RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DENND1B (Homo sapiens)

Ensembl gene IDs: ENSG00000213047

Ensembl transcript IDs: ENST00000235453.8, ENST00000294737.11, ENST00000294738.5, ENST00000367396.7, ENST00000422998.1, ENST00000463124.1, ENST00000468589.5, ENST00000477581.1, ENST00000495550.5, ENST00000496935.1, ENST00000620048.6

Found 418 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTAGAGGAAACCCGCTTCCTAGGAGATGGAGGGAGGTGTTTGCCATaGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTTGGTCA +
Preference number: 1 (lower is better)
Translates to: LEETRFLGDGGRCLP*RALSSCPRFHSAWS
Trigger: TGACCAAGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCTCCCTCCATCTCCTAGGAAGCGGGTTTCCTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR GCA 90 bp GTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTaGTTGGTCACCAGAACCACCACAGAGGAAAGCCAGGTTATTCTC +
Preference number: 1 (lower is better)
Translates to: VFAMEGTIVLPKIPL*LVTRTTTEESQVIL
Trigger: GAGAATAACCTGGCTTTCCTCTGTGGTGGTTCTGGTGACCAAGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR TCA 90 bp ATCAGTCTGGGAAACTTCAGGGGAAGTGAGTTGGAAATCCAGTCCTaGAGTAGGGTCACTCACATTGTCAGCACCGAGGTGCTTGTTACT +
Preference number: 1 (lower is better)
Translates to: ISLGNFRGSELEIQS*SRVTHIVSTEVLVT
Trigger: AGTAACAAGCACCTCGGTGCTGACAATGTGAGTGACCCTACTTCAGGACTGGATTTCCAACTCACTTCCCCTGAAGTTTCCCAGACTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR GCA 90 bp CCAAGCTCTTTGCAGCTGCCAGCTTCCCCTGATCTGAGCTGTGTGTaGTCAATGTATCAAGAATCTCTCCTAGTAAGTCCATTTCACCTG +
Preference number: 1 (lower is better)
Translates to: PSSLQLPASPDLSCV*SMYQESLLVSPFHL
Trigger: CAGGTGAAATGGACTTACTAGGAGAGATTCTTGATACATTGAGCACACACAGCTCAGATCAGGGGAAGCTGGCAGCTGCAAAGAGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR TCA 90 bp ATTGATCTAAAGAAATCCAAGCTCTTTGCAGCTGCCAGCTTCCCCTaGTCTGAGCTGTGTGTGCTCAATGTATCAAGAATCTCTCCTAGT +
Preference number: 1 (lower is better)
Translates to: IDLKKSKLFAAASFP*SELCVLNVSRISPS
Trigger: ACTAGGAGAGATTCTTGATACATTGAGCACACACAGCTCAGATCAGGGGAAGCTGGCAGCTGCAAAGAGCTTGGATTTCTTTAGATCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR TCA 90 bp AGGTCCCTGTCAGCATTCACAAATCATGTTGACAGTACGTACCCTTaGTATGACCTGATGAAAATGGCACTTTACTTCTGTGATCATCTC +
Preference number: 1 (lower is better)
Translates to: RSLSAFTNHVDSTYP*YDLMKMALYFCDHL
Trigger: GAGATGATCACAGAAGTAAAGTGCCATTTTCATCAGGTCATATCAAGGGTACGTACTGTCAACATGATTTGTGAATGCTGACAGGGACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
3UTR TCA 90 bp AGGAGCATTAGATTTATTCGTAGGTTTGTAATCAATGTCATCCATTaGTCTAAAGAAATCCAAGCTCTTTGCAGCTGCCAGCTTCCCCTG +
Preference number: 1 (lower is better)
Translates to: RSIRFIRRFVINVIH*SKEIQALCSCQLPL
Trigger: CAGGGGAAGCTGGCAGCTGCAAAGAGCTTGGATTTCTTTAGATCAATGGATGACATTGATTACAAACCTACGAATAAATCTAATGCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR GCA 90 bp CAGCAAATAATGAATGAACACGACATTTCAAGGACTCAAGCAAAATaGTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAAT +
Preference number: 1 (lower is better)
Translates to: QQIMNEHDISRTQAK*SASQDYTPLQSCKN
Trigger: ATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTGAGTCCTTGAAATGTCGTGTTCATTCATTATTTGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
3UTR GCA 90 bp CATAGAGATAAGCAGAAGCTTCTTCACCATCTTCAGAAGATAACTTaGTTGCTCTTTCAATGTCATCATCATCTTCATCATCATATAGAG +
Preference number: 1 (lower is better)
Translates to: HRDKQKLLHHLQKIT*LLFQCHHHLHHHIE
Trigger: CTCTATATGATGATGAAGATGATGATGACATTGAAAGAGCAAGCAAGTTATCTTCTGAAGATGGTGAAGAAGCTTCTGCTTATCTCTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR TCA 90 bp TTTTTGTCTGAAATGTTCAAGCTTTGTTGGAAGTCAGATGTCATATaGCATAATGACACTACTTCATGGAGCAGTCCAATATCTTCTGAA +
Preference number: 1 (lower is better)
Translates to: FLSEMFKLCWKSDVI*HNDTTSWSSPISSE
Trigger: TTCAGAAGATATTGGACTGCTCCATGAAGTAGTGTCATTATGTCATATGACATCTGACTTCCAACAAAGCTTGAACATTTCAGACAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR TCA 90 bp AAAATACCCAACAAACTCCAAGAGAGGAGCATGCTACAATTTATCTaGCAGTACTCTTCAAAGCTGTCAATGTCATCAAAAATAAGGAAA +
Preference number: 1 (lower is better)
Translates to: KIPNKLQERSMLQFI*QYSSKLSMSSKIRK
Trigger: TTTCCTTATTTTTGATGACATTGACAGCTTTGAAGAGTACTGTCAGATAAATTGTAGCATGCTCCTCTCTTGGAGTTTGTTGGGTATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620048.6
3UTR TCA 90 bp AGTTTGGAGATGATTTATACTGTAGCCTCAAGGATGCAAGAACAATaGAGTAAAATCACAATTCTGGGTAGGTTTTTACAGATATCTGCT +
Preference number: 1 (lower is better)
Translates to: SLEMIYTVASRMQEQ*SKITILGRFLQISA
Trigger: AGCAGATATCTGTAAAAACCTACCCAGAATTGTGATTTTACTTCATTGTTCTTGCATCCTTGAGGCTACAGTATAAATCATCTCCAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620048.6
3UTR-3UTR TCA 90 bp GGAGGTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTTGCTGCCAGCTTCCCCTaGTCTGAGCTGTGTGTGCTC +
Preference number: 2 (lower is better)
Translates to: GGVCHGGHYRLAQDSTLLAASFP*SELCVL
Trigger: GAGCACACACAGCTCAGATCAGGGGAAGCTGGCAGC...AAGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR CAA 90 bp AAACCACTAGAGGAAACCCGCTTCCTAGGAGATGGAGGGAGGTGTTaGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCT +
Preference number: 2 (lower is better)
Translates to: KPLEETRFLGDGGRC*PWRALSSCPRFHSA
Trigger: AGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCTCCCTCCATCTCCTAGGAAGCGGGTTTCCTCTAGTGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR-3UTR TCA 90 bp AGGTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTTGGCAGCTTCCCCTGATCTaGGCTGTGTGTGCTCAATGT +
Preference number: 2 (lower is better)
Translates to: RCLPWRALSSCPRFHSAWQLPLI*AVCAQC
Trigger: ACATTGAGCACACACAGCTCAGATCAGGGGAAGCTG...CCAAGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR CAA 90 bp TTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTaGGTCACCAGAACCACCACAGAGGAAAGCCAGGTTATTCTCACT +
Preference number: 2 (lower is better)
Translates to: FAMEGTIVLPKIPLC*VTRTTTEESQVILT
Trigger: AGTGAGAATAACCTGGCTTTCCTCTGTGGTGGTTCTGGTGACCAAGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR-3UTR CCA 90 bp GATGAATGCCGCCCAAGACCGGGTATAAGCAGATCATCTGAAATCTGGCTTAGTGGGAGGTGTTTGCCATaGAGGGCACTATCGTCTTGC +
Preference number: 2 (lower is better)
Translates to: DECRPRPGISRSSEIWLSGRCLP*RALSSC
Trigger: GCAAGACGATAGTGCCCTCCATGGCAAACACCTCCC...ACTAAGCCAGATTTCAGATGATCTGCTTATACCCGGTCTTGGGCGGCATTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR-3UTR GCA 90 bp GATGAATGCCGCCCAAGACCGGGTATAAGCAGATCATCTGAAATCTGGCTTAGTATGGAGGGAGGTGTTTaGCATGGAGGGCACTATCGT +
Preference number: 2 (lower is better)
Translates to: DECRPRPGISRSSEIWLSMEGGV*HGGHYR
Trigger: ACGATAGTGCCCTCCATGGCAAACACCTCCCTCCAT...ACTAAGCCAGATTTCAGATGATCTGCTTATACCCGGTCTTGGGCGGCATTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR-3UTR GCA 90 bp GGGAGGTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTTTTTGCAAATTTATATaGTGTCCGTACAGCAGGGGT +
Preference number: 2 (lower is better)
Translates to: GRCLPWRALSSCPRFHSAFCKFI*CPYSRG
Trigger: ACCCCTGCTGTACGGACAGCATATAAATTTGCAAAA...AGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR CAA 90 bp GGGGAAGTGAGTTGGAAATCCAGTCCTGAAGTAGGGTCACTCACATaGTCAGCACCGAGGTGCTTGTTACTGTTTTCCTCTTTCAGGATA +
Preference number: 2 (lower is better)
Translates to: GEVSWKSSPEVGSLT*SAPRCLLLFSSFRI
Trigger: TATCCTGAAAGAGGAAAACAGTAACAAGCACCTCGGTGCTGACAATGTGAGTGACCCTACTTCAGGACTGGATTTCCAACTCACTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR-3UTR GCA 90 bp AGGTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTTGGGATCTGAGCTGTGTGTaGTCAATGTATCAAGAATCT +
Preference number: 2 (lower is better)
Translates to: RCLPWRALSSCPRFHSAWDLSCV*SMYQES
Trigger: AGATTCTTGATACATTGAGCACACACAGCTCAGATC...CCAAGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR-3UTR TCA 90 bp GATGAATGCCGCCCAAGACCGGGTATAAGCAGATCATCTGAAATCTGGCTTAGTAAGCTTACGCTTTTCTaGGTTTCCTCCCTTTTCATT +
Preference number: 2 (lower is better)
Translates to: DECRPRPGISRSSEIWLSKLTLF*VSSLFI
Trigger: AATGAAAAGGGAGGAAACTCAGAAAAGCGTAAGCTT...ACTAAGCCAGATTTCAGATGATCTGCTTATACCCGGTCTTGGGCGGCATTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR CAA 90 bp TCTCTCCTAGTAAGTCCATTTCACCTGAGTAAGGAGTCTTCACTCTaGTTTCAACAGAGTCATCACTCTCATAGAGATAAGCAGAAGCTT +
Preference number: 2 (lower is better)
Translates to: SLLVSPFHLSKESSL*FQQSHHSHRDKQKL
Trigger: AAGCTTCTGCTTATCTCTATGAGAGTGATGACTCTGTTGAAACAAGAGTGAAGACTCCTTACTCAGGTGAAATGGACTTACTAGGAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR-3UTR TCA 90 bp TATGACATAATGACACTACTTCATGGAGCAGTCCAATATCTTCTGAAGTCTCTTAAACTTCAGGGGAAGTaGGTTGGAAATCCAGTCCTG +
Preference number: 2 (lower is better)
Translates to: YDIMTLLHGAVQYLLKSLKLQGK*VGNPVL
Trigger: CAGGACTGGATTTCCAACTCACTTCCCCTGAAGTTT...AAGAGACTTCAGAAGATATTGGACTGCTCCATGAAGTAGTGTCATTATGTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR CAA 90 bp CTCAAAATAACGTTATGGAAGTTACACTGTCAGAAGGATGGTGACTaGACATGTGATGCACTAAACATGCAGGTTTTAAATTCTGCCTTG +
Preference number: 2 (lower is better)
Translates to: LKITLWKLHCQKDGD*TCDALNMQVLNSAL
Trigger: CAAGGCAGAATTTAAAACCTGCATGTTTAGTGCATCACATGTCAAGTCACCATCCTTCTGACAGTGTAACTTCCATAACGTTATTTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
3UTR-3UTR TCA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGCTCGAAATGAACAAGTaGGAAAAATGTTGCAAATGC +
Preference number: 2 (lower is better)
Translates to: SRDYVSYFISHILSYCTLLEMNK*EKCCKC
Trigger: GCATTTGCAACATTTTTCTCACTTGTTCATTTCGAG...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620048.6
3UTR-3UTR TCA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATAATTCAGAAAGAACCATaGCTCCATTGCAGGCCAGAT +
Preference number: 2 (lower is better)
Translates to: QILKNMTLRHLPEKQMYIIQKEP*LHCRPD
Trigger: ATCTGGCCTGCAATGGAGTCATGGTTCTTTCTGAAT...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620048.6
3UTR-3UTR CCA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATATGTATTTGGCTTTCTTaGGGTGGACCCCTAAATAGC +
Preference number: 2 (lower is better)
Translates to: QILKNMTLRHLPEKQMYICIWLS*GGPLNS
Trigger: GCTATTTAGGGGTCCACCCCAAGAAAGCCAAATACA...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000620048.6
3UTR CAA 90 bp AGAGATAAGCAGAAGCTTCTTCACCATCTTCAGAAGATAACTTGCTaGCTCTTTCAATGTCATCATCATCTTCATCATCATATAGAGCAC +
Preference number: 2 (lower is better)
Translates to: RDKQKLLHHLQKITC*LFQCHHHLHHHIEH
Trigger: GTGCTCTATATGATGATGAAGATGATGATGACATTGAAAGAGCAAGCAAGTTATCTTCTGAAGATGGTGAAGAAGCTTCTGCTTATCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR-3UTR TCA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACATTTCTCTATACCCCTaGAATACCACGGATGCAATA +
Preference number: 2 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYISLYP*NTTDAI
Trigger: TATTGCATCCGTGGTATTTCAGGGGTATAGAGAAAT...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
3UTR-3UTR TCA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTACTGTACCCTGCATATaGCTGGTACAAAAAGTCAAT +
Preference number: 2 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFTVPCI*LVQKVN
Trigger: ATTGACTTTTTGTACCAGTCATATGCAGGGTACAGT...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620048.6
3UTR-3UTR GCA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACTCCAAGAGAGGAGCATaGTACAATTTATCTGACAGT +
Preference number: 2 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYSKRGA*YNLSDS
Trigger: ACTGTCAGATAAATTGTAGCATGCTCCTCTCTTGGA...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
3UTR-3UTR CCA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGTACTGGTTATGTGCATaGGTTACATATGCATTCTTA +
Preference number: 2 (lower is better)
Translates to: SRDYVSYFISHILSYCTLYWLCA*VTYAFL
Trigger: TAAGAATGCATATGTAACCCATGCACATAACCAGTA...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
3UTR-3UTR CCA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATAAGTAACAGGGGTAGATaGGAACTCTCTGTACTATCT +
Preference number: 2 (lower is better)
Translates to: QILKNMTLRHLPEKQMYISNRGR*ELSVLS
Trigger: AGATAGTACAGAGAGTTCCCATCTACCCCTGTTACT...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000620048.6
3UTR-3UTR CCA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACTTAAGCACCAAACACTaGGAAATCTCATGGTCAATA +
Preference number: 2 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYLSTKH*EISWSI
Trigger: TATTGACCATGAGATTTCCCAGTGTTTGGTGCTTAA...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
3UTR-3UTR GCA 90 bp TATGACATAATGACACTACTTCATGGAGCAGTCCAATATCTTCTGAAGTCTCTTCTTCAGAAGATAACTTaGTTGCTCTTTCAATGTCAT +
Preference number: 2 (lower is better)
Translates to: YDIMTLLHGAVQYLLKSLLQKIT*LLFQCH
Trigger: ATGACATTGAAAGAGCAAGCAAGTTATCTTCTGAAG...AAGAGACTTCAGAAGATATTGGACTGCTCCATGAAGTAGTGTCATTATGTCATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR-3UTR CCA 90 bp CAAAATGTCTCCATAGAAGCTTGGATGCAAGATTTAAGTTTGGTTTCCATTTGTAATGACACTACTTCATaGAGCAGTCCAATATCTTCT +
Preference number: 2 (lower is better)
Translates to: QNVSIEAWMQDLSLVSICNDTTS*SSPISS
Trigger: AGAAGATATTGGACTGCTCCATGAAGTAGTGTCATT...ACAAATGGAAACCAAACTTAAATCTTGCATCCAAGCTTCTATGGAGACATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR GCA 72 bp GGAGGGAGGTGTTTGCCATGGAGGGCACTATCGTCTTaGCCAAGATTCCACTCTGCTTGGTCACCAGAACCA +
Preference number: 3 (lower is better)
Translates to: GGRCLPWRALSS*PRFHSAWSPEP
Trigger: TGGTTCTGGTGACCAAGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCTCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR CCA 72 bp ACCCGCTTCCTAGGAGATGGAGGGAGGTGTTTGCCATaGAGGGCACTATCGTCTTGCCCAAGATTCCACTCT +
Preference number: 3 (lower is better)
Translates to: TRFLGDGGRCLP*RALSSCPRFHS
Trigger: AGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCTCCCTCCATCTCCTAGGAAGCGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR GCA 72 bp ATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTaGTTGGTCACCAGAACCACCACAGAGGAAAGCCAG +
Preference number: 3 (lower is better)
Translates to: MEGTIVLPKIPL*LVTRTTTEESQ
Trigger: CTGGCTTTCCTCTGTGGTGGTTCTGGTGACCAAGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR-3UTR CAA 90 bp GATGAATGCCGCCCAAGACCGGGTATAAGCAGATCATCTGAAATCTGGCTTAGTGTAGGGTCACTCACATaGTCAGCACCGAGGTGCTTG +
Preference number: 3 (lower is better)
Translates to: DECRPRPGISRSSEIWLSVGSLT*SAPRCL
Trigger: CAAGCACCTCGGTGCTGACAATGTGAGTGACCCTAC...ACTAAGCCAGATTTCAGATGATCTGCTTATACCCGGTCTTGGGCGGCATTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR TCA 72 bp GGAAACTTCAGGGGAAGTGAGTTGGAAATCCAGTCCTaGAGTAGGGTCACTCACATTGTCAGCACCGAGGTG +
Preference number: 3 (lower is better)
Translates to: GNFRGSELEIQS*SRVTHIVSTEV
Trigger: CACCTCGGTGCTGACAATGTGAGTGACCCTACTTCAGGACTGGATTTCCAACTCACTTCCCCTGAAGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR GCA 72 bp TTGCAGCTGCCAGCTTCCCCTGATCTGAGCTGTGTGTaGTCAATGTATCAAGAATCTCTCCTAGTAAGTCCA +
Preference number: 3 (lower is better)
Translates to: LQLPASPDLSCV*SMYQESLLVSP
Trigger: TGGACTTACTAGGAGAGATTCTTGATACATTGAGCACACACAGCTCAGATCAGGGGAAGCTGGCAGCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR-3UTR CAA 90 bp CAAAATGTCTCCATAGAAGCTTGGATGCAAGATTTAAGTTTGGTTTCCATTTGTGAGGGCACTATCGTCTaGCCCAAGATTCCACTCTGC +
Preference number: 3 (lower is better)
Translates to: QNVSIEAWMQDLSLVSICEGTIV*PKIPLC
Trigger: GCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTC...ACAAATGGAAACCAAACTTAAATCTTGCATCCAAGCTTCTATGGAGACATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR CCA 72 bp TTTTGTCAGGACGGTTTATGTTGTATTTGGCTTTCTTaGGGTGGACCCCTAAATAGCAAAGGCATACAGAGA +
Preference number: 3 (lower is better)
Translates to: FCQDGLCCIWLS*GGPLNSKGIQR
Trigger: TCTCTGTATGCCTTTGCTATTTAGGGGTCCACCCCAAGAAAGCCAAATACAACATAAACCGTCCTGACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
3UTR-3UTR CAA 90 bp GCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGTTTGTGGCCAACTTAATGCCTaGAGTAACAGGTATCAGGCA +
Preference number: 3 (lower is better)
Translates to: ALQVKTIHHYNRAKISVCGQLNA*SNRYQA
Trigger: TGCCTGATACCTGTTACTCAAGGCATTAAGTTGGCC...ACAAACTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
3UTR-3UTR CAA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTCGGTTTATGTTGTATTaGGCTTTCTTGGGGTGGACC +
Preference number: 3 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFRFMLY*AFLGWT
Trigger: GGTCCACCCCAAGAAAGCCAAATACAACATAAACCG...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
3UTR-3UTR CAA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACGCAATTCCTTTTCCTTaGTTCCTTCAGAGCAGGGAC +
Preference number: 3 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYAIPFP*FLQSRD
Trigger: GTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGC...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
