: 6 (lower is better)
Translates to: LPTHPSKPARVS*PASARRGDRSE
Trigger: TTCAGAACGATCCCCTCTCCGTGCTGAAGCAGGTCAAGAAACTCGAGCAGGCTTTGAAGGATGGGTCGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS CCA 72 bp GACACAACCACAAAGTACTCGAAGAGCTGCCTCTCCTaGTACTCGATGAGTTCCCGGGCAAGTGATGGGTAC +
Preference number: 6 (lower is better)
Translates to: DTTTKYSKSCLS*YSMSSRASDGY
Trigger: GTACCCATCACTTGCCCGGGAACTCATCGAGTACCAGGAGAGGCAGCTCTTCGAGTACTTTGTGGTTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS CAA 72 bp TCCCATTCTGATATCTTGTCCTTTATGTTGAGGGACTaGTGCCGGGGTCTGGCTCTGGCAGATGGGCAAGGG +
Preference number: 6 (lower is better)
Translates to: SHSDILSFMLRD*CRGLALADGQG
Trigger: CCCTTGCCCATCTGCCAGAGCCAGACCCCGGCACAAGTCCCTCAACATAAAGGACAAGATATCAGAATGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000477488.1
ENST00000489552.1
ENST00000491728.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS CAA 72 bp CGCTTTAGCAGAAGTAGCCAAGGCGGGTACCTGAGCTaGTCTGCAATGAAGATGACCCTCCTCTCCAGAAGC +
Preference number: 6 (lower is better)
Translates to: RFSRSSQGGYLS*SAMKMTLLSRS
Trigger: GCTTCTGGAGAGGAGGGTCATCTTCATTGCAGACAAGCTCAGGTACCCGCCTTGGCTACTTCTGCTAAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS CAA 90 bp TCATTCAAACGCTTTAGCAGAAGTAGCCAAGGCGGGTACCTGAGCTaGTCTGCAATGAAGATGACCCTCCTCTCCAGAAGCAGGGAGGCA +
Preference number: 6 (lower is better)
Translates to: SFKRFSRSSQGGYLS*SAMKMTLLSRSREA
Trigger: TGCCTCCCTGCTTCTGGAGAGGAGGGTCATCTTCATTGCAGACAAGCTCAGGTACCCGCCTTGGCTACTTCTGCTAAAGCGTTTGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492720.5
CDS GCA 72 bp TTGTGCAAAGACACAACCACAAAGTACTCGAAGAGCTaGCTCTCCTGGTACTCGATGAGTTCCCGGGCAAGT +
Preference number: 6 (lower is better)
Translates to: LCKDTTTKYSKS*LSWYSMSSRAS
Trigger: ACTTGCCCGGGAACTCATCGAGTACCAGGAGAGGCAGCTCTTCGAGTACTTTGTGGTTGTGTCTTTGCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS CAA 72 bp AAGCTGAACATATCCATTCTTGACTCTAGCGTGAGGTaGTGGAGGCCTTCCAGGGGACTCCTTCTGAAGCCT +
Preference number: 6 (lower is better)
Translates to: KLNISILDSSVR*WRPSRGLLLKP
Trigger: AGGCTTCAGAAGGAGTCCCCTGGAAGGCCTCCACAACCTCACGCTAGAGTCAAGAATGGATATGTTCAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000477488.1
ENST00000489552.1
ENST00000491728.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS TCA 72 bp CCCGTTTCTTTCCTCTCCGGACCTCATAAATGGCGTTaGTTCGCAACACCAGCTTGGGTATCTTTCTCTTCT +
Preference number: 6 (lower is better)
Translates to: PVSFLSGPHKWR*FATPAWVSFSS
Trigger: AGAAGAGAAAGATACCCAAGCTGGTGTTGCGAATCAACGCCATTTATGAGGTCCGGAGAGGAAAGAAACGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000475837.1
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5
CDS CAA 72 bp ATGGCCTTCAGTTGGTCCTCAGCTTCTCTCATGAACTaGAAAGACCTTTCCAACTTCAGAGGGAACTGTTGG +
Preference number: 6 (lower is better)
Translates to: MAFSWSSASLMN*KDLSNFRGNCW
Trigger: CCAACAGTTCCCTCTGAAGTTGGAAAGGTCTTTCAAGTTCATGAGAGAAGCTGAGGACCAACTGAAGGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275884.10
ENST00000461883.5
ENST00000492720.5
ENST00000496613.6
ENST00000537639.5