3UTR-3UTR CAA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTTCAGGACGGTTTATGTaGTATTTGGCTTTCTTGGGG +
Preference number: 3 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFSGRFM*YLAFLG
Trigger: CCCCAAGAAAGCCAAATACAACATAAACCGTCCTGA...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
3UTR GCA 72 bp ATGAATGAACACGACATTTCAAGGACTCAAGCAAAATaGTCTGCAAGTCAAGACTATACACCACTACAATCG +
Preference number: 3 (lower is better)
Translates to: MNEHDISRTQAK*SASQDYTPLQS
Trigger: CGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTGAGTCCTTGAAATGTCGTGTTCATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
3UTR TCA 72 bp TCAGCATTCACAAATCATGTTGACAGTACGTACCCTTaGTATGACCTGATGAAAATGGCACTTTACTTCTGT +
Preference number: 3 (lower is better)
Translates to: SAFTNHVDSTYP*YDLMKMALYFC
Trigger: ACAGAAGTAAAGTGCCATTTTCATCAGGTCATATCAAGGGTACGTACTGTCAACATGATTTGTGAATGCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
3UTR-3UTR CAA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACCATTCACAAATCATGTaGACAGTACGTACCCTTGAT +
Preference number: 3 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYHSQIM*TVRTLD
Trigger: ATCAAGGGTACGTACTGTCAACATGATTTGTGAATG...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
3UTR TCA 72 bp GAAATGTTCAAGCTTTGTTGGAAGTCAGATGTCATATaGCATAATGACACTACTTCATGGAGCAGTCCAATA +
Preference number: 3 (lower is better)
Translates to: EMFKLCWKSDVI*HNDTTSWSSPI
Trigger: TATTGGACTGCTCCATGAAGTAGTGTCATTATGTCATATGACATCTGACTTCCAACAAAGCTTGAACATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR TCA 72 bp AACAAACTCCAAGAGAGGAGCATGCTACAATTTATCTaGCAGTACTCTTCAAAGCTGTCAATGTCATCAAAA +
Preference number: 3 (lower is better)
Translates to: NKLQERSMLQFI*QYSSKLSMSSK
Trigger: TTTTGATGACATTGACAGCTTTGAAGAGTACTGTCAGATAAATTGTAGCATGCTCCTCTCTTGGAGTTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620048.6
3UTR-3UTR CAA 90 bp CAAAATGTCTCCATAGAAGCTTGGATGCAAGATTTAAGTTTGGTTTCCATTTGTTCTTCAGAAGATAACTaGCTTGCTCTTTCAATGTCA +
Preference number: 3 (lower is better)
Translates to: QNVSIEAWMQDLSLVSICSSEDN*LALSMS
Trigger: TGACATTGAAAGAGCAAGCAAGTTATCTTCTGAAGA...ACAAATGGAAACCAAACTTAAATCTTGCATCCAAGCTTCTATGGAGACATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR-3UTR CAA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATATGGAGGAAACTAGATTaGGGGATTCATTTTACATTC +
Preference number: 3 (lower is better)
Translates to: QILKNMTLRHLPEKQMYIWRKLD*GIHFTF
Trigger: GAATGTAAAATGAATCCCCAAATCTAGTTTCCTCCA...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000620048.6
3UTR TCA 72 bp TCTATTGATTATGAGACATTCACAGTGTTCTCCTCTTaGTCAGGAGTCTACTTGTTCACCTTAATTAAGAAA +
Preference number: 3 (lower is better)
Translates to: SIDYETFTVFSS*SGVYLFTLIKK
Trigger: TTTCTTAATTAAGGTGAACAAGTAGACTCCTGATCAAGAGGAGAACACTGTGAATGTCTCATAATCAATAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620048.6
3UTR CAA 72 bp TGGAGGGAGGTGTTTGCCATGGAGGGCACTATCGTCTaGCCCAAGATTCCACTCTGCTTGGTCACCAGAACC +
Preference number: 4 (lower is better)
Translates to: WREVFAMEGTIV*PKIPLCLVTRT
Trigger: GGTTCTGGTGACCAAGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCTCCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CCA 90 bp GGAGGTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTTCCGCTTCCTAGGAGATaGAGGGAGGTGTTTGCCATG +
Preference number: 4 (lower is better)
Translates to: GGVCHGGHYRLAQDSTLLPLPRR*REVFAM
Trigger: CATGGCAAACACCTCCCTCCATCTCCTAGGAAGCGG...AAGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR CAA 72 bp GAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTaGGTCACCAGAACCACCACAGAGGAAAGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: EGTIVLPKIPLC*VTRTTTEESQV
Trigger: AACCTGGCTTTCCTCTGTGGTGGTTCTGGTGACCAAGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR TCA 90 bp GATGAATGCCGCCCAAGACCGGGTATAAGCAGATCATCTGAAATCTGGCTTAGTGCTGCCAGCTTCCCCTaGTCTGAGCTGTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: DECRPRPGISRSSEIWLSAASFP*SELCVL
Trigger: GAGCACACACAGCTCAGATCAGGGGAAGCTGGCAGC...ACTAAGCCAGATTTCAGATGATCTGCTTATACCCGGTCTTGGGCGGCATTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR GCA 90 bp GGGAGGTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTACGATGCGCCTTTCATaGAGCATACTGGCATACAGC +
Preference number: 4 (lower is better)
Translates to: GRCLPWRALSSCPRFHSATMRLS*SILAYS
Trigger: GCTGTATGCCAGTATGCTGCATGAAAGGCGCATCGT...AGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR TCA 90 bp AGGTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTTGGTGGTCATTGCTGTGTTaGACAGTGCACCTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: RCLPWRALSSCPRFHSAWWSLLC*TVHLLS
Trigger: AGAAAGGAGGTGCACTGTTCAACACAGCAATGACCA...CCAAGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR GCA 90 bp GGAGGTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTTACAAAAGTCGATGAATaGCGCCCAAGACCGGGTATA +
Preference number: 4 (lower is better)
Translates to: GGVCHGGHYRLAQDSTLLTKVDE*RPRPGI
Trigger: TATACCCGGTCTTGGGCGGCATTCATCGACTTTTGT...AAGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CCA 90 bp GGGAGGTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTGCCTTTGGTACTGGGTaGTTATACAGTGATCTGAGA +
Preference number: 4 (lower is better)
Translates to: GRCLPWRALSSCPRFHSAAFGTG*LYSDLR
Trigger: TCTCAGATCACTGTATAACCACCCAGTACCAAAGGC...AGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CCA 90 bp GGGAGGTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTTATTCCAATCAGGTATaGCATTGGGGCACAGCAGTA +
Preference number: 4 (lower is better)
Translates to: GRCLPWRALSSCPRFHSAYSNQV*HWGTAV
Trigger: TACTGCTGTGCCCCAATGCCATACCTGATTGGAATA...AGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CCA 90 bp AAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATGCTCACAGCAGCCGTaGCGGCGGGCCCATGTCGGC +
Preference number: 4 (lower is better)
Translates to: KQNALQVKTIHHYNRAKICSQQP*RRAHVG
Trigger: GCCGACATGGGCCCGCCGCCACGGCTGCTGTGAGCA...TATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367396.7
CDS-3UTR TCA 90 bp GGGAGGTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTTTTTCACTCTCTCTATaGGGCTGGAGTGTATTCCAA +
Preference number: 4 (lower is better)
Translates to: GRCLPWRALSSCPRFHSAFSLSL*GWSVFQ
Trigger: TTGGAATACACTCCAGCCTCATAGAGAGAGTGAAAA...AGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR TCA 90 bp GATGAATGCCGCCCAAGACCGGGTATAAGCAGATCATCTGAAATCTGGCTTAGTCAGCTTCCCCTGATCTaGGCTGTGTGTGCTCAATGT +
Preference number: 4 (lower is better)
Translates to: DECRPRPGISRSSEIWLSQLPLI*AVCAQC
Trigger: ACATTGAGCACACACAGCTCAGATCAGGGGAAGCTG...ACTAAGCCAGATTTCAGATGATCTGCTTATACCCGGTCTTGGGCGGCATTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR GCA 90 bp AGGTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTTGGCTCCTGACGTCAGTCTaGAGAATCCAAATCTCTGTT +
Preference number: 4 (lower is better)
Translates to: RCLPWRALSSCPRFHSAWLLTSV*RIQISV
Trigger: AACAGAGATTTGGATTCTGCAGACTGACGTCAGGAG...CCAAGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR GCA 90 bp CATAGAGATAAGCAGAAGCTTCTTCACCATCTTCAGAAGATAACTTGCTTGCTCCACAGGGAAAGAGGCTaGTCACAGCAGCCGTGGCGG +
Preference number: 4 (lower is better)
Translates to: HRDKQKLLHHLQKITCLLHRERG*SQQPWR
Trigger: CCGCCACGGCTGCTGTGAGCAGCCTCTTTCCCTGTG...GAGCAAGCAAGTTATCTTCTGAAGATGGTGAAGAAGCTTCTGCTTATCTCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR GCA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATAACCGGGGCCGCCCGCTaGGGCTCCTGCACCTTCTTG +
Preference number: 4 (lower is better)
Translates to: QILKNMTLRHLPEKQMYITGAAR*GSCTFL
Trigger: CAAGAAGGTGCAGGAGCCGCAGCGGGCGGCCCCGGT...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CCA 90 bp GCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGTTTGTGGTTACATGTCGGTGTaGGGCTGTCCGTCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: ALQVKTIHHYNRAKISVCGYMSV*GCPSGP
Trigger: GGGGCCGGACGGACAGCCCCACACCGACATGTAACC...ACAAACTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp AGGTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTTGGAGAGCAGCTGATCCATaGATACAGGCAGTTAAAGTG +
Preference number: 4 (lower is better)
Translates to: RCLPWRALSSCPRFHSAWRAADP*IQAVKV
Trigger: CACTTTAACTGCCTGTATCCATGGATCAGCTGCTCT...CCAAGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CCA 90 bp GCTTCCCCTGATCTGAGCTGTGTGTGCTCAATGTATCAAGAATCTCTCCTAGTAGGGAGGTGTTTGCCATaGAGGGCACTATCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: ASPDLSCVCSMYQESLLVGRCLP*RALSSC
Trigger: GCAAGACGATAGTGCCCTCCATGGCAAACACCTCCC...TACTAGGAGAGATTCTTGATACATTGAGCACACACAGCTCAGATCAGGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CCA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATATGCTCACAGCAGCCGTaGCGGCGGGCCCATGTCGGC +
Preference number: 4 (lower is better)
Translates to: QILKNMTLRHLPEKQMYICSQQP*RRAHVG
Trigger: GCCGACATGGGCCCGCCGCCACGGCTGCTGTGAGCA...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGACCAGAGCCTTTCTGTaGCAGCAGCGGTGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: KAYRETENSLECLICKQKTRAFL*QQRWRG
Trigger: GCCACGCCACCGCTGCTGTCACAGAAAGGCTCTGGT...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGAGCCGCCACCAAAGCTaGGGCCTCTCAGTTCCTGCG +
Preference number: 4 (lower is better)
Translates to: KAYRETENSLECLICKQKSRHQS*GLSVPA
Trigger: CGCAGGAACTGAGAGGCCTCAGCTTTGGTGGCGGCT...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp GGGAGGTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTCCCGTAGCTGTAGACTaGTTCTTCAGTTTATTTTTC +
Preference number: 4 (lower is better)
Translates to: GRCLPWRALSSCPRFHSAPVAVD*FFSLFF
Trigger: GAAAAATAAACTGAAGAAGCAGTCTACAGCTACGGG...AGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR GCA 90 bp GCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGTTTGTCACAGGGAAAGAGGCTaGTCACAGCAGCCGTGGCGG +
Preference number: 4 (lower is better)
Translates to: ALQVKTIHHYNRAKISVCHRERG*SQQPWR
Trigger: CCGCCACGGCTGCTGTGAGCAGCCTCTTTCCCTGTG...ACAAACTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367396.7
CDS-3UTR GCA 90 bp GGGAGGTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTGATCTGAGCTGTGTGTaGTCAATGTATCAAGAATCT +
Preference number: 4 (lower is better)
Translates to: GRCLPWRALSSCPRFHSADLSCV*SMYQES
Trigger: AGATTCTTGATACATTGAGCACACACAGCTCAGATC...AGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CCA 90 bp TATGACATAATGACACTACTTCATGGAGCAGTCCAATATCTTCTGAAGTCTCTTGGTTACATGTCGGTGTaGGGCTGTCCGTCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: YDIMTLLHGAVQYLLKSLGYMSV*GCPSGP
Trigger: GGGGCCGGACGGACAGCCCCACACCGACATGTAACC...AAGAGACTTCAGAAGATATTGGACTGCTCCATGAAGTAGTGTCATTATGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CCA 90 bp AAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGGGTTACATGTCGGTGTaGGGCTGTCCGTCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: KMLCKSRLYTTTIVQKYQGYMSV*GCPSGP
Trigger: GGGGCCGGACGGACAGCCCCACACCGACATGTAACC...CTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACGGTTACATGTCGGTGTaGGGCTGTCCGTCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYGYMSV*GCPSGP
Trigger: GGGGCCGGACGGACAGCCCCACACCGACATGTAACC...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp TCAAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAAGTGGAGCTGCCGCCATaGAGGTCGAGCTATGCGGTT +
Preference number: 4 (lower is better)
Translates to: SSKMLCKSRLYTTTIVQKVELPP*RSSYAV
Trigger: AACCGCATAGCTCGACCTTCATGGCGGCAGCTCCAC...TTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000235453.8
CDS-3UTR TCA 90 bp GGAGGTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTTAAGCTTACGCTTTTCTaGGTTTCCTCCCTTTTCATT +
Preference number: 4 (lower is better)
Translates to: GGVCHGGHYRLAQDSTLLKLTLF*VSSLFI
Trigger: AATGAAAAGGGAGGAAACTCAGAAAAGCGTAAGCTT...AAGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR GCA 90 bp GATGAATGCCGCCCAAGACCGGGTATAAGCAGATCATCTGAAATCTGGCTTAGTGATTTGCCTTGGTCCTaGAGTCCATGGTTACATGTC +
Preference number: 4 (lower is better)
Translates to: DECRPRPGISRSSEIWLSDLPWS*SPWLHV
Trigger: GACATGTAACCATGGACTGCAGGACCAAGGCAAATC...ACTAAGCCAGATTTCAGATGATCTGCTTATACCCGGTCTTGGGCGGCATTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR GCA 90 bp ACAGCTGCCAATTCAGGAGGCCAACTTAATGCCTTGAGTAACAGGTATCAGGCAAAACAAAGCAGCCTGTaGTCTAAGAAAGGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: TAANSGGQLNALSNRYQAKQSSL*SKKGPS
Trigger: GCTAGGGCCTTTCTTAGAGCACAGGCTGCTTTGTTT...TGCCTGATACCTGTTACTCAAGGCATTAAGTTGGCCTCCTGAATTGGCAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR GCA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTCACAGGGAAAGAGGCTaGTCACAGCAGCCGTGGCGG +
Preference number: 4 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFHRERG*SQQPWR
Trigger: CCGCCACGGCTGCTGTGAGCAGCCTCTTTCCCTGTG...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CCA 90 bp GATGAATGCCGCCCAAGACCGGGTATAAGCAGATCATCTGAAATCTGGCTTAGTTGTCTGGATTTGCCTTaGTCCTGCAGTCCATGGTTA +
Preference number: 4 (lower is better)
Translates to: DECRPRPGISRSSEIWLSCLDLP*SCSPWL
Trigger: TAACCATGGACTGCAGGACCAAGGCAAATCCAGACA...ACTAAGCCAGATTTCAGATGATCTGCTTATACCCGGTCTTGGGCGGCATTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CCA 90 bp ACAGCTGCCAATTCAGGAGGCCAACTTAATGCCTTGAGTAACAGGTATCAGGCAACTCTCGGGTATTGTTaGGAGTCCAGTTACATCAGG +
Preference number: 4 (lower is better)
Translates to: TAANSGGQLNALSNRYQATLGYC*ESSYIR
Trigger: CCTGATGTAACTGGACTCCCAACAATACCCGAGAGT...TGCCTGATACCTGTTACTCAAGGCATTAAGTTGGCCTCCTGAATTGGCAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR TCA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTGCTGCCAGCTTCCCCTaGTCTGAGCTGTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFAASFP*SELCVL
Trigger: GAGCACACACAGCTCAGATCAGGGGAAGCTGGCAGC...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGAGGAACAAAAGTCGATaGATGCCGCCCAAGACCGGG +
Preference number: 4 (lower is better)
Translates to: SRDYVSYFISHILSYCTLRNKSR*MPPKTG
Trigger: CCCGGTCTTGGGCGGCATTCATCGACTTTTGTTCCT...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp ACAGCTGCCAATTCAGGAGGCCAACTTAATGCCTTGAGTAACAGGTATCAGGCACTCCTGACGTCAGTCTaGAGAATCCAAATCTCTGTT +
Preference number: 4 (lower is better)
Translates to: TAANSGGQLNALSNRYQALLTSV*RIQISV
Trigger: AACAGAGATTTGGATTCTGCAGACTGACGTCAGGAG...TGCCTGATACCTGTTACTCAAGGCATTAAGTTGGCCTCCTGAATTGGCAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp TTTCCAGCAATATTAAGAGATTATCGAGGCCAACAGCTGCCAATTCAGGAGGCCGTCAAAGGTTCTGTCTaGATTTGCCTTGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: FPAILRDYRGQQLPIQEAVKGSV*ICLGPA
Trigger: TGCAGGACCAAGGCAAATCCAGACAGAACCTTTGAC...GGCCTCCTGAATTGGCAGCTGTTGGCCTCGATAATCTCTTAATATTGCTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp GATGAATGCCGCCCAAGACCGGGTATAAGCAGATCATCTGAAATCTGGCTTAGTTTTCATGCAGCATACTaGCATACAGCTGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: DECRPRPGISRSSEIWLSFHAAY*HTAAAC
Trigger: ACATGCTGCAGCTGTATGCCAGTATGCTGCATGAAA...ACTAAGCCAGATTTCAGATGATCTGCTTATACCCGGTCTTGGGCGGCATTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CCA 90 bp ACAGCTGCCAATTCAGGAGGCCAACTTAATGCCTTGAGTAACAGGTATCAGGCATTTCATGCAGCATACTaGCATACAGCTGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: TAANSGGQLNALSNRYQAFHAAY*HTAAAC
Trigger: ACATGCTGCAGCTGTATGCCAGTATGCTGCATGAAA...TGCCTGATACCTGTTACTCAAGGCATTAAGTTGGCCTCCTGAATTGGCAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp ACAGCTGCCAATTCAGGAGGCCAACTTAATGCCTTGAGTAACAGGTATCAGGCAAGAGCAGCTGATCCATaGATACAGGCAGTTAAAGTG +
Preference number: 4 (lower is better)
Translates to: TAANSGGQLNALSNRYQARAADP*IQAVKV
Trigger: CACTTTAACTGCCTGTATCCATGGATCAGCTGCTCT...TGCCTGATACCTGTTACTCAAGGCATTAAGTTGGCCTCCTGAATTGGCAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp TTTCCAGCAATATTAAGAGATTATCGAGGCCAACAGCTGCCAATTCAGGAGGCCGTGTGGAGGAAGCACTaGGATGTATATGTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: FPAILRDYRGQQLPIQEAVWRKH*DVYVLP
Trigger: TGGCAACACATATACATCCCAGTGCTTCCTCCACAC...GGCCTCCTGAATTGGCAGCTGTTGGCCTCGATAATCTCTTAATATTGCTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp GCTTCCCCTGATCTGAGCTGTGTGTGCTCAATGTATCAAGAATCTCTCCTAGTAGTGTGGAGGAAGCACTaGGATGTATATGTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: ASPDLSCVCSMYQESLLVVWRKH*DVYVLP
Trigger: TGGCAACACATATACATCCCAGTGCTTCCTCCACAC...TACTAGGAGAGATTCTTGATACATTGAGCACACACAGCTCAGATCAGGGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
3UTR CAA 72 bp AGTTGGAAATCCAGTCCTGAAGTAGGGTCACTCACATaGTCAGCACCGAGGTGCTTGTTACTGTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SWKSSPEVGSLT*SAPRCLLLFSS
Trigger: AGAGGAAAACAGTAACAAGCACCTCGGTGCTGACAATGTGAGTGACCCTACTTCAGGACTGGATTTCCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR TCA 90 bp ACAGCTGCCAATTCAGGAGGCCAACTTAATGCCTTGAGTAACAGGTATCAGGCATTTTCACTCTCTCTATaGGGCTGGAGTGTATTCCAA +
Preference number: 4 (lower is better)
Translates to: TAANSGGQLNALSNRYQAFSLSL*GWSVFQ
Trigger: TTGGAATACACTCCAGCCTCATAGAGAGAGTGAAAA...TGCCTGATACCTGTTACTCAAGGCATTAAGTTGGCCTCCTGAATTGGCAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR TCA 90 bp ACAGCTGCCAATTCAGGAGGCCAACTTAATGCCTTGAGTAACAGGTATCAGGCATCCACAAAAGCCACCTaGAGTGATCTCTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: TAANSGGQLNALSNRYQASTKAT*SDLFFK
Trigger: TTTGAAGAAGAGATCACTTCAGGTGGCTTTTGTGGA...TGCCTGATACCTGTTACTCAAGGCATTAAGTTGGCCTCCTGAATTGGCAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR TCA 90 bp GCTTCCCCTGATCTGAGCTGTGTGTGCTCAATGTATCAAGAATCTCTCCTAGTATTGGAAATCCAGTCCTaGAGTAGGGTCACTCACATT +
Preference number: 4 (lower is better)
Translates to: ASPDLSCVCSMYQESLLVLEIQS*SRVTHI
Trigger: AATGTGAGTGACCCTACTTCAGGACTGGATTTCCAA...TACTAGGAGAGATTCTTGATACATTGAGCACACACAGCTCAGATCAGGGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR GCA 90 bp ATTTCCAGCAATATTAAGAGATTATCGAGGCCAACAGCTGCCAATTCAGGAGGCGATTTGCCTTGGTCCTaGAGTCCATGGTTACATGTC +
Preference number: 4 (lower is better)
Translates to: ISSNIKRLSRPTAANSGGDLPWS*SPWLHV
Trigger: GACATGTAACCATGGACTGCAGGACCAAGGCAAATC...GCCTCCTGAATTGGCAGCTGTTGGCCTCGATAATCTCTTAATATTGCTGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR GCA 90 bp TTTCCAGCAATATTAAGAGATTATCGAGGCCAACAGCTGCCAATTCAGGAGGCCCTCCTGACGTCAGTCTaGAGAATCCAAATCTCTGTT +
Preference number: 4 (lower is better)
Translates to: FPAILRDYRGQQLPIQEALLTSV*RIQISV
Trigger: AACAGAGATTTGGATTCTGCAGACTGACGTCAGGAG...GGCCTCCTGAATTGGCAGCTGTTGGCCTCGATAATCTCTTAATATTGCTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR GCA 90 bp TTTCCAGCAATATTAAGAGATTATCGAGGCCAACAGCTGCCAATTCAGGAGGCCATCACGCTTGAGCGGTaGTTTACAAAACTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: FPAILRDYRGQQLPIQEAITLER*FTKLSS
Trigger: TGAGGAGAGTTTTGTAAAGCACCGCTCAAGCGTGAT...GGCCTCCTGAATTGGCAGCTGTTGGCCTCGATAATCTCTTAATATTGCTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp TCAAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATGGTCCTGCAGTCCATaGTTACATGTCGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SSKMLCKSRLYTTTIVQKWSCSP*LHVGVG
Trigger: CCCCACACCGACATGTAACCATGGACTGCAGGACCA...TTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp TTTCCAGCAATATTAAGAGATTATCGAGGCCAACAGCTGCCAATTCAGGAGGCCGCCTTTGGTACTGGGTaGTTATACAGTGATCTGAGA +
Preference number: 4 (lower is better)
Translates to: FPAILRDYRGQQLPIQEAAFGTG*LYSDLR
Trigger: TCTCAGATCACTGTATAACCACCCAGTACCAAAGGC...GGCCTCCTGAATTGGCAGCTGTTGGCCTCGATAATCTCTTAATATTGCTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp TTTCCAGCAATATTAAGAGATTATCGAGGCCAACAGCTGCCAATTCAGGAGGCCTTTCATGCAGCATACTaGCATACAGCTGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: FPAILRDYRGQQLPIQEAFHAAY*HTAAAC
Trigger: ACATGCTGCAGCTGTATGCCAGTATGCTGCATGAAA...GGCCTCCTGAATTGGCAGCTGTTGGCCTCGATAATCTCTTAATATTGCTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp TTTCCAGCAATATTAAGAGATTATCGAGGCCAACAGCTGCCAATTCAGGAGGCCTATTCCAATCAGGTATaGCATTGGGGCACAGCAGTA +
Preference number: 4 (lower is better)
Translates to: FPAILRDYRGQQLPIQEAYSNQV*HWGTAV
Trigger: TACTGCTGTGCCCCAATGCCATACCTGATTGGAATA...GGCCTCCTGAATTGGCAGCTGTTGGCCTCGATAATCTCTTAATATTGCTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGCCGCTTCCTAGGAGATaGAGGGAGGTGTTTGCCATG +
Preference number: 4 (lower is better)
Translates to: KAYRETENSLECLICKQKPLPRR*REVFAM
Trigger: CATGGCAAACACCTCCCTCCATCTCCTAGGAAGCGG...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS-3UTR CCA 90 bp GATGAATGCCGCCCAAGACCGGGTATAAGCAGATCATCTGAAATCTGGCTTAGTTTTCCTTTATCAGTCTaGGAAACTTCAGGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: DECRPRPGISRSSEIWLSFPLSV*ETSGEV
Trigger: CACTTCCCCTGAAGTTTCCCAGACTGATAAAGGAAA...ACTAAGCCAGATTTCAGATGATCTGCTTATACCCGGTCTTGGGCGGCATTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR TCA 90 bp ACAGCTGCCAATTCAGGAGGCCAACTTAATGCCTTGAGTAACAGGTATCAGGCATGGGTGGTTATACAGTaGTCTGAGAGTTTCATTCAA +
Preference number: 4 (lower is better)
Translates to: TAANSGGQLNALSNRYQAWVVIQ*SESFIQ
Trigger: TTGAATGAAACTCTCAGATCACTGTATAACCACCCA...TGCCTGATACCTGTTACTCAAGGCATTAAGTTGGCCTCCTGAATTGGCAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR TCA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGTCTCCTCACAGAAAGTaGTGGGCTCACCAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: SRDYVSYFISHILSYCTLSPHRK*WAHQVC
Trigger: ACAAACCTGGTGAGCCCATCACTTTCTGTGAGGAGA...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGCAGCTTCCCCTGATCTaGGCTGTGTGTGCTCAATGT +
Preference number: 4 (lower is better)
Translates to: KAYRETENSLECLICKQKQLPLI*AVCAQC
Trigger: ACATTGAGCACACACAGCTCAGATCAGGGGAAGCTG...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS-3UTR TCA 90 bp TATGACATAATGACACTACTTCATGGAGCAGTCCAATATCTTCTGAAGTCTCTTAGGAACAAAAGTCGATaGATGCCGCCCAAGACCGGG +
Preference number: 4 (lower is better)
Translates to: YDIMTLLHGAVQYLLKSLRNKSR*MPPKTG
Trigger: CCCGGTCTTGGGCGGCATTCATCGACTTTTGTTCCT...AAGAGACTTCAGAAGATATTGGACTGCTCCATGAAGTAGTGTCATTATGTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR GCA 90 bp CATAGAGATAAGCAGAAGCTTCTTCACCATCTTCAGAAGATAACTTGCTTGCTCGGTTCTGTCTGGATTTaGCTTGGTCCTGCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: HRDKQKLLHHLQKITCLLGSVWI*LGPAVH
Trigger: ATGGACTGCAGGACCAAGGCAAATCCAGACAGAACC...GAGCAAGCAAGTTATCTTCTGAAGATGGTGAAGAAGCTTCTGCTTATCTCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR GCA 90 bp ACAGCTGCCAATTCAGGAGGCCAACTTAATGCCTTGAGTAACAGGTATCAGGCAAGGACTCAAGCAAAATaGTCTGCAAGTCAAGACTAT +
Preference number: 4 (lower is better)
Translates to: TAANSGGQLNALSNRYQARTQAK*SASQDY
Trigger: ATAGTCTTGACTTGCAGAGCATTTTGCTTGAGTCCT...TGCCTGATACCTGTTACTCAAGGCATTAAGTTGGCCTCCTGAATTGGCAGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR GCA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGATGGAGGGAGGTGTTTaGCATGGAGGGCACTATCGT +
Preference number: 4 (lower is better)
Translates to: KAYRETENSLECLICKQKMEGGV*HGGHYR
Trigger: ACGATAGTGCCCTCCATGGCAAACACCTCCCTCCAT...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS-3UTR CCA 90 bp TTTCCAGCAATATTAAGAGATTATCGAGGCCAACAGCTGCCAATTCAGGAGGCCAGGAGTATTTGCCTTTaGTACTGGGTGGTTATACAG +
Preference number: 4 (lower is better)
Translates to: FPAILRDYRGQQLPIQEARSICL*YWVVIQ
Trigger: CTGTATAACCACCCAGTACCAAAGGCAAATACTCCT...GGCCTCCTGAATTGGCAGCTGTTGGCCTCGATAATCTCTTAATATTGCTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTGGGAGGTGTTTGCCATaGAGGGCACTATCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFGRCLP*RALSSC
Trigger: GCAAGACGATAGTGCCCTCCATGGCAAACACCTCCC...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp TCAAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAAACAAATTGTGCCTCCTaGCGTCAGTCTGCAGAATCC +
Preference number: 4 (lower is better)
Translates to: SSKMLCKSRLYTTTIVQKTNCAS*RQSAES
Trigger: GGATTCTGCAGACTGACGTCAGGAGGCACAATTTGT...TTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR TCA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGACAAATTGTGCCTCCTaGCGTCAGTCTGCAGAATCC +
Preference number: 4 (lower is better)
Translates to: KAYRETENSLECLICKQKTNCAS*RQSAES
Trigger: GGATTCTGCAGACTGACGTCAGGAGGCACAATTTGT...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS-3UTR TCA 90 bp GCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGTTTGTTCTCCTCACAGAAAGTaGTGGGCTCACCAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: ALQVKTIHHYNRAKISVCSPHRK*WAHQVC
Trigger: ACAAACCTGGTGAGCCCATCACTTTCTGTGAGGAGA...ACAAACTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR TCA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACCACCCATTGTTGATATaGCCTCGGGTTCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYHPLLI*PRVPST
Trigger: TGTGGAGGGAACCCGAGGTCATATCAACAATGGGTG...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp TTTCCAGCAATATTAAGAGATTATCGAGGCCAACAGCTGCCAATTCAGGAGGCCTCAAGCAAAATGCTCTaGAAGTCAAGACTATACACC +
Preference number: 4 (lower is better)
Translates to: FPAILRDYRGQQLPIQEASSKML*KSRLYT
Trigger: GGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTGA...GGCCTCCTGAATTGGCAGCTGTTGGCCTCGATAATCTCTTAATATTGCTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR GCA 90 bp CATAGAGATAAGCAGAAGCTTCTTCACCATCTTCAGAAGATAACTTGCTTGCTCGGTTGCTTTGGTCATTaGTGTGTTGAACAGTGCACC +
Preference number: 4 (lower is better)
Translates to: HRDKQKLLHHLQKITCLLGCFGH*CVEQCT
Trigger: GGTGCACTGTTCAACACAGCAATGACCAAAGCAACC...GAGCAAGCAAGTTATCTTCTGAAGATGGTGAAGAAGCTTCTGCTTATCTCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR GCA 90 bp GCTTCCCCTGATCTGAGCTGTGTGTGCTCAATGTATCAAGAATCTCTCCTAGTATTTTGCAAATTTATATaGTGTCCGTACAGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: ASPDLSCVCSMYQESLLVFCKFI*CPYSRG
Trigger: ACCCCTGCTGTACGGACAGCATATAAATTTGCAAAA...TACTAGGAGAGATTCTTGATACATTGAGCACACACAGCTCAGATCAGGGGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR GCA 90 bp CACCATCTTCAGAAGATAACTTGCTTGCTCTTTCAATGTCATCATCATCTTCATCCCAAGATTCCACTCTaGTTGGTCACCAGAACCACC +
Preference number: 4 (lower is better)
Translates to: HHLQKITCLLFQCHHHLHPKIPL*LVTRTT
Trigger: GGTGGTTCTGGTGACCAAGCAGAGTGGAATCTTGGG...ATGAAGATGATGATGACATTGAAAGAGCAAGCAAGTTATCTTCTGAAGATGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR GCA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGAGGGCACTATCGTCTTaGCCAAGATTCCACTCTGCT +
Preference number: 4 (lower is better)
Translates to: KAYRETENSLECLICKQKRALSS*PRFHSA
Trigger: AGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCT...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS-3UTR CCA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGGTCAAAGGTTCTGTCTaGATTTGCCTTGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SRDYVSYFISHILSYCTLVKGSV*ICLGPA
Trigger: TGCAGGACCAAGGCAAATCCAGACAGAACCTTTGAC...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CCA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGACTCTCGGGTATTGTTaGGAGTCCAGTTACATCAGG +
Preference number: 4 (lower is better)
Translates to: SRDYVSYFISHILSYCTLTLGYC*ESSYIR
Trigger: CCTGATGTAACTGGACTCCCAACAATACCCGAGAGT...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CCA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGGTGTGGAGGAAGCACTaGGATGTATATGTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: SRDYVSYFISHILSYCTLVWRKH*DVYVLP
Trigger: TGGCAACACATATACATCCCAGTGCTTCCTCCACAC...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CCA 90 bp GCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAATCAGGTATGGCATTaGGGCACAGCAGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: AKCSASQDYTPLQSCKNINQVWH*GTAVVQ
Trigger: CTGGACTACTGCTGTGCCCCAATGCCATACCTGATT...GATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp GCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGTTTGTAATCAGGTATGGCATTaGGGCACAGCAGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: ALQVKTIHHYNRAKISVCNQVWH*GTAVVQ
Trigger: CTGGACTACTGCTGTGCCCCAATGCCATACCTGATT...ACAAACTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR TCA 90 bp TATGACATAATGACACTACTTCATGGAGCAGTCCAATATCTTCTGAAGTCTCTTACAAATTGTGCCTCCTaGCGTCAGTCTGCAGAATCC +
Preference number: 4 (lower is better)
Translates to: YDIMTLLHGAVQYLLKSLTNCAS*RQSAES
Trigger: GGATTCTGCAGACTGACGTCAGGAGGCACAATTTGT...AAGAGACTTCAGAAGATATTGGACTGCTCCATGAAGTAGTGTCATTATGTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR TCA 90 bp CAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAACAAATTGTGCCTCCTaGCGTCAGTCTGCAGAATCC +
Preference number: 4 (lower is better)
Translates to: QNALQVKTIHHYNRAKISTNCAS*RQSAES
Trigger: GGATTCTGCAGACTGACGTCAGGAGGCACAATTTGT...TGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR TCA 90 bp CATAGAGATAAGCAGAAGCTTCTTCACCATCTTCAGAAGATAACTTGCTTGCTCTTACATCAGGGGCAATaGAGTAGGAATGCACACTCA +
Preference number: 4 (lower is better)
Translates to: HRDKQKLLHHLQKITCLLLHQGQ*SRNAHS
Trigger: TGAGTGTGCATTCCTACTTCATTGCCCCTGATGTAA...GAGCAAGCAAGTTATCTTCTGAAGATGGTGAAGAAGCTTCTGCTTATCTCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR TCA 90 bp AAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGTCTCCTCACAGAAAGTaGTGGGCTCACCAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: KMLCKSRLYTTTIVQKYQSPHRK*WAHQVC
Trigger: ACAAACCTGGTGAGCCCATCACTTTCTGTGAGGAGA...CTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR TCA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGCTGTTTCATCACGCTTaGGCGGTGCTTTACAAAACT +
Preference number: 4 (lower is better)
Translates to: SRDYVSYFISHILSYCTLLFHHA*AVLYKT
Trigger: AGTTTTGTAAAGCACCGCTCAAGCGTGATGAAACAG...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp TTTCCAGCAATATTAAGAGATTATCGAGGCCAACAGCTGCCAATTCAGGAGGCCTCAGCAAATAATGAATaGACACGACATTTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: FPAILRDYRGQQLPIQEASANNE*TRHFKD
Trigger: GTCCTTGAAATGTCGTGTTCATTCATTATTTGCTGA...GGCCTCCTGAATTGGCAGCTGTTGGCCTCGATAATCTCTTAATATTGCTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR TCA 90 bp CACCATCTTCAGAAGATAACTTGCTTGCTCTTTCAATGTCATCATCATCTTCATGTATGCACCCATTGTTaGTATGACCTCGGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: HHLQKITCLLFQCHHHLHVCTHC*YDLGFQ
Trigger: CTGGAACCCGAGGTCATATCAACAATGGGTGCATAC...ATGAAGATGATGATGACATTGAAAGAGCAAGCAAGTTATCTTCTGAAGATGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR TCA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGTGGTCATTGCTGTGTTaGACAGTGCACCTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: KAYRETENSLECLICKQKWSLLC*TVHLLS
Trigger: AGAAAGGAGGTGCACTGTTCAACACAGCAATGACCA...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS-3UTR TCA 90 bp TCAAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAAGGTACTAGAGCAGGCTaGTCTTTCAGAACTTGCTCA +
Preference number: 4 (lower is better)
Translates to: SSKMLCKSRLYTTTIVQKGTRAG*SFRTCS
Trigger: TGAGCAAGTTCTGAAAGATCAGCCTGCTCTAGTACC...TTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367396.7
CDS-3UTR TCA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGGGTACTAGAGCAGGCTaGTCTTTCAGAACTTGCTCA +
Preference number: 4 (lower is better)
Translates to: KAYRETENSLECLICKQKGTRAG*SFRTCS
Trigger: TGAGCAAGTTCTGAAAGATCAGCCTGCTCTAGTACC...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACGTATGCACCCATTGTTaGTATGACCTCGGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYVCTHC*YDLGFP
Trigger: AGGGAACCCGAGGTCATATCAACAATGGGTGCATAC...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGACAGTGTTCTCCTCTTaGTCAGGAGTCTACTTGTTC +
Preference number: 4 (lower is better)
Translates to: SRDYVSYFISHILSYCTLTVFSS*SGVYLF
Trigger: GAACAAGTAGACTCCTGATCAAGAGGAGAACACTGT...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp AAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGGGTTCTGTCTGGATTTaGCTTGGTCCTGCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: KMLCKSRLYTTTIVQKYQGSVWI*LGPAVH
Trigger: ATGGACTGCAGGACCAAGGCAAATCCAGACAGAACC...CTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR GCA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGCTCCTGACGTCAGTCTaGAGAATCCAAATCTCTGTT +
Preference number: 4 (lower is better)
Translates to: SRDYVSYFISHILSYCTLLLTSV*RIQISV
Trigger: AACAGAGATTTGGATTCTGCAGACTGACGTCAGGAG...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp AAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATAACGATGCGCCTTTCATaGAGCATACTGGCATACAGC +
Preference number: 4 (lower is better)
Translates to: KQNALQVKTIHHYNRAKITMRLS*SILAYS
Trigger: GCTGTATGCCAGTATGCTGCATGAAAGGCGCATCGT...TATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR GCA 90 bp AAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGACGATGCGCCTTTCATaGAGCATACTGGCATACAGC +
Preference number: 4 (lower is better)
Translates to: KMLCKSRLYTTTIVQKYQTMRLS*SILAYS
Trigger: GCTGTATGCCAGTATGCTGCATGAAAGGCGCATCGT...CTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR GCA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTACGATGCGCCTTTCATaGAGCATACTGGCATACAGC +
Preference number: 4 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFTMRLS*SILAYS
Trigger: GCTGTATGCCAGTATGCTGCATGAAAGGCGCATCGT...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp ATTTCCAGCAATATTAAGAGATTATCGAGGCCAACAGCTGCCAATTCAGGAGGCAGGACTCAAGCAAAATaGTCTGCAAGTCAAGACTAT +
Preference number: 4 (lower is better)
Translates to: ISSNIKRLSRPTAANSGGRTQAK*SASQDY
Trigger: ATAGTCTTGACTTGCAGAGCATTTTGCTTGAGTCCT...GCCTCCTGAATTGGCAGCTGTTGGCCTCGATAATCTCTTAATATTGCTGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR GCA 90 bp CACCATCTTCAGAAGATAACTTGCTTGCTCTTTCAATGTCATCATCATCTTCATCCGTACAGCAGGGGTTaGTTTGGTCATTGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: HHLQKITCLLFQCHHHLHPYSRG*FGHCCV
Trigger: AACACAGCAATGACCAAAGCAACCCCTGCTGTACGG...ATGAAGATGATGATGACATTGAAAGAGCAAGCAAGTTATCTTCTGAAGATGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR GCA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACCCGTACAGCAGGGGTTaGTTTGGTCATTGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYPYSRG*FGHCCV
Trigger: AACACAGCAATGACCAAAGCAACCCCTGCTGTACGG...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp GATGAATGCCGCCCAAGACCGGGTATAAGCAGATCATCTGAAATCTGGCTTAGTCTTCAGAAGATAACTTaGTTGCTCTTTCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: DECRPRPGISRSSEIWLSLQKIT*LLFQCH
Trigger: ATGACATTGAAAGAGCAAGCAAGTTATCTTCTGAAG...ACTAAGCCAGATTTCAGATGATCTGCTTATACCCGGTCTTGGGCGGCATTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR GCA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATACCCAAGATTCCACTCTaGTTGGTCACCAGAACCACC +
Preference number: 4 (lower is better)
Translates to: QILKNMTLRHLPEKQMYIPKIPL*LVTRTT
Trigger: GGTGGTTCTGGTGACCAAGCAGAGTGGAATCTTGGG...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACAGGGCACTATCGTCTTaGCCAAGATTCCACTCTGCT +
Preference number: 4 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYRALSS*PRFHSA
Trigger: AGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCT...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp CAAAATGTCTCCATAGAAGCTTGGATGCAAGATTTAAGTTTGGTTTCCATTTGTATGGAGGGAGGTGTTTaGCATGGAGGGCACTATCGT +
Preference number: 4 (lower is better)
Translates to: QNVSIEAWMQDLSLVSICMEGGV*HGGHYR
Trigger: ACGATAGTGCCCTCCATGGCAAACACCTCCCTCCAT...ACAAATGGAAACCAAACTTAAATCTTGCATCCAAGCTTCTATGGAGACATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CCA 90 bp GCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCTGTCTGGATTTGCCTTaGTCCTGCAGTCCATGGTTA +
Preference number: 4 (lower is better)
Translates to: AKCSASQDYTPLQSCKNICLDLP*SCSPWL
Trigger: TAACCATGGACTGCAGGACCAAGGCAAATCCAGACA...GATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGTGTCTGGATTTGCCTTaGTCCTGCAGTCCATGGTTA +
Preference number: 4 (lower is better)
Translates to: KAYRETENSLECLICKQKCLDLP*SCSPWL
Trigger: TAACCATGGACTGCAGGACCAAGGCAAATCCAGACA...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS-3UTR CCA 90 bp CAAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATGTCAAAGGTTCTGTCTaGATTTGCCTTGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QAKCSASQDYTPLQSCKNVKGSV*ICLGPA
Trigger: TGCAGGACCAAGGCAAATCCAGACAGAACCTTTGAC...ATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp GCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGTTTGTACTCTCGGGTATTGTTaGGAGTCCAGTTACATCAGG +
Preference number: 4 (lower is better)
Translates to: ALQVKTIHHYNRAKISVCTLGYC*ESSYIR
Trigger: CCTGATGTAACTGGACTCCCAACAATACCCGAGAGT...ACAAACTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp TCAAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAAGTGTGGAGGAAGCACTaGGATGTATATGTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: SSKMLCKSRLYTTTIVQKVWRKH*DVYVLP
Trigger: TGGCAACACATATACATCCCAGTGCTTCCTCCACAC...TTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp GCTTCCCCTGATCTGAGCTGTGTGTGCTCAATGTATCAAGAATCTCTCCTAGTAGTCTCCATAGAAGCTTaGATGCAAGATTTAAGTTTG +
Preference number: 4 (lower is better)
Translates to: ASPDLSCVCSMYQESLLVVSIEA*MQDLSL
Trigger: CAAACTTAAATCTTGCATCCAAGCTTCTATGGAGAC...TACTAGGAGAGATTCTTGATACATTGAGCACACACAGCTCAGATCAGGGGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CCA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGTGTATTTGGCTTTCTTaGGGTGGACCCCTAAATAGC +
Preference number: 4 (lower is better)
Translates to: SRDYVSYFISHILSYCTLCIWLS*GGPLNS
Trigger: GCTATTTAGGGGTCCACCCCAAGAAAGCCAAATACA...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp GCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGTTTGTCTGTTTCATCACGCTTaGGCGGTGCTTTACAAAACT +
Preference number: 4 (lower is better)
Translates to: ALQVKTIHHYNRAKISVCLFHHA*AVLYKT
Trigger: AGTTTTGTAAAGCACCGCTCAAGCGTGATGAAACAG...ACAAACTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR TCA 90 bp CAAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATGCCAACTTAATGCCTTaGGTAACAGGTATCAGGCAA +
Preference number: 4 (lower is better)
Translates to: QAKCSASQDYTPLQSCKNANLMP*VTGIRQ
Trigger: TTGCCTGATACCTGTTACTCAAGGCATTAAGTTGGC...ATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR TCA 90 bp ATTTCCAGCAATATTAAGAGATTATCGAGGCCAACAGCTGCCAATTCAGGAGGCTCAGCAAATAATGAATaGACACGACATTTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: ISSNIKRLSRPTAANSGGSANNE*TRHFKD
Trigger: GTCCTTGAAATGTCGTGTTCATTCATTATTTGCTGA...GCCTCCTGAATTGGCAGCTGTTGGCCTCGATAATCTCTTAATATTGCTGGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR TCA 90 bp CAAAATGTCTCCATAGAAGCTTGGATGCAAGATTTAAGTTTGGTTTCCATTTGTCACCCATTGTTGATATaGCCTCGGGTTCCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: QNVSIEAWMQDLSLVSICHPLLI*PRVPGL
Trigger: CAAACCTGGAACCCGAGGTCATATCAACAATGGGTG...ACAAATGGAAACCAAACTTAAATCTTGCATCCAAGCTTCTATGGAGACATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR TCA 90 bp TATGACATAATGACACTACTTCATGGAGCAGTCCAATATCTTCTGAAGTCTCTTGTGCACCTCCTTTCTTaGCTGTATGCACCCATTGTT +
Preference number: 4 (lower is better)
Translates to: YDIMTLLHGAVQYLLKSLVHLLS*LYAPIV
Trigger: AACAATGGGTGCATACAGTCAAGAAAGGAGGTGCAC...AAGAGACTTCAGAAGATATTGGACTGCTCCATGAAGTAGTGTCATTATGTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR TCA 90 bp CAAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATTTACATCAGGGGCAATaGAGTAGGAATGCGGTACTA +
Preference number: 4 (lower is better)
Translates to: QAKCSASQDYTPLQSCKNLHQGQ*SRNAVL
Trigger: TAGTACCGCATTCCTACTTCATTGCCCCTGATGTAA...ATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367396.7
CDS-3UTR GCA 90 bp ATTTCCAGCAATATTAAGAGATTATCGAGGCCAACAGCTGCCAATTCAGGAGGCGGGATGTATATGTGTTaGCAATACATTGGGTATAGA +
Preference number: 4 (lower is better)
Translates to: ISSNIKRLSRPTAANSGGGMYMC*QYIGYR
Trigger: TCTATACCCAATGTATTGGCAACACATATACATCCC...GCCTCCTGAATTGGCAGCTGTTGGCCTCGATAATCTCTTAATATTGCTGGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR GCA 90 bp CAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAAAACAAAGCAGCCTGTaGTCTAAGAAAGGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: QNALQVKTIHHYNRAKISKQSSL*SKKGPS
Trigger: GCTAGGGCCTTTCTTAGAGCACAGGCTGCTTTGTTT...TGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR GCA 90 bp CACCATCTTCAGAAGATAACTTGCTTGCTCTTTCAATGTCATCATCATCTTCATAAACAAAGCAGCCTGTaGTCTAAGAAAGGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: HHLQKITCLLFQCHHHLHKQSSL*SKKGPS
Trigger: GCTAGGGCCTTTCTTAGAGCACAGGCTGCTTTGTTT...ATGAAGATGATGATGACATTGAAAGAGCAAGCAAGTTATCTTCTGAAGATGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR GCA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTAAACAAAGCAGCCTGTaGTCTAAGAAAGGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFKQSSL*SKKGPS
Trigger: GCTAGGGCCTTTCTTAGAGCACAGGCTGCTTTGTTT...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGATCACGCTTGAGCGGTaGTTTACAAAACTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: KAYRETENSLECLICKQKITLER*FTKLSS
Trigger: TGAGGAGAGTTTTGTAAAGCACCGCTCAAGCGTGAT...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACGGTTGCTTTGGTCATTaGTGTGTTGAACAGTGCACC +
Preference number: 4 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYGCFGH*CVEQCT
Trigger: GGTGCACTGTTCAACACAGCAATGACCAAAGCAACC...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGTTGTCAGCACCGAGGTaGTTGTTACTGTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KAYRETENSLECLICKQKLSAPR*LLLFSS
Trigger: AGAGGAAAACAGTAACAAGCACCTCGGTGCTGACAA...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS-3UTR GCA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACACAAAAGTCGATGAATaGCGCCCAAGACCGGGTATA +
Preference number: 4 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYTKVDE*RPRPGI
Trigger: TATACCCGGTCTTGGGCGGCATTCATCGACTTTTGT...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGGGATTCCCATTAACATaGATCCACACCTTCAGTTAC +
Preference number: 4 (lower is better)
Translates to: SRDYVSYFISHILSYCTLGFPLT*IHTFSY
Trigger: GTAACTGAAGGTGTGGATGCATGTTAATGGGAATCC...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CCA 90 bp AAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGTGTCTGGATTTGCCTTaGTCCTGCAGTCCATGGTTA +
Preference number: 4 (lower is better)
Translates to: KMLCKSRLYTTTIVQKYQCLDLP*SCSPWL
Trigger: TAACCATGGACTGCAGGACCAAGGCAAATCCAGACA...CTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp TATGACATAATGACACTACTTCATGGAGCAGTCCAATATCTTCTGAAGTCTCTTGTCAAAGGTTCTGTCTaGATTTGCCTTGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: YDIMTLLHGAVQYLLKSLVKGSV*ICLGPA
Trigger: TGCAGGACCAAGGCAAATCCAGACAGAACCTTTGAC...AAGAGACTTCAGAAGATATTGGACTGCTCCATGAAGTAGTGTCATTATGTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CCA 90 bp GCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGTTTGTTTCGAAAATACAGGTTaGGGCCATCTTTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ALQVKTIHHYNRAKISVCFENTG*GHLFSS
Trigger: GGAGGAGAAAAGATGGCCCCAACCTGTATTTTCGAA...ACAAACTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000235453.8
CDS-3UTR CCA 90 bp CAAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATGCCTTTGGTACTGGGTaGTTATACAGTGATCTGAGA +
Preference number: 4 (lower is better)
Translates to: QAKCSASQDYTPLQSCKNAFGTG*LYSDLR
Trigger: TCTCAGATCACTGTATAACCACCCAGTACCAAAGGC...ATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp CACCATCTTCAGAAGATAACTTGCTTGCTCTTTCAATGTCATCATCATCTTCATACTCTCGGGTATTGTTaGGAGTCCAGTTACATCAGG +
Preference number: 4 (lower is better)
Translates to: HHLQKITCLLFQCHHHLHTLGYC*ESSYIR
Trigger: CCTGATGTAACTGGACTCCCAACAATACCCGAGAGT...ATGAAGATGATGATGACATTGAAAGAGCAAGCAAGTTATCTTCTGAAGATGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CCA 90 bp CAAAATGTCTCCATAGAAGCTTGGATGCAAGATTTAAGTTTGGTTTCCATTTGTAATCAGGTATGGCATTaGGGCACAGCAGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: QNVSIEAWMQDLSLVSICNQVWH*GTAVVQ
Trigger: CTGGACTACTGCTGTGCCCCAATGCCATACCTGATT...ACAAATGGAAACCAAACTTAAATCTTGCATCCAAGCTTCTATGGAGACATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CCA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATAAATCAGGTATGGCATTaGGGCACAGCAGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: QILKNMTLRHLPEKQMYINQVWH*GTAVVQ
Trigger: CTGGACTACTGCTGTGCCCCAATGCCATACCTGATT...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CCA 90 bp CAAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATTATTCCAATCAGGTATaGCATTGGGGCACAGCAGTA +
Preference number: 4 (lower is better)
Translates to: QAKCSASQDYTPLQSCKNYSNQV*HWGTAV
Trigger: TACTGCTGTGCCCCAATGCCATACCTGATTGGAATA...ATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGTCAGGGGAAGTGAGTTaGAAATCCAGTCCTGAAGTA +
Preference number: 4 (lower is better)
Translates to: KAYRETENSLECLICKQKSGEVS*KSSPEV
Trigger: TACTTCAGGACTGGATTTCCAACTCACTTCCCCTGA...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS-3UTR TCA 90 bp CATAGAGATAAGCAGAAGCTTCTTCACCATCTTCAGAAGATAACTTGCTTGCTCTGGGTGGTTATACAGTaGTCTGAGAGTTTCATTCAA +
Preference number: 4 (lower is better)
Translates to: HRDKQKLLHHLQKITCLLWVVIQ*SESFIQ
Trigger: TTGAATGAAACTCTCAGATCACTGTATAACCACCCA...GAGCAAGCAAGTTATCTTCTGAAGATGGTGAAGAAGCTTCTGCTTATCTCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR TCA 90 bp AAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGTTACATCAGGGGCAATaGAGTAGGAATGCACACTCA +
Preference number: 4 (lower is better)
Translates to: KMLCKSRLYTTTIVQKYQLHQGQ*SRNAHS
Trigger: TGAGTGTGCATTCCTACTTCATTGCCCCTGATGTAA...CTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000235453.8
CDS-3UTR TCA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGTTTTCACTCTCTCTATaGGGCTGGAGTGTATTCCAA +
Preference number: 4 (lower is better)
Translates to: KAYRETENSLECLICKQKFSLSL*GWSVFQ
Trigger: TTGGAATACACTCCAGCCTCATAGAGAGAGTGAAAA...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS-3UTR TCA 90 bp CAAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATTCCACAAAAGCCACCTaGAGTGATCTCTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: QAKCSASQDYTPLQSCKNSTKAT*SDLFFK
Trigger: TTTGAAGAAGAGATCACTTCAGGTGGCTTTTGTGGA...ATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR TCA 90 bp AAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGGCCAACTTAATGCCTTaGGTAACAGGTATCAGGCAA +
Preference number: 4 (lower is better)
Translates to: KMLCKSRLYTTTIVQKYQANLMP*VTGIRQ
Trigger: TTGCCTGATACCTGTTACTCAAGGCATTAAGTTGGC...CTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR TCA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATAGTGCACCTCCTTTCTTaGCTGTATGCACCCATTGTT +
Preference number: 4 (lower is better)
Translates to: QILKNMTLRHLPEKQMYIVHLLS*LYAPIV
Trigger: AACAATGGGTGCATACAGTCAAGAAAGGAGGTGCAC...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTTTGGAAATCCAGTCCTaGAGTAGGGTCACTCACATT +
Preference number: 4 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFLEIQS*SRVTHI
Trigger: AATGTGAGTGACCCTACTTCAGGACTGGATTTCCAA...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp CAAAATGTCTCCATAGAAGCTTGGATGCAAGATTTAAGTTTGGTTTCCATTTGTAAACTTCAGGGGAAGTaGGTTGGAAATCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: QNVSIEAWMQDLSLVSICKLQGK*VGNPVL
Trigger: CAGGACTGGATTTCCAACTCACTTCCCCTGAAGTTT...ACAAATGGAAACCAAACTTAAATCTTGCATCCAAGCTTCTATGGAGACATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR TCA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATAAAACTTCAGGGGAAGTaGGTTGGAAATCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: QILKNMTLRHLPEKQMYIKLQGK*VGNPVL
Trigger: CAGGACTGGATTTCCAACTCACTTCCCCTGAAGTTT...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp CATAGAGATAAGCAGAAGCTTCTTCACCATCTTCAGAAGATAACTTGCTTGCTCCAGTCCAATATCTTCTaGAGTCTCTTTGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: HRDKQKLLHHLQKITCLLQSNIF*SLFGFF
Trigger: AAAGAAGCCAAAGAGACTTCAGAAGATATTGGACTG...GAGCAAGCAAGTTATCTTCTGAAGATGGTGAAGAAGCTTCTGCTTATCTCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR TCA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACTTACATCAGGGGCAATaGAGTAGGAATGCGGTACTA +
Preference number: 4 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYLHQGQ*SRNAVL
Trigger: TAGTACCGCATTCCTACTTCATTGCCCCTGATGTAA...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTATTCAGAAAGAACCATaGCTCCATTGCAGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFIQKEP*LHCRPD
Trigger: ATCTGGCCTGCAATGGAGTCATGGTTCTTTCTGAAT...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGACTGTACCCTGCATATaGCTGGTACAAAAAGTCAAT +
Preference number: 4 (lower is better)
Translates to: SRDYVSYFISHILSYCTLTVPCI*LVQKVN
Trigger: ATTGACTTTTTGTACCAGTCATATGCAGGGTACAGT...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATAGATTTGCCTTGGTCCTaGAGTCCATGGTTACATGTC +
Preference number: 4 (lower is better)
Translates to: QILKNMTLRHLPEKQMYIDLPWS*SPWLHV
Trigger: GACATGTAACCATGGACTGCAGGACCAAGGCAAATC...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp AAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATAATCACGCTTGAGCGGTaGTTTACAAAACTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: KQNALQVKTIHHYNRAKIITLER*FTKLSS
Trigger: TGAGGAGAGTTTTGTAAAGCACCGCTCAAGCGTGAT...TATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR GCA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGTTTTGCAAATTTATATaGTGTCCGTACAGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: SRDYVSYFISHILSYCTLFCKFI*CPYSRG
Trigger: ACCCCTGCTGTACGGACAGCATATAAATTTGCAAAA...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp TATGACATAATGACACTACTTCATGGAGCAGTCCAATATCTTCTGAAGTCTCTTTTGTCAGCACCGAGGTaGTTGTTACTGTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: YDIMTLLHGAVQYLLKSLLSAPR*LLLFSS
Trigger: AGAGGAAAACAGTAACAAGCACCTCGGTGCTGACAA...AAGAGACTTCAGAAGATATTGGACTGCTCCATGAAGTAGTGTCATTATGTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CCA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACTTTCATGCAGCATACTaGCATACAGCTGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYFHAAY*HTAAAC
Trigger: ACATGCTGCAGCTGTATGCCAGTATGCTGCATGAAA...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CCA 90 bp AAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGAGAGCAGCTGATCCATaGATACAGGCAGTTAAAGTG +
Preference number: 4 (lower is better)
Translates to: KMLCKSRLYTTTIVQKYQRAADP*IQAVKV
Trigger: CACTTTAACTGCCTGTATCCATGGATCAGCTGCTCT...CTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACAGAGCAGCTGATCCATaGATACAGGCAGTTAAAGTG +
Preference number: 4 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYRAADP*IQAVKV
Trigger: CACTTTAACTGCCTGTATCCATGGATCAGCTGCTCT...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CCA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTTATTCCAATCAGGTATaGCATTGGGGCACAGCAGTA +
Preference number: 4 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFYSNQV*HWGTAV
Trigger: TACTGCTGTGCCCCAATGCCATACCTGATTGGAATA...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CCA 90 bp CACCATCTTCAGAAGATAACTTGCTTGCTCTTTCAATGTCATCATCATCTTCATTCAGGGGAAGTGAGTTaGAAATCCAGTCCTGAAGTA +
Preference number: 4 (lower is better)
Translates to: HHLQKITCLLFQCHHHLHSGEVS*KSSPEV
Trigger: TACTTCAGGACTGGATTTCCAACTCACTTCCCCTGA...ATGAAGATGATGATGACATTGAAAGAGCAAGCAAGTTATCTTCTGAAGATGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CCA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGTTTCCTTTATCAGTCTaGGAAACTTCAGGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: KAYRETENSLECLICKQKFPLSV*ETSGEV
Trigger: CACTTCCCCTGAAGTTTCCCAGACTGATAAAGGAAA...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS-3UTR CCA 90 bp CACCATCTTCAGAAGATAACTTGCTTGCTCTTTCAATGTCATCATCATCTTCATTGTATTTGGCTTTCTTaGGGTGGACCCCTAAATAGC +
Preference number: 4 (lower is better)
Translates to: HHLQKITCLLFQCHHHLHCIWLS*GGPLNS
Trigger: GCTATTTAGGGGTCCACCCCAAGAAAGCCAAATACA...ATGAAGATGATGATGACATTGAAAGAGCAAGCAAGTTATCTTCTGAAGATGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR TCA 90 bp GCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGTTTGTTGGGTGGTTATACAGTaGTCTGAGAGTTTCATTCAA +
Preference number: 4 (lower is better)
Translates to: ALQVKTIHHYNRAKISVCWVVIQ*SESFIQ
Trigger: TTGAATGAAACTCTCAGATCACTGTATAACCACCCA...ACAAACTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR TCA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGTGGGTGGTTATACAGTaGTCTGAGAGTTTCATTCAA +
Preference number: 4 (lower is better)
Translates to: KAYRETENSLECLICKQKWVVIQ*SESFIQ
Trigger: TTGAATGAAACTCTCAGATCACTGTATAACCACCCA...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS-3UTR TCA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACTCCACAAAAGCCACCTaGAGTGATCTCTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYSTKAT*SDLFFK
Trigger: TTTGAAGAAGAGATCACTTCAGGTGGCTTTTGTGGA...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGAGTGGCTCTAAGTATTaGAAAGGAGCATCATTCCAT +
Preference number: 4 (lower is better)
Translates to: KAYRETENSLECLICKQKSGSKY*KGASFH
Trigger: ATGGAATGATGCTCCTTTTCAATACTTAGAGCCACT...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGATACAAATGCCATTTTaGTTTAGGTGGTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: SRDYVSYFISHILSYCTLIQMPF*FRWCRT
Trigger: AGTTCTGCACCACCTAAATCAAAATGGCATTTGTAT...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp GCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCATTTACAGGAGTATTTaGCTTTGGTACTGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: AKCSASQDYTPLQSCKNIIYRSI*LWYWVV
Trigger: AACCACCCAGTACCAAAGGCAAATACTCCTGTAAAT...GATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR GCA 90 bp CAAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATTTACAGGAGTATTTaGCTTTGGTACTGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: QAKCSASQDYTPLQSCKNIYRSI*LWYWVV
Trigger: AACCACCCAGTACCAAAGGCAAATACTCCTGTAAAT...ATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR GCA 90 bp GCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGTTTGTTCAAGCAAAATGCTCTaGAAGTCAAGACTATACACC +
Preference number: 4 (lower is better)
Translates to: ALQVKTIHHYNRAKISVCSSKML*KSRLYT
Trigger: GGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTGA...ACAAACTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR GCA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGACCAAATTTGACCCATaGTACACTCACAGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: SRDYVSYFISHILSYCTLTKFDP*YTHSCF
Trigger: AAAACAACTGTGAGTGTAGCATGGGTCAAATTTGGT...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTGGTATGTCTGCATGTTaGATCCAGAGCTACAGATTT +
Preference number: 4 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFGMSAC*IQSYRF
Trigger: AAATCTGTAGCTCTGGATGCAACATGCAGACATACC...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CCA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATAGCCTTTGGTACTGGGTaGTTATACAGTGATCTGAGA +
Preference number: 4 (lower is better)
Translates to: QILKNMTLRHLPEKQMYIAFGTG*LYSDLR
Trigger: TCTCAGATCACTGTATAACCACCCAGTACCAAAGGC...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CCA 90 bp AAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATAAGGAGTATTTGCCTTTaGTACTGGGTGGTTATACAG +
Preference number: 4 (lower is better)
Translates to: KQNALQVKTIHHYNRAKIRSICL*YWVVIQ
Trigger: CTGTATAACCACCCAGTACCAAAGGCAAATACTCCT...TATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp CACCATCTTCAGAAGATAACTTGCTTGCTCTTTCAATGTCATCATCATCTTCATAGGAGTATTTGCCTTTaGTACTGGGTGGTTATACAG +
Preference number: 4 (lower is better)
Translates to: HHLQKITCLLFQCHHHLHRSICL*YWVVIQ
Trigger: CTGTATAACCACCCAGTACCAAAGGCAAATACTCCT...ATGAAGATGATGATGACATTGAAAGAGCAAGCAAGTTATCTTCTGAAGATGGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CCA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGTTAAGCACCAAACACTaGGAAATCTCATGGTCAATA +
Preference number: 4 (lower is better)
Translates to: SRDYVSYFISHILSYCTLLSTKH*EISWSI
Trigger: TATTGACCATGAGATTTCCCAGTGTTTGGTGCTTAA...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CCA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTAGTAACAGGGGTAGATaGGAACTCTCTGTACTATCT +
Preference number: 4 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFSNRGR*ELSVLS
Trigger: AGATAGTACAGAGAGTTCCCATCTACCCCTGTTACT...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGAAAAGCCACCTGAAGTaGTCTCTTCTTCAAATACAT +
Preference number: 4 (lower is better)
Translates to: KAYRETENSLECLICKQKKSHLK*SLLQIH
Trigger: ATGTATTTGAAGAAGAGATCACTTCAGGTGGCTTTT...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTAAGCTTACGCTTTTCTaGGTTTCCTCCCTTTTCATT +
Preference number: 4 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFKLTLF*VSSLFI
Trigger: AATGAAAAGGGAGGAAACTCAGAAAAGCGTAAGCTT...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGCTCGAAATGAACAAGTaGGAAAAATGTTGCAAATGC +
Preference number: 4 (lower is better)
Translates to: KAYRETENSLECLICKQKLEMNK*EKCCKC
Trigger: GCATTTGCAACATTTTTCTCACTTGTTCATTTCGAG...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS-3UTR TCA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTATTTCTCTATACCCCTaGAATACCACGGATGCAATA +
Preference number: 4 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFISLYP*NTTDAI
Trigger: TATTGCATCCGTGGTATTTCAGGGGTATAGAGAAAT...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACCAATATTACTGGGTTTaGCCCAGGAACATTAGTACT +
Preference number: 4 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYQYYWV*PRNIST
Trigger: AGTACTAATGTTCCTGGGTCAAACCCAGTAATATTG...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTTCAAATCACGTTAACTaGCTTGCTCAAAACCACTCT +
Preference number: 4 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFSNHVN*LAQNHS
Trigger: AGAGTGGTTTTGAGCAAGTCAGTTAACGTGATTTGA...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp GCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGTTTGTTTTCTTAATGCAAAATaGGAATCGGCGTACTTTTCC +
Preference number: 4 (lower is better)
Translates to: ALQVKTIHHYNRAKISVCFLNAK*ESAYFS
Trigger: GGAAAAGTACGCCGATTCGCATTTTGCATTAAGAAA...ACAAACTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000235453.8
CDS-3UTR GCA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTATTTACAGGAGTATTTaGCTTTGGTACTGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFIYRSI*LWYWVV
Trigger: AACCACCCAGTACCAAAGGCAAATACTCCTGTAAAT...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGGGGATGTATATGTGTTaGCAATACATTGGGTATAGA +
Preference number: 4 (lower is better)
Translates to: KAYRETENSLECLICKQKGMYMC*QYIGYR
Trigger: TCTATACCCAATGTATTGGCAACACATATACATCCC...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS-3UTR GCA 90 bp AAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATACCCGTAGCTGTAGACTaGTTCTTCAGTTTATTTTTC +
Preference number: 4 (lower is better)
Translates to: KQNALQVKTIHHYNRAKIPVAVD*FFSLFF
Trigger: GAAAAATAAACTGAAGAAGCAGTCTACAGCTACGGG...TATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR GCA 90 bp CAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCACCCGTAGCTGTAGACTaGTTCTTCAGTTTATTTTTC +
Preference number: 4 (lower is better)
Translates to: QNALQVKTIHHYNRAKISPVAVD*FFSLFF
Trigger: GAAAAATAAACTGAAGAAGCAGTCTACAGCTACGGG...TGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR GCA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACCCCGTAGCTGTAGACTaGTTCTTCAGTTTATTTTTC +
Preference number: 4 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYPVAVD*FFSLFF
Trigger: GAAAAATAAACTGAAGAAGCAGTCTACAGCTACGGG...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp AAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATACGACCATCGATAAACTaGTTAAAAAGCTGGAGGTTA +
Preference number: 4 (lower is better)
Translates to: KQNALQVKTIHHYNRAKIRPSIN*LKSWRL
Trigger: TAACCTCCAGCTTTTTAAGCAGTTTATCGATGGTCG...TATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR GCA 90 bp CAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCACGACCATCGATAAACTaGTTAAAAAGCTGGAGGTTA +
Preference number: 4 (lower is better)
Translates to: QNALQVKTIHHYNRAKISRPSIN*LKSWRL
Trigger: TAACCTCCAGCTTTTTAAGCAGTTTATCGATGGTCG...TGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR GCA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGCTTCAGAAGATAACTTaGTTGCTCTTTCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: SRDYVSYFISHILSYCTLLQKIT*LLFQCH
Trigger: ATGACATTGAAAGAGCAAGCAAGTTATCTTCTGAAG...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACGATCTGAGCTGTGTGTaGTCAATGTATCAAGAATCT +
Preference number: 4 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYDLSCV*SMYQES
Trigger: AGATTCTTGATACATTGAGCACACACAGCTCAGATC...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTTCCAAGAGAGGAGCATaGTACAATTTATCTGACAGT +
Preference number: 4 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFSKRGA*YNLSDS
Trigger: ACTGTCAGATAAATTGTAGCATGCTCCTCTCTTGGA...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CCA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATAAGGAGTATTTGCCTTTaGTACTGGGTGGTTATACAG +
Preference number: 4 (lower is better)
Translates to: QILKNMTLRHLPEKQMYIRSICL*YWVVIQ
Trigger: CTGTATAACCACCCAGTACCAAAGGCAAATACTCCT...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CCA 90 bp AAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATAAACTGCTTAAAAAGCTaGAGGTTAATGGCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: KQNALQVKTIHHYNRAKINCLKS*RLMAVS
Trigger: GGAAACTGCCATTAACCTCCAGCTTTTTAAGCAGTT...TATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CCA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACAACTGCTTAAAAAGCTaGAGGTTAATGGCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYNCLKS*RLMAVS
Trigger: GGAAACTGCCATTAACCTCCAGCTTTTTAAGCAGTT...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620048.6
3UTR CAA 72 bp CAGAAGCTTCTTCACCATCTTCAGAAGATAACTTGCTaGCTCTTTCAATGTCATCATCATCTTCATCATCAT +
Preference number: 4 (lower is better)
Translates to: QKLLHHLQKITC*LFQCHHHLHHH
Trigger: ATGATGATGAAGATGATGATGACATTGAAAGAGCAAGCAAGTTATCTTCTGAAGATGGTGAAGAAGCTTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR TCA 90 bp CAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAAAAAGCCACCTGAAGTaGTCTCTTCTTCAAATACAT +
Preference number: 4 (lower is better)
Translates to: QNALQVKTIHHYNRAKISKSHLK*SLLQIH
Trigger: ATGTATTTGAAGAAGAGATCACTTCAGGTGGCTTTT...TGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR TCA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATACAGTCCAATATCTTCTaGAGTCTCTTTGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: QILKNMTLRHLPEKQMYIQSNIF*SLFGFF
Trigger: AAAGAAGCCAAAGAGACTTCAGAAGATATTGGACTG...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACCTCGAAATGAACAAGTaGGAAAAATGTTGCAAATGC +
Preference number: 4 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYLEMNK*EKCCKC
Trigger: GCATTTGCAACATTTTTCTCACTTGTTCATTTCGAG...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR TCA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATAACTAAAAACCAAATTTaGCCCATGCTACACTCACAG +
Preference number: 4 (lower is better)
Translates to: QILKNMTLRHLPEKQMYITKNQI*PMLHSQ
Trigger: CTGTGAGTGTAGCATGGGTCAAATTTGGTTTTTAGT...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp CAAAATGTCTCCATAGAAGCTTGGATGCAAGATTTAAGTTTGGTTTCCATTTGTATTTACAGGAGTATTTaGCTTTGGTACTGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: QNVSIEAWMQDLSLVSICIYRSI*LWYWVV
Trigger: AACCACCCAGTACCAAAGGCAAATACTCCTGTAAAT...ACAAATGGAAACCAAACTTAAATCTTGCATCCAAGCTTCTATGGAGACATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR GCA 90 bp AAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGGGGATGTATATGTGTTaGCAATACATTGGGTATAGA +
Preference number: 4 (lower is better)
Translates to: KMLCKSRLYTTTIVQKYQGMYMC*QYIGYR
Trigger: TCTATACCCAATGTATTGGCAACACATATACATCCC...CTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR GCA 90 bp TATGACATAATGACACTACTTCATGGAGCAGTCCAATATCTTCTGAAGTCTCTTGGGATGTATATGTGTTaGCAATACATTGGGTATAGA +
Preference number: 4 (lower is better)
Translates to: YDIMTLLHGAVQYLLKSLGMYMC*QYIGYR
Trigger: TCTATACCCAATGTATTGGCAACACATATACATCCC...AAGAGACTTCAGAAGATATTGGACTGCTCCATGAAGTAGTGTCATTATGTCATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR GCA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATACGACCATCGATAAACTaGTTAAAAAGCTGGAGGTTA +
Preference number: 4 (lower is better)
Translates to: QILKNMTLRHLPEKQMYIRPSIN*LKSWRL
Trigger: TAACCTCCAGCTTTTTAAGCAGTTTATCGATGGTCG...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGGCAGGTTTTAAATTCTaGCTTGTCCTAAACATCATA +
Preference number: 4 (lower is better)
Translates to: KAYRETENSLECLICKQKAGFKF*LVLNII
Trigger: TATGATGTTTAGGACAAGGCAGAATTTAAAACCTGC...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CCA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTAATGACACTACTTCATaGAGCAGTCCAATATCTTCT +
Preference number: 4 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFNDTTS*SSPISS
Trigger: AGAAGATATTGGACTGCTCCATGAAGTAGTGTCATT...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CCA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTGTCTCCATAGAAGCTTaGATGCAAGATTTAAGTTTG +
Preference number: 4 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFVSIEA*MQDLSL
Trigger: CAAACTTAAATCTTGCATCCAAGCTTCTATGGAGAC...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTGTTTTTACAGATATCTaGTACCAAGACGAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFVFTDI*YQDEQK
Trigger: TTTTTGCTCGTCTTGGTAGCAGATATCTGTAAAAAC...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATAAAATTCCCAAAGCGATaGTTTTATACACATCTTCCC +
Preference number: 4 (lower is better)
Translates to: QILKNMTLRHLPEKQMYIKFPKR*FYTHLP
Trigger: GGGAAGATGTGTATAAAAGCATCGCTTTGGGAATTT...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CCA 90 bp CAAAATGTCTCCATAGAAGCTTGGATGCAAGATTTAAGTTTGGTTTCCATTTGTAGATCATCTGAAATCTaGCTTAGTGTTTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: QNVSIEAWMQDLSLVSICRSSEI*LSVSLF
Trigger: AAAGAGGGAAACACTAAGCCAGATTTCAGATGATCT...ACAAATGGAAACCAAACTTAAATCTTGCATCCAAGCTTCTATGGAGACATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CCA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATAAGATCATCTGAAATCTaGCTTAGTGTTTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: QILKNMTLRHLPEKQMYIRSSEI*LSVSLF
Trigger: AAAGAGGGAAACACTAAGCCAGATTTCAGATGATCT...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CCA 90 bp CAAAATGTCTCCATAGAAGCTTGGATGCAAGATTTAAGTTTGGTTTCCATTTGTTTAAGCACCAAACACTaGGAAATCTCATGGTCAATA +
Preference number: 4 (lower is better)
Translates to: QNVSIEAWMQDLSLVSICLSTKH*EISWSI
Trigger: TATTGACCATGAGATTTCCCAGTGTTTGGTGCTTAA...ACAAATGGAAACCAAACTTAAATCTTGCATCCAAGCTTCTATGGAGACATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CCA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTTACCCTGCATATGACTaGTACAAAAAGTCAATGAAT +
Preference number: 4 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFYPAYD*YKKSMN
Trigger: ATTCATTGACTTTTTGTACCAGTCATATGCAGGGTA...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR GCA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATATCATCAGCATACAAATaGCATTTTGATTTAGGTGGT +
Preference number: 4 (lower is better)
Translates to: QILKNMTLRHLPEKQMYISSAYK*HFDLGG
Trigger: ACCACCTAAATCAAAATGGCATTTGTATGCTGATGA...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CCA 90 bp CAAAATGTCTCCATAGAAGCTTGGATGCAAGATTTAAGTTTGGTTTCCATTTGTTACTGGTTATGTGCATaGGTTACATATGCATTCTTA +
Preference number: 4 (lower is better)
Translates to: QNVSIEAWMQDLSLVSICYWLCA*VTYAFL
Trigger: TAAGAATGCATATGTAACCCATGCACATAACCAGTA...ACAAATGGAAACCAAACTTAAATCTTGCATCCAAGCTTCTATGGAGACATTTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CCA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATATACTGGTTATGTGCATaGGTTACATATGCATTCTTA +
Preference number: 4 (lower is better)
Translates to: QILKNMTLRHLPEKQMYIYWLCA*VTYAFL
Trigger: TAAGAATGCATATGTAACCCATGCACATAACCAGTA...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS TCA 90 bp GGCGTGGCCGCCGCCCCCGTCTCCGCCGGTAGCCGCCACCAAAGCTaGGGCCTCTCAGTTCCTGCGACCGGGGCCGCCCGCTGCGGCTCC +
Preference number: 5 (lower is better)
Translates to: GVAAAPVSAGSRHQS*GLSVPATGAARCGS
Trigger: GGAGCCGCAGCGGGCGGCCCCGGTCGCAGGAACTGAGAGGCCTCAGCTTTGGTGGCGGCTACCGGCGGAGACGGGGGCGGCGGCCACGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000477581.1
ENST00000620048.6
CDS GCA 90 bp TCGCGCCGTCCCCGCCCACGCCGGCGGCCACACAGGGAAAGAGGCTaGTCACAGCAGCCGTGGCGGCGGGCCCATGTCGGCTGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: SRRPRPRRRPHRERG*SQQPWRRAHVGCAP
Trigger: GGGGGCGCAGCCGACATGGGCCCGCCGCCACGGCTGCTGTGAGCAGCCTCTTTCCCTGTGTGGCCGCCGGCGTGGGCGGGGACGGCGCGA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367396.7
ENST00000468589.5
ENST00000620048.6
CDS CCA 90 bp CCACGCCGGCGGCCACACAGGGAAAGAGGCTGCTCACAGCAGCCGTaGCGGCGGGCCCATGTCGGCTGCGCCCCCGGCACTTCCCCGCCT +
Preference number: 5 (lower is better)
Translates to: PRRRPHRERGCSQQP*RRAHVGCAPGTSPP
Trigger: AGGCGGGGAAGTGCCGGGGGCGCAGCCGACATGGGCCCGCCGCCACGGCTGCTGTGAGCAGCCTCTTTCCCTGTGTGGCCGCCGGCGTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468589.5
ENST00000620048.6
CDS CCA 90 bp TCCCACCCCACCCACCAGAGCCTTTCTGTGACAGCAGCGGTGGCGTaGCCGCCGCCCCCGTCTCCGCCGGTAGCCGCCACCAAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: SHPTHQSLSVTAAVA*PPPPSPPVAATKAE
Trigger: CTCAGCTTTGGTGGCGGCTACCGGCGGAGACGGGGGCGGCGGCCACGCCACCGCTGCTGTCACAGAAAGGCTCTGGTGGGTGGGGTGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468589.5
ENST00000620048.6
CDS CCA 90 bp CTGTCTGGATTTGCCCAGAGCCTTTCTGTGACAGCAGCGGTGGCGTaGCCGCCGCCCCCGTCTCCGCCGGTAGCCGCCACCAAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: LSGFAQSLSVTAAVA*PPPPSPPVAATKAE
Trigger: CTCAGCTTTGGTGGCGGCTACCGGCGGAGACGGGGGCGGCGGCCACGCCACCGCTGCTGTCACAGAAAGGCTCTGGGCAAATCCAGACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477581.1
CDS-3UTR CAA 90 bp GGGAGGTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTACAGCAGGGGTTGCTTaGGTCATTGCTGTGTTGAAC +
Preference number: 5 (lower is better)
Translates to: GRCLPWRALSSCPRFHSATAGVA*VIAVLN
Trigger: GTTCAACACAGCAATGACCAAAGCAACCCCTGCTGT...AGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CAA 90 bp AGGTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTTGGAGAAATCCAAGCTCTTaGCAGCTGCCAGCTTCCCCT +
Preference number: 5 (lower is better)
Translates to: RCLPWRALSSCPRFHSAWRNPSS*QLPASP
Trigger: AGGGGAAGCTGGCAGCTGCAAAGAGCTTGGATTTCT...CCAAGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CAA 90 bp ACAGCTGCCAATTCAGGAGGCCAACTTAATGCCTTGAGTAACAGGTATCAGGCAAGGTTCTGTCTGGATTaGCCTTGGTCCTGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: TAANSGGQLNALSNRYQARFCLD*PWSCSP
Trigger: TGGACTGCAGGACCAAGGCAAATCCAGACAGAACCT...TGCCTGATACCTGTTACTCAAGGCATTAAGTTGGCCTCCTGAATTGGCAGCTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp GGAGGTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTTTGTGTTGCCAATACATaGGGTATAGAAGAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: GGVCHGGHYRLAQDSTLLCVANT*GIEEQL
Trigger: CAGCTGCTCTTCTATACCCAATGTATTGGCAACACA...AAGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CAA 90 bp GATGAATGCCGCCCAAGACCGGGTATAAGCAGATCATCTGAAATCTGGCTTAGTTCCGTACAGCAGGGGTaGCTTTGGTCATTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: DECRPRPGISRSSEIWLSSVQQG*LWSLLC
Trigger: ACACAGCAATGACCAAAGCAACCCCTGCTGTACGGA...ACTAAGCCAGATTTCAGATGATCTGCTTATACCCGGTCTTGGGCGGCATTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CAA 90 bp GGAGGTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTTTCAGGACGGTTTATGTaGTATTTGGCTTTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: GGVCHGGHYRLAQDSTLLSGRFM*YLAFLG
Trigger: CCCCAAGAAAGCCAAATACAACATAAACCGTCCTGA...AAGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CAA 90 bp ACAGCTGCCAATTCAGGAGGCCAACTTAATGCCTTGAGTAACAGGTATCAGGCATACAGCTGCAGCATGTaGTTCACATCCACGGCAACA +
Preference number: 5 (lower is better)
Translates to: TAANSGGQLNALSNRYQAYSCSM*FTSTAT
Trigger: TGTTGCCGTGGATGTGAACAACATGCTGCAGCTGTA...TGCCTGATACCTGTTACTCAAGGCATTAAGTTGGCCTCCTGAATTGGCAGCTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp ACAGCTGCCAATTCAGGAGGCCAACTTAATGCCTTGAGTAACAGGTATCAGGCACCGAGACCACATCACTaGGTAGGTTGTTCAAGTCAC +
Preference number: 5 (lower is better)
Translates to: TAANSGGQLNALSNRYQAPRPHH*VGCSSH
Trigger: GTGACTTGAACAACCTACCAAGTGATGTGGTCTCGG...TGCCTGATACCTGTTACTCAAGGCATTAAGTTGGCCTCCTGAATTGGCAGCTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp GATGAATGCCGCCCAAGACCGGGTATAAGCAGATCATCTGAAATCTGGCTTAGTCCGAGACCACATCACTaGGTAGGTTGTTCAAGTCAC +
Preference number: 5 (lower is better)
Translates to: DECRPRPGISRSSEIWLSPRPHH*VGCSSH
Trigger: GTGACTTGAACAACCTACCAAGTGATGTGGTCTCGG...ACTAAGCCAGATTTCAGATGATCTGCTTATACCCGGTCTTGGGCGGCATTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS TCA 90 bp AAGCTGGAGGTTAATGGCAGTTTCCAGGAACTGTTTCATCACGCTTaGGCGGTGCTTTACAAAACTCTCCTCACAGAAAGTGATGGGCTC +
Preference number: 5 (lower is better)
Translates to: KLEVNGSFQELFHHA*AVLYKTLLTESDGL
Trigger: GAGCCCATCACTTTCTGTGAGGAGAGTTTTGTAAAGCACCGCTCAAGCGTGATGAAACAGTTCCTGGAAACTGCCATTAACCTCCAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235453.8
ENST00000367396.7
ENST00000620048.6
CDS GCA 90 bp GCTCTAAGAAAGGCCCTAGCTACTCCATCACCCGTAGCTGTAGACTaGTTCTTCAGTTTATTTTTCAAGGCCGAGACCACATCACTTGGT +
Preference number: 5 (lower is better)
Translates to: ALRKALATPSPVAVD*FFSLFFKAETTSLG
Trigger: ACCAAGTGATGTGGTCTCGGCCTTGAAAAATAAACTGAAGAAGCAGTCTACAGCTACGGGTGATGGAGTAGCTAGGGCCTTTCTTAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000235453.8
ENST00000294737.11
ENST00000367396.7
ENST00000620048.6
CDS GCA 90 bp TTTGTATCTCAGTGCATCTCTGTAGGATCCAAACAAAGCAGCCTGTaGTCTAAGAAAGGCCCTAGCTACTCCATCACCCGTAGCTGTAGA +
Preference number: 5 (lower is better)
Translates to: FVSQCISVGSKQSSL*SKKGPSYSITRSCR
Trigger: TCTACAGCTACGGGTGATGGAGTAGCTAGGGCCTTTCTTAGAGCACAGGCTGCTTTGTTTGGATCCTACAGAGATGCACTGAGATACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000235453.8
ENST00000294737.11
ENST00000367396.7
ENST00000620048.6
CDS-3UTR CAA 90 bp TTTCCAGCAATATTAAGAGATTATCGAGGCCAACAGCTGCCAATTCAGGAGGCCTACAGCTGCAGCATGTaGTTCACATCCACGGCAACA +
Preference number: 5 (lower is better)
Translates to: FPAILRDYRGQQLPIQEAYSCSM*FTSTAT
Trigger: TGTTGCCGTGGATGTGAACAACATGCTGCAGCTGTA...GGCCTCCTGAATTGGCAGCTGTTGGCCTCGATAATCTCTTAATATTGCTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp GGAGGTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTTACATCACTTGGTAGGTaGTTCAAGTCACTAAATGGT +
Preference number: 5 (lower is better)
Translates to: GGVCHGGHYRLAQDSTLLTSLGR*FKSLNG
Trigger: ACCATTTAGTGACTTGAACAACCTACCAAGTGATGT...AAGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CAA 90 bp ACAGCTGCCAATTCAGGAGGCCAACTTAATGCCTTGAGTAACAGGTATCAGGCAGGCCAACTTAATGCCTaGAGTAACAGGTATCAGGCA +
Preference number: 5 (lower is better)
Translates to: TAANSGGQLNALSNRYQAGQLNA*SNRYQA
Trigger: TGCCTGATACCTGTTACTCAAGGCATTAAGTTGGCC...TGCCTGATACCTGTTACTCAAGGCATTAAGTTGGCCTCCTGAATTGGCAGCTGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp GGGAGGTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTAATGTTCAAGCTTTGTaGGAAGTCAGATGTCATATG +
Preference number: 5 (lower is better)
Translates to: GRCLPWRALSSCPRFHSANVQAL*EVRCHM
Trigger: CATATGACATCTGACTTCCAACAAAGCTTGAACATT...AGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS GCA 90 bp TGCAAATTTATATGCTGTCCGTACAGCAGGGGTTGCTTTGGTCATTaGTGTGTTGAACAGTGCACCTCCTTTCTTGACTGTATGCACCCA +
Preference number: 5 (lower is better)
Translates to: CKFICCPYSRGCFGH*CVEQCTSFLDCMHP
Trigger: TGGGTGCATACAGTCAAGAAAGGAGGTGCACTGTTCAACACAGCAATGACCAAAGCAACCCCTGCTGTACGGACAGCATATAAATTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS-3UTR CAA 90 bp AGGTGTTTGCCATGGAGGGCACTATCGTCTTGCCCAAGATTCCACTCTGCTTGGGTTAAAGTGCTTAATTaGCTCGAGATAATCACGATG +
Preference number: 5 (lower is better)
Translates to: RCLPWRALSSCPRFHSAWVKVLN*LEIITM
Trigger: CATCGTGATTATCTCGAGCAAATTAAGCACTTTAAC...CCAAGCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTCCATGGCAAACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CAA 90 bp ATTTCCAGCAATATTAAGAGATTATCGAGGCCAACAGCTGCCAATTCAGGAGGCCCGAGACCACATCACTaGGTAGGTTGTTCAAGTCAC +
Preference number: 5 (lower is better)
Translates to: ISSNIKRLSRPTAANSGGPRPHH*VGCSSH
Trigger: GTGACTTGAACAACCTACCAAGTGATGTGGTCTCGG...GCCTCCTGAATTGGCAGCTGTTGGCCTCGATAATCTCTTAATATTGCTGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS GCA 90 bp GTTAAAGTGCTTAATTTGCTCGAGATAATCACGATGCGCCTTTCATaGAGCATACTGGCATACAGCTGCAGCATGTTGTTCACATCCACG +
Preference number: 5 (lower is better)
Translates to: VKVLNLLEIITMRLS*SILAYSCSMLFTST
Trigger: CGTGGATGTGAACAACATGCTGCAGCTGTATGCCAGTATGCTGCATGAAAGGCGCATCGTGATTATCTCGAGCAAATTAAGCACTTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000235453.8
ENST00000294737.11
ENST00000367396.7
ENST00000496935.1
ENST00000620048.6
CDS GCA 90 bp TACAAATTTATATGCTGTCCGTACAGCAGGGGTTGCTTTGGTCATTaGTGTGTTGAACAGTGCACCTCCTTTCTTGACTGTATGCACCCA +
Preference number: 5 (lower is better)
Translates to: YKFICCPYSRGCFGH*CVEQCTSFLDCMHP
Trigger: TGGGTGCATACAGTCAAGAAAGGAGGTGCACTGTTCAACACAGCAATGACCAAAGCAACCCCTGCTGTACGGACAGCATATAAATTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463124.1
CDS-3UTR CAA 90 bp ATTTCCAGCAATATTAAGAGATTATCGAGGCCAACAGCTGCCAATTCAGGAGGCGGATGCATAAACAAATaGTGCCTCCTGACGTCAGTC +
Preference number: 5 (lower is better)
Translates to: ISSNIKRLSRPTAANSGGGCINK*CLLTSV
Trigger: GACTGACGTCAGGAGGCACAATTTGTTTATGCATCC...GCCTCCTGAATTGGCAGCTGTTGGCCTCGATAATCTCTTAATATTGCTGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp GATGAATGCCGCCCAAGACCGGGTATAAGCAGATCATCTGAAATCTGGCTTAGTAATTTACAGGAGTATTaGCCTTTGGTACTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: DECRPRPGISRSSEIWLSNLQEY*PLVLGG
Trigger: ACCACCCAGTACCAAAGGCAAATACTCCTGTAAATT...ACTAAGCCAGATTTCAGATGATCTGCTTATACCCGGTCTTGGGCGGCATTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CAA 90 bp ATTTCCAGCAATATTAAGAGATTATCGAGGCCAACAGCTGCCAATTCAGGAGGCTACTCTCGGGTATTGTaGGGAGTCCAGTTACATCAG +
Preference number: 5 (lower is better)
Translates to: ISSNIKRLSRPTAANSGGYSRVL*GVQLHQ
Trigger: CTGATGTAACTGGACTCCCAACAATACCCGAGAGTA...GCCTCCTGAATTGGCAGCTGTTGGCCTCGATAATCTCTTAATATTGCTGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS GCA 90 bp GAGATAATCACGATGCGCCTTTCATGCAGCATACTGGCATACAGCTaGAGCATGTTGTTCACATCCACGGCAACAAAATATTCTGTAAGA +
Preference number: 5 (lower is better)
Translates to: EIITMRLSCSILAYS*SMLFTSTATKYSVR
Trigger: TCTTACAGAATATTTTGTTGCCGTGGATGTGAACAACATGCTGCAGCTGTATGCCAGTATGCTGCATGAAAGGCGCATCGTGATTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000235453.8
ENST00000294737.11
ENST00000367396.7
ENST00000496935.1
ENST00000620048.6
CDS GCA 90 bp CCACCCAAATACTGGAGGCAGAATGGCTTTATTCTACTATACCTCTaGTTCAAGTGGTTTTATTTCCTCAGAATGCTACACAGCTCCACC +
Preference number: 5 (lower is better)
Translates to: PPKYWRQNGFILLYL*FKWFYFLRMLHSST
Trigger: GGTGGAGCTGTGTAGCATTCTGAGGAAATAAAACCACTTGAAGCAGAGGTATAGTAGAATAAAGCCATTCTGCCTCCAGTATTTGGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468589.5
ENST00000495550.5
CDS-3UTR CAA 90 bp TCAAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAACTGTCTGGATTTGCCTaGGTCCTGCAGTCCATGGTT +
Preference number: 5 (lower is better)
Translates to: SSKMLCKSRLYTTTIVQKLSGFA*VLQSMV
Trigger: AACCATGGACTGCAGGACCAAGGCAAATCCAGACAG...TTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp CAAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATCTGTCTGGATTTGCCTaGGTCCTGCAGTCCATGGTT +
Preference number: 5 (lower is better)
Translates to: QAKCSASQDYTPLQSCKNLSGFA*VLQSMV
Trigger: AACCATGGACTGCAGGACCAAGGCAAATCCAGACAG...ATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp ATTTCCAGCAATATTAAGAGATTATCGAGGCCAACAGCTGCCAATTCAGGAGGCAAAGTGCTGTCCAACTaGATTCTGAGACACCCTTTC +
Preference number: 5 (lower is better)
Translates to: ISSNIKRLSRPTAANSGGKVLSN*ILRHPF
Trigger: GAAAGGGTGTCTCAGAATCAAGTTGGACAGCACTTT...GCCTCCTGAATTGGCAGCTGTTGGCCTCGATAATCTCTTAATATTGCTGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp CATAGAGATAAGCAGAAGCTTCTTCACCATCTTCAGAAGATAACTTGCTTGCTCTACAGCTGCAGCATGTaGTTCACATCCACGGCAACA +
Preference number: 5 (lower is better)
Translates to: HRDKQKLLHHLQKITCLLYSCSM*FTSTAT
Trigger: TGTTGCCGTGGATGTGAACAACATGCTGCAGCTGTA...GAGCAAGCAAGTTATCTTCTGAAGATGGTGAAGAAGCTTCTGCTTATCTCTATG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CAA 90 bp ATTTCCAGCAATATTAAGAGATTATCGAGGCCAACAGCTGCCAATTCAGGAGGCTGTGTTGCCAATACATaGGGTATAGAAGAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: ISSNIKRLSRPTAANSGGCVANT*GIEEQL
Trigger: CAGCTGCTCTTCTATACCCAATGTATTGGCAACACA...GCCTCCTGAATTGGCAGCTGTTGGCCTCGATAATCTCTTAATATTGCTGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp CACCATCTTCAGAAGATAACTTGCTTGCTCTTTCAATGTCATCATCATCTTCATGAGGGCACTATCGTCTaGCCCAAGATTCCACTCTGC +
Preference number: 5 (lower is better)
Translates to: HHLQKITCLLFQCHHHLHEGTIV*PKIPLC
Trigger: GCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTC...ATGAAGATGATGATGACATTGAAAGAGCAAGCAAGTTATCTTCTGAAGATGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CAA 90 bp TATGACATAATGACACTACTTCATGGAGCAGTCCAATATCTTCTGAAGTCTCTTGTAGGGTCACTCACATaGTCAGCACCGAGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: YDIMTLLHGAVQYLLKSLVGSLT*SAPRCL
Trigger: CAAGCACCTCGGTGCTGACAATGTGAGTGACCCTAC...AAGAGACTTCAGAAGATATTGGACTGCTCCATGAAGTAGTGTCATTATGTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CAA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTGTAGGGTCACTCACATaGTCAGCACCGAGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFVGSLT*SAPRCL
Trigger: CAAGCACCTCGGTGCTGACAATGTGAGTGACCCTAC...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp TATGACATAATGACACTACTTCATGGAGCAGTCCAATATCTTCTGAAGTCTCTTCTGTCTGGATTTGCCTaGGTCCTGCAGTCCATGGTT +
Preference number: 5 (lower is better)
Translates to: YDIMTLLHGAVQYLLKSLLSGFA*VLQSMV
Trigger: AACCATGGACTGCAGGACCAAGGCAAATCCAGACAG...AAGAGACTTCAGAAGATATTGGACTGCTCCATGAAGTAGTGTCATTATGTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CAA 90 bp AAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGCAATCAGGTATGGCATaGGGGCACAGCAGTAGTCCA +
Preference number: 5 (lower is better)
Translates to: KMLCKSRLYTTTIVQKYQQSGMA*GHSSSP
Trigger: TGGACTACTGCTGTGCCCCAATGCCATACCTGATTG...CTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp TATGACATAATGACACTACTTCATGGAGCAGTCCAATATCTTCTGAAGTCTCTTCAATCAGGTATGGCATaGGGGCACAGCAGTAGTCCA +
Preference number: 5 (lower is better)
Translates to: YDIMTLLHGAVQYLLKSLQSGMA*GHSSSP
Trigger: TGGACTACTGCTGTGCCCCAATGCCATACCTGATTG...AAGAGACTTCAGAAGATATTGGACTGCTCCATGAAGTAGTGTCATTATGTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CAA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACCAATCAGGTATGGCATaGGGGCACAGCAGTAGTCCA +
Preference number: 5 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYQSGMA*GHSSSP
Trigger: TGGACTACTGCTGTGCCCCAATGCCATACCTGATTG...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGCCGAGACCACATCACTaGGTAGGTTGTTCAAGTCAC +
Preference number: 5 (lower is better)
Translates to: KAYRETENSLECLICKQKPRPHH*VGCSSH
Trigger: GTGACTTGAACAACCTACCAAGTGATGTGGTCTCGG...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS-3UTR CAA 90 bp CACCATCTTCAGAAGATAACTTGCTTGCTCTTTCAATGTCATCATCATCTTCATCCTCGGGTTCCAGGTTaGTATCTCAGTGCATCTCTG +
Preference number: 5 (lower is better)
Translates to: HHLQKITCLLFQCHHHLHPRVPG*YLSASL
Trigger: CAGAGATGCACTGAGATACAAACCTGGAACCCGAGG...ATGAAGATGATGATGACATTGAAAGAGCAAGCAAGTTATCTTCTGAAGATGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CAA 90 bp CATAGAGATAAGCAGAAGCTTCTTCACCATCTTCAGAAGATAACTTGCTTGCTCTTGGTCATTGCTGTGTaGAACAGTGCACCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: HRDKQKLLHHLQKITCLLLVIAV*NSAPPF
Trigger: GAAAGGAGGTGCACTGTTCAACACAGCAATGACCAA...GAGCAAGCAAGTTATCTTCTGAAGATGGTGAAGAAGCTTCTGCTTATCTCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CAA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACTCCGTACAGCAGGGGTaGCTTTGGTCATTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYSVQQG*LWSLLC
Trigger: ACACAGCAATGACCAAAGCAACCCCTGCTGTACGGA...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTAGAAATCCAAGCTCTTaGCAGCTGCCAGCTTCCCCT +
Preference number: 5 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFRNPSS*QLPASP
Trigger: AGGGGAAGCTGGCAGCTGCAAAGAGCTTGGATTTCT...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATAGAGGGCACTATCGTCTaGCCCAAGATTCCACTCTGC +
Preference number: 5 (lower is better)
Translates to: QILKNMTLRHLPEKQMYIEGTIV*PKIPLC
Trigger: GCAGAGTGGAATCTTGGGCAAGACGATAGTGCCCTC...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp GATGAATGCCGCCCAAGACCGGGTATAAGCAGATCATCTGAAATCTGGCTTAGTTGTCTCCATAGAAGCTaGGATGCAAGATTTAAGTTT +
Preference number: 5 (lower is better)
Translates to: DECRPRPGISRSSEIWLSCLHRS*DARFKF
Trigger: AAACTTAAATCTTGCATCCAAGCTTCTATGGAGACA...ACTAAGCCAGATTTCAGATGATCTGCTTATACCCGGTCTTGGGCGGCATTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CAA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGCGGTTTATGTTGTATTaGGCTTTCTTGGGGTGGACC +
Preference number: 5 (lower is better)
Translates to: SRDYVSYFISHILSYCTLRFMLY*AFLGWT
Trigger: GGTCCACCCCAAGAAAGCCAAATACAACATAAACCG...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS CCA 90 bp TACTGGAGGCAGAATGGCTTTATTCTACTATACCTCTGCTTCAAGTaGTTTTATTTCCTCAGAATGCTACACAGCTCCACCTTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: YWRQNGFILLYLCFK*FYFLRMLHSSTLAF
Trigger: AAAAGCCAAGGTGGAGCTGTGTAGCATTCTGAGGAAATAAAACCACTTGAAGCAGAGGTATAGTAGAATAAAGCCATTCTGCCTCCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468589.5
ENST00000495550.5
CDS CCA 90 bp ACACACACACACAACCCTCCGCAAGATCAAAGACCAGAAGAGAACTaGCACTTAATTTATCAGCCTTTACAGACAAAAGACAGTTTTCGT +
Preference number: 5 (lower is better)
Translates to: THTHNPPQDQRPEEN*HLIYQPLQTKDSFR
Trigger: ACGAAAACTGTCTTTTGTCTGTAAAGGCTGATAAATTAAGTGCCAGTTCTCTTCTGGTCTTTGATCTTGCGGAGGGTTGTGTGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496935.1
CDS-3UTR CAA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATACTGTCTGGATTTGCCTaGGTCCTGCAGTCCATGGTT +
Preference number: 5 (lower is better)
Translates to: QILKNMTLRHLPEKQMYILSGFA*VLQSMV
Trigger: AACCATGGACTGCAGGACCAAGGCAAATCCAGACAG...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGTACTCTCGGGTATTGTaGGGAGTCCAGTTACATCAG +
Preference number: 5 (lower is better)
Translates to: KAYRETENSLECLICKQKYSRVL*GVQLHQ
Trigger: CTGATGTAACTGGACTCCCAACAATACCCGAGAGTA...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS-3UTR CAA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACTACAGCTGCAGCATGTaGTTCACATCCACGGCAACA +
Preference number: 5 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYYSCSM*FTSTAT
Trigger: TGTTGCCGTGGATGTGAACAACATGCTGCAGCTGTA...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGTGTGTTGCCAATACATaGGGTATAGAAGAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: SRDYVSYFISHILSYCTLCVANT*GIEEQL
Trigger: CAGCTGCTCTTCTATACCCAATGTATTGGCAACACA...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp ATTTCCAGCAATATTAAGAGATTATCGAGGCCAACAGCTGCCAATTCAGGAGGCACATCACTTGGTAGGTaGTTCAAGTCACTAAATGGT +
Preference number: 5 (lower is better)
Translates to: ISSNIKRLSRPTAANSGGTSLGR*FKSLNG
Trigger: ACCATTTAGTGACTTGAACAACCTACCAAGTGATGT...GCCTCCTGAATTGGCAGCTGTTGGCCTCGATAATCTCTTAATATTGCTGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp AAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGATGGGCTCACCAGGTTaGTATCTCAGTGCATCTCTG +
Preference number: 5 (lower is better)
Translates to: KMLCKSRLYTTTIVQKYQMGSPG*YLSASL
Trigger: CAGAGATGCACTGAGATACAAACCTGGTGAGCCCAT...CTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp AAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATAATGGGCTCACCAGGTTaGTATCTCAGTGCATCTCTG +
Preference number: 5 (lower is better)
Translates to: KQNALQVKTIHHYNRAKIMGSPG*YLSASL
Trigger: CAGAGATGCACTGAGATACAAACCTGGTGAGCCCAT...TATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTATGGGCTCACCAGGTTaGTATCTCAGTGCATCTCTG +
Preference number: 5 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFMGSPG*YLSASL
Trigger: CAGAGATGCACTGAGATACAAACCTGGTGAGCCCAT...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp GCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCGGCCAACTTAATGCCTaGAGTAACAGGTATCAGGCA +
Preference number: 5 (lower is better)
Translates to: AKCSASQDYTPLQSCKNIGQLNA*SNRYQA
Trigger: TGCCTGATACCTGTTACTCAAGGCATTAAGTTGGCC...GATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGCGGTTTATGTTGTATTaGGCTTTCTTGGGGTGGACC +
Preference number: 5 (lower is better)
Translates to: KAYRETENSLECLICKQKRFMLY*AFLGWT
Trigger: GGTCCACCCCAAGAAAGCCAAATACAACATAAACCG...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS-3UTR CAA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGCACAGTGTTCTCCTCTaGATCAGGAGTCTACTTGTT +
Preference number: 5 (lower is better)
Translates to: SRDYVSYFISHILSYCTLHSVLL*IRSLLV
Trigger: AACAAGTAGACTCCTGATCAAGAGGAGAACACTGTG...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGCAGAAGGATGGTGACTaGACATGTGATGCACTAAAC +
Preference number: 5 (lower is better)
Translates to: SRDYVSYFISHILSYCTLQKDGD*TCDALN
Trigger: GTTTAGTGCATCACATGTCAAGTCACCATCCTTCTG...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGAAAGTGCTGTCCAACTaGATTCTGAGACACCCTTTC +
Preference number: 5 (lower is better)
Translates to: KAYRETENSLECLICKQKKVLSN*ILRHPF
Trigger: GAAAGGGTGTCTCAGAATCAAGTTGGACAGCACTTT...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS-3UTR CAA 90 bp CACCATCTTCAGAAGATAACTTGCTTGCTCTTTCAATGTCATCATCATCTTCATGGATGCATAAACAAATaGTGCCTCCTGACGTCAGTC +
Preference number: 5 (lower is better)
Translates to: HHLQKITCLLFQCHHHLHGCINK*CLLTSV
Trigger: GACTGACGTCAGGAGGCACAATTTGTTTATGCATCC...ATGAAGATGATGATGACATTGAAAGAGCAAGCAAGTTATCTTCTGAAGATGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CAA 90 bp AAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATAGGATGCATAAACAAATaGTGCCTCCTGACGTCAGTC +
Preference number: 5 (lower is better)
Translates to: KQNALQVKTIHHYNRAKIGCINK*CLLTSV
Trigger: GACTGACGTCAGGAGGCACAATTTGTTTATGCATCC...TATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTGGATGCATAAACAAATaGTGCCTCCTGACGTCAGTC +
Preference number: 5 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFGCINK*CLLTSV
Trigger: GACTGACGTCAGGAGGCACAATTTGTTTATGCATCC...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp TCAAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAACAGGAGTATTTGCCTTaGGTACTGGGTGGTTATACA +
Preference number: 5 (lower is better)
Translates to: SSKMLCKSRLYTTTIVQKQEYLP*VLGGYT
Trigger: TGTATAACCACCCAGTACCAAAGGCAAATACTCCTG...TTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp AAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATACTCTCGGGTATTGTaGGGAGTCCAGTTACATCAG +
Preference number: 5 (lower is better)
Translates to: KQNALQVKTIHHYNRAKIYSRVL*GVQLHQ
Trigger: CTGATGTAACTGGACTCCCAACAATACCCGAGAGTA...TATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp GCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGTTTGTTTCTACTCTCGGGTATaGTTGGGAGTCCAGTTACAT +
Preference number: 5 (lower is better)
Translates to: ALQVKTIHHYNRAKISVCFYSRV*LGVQLH
Trigger: ATGTAACTGGACTCCCAACAATACCCGAGAGTAGAA...ACAAACTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGTTCTACTCTCGGGTATaGTTGGGAGTCCAGTTACAT +
Preference number: 5 (lower is better)
Translates to: KAYRETENSLECLICKQKFYSRV*LGVQLH
Trigger: ATGTAACTGGACTCCCAACAATACCCGAGAGTAGAA...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS-3UTR CAA 90 bp ATTTCCAGCAATATTAAGAGATTATCGAGGCCAACAGCTGCCAATTCAGGAGGCGTTAAAGTGCTTAATTaGCTCGAGATAATCACGATG +
Preference number: 5 (lower is better)
Translates to: ISSNIKRLSRPTAANSGGVKVLN*LEIITM
Trigger: CATCGTGATTATCTCGAGCAAATTAAGCACTTTAAC...GCCTCCTGAATTGGCAGCTGTTGGCCTCGATAATCTCTTAATATTGCTGGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp CAAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATACTGTTTCATCACGCTaGAGCGGTGCTTTACAAAAC +
Preference number: 5 (lower is better)
Translates to: QAKCSASQDYTPLQSCKNTVSSR*SGALQN
Trigger: GTTTTGTAAAGCACCGCTCAAGCGTGATGAAACAGT...ATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGACTGTTTCATCACGCTaGAGCGGTGCTTTACAAAAC +
Preference number: 5 (lower is better)
Translates to: KAYRETENSLECLICKQKTVSSR*SGALQN
Trigger: GTTTTGTAAAGCACCGCTCAAGCGTGATGAAACAGT...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp CACCATCTTCAGAAGATAACTTGCTTGCTCTTTCAATGTCATCATCATCTTCATAGTGCACCTCCTTTCTaGACTGTATGCACCCATTGT +
Preference number: 5 (lower is better)
Translates to: HHLQKITCLLFQCHHHLHSAPPF*TVCTHC
Trigger: ACAATGGGTGCATACAGTCAAGAAAGGAGGTGCACT...ATGAAGATGATGATGACATTGAAAGAGCAAGCAAGTTATCTTCTGAAGATGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CAA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACTTGGTCATTGCTGTGTaGAACAGTGCACCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYLVIAV*NSAPPF
Trigger: GAAAGGAGGTGCACTGTTCAACACAGCAATGACCAA...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATAACAGCAGGGGTTGCTTaGGTCATTGCTGTGTTGAAC +
Preference number: 5 (lower is better)
Translates to: QILKNMTLRHLPEKQMYITAGVA*VIAVLN
Trigger: GTTCAACACAGCAATGACCAAAGCAACCCCTGCTGT...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTGCAATTCCTTTTCCTTaGTTCCTTCAGAGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFAIPFP*FLQSRD
Trigger: GTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGC...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGTGGAAAAGTTCAATTTaGAACCCCTCCTGTGGCTTT +
Preference number: 5 (lower is better)
Translates to: SRDYVSYFISHILSYCTLWKSSI*NPSCGF
Trigger: AAAGCCACAGGAGGGGTTCAAAATTGAACTTTTCCA...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp CAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAAAAGTGCTGTCCAACTaGATTCTGAGACACCCTTTC +
Preference number: 5 (lower is better)
Translates to: QNALQVKTIHHYNRAKISKVLSN*ILRHPF
Trigger: GAAAGGGTGTCTCAGAATCAAGTTGGACAGCACTTT...TGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp TATGACATAATGACACTACTTCATGGAGCAGTCCAATATCTTCTGAAGTCTCTTCAGGAGTATTTGCCTTaGGTACTGGGTGGTTATACA +
Preference number: 5 (lower is better)
Translates to: YDIMTLLHGAVQYLLKSLQEYLP*VLGGYT
Trigger: TGTATAACCACCCAGTACCAAAGGCAAATACTCCTG...AAGAGACTTCAGAAGATATTGGACTGCTCCATGAAGTAGTGTCATTATGTCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CAA 90 bp AAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGCAGGAGTATTTGCCTTaGGTACTGGGTGGTTATACA +
Preference number: 5 (lower is better)
Translates to: KMLCKSRLYTTTIVQKYQQEYLP*VLGGYT
Trigger: TGTATAACCACCCAGTACCAAAGGCAAATACTCCTG...CTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTCAGGAGTATTTGCCTTaGGTACTGGGTGGTTATACA +
Preference number: 5 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFQEYLP*VLGGYT
Trigger: TGTATAACCACCCAGTACCAAAGGCAAATACTCCTG...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp CAAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATAATTTACAGGAGTATTaGCCTTTGGTACTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: QAKCSASQDYTPLQSCKNNLQEY*PLVLGG
Trigger: ACCACCCAGTACCAAAGGCAAATACTCCTGTAAATT...ATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp TCAAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAAAATTTACAGGAGTATTaGCCTTTGGTACTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: SSKMLCKSRLYTTTIVQKNLQEY*PLVLGG
Trigger: ACCACCCAGTACCAAAGGCAAATACTCCTGTAAATT...TTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTGA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp CAAAATGTCTCCATAGAAGCTTGGATGCAAGATTTAAGTTTGGTTTCCATTTGTTACTCTCGGGTATTGTaGGGAGTCCAGTTACATCAG +
Preference number: 5 (lower is better)
Translates to: QNVSIEAWMQDLSLVSICYSRVL*GVQLHQ
Trigger: CTGATGTAACTGGACTCCCAACAATACCCGAGAGTA...ACAAATGGAAACCAAACTTAAATCTTGCATCCAAGCTTCTATGGAGACATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS-3UTR CAA 90 bp AAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATTCTACTCTCGGGTATaGTTGGGAGTCCAGTTACAT +
Preference number: 5 (lower is better)
Translates to: KQNALQVKTIHHYNRAKIFYSRV*LGVQLH
Trigger: ATGTAACTGGACTCCCAACAATACCCGAGAGTAGAA...TATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp AAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGTGTGTTGCCAATACATaGGGTATAGAAGAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: KMLCKSRLYTTTIVQKYQCVANT*GIEEQL
Trigger: CAGCTGCTCTTCTATACCCAATGTATTGGCAACACA...CTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp AAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAGACTGTTTCATCACGCTaGAGCGGTGCTTTACAAAAC +
Preference number: 5 (lower is better)
Translates to: KMLCKSRLYTTTIVQKYQTVSSR*SGALQN
Trigger: GTTTTGTAAAGCACCGCTCAAGCGTGATGAAACAGT...CTGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATAAGTGCACCTCCTTTCTaGACTGTATGCACCCATTGT +
Preference number: 5 (lower is better)
Translates to: QILKNMTLRHLPEKQMYISAPPF*TVCTHC
Trigger: ACAATGGGTGCATACAGTCAAGAAAGGAGGTGCACT...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACTGGTATGTCTGCATGTaGCATCCAGAGCTACAGATT +
Preference number: 5 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYWYVCM*HPELQI
Trigger: AATCTGTAGCTCTGGATGCAACATGCAGACATACCA...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS GCA 90 bp CAATACCACAGGATCTCTGCTTCAAGTGGTTTTATTTCCTCAGAATaGTACACAGCTCCACCTTGGCTTTTGGCAATTAAACTAAATAAA +
Preference number: 5 (lower is better)
Translates to: QYHRISASSGFISSE*YTAPPWLLAIKLNK
Trigger: TTTATTTAGTTTAATTGCCAAAAGCCAAGGTGGAGCTGTGTAGCATTCTGAGGAAATAAAACCACTTGAAGCAGAGATCCTGTGGTATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294738.5
CDS-3UTR CAA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTAATTTACAGGAGTATTaGCCTTTGGTACTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFNLQEY*PLVLGG
Trigger: ACCACCCAGTACCAAAGGCAAATACTCCTGTAAATT...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp AGCAGGGACTATGTCAGTTATTTTATTTCCCATATCCTCAGTTACTGTACCCTGCAACAAGGCTCACATTaGAGAAATGAAATAACAGAG +
Preference number: 5 (lower is better)
Translates to: SRDYVSYFISHILSYCTLQQGSH*RNEITE
Trigger: CTCTGTTATTTCATTTCTCAAATGTGAGCCTTGTTG...CAGGGTACAGTAACTGAGGATATGGGAAATAAAATAACTGACATAGTCCCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS TCA 90 bp AATCATATTGTAACTTGTCTTTACCTCCACAAAAGCCACCTGAAGTaGTCTCTTCTTCAAATACATCAGAGAAACCCCTTCCTGCATTTA +
Preference number: 5 (lower is better)
Translates to: NHIVTCLYLHKSHLK*SLLQIHQRNPFLHL
Trigger: TAAATGCAGGAAGGGGTTTCTCTGATGTATTTGAAGAAGAGATCACTTCAGGTGGCTTTTGTGGAGGTAAAGACAAGTTACAATATGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp CAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAATATCAACATCACTTGGTAGGTaGTTCAAGTCACTAAATGGT +
Preference number: 5 (lower is better)
Translates to: QNALQVKTIHHYNRAKISTSLGR*FKSLNG
Trigger: ACCATTTAGTGACTTGAACAACCTACCAAGTGATGT...TGATATTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235453.8
ENST00000367396.7
CDS-3UTR CAA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACACATCACTTGGTAGGTaGTTCAAGTCACTAAATGGT +
Preference number: 5 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYTSLGR*FKSLNG
Trigger: ACCATTTAGTGACTTGAACAACCTACCAAGTGATGT...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGTCTTCAGAAGATAACTaGCTTGCTCTTTCAATGTCA +
Preference number: 5 (lower is better)
Translates to: KAYRETENSLECLICKQKSSEDN*LALSMS
Trigger: TGACATTGAAAGAGCAAGCAAGTTATCTTCTGAAGA...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS-3UTR CAA 90 bp AAGGCATACAGAGAGACTGAAAACTCGTTAGAGTGTCTCATTTGTAAACAGAAGAATGTTCAAGCTTTGTaGGAAGTCAGATGTCATATG +
Preference number: 5 (lower is better)
Translates to: KAYRETENSLECLICKQKNVQAL*EVRCHM
Trigger: CATATGACATCTGACTTCCAACAAAGCTTGAACATT...CTTCTGTTTACAAATGAGACACTCTAACGAGTTTTCAGTCTCTCTGTATGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS-3UTR CAA 90 bp TCAAGCAAAATGCTCTGCAAGTCAAGACTATACACCACTACAATCGTGCAAAAACTGATCTTTCAGAACTaGCTCACAGGCAATAAATAT +
Preference number: 5 (lower is better)
Translates to: SSKMLCKSRLYTTTIVQKLIFQN*LTGNKY
Trigger: ATATTTATTGCCTGTGAGCAAGTTCTGAAAGATCAG...TTTTTGCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367396.7
CDS-3UTR CAA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACCTGATCTTTCAGAACTaGCTCACAGGCAATAAATAT +
Preference number: 5 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYLIFQN*LTGNKY
Trigger: ATATTTATTGCCTGTGAGCAAGTTCTGAAAGATCAG...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp ATTTGCAATTCCTTTTCCTTTGTTCCTTCAGAGCAGGGACTATGTCAGTTATTTTGGAGGAAACTAGATTaGGGGATTCATTTTACATTC +
Preference number: 5 (lower is better)
Translates to: ICNSFSFVPSEQGLCQLFWRKLD*GIHFTF
Trigger: GAATGTAAAATGAATCCCCAAATCTAGTTTCCTCCA...AAATAACTGACATAGTCCCTGCTCTGAAGGAACAAAGGAAAAGGAATTGCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATAAGCATTCTGTTAACATaGCTCTTCAGTACCTTGCTT +
Preference number: 5 (lower is better)
Translates to: QILKNMTLRHLPEKQMYISILLT*LFSTLL
Trigger: AAGCAAGGTACTGAAGAGCAATGTTAACAGAATGCT...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp AAAGAGTCTCTAAATCTGCCCCTTAAATGTGGGTATCTTAGCAGCATAATATACAACCAAAGTGTAGATTaGATAATGGACCTCAACAAG +
Preference number: 5 (lower is better)
Translates to: KESLNLPLKCGYLSSIIYNQSVD*IMDLNK
Trigger: CTTGTTGAGGTCCATTATCAAATCTACACTTTGGTT...GTATATTATGCTGCTAAGATACCCACATTTAAGGGGCAGATTTAGAGACTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS GCA 90 bp TTATTCTACTATACCTCTGCTTCAAGTGGTTTTATTTCCTCAGAATaGTACACAGCTCCACCTTGGCTTTTGGCAATTAAACTAAATAAA +
Preference number: 5 (lower is better)
Translates to: LFYYTSASSGFISSE*YTAPPWLLAIKLNK
Trigger: TTTATTTAGTTTAATTGCCAAAAGCCAAGGTGGAGCTGTGTAGCATTCTGAGGAAATAAAACCACTTGAAGCAGAGGTATAGTAGAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468589.5
ENST00000495550.5
CDS-3UTR CAA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATAGTTAAAGTGCTTAATTaGCTCGAGATAATCACGATG +
Preference number: 5 (lower is better)
Translates to: QILKNMTLRHLPEKQMYIVKVLN*LEIITM
Trigger: CATCGTGATTATCTCGAGCAAATTAAGCACTTTAAC...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATATGTCTCCATAGAAGCTaGGATGCAAGATTTAAGTTT +
Preference number: 5 (lower is better)
Translates to: QILKNMTLRHLPEKQMYICLHRS*DARFKF
Trigger: AAACTTAAATCTTGCATCCAAGCTTCTATGGAGACA...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS-3UTR CAA 90 bp CAAATACTGAAAAACATGACCTTAAGGCATCTGCCAGAAAAACAGATGTACATAGAGAATGAAGGTCTATaGATTATGAGACATTCACAG +
Preference number: 5 (lower is better)
Translates to: QILKNMTLRHLPEKQMYIENEGL*IMRHSQ
Trigger: CTGTGAATGTCTCATAATCAATAGACCTTCATTCTC...TATGTACATCTGTTTTTCTGGCAGATGCCTTAAGGTCATGTTTTTCAGTATTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS TCA 72 bp GCCGCCCCCGTCTCCGCCGGTAGCCGCCACCAAAGCTaGGGCCTCTCAGTTCCTGCGACCGGGGCCGCCCGC +
Preference number: 6 (lower is better)
Translates to: AAPVSAGSRHQS*GLSVPATGAAR
Trigger: GCGGGCGGCCCCGGTCGCAGGAACTGAGAGGCCTCAGCTTTGGTGGCGGCTACCGGCGGAGACGGGGGCGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000477581.1
ENST00000620048.6
CDS GCA 72 bp CCCCGCCCACGCCGGCGGCCACACAGGGAAAGAGGCTaGTCACAGCAGCCGTGGCGGCGGGCCCATGTCGGC +
Preference number: 6 (lower is better)
Translates to: PRPRRRPHRERG*SQQPWRRAHVG
Trigger: GCCGACATGGGCCCGCCGCCACGGCTGCTGTGAGCAGCCTCTTTCCCTGTGTGGCCGCCGGCGTGGGCGGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367396.7
ENST00000468589.5
ENST00000620048.6
CDS GCA 72 bp CGCGCGGGGACGCGCCCAGCGGCTTCACCTGGGCCGTaGGGCTCGCAAGTCGGAGACTGTGGAGGAGGCGGG +
Preference number: 6 (lower is better)
Translates to: RAGTRPAASPGP*GSQVGDCGGGG
Trigger: CCCGCCTCCTCCACAGTCTCCGACTTGCGAGCCGCACGGCCCAGGTGAAGCCGCTGGGCGCGTCCCCGCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477581.1
CDS CCA 72 bp ACCCACCAGAGCCTTTCTGTGACAGCAGCGGTGGCGTaGCCGCCGCCCCCGTCTCCGCCGGTAGCCGCCACC +
Preference number: 6 (lower is better)
Translates to: THQSLSVTAAVA*PPPPSPPVAAT
Trigger: GGTGGCGGCTACCGGCGGAGACGGGGGCGGCGGCCACGCCACCGCTGCTGTCACAGAAAGGCTCTGGTGGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468589.5
ENST00000620048.6
CDS CCA 72 bp CGGCCACACAGGGAAAGAGGCTGCTCACAGCAGCCGTaGCGGCGGGCCCATGTCGGCTGCGCCCCCGGCACT +
Preference number: 6 (lower is better)
Translates to: RPHRERGCSQQP*RRAHVGCAPGT
Trigger: AGTGCCGGGGGCGCAGCCGACATGGGCCCGCCGCCACGGCTGCTGTGAGCAGCCTCTTTCCCTGTGTGGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468589.5
ENST00000620048.6
CDS CCA 72 bp TTTGCCCAGAGCCTTTCTGTGACAGCAGCGGTGGCGTaGCCGCCGCCCCCGTCTCCGCCGGTAGCCGCCACC +
Preference number: 6 (lower is better)
Translates to: FAQSLSVTAAVA*PPPPSPPVAAT
Trigger: GGTGGCGGCTACCGGCGGAGACGGGGGCGGCGGCCACGCCACCGCTGCTGTCACAGAAAGGCTCTGGGCAAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477581.1
CDS GCA 72 bp CGGGCGGCCAGAGGGTGCAGGGGGAGCGCTAGTGCCTaGTGGGATGGCCCACGTACCGCTTTGCCACCTAGC +
Preference number: 6 (lower is better)
Translates to: RAARGCRGSASA*WDGPRTALPPS
Trigger: GCTAGGTGGCAAAGCGGTACGTGGGCCATCCCAGCAGGCACTAGCGCTCCCCCTGCACCCTCTGGCCGCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477581.1
CDS CCA 72 bp GCGGCCAGAGGGTGCAGGGGGAGCGCTAGTGCCTGCTaGGATGGCCCACGTACCGCTTTGCCACCTAGCCAG +
Preference number: 6 (lower is better)
Translates to: AARGCRGSASAC*DGPRTALPPSQ
Trigger: CTGGCTAGGTGGCAAAGCGGTACGTGGGCCATCCCAGCAGGCACTAGCGCTCCCCCTGCACCCTCTGGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477581.1
CDS GCA 72 bp TCAGTTCCTGCGACCGGGGCCGCCCGCTGCGGCTCCTaGACCTTCTTGCAAATCAGGAAGTCGCCGGGAGGG +
Preference number: 6 (lower is better)
Translates to: SVPATGAARCGS*TFLQIRKSPGG
Trigger: CCCTCCCGGCGACTTCCTGATTTGCAAGAAGGTGCAGGAGCCGCAGCGGGCGGCCCCGGTCGCAGGAACTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477581.1
CDS CAA 72 bp AGCGCTAGTGCCTGCTGGGATGGCCCACGTACCGCTTaGCCACCTAGCCAGAAAGGCAAGGTGCCCCCTGTG +
Preference number: 6 (lower is better)
Translates to: SASACWDGPRTA*PPSQKGKVPPV
Trigger: CACAGGGGGCACCTTGCCTTTCTGGCTAGGTGGCAAAGCGGTACGTGGGCCATCCCAGCAGGCACTAGCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477581.1
CDS CCA 72 bp AGGTTCTGTCTGGATTTGCCTTGGTCCTGCAGTCCATaGTTACATGTCGGTGTGGGGCTGTCCGTCCGGCCC +
Preference number: 6 (lower is better)
Translates to: RFCLDLPWSCSP*LHVGVGLSVRP
Trigger: GGGCCGGACGGACAGCCCCACACCGACATGTAACCATGGACTGCAGGACCAAGGCAAATCCAGACAGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000235453.8
ENST00000294737.11
ENST00000367396.7
ENST00000468589.5
ENST00000620048.6
CDS CCA 72 bp TCTCTCTATGAGGCTGGAGTGTATTCCAATCAGGTATaGCATTGGGGCACAGCAGTAGTCCAGCAGGTGTGG +
Preference number: 6 (lower is better)
Translates to: SLYEAGVYSNQV*HWGTAVVQQVW
Trigger: CCACACCTGCTGGACTACTGCTGTGCCCCAATGCCATACCTGATTGGAATACACTCCAGCCTCATAGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000235453.8
ENST00000294737.11
ENST00000367396.7
ENST00000496935.1
ENST00000620048.6
CDS GCA 72 bp CAGTGCATCTCTGTAGGATCCAAACAAAGCAGCCTGTaGTCTAAGAAAGGCCCTAGCTACTCCATCACCCGT +
Preference number: 6 (lower is better)
Translates to: QCISVGSKQSSL*SKKGPSYSITR
Trigger: ACGGGTGATGGAGTAGCTAGGGCCTTTCTTAGAGCACAGGCTGCTTTGTTTGGATCCTACAGAGATGCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000235453.8
ENST00000294737.11
ENST00000367396.7
ENST00000620048.6
CDS CAA 72 bp GTCCGTACAGCAGGGGTTGCTTTGGTCATTGCTGTGTaGAACAGTGCACCTCCTTTCTTGACTGTATGCACC +
Preference number: 6 (lower is better)
Translates to: VRTAGVALVIAV*NSAPPFLTVCT
Trigger: GGTGCATACAGTCAAGAAAGGAGGTGCACTGTTCAACACAGCAATGACCAAAGCAACCCCTGCTGTACGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294737.11
ENST00000463124.1
ENST00000620048.6
CDS TCA 72 bp CGGGTATTGTTGGGAGTCCAGTTACATCAGGGGCAATaGAGTAGGAATGCGGTACTAGAGCAGGCTGATCTT +
Preference number: 6 (lower is better)
Translates to: RVLLGVQLHQGQ*SRNAVLEQADL
Trigger: AAGATCAGCCTGCTCTAGTACCGCATTCCTACTTCATTGCCCCTGATGTAACTGGACTCCCAACAATACCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367396.7
ENST00000620048.6
CDS TCA 72 bp AGTGCACCTCCTTTCTTGACTGTATGCACCCATTGTTaGTATGACCTCGGGTTCCCTCCACAAAAGCCACCT +
Preference number: 6 (lower is better)
Translates to: SAPPFLTVCTHC*YDLGFPPQKPP
Trigger: AGGTGGCTTTTGTGGAGGGAACCCGAGGTCATATCAACAATGGGTGCATACAGTCAAGAAAGGAGGTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620048.6
CDS GCA 72 bp AAGGCCCTAGCTACTCCATCACCCGTAGCTGTAGACTaGTTCTTCAGTTTATTTTTCAAGGCCGAGACCACA +
Preference number: 6 (lower is better)
Translates to: KALATPSPVAVD*FFSLFFKAETT
Trigger: TGTGGTCTCGGCCTTGAAAAATAAACTGAAGAAGCAGTCTACAGCTACGGGTGATGGAGTAGCTAGGGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000235453.8
ENST00000294737.11
ENST00000367396.7
ENST00000620048.6
CDS GCA 72 bp AGCAGGGGTTGCTTTGGTCATTGCTGTGTTGAACAGTaGACCTCCTTTCTTGACTGTATGCACCCATTGTTG +
Preference number: 6 (lower is better)
Translates to: SRGCFGHCCVEQ*TSFLDCMHPLL
Trigger: CAACAATGGGTGCATACAGTCAAGAAAGGAGGTGCACTGTTCAACACAGCAATGACCAAAGCAACCCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294737.11
ENST00000463124.1
ENST00000620048.6
CDS GCA 72 bp ATATGCTGTCCGTACAGCAGGGGTTGCTTTGGTCATTaGTGTGTTGAACAGTGCACCTCCTTTCTTGACTGT +
Preference number: 6 (lower is better)
Translates to: ICCPYSRGCFGH*CVEQCTSFLDC
Trigger: ACAGTCAAGAAAGGAGGTGCACTGTTCAACACAGCAATGACCAAAGCAACCCCTGCTGTACGGACAGCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294737.11
ENST00000463124.1
ENST00000620048.6
CDS CAA 90 bp GCAGGTGTGGAGGAAGCACTGGGATGTATATGTGTTGCCAATACATaGGGTATAGAAGAGCAGCTGATCCATGGATACAGGCAGTTAAAG +
Preference number: 6 (lower is better)
Translates to: AGVEEALGCICVANT*GIEEQLIHGYRQLK
Trigger: CTTTAACTGCCTGTATCCATGGATCAGCTGCTCTTCTATACCCAATGTATTGGCAACACATATACATCCCAGTGCTTCCTCCACACCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000235453.8
ENST00000294737.11
ENST00000367396.7
ENST00000496935.1
ENST00000620048.6
CDS TCA 72 bp AGTGCACCTCCTTTCTTGACTGTATGCACCCATTGTTaGTATGACCTCGGGTTCCAGGTTTGTATCTCAGTG +
Preference number: 6 (lower is better)
Translates to: SAPPFLTVCTHC*YDLGFQVCISV
Trigger: CACTGAGATACAAACCTGGAACCCGAGGTCATATCAACAATGGGTGCATACAGTCAAGAAAGGAGGTGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294737.11
CDS GCA 72 bp ACGATGCGCCTTTCATGCAGCATACTGGCATACAGCTaGAGCATGTTGTTCACATCCACGGCAACAAAATAT +
Preference number: 6 (lower is better)
Translates to: TMRLSCSILAYS*SMLFTSTATKY
Trigger: ATATTTTGTTGCCGTGGATGTGAACAACATGCTGCAGCTGTATGCCAGTATGCTGCATGAAAGGCGCATCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000235453.8
ENST00000294737.11
ENST00000367396.7
ENST00000496935.1
ENST00000620048.6
CDS GCA 72 bp AGCAGGTGTGGAGGAAGCACTGGGATGTATATGTGTTaGCAATACATTGGGTATAGAAGAGCAGCTGATCCA +
Preference number: 6 (lower is better)
Translates to: SRCGGSTGMYMC*QYIGYRRAADP
Trigger: TGGATCAGCTGCTCTTCTATACCCAATGTATTGGCAACACATATACATCCCAGTGCTTCCTCCACACCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000235453.8
ENST00000294737.11
ENST00000367396.7
ENST00000496935.1
ENST00000620048.6
CDS CAA 72 bp GCAAATTTATATGCTGTCCGTACAGCAGGGGTTGCTTaGGTCATTGCTGTGTTGAACAGTGCACCTCCTTTC +
Preference number: 6 (lower is better)
Translates to: ANLYAVRTAGVA*VIAVLNSAPPF
Trigger: GAAAGGAGGTGCACTGTTCAACACAGCAATGACCAAAGCAACCCCTGCTGTACGGACAGCATATAAATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS GCA 72 bp CTTAATTTGCTCGAGATAATCACGATGCGCCTTTCATaGAGCATACTGGCATACAGCTGCAGCATGTTGTTC +
Preference number: 6 (lower is better)
Translates to: LNLLEIITMRLS*SILAYSCSMLF
Trigger: GAACAACATGCTGCAGCTGTATGCCAGTATGCTGCATGAAAGGCGCATCGTGATTATCTCGAGCAAATTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000235453.8
ENST00000294737.11
ENST00000367396.7
ENST00000496935.1
ENST00000620048.6
CDS GCA 72 bp TTTTGCAAATTTATATGCTGTCCGTACAGCAGGGGTTaGTTTGGTCATTGCTGTGTTGAACAGTGCACCTCC +
Preference number: 6 (lower is better)
Translates to: FCKFICCPYSRG*FGHCCVEQCTS
Trigger: GGAGGTGCACTGTTCAACACAGCAATGACCAAAGCAACCCCTGCTGTACGGACAGCATATAAATTTGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294737.11
ENST00000620048.6
CDS GCA 72 bp ACTTACAAATTTATATGCTGTCCGTACAGCAGGGGTTaGTTTGGTCATTGCTGTGTTGAACAGTGCACCTCC +
Preference number: 6 (lower is better)
Translates to: TYKFICCPYSRG*FGHCCVEQCTS
Trigger: GGAGGTGCACTGTTCAACACAGCAATGACCAAAGCAACCCCTGCTGTACGGACAGCATATAAATTTGTAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463124.1
CDS CAA 72 bp ACAAATTTATATGCTGTCCGTACAGCAGGGGTTGCTTaGGTCATTGCTGTGTTGAACAGTGCACCTCCTTTC +
Preference number: 6 (lower is better)
Translates to: TNLYAVRTAGVA*VIAVLNSAPPF
Trigger: GAAAGGAGGTGCACTGTTCAACACAGCAATGACCAAAGCAACCCCTGCTGTACGGACAGCATATAAATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463124.1
CDS CAA 90 bp ACGATGCGCCTTTCATGCAGCATACTGGCATACAGCTGCAGCATGTaGTTCACATCCACGGCAACAAAATATTCTGTAAGATTTCTACTC +
Preference number: 6 (lower is better)
Translates to: TMRLSCSILAYSCSM*FTSTATKYSVRFLL
Trigger: GAGTAGAAATCTTACAGAATATTTTGTTGCCGTGGATGTGAACAACATGCTGCAGCTGTATGCCAGTATGCTGCATGAAAGGCGCATCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000235453.8
ENST00000294737.11
ENST00000367396.7
ENST00000496935.1
ENST00000620048.6
CDS TCA 72 bp CGGGTATTGTTGGGAGTCCAGTTACATCAGGGGCAATaGAGTAGGAATGCACACTCAAATTTACAGGAGTAT +
Preference number: 6 (lower is better)
Translates to: RVLLGVQLHQGQ*SRNAHSNLQEY
Trigger: ATACTCCTGTAAATTTGAGTGTGCATTCCTACTTCATTGCCCCTGATGTAACTGGACTCCCAACAATACCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000235453.8
ENST00000294737.11
ENST00000422998.1
ENST00000496935.1
CDS CAA 72 bp GAGACACCCTTTCAACGTCAAAGGGAAAACAGAACTTaGGCACACTCTGTAGTATTTCCTGGTCTCCAAAGT +
Preference number: 6 (lower is better)
Translates to: ETPFQRQRENRT*AHSVVFPGLQS
Trigger: ACTTTGGAGACCAGGAAATACTACAGAGTGTGCCAAAGTTCTGTTTTCCCTTTGACGTTGAAAGGGTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000235453.8
ENST00000294737.11
ENST00000294738.5
ENST00000367396.7
ENST00000620048.6
CDS CCA 72 bp CACAACCCTCCGCAAGATCAAAGACCAGAAGAGAACTaGCACTTAATTTATCAGCCTTTACAGACAAAAGAC +
Preference number: 6 (lower is better)
Translates to: HNPPQDQRPEEN*HLIYQPLQTKD
Trigger: GTCTTTTGTCTGTAAAGGCTGATAAATTAAGTGCCAGTTCTCTTCTGGTCTTTGATCTTGCGGAGGGTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496935.1
CDS CAA 90 bp ATTGGCCCCCTTCTTCTTCTTGCCTTCAAAAACTCTCTCATTCTTTaGCAAGACATGCCACTAGGCAGACAGAAATGCCTACTTTGTAAT +
Preference number: 6 (lower is better)
Translates to: IGPLLLLAFKNSLIL*QDMPLGRQKCLLCN
Trigger: ATTACAAAGTAGGCATTTCTGTCTGCCTAGTGGCATGTCTTGCAAAAGAATGAGAGAGTTTTTGAAGGCAAGAAGAAGAAGGGGGCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496935.1
CDS TCA 72 bp TTCAGAGGTCCAGGAGAAAACATATATGTTCACCACTaGATAGCCTTCATACTTACCACATCACTTGGTAGG +
Preference number: 6 (lower is better)
Translates to: FRGPGENIYVHH*IAFILTTSLGR
Trigger: CCTACCAAGTGATGTGGTAAGTATGAAGGCTATTCAGTGGTGAACATATATGTTTTCTCCTGGACCTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496935.1
CDS CCA 72 bp CAGAATGGCTTTATTCTACTATACCTCTGCTTCAAGTaGTTTTATTTCCTCAGAATGCTACACAGCTCCACC +
Preference number: 6 (lower is better)
Translates to: QNGFILLYLCFK*FYFLRMLHSST
Trigger: GGTGGAGCTGTGTAGCATTCTGAGGAAATAAAACCACTTGAAGCAGAGGTATAGTAGAATAAAGCCATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468589.5
ENST00000495550.5
CDS TCA 72 bp AGGAGTATTTGCCTTTGGTACTGGGTGGTTATACAGTaGTCTGAGAGTTTCATTCAAATCATTTTCCAGTTC +
Preference number: 6 (lower is better)
Translates to: RSICLWYWVVIQ*SESFIQIIFQF
Trigger: GAACTGGAAAATGATTTGAATGAAACTCTCAGATCACTGTATAACCACCCAGTACCAAAGGCAAATACTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000235453.8
ENST00000294737.11
ENST00000367396.7
ENST00000422998.1
ENST00000496935.1
ENST00000620048.6
CDS CAA 72 bp TTATTTTTCAAGGCCGAGACCACATCACTTGGTAGGTaGTTCAAGTCACTAAATGGTGATTCTAATGTGTTT +
Preference number: 6 (lower is better)
Translates to: LFFKAETTSLGR*FKSLNGDSNVF
Trigger: AAACACATTAGAATCACCATTTAGTGACTTGAACAACCTACCAAGTGATGTGGTCTCGGCCTTGAAAAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000235453.8
ENST00000294737.11
ENST00000367396.7
ENST00000620048.